Query 010700
Match_columns 503
No_of_seqs 215 out of 1981
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 12:25:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010700.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010700hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sqr_A Laccase; multicopper ox 100.0 2.5E-88 8.5E-93 718.2 51.5 437 24-502 64-514 (580)
2 1aoz_A Ascorbate oxidase; oxid 100.0 2E-87 7E-92 716.8 50.7 458 26-502 2-495 (552)
3 3t6v_A Laccase; beta barrel, o 100.0 4E-84 1.4E-88 678.6 49.1 428 28-502 5-441 (495)
4 3pxl_A Laccase; 4-copper prote 100.0 6.7E-84 2.3E-88 676.8 48.9 425 28-502 4-441 (499)
5 1zpu_A Iron transport multicop 100.0 2.4E-83 8.3E-88 680.5 49.7 431 26-502 1-451 (534)
6 1v10_A Laccase; multicopper bl 100.0 5E-83 1.7E-87 677.3 45.3 434 22-502 18-461 (521)
7 2q9o_A Laccase-1; multicopper 100.0 3.7E-80 1.3E-84 660.1 50.3 438 23-502 29-491 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 2.1E-80 7.1E-85 655.1 46.3 423 29-502 6-440 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 1.3E-72 4.4E-77 586.6 36.1 378 23-502 12-410 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 1.6E-72 5.5E-77 586.7 27.4 375 26-502 17-407 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 2.7E-70 9.1E-75 579.4 33.1 389 27-502 36-444 (534)
12 2wsd_A Spore coat protein A; o 100.0 1E-69 3.5E-74 574.8 34.2 396 25-500 23-477 (513)
13 3aw5_A Multicopper oxidase; be 100.0 2E-69 6.8E-74 562.5 28.1 358 49-502 28-418 (448)
14 3zx1_A Oxidoreductase, putativ 100.0 1.4E-67 4.7E-72 549.6 36.2 386 20-502 43-451 (481)
15 3gyr_A PHS, phenoxazinone synt 100.0 3.1E-66 1.1E-70 562.9 36.3 416 25-502 30-560 (612)
16 3od3_A Blue copper oxidase CUE 100.0 8.1E-66 2.8E-70 536.0 33.4 389 25-502 15-456 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 2.8E-64 9.5E-69 537.2 38.1 416 25-502 30-560 (612)
18 3g5w_A Multicopper oxidase typ 100.0 2.1E-53 7.1E-58 422.8 31.8 271 26-315 1-278 (318)
19 2zwn_A Two-domain type laccase 100.0 2.7E-52 9.2E-57 419.2 31.5 271 26-315 2-279 (339)
20 2j5w_A Ceruloplasmin, ferroxid 100.0 6.7E-52 2.3E-56 470.7 28.8 396 16-467 10-488 (1065)
21 1kbv_A ANIA, major outer membr 100.0 2E-49 6.7E-54 396.5 29.5 263 22-315 33-309 (327)
22 3gdc_A Multicopper oxidase; be 100.0 3E-47 1E-51 374.0 29.0 235 25-293 32-273 (288)
23 2zoo_A Probable nitrite reduct 100.0 1.2E-45 4.2E-50 384.9 29.3 268 22-315 23-299 (442)
24 3kw8_A Laccase, putative coppe 100.0 6.2E-45 2.1E-49 355.3 25.5 226 22-294 2-251 (276)
25 1mzy_A Copper-containing nitri 100.0 2.2E-44 7.7E-49 361.4 27.3 269 21-315 26-320 (333)
26 1oe1_A Dissimilatory copper-co 100.0 1.4E-44 4.8E-49 363.5 24.3 268 22-315 27-320 (336)
27 3tas_A Small laccase, multi-co 100.0 7.4E-44 2.5E-48 353.7 24.0 228 20-294 6-257 (313)
28 2bw4_A Copper-containing nitri 100.0 2.9E-44 9.7E-49 361.9 20.7 270 21-315 32-326 (340)
29 3t9w_A Small laccase, multi-co 100.0 9.3E-44 3.2E-48 350.3 23.7 228 20-294 22-273 (299)
30 3cg8_A Laccase; oxidoreductase 100.0 1.2E-40 4.2E-45 334.1 25.0 238 24-314 45-307 (343)
31 1sdd_B Coagulation factor V; c 100.0 2.6E-40 8.9E-45 359.8 26.6 248 24-293 3-312 (647)
32 2dv6_A Nitrite reductase; elec 100.0 2.3E-39 7.7E-44 338.4 31.7 259 25-315 161-435 (447)
33 1sdd_A Coagulation factor V; c 100.0 4.2E-42 1.4E-46 340.3 9.0 212 47-293 50-285 (306)
34 2dv6_A Nitrite reductase; elec 100.0 4.9E-40 1.7E-44 343.4 20.5 359 23-502 24-403 (447)
35 2r7e_B Coagulation factor VIII 100.0 6.5E-41 2.2E-45 366.7 12.3 250 23-293 129-441 (770)
36 2r7e_A Coagulation factor VIII 100.0 3.8E-41 1.3E-45 368.1 9.2 244 27-294 46-315 (742)
37 2j5w_A Ceruloplasmin, ferroxid 100.0 3.3E-36 1.1E-40 342.2 15.4 364 44-502 616-1028(1065)
38 2r7e_A Coagulation factor VIII 100.0 2.9E-36 9.9E-41 329.6 7.1 216 54-294 448-697 (742)
39 2zwn_A Two-domain type laccase 99.8 4.3E-18 1.5E-22 170.5 13.8 216 189-502 23-241 (339)
40 2uxt_A Protein SUFI, SUFI; oxi 99.7 1.3E-15 4.4E-20 158.1 21.6 239 27-294 152-427 (451)
41 3g5w_A Multicopper oxidase typ 99.7 5.5E-17 1.9E-21 160.7 10.5 217 190-502 23-240 (318)
42 2xu9_A Laccase; oxidoreductase 99.7 8.5E-16 2.9E-20 159.2 19.2 233 27-294 146-426 (439)
43 3gdc_A Multicopper oxidase; be 99.7 3E-16 1E-20 153.4 12.2 202 189-502 54-258 (288)
44 3cg8_A Laccase; oxidoreductase 99.6 3.3E-16 1.1E-20 156.7 11.2 182 213-502 76-273 (343)
45 3cvb_A Plastocyanin; cupredoxi 99.6 8.3E-17 2.8E-21 132.9 2.8 89 54-146 15-105 (105)
46 1hfu_A Laccase 1; oxidoreducta 99.6 5.9E-14 2E-18 147.8 22.8 261 29-294 143-456 (503)
47 1v10_A Laccase; multicopper bl 99.6 4.3E-14 1.5E-18 149.3 21.4 241 46-294 191-477 (521)
48 3kw8_A Laccase, putative coppe 99.6 5.4E-15 1.9E-19 143.6 12.0 99 49-149 157-268 (276)
49 3zx1_A Oxidoreductase, putativ 99.6 9.6E-14 3.3E-18 144.4 19.0 241 28-293 181-466 (481)
50 3od3_A Blue copper oxidase CUE 99.5 5.6E-13 1.9E-17 138.6 17.8 250 28-293 151-475 (488)
51 3t6v_A Laccase; beta barrel, o 99.5 1.8E-12 6.2E-17 135.6 21.2 243 45-294 167-457 (495)
52 1zpu_A Iron transport multicop 99.5 4.7E-12 1.6E-16 134.0 23.4 231 46-294 167-467 (534)
53 3aw5_A Multicopper oxidase; be 99.5 1.6E-12 5.4E-17 134.7 18.2 231 28-293 138-434 (448)
54 1aoz_A Ascorbate oxidase; oxid 99.5 2.9E-12 9.8E-17 136.5 20.6 217 59-294 205-511 (552)
55 3t9w_A Small laccase, multi-co 99.4 3.1E-13 1.1E-17 132.6 11.5 185 213-502 57-257 (299)
56 3pxl_A Laccase; 4-copper prote 99.4 3.4E-12 1.2E-16 133.5 19.7 243 45-294 165-457 (499)
57 1iby_A Nitrosocyanin; RED copp 99.4 4.6E-13 1.6E-17 111.6 10.5 105 28-146 2-112 (112)
58 2g23_A PHS, phenoxazinone synt 99.4 4.5E-12 1.5E-16 135.3 20.7 232 45-294 253-577 (612)
59 2cal_A Rusticyanin; iron respi 99.4 3.5E-13 1.2E-17 118.6 9.7 98 43-145 47-154 (154)
60 2q9o_A Laccase-1; multicopper 99.4 2.7E-11 9.1E-16 129.0 24.4 246 46-294 195-507 (559)
61 1kbv_A ANIA, major outer membr 99.4 1.3E-12 4.5E-17 129.9 12.7 213 190-500 59-274 (327)
62 2wsd_A Spore coat protein A; o 99.3 9.3E-12 3.2E-16 131.3 15.4 219 45-294 229-496 (513)
63 3abg_A Bilirubin oxidase; clea 99.3 1.1E-11 3.9E-16 130.9 15.7 231 45-294 200-461 (534)
64 1fwx_A Nitrous oxide reductase 99.3 4.8E-12 1.6E-16 133.1 10.3 94 42-148 497-594 (595)
65 2ov0_A Amicyanin; beta-sandwic 99.2 3.5E-11 1.2E-15 98.8 9.9 78 52-145 27-105 (105)
66 1sdd_A Coagulation factor V; c 99.2 2E-12 6.8E-17 127.4 -0.9 98 45-147 200-301 (306)
67 1sdd_B Coagulation factor V; c 99.2 4.9E-11 1.7E-15 129.5 9.7 103 44-148 224-329 (647)
68 3sqr_A Laccase; multicopper ox 99.2 3.9E-09 1.3E-13 112.0 23.7 241 46-294 225-530 (580)
69 2r7e_B Coagulation factor VIII 99.1 9.9E-12 3.4E-16 136.2 3.5 214 212-502 197-426 (770)
70 3tas_A Small laccase, multi-co 99.1 3.5E-10 1.2E-14 111.6 12.8 100 49-149 163-274 (313)
71 2zoo_A Probable nitrite reduct 99.1 4.4E-10 1.5E-14 116.5 13.7 211 190-498 49-262 (442)
72 2gim_A Plastocyanin; beta shee 99.1 1.9E-10 6.5E-15 94.6 8.6 83 57-146 19-106 (106)
73 3gyr_A PHS, phenoxazinone synt 99.1 1.7E-09 5.6E-14 116.9 17.2 234 45-294 253-577 (612)
74 2aan_A Auracyanin A; cupredoxi 99.0 1.2E-09 4E-14 94.5 11.1 90 54-145 31-139 (139)
75 1qhq_A Protein (auracyanin); e 98.9 6.2E-09 2.1E-13 90.0 12.1 92 54-146 29-140 (140)
76 4hci_A Cupredoxin 1; structura 98.9 4.6E-09 1.6E-13 85.3 8.3 79 52-145 22-100 (100)
77 2plt_A Plastocyanin; electron 98.8 4.4E-09 1.5E-13 85.0 5.3 80 57-145 17-98 (98)
78 3c75_A Amicyanin; copper prote 98.8 1.7E-08 5.8E-13 86.2 8.7 78 52-145 54-132 (132)
79 1pcs_A Plastocyanin; electron 98.7 4.6E-09 1.6E-13 84.9 3.8 81 57-145 18-98 (98)
80 1bxv_A Plastocyanin; copper pr 98.7 2.6E-08 9E-13 79.1 7.0 74 57-145 18-91 (91)
81 1b3i_A PETE protein, protein ( 98.7 6.7E-08 2.3E-12 77.8 8.5 76 58-145 19-97 (97)
82 1kdj_A Plastocyanin; electron 98.6 7.4E-08 2.5E-12 78.3 8.0 82 57-145 16-102 (102)
83 1byp_A Protein (plastocyanin); 98.6 1.6E-07 5.6E-12 75.8 9.2 76 58-145 17-99 (99)
84 1mzy_A Copper-containing nitri 98.6 1.3E-07 4.4E-12 94.1 10.3 99 46-149 209-321 (333)
85 1plc_A Plastocyanin; electron 98.6 1.8E-07 6E-12 75.6 9.1 77 57-145 16-99 (99)
86 2bw4_A Copper-containing nitri 98.6 1.5E-07 5.2E-12 93.8 10.6 100 47-149 216-327 (340)
87 3erx_A Pseudoazurin; copper pr 98.6 1.2E-07 4.2E-12 79.5 8.3 75 58-147 21-95 (123)
88 3tu6_A Pseudoazurin (blue copp 98.6 1E-07 3.5E-12 80.4 6.9 77 57-148 22-98 (127)
89 3ef4_A Pseudoazurin, blue copp 98.5 4.6E-07 1.6E-11 75.9 9.6 75 58-147 22-96 (124)
90 1oe1_A Dissimilatory copper-co 98.4 5.1E-07 1.8E-11 89.8 9.8 100 46-149 209-321 (336)
91 1iuz_A Plastocyanin; electron 98.4 4.4E-07 1.5E-11 73.1 6.0 77 57-145 17-98 (98)
92 1cuo_A Protein (azurin ISO-2); 98.3 8.5E-07 2.9E-11 75.0 7.3 92 54-146 14-129 (129)
93 1paz_A Pseudoazurin precursor; 98.3 1.8E-06 6.3E-11 72.4 8.3 76 57-147 20-95 (123)
94 1id2_A Amicyanin; beta barrel, 98.3 5.1E-06 1.7E-10 67.8 9.9 77 53-145 29-106 (106)
95 1pmy_A Pseudoazurin; electron 98.2 2E-06 6.7E-11 72.2 7.2 76 57-147 20-95 (123)
96 3ay2_A Lipid modified azurin p 98.2 1.4E-06 4.7E-11 76.7 6.0 97 49-146 47-167 (167)
97 2ccw_A Azurin II, AZN-2; elect 98.1 1.2E-05 4E-10 67.9 9.3 92 54-146 14-129 (129)
98 2iaa_C Azurin; quinoprotein, t 98.1 1.4E-05 4.7E-10 67.4 9.2 92 54-146 13-128 (128)
99 1nwp_A Azurin; electron transp 98.1 1.4E-05 4.8E-10 67.3 8.9 91 54-145 14-128 (128)
100 3sbq_A Nitrous-oxide reductase 98.0 1.8E-05 6E-10 81.8 10.4 94 41-147 539-638 (638)
101 2ux6_A Pseudoazurin; type-1 co 98.0 1.2E-05 4.2E-10 67.2 7.4 73 58-147 21-93 (122)
102 3fsa_A Azurin; copper, cupredo 97.5 0.00042 1.4E-08 57.5 9.3 88 54-145 14-125 (125)
103 2aan_A Auracyanin A; cupredoxi 96.9 0.0016 5.5E-08 55.6 6.9 78 213-292 34-125 (139)
104 2cua_A Protein (CUA); CUA cent 96.9 0.004 1.4E-07 52.7 9.0 75 58-146 60-135 (135)
105 3cvb_A Plastocyanin; cupredoxi 96.9 0.00053 1.8E-08 55.3 3.0 73 213-291 18-90 (105)
106 3s8f_B Cytochrome C oxidase su 96.7 0.0067 2.3E-07 53.2 9.2 81 52-146 87-168 (168)
107 1iby_A Nitrosocyanin; RED copp 96.7 0.0052 1.8E-07 50.1 7.9 62 213-293 37-98 (112)
108 4hci_A Cupredoxin 1; structura 96.1 0.019 6.5E-07 45.7 7.8 61 213-292 27-87 (100)
109 2gim_A Plastocyanin; beta shee 95.4 0.0025 8.5E-08 51.4 -0.1 73 213-291 19-91 (106)
110 2ccw_A Azurin II, AZN-2; elect 95.4 0.014 4.8E-07 48.9 4.4 79 213-292 17-114 (129)
111 1nwp_A Azurin; electron transp 95.2 0.017 5.8E-07 48.3 4.5 79 213-292 17-114 (128)
112 1qhq_A Protein (auracyanin); e 95.1 0.033 1.1E-06 47.3 6.2 77 213-292 32-124 (140)
113 2cal_A Rusticyanin; iron respi 95.1 0.087 3E-06 45.5 8.9 84 191-292 52-139 (154)
114 2iaa_C Azurin; quinoprotein, t 94.6 0.037 1.3E-06 46.2 4.8 78 213-291 16-112 (128)
115 1cuo_A Protein (azurin ISO-2); 94.5 0.031 1E-06 46.8 4.2 79 213-292 17-114 (129)
116 2plt_A Plastocyanin; electron 94.0 0.068 2.3E-06 42.0 5.2 68 213-291 17-84 (98)
117 1pcs_A Plastocyanin; electron 93.7 0.058 2E-06 42.4 4.2 67 213-291 18-84 (98)
118 1bxv_A Plastocyanin; copper pr 93.5 0.15 5.3E-06 39.2 6.3 60 213-291 18-77 (91)
119 1fwx_A Nitrous oxide reductase 93.5 0.27 9.2E-06 51.8 9.8 61 213-291 512-574 (595)
120 3ay2_A Lipid modified azurin p 92.4 0.093 3.2E-06 45.8 3.8 79 213-292 57-152 (167)
121 3fsa_A Azurin; copper, cupredo 92.4 0.035 1.2E-06 45.9 1.0 78 213-291 17-113 (125)
122 1b3i_A PETE protein, protein ( 92.2 0.098 3.4E-06 41.0 3.5 66 213-291 18-83 (97)
123 2ov0_A Amicyanin; beta-sandwic 91.7 0.27 9.4E-06 39.2 5.6 63 213-292 32-94 (105)
124 1iuz_A Plastocyanin; electron 90.1 0.53 1.8E-05 36.8 5.8 69 213-292 17-85 (98)
125 1kdj_A Plastocyanin; electron 89.9 0.14 4.9E-06 40.4 2.4 65 213-291 16-88 (102)
126 1byp_A Protein (plastocyanin); 89.3 0.22 7.4E-06 39.1 2.9 68 213-291 16-85 (99)
127 1plc_A Plastocyanin; electron 88.2 0.32 1.1E-05 38.1 3.3 68 213-291 16-85 (99)
128 3c75_A Amicyanin; copper prote 84.4 1.1 3.8E-05 37.3 4.7 63 213-292 59-121 (132)
129 1id2_A Amicyanin; beta barrel, 83.5 1.4 4.6E-05 35.1 4.7 63 213-292 33-95 (106)
130 3sbq_A Nitrous-oxide reductase 81.7 4.7 0.00016 42.0 8.9 62 213-292 557-620 (638)
131 3isy_A Bsupi, intracellular pr 79.8 15 0.0005 29.9 9.6 72 220-293 16-102 (120)
132 2cua_A Protein (CUA); CUA cent 78.8 6.1 0.00021 32.8 7.4 59 214-292 60-118 (135)
133 1cyx_A CYOA; electron transpor 75.7 7.2 0.00025 34.9 7.2 74 58-145 41-115 (205)
134 3erx_A Pseudoazurin; copper pr 74.4 1.4 4.7E-05 36.2 2.1 61 213-292 20-80 (123)
135 3isy_A Bsupi, intracellular pr 73.0 36 0.0012 27.5 11.0 75 43-128 19-99 (120)
136 3s8f_B Cytochrome C oxidase su 71.5 11 0.00039 32.5 7.4 59 214-292 93-151 (168)
137 3hb3_B Cytochrome C oxidase su 64.3 22 0.00074 33.8 8.3 76 58-147 189-265 (298)
138 2gsm_B Cytochrome C oxidase su 63.6 22 0.00074 33.2 8.0 76 58-147 171-247 (262)
139 2ux6_A Pseudoazurin; type-1 co 62.4 6.3 0.00022 32.1 3.7 61 213-292 20-80 (122)
140 3tu6_A Pseudoazurin (blue copp 62.3 3.2 0.00011 34.2 1.8 61 213-292 22-82 (127)
141 2r39_A FIXG-related protein; s 58.2 19 0.00065 28.9 5.9 47 222-278 33-81 (118)
142 1pmy_A Pseudoazurin; electron 57.6 4.7 0.00016 33.0 2.1 61 213-292 20-80 (123)
143 2f1e_A Protein APAG; APAG prot 57.6 8.2 0.00028 31.7 3.5 49 69-117 34-88 (127)
144 1paz_A Pseudoazurin precursor; 57.4 5.8 0.0002 32.4 2.6 61 213-292 20-80 (123)
145 3ef4_A Pseudoazurin, blue copp 55.4 5.8 0.0002 32.5 2.2 61 213-292 21-81 (124)
146 1xvs_A Protein APAG; MCSG APC2 54.6 8.5 0.00029 31.6 3.1 49 69-117 33-87 (126)
147 1xq4_A Protein APAG; all beta 53.0 11 0.00038 31.4 3.6 49 69-117 38-92 (139)
148 1v54_B Cytochrome C oxidase po 52.4 41 0.0014 30.5 7.7 76 57-147 139-216 (227)
149 1yew_A Particulate methane mon 49.5 16 0.00056 35.3 4.6 19 101-119 318-336 (382)
150 1tza_A APAG protein, SOR45; st 48.1 9.9 0.00034 31.5 2.5 49 69-117 33-87 (134)
151 1xwv_A DER F II; beta sheets, 47.5 25 0.00085 28.7 5.0 62 57-118 24-93 (129)
152 1nep_A EPV20, BNPC2, epididyma 43.4 28 0.00097 28.4 4.7 61 58-118 26-95 (130)
153 2h7w_A Chagasin; beta-strands, 40.6 1.2E+02 0.0041 24.8 8.0 65 57-124 32-104 (131)
154 1cyx_A CYOA; electron transpor 39.0 88 0.003 27.8 7.4 60 214-293 41-100 (205)
155 3rfr_A PMOB; membrane, oxidore 39.0 48 0.0016 32.4 6.0 52 67-119 301-368 (419)
156 1x9u_A Umecyanin; cupredoxin, 34.8 36 0.0012 27.3 3.9 36 113-149 72-108 (116)
157 2p9r_A Alpha-2-M, alpha-2-macr 32.0 36 0.0012 26.2 3.4 70 218-292 13-84 (102)
158 2xzz_A Protein-glutamine gamma 29.1 59 0.002 25.3 4.1 52 67-123 23-78 (102)
159 2wgn_B Inhibitor of cysteine p 27.9 2.4E+02 0.0084 22.9 8.0 70 54-124 31-105 (132)
160 2hj1_A Hypothetical protein; s 26.5 23 0.00078 27.5 1.3 24 47-70 59-82 (97)
161 2wtp_A ORF131 protein, CZCE; m 25.9 26 0.0009 28.7 1.6 20 214-233 71-90 (131)
162 2c34_A ICP, inhibitor of cyste 25.8 2.5E+02 0.0084 22.2 8.4 66 57-123 14-88 (116)
163 4ac7_B Urease subunit beta; hy 24.3 69 0.0024 25.8 3.7 59 59-117 18-89 (126)
164 4ubp_B Protein (urease (chain 24.3 69 0.0024 25.8 3.7 59 59-117 18-89 (126)
165 1fft_B Ubiquinol oxidase; elec 22.9 54 0.0018 31.3 3.4 74 58-145 151-225 (315)
166 2cio_B Inhibitor of cysteine p 22.6 2.5E+02 0.0086 22.3 7.0 65 57-124 12-93 (121)
167 2wtp_A ORF131 protein, CZCE; m 21.9 31 0.0011 28.2 1.3 17 59-75 72-88 (131)
168 3rpf_C Molybdopterin convertin 20.8 37 0.0012 24.5 1.4 25 46-70 42-67 (74)
169 2gsm_B Cytochrome C oxidase su 20.7 2.2E+02 0.0076 26.2 7.1 59 214-292 171-229 (262)
170 1lm8_V VHL, VON hippel-lindau 20.4 1.3E+02 0.0043 25.6 4.8 43 63-113 14-56 (160)
171 2aqm_A Superoxide dismutase [C 20.3 59 0.002 27.5 2.7 25 436-460 29-53 (154)
No 1
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=2.5e-88 Score=718.24 Aligned_cols=437 Identities=24% Similarity=0.356 Sum_probs=347.3
Q ss_pred CCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCC-CCeeEEEccCCCCCCCCCCCCCC-C
Q 010700 24 ADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-T 101 (503)
Q Consensus 24 ~~~~~~~~l~i~~~~~~~dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DG~~~-~ 101 (503)
.+.+|+|+|+|++..+++||+++.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|.+++++||+++ +
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 456899999999999999999999999999999999999999999999999998 89999999999999999999998 9
Q ss_pred CCCCCCCCceEEEEEeCCCceeeEEccCchhhhhcCceeeEEEEeCCCCCCCCCCCCCce-EEEEeeeeeCCHHHHHHHh
Q 010700 102 NCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDI-TILIGDWYTRNHTALRKTL 180 (503)
Q Consensus 102 q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~-~l~l~d~~~~~~~~~~~~~ 180 (503)
||||+||++|+|+|++ +++||||||||.+.|+++||+|+|||+++.. . .+|+|. +|+|+||+++...++....
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~--~---~yD~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPAT--A---DYDEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCS--S---CCSEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCccc--C---CCCccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999999 5899999999999999999999999998764 2 348888 9999999999887765444
Q ss_pred hcCCCCCCCCeEEECCcCCCCCCCC---CCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccc
Q 010700 181 DAGKGLGMPDGVLINGKGPYQYNTT---LVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTV 257 (503)
Q Consensus 181 ~~~~~~~~~~~~liNG~~~~~~~~~---~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~ 257 (503)
..+ ..+.++++||||++.+.|... .+......+.+++++|++|||||||+|....+.|+|+||+|+||++||.+++
T Consensus 218 ~~~-~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~ 296 (580)
T 3sqr_A 218 RLG-APPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIV 296 (580)
T ss_dssp TTS-CCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEE
T ss_pred hcc-CCCCCceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCC
Confidence 332 245789999999999887542 1122345689999999999999999999999999999999999999999999
Q ss_pred eeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeeccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCcccccc
Q 010700 258 QQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMN 337 (503)
Q Consensus 258 p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~ 337 (503)
|..++++.|+|||||||+|++++++| +|||++.....+..........|||+|.++... .|.. .+.. ..+.+++
T Consensus 297 P~~~~~l~i~pGqRydVlv~a~~~~g-~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~--~P~~-~~~~--~~~~~~~ 370 (580)
T 3sqr_A 297 PYTTDTLLIGIGQRYDVIVEANAAAD-NYWIRGNWGTTCSTNNEAANATGILRYDSSSIA--NPTS-VGTT--PRGTCED 370 (580)
T ss_dssp EEEESSEEECTTCEEEEEEECCSCSS-EEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC--CCCC-CCCC--CCCCSCC
T ss_pred ceEeeEEEEccceEEEEEEEeCCCCC-eEEEEEecccccCccCCCCceEEEEEECCCCCC--CCCC-CCCC--ccchhhc
Confidence 99999999999999999999998888 999999886544221233568999999875421 1110 1111 0000111
Q ss_pred ccccccccCCCCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCC-CCCCchhccccccccCccccCC
Q 010700 338 QARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFV-NPSTPIRLADWFKVKGAYKLDF 416 (503)
Q Consensus 338 ~~~~~~~~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~-~~~~P~l~~~~~~~~~~~~~~~ 416 (503)
. ....|.+..+.+.| ...+.+.++.+. .++..+|+|||++|. +++.|+|++.+.+ .
T Consensus 371 ~---~~~~L~P~~~~~~~------~~~~~~~~l~~~------~~~~~~w~iN~~s~~~~~~~P~L~~~~~g---~----- 427 (580)
T 3sqr_A 371 E---PVASLVPHLALDVG------GYSLVDEQVSSA------FTNYFTWTINSSSLLLDWSSPTTLKIFNN---E----- 427 (580)
T ss_dssp S---CGGGCCBSSCCBCC------SEEEEEEEEEEE------ESSSEEEEETTBCCCCCTTSCHHHHHHTT---C-----
T ss_pred c---cccccccCCCCCCC------CccceEEEEEec------cCCceeEEECCEecccCCCCCchhhhhcC---C-----
Confidence 1 00123333322222 122334444432 235678999999996 5788988765321 1
Q ss_pred CCCCCCCCCCcceEEEecC----CCcEEEEEEeCCC--CCCCceeecCCceEEEeeccCCCCCCC-CCCCCCCCCCccce
Q 010700 417 PTKPVTGPPRMETSVINGT----YRGFMEVILQNND--TKMHAYHMSGYAFFVVGMDYGEWTDNS-RGTYNKWDGIARTT 489 (503)
Q Consensus 417 ~~~p~~~~~~~~~~~~~~~----~g~~vdivi~N~~--~~~HP~HLHGh~F~Vl~~g~g~~~~~~-~~~~n~~~p~~RDT 489 (503)
.+.|. ..+++.++ .|+||||+|+|.+ ...||||||||+||||++|.|.|++.. ...+|++||++|||
T Consensus 428 ~~~~~------~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDT 501 (580)
T 3sqr_A 428 TIFPT------EYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDV 501 (580)
T ss_dssp CCCCG------GGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESE
T ss_pred ccCCC------CcceeecccccCCCcEEEEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeE
Confidence 01111 23455555 5999999999988 789999999999999999999998653 36799999999999
Q ss_pred EEeCCCCcccCcc
Q 010700 490 TQARRHLCSNRNY 502 (503)
Q Consensus 490 v~v~~~g~~~~~~ 502 (503)
|.|+++||..|||
T Consensus 502 v~v~~~g~~~irf 514 (580)
T 3sqr_A 502 AALPGNGYLAIAF 514 (580)
T ss_dssp EEECTTSEEEEEE
T ss_pred EEeCCCceEEEEE
Confidence 9999999999998
No 2
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=2e-87 Score=716.75 Aligned_cols=458 Identities=29% Similarity=0.520 Sum_probs=357.2
Q ss_pred ceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCC-CCeeEEEccCCCCCCCCCCCCCC-CCC
Q 010700 26 LFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-TNC 103 (503)
Q Consensus 26 ~~~~~~l~i~~~~~~~dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DG~~~-~q~ 103 (503)
.+|+|+|+|++..+++||.++.+|+|||++|||+|||++||+|+|+|+|+|+ ++++|||||+++.+++++||+++ +||
T Consensus 2 ~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~ 81 (552)
T 1aoz_A 2 QIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQC 81 (552)
T ss_dssp CEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBC
T ss_pred eEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccC
Confidence 5899999999999999999999999999999999999999999999999998 99999999999999899999998 999
Q ss_pred CCCCCCceEEEEEeCCCceeeEEccCchhhhhcCceeeEEEEeCCCCCCCCCCCCCceEEEEeeeeeCCHHHHHHHhhcC
Q 010700 104 PIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAG 183 (503)
Q Consensus 104 ~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~ 183 (503)
+|+||++|+|+|++ +++||||||||.+.|+++||+|+|||+++.....++ .+|+|++|+|+||+++....+...+...
T Consensus 82 ~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~ 159 (552)
T 1aoz_A 82 AINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSK 159 (552)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTSS
T ss_pred CcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhcc
Confidence 99999999999999 799999999999999999999999999986544455 3478999999999998776654333321
Q ss_pred --CCCCCCCeEEECCcCCCCCCCCC-----------C-CCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEE
Q 010700 184 --KGLGMPDGVLINGKGPYQYNTTL-----------V-PDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLA 249 (503)
Q Consensus 184 --~~~~~~~~~liNG~~~~~~~~~~-----------~-~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~vi 249 (503)
...+.++.++|||+..++|.... . ...+..+.+++++|++|||||||+|..+.+.|+|+||+|+||
T Consensus 160 ~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi 239 (552)
T 1aoz_A 160 PIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV 239 (552)
T ss_dssp SCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEE
T ss_pred cccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEE
Confidence 12245789999999988774321 0 112234589999999999999999999999999999999999
Q ss_pred EecCCccceeeecEEEEcCCceEEEEEEe-CCCCCcceEEEEeeeccccccCCCcceEEEEEecCCCCC--CCCCCCCCC
Q 010700 250 ETEGSYTVQQNYTSLDIHVGQSYSFLVTM-DQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGK--ARGPLPEGP 326 (503)
Q Consensus 250 a~DG~~~~p~~~d~v~l~pGeR~dvlv~~-~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~--~~~~~p~~p 326 (503)
++||.+++|..++++.|+|||||||+|++ ++++| +|||++....... ......|||+|.+.... +..+.|..|
T Consensus 240 ~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g-~y~i~~~~~~~~~---~~~~~~ail~y~~~~~~~~p~~~~p~~p 315 (552)
T 1aoz_A 240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSE-NYWVSVGTRARHP---NTPPGLTLLNYLPNSVSKLPTSPPPQTP 315 (552)
T ss_dssp EETTEEEEEEEESCEEECTTCEEEEEEECCSCTTC-CEEEEEEEESSCC---CSCCEEEEEEETTSCTTSCCSSCCCCCC
T ss_pred EECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCC-CEEEEEEcccCCC---CCccEEEEEEECCCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999 45567 9999998764211 23567899999876521 111122222
Q ss_pred CCCCCccccccccccccccCCCCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhccccc
Q 010700 327 NDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWF 406 (503)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~~~~ 406 (503)
.. .+...... ..+. .+....+.+.| ..+++++.+..... ..++..+|+|||++|..++.|+|.+.+.
T Consensus 316 ~~-~~~~~~~~--~~l~-~l~~~~~~~~~--------~~~~~~~~l~~~~~-~~~~~~~w~iNg~s~~~p~~P~L~~~~~ 382 (552)
T 1aoz_A 316 AW-DDFDRSKN--FTYR-ITAAMGSPKPP--------VKFNRRIFLLNTQN-VINGYVKWAINDVSLALPPTPYLGAMKY 382 (552)
T ss_dssp CT-TCHHHHHH--HHTT-CCBCTTCCCCC--------SSCSEEEEEEEEEE-EETTEEEEEETTEEECCCSSCHHHHHHT
T ss_pred cc-cccccccc--cccc-ccccCCCCCCC--------CCCcEEEEEEEeec-cCCCeEEEEECCCccCCCCCCHHHHHhh
Confidence 11 01100000 0010 01100011111 23456666554211 2345678999999999899999988776
Q ss_pred cccCccccCCCCC-----------CCCCCCCcceEEEecCCCcEEEEEEeCCCC------CCCceeecCCceEEEeeccC
Q 010700 407 KVKGAYKLDFPTK-----------PVTGPPRMETSVINGTYRGFMEVILQNNDT------KMHAYHMSGYAFFVVGMDYG 469 (503)
Q Consensus 407 ~~~~~~~~~~~~~-----------p~~~~~~~~~~~~~~~~g~~vdivi~N~~~------~~HP~HLHGh~F~Vl~~g~g 469 (503)
++.+.|..+++.. +.+...+.++.++.++.|++|||+|+|.+. ..||||||||+||||++|.|
T Consensus 383 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G 462 (552)
T 1aoz_A 383 NLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDG 462 (552)
T ss_dssp TCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEES
T ss_pred cCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccC
Confidence 6666655433221 112234566778899999999999999873 46999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCccceEEeCCCCcccCcc
Q 010700 470 EWTDNSRGTYNKWDGIARTTTQARRHLCSNRNY 502 (503)
Q Consensus 470 ~~~~~~~~~~n~~~p~~RDTv~v~~~g~~~~~~ 502 (503)
.|++.....+|+.||+|||||.||++||++|||
T Consensus 463 ~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf 495 (552)
T 1aoz_A 463 KFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRF 495 (552)
T ss_dssp SCCGGGGGGSCCSSCCEESEEEECTTEEEEEEE
T ss_pred ccCcccccccccCCCCccCeEEeCCCceEEEEE
Confidence 998744457899999999999999999999998
No 3
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=4e-84 Score=678.59 Aligned_cols=428 Identities=24% Similarity=0.364 Sum_probs=329.9
Q ss_pred EEEEEEEEEEEeCCCCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCC-----CeeEEEccCCCCCCCCCCCCCC-C
Q 010700 28 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE-----SLLIHWSGIQQRRSSWQDGLLG-T 101 (503)
Q Consensus 28 ~~~~l~i~~~~~~~dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~-----~~siH~HG~~~~~~~~~DG~~~-~ 101 (503)
.+|+|+|++..+++||+++.+++|||++|||+||+++||+|+|+|+|+|++ +++|||||++|.+++++||+++ |
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 489999999999999999999999999999999999999999999999985 7999999999999999999998 9
Q ss_pred CCCCCCCCceEEEEEeCCCceeeEEccCchhhhhcCceeeEEEEeCCCC-CCCCCCCCCceEEEEeeeeeCCHHHHHHHh
Q 010700 102 NCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAII-PIPFDTPDGDITILIGDWYTRNHTALRKTL 180 (503)
Q Consensus 102 q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~ 180 (503)
||||+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+++||+++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 9999999999999999878999999999999999999999999987542 12343335678999999999866432
Q ss_pred hcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceee
Q 010700 181 DAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQN 260 (503)
Q Consensus 181 ~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~ 260 (503)
.+.....++++||||++++.|.. .....+.+++++|++|||||||+|..+.+.|+|+||+|+||++||.+++|..
T Consensus 161 -~~~~p~~~d~~liNG~g~~~~~~----~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~ 235 (495)
T 3t6v_A 161 -GAGGAITADSTLIDGLGRTHVNV----AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELT 235 (495)
T ss_dssp -CSSSCCCCSEEEETTBCCBSSSC----CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEE
T ss_pred -ccCCCCCCcEEEECCcCcCCCCc----ccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEE
Confidence 12222368999999998766521 1334689999999999999999999999999999999999999999999999
Q ss_pred ecEEEEcCCceEEEEEEeCCCCCcceEEEEeeeccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCccccccccc
Q 010700 261 YTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQAR 340 (503)
Q Consensus 261 ~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 340 (503)
++++.|+|||||||+|+++++.| +|||++.....+.. .......|||+|+++.... +....+.. ... .+.
T Consensus 236 ~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~~~~~-~~~~~~~ail~Y~~~~~~~--p~~~~~~~--~~~-~~~--- 305 (495)
T 3t6v_A 236 VDEIQIFAAQRYSFVLNANQPVG-NYWIRANPNSGGEG-FDGGINSAILRYDGATTAD--PVTVASTV--HTK-CLI--- 305 (495)
T ss_dssp ESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTSCSSC--CCCCCCSS--CSS-BCC---
T ss_pred eeeEEEcCceEEEEEEECCCCCc-eEEEEEecccCccc-cCCCceEEEEEECCCCCCC--CCCCCCCC--Ccc-ccc---
Confidence 99999999999999999998878 99999987543321 1123457999998764211 11101100 000 111
Q ss_pred cccccCCCCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhccccccccCccccCCCCCC
Q 010700 341 SIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKP 420 (503)
Q Consensus 341 ~~~~~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~~~~~~~~~~~~~~~~~p 420 (503)
+..|.+......|.... ...+++++.+... .++ .+|+|||++|..++.|+|++... +.+...
T Consensus 306 --~~~L~p~~~~~~p~~~~---~~~~d~~~~l~~~----~~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~~----- 367 (495)
T 3t6v_A 306 --ETDLHPLSRNGVPGNPH---QGGADCNLNLSLG----FAC-GNFVINGVSFTPPTVPVLLQICS---GANTAA----- 367 (495)
T ss_dssp --GGGCCBSSCCCCSSCSS---TTCSSEEEECCEE----EET-TEEEETTBCCCCCSSCHHHHHHT---TCCSST-----
T ss_pred --cccccccccccCCCccC---CCCCcEEEEEEEE----ecC-cEEEEcCEecCCCCCcchhhhhc---CCcCcc-----
Confidence 11233322222221100 1123444544331 112 37999999999999999877643 221110
Q ss_pred CCCCCCcceEEEecCCCcEEEEEEe-CCCCCCCceeecCCceEEEeeccCCCCCCCCCCCCCCCCCccceEEeCC-CCcc
Q 010700 421 VTGPPRMETSVINGTYRGFMEVILQ-NNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQARR-HLCS 498 (503)
Q Consensus 421 ~~~~~~~~~~~~~~~~g~~vdivi~-N~~~~~HP~HLHGh~F~Vl~~g~g~~~~~~~~~~n~~~p~~RDTv~v~~-~g~~ 498 (503)
.......++.++.|++|||+|+ |.....||||||||+|+||++++ ...+|++||+|||||.|++ +||.
T Consensus 368 ---~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~~g-------~~~~n~~~P~~rDtv~v~~~g~~~ 437 (495)
T 3t6v_A 368 ---DLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESAS-------NSTSNYDDPIWRDVVSIGGVGDNV 437 (495)
T ss_dssp ---TSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEECTT-------CCCCCSSSCCEESEEECCSTTCEE
T ss_pred ---cccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEecCC-------CCCcccCCCCCccEEEcCCCCcEE
Confidence 0111245788999999999998 66778999999999999998743 2358999999999999997 8899
Q ss_pred cCcc
Q 010700 499 NRNY 502 (503)
Q Consensus 499 ~~~~ 502 (503)
.|||
T Consensus 438 ~irf 441 (495)
T 3t6v_A 438 TIRF 441 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9998
No 4
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=6.7e-84 Score=676.82 Aligned_cols=425 Identities=26% Similarity=0.403 Sum_probs=329.5
Q ss_pred EEEEEEEEEEEeCCCCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCC-----CeeEEEccCCCCCCCCCCCCCC-C
Q 010700 28 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE-----SLLIHWSGIQQRRSSWQDGLLG-T 101 (503)
Q Consensus 28 ~~~~l~i~~~~~~~dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~-----~~siH~HG~~~~~~~~~DG~~~-~ 101 (503)
.+|+|+|++..+++||+++.+++|||++|||+||+++||+|+|+|+|+|++ +++|||||++|..++++||+++ +
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 489999999999999999999999999999999999999999999999985 7999999999999999999998 9
Q ss_pred CCCCCCCCceEEEEEeCCCceeeEEccCchhhhhcCceeeEEEEeCCCC-CCCCCCCCCceEEEEeeeeeCCHHHHHHHh
Q 010700 102 NCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAII-PIPFDTPDGDITILIGDWYTRNHTALRKTL 180 (503)
Q Consensus 102 q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~ 180 (503)
||||+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+++||+++....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~----- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL----- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-----
Confidence 9999999999999999878999999999999999999999999987542 1234333567899999999975532
Q ss_pred hcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceee
Q 010700 181 DAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQN 260 (503)
Q Consensus 181 ~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~ 260 (503)
.+.....++++||||++++.|. .....+.+++++|++|||||||+|..+.+.|+|+||+|+||++||.+++|..
T Consensus 159 -~~~~p~~~d~~liNG~~~~~~~-----~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~ 232 (499)
T 3pxl_A 159 -GPRFPGGADATLINGKGRAPSD-----SVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLE 232 (499)
T ss_dssp -SCSSCSSCSEEEETTBCCCTTC-----TTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEE
T ss_pred -ccCCCCCCcEEEECCCCcCCCC-----CCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceE
Confidence 1222236899999999887652 2245689999999999999999999999999999999999999999999999
Q ss_pred ecEEEEcCCceEEEEEEeCCCCCcceEEEEeeeccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCccccccccc
Q 010700 261 YTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQAR 340 (503)
Q Consensus 261 ~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 340 (503)
++++.|+|||||||+|++++++| +|||++.....+.. .......|||+|+++...... .+..+.. . .+.
T Consensus 233 ~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~~~~~-~~~~~~~ail~Y~~~~~~~p~-~~~~~~~----~-~~~--- 301 (499)
T 3pxl_A 233 VDSIQIFAAQRYSFVLDANQAVD-NYWIRANPNFGNVG-FDGGINSAILRYDGAPAVEPT-TNQTTSV----K-PLN--- 301 (499)
T ss_dssp ESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTSCSSCCC-CCCCCCS----S-BCC---
T ss_pred eeeEEECCCcEEEEEEECCCCCc-eEEEEEecccCccc-cCCCceEEEEEeCCCCCCCCC-CCCCCCC----c-ccc---
Confidence 99999999999999999998878 99999987543321 112345799999876421110 0000000 0 011
Q ss_pred cccccCCCCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhccccccccCccccCCCCCC
Q 010700 341 SIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKP 420 (503)
Q Consensus 341 ~~~~~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~~~~~~~~~~~~~~~~~p 420 (503)
+.+|.+....+.|.... ...+++++.+... .++ .+|+|||++|..|+.|+|++...+ .....
T Consensus 302 --~~~L~p~~~~~~p~~~~---~~~~d~~~~l~~~----~~~-~~w~iNg~s~~~~~~P~L~~~~~g---~~~~~----- 363 (499)
T 3pxl_A 302 --EVDLHPLVSTPVPGAPS---SGGVDKAINMAFN----FNG-SNFFINGASFVPPTVPVLLQILSG---AQTAQ----- 363 (499)
T ss_dssp --GGGCCBSSCCCCSSCSS---TTCSSEEEECCEE----ECS-SCEEETTBCCCCCSSCHHHHHHTT---CCSTT-----
T ss_pred --cccccccccccCCCccc---CCCCcEEEEEEEE----ecC-cEEEEcCEecCCCCCchhhhhhcC---Ccccc-----
Confidence 11233332222221110 1124455554431 122 379999999999999998776432 21110
Q ss_pred CCCCCCcceEEEecCCCcEEEEEEe---CCCCCCCceeecCCceEEEeeccCCCCCCCCCCCCCCCCCccceEEeCC---
Q 010700 421 VTGPPRMETSVINGTYRGFMEVILQ---NNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQARR--- 494 (503)
Q Consensus 421 ~~~~~~~~~~~~~~~~g~~vdivi~---N~~~~~HP~HLHGh~F~Vl~~g~g~~~~~~~~~~n~~~p~~RDTv~v~~--- 494 (503)
.......++.++.|++|||+|+ |.....||||||||+||||++++ ...+|++||+|||||.||+
T Consensus 364 ---~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g-------~~~~n~~~P~~rDtv~v~~~~p 433 (499)
T 3pxl_A 364 ---DLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG-------STVYNYDNPIFRDVVSTGTPAA 433 (499)
T ss_dssp ---TSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT-------CCCCCSSSCCEESEEECCCGGG
T ss_pred ---ccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC-------CcccccCCCCccceEEcCCcCC
Confidence 0111245788999999999999 56678999999999999998642 2358999999999999997
Q ss_pred CCcccCcc
Q 010700 495 HLCSNRNY 502 (503)
Q Consensus 495 ~g~~~~~~ 502 (503)
+||..|||
T Consensus 434 g~~~~irf 441 (499)
T 3pxl_A 434 GDNVTIRF 441 (499)
T ss_dssp TCEEEEEE
T ss_pred CcEEEEEE
Confidence 89999998
No 5
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-83 Score=680.49 Aligned_cols=431 Identities=22% Similarity=0.320 Sum_probs=336.8
Q ss_pred ceEEEEEEEEEEEeCCCC-ceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCC-CCeeEEEccCCCCCCCCCCCCCC-CC
Q 010700 26 LFVYFDFEVSYITASPLG-VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-TN 102 (503)
Q Consensus 26 ~~~~~~l~i~~~~~~~dG-~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DG~~~-~q 102 (503)
++|+|+|+|++..+++|| .++.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||+++.+++++||+++ +|
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 7999999999999999999999999999999999 99999999999998899999998 99
Q ss_pred CCCCCCCceEEEEEeCCCceeeEEccCchhhhhcCceeeEEEEeCCCCCCCCCCCCCceEEEEeeeeeCCHHHHHHHhh-
Q 010700 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLD- 181 (503)
Q Consensus 103 ~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~- 181 (503)
|||+||++|+|+|++++++||||||||.+.|+++||+|+|||+++.. |+ .+|+|++|+|+||+++...++...+.
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999976899999999999999999999999999753 33 55899999999999998877654322
Q ss_pred ---cCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccce
Q 010700 182 ---AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ 258 (503)
Q Consensus 182 ---~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p 258 (503)
.....+.++.+||||+.. +.+++++||+|||||||+|..+.+.|+|+||+|+||++||.+++|
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~--------------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P 222 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN--------------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEK 222 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS--------------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred cccCCCCCCCCceEEECCCCc--------------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccc
Confidence 122345689999999986 899999999999999999999999999999999999999999999
Q ss_pred eeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeecccc---ccCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCcccc
Q 010700 259 QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNE---SQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFS 335 (503)
Q Consensus 259 ~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~---~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~ 335 (503)
..++++.|+|||||||+|++++.++++|||++.....+. +........++|+|.++...+ .+.. .. .....
T Consensus 223 ~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p---~~~~-~~--~~~~~ 296 (534)
T 1zpu_A 223 NVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALP---TQNY-VD--SIDNF 296 (534)
T ss_dssp EEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBC---CCCC-CS--CSSCS
T ss_pred cEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCC---CCCc-cc--ccccc
Confidence 999999999999999999998654339999997654311 112235678999998764211 1100 00 00000
Q ss_pred ccccccccccCCCCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhccccccccCccccC
Q 010700 336 MNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLD 415 (503)
Q Consensus 336 ~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~~~~~~~~~~~~~ 415 (503)
+++ ..+.+....+.+ ..+++++.+...+....++...|+|||++|..++.|+|++.... +.+..+
T Consensus 297 ~~~-----~~l~p~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~~~ 361 (534)
T 1zpu_A 297 LDD-----FYLQPYEKEAIY--------GEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSS--GDQANN 361 (534)
T ss_dssp CCG-----GGCCBSSCCCCC--------CSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTS--GGGTTC
T ss_pred ccc-----ccceeCCCCCCC--------CCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeeccc--CcccCC
Confidence 111 012221111111 12345555543221113456689999999999999998766431 111111
Q ss_pred CCCCCCCCCCCcceEEEecCCCcEEEEEEeCCCCCCCceeecCCceEEEeeccC----------CCCCCCCCCCCCCCCC
Q 010700 416 FPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYG----------EWTDNSRGTYNKWDGI 485 (503)
Q Consensus 416 ~~~~p~~~~~~~~~~~~~~~~g~~vdivi~N~~~~~HP~HLHGh~F~Vl~~g~g----------~~~~~~~~~~n~~~p~ 485 (503)
+.. ...+.+++.++.|++|||+|+|.+.+.||||||||+||||+++.+ .|++..... +..+|+
T Consensus 362 ----~~~--~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~-~~~~p~ 434 (534)
T 1zpu_A 362 ----SEI--YGSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPA-FPEYPM 434 (534)
T ss_dssp ----GGG--GCSSSCEEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCC-CCSSCE
T ss_pred ----Ccc--cCCCceEEEeCCCCEEEEEEeCCCCCCCCeEecCCceEEEeecCCccccccCcccccCcccccc-ccCCCC
Confidence 110 112356788999999999999999899999999999999999865 455432222 357899
Q ss_pred ccceEEeCCCCcccCcc
Q 010700 486 ARTTTQARRHLCSNRNY 502 (503)
Q Consensus 486 ~RDTv~v~~~g~~~~~~ 502 (503)
|||||.|+++||++|||
T Consensus 435 ~RDTv~V~pgg~v~IrF 451 (534)
T 1zpu_A 435 RRDTLYVRPQSNFVIRF 451 (534)
T ss_dssp EESEEEECTTCEEEEEE
T ss_pred eeeEEEeCCCCEEEEEE
Confidence 99999999999999998
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=5e-83 Score=677.33 Aligned_cols=434 Identities=23% Similarity=0.344 Sum_probs=331.4
Q ss_pred hcCCceEEEEEEEEEEEeCCCCc-eeEEEEEcCCCCCceEEEecCCEEEEEEEeCCC-----CCeeEEEccCCCCCCCCC
Q 010700 22 SAADLFVYFDFEVSYITASPLGV-PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-----ESLLIHWSGIQQRRSSWQ 95 (503)
Q Consensus 22 ~~~~~~~~~~l~i~~~~~~~dG~-~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~-----~~~siH~HG~~~~~~~~~ 95 (503)
+.++...+|+|+|++..+++||+ ++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++
T Consensus 18 ~~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~ 97 (521)
T 1v10_A 18 LSLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEM 97 (521)
T ss_dssp ----CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGG
T ss_pred hhcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCcc
Confidence 33455678999999999999999 999999999999999999999999999999999 999999999999888999
Q ss_pred CCCCC-CCCCCCCCCceEEEEEeCCCceeeEEccCchhhhhcCceeeEEEEeCCCC-CCCCCCCCCceEEEEeeeeeCCH
Q 010700 96 DGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAII-PIPFDTPDGDITILIGDWYTRNH 173 (503)
Q Consensus 96 DG~~~-~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~ 173 (503)
||+++ +||+|+||++|+|+|++++++||||||||.+.|+++||+|+|||+++.+. +.+|+..++|++|+|+||+++..
T Consensus 98 DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~ 177 (521)
T 1v10_A 98 DGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLS 177 (521)
T ss_dssp SCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCC
T ss_pred CCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCH
Confidence 99998 99999999999999997678999999999999999999999999987532 22343334799999999999876
Q ss_pred HHHHHHhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecC
Q 010700 174 TALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEG 253 (503)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG 253 (503)
.++.. ..+...+.++.++|||+.++.|.. .....+.+++++|++|||||||+|..+.+.|+|+||+|+||+.||
T Consensus 178 ~~~~~--~~~~~~~~~d~~liNG~~~~~~~~----~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG 251 (521)
T 1v10_A 178 TVLFP--NPNKAPPAPDTTLINGLGRNSANP----SAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDG 251 (521)
T ss_dssp C---------CCCSCCSEEEETTBCCCSSCG----GGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETT
T ss_pred HHHhh--ccCCCCCCCCEEEECCcccCCCCC----CCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCC
Confidence 65532 122334568999999999876631 123458999999999999999999999999999999999999999
Q ss_pred CccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeeccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCcc
Q 010700 254 SYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKT 333 (503)
Q Consensus 254 ~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~ 333 (503)
.+++|..++++.|+|||||||+|++++++| +|||++.....+.. .......++|+|.+..... +.+... . .
T Consensus 252 ~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g-~y~i~~~~~~~~~~-~~~~~~~ail~y~~~~~~~--p~~~~~-~--~-- 322 (521)
T 1v10_A 252 VSHQPLTVDSLTIFAGQRYSVVVEANQAVG-NYWIRANPSNGRNG-FTGGINSAIFRYQGAAVAE--PTTSQN-S--G-- 322 (521)
T ss_dssp EEEEEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTCCSCC--CCCCCC-C--S--
T ss_pred ccccceeeeeEEEcccceEEEEEEcCCCCC-ceeeeecccccccc-CCCCceeEEEEECCCCCCC--CCCCCC-c--c--
Confidence 999999999999999999999999998777 99999976643221 1112346999998765221 111000 0 0
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCe-EEEEecCccCCCCCCchhccccccccCcc
Q 010700 334 FSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGK-RRATLSGISFVNPSTPIRLADWFKVKGAY 412 (503)
Q Consensus 334 ~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~-~~~~iN~~s~~~~~~P~l~~~~~~~~~~~ 412 (503)
..++. .++.+....+.|..+. ....+.++.+... .++. .+|+|||++|..+..|+|++... +.+
T Consensus 323 ~~~~~-----~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~----~~~~~~~~~iNg~~~~~~~~P~l~~~~~---g~~ 387 (521)
T 1v10_A 323 TALNE-----ANLIPLINPGAPGNPV---PGGADINLNLRIG----RNATTADFTINGAPFIPPTVPVLLQILS---GVT 387 (521)
T ss_dssp CBCCG-----GGCCBSSCCCCSSCSS---TTCSSEEEECCEE----CCSSSSCCEESSCCCCCCSSCHHHHHHH---TCC
T ss_pred cccch-----hhcccCCcccCCCccc---CCcceEEEEEEEe----cCCceeEEEECCCcccCCCCchhhhhhc---CCc
Confidence 01111 1222222222222111 0123444544321 1222 47999999999888898876542 211
Q ss_pred ccCCCCCCCCCCCCcceEEEecCCCcEEEEEEeCCCCCCCceeecCCceEEEeeccCCCCCCCCCCCCCCCCCccceEEe
Q 010700 413 KLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQA 492 (503)
Q Consensus 413 ~~~~~~~p~~~~~~~~~~~~~~~~g~~vdivi~N~~~~~HP~HLHGh~F~Vl~~g~g~~~~~~~~~~n~~~p~~RDTv~v 492 (503)
... ..+.+.+++.++.|++|||+++| .+.||||||||+||||+++++. .+|+.||+|||||.|
T Consensus 388 ~~~--------~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V 450 (521)
T 1v10_A 388 NPN--------DLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSI 450 (521)
T ss_dssp CGG--------GSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEEC
T ss_pred ccc--------cCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEecCCCC-------ccccCCCCeeeeEEe
Confidence 100 11224577889999999999999 7899999999999999997662 468899999999999
Q ss_pred -CCCCcccCcc
Q 010700 493 -RRHLCSNRNY 502 (503)
Q Consensus 493 -~~~g~~~~~~ 502 (503)
|++||++|||
T Consensus 451 ~p~gg~v~Irf 461 (521)
T 1v10_A 451 GGGGDNVTFRF 461 (521)
T ss_dssp CBSSCEEEEEE
T ss_pred CCCCcEEEEEE
Confidence 8999999998
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=3.7e-80 Score=660.06 Aligned_cols=438 Identities=23% Similarity=0.321 Sum_probs=335.7
Q ss_pred cCCceEEEEEEEEEEE--eCCCCce-eEEEEEcCCCCCceEEEecCCEEEEEEEeCC-CCCeeEEEccCCCCCCCCCCCC
Q 010700 23 AADLFVYFDFEVSYIT--ASPLGVP-QQVIAINGKFPGPTINVTTNNNVVVNVRNKL-DESLLIHWSGIQQRRSSWQDGL 98 (503)
Q Consensus 23 ~~~~~~~~~l~i~~~~--~~~dG~~-~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l-~~~~siH~HG~~~~~~~~~DG~ 98 (503)
..+.+++|+|++++.. +.+||+. +.+|+|||++|||+|||++||+|+|+|+|+| +++++|||||+++.+++++||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 4566899999999999 9999999 9999999999999999999999999999999 6899999999999888999999
Q ss_pred CC-CCCCCCC-CCceEEEEEeCCCceeeEEccCchhhhhcCceeeEEEEeCCCCCCCCCCCCCce-EEEEeeeeeCCHHH
Q 010700 99 LG-TNCPIPP-KWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDI-TILIGDWYTRNHTA 175 (503)
Q Consensus 99 ~~-~q~~i~P-G~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~-~l~l~d~~~~~~~~ 175 (503)
++ +||+|+| |++|+|+|++ +++||||||||.+.|+++||+|+|||++++. . .+|+|. +|+|+||+++...+
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~--~---~~d~d~~~l~l~Dw~~~~~~~ 182 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS--L---PYDIDLGVFPITDYYYRAADD 182 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS--S---CCSEEEEEEEEEEECSSCHHH
T ss_pred CccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCc--C---CCcccceEEEEeccccCCHHH
Confidence 98 9999999 9999999999 5899999999999999999999999998764 2 348887 99999999998876
Q ss_pred HHHHhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCc
Q 010700 176 LRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSY 255 (503)
Q Consensus 176 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~ 255 (503)
+..... ....+.++.++|||+..+.|. .+...+.+++++|++|||||||+|..+.+.|+|+||+|+||+.||.+
T Consensus 183 ~~~~~~-~~~~~~~d~~liNG~~~~~~~-----~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~ 256 (559)
T 2q9o_A 183 LVHFTQ-NNAPPFSDNVLINGTAVNPNT-----GEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVP 256 (559)
T ss_dssp HHHHHT-TSCCCCBSEEEETTBCBCTTT-----CCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEE
T ss_pred Hhhhhh-cCCCCccceeEECCccccCcC-----CCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcc
Confidence 643322 223456899999999986552 22346899999999999999999999999999999999999999999
Q ss_pred cceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEee--eccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCcc
Q 010700 256 TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA--RFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKT 333 (503)
Q Consensus 256 ~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~--~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~ 333 (503)
++|..++++.|+|||||||+|++++++| +|||++.. ...+.. .......++|+|.++... .|....... .+.
T Consensus 257 ~~p~~~~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~~-~~~~~~~ail~y~~~~~~--~P~~~~~~~-~~~- 330 (559)
T 2q9o_A 257 VNAMTVDSLFLAVGQRYDVVIDASRAPD-NYWFNVTFGGQAACGG-SLNPHPAAIFHYAGAPGG--LPTDEGTPP-VDH- 330 (559)
T ss_dssp EEEEEESCEEECTTCEEEEEEECCSCSS-EEEEEEECCGGGTTCC-BSSSCCEEEEEETTSCCS--CCCCCCCCC-CCC-
T ss_pred cCceEeCeEEEccEEEEEEEEECCCCCC-cEEEEEEeccccccCC-CCCCceeEEEEECCCCCC--CCCCCCCcC-CCc-
Confidence 9999999999999999999999998777 99999987 322211 122456899999876421 111100000 000
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCC-CCCchhccccccccCcc
Q 010700 334 FSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVN-PSTPIRLADWFKVKGAY 412 (503)
Q Consensus 334 ~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~-~~~P~l~~~~~~~~~~~ 412 (503)
.+++. ..+.+..+.+.|..... ...+.++.+.... ...+...|+|||++|.. +..|+|.+...+..
T Consensus 331 ~~~~~-----~~l~p~~~~~~p~~~~~---~~~~~~~~~~~~~--~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~--- 397 (559)
T 2q9o_A 331 QCLDT-----LDVRPVVPRSVPVNSFV---KRPDNTLPVALDL--TGTPLFVWKVNGSDINVDWGKPIIDYILTGNT--- 397 (559)
T ss_dssp TTCCC-----SCCCBSSCCBCCCTTCC---CCGGGEEEEEEEC--SSSSSCEEEETTBCCCCCTTSCHHHHHHHTCC---
T ss_pred ccccc-----cccccCCCCCCCCcccc---cceeEEEEEEeec--CCCceEEEEECCEecccCCCCCcHhHhhcCCc---
Confidence 01111 11222222222221111 1112233332211 12245789999999964 57888765432110
Q ss_pred ccCCCCCCCCCCCCcceEEEecCC-CcEEEEEEeCCC----CCCCceeecCCceEEEeecc---------CCCCCC-CCC
Q 010700 413 KLDFPTKPVTGPPRMETSVINGTY-RGFMEVILQNND----TKMHAYHMSGYAFFVVGMDY---------GEWTDN-SRG 477 (503)
Q Consensus 413 ~~~~~~~p~~~~~~~~~~~~~~~~-g~~vdivi~N~~----~~~HP~HLHGh~F~Vl~~g~---------g~~~~~-~~~ 477 (503)
..| .+.+++.++. ++|++|+|+|.+ .+.||||||||+||||+++. |.|++. ...
T Consensus 398 -----~~~------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~ 466 (559)
T 2q9o_A 398 -----SYP------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLA 466 (559)
T ss_dssp -----CCC------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGG
T ss_pred -----cCC------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCcccccc
Confidence 011 1456677765 678888999976 68999999999999999987 777642 124
Q ss_pred CCCCCCCCccceEEeCCCCcccCcc
Q 010700 478 TYNKWDGIARTTTQARRHLCSNRNY 502 (503)
Q Consensus 478 ~~n~~~p~~RDTv~v~~~g~~~~~~ 502 (503)
.+|+.||+|||||.||++||++|||
T Consensus 467 ~~n~~~p~~RDTV~Vp~~g~v~IrF 491 (559)
T 2q9o_A 467 RLNGDNPPRRDTTMLPAGGWLLLAF 491 (559)
T ss_dssp GCCCBSCCEESEEEECTTSEEEEEE
T ss_pred ccccCCCCccceEEccCCccEEEEE
Confidence 6899999999999999999999998
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=2.1e-80 Score=655.08 Aligned_cols=423 Identities=26% Similarity=0.412 Sum_probs=327.4
Q ss_pred EEEEEEEEEEeCCCCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCC-----CCeeEEEccCCCCCCCCCCCCCC-CC
Q 010700 29 YFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-----ESLLIHWSGIQQRRSSWQDGLLG-TN 102 (503)
Q Consensus 29 ~~~l~i~~~~~~~dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~-----~~~siH~HG~~~~~~~~~DG~~~-~q 102 (503)
.|+|+|++..+++||+++.+|+|||++ ||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+++ +|
T Consensus 6 ~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq 84 (503)
T 1hfu_A 6 VDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (503)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccccc
Confidence 799999999999999999999999999 999999999999999999999 99999999999988899999998 99
Q ss_pred CCCCCCCceEEEEEeCCCceeeEEccCchhhhhcCceeeEEEEeCCCC-CCCCCCCCCceEEEEeeeeeCCHHHHHHHhh
Q 010700 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAII-PIPFDTPDGDITILIGDWYTRNHTALRKTLD 181 (503)
Q Consensus 103 ~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~ 181 (503)
|+|+||++|+|+|++++++||||||||.+.|+++||+|+|||+++.+. +.+|+..++|++|+|+||+++...++..
T Consensus 85 ~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~--- 161 (503)
T 1hfu_A 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQG--- 161 (503)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC----
T ss_pred CCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhcC---
Confidence 999999999999997678999999999999999999999999987532 2234333479999999999987654321
Q ss_pred cCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeee
Q 010700 182 AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNY 261 (503)
Q Consensus 182 ~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~ 261 (503)
.+.++.++|||+..+.|.. ....+.+++++|++|||||||+|..+.+.|+|+||.|+||+.||.+++|..+
T Consensus 162 ----~~~~d~~liNG~~~~~~~~-----~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~ 232 (503)
T 1hfu_A 162 ----AAQPDATLINGKGRYVGGP-----AAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTV 232 (503)
T ss_dssp ------CCSEEEETTBCCBTTCC-----CCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred ----CCCCCEEEECcccccCCCC-----CCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCcccccccc
Confidence 1457999999999876632 2445899999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCceEEEEEEeCCCCCcceEEEEeeeccccc---cCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCccccccc
Q 010700 262 TSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES---QWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQ 338 (503)
Q Consensus 262 d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~---~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~ 338 (503)
+++.|+|||||||+|++++++| +|||++........ ........++|+|.++...... .+..|.. ..++.
T Consensus 233 ~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~-~~~~~~~-----~~l~~ 305 (503)
T 1hfu_A 233 DRLQIFTGQRYSFVLDANQPVD-NYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPT-TSANPNP-----AQLNE 305 (503)
T ss_dssp SBEEECTTCEEEEEEECCSCSS-EEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCC-CCCCSSC-----CBCCG
T ss_pred CeEEEcccceEEEEEEcCCCcc-ceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCC-CCCCCcc-----CCCcc
Confidence 9999999999999999998777 89999976533211 0111234699999876421100 0001110 01111
Q ss_pred cccccccCCCCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhccccccccCccccCCCC
Q 010700 339 ARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPT 418 (503)
Q Consensus 339 ~~~~~~~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~~~~~~~~~~~~~~~~ 418 (503)
..|.+....+.|..+. ....+.++.+.. ..++. +|+|||++|..+..|+|++... +.+...
T Consensus 306 -----~~l~p~~~~~~p~~~~---~~~~~~~~~l~~----~~~~~-~~~iNg~~~~~~~~P~l~~~~~---g~~~~~--- 366 (503)
T 1hfu_A 306 -----ADLHALIDPAAPGIPT---PGAADVNLRFQL----GFSGG-RFTINGTAYESPSVPTLLQIMS---GAQSAN--- 366 (503)
T ss_dssp -----GGCBBSSSCSCSSCSS---TTCSSEEEECCE----EEETT-EEEETTBCCCCCSSCHHHHHHT---TCCSGG---
T ss_pred -----ccccccCccCCCCccc---CCcceEEEEEEe----eccCc-eEEECCCccCCCCCcchhhhhc---CCcccc---
Confidence 1222222222221111 012334444332 11222 7999999999888898876542 211100
Q ss_pred CCCCCCCCcceEEEecCCCcEEEEEEeC-CCCCCCceeecCCceEEEeeccCCCCCCCCCCCCCCCCCccceEEe-CCCC
Q 010700 419 KPVTGPPRMETSVINGTYRGFMEVILQN-NDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQA-RRHL 496 (503)
Q Consensus 419 ~p~~~~~~~~~~~~~~~~g~~vdivi~N-~~~~~HP~HLHGh~F~Vl~~g~g~~~~~~~~~~n~~~p~~RDTv~v-~~~g 496 (503)
..+.+..++.++.|++|||+++| ...+.||||||||+||||+++++. .+|+.||+|||||.| |++|
T Consensus 367 -----~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~ 434 (503)
T 1hfu_A 367 -----DLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGD 434 (503)
T ss_dssp -----GSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTC
T ss_pred -----cCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCCc
Confidence 11224678889999999999995 457899999999999999997662 468899999999999 9999
Q ss_pred cccCcc
Q 010700 497 CSNRNY 502 (503)
Q Consensus 497 ~~~~~~ 502 (503)
|++|||
T Consensus 435 ~v~irf 440 (503)
T 1hfu_A 435 EVTIRF 440 (503)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 999998
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=1.3e-72 Score=586.64 Aligned_cols=378 Identities=20% Similarity=0.294 Sum_probs=297.2
Q ss_pred cCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCC
Q 010700 23 AADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102 (503)
Q Consensus 23 ~~~~~~~~~l~i~~~~~~~dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q 102 (503)
+.+++++|+|++++..+++||+++.+|+|||++|||+|+|++||+|+|+|+|+|+++++|||||+++. +++||++
T Consensus 12 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~--- 86 (439)
T 2xu9_A 12 SQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPIS--PKVDDPF--- 86 (439)
T ss_dssp CBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCC--TTTSCTT---
T ss_pred cCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCC--ccccCCc---
Confidence 35578999999999999999999999999999999999999999999999999999999999999875 4899987
Q ss_pred CCCCCCCceEEEEEeC-CCceeeEEccCc----hhhhhcCceeeEEEEeCCCCCCCCCCCCCceEEEEeeeeeCCHHHHH
Q 010700 103 CPIPPKWNWTYQFQVK-DQVGSFFYFPSL----HFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALR 177 (503)
Q Consensus 103 ~~i~PG~~~~y~f~~~-~~~Gt~wyH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~ 177 (503)
+.|+||++|+|+|+++ +++||||||||. +.|+++||+|+|||+++.+. .+...+++|++|+++||+++......
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~-~~~~~~~~e~~l~l~D~~~~~~~~~~ 165 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDA-IPELREAEEHLLVLKDLALQGGRPAP 165 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGG-SHHHHTSEEEEEEEEEECEETTEECC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCcccc-CccCCCCCcEEEEEEeeeeCCCCcCC
Confidence 5699999999999986 479999999996 57999999999999987532 11113588999999999997531000
Q ss_pred H-HhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCcc
Q 010700 178 K-TLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT 256 (503)
Q Consensus 178 ~-~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~ 256 (503)
. .+.. .....++.++|||+.. |.+++++| +|||||||+|..+.+.|+|+||+|+||+.||.++
T Consensus 166 ~~~~~~-~~g~~~~~~~iNG~~~--------------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~ 229 (439)
T 2xu9_A 166 HTPMDW-MNGKEGDLVLVNGALR--------------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFL 229 (439)
T ss_dssp CCHHHH-HHCCCCSEEEETTEES--------------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred CCcccc-ccCCCCCEEEECCccC--------------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCC
Confidence 0 0000 0012468999999987 89999999 9999999999999999999999999999999997
Q ss_pred -ceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeeccccc--------------cCCCcceEEEEEecCCCCCCCCC
Q 010700 257 -VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES--------------QWKRVTGVAILHYTNSKGKARGP 321 (503)
Q Consensus 257 -~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~--------------~~~~~~~~~il~y~~~~~~~~~~ 321 (503)
+|..++++.|+|||||||+|++++ +| +|||++.....+.. ........++++|.+.... .+
T Consensus 230 ~~p~~~~~l~l~pgeR~dv~v~~~~-~G-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~ 305 (439)
T 2xu9_A 230 EEPLEVSELLLAPGERAEVLVRLRK-EG-RFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP--LP 305 (439)
T ss_dssp EEEEEESCEEECTTCEEEEEEECCS-SE-EEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC--CC
T ss_pred CCceEeceEEECCceeEEEEEEcCC-Cc-eEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc--cc
Confidence 799999999999999999999997 67 89999875432110 0012356788999865421 11
Q ss_pred CCCCCCCCCCccccccccccccccCCCCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchh
Q 010700 322 LPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIR 401 (503)
Q Consensus 322 ~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l 401 (503)
+|.. + .+....+.+ ..++++.|...+ . ...|+|||++|..+..+
T Consensus 306 ~p~~----------l----------~~~~~l~~~---------~~~r~~~l~~~~----~-g~~~~iNg~~~~~~~~~-- 349 (439)
T 2xu9_A 306 LPKA----------L----------SPFPTLPAP---------VVTRRLVLTEDM----M-AARFFINGQVFDHRRVD-- 349 (439)
T ss_dssp CCSC----------C----------CCCCCCCCC---------SEEEEEEEEEEG----G-GTEEEETTBCCCTTCCC--
T ss_pred Cccc----------C----------CCcccCCCC---------CcceEEEEEeec----c-CceEeECCEECCCCCCc--
Confidence 1110 0 000000111 123566665421 1 13799999999643211
Q ss_pred ccccccccCccccCCCCCCCCCCCCcceEEEecCCCcEEEEEEeCCCCCCCceeecCCceEEEeeccCCCCCCCCCCCCC
Q 010700 402 LADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNK 481 (503)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~vdivi~N~~~~~HP~HLHGh~F~Vl~~g~g~~~~~~~~~~n~ 481 (503)
+.++.|++++|+|+|.+.+.||||||||+||||+++++.+
T Consensus 350 ------------------------------~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~~---------- 389 (439)
T 2xu9_A 350 ------------------------------LKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLSVGGRPF---------- 389 (439)
T ss_dssp ------------------------------EEECTTCEEEEEEEECSSSCEEEEESSCCBEEEEETTEEC----------
T ss_pred ------------------------------eecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEeeCCCCC----------
Confidence 2467899999999999999999999999999999976643
Q ss_pred CCCCccceEEeCCCCcccCcc
Q 010700 482 WDGIARTTTQARRHLCSNRNY 502 (503)
Q Consensus 482 ~~p~~RDTv~v~~~g~~~~~~ 502 (503)
.+|.|||||.|+++||++|||
T Consensus 390 ~~p~~rDTv~v~p~~~v~i~f 410 (439)
T 2xu9_A 390 PYRAWKDVVNLKAGEVARLLV 410 (439)
T ss_dssp SSCCCBSEEEECTTCEEEEEE
T ss_pred CCCCCeEEEEeCCCCEEEEEE
Confidence 379999999999999999998
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=1.6e-72 Score=586.68 Aligned_cols=375 Identities=16% Similarity=0.177 Sum_probs=289.9
Q ss_pred ceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCC
Q 010700 26 LFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCP 104 (503)
Q Consensus 26 ~~~~~~l~i~~~~~~~-dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~ 104 (503)
..++|+|++++..+++ ||+++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++..+ +||++ ||+
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~--~~~ 92 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP--ARM 92 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG--GGC
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC--cCc
Confidence 3578999999999988 799999999999999999999999999999999999999999999988754 99998 899
Q ss_pred CCCCCceEEEEEeCCCceeeEEccCc----hhhhhcCceeeEEEEeCCCCCCCCC--CCCCceEEEEeeeeeCCHHHHHH
Q 010700 105 IPPKWNWTYQFQVKDQVGSFFYFPSL----HFQRASGGFGGFIINNRAIIPIPFD--TPDGDITILIGDWYTRNHTALRK 178 (503)
Q Consensus 105 i~PG~~~~y~f~~~~~~Gt~wyH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~--~~d~e~~l~l~d~~~~~~~~~~~ 178 (503)
|+||++|+|+|++.+++||||||||. +.|+++||+|+|||+++.....+++ ..++|++|+|+||+++.+.++..
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~ 172 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY 172 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceec
Confidence 99999999999996559999999998 6899999999999999754322222 24889999999999986544321
Q ss_pred HhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEE-eCCcEEEEEecCCcc-
Q 010700 179 TLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRI-QNHNLLLAETEGSYT- 256 (503)
Q Consensus 179 ~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i-~gh~~~via~DG~~~- 256 (503)
. ..+.....++.++|||+.. |.+++++| +|||||||+|..+.+.|+| |||+|+||+.||.++
T Consensus 173 ~-~~~~~~~~~d~~liNG~~~--------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~ 236 (451)
T 2uxt_A 173 N-EPGSGGFVGDTLLVNGVQS--------------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLP 236 (451)
T ss_dssp C-CCSSSCCCCSEEEETTEES--------------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEE
T ss_pred c-cccCCCCcCCEEEECCccc--------------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccC
Confidence 1 1122334679999999997 89999999 9999999999999999999 899999999999997
Q ss_pred ceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeeccccc-------cCCCcceEEEEEecCCCCCCCCCCCCCCCCC
Q 010700 257 VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES-------QWKRVTGVAILHYTNSKGKARGPLPEGPNDE 329 (503)
Q Consensus 257 ~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~-------~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~ 329 (503)
+|..++++.|+|||||||+|++++ ++ +|||++........ ........++++|........ +....|.
T Consensus 237 ~P~~~~~l~l~pgeR~dvlv~~~~-~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~~p~-- 311 (451)
T 2uxt_A 237 APVSVKQLSLAPGERREILVDMSN-GD-EVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL-VTDSLPM-- 311 (451)
T ss_dssp EEEEESSEEECTTCEEEEEEECTT-CC-CEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCCS--
T ss_pred CceEeceEEECceeEEEEEEEeCC-CC-EEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcC-ccccCcc--
Confidence 799999999999999999999995 46 89999766432110 011123457888865431100 0000110
Q ss_pred CCccccccccccccccCCCCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhcccccccc
Q 010700 330 FDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVK 409 (503)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~~~~~~~ 409 (503)
.|.+....+. ....++++.|.. .|+|||++|..+..
T Consensus 312 ---------------~L~~~~~~~~--------~~~~~~~~~l~~----------~~~iNg~~f~~~~~----------- 347 (451)
T 2uxt_A 312 ---------------RLLPTEIMAG--------SPIRSRDISLGD----------DPGINGQLWDVNRI----------- 347 (451)
T ss_dssp ---------------CSSSSCCCCC--------CCSEEEEEEECS----------SSSBTTBCCCTTCC-----------
T ss_pred ---------------ccCCCCCCCC--------CCcceEEEEEee----------EEEECCEeCCCCCC-----------
Confidence 1111111000 123455555531 48999999864211
Q ss_pred CccccCCCCCCCCCCCCcceEEEecCCCcEEEEEEeCCCCCCCceeecCCceEEEeeccCCCCCCCCCCCCCCCCCccce
Q 010700 410 GAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTT 489 (503)
Q Consensus 410 ~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~vdivi~N~~~~~HP~HLHGh~F~Vl~~g~g~~~~~~~~~~n~~~p~~RDT 489 (503)
.+.++.|++|+|+|+|. +.||||||||+||||++++. .+++.+|.||||
T Consensus 348 ---------------------~~~~~~G~~~~~~l~N~--~~HP~HLHGh~F~Vl~~~G~--------~~~~~~p~~rDT 396 (451)
T 2uxt_A 348 ---------------------DVTAQQGTWERWTVRAD--EPQAFHIEGVMFQIRNVNGA--------MPFPEDRGWKDT 396 (451)
T ss_dssp ---------------------CEEEETTCEEEEEEEEE--EEEEEEETTCEEEEEEETTB--------CCCGGGSSCBSE
T ss_pred ---------------------cEEcCCCCEEEEEEECC--CCcCeEECCceEEEEeeCCc--------CCCcccCCCccE
Confidence 12457899999999997 79999999999999999643 256778999999
Q ss_pred EEeCCCCcccCcc
Q 010700 490 TQARRHLCSNRNY 502 (503)
Q Consensus 490 v~v~~~g~~~~~~ 502 (503)
|.| +++++|||
T Consensus 397 v~v--g~~~~i~~ 407 (451)
T 2uxt_A 397 VWV--DGQVELLV 407 (451)
T ss_dssp EEE--EEEEEEEE
T ss_pred EEE--CCEEEEEE
Confidence 999 88988876
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=2.7e-70 Score=579.44 Aligned_cols=389 Identities=15% Similarity=0.176 Sum_probs=294.8
Q ss_pred eEEEEEEEEEEE--eCCCCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCC
Q 010700 27 FVYFDFEVSYIT--ASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCP 104 (503)
Q Consensus 27 ~~~~~l~i~~~~--~~~dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~ 104 (503)
+++|+|++++.. +.+||+.+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++.. .+||++ ||+
T Consensus 36 ~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~~--~~~ 111 (534)
T 3abg_A 36 IWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGWA--EDI 111 (534)
T ss_dssp CEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTCS--SSC
T ss_pred eEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCCC--CCC
Confidence 578999999755 67899999999999999999999999999999999999999999999998764 699986 899
Q ss_pred CCCCCceEEEEEeCCCceeeEEccCch----hhhhcCceeeEEEEeCCCCCCCCCC--CCCceEEEEeeeeeCCHHHHHH
Q 010700 105 IPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASGGFGGFIINNRAIIPIPFDT--PDGDITILIGDWYTRNHTALRK 178 (503)
Q Consensus 105 i~PG~~~~y~f~~~~~~Gt~wyH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~--~d~e~~l~l~d~~~~~~~~~~~ 178 (503)
|+||++|+|+|++.+++||||||||.+ .|+++||+|+|||+++.....+++. .++|++|+|+||+++.+.++..
T Consensus 112 i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~~ 191 (534)
T 3abg_A 112 TEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVT 191 (534)
T ss_dssp BSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBCC
T ss_pred CCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCceec
Confidence 999999999999965589999999975 5889999999999998764443332 3678999999999876543321
Q ss_pred HhhcCC-CCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeC-------CcEEEEE
Q 010700 179 TLDAGK-GLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQN-------HNLLLAE 250 (503)
Q Consensus 179 ~~~~~~-~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~g-------h~~~via 250 (503)
..+. ....+|.++|||+.+ +.+++++ ++|||||||+|..+.+.|+|++ |+|+||+
T Consensus 192 --~~~~~~~~~gd~~lvNG~~~--------------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa 254 (534)
T 3abg_A 192 --TNGELNSFWGDVIHVNGQPW--------------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIA 254 (534)
T ss_dssp --CTTCSSCCCCSEEEETTEES--------------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEE
T ss_pred --cCCCCccccCceeccCCccC--------------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEE
Confidence 1111 223579999999987 7889998 5999999999999999999987 9999999
Q ss_pred ecCCc-cceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeec-cccc-cCCCcceEEEEEecCCCCCCCCCCCCCCC
Q 010700 251 TEGSY-TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF-VNES-QWKRVTGVAILHYTNSKGKARGPLPEGPN 327 (503)
Q Consensus 251 ~DG~~-~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~-~~~~-~~~~~~~~~il~y~~~~~~~~~~~p~~p~ 327 (503)
.||++ .+|..++++.|+|||||||+|++++.+|++|||++.... .+.. ........+|++|..............|
T Consensus 255 ~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P- 333 (534)
T 3abg_A 255 SDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP- 333 (534)
T ss_dssp ETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC-
T ss_pred eCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc-
Confidence 99986 579999999999999999999999866757999874321 1100 0011234578888654321000000001
Q ss_pred CCCCccccccccccccccCCCCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhcccccc
Q 010700 328 DEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFK 407 (503)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~~~~~ 407 (503)
..|.+.. .+.+ ....++++.+... ...|+|||++|..+..|++.
T Consensus 334 ----------------~~L~~~~-~p~~-------~~~~~~~~~~~~~-------~~~w~iNG~~f~~~~~p~l~----- 377 (534)
T 3abg_A 334 ----------------ANLRDVP-FPSP-------TTNTPRQFRFGRT-------GPTWTINGVAFADVQNRLLA----- 377 (534)
T ss_dssp ----------------CCCCCCS-CCCC-------CCCCCEEEECSCC-------CSTTCCCCBTTBCTTSCCCC-----
T ss_pred ----------------cccccCC-CCCC-------ccccceEEEEecc-------CceeEECCcccCCCCCccee-----
Confidence 0111100 0111 1123455555321 13589999999765555431
Q ss_pred ccCccccCCCCCCCCCCCCcceEEEecCCCcEEEEEEeCCCC-CCCceeecCCceEEEeeccCCCCCCCCCCCCCCCCCc
Q 010700 408 VKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDT-KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIA 486 (503)
Q Consensus 408 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~vdivi~N~~~-~~HP~HLHGh~F~Vl~~g~g~~~~~~~~~~n~~~p~~ 486 (503)
.++.|++++|+|+|.+. +.||||||||+||||+++.|.+.. ..+++.+ .|
T Consensus 378 -------------------------~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~---~~~~~~~-~~ 428 (534)
T 3abg_A 378 -------------------------NVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNAR---TVMPYES-GL 428 (534)
T ss_dssp -------------------------EECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSS---CCCSGGG-SC
T ss_pred -------------------------eccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcC---cCCcccc-CC
Confidence 24679999999999874 599999999999999996664321 2356666 89
Q ss_pred cceEEeCCCCcccCcc
Q 010700 487 RTTTQARRHLCSNRNY 502 (503)
Q Consensus 487 RDTv~v~~~g~~~~~~ 502 (503)
||||.|++++|++|||
T Consensus 429 rDTV~v~pg~~v~I~~ 444 (534)
T 3abg_A 429 KDVVWLGRRETVVVEA 444 (534)
T ss_dssp BSEECCCSSEEEEEEE
T ss_pred cCeEEcCCCCEEEEEE
Confidence 9999999999999997
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=1e-69 Score=574.78 Aligned_cols=396 Identities=18% Similarity=0.206 Sum_probs=290.2
Q ss_pred CceEEEEEEEEEEEeCC--CCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCC----------------------Ce
Q 010700 25 DLFVYFDFEVSYITASP--LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE----------------------SL 80 (503)
Q Consensus 25 ~~~~~~~l~i~~~~~~~--dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~----------------------~~ 80 (503)
.+..+|+|++++....+ ++..+.+|+|||++|||+|+|++||+|+|+|+|+|+. ++
T Consensus 23 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~t 102 (513)
T 2wsd_A 23 KEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKT 102 (513)
T ss_dssp SSCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCB
T ss_pred CCceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCc
Confidence 34566999999998654 5678999999999999999999999999999999975 89
Q ss_pred eEEEccCCCCCCCCCCCCCC---CCCCCCCCCce---EEEEEeCCCceeeEEccCch----hhhhcCceeeEEEEeCCCC
Q 010700 81 LIHWSGIQQRRSSWQDGLLG---TNCPIPPKWNW---TYQFQVKDQVGSFFYFPSLH----FQRASGGFGGFIINNRAII 150 (503)
Q Consensus 81 siH~HG~~~~~~~~~DG~~~---~q~~i~PG~~~---~y~f~~~~~~Gt~wyH~H~~----~q~~~Gl~G~liV~~~~~~ 150 (503)
+|||||+++. +++||+++ +||+|+||++| +|+|++.+++||||||||.. .|+++||+|+|||+++.+.
T Consensus 103 siHwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~ 180 (513)
T 2wsd_A 103 VVHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEK 180 (513)
T ss_dssp CEEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGG
T ss_pred EEEcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccc
Confidence 9999999876 57999984 78999999555 99999866799999999975 5899999999999998654
Q ss_pred CCCCCCCCCceEEEEeeeeeCCHHHHHHHhhc-----------CCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEe
Q 010700 151 PIPFDTPDGDITILIGDWYTRNHTALRKTLDA-----------GKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVH 219 (503)
Q Consensus 151 ~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~-----------~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~ 219 (503)
..+++.+|+|++|+|+||+++.+.++...... ......++.+||||+.+ +.++++
T Consensus 181 ~~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~--------------p~~~v~ 246 (513)
T 2wsd_A 181 RLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW--------------PYLEVE 246 (513)
T ss_dssp GGCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES--------------CEEECC
T ss_pred cccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc--------------ceEEec
Confidence 44445678999999999999865433211100 01123579999999998 889999
Q ss_pred CCcEEEEEEeEeCCCCeeeEEEeCC-cEEEEEecCCcc-ceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeecccc
Q 010700 220 PGKTYRIRVHNVGISTSLNFRIQNH-NLLLAETEGSYT-VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNE 297 (503)
Q Consensus 220 ~G~~~rlRliN~g~~~~~~~~i~gh-~~~via~DG~~~-~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~ 297 (503)
++ +|||||||+|..+.+.|+|+|| +|+||+.||.++ +|..++++.|+|||||||+|++++.+|..++++.... +.
T Consensus 247 ~~-~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~--~~ 323 (513)
T 2wsd_A 247 PR-KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAG--CG 323 (513)
T ss_dssp SS-EEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCC--SS
T ss_pred CC-EEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEeccc--cc
Confidence 85 8999999999999999999999 999999999998 7999999999999999999999986672344433221 11
Q ss_pred ccCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCCCCCCCCCCCcCccceeEEEEEecCCC
Q 010700 298 SQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPP 377 (503)
Q Consensus 298 ~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~ 377 (503)
.........++++|..+...........|. .+.... ..+. .....++++.|...+
T Consensus 324 ~~~~~~~~~~il~~~~~~~~~~~~~~~~p~-------~l~~~~----------~~~~-------~~~~~~~~~~l~~~~- 378 (513)
T 2wsd_A 324 GDVNPETDANIMQFRVTKPLAQKDESRKPK-------YLASYP----------SVQH-------ERIQNIRTLKLAGTQ- 378 (513)
T ss_dssp SSCCTTTTTEEEEEECCSCCSSCCCCCCCS-------BCSCCG----------GGCC-------CCEEEEEEEEEEEEE-
T ss_pred ccCCCCCCcceEEEEeccCcccCccCCCCc-------cccCCC----------Cccc-------CCCcceEEEEEEeec-
Confidence 111112345788886543110000000111 010000 0000 012345666665422
Q ss_pred CccCCeEEEEecCccCCCCCCchhccccccccCccccCCCCCCCCCCCCcceEEEecCCCcEEEEEEeCCCCCCCceeec
Q 010700 378 EMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMS 457 (503)
Q Consensus 378 ~~~~~~~~~~iN~~s~~~~~~P~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~vdivi~N~~~~~HP~HLH 457 (503)
...+...|+|||++|..+. .+.++.|++|+|+|+|.+.+.||||||
T Consensus 379 -~~~g~~~~~iNg~~~~~~~---------------------------------~~~~~~g~~~~w~l~N~~~~~HP~HlH 424 (513)
T 2wsd_A 379 -DEYGRPVLLLNNKRWHDPV---------------------------------TETPKVGTTEIWSIINPTRGTHPIHLH 424 (513)
T ss_dssp -CTTSCEEEEETTBCTTSCC---------------------------------CBCCBTTCEEEEEEEECSSSCEEEEES
T ss_pred -CCCCCceEeECCccCCCcc---------------------------------cEecCCCCEEEEEEEcCCCCCcCEeEe
Confidence 1234567999999985321 012467999999999998899999999
Q ss_pred CCceEEEeeccC---CCCCCCCCCCCCCC---------CCccceEEeCCCCcccC
Q 010700 458 GYAFFVVGMDYG---EWTDNSRGTYNKWD---------GIARTTTQARRHLCSNR 500 (503)
Q Consensus 458 Gh~F~Vl~~g~g---~~~~~~~~~~n~~~---------p~~RDTv~v~~~g~~~~ 500 (503)
||+||||+++.+ .|++. ..+|+.+ |.|||||.|+++||++|
T Consensus 425 G~~F~Vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i 477 (513)
T 2wsd_A 425 LVSFRVLDRRPFDIARYQES--GELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRI 477 (513)
T ss_dssp SCCEEEEEEEEBCHHHHHHH--CCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEE
T ss_pred CceEEEEEecCccccccccc--ccccccCCCCCCCccccCcccEEEeCCCCEEEE
Confidence 999999999753 22211 1233333 45999999999999865
No 13
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=2e-69 Score=562.47 Aligned_cols=358 Identities=16% Similarity=0.215 Sum_probs=275.0
Q ss_pred EEEcCC-CCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEc
Q 010700 49 IAINGK-FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYF 127 (503)
Q Consensus 49 ~~~Ng~-~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH 127 (503)
|+|||+ +|||+||+++||+|+|+|+|+|+++++|||||+++. +++||+++ |+|+||++|+|+|++++++||||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i~PG~~~~Y~f~~~~~~GT~wYH 103 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAITPGESYNYSFDVVNRAGTYLYH 103 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTCGG--GCBCTTCEEEEEEECCSCSEEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCCCC--ccCCCCCEEEEEEEcCCCCCceEec
Confidence 999999 999999999999999999999999999999999875 57999996 9999999999999997579999999
Q ss_pred cC----chhhhhcCceeeEEEEeCCCCCCCCCCCC-CceEEEEeeeeeCCHHHHHHH--hhcCCCCCCCCeEEECCcCCC
Q 010700 128 PS----LHFQRASGGFGGFIINNRAIIPIPFDTPD-GDITILIGDWYTRNHTALRKT--LDAGKGLGMPDGVLINGKGPY 200 (503)
Q Consensus 128 ~H----~~~q~~~Gl~G~liV~~~~~~~~~~~~~d-~e~~l~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~liNG~~~~ 200 (503)
|| ++.|+++||+|+|||++++.. .+.+ +| +|++|+++||+++. .++... .........++.++|||+..
T Consensus 104 ~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~liNG~~~- 179 (448)
T 3aw5_A 104 PHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNGVKD- 179 (448)
T ss_dssp ECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEETTEET-
T ss_pred cCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-CcccccccccccccCccccEEEECCccc-
Confidence 99 779999999999999998654 2222 35 89999999999986 432110 00001123578999999997
Q ss_pred CCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEE--eC---CcEEEEEecCCccc-eeeecEEEEcCCceEEE
Q 010700 201 QYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRI--QN---HNLLLAETEGSYTV-QQNYTSLDIHVGQSYSF 274 (503)
Q Consensus 201 ~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i--~g---h~~~via~DG~~~~-p~~~d~v~l~pGeR~dv 274 (503)
+.+++++| +|||||||+|..+.+.|+| +| |+|+||+.||.+++ |..++++.|+|||||||
T Consensus 180 -------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dv 245 (448)
T 3aw5_A 180 -------------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEV 245 (448)
T ss_dssp -------------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEE
T ss_pred -------------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEE
Confidence 89999999 9999999999999999999 99 99999999999998 99999999999999999
Q ss_pred EEEeCCCCCcceEEEEeeeccccc----------cCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCccccccccccccc
Q 010700 275 LVTMDQNASTDYYIVASARFVNES----------QWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRW 344 (503)
Q Consensus 275 lv~~~~~~g~~y~i~~~~~~~~~~----------~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~ 344 (503)
+|++++ + .|||++.....+.. ........++++|.++..... |. .+..
T Consensus 246 lv~~~~--~-~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~-------~L~~------ 303 (448)
T 3aw5_A 246 VVELGE--G-VYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP------VE-------ALSD------ 303 (448)
T ss_dssp EEEECS--E-EEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC------CC-------CCSC------
T ss_pred EEECCC--C-ceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC------cc-------ccCC------
Confidence 999983 5 89999876532110 011134567888865532111 11 0100
Q ss_pred cCCCCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhccccccccCccccCCCCCCCCCC
Q 010700 345 NVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGP 424 (503)
Q Consensus 345 ~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~~~~~~~~~~~~~~~~~p~~~~ 424 (503)
+.+ .+. ....++++.|... ...|+|||++|..+ .|.
T Consensus 304 -lp~---~~~--------~~~~~~~~~l~~~-------~~~~~iNg~~~~~~-~p~------------------------ 339 (448)
T 3aw5_A 304 -PPP---EPP--------KPTRTRRFALSLS-------GMQWTINGMFWNAS-NPL------------------------ 339 (448)
T ss_dssp -CCC---CCC--------CCSEEEEEEEEEE-------TTEEEETTBCCCTT-CTT------------------------
T ss_pred -CCC---CCC--------CCCceEEEEEeCC-------CceeeECCCcCCCC-CCc------------------------
Confidence 000 000 1234567766541 13599999999632 221
Q ss_pred CCcceEEEe-cCCCcEEEEEEeCCC-CCCCceeecCCceEEEeeccCCCCC-CCCCCC----CCCCCCccceEEeCCCCc
Q 010700 425 PRMETSVIN-GTYRGFMEVILQNND-TKMHAYHMSGYAFFVVGMDYGEWTD-NSRGTY----NKWDGIARTTTQARRHLC 497 (503)
Q Consensus 425 ~~~~~~~~~-~~~g~~vdivi~N~~-~~~HP~HLHGh~F~Vl~~g~g~~~~-~~~~~~----n~~~p~~RDTv~v~~~g~ 497 (503)
+. ++.|++|+|+|+|.+ .+.||||||||+||||+++ |.+.. .....+ +..+|.|||||.|+++||
T Consensus 340 -------~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~ 411 (448)
T 3aw5_A 340 -------FEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGET 411 (448)
T ss_dssp -------CCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCE
T ss_pred -------eeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCE
Confidence 12 467999999999998 8899999999999999995 44431 111222 344567999999999999
Q ss_pred ccCc--c
Q 010700 498 SNRN--Y 502 (503)
Q Consensus 498 ~~~~--~ 502 (503)
++|+ |
T Consensus 412 ~~i~vrF 418 (448)
T 3aw5_A 412 VKIVVNF 418 (448)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9665 7
No 14
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.4e-67 Score=549.64 Aligned_cols=386 Identities=18% Similarity=0.205 Sum_probs=287.0
Q ss_pred hhhcCCceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCC
Q 010700 20 LCSAADLFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGL 98 (503)
Q Consensus 20 ~~~~~~~~~~~~l~i~~~~~~~-dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~ 98 (503)
...+.+++++|+|++++..+++ +|+.+.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++. +++||+
T Consensus 43 ~~~~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~ 120 (481)
T 3zx1_A 43 NESKEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVP--PDQDGS 120 (481)
T ss_dssp CCCCSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCC--GGGSCC
T ss_pred CcccCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccC--CccCCC
Confidence 3456778899999999999987 6999999999999999999999999999999999999999999999874 689998
Q ss_pred CCCCCCCCCCCceEEEEEeCCC-ceeeEEccCc----hhhhhcCceeeEEEEeCCCCCCCCCCCCCceEEEEeeeeeCCH
Q 010700 99 LGTNCPIPPKWNWTYQFQVKDQ-VGSFFYFPSL----HFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNH 173 (503)
Q Consensus 99 ~~~q~~i~PG~~~~y~f~~~~~-~Gt~wyH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~ 173 (503)
+ ||+|+||++|+|+|+++++ +||||||||. +.|+++||+|+|||+++++...++ ++++ |+++||+++..
T Consensus 121 p--q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~ 194 (481)
T 3zx1_A 121 P--HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDEN 194 (481)
T ss_dssp T--TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTT
T ss_pred c--cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCC
Confidence 7 8999999999999999643 7999999995 589999999999999987543322 4454 99999999765
Q ss_pred HHHHHH-hhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEec
Q 010700 174 TALRKT-LDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETE 252 (503)
Q Consensus 174 ~~~~~~-~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~D 252 (503)
.++... .........++.++|||+.. |.+++++|+ ||||||+|..+.+.|+|+||+|+||+.|
T Consensus 195 g~~~~~~~~~~~~g~~gd~~lvNG~~~--------------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~D 258 (481)
T 3zx1_A 195 AQIPNNNLNDWLNGREGEFVLINGQFK--------------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTD 258 (481)
T ss_dssp SCCCCCCHHHHHHCCCCSEEEETTEES--------------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEET
T ss_pred CccccccchhhccCCcCCEEEECCccC--------------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcC
Confidence 432100 00000112578999999987 899999998 9999999999999999999999999999
Q ss_pred CCcc-ceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeecccccc-CCCcceEEEEEecCCCCCCCCCCCCCCCCCC
Q 010700 253 GSYT-VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQ-WKRVTGVAILHYTNSKGKARGPLPEGPNDEF 330 (503)
Q Consensus 253 G~~~-~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~~-~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~ 330 (503)
|+++ +|..++++.|+|||||||+|++++ ++ .|.|.+......... ........+++...... ..++|..
T Consensus 259 Gg~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~-~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~lP~~----- 329 (481)
T 3zx1_A 259 GGLIEKTIYKEELFLSPASRVEVLIDAPK-DG-NFKLESAYYDRDKMMVKEEPNTLFLANINLKKE--NVELPKN----- 329 (481)
T ss_dssp TEEEEEEEEESSEEECTTCEEEEEEECSS-CE-EEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC--CCCCCSC-----
T ss_pred CCccCCceEeCeEEECCccEEEEEEEcCC-Cc-EEEEEEecccccCccccCCCCceeEEEEecCCC--CccCCcc-----
Confidence 8775 799999999999999999999985 45 788877543221100 00112223333321110 0111110
Q ss_pred CccccccccccccccCCCCCCCCCCCCCCCcCccceeEEEEEecCCCC--cc--CCe--------EEEEecCccCCCCCC
Q 010700 331 DKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPE--MI--DGK--------RRATLSGISFVNPST 398 (503)
Q Consensus 331 ~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~--~~--~~~--------~~~~iN~~s~~~~~~ 398 (503)
|.+..+.+ ..+.++++.|...+.. .. .+. ..|+|||+.|.. +.
T Consensus 330 ---------------l~~~~~~~---------~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~-~~ 384 (481)
T 3zx1_A 330 ---------------LKIFKPSE---------EPKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDL-KR 384 (481)
T ss_dssp ---------------SCCCCCCC---------CCCEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCT-TC
T ss_pred ---------------ccCCCCCC---------CCCcEEEEEEeccchhcccccccccccccccccceeEECCEeCCC-CC
Confidence 11100001 1124566666542210 00 001 249999998842 11
Q ss_pred chhccccccccCccccCCCCCCCCCCCCcceEEEecCCCcEEEEEEeCCCCCCCceeecCCceEEEee--ccCCCCCCCC
Q 010700 399 PIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGM--DYGEWTDNSR 476 (503)
Q Consensus 399 P~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~vdivi~N~~~~~HP~HLHGh~F~Vl~~--g~g~~~~~~~ 476 (503)
| .+.++.|++|+|+|.|.+.+.||||||||+|+|+++ ++...
T Consensus 385 ~-------------------------------~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~~----- 428 (481)
T 3zx1_A 385 I-------------------------------DLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQ----- 428 (481)
T ss_dssp C-------------------------------CEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEEEEETTEEE-----
T ss_pred c-------------------------------eEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEEecccCCCC-----
Confidence 1 134578999999999999999999999999999998 33221
Q ss_pred CCCCCCCCCccceEEeCCCCcccCcc
Q 010700 477 GTYNKWDGIARTTTQARRHLCSNRNY 502 (503)
Q Consensus 477 ~~~n~~~p~~RDTv~v~~~g~~~~~~ 502 (503)
...++.|||||.|+|+++++|||
T Consensus 429 ---~~~~~~~kDTv~v~Pg~~~~i~~ 451 (481)
T 3zx1_A 429 ---KAEFRALRDTINVRPNEELRLRM 451 (481)
T ss_dssp ---ECSSCCEESEEEECTTCEEEEEE
T ss_pred ---CcccCcccceEEECCCCEEEEEE
Confidence 12357899999999999999987
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=3.1e-66 Score=562.87 Aligned_cols=416 Identities=14% Similarity=0.136 Sum_probs=277.3
Q ss_pred CceEEEEEEEEEEEe--CCCCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCC-----------------------
Q 010700 25 DLFVYFDFEVSYITA--SPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDES----------------------- 79 (503)
Q Consensus 25 ~~~~~~~l~i~~~~~--~~dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~----------------------- 79 (503)
...+.|+|++++... .+|+..+.+|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 30 ~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~ 109 (612)
T 3gyr_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccc
Confidence 345788899888875 4566788999999999999999999999999999999654
Q ss_pred ------------------eeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCc----hhhhhcC
Q 010700 80 ------------------LLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL----HFQRASG 137 (503)
Q Consensus 80 ------------------~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~----~~q~~~G 137 (503)
++|||||+++. +++||++ ||+|+||++|+|+|++.+++||||||||. +.|+++|
T Consensus 110 ~~~~~~~~~~~~~~~~~~ttiHwHGl~~~--~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~G 185 (612)
T 3gyr_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAG 185 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTT
T ss_pred ccccccccccccccCCCCceEEcCCCccC--CcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhcc
Confidence 67899999874 6799987 99999999999999996568999999996 5899999
Q ss_pred ceeeEEEEeCCCCCCCCCCCCCceEEEEeeeeeCCHHHHHHHh---------hc-----C---CCCCCCCeEEECCcCCC
Q 010700 138 GFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTL---------DA-----G---KGLGMPDGVLINGKGPY 200 (503)
Q Consensus 138 l~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~---------~~-----~---~~~~~~~~~liNG~~~~ 200 (503)
|+|+|||+++++...+.+.+++|++|+|+||+++.+.+..... .. + .....++.++|||+.+
T Consensus 186 l~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~- 264 (612)
T 3gyr_A 186 LYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW- 264 (612)
T ss_dssp CEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES-
T ss_pred ceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc-
Confidence 9999999998765555567899999999999986543221100 00 0 0112468899999987
Q ss_pred CCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCc-------EEEEEecCCccc-eeee------cEEEE
Q 010700 201 QYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHN-------LLLAETEGSYTV-QQNY------TSLDI 266 (503)
Q Consensus 201 ~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~-------~~via~DG~~~~-p~~~------d~v~l 266 (503)
+.+.++. ++|||||||+|..+.+.|+|++|. |+|||+||++++ |..+ +.|.|
T Consensus 265 -------------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i 330 (612)
T 3gyr_A 265 -------------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSA 330 (612)
T ss_dssp -------------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEE
T ss_pred -------------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEe
Confidence 8888875 589999999999999999999984 999999999984 5544 58999
Q ss_pred cCCceEEEEEEeCCCCCcceEEEEeeeccccc---cCCCcceEEEEEecCCCCC--CCCCCCCCCCCCC-Cccccccccc
Q 010700 267 HVGQSYSFLVTMDQNASTDYYIVASARFVNES---QWKRVTGVAILHYTNSKGK--ARGPLPEGPNDEF-DKTFSMNQAR 340 (503)
Q Consensus 267 ~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~---~~~~~~~~~il~y~~~~~~--~~~~~p~~p~~~~-~~~~~~~~~~ 340 (503)
+|||||||+|++++.++..++++......... .........+++|...... ....+|....... ..........
T Consensus 331 ~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 410 (612)
T 3gyr_A 331 APAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGH 410 (612)
T ss_dssp CTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEE
T ss_pred ccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCccccccccccccccccccccccc
Confidence 99999999999998877334444332211110 1122333456666433211 1111111000000 0000000000
Q ss_pred cccccCCCCCCCCCCCCCCCcCccceeEEEEEecCCC---------------CccCCeEEEEecCccCCCCCCchhcccc
Q 010700 341 SIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPP---------------EMIDGKRRATLSGISFVNPSTPIRLADW 405 (503)
Q Consensus 341 ~~~~~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~---------------~~~~~~~~~~iN~~s~~~~~~P~l~~~~ 405 (503)
... .+....... .........+..... ........|.+|++.|.
T Consensus 411 ~~~-~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~----------- 469 (612)
T 3gyr_A 411 RLI-VLTPPGTKG---------SGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTFN----------- 469 (612)
T ss_dssp EEE-EEECTTCTT---------TTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECSTT-----------
T ss_pred ccc-ccccccccc---------ccccccccccccccccccccccccceeeeccCCCccccccccCccCC-----------
Confidence 000 000000000 000000000000000 00000112222222221
Q ss_pred ccccCccccCCCCCCCCCCCCcceEEEecCCCcEEEEEEeCCCCCCCceeecCCceEEEeeccCCCCCC-----------
Q 010700 406 FKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDN----------- 474 (503)
Q Consensus 406 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~vdivi~N~~~~~HP~HLHGh~F~Vl~~g~g~~~~~----------- 474 (503)
....+.++.|++|+|+|+|.+.+.||||||||+||||+++.+.++..
T Consensus 470 ----------------------~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~ 527 (612)
T 3gyr_A 470 ----------------------DGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPV 527 (612)
T ss_dssp ----------------------SCCCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCE
T ss_pred ----------------------CCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCcccccccccccccc
Confidence 12234578899999999999999999999999999999875543211
Q ss_pred -----CCCCCCCCCCCccceEEeCCCCcccCcc
Q 010700 475 -----SRGTYNKWDGIARTTTQARRHLCSNRNY 502 (503)
Q Consensus 475 -----~~~~~n~~~p~~RDTv~v~~~g~~~~~~ 502 (503)
.....+..++.|||||.|+++||++|||
T Consensus 528 ~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~ 560 (612)
T 3gyr_A 528 RLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMG 560 (612)
T ss_dssp EEEEEEECCCCTTCSSCBSEEEECSSEEEEEEE
T ss_pred ccccccccCcccccCCCCcEEEECCCCEEEEEE
Confidence 0123567788999999999999999987
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=8.1e-66 Score=536.03 Aligned_cols=389 Identities=18% Similarity=0.222 Sum_probs=279.3
Q ss_pred CceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCC
Q 010700 25 DLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCP 104 (503)
Q Consensus 25 ~~~~~~~l~i~~~~~~~dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~ 104 (503)
...++|+|++++..++++|+++.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++. +++||++ ||+
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~p--~~~ 90 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--QGI 90 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--HHHHCCT--TCC
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccC--cccCCCC--cCc
Confidence 345789999999999999999999999999999999999999999999999999999999999876 4699987 899
Q ss_pred CCCCCceEEEEEeCCCceeeEEccCc----hhhhhcCceeeEEEEeCCCCCCCCC--CCCCceEEEEeeeeeCCHHHHHH
Q 010700 105 IPPKWNWTYQFQVKDQVGSFFYFPSL----HFQRASGGFGGFIINNRAIIPIPFD--TPDGDITILIGDWYTRNHTALRK 178 (503)
Q Consensus 105 i~PG~~~~y~f~~~~~~Gt~wyH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~--~~d~e~~l~l~d~~~~~~~~~~~ 178 (503)
|+||++|+|+|++.+++||||||||. +.|+++||+|+|||+++.....+++ ...+|++|+|+||+++.+.++..
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~ 170 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDY 170 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCC
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceec
Confidence 99999999999996558999999996 5899999999999999765332222 23568999999999975543211
Q ss_pred Hhh--cCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEE-eCCcEEEEEecCCc
Q 010700 179 TLD--AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRI-QNHNLLLAETEGSY 255 (503)
Q Consensus 179 ~~~--~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i-~gh~~~via~DG~~ 255 (503)
..+ .......++.++|||+.+ |.+.+ +|++|||||||+|..+.+.|+| +||+|+||+.||++
T Consensus 171 ~~~~~~~~~g~~gd~~lvNG~~~--------------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~ 235 (488)
T 3od3_A 171 QLDVMTAAVGWFGDTLLTNGAIY--------------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGL 235 (488)
T ss_dssp CCSHHHHHHCCCCSEEEETTBSS--------------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEE
T ss_pred cccccccccCCCCCEEEEcCCcC--------------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCc
Confidence 000 000123568999999987 66766 5789999999999999999999 69999999999998
Q ss_pred c-ceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeeccccccCC-CcceEEEEEecCCCCCCCCCCCCCCCCCCCcc
Q 010700 256 T-VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWK-RVTGVAILHYTNSKGKARGPLPEGPNDEFDKT 333 (503)
Q Consensus 256 ~-~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~-~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~ 333 (503)
+ +|..++++.|+|||||||+|++++ ++ .|++++........... ......+++...........+|..
T Consensus 236 l~~P~~~~~l~l~pGeR~dvlv~~~~-~~-~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~-------- 305 (488)
T 3od3_A 236 LPEPVKVSELPVLMGERFEVLVEVND-NK-PFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDT-------- 305 (488)
T ss_dssp EEEEEEESCEEECTTCEEEEEEEECT-TC-CEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSC--------
T ss_pred ccCccEeceEEECCCCEEEEEEEeCC-Cc-eEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCcc--------
Confidence 6 799999999999999999999995 45 79998754322110000 011122222221100000111110
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCcCccceeEEEEEecC-------------------CCCc---------cCC---
Q 010700 334 FSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNK-------------------PPEM---------IDG--- 382 (503)
Q Consensus 334 ~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~-------------------~~~~---------~~~--- 382 (503)
|.+.. +.|. .....++++.|... +... ..|
T Consensus 306 ------------L~~~~--~~~~-----~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 366 (488)
T 3od3_A 306 ------------LSSLP--ALPS-----LEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMN 366 (488)
T ss_dssp ------------CCCCC--CCCC-----CTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCC
T ss_pred ------------cccCC--CCcc-----cccccceEEEEEecccccccccccccccccccccccccccccccccccCccc
Confidence 00000 0000 00112344444210 0000 001
Q ss_pred ------e----EEEEecCccCCCCCCchhccccccccCccccCCCCCCCCCCCCcceEEEecCCCcEEEEEEeCCC-CCC
Q 010700 383 ------K----RRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNND-TKM 451 (503)
Q Consensus 383 ------~----~~~~iN~~s~~~~~~P~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~vdivi~N~~-~~~ 451 (503)
. ..|+|||++|.. +.| .+.++.|++++|.|.|.+ .+.
T Consensus 367 ~~~~g~~~~~~~~~~ING~~~~~-~~~-------------------------------~~~~~~G~~e~w~l~N~~~~~~ 414 (488)
T 3od3_A 367 HMNHGGKFDFHHANKINGQAFDM-NKP-------------------------------MFAAAKGQYERWVISGVGDMML 414 (488)
T ss_dssp CSCCCGGGCGGGCEEETTBCCCT-TCC-------------------------------SEECCBSSCEEEEEECTTCCCC
T ss_pred cccccccccccceeeECCeeCCC-CCC-------------------------------ceEcCCCCEEEEEEEeCCCCCC
Confidence 0 138999999852 112 134678999999999988 579
Q ss_pred CceeecCCceEEEeeccCCCCCCCCCCCCCCCCCccceEEeCCCCcccCcc
Q 010700 452 HAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQARRHLCSNRNY 502 (503)
Q Consensus 452 HP~HLHGh~F~Vl~~g~g~~~~~~~~~~n~~~p~~RDTv~v~~~g~~~~~~ 502 (503)
||||||||+|+|+++++.... ..++.|||||.|+ ++.++|+|
T Consensus 415 Hp~HlHg~~F~Vl~~~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~ 456 (488)
T 3od3_A 415 HPFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVE-GNVSEVLV 456 (488)
T ss_dssp EEEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEES-SSEEEEEE
T ss_pred ccEEEcCceEEEeccCCCccc--------cccCCceeEEEeC-CCEEEEEE
Confidence 999999999999998644221 2246799999999 88888765
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=2.8e-64 Score=537.23 Aligned_cols=416 Identities=14% Similarity=0.142 Sum_probs=287.9
Q ss_pred CceEEEEEEEEEEEeCC--CCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCC-----------------------
Q 010700 25 DLFVYFDFEVSYITASP--LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDES----------------------- 79 (503)
Q Consensus 25 ~~~~~~~l~i~~~~~~~--dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~----------------------- 79 (503)
...++|+|++++....+ |+..+.+|+|||++|||+|+|++||+|+|+|+|+|+..
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 44689999999998764 45689999999999999999999999999999999853
Q ss_pred ------------------eeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCch----hhhhcC
Q 010700 80 ------------------LLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASG 137 (503)
Q Consensus 80 ------------------~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~----~q~~~G 137 (503)
+++||||+++.. .+||++ ||+|+||++|+|+|++.+++||||||||.. .|+++|
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~--~~DG~p--~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~G 185 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAG 185 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG--GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCC--ccCCCC--cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhcc
Confidence 899999998764 599987 899999999999999965799999999975 499999
Q ss_pred ceeeEEEEeCCCCCCCCCCCCCceEEEEeeeeeCCHHH--HHH-------Hhhc---C-C----CCCCCCeEEECCcCCC
Q 010700 138 GFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTA--LRK-------TLDA---G-K----GLGMPDGVLINGKGPY 200 (503)
Q Consensus 138 l~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~--~~~-------~~~~---~-~----~~~~~~~~liNG~~~~ 200 (503)
|+|+|||++++....+++.+|+|++|+|+||+++.+.. +.. .+.. + . ....++.+||||+.+
T Consensus 186 L~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~- 264 (612)
T 2g23_A 186 LYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW- 264 (612)
T ss_dssp CEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES-
T ss_pred ceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC-
Confidence 99999999986544444567999999999999975421 100 0010 1 0 113579999999998
Q ss_pred CCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCC-------cEEEEEecCCcc-ceeeec------EEEE
Q 010700 201 QYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNH-------NLLLAETEGSYT-VQQNYT------SLDI 266 (503)
Q Consensus 201 ~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh-------~~~via~DG~~~-~p~~~d------~v~l 266 (503)
+.++|++| +|||||||+|..+.+.|+|++| +|+||+.||+++ +|..++ +|.|
T Consensus 265 -------------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l 330 (612)
T 2g23_A 265 -------------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSA 330 (612)
T ss_dssp -------------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEE
T ss_pred -------------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEE
Confidence 89999999 9999999999999999999999 899999999999 589999 9999
Q ss_pred cCCceEEEEEEeCCCCCcceEEEEeeeccccccC---CCcceEEEE--EecCCCCCCCCCCCCCCCCCC-Cccccccccc
Q 010700 267 HVGQSYSFLVTMDQNASTDYYIVASARFVNESQW---KRVTGVAIL--HYTNSKGKARGPLPEGPNDEF-DKTFSMNQAR 340 (503)
Q Consensus 267 ~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~---~~~~~~~il--~y~~~~~~~~~~~p~~p~~~~-~~~~~~~~~~ 340 (503)
+|||||||+|++++.+|++|+|+........... ......-|+ ++..........+|..-.... .....+....
T Consensus 331 ~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~ 410 (612)
T 2g23_A 331 APAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGH 410 (612)
T ss_dssp CTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEE
T ss_pred CCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccce
Confidence 9999999999999877768999876421111000 001111234 333322111111221000000 0000000000
Q ss_pred cccccCCCCCCCCCCCCCCCcCccceeEEEEEecC-------CC-------CccCC-eEEEEecCccCCCCCCchhcccc
Q 010700 341 SIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNK-------PP-------EMIDG-KRRATLSGISFVNPSTPIRLADW 405 (503)
Q Consensus 341 ~~~~~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~-------~~-------~~~~~-~~~~~iN~~s~~~~~~P~l~~~~ 405 (503)
... .+.+ |. ..+.+...+.+.+... .+ ...+| ...|+|||+.|...
T Consensus 411 r~~-~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~~--------- 471 (612)
T 2g23_A 411 RLI-VLTP------PG---TKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFNDG--------- 471 (612)
T ss_dssp EEE-EECC------TT---CTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTSC---------
T ss_pred eEE-eecc------cc---ccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCCC---------
Confidence 000 0000 00 0000000001111000 00 00122 24578888877421
Q ss_pred ccccCccccCCCCCCCCCCCCcceEEEecCCCcEEEEEEeCCCCCCCceeecCCceEEEeeccCCCC---CC--------
Q 010700 406 FKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWT---DN-------- 474 (503)
Q Consensus 406 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~vdivi~N~~~~~HP~HLHGh~F~Vl~~g~g~~~---~~-------- 474 (503)
..+.++.|++|+|.|.|.+.+.||||||||+|+||+++.+.++ ..
T Consensus 472 ------------------------~~~~v~~G~~v~w~l~N~~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~ 527 (612)
T 2g23_A 472 ------------------------LGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPV 527 (612)
T ss_dssp ------------------------CCEEEETTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCE
T ss_pred ------------------------CceEecCCCEEEEEEEeCCCCCCCeEEcCceEEEecccCcccccccccccCccccc
Confidence 1234578999999999999899999999999999998643221 10
Q ss_pred -----CCCCCCCCCCCccceEEeCCCCcccCcc
Q 010700 475 -----SRGTYNKWDGIARTTTQARRHLCSNRNY 502 (503)
Q Consensus 475 -----~~~~~n~~~p~~RDTv~v~~~g~~~~~~ 502 (503)
....++..++.|||||.|+|+++++|||
T Consensus 528 ~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~ 560 (612)
T 2g23_A 528 RLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMG 560 (612)
T ss_dssp EEEEEEECCCCTTSSSCBSEEEECSSEEEEEEE
T ss_pred ccccccccCCCcccccccCeEEECCCcEEEEEE
Confidence 0023556677899999999999999987
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=2.1e-53 Score=422.77 Aligned_cols=271 Identities=22% Similarity=0.313 Sum_probs=225.8
Q ss_pred ceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCC-CCC
Q 010700 26 LFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNC 103 (503)
Q Consensus 26 ~~~~~~l~i~~~~~~~-dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~ 103 (503)
.+|+|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++..+.++||+|+ +||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 3799999999999887 58899999999999999999999999999999999999999999999988789999998 999
Q ss_pred CCCCCCceEEEEEeCCCceeeEEccCchhhh---hcCceeeEEEEeCCCCCCCCCCCCCceEEEEeeeeeCCHHHHHHHh
Q 010700 104 PIPPKWNWTYQFQVKDQVGSFFYFPSLHFQR---ASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTL 180 (503)
Q Consensus 104 ~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~---~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~ 180 (503)
+|+||++++|+|++ +++||||||||...+. .+||+|+|||+++...+.+ ..+|+|++|+++||+++..... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~-~~~d~e~~l~l~dw~~~~~~~~---~ 155 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIE-KTVTKDYILMLSDWVSSWANKP---G 155 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHH-HTCCEEEEEEEEEECGGGTTCT---T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCccccc-ccccceeEEEEEeecccccccc---c
Confidence 99999999999999 5899999999987543 4899999999987542211 1458999999999987643211 1
Q ss_pred hcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCcc-cee
Q 010700 181 DAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT-VQQ 259 (503)
Q Consensus 181 ~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~-~p~ 259 (503)
..+.....++.++|||+.++. ...+++++|++|||||+|++.. .|.||||||.|+||+.||.++ +|.
T Consensus 156 ~~~~~~~~~d~~~ING~~~~~-----------~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~ 223 (318)
T 3g5w_A 156 EGGIPGDVFDYYTINAKSFPE-----------TQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPI 223 (318)
T ss_dssp CCCCTTCCCCEEEETTBCBTS-----------SCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEE
T ss_pred cCCCCCCcCcEEEEcCcCCCC-----------CccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCc
Confidence 112222357899999998732 2569999999999999999976 799999999999999999997 688
Q ss_pred eecEEEEcCCceEEEEEEeCCCCCcceEEEEeeeccccc-cCCCcceEEEEEecCCC
Q 010700 260 NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES-QWKRVTGVAILHYTNSK 315 (503)
Q Consensus 260 ~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~-~~~~~~~~~il~y~~~~ 315 (503)
.+|++.|.||||+||++++++ +| .|.++++....... ........++|+|++..
T Consensus 224 ~~dtv~l~pger~~v~~~a~~-pG-~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 224 KGDTVLIGPGERYDVILNMDN-PG-LWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EESEEEECTTCEEEEEEECCS-CS-EEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred cccEEEECCCCEEEEEEECCC-Ce-eEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999999999999996 57 88888887543321 11123457899998764
No 19
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=2.7e-52 Score=419.23 Aligned_cols=271 Identities=21% Similarity=0.404 Sum_probs=224.4
Q ss_pred ceEEEEEEEEEEEeCCC-CceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCC-CCC
Q 010700 26 LFVYFDFEVSYITASPL-GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNC 103 (503)
Q Consensus 26 ~~~~~~l~i~~~~~~~d-G~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~ 103 (503)
.+++|+|++++..++++ |+++.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++..++++||+|+ +||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 37899999999999885 9999999999999999999999999999999999999999999999998888999998 999
Q ss_pred CCCCCCceEEEEEeCCCceeeEEccCchh--hhh-cCceeeEEEEeCCCCCCCCCCCCCceEEEEeeeeeCCHHHHHHHh
Q 010700 104 PIPPKWNWTYQFQVKDQVGSFFYFPSLHF--QRA-SGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTL 180 (503)
Q Consensus 104 ~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~--q~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~ 180 (503)
+|+||++|+|+|++ +++||||||||... |+. +||+|+|||+++.....+ ...|+|++++|+||+...... ..
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~---~~ 156 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADK---YG 156 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTC---TT
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheecccccc---cC
Confidence 99999999999999 58999999999864 787 999999999987543211 135889999999998742111 00
Q ss_pred hcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccc-ee
Q 010700 181 DAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTV-QQ 259 (503)
Q Consensus 181 ~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~-p~ 259 (503)
..+.....++.++|||+.++. ...+++++|++|||||+|++.. .|.||||||.|+||+.||.+++ |.
T Consensus 157 ~~g~~~~~~~~~~ING~~~~~-----------~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~ 224 (339)
T 2zwn_A 157 EGGTPMNVADYFSVNAKSFPL-----------TQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPY 224 (339)
T ss_dssp CCCSTTSCCCEEEETTBCTTS-----------SCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEE
T ss_pred CCCCCccccceEEEccccCCC-----------cccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCc
Confidence 011122257899999998732 2568999999999999999965 9999999999999999999985 88
Q ss_pred eecEEEEcCCceEEEEEEeCCCCCcceEEEEeeecccc-ccCCCcceEEEEEecCCC
Q 010700 260 NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNE-SQWKRVTGVAILHYTNSK 315 (503)
Q Consensus 260 ~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~-~~~~~~~~~~il~y~~~~ 315 (503)
.+|++.|.||||+||+|+++++ | .|++++....... .........++|+|.+..
T Consensus 225 ~~dtv~l~pg~r~~v~~~~~~p-G-~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 225 YADTVLVSPGERYDVIIEADNP-G-RFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EESEEEECTTCEEEEEEECCSC-S-EEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEEEEECCCCEEEEEEEeCCC-e-eEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 8999999999999999999964 7 7888887654211 001123347899998754
No 20
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=6.7e-52 Score=470.71 Aligned_cols=396 Identities=13% Similarity=0.167 Sum_probs=269.7
Q ss_pred HHHhhhhcCCceEEEEEEEEEEEe--CCCCc--------------------------eeEEE-------EEcCC------
Q 010700 16 LLASLCSAADLFVYFDFEVSYITA--SPLGV--------------------------PQQVI-------AINGK------ 54 (503)
Q Consensus 16 ~~~~~~~~~~~~~~~~l~i~~~~~--~~dG~--------------------------~~~~~-------~~Ng~------ 54 (503)
+++|+..+.+.+|+|.+.|.+..+ +|.|. .+.++ +||+.
T Consensus 10 ~~~~~~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 89 (1065)
T 2j5w_A 10 LFLCSTPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVW 89 (1065)
T ss_dssp ----------CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGG
T ss_pred HHHhccccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccc
Confidence 345557777889999999999985 44332 23333 57777
Q ss_pred --CCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCC----CCCCCCCCCC---CCCCCCCCCceEEEEEeCCC-----
Q 010700 55 --FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQR----RSSWQDGLLG---TNCPIPPKWNWTYQFQVKDQ----- 120 (503)
Q Consensus 55 --~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~----~~~~~DG~~~---~q~~i~PG~~~~y~f~~~~~----- 120 (503)
+|||+||+++||+|+|+|+|+|+++++|||||+++. +.+++||+++ +||+|+||++|+|+|+++++
T Consensus 90 ~~~PGP~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~ 169 (1065)
T 2j5w_A 90 LGFLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGE 169 (1065)
T ss_dssp GTTSCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCT
T ss_pred cCCcCCeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCcc
Confidence 999999999999999999999999999999999886 4567777774 79999999999999999644
Q ss_pred ----ceeeEEccCchh--hhhcCceeeEEEEeCCCCCCCCC-CCCCceEEEEee------eeeCCHHHHHHHh-hcCCCC
Q 010700 121 ----VGSFFYFPSLHF--QRASGGFGGFIINNRAIIPIPFD-TPDGDITILIGD------WYTRNHTALRKTL-DAGKGL 186 (503)
Q Consensus 121 ----~Gt~wyH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~-~~d~e~~l~l~d------~~~~~~~~~~~~~-~~~~~~ 186 (503)
+||||||||.+. |+++||+|+|||+++.....|.+ .+|+|++|+++| |++... +.... +.+...
T Consensus 170 ~d~~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~--~~~~~~~p~~~~ 247 (1065)
T 2j5w_A 170 GDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDN--IKTYCSEPEKVD 247 (1065)
T ss_dssp TSCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHH--HHHHCSCGGGCC
T ss_pred CCCCceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccch--hhhhhcCccccc
Confidence 499999999875 56899999999999875433332 468999999995 444311 11111 111000
Q ss_pred -------CCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCC-CeeeEEEeCCcEEEEEecCCccce
Q 010700 187 -------GMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQ 258 (503)
Q Consensus 187 -------~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~-~~~~~~i~gh~~~via~DG~~~~p 258 (503)
..++.++|||+.+ +..+.+++++|++|||||+|+|.. ..+.|||+||.|+ ++|
T Consensus 248 ~~~~~~~~~~~~~~iNG~~~-----------~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p 308 (1065)
T 2j5w_A 248 KDNEDFQQSNRMYSVNGYTF-----------GSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKN 308 (1065)
T ss_dssp TTCHHHHHHTEEEEETTEET-----------TCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETT
T ss_pred cccccccccCcEEEECCccC-----------CCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECC
Confidence 0135799999985 224789999999999999999975 6899999999999 256
Q ss_pred eeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeeccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCccccccc
Q 010700 259 QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQ 338 (503)
Q Consensus 259 ~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~ 338 (503)
..+|++.|+||||+||+|++++ +| .|+|++....... ....+.+++.+....++.+.+..+. ...+ ..+
T Consensus 309 ~~~dtv~I~pGer~dVlv~~~~-pG-~y~i~~h~~~h~~-----~Gm~~~~~V~~~~~~~~~~~~~g~~---~~~~-~i~ 377 (1065)
T 2j5w_A 309 YRIDTINLFPATLFDAYMVAQN-PG-EWMLSCQNLNHLK-----AGLQAFFQVQECNKSSSKDNIRGKH---VRHY-YIA 377 (1065)
T ss_dssp EEESEEEECBTCEEEEEEECCS-CE-EEEEEECSHHHHH-----TTCEEEEEEECSCCCCCCCCCTTSE---EEEE-EEE
T ss_pred eeecEEEECCCcEEEEEEEeCC-Ce-eEEEEecCcchhh-----CCCEEEEEEecCCCccccccccccc---eeEE-EEe
Confidence 7899999999999999999997 57 8999998764332 2456788887655433333322210 1112 346
Q ss_pred cccccccCCCCCC------CCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhccccccccCcc
Q 010700 339 ARSIRWNVSASGA------RPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAY 412 (503)
Q Consensus 339 ~~~~~~~l~~~~~------~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~~~~~~~~~~ 412 (503)
++.+.|+.++... +++++++. ..++ |.+... ..+++.+-.++ +.|.+ ++|
T Consensus 378 A~e~~wdy~~~~~~~~~~~~~~~~~s~-------~~~~-l~~~~~-~ig~~y~k~v~-~~y~d--------------~~f 433 (1065)
T 2j5w_A 378 AEEIIWNYAPSGIDIFTKENLTAPGSD-------SAVF-FEQGTT-RIGGSYKKLVY-REYTD--------------ASF 433 (1065)
T ss_dssp EEEEEEESCTTSBCTTTCCBTTCTTCT-------THHH-HCCBTT-BCCSEEEEEEE-EEESS--------------TTC
T ss_pred ceecccccCCCCcccccccccCCCccc-------chhh-hccCCc-ccCceEeeeee-ecccC--------------Cce
Confidence 7778888876543 22333221 1111 222111 23445555555 55432 112
Q ss_pred ccCCCCCCCCCCCCcceEEEecCCCcEEEEEEeCCCCCCCceeecCCceEEEeec
Q 010700 413 KLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMD 467 (503)
Q Consensus 413 ~~~~~~~p~~~~~~~~~~~~~~~~g~~vdivi~N~~~~~HP~HLHGh~F~Vl~~g 467 (503)
..+.+..|.......-..++.++.|++|+|+|+|.....|+||+||+.|+|++.|
T Consensus 434 ~~~~~~~~~~~~~g~lgpvi~a~~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~~g 488 (1065)
T 2j5w_A 434 TNRKERGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEG 488 (1065)
T ss_dssp CSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGCS
T ss_pred EEcCcCCcccccccccCceEEEeCCCEEEEEEEECCCCCccCcccceeeeccCCC
Confidence 2111111110011112357888999999999999999999999999999998875
No 21
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=2e-49 Score=396.45 Aligned_cols=263 Identities=20% Similarity=0.260 Sum_probs=222.2
Q ss_pred hcCCceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCC--CCeeEEEccCCCCCCCCCCCC
Q 010700 22 SAADLFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD--ESLLIHWSGIQQRRSSWQDGL 98 (503)
Q Consensus 22 ~~~~~~~~~~l~i~~~~~~~-dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DG~ 98 (503)
.+.+++++|+|++++..+++ ||..+.+|+|||++|||+|++++||+|+|+|+|.++ .++++||||+. .+||+
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~ 107 (327)
T 1kbv_A 33 RDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGG 107 (327)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGG
T ss_pred cCCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCC
Confidence 34567899999999999988 899999999999999999999999999999999986 58999999984 37887
Q ss_pred CCCCCCCCCCCceEEEEEeCCCceeeEEccCc---hhhhhcCceeeEEEEeCCCCCCCCCCCCCceEEEEeeeeeCCHHH
Q 010700 99 LGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL---HFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTA 175 (503)
Q Consensus 99 ~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~ 175 (503)
+. ...|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++.. +.+|+|++++++||+++....
T Consensus 108 ~~-~~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~~----p~~d~e~~l~~~d~~~~~~~~ 181 (327)
T 1kbv_A 108 AA-ATFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGL----PKVDKEFYIVQGDFYTKGKKG 181 (327)
T ss_dssp TT-TTCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTT
T ss_pred Cc-ceeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCCC----CCCceEEEEEeeeeeccCccc
Confidence 64 2359999999999999 589999999996 58999999999999986532 246899999999999875210
Q ss_pred --------HHHHhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEE
Q 010700 176 --------LRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLL 247 (503)
Q Consensus 176 --------~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~ 247 (503)
+.... ...++.++|||+.++.| ..+.+++++|++|||||+|++....+.||++||.|+
T Consensus 182 ~~g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~---------~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~ 247 (327)
T 1kbv_A 182 AQGLQPFDMDKAV-----AEQPEYVVFNGHVGALT---------GDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFD 247 (327)
T ss_dssp CCEEECBCHHHHH-----HTCCSEEEETTSTTTTS---------GGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBS
T ss_pred cccccccChhHhc-----cCCCceEEEcCcccCCC---------CceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEE
Confidence 11000 12468999999998542 126799999999999999999988999999999999
Q ss_pred EEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeeccccccCCCcceEEEEEecCCC
Q 010700 248 LAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK 315 (503)
Q Consensus 248 via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~ 315 (503)
||+.||.+++|..++++.|+||||+||+|++++ +| .|||+++...... .....|+|+|++..
T Consensus 248 vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~-pG-~y~l~~h~~~~~~----~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 248 KVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PG-NYTLVDHSIFRAF----NKGALGQLKVEGAE 309 (327)
T ss_dssp EEEGGGSSCEECSBSEEEECTTEEEEEEEEECS-CE-EEEEEESSTHHHH----HSSCEEEEEEESCC
T ss_pred EEEcCCCcCCCCceeEEEECCCCEEEEEEEeCC-Ce-EEEEEeccccccc----cCCcEEEEEECCCC
Confidence 999999999999999999999999999999996 57 8999998765421 13468999998764
No 22
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=3e-47 Score=373.98 Aligned_cols=235 Identities=19% Similarity=0.265 Sum_probs=204.4
Q ss_pred CceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCC-CC
Q 010700 25 DLFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TN 102 (503)
Q Consensus 25 ~~~~~~~l~i~~~~~~~-dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q 102 (503)
..+++|+|++++..+.+ +|..+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||++ ..++||+|+ +|
T Consensus 32 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~---~~~~DG~p~~~~ 108 (288)
T 3gdc_A 32 RTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVH---RATMDGTPGIGA 108 (288)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCC---CGGGSCCTTSTT
T ss_pred CcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEecccc---ccccCCCCCccc
Confidence 34689999999998776 49999999999999999999999999999999999999999999996 368999998 99
Q ss_pred CCCCCCCceEEEEEeCCCceeeEEccCch---hhhhcCceeeEEEEeCCCCCCCCCCCCCceEEEEeeeeeCCHHHHHHH
Q 010700 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLH---FQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKT 179 (503)
Q Consensus 103 ~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~ 179 (503)
|+|+||++++|+|++ +++||||||||.. .|+.+||+|+|||+++...+ ..|+|++|+++||+.+.
T Consensus 109 ~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~~------- 176 (288)
T 3gdc_A 109 GSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTDG------- 176 (288)
T ss_dssp CSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCSS-------
T ss_pred eeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecCC-------
Confidence 999999999999999 6899999999986 78999999999999976532 34799999999998762
Q ss_pred hhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCC-eeeEEEeCCcEEEEEecCCcc-c
Q 010700 180 LDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIST-SLNFRIQNHNLLLAETEGSYT-V 257 (503)
Q Consensus 180 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~-~~~~~i~gh~~~via~DG~~~-~ 257 (503)
+ ..++.++|||+.+.+ ..+.+++++|++|||||+|++... .|.||||||.|+|++ +|..+ .
T Consensus 177 ---g---~~~~~~~iNG~~~~~----------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~-~g~~~~~ 239 (288)
T 3gdc_A 177 ---G---DDNEFYSVNGLPFHF----------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYP-TGTMLTP 239 (288)
T ss_dssp ---T---TCCSEEEETTSTTHH----------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEE-TTCCSSC
T ss_pred ---C---CCcceEEECcccccc----------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEc-CCCccCC
Confidence 1 136799999998721 124689999999999999999654 799999999999998 55444 5
Q ss_pred eeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeee
Q 010700 258 QQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (503)
Q Consensus 258 p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~ 293 (503)
+...|++.|.||||++|++++++ +| .|.+.++..
T Consensus 240 ~~~~Dtv~v~pg~~~~v~~~~~~-pG-~~~~hCH~~ 273 (288)
T 3gdc_A 240 SEYTDTISQVQGQRGILELRFPY-PG-KFMFHAHKT 273 (288)
T ss_dssp SEEESEEEEETTCEEEEEECCCS-CE-EEEEECSSH
T ss_pred CceeeEEEeCCCceEEEEEECCC-CE-EEEEEecCh
Confidence 78899999999999999999995 57 888888654
No 23
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=1.2e-45 Score=384.95 Aligned_cols=268 Identities=18% Similarity=0.219 Sum_probs=221.1
Q ss_pred hcCCceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCC--CCeeEEEccCCCCCCCCCCCC
Q 010700 22 SAADLFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD--ESLLIHWSGIQQRRSSWQDGL 98 (503)
Q Consensus 22 ~~~~~~~~~~l~i~~~~~~~-dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DG~ 98 (503)
.+.+.+++|+|++++..+.+ ||..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.+ +||.
T Consensus 23 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~ 97 (442)
T 2zoo_A 23 RDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGG 97 (442)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG
T ss_pred cCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCC
Confidence 45567899999999999884 899999999999999999999999999999999986 599999999853 6887
Q ss_pred CCCCCCCCCCCceEEEEEeCCCceeeEEccC---chhhhhcCceeeEEEEeCCCCCCCCCCCCCceEEEEeeeeeCCHHH
Q 010700 99 LGTNCPIPPKWNWTYQFQVKDQVGSFFYFPS---LHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTA 175 (503)
Q Consensus 99 ~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H---~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~ 175 (503)
+.+ .+|+||++++|+|++ +++|||||||| ...|+.+||+|+|||++++.. +.+|+|++|+++||++.....
T Consensus 98 ~~~-~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 98 AES-SFTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGG-CCBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTT
T ss_pred Ccc-EEECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCccc
Confidence 652 369999999999999 68999999997 458999999999999986542 245899999999999875310
Q ss_pred -HHH-Hhh-cCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEec
Q 010700 176 -LRK-TLD-AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETE 252 (503)
Q Consensus 176 -~~~-~~~-~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~D 252 (503)
... .++ .......++.++|||+.+.. ...+.+++++|++|||||+|+|....+.|||+||.|+||+.|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~liNG~~~~~---------~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~D 242 (442)
T 2zoo_A 172 EAGLQPFDMAKAIDEDADYVVFNGSVGST---------TDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVE 242 (442)
T ss_dssp CCEEECBCHHHHHTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGG
T ss_pred ccccccCChhHhccCCCCEEEECCCcCCC---------CCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecC
Confidence 000 000 00011357899999998621 012689999999999999999988899999999999999999
Q ss_pred CCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeeccccccCCCcceEEEEEecCCC
Q 010700 253 GSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK 315 (503)
Q Consensus 253 G~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~ 315 (503)
|.+++|..++++.|.||||+||+|++++ +| .|+++++...... .....++|+|.+..
T Consensus 243 G~~~~p~~~~~~~l~pg~r~~v~v~~~~-~G-~y~~~~~~~~~~~----~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 243 GGSLKNHNVQTTLIPAGGAAIVEFKVEV-PG-TFILVDHSIFRAF----NKGALAMLKVEGPD 299 (442)
T ss_dssp GSSCEECSBSEEEECTTEEEEEEEECCS-CE-EEEEEESSTHHHH----TTSCEEEEEEESCC
T ss_pred CccCCCccceEEEECCCeeEEEEEEcCC-CC-eEEEEeccccccc----ccCceEEEEecCCC
Confidence 9999999999999999999999999996 57 8999997654321 14568999998765
No 24
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=6.2e-45 Score=355.27 Aligned_cols=226 Identities=17% Similarity=0.238 Sum_probs=192.9
Q ss_pred hcCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCC
Q 010700 22 SAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGT 101 (503)
Q Consensus 22 ~~~~~~~~~~l~i~~~~~~~dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~ 101 (503)
.+.+.+|+|+|+|++.. .+.....++++||++|||+||+++||+|+|+|+|+++++++|||||+++.. ++||++.+
T Consensus 2 ~~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~~t 77 (276)
T 3kw8_A 2 PAGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTAMN 77 (276)
T ss_dssp --CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCTTT
T ss_pred CCcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCcCC
Confidence 45678999999999843 344555677899999999999999999999999999999999999998864 69999988
Q ss_pred CCCCCCCCceEEEEEeCC------------CceeeEEccCch------hhhhcCceeeEEEEeCCCCCCCCCCCCCceEE
Q 010700 102 NCPIPPKWNWTYQFQVKD------------QVGSFFYFPSLH------FQRASGGFGGFIINNRAIIPIPFDTPDGDITI 163 (503)
Q Consensus 102 q~~i~PG~~~~y~f~~~~------------~~Gt~wyH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l 163 (503)
||+|+||++|+|+|++++ ++||||||||.. .|+.+||+|+|||+++... ..|+|++|
T Consensus 78 ~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~drE~~l 152 (276)
T 3kw8_A 78 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTI 152 (276)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEE
T ss_pred cCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc-----ccccceEE
Confidence 999999999999999953 379999999973 6899999999999998652 23899999
Q ss_pred EEeeeeeCCHHHHHHHhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeC
Q 010700 164 LIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQN 243 (503)
Q Consensus 164 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~g 243 (503)
++++| +|||+.+. ..+.++++.|++|||||+|.+.. .|+||+||
T Consensus 153 ~l~~~------------------------~iNG~~~~-----------~~p~i~v~~G~~vri~l~N~~~~-~Hp~HlHG 196 (276)
T 3kw8_A 153 VFNDM------------------------TINNRKPH-----------TGPDFEATVGDRVEIVMITHGEY-YHTFHMHG 196 (276)
T ss_dssp EEETT------------------------EETTCCTT-----------CCCCEEEETTCEEEEEEEEESSC-CEEEEETT
T ss_pred Eeccc------------------------ccceeccc-----------CCCCEEEecCCEEEEEEecCCCc-ceeEEEcc
Confidence 88653 89999862 35899999999999999999985 99999999
Q ss_pred CcEEEEEecCCcc----ceeeecEEEEcCCceEEEEEEeCC--CCCcceEEEEeeec
Q 010700 244 HNLLLAETEGSYT----VQQNYTSLDIHVGQSYSFLVTMDQ--NASTDYYIVASARF 294 (503)
Q Consensus 244 h~~~via~DG~~~----~p~~~d~v~l~pGeR~dvlv~~~~--~~g~~y~i~~~~~~ 294 (503)
|.|.+++ ||... .+..+|++.|.|||++++++++++ .+| .|+++++...
T Consensus 197 ~~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG-~w~~HCH~~~ 251 (276)
T 3kw8_A 197 HRWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCHVQS 251 (276)
T ss_dssp CCEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHH
T ss_pred ceeEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCC-eEEEECCCch
Confidence 9999875 66543 246789999999999999999985 467 8999998653
No 25
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=2.2e-44 Score=361.45 Aligned_cols=269 Identities=16% Similarity=0.149 Sum_probs=208.3
Q ss_pred hhcCCceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCC
Q 010700 21 CSAADLFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL 99 (503)
Q Consensus 21 ~~~~~~~~~~~l~i~~~~~~~-dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~ 99 (503)
+.+.+.+++|+|++++..+++ +|+.+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++......||.+
T Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~ 102 (333)
T 1mzy_A 26 AASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGG 102 (333)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGG
T ss_pred cCCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCC
Confidence 455667899999999999887 5999999999999999999999999999999999 578999999887544455544
Q ss_pred C-CCCCCCCCCceEEEEEeCCCceeeEEccCch-----hhhhcCceeeEEEEeCCCCC----CCCCCCCCceEEEEeeee
Q 010700 100 G-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH-----FQRASGGFGGFIINNRAIIP----IPFDTPDGDITILIGDWY 169 (503)
Q Consensus 100 ~-~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~-----~q~~~Gl~G~liV~~~~~~~----~~~~~~d~e~~l~l~d~~ 169 (503)
. + .|+||++++|+|++ +++||||||||.. .|+.+||+|+|||+++...+ .+. .+|+|++|+++||+
T Consensus 103 ~~~--~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~ 178 (333)
T 1mzy_A 103 GLT--LINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHY 178 (333)
T ss_dssp GGC--CBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEEC
T ss_pred cee--EeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeec
Confidence 4 4 49999999999999 5899999999986 69999999999999865422 122 55899999999999
Q ss_pred eCC--HHHH----------HHHhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCee
Q 010700 170 TRN--HTAL----------RKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSL 237 (503)
Q Consensus 170 ~~~--~~~~----------~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~ 237 (503)
+.. ...+ ...++.. ....++.++|||+.... ...+.+++++|++||||++|++ +.+
T Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ING~~~~~---------~~~~~l~v~~Ger~Rl~n~~~~--~~~ 246 (333)
T 1mzy_A 179 IPKDEDGTYMRFSDPSEGYEDMVAVM-DTLIPSHIVFNGAVGAL---------TGEGALKAKVGDNVLFVHSQPN--RDS 246 (333)
T ss_dssp CCBCTTSCBCCCSSHHHHHHHHHHHH-TTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEESS--SCB
T ss_pred cCccccccccccccccccccchhHHh-hccCCcEEEECCccccc---------CCCcceEecCCCEEEEEECCCC--Ccc
Confidence 831 1111 0000000 12457899999998521 1136799999998887766654 344
Q ss_pred eEE-EeCCcEEEEEecCCccce-e-eecEEEEcCCceEEEEEEeCCCCCcceEEEEeeeccccccCCCcceEEEEEecCC
Q 010700 238 NFR-IQNHNLLLAETEGSYTVQ-Q-NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNS 314 (503)
Q Consensus 238 ~~~-i~gh~~~via~DG~~~~p-~-~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~ 314 (503)
.+| +++|.|+|++ ||.++++ . .+|++.|.||||+||+|++++ +| +|++.++...... .....++++|.+.
T Consensus 247 ~~h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG-~y~~~ch~~~h~~----~~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 247 RPHLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PG-VYAYVNHNLIEAV----HKGATAHVLVEGE 319 (333)
T ss_dssp CEEEETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHH----TTCCEEEEEEESC
T ss_pred ccEEECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CE-EEEEecChhhhHh----hCCCEEEEEEcCC
Confidence 333 7889999999 9999864 3 589999999999999999997 47 8999988754320 1345689999865
Q ss_pred C
Q 010700 315 K 315 (503)
Q Consensus 315 ~ 315 (503)
.
T Consensus 320 ~ 320 (333)
T 1mzy_A 320 W 320 (333)
T ss_dssp C
T ss_pred C
Confidence 4
No 26
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=1.4e-44 Score=363.52 Aligned_cols=268 Identities=19% Similarity=0.203 Sum_probs=204.4
Q ss_pred hcCCceEEEEEEEEEEEeC--CCCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCC
Q 010700 22 SAADLFVYFDFEVSYITAS--PLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL 99 (503)
Q Consensus 22 ~~~~~~~~~~l~i~~~~~~--~dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~ 99 (503)
.+.+++++|+|++++..+. +||..+.+|+|||++|||+|+|++||+|+|+|+|.+. ++||||+++.+..+.||.+
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~ 103 (336)
T 1oe1_A 27 KSGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGA 103 (336)
T ss_dssp CCCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCc
Confidence 3456789999999999864 6799999999999999999999999999999999974 3445555444434566655
Q ss_pred C-CCCCCCCCCceEEEEEeCCCceeeEEccCch----hhhhcCceeeEEEEeCCCCC----CCCCCCCCceEEEEeeeee
Q 010700 100 G-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASGGFGGFIINNRAIIP----IPFDTPDGDITILIGDWYT 170 (503)
Q Consensus 100 ~-~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~d~e~~l~l~d~~~ 170 (503)
. ++ |+||++++|+|++ +++||||||||.. .|+.+||+|+|||+++...+ .+. .+|+|++|+++||++
T Consensus 104 ~~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~-~~D~e~~l~~~D~~~ 179 (336)
T 1oe1_A 104 KLTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPL-HYDRAYTIGEFDLYI 179 (336)
T ss_dssp GGCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECC
T ss_pred ceEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcc-cCCceeEeeeeeeee
Confidence 4 54 9999999999999 5899999999974 69999999999999875422 122 568999999999998
Q ss_pred CCH--HHHH----------HHhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeee
Q 010700 171 RNH--TALR----------KTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLN 238 (503)
Q Consensus 171 ~~~--~~~~----------~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~ 238 (503)
..+ ..+. ..++. .....++.++|||+.+..| ..+.+++++|++||| +|++..+.+.
T Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~---------~~~~l~v~~GervRl--in~~~~~~~~ 247 (336)
T 1oe1_A 180 PKGPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALT---------GANALTAKVGETVLL--IHSQANRDTR 247 (336)
T ss_dssp CBCTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTS---------GGGCEEEETTCEEEE--EEEESSSCBC
T ss_pred ccccCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCC---------CCcceEcCCCCEEEE--EecCCCCccc
Confidence 421 1110 00000 0023578999999987432 128899999997765 6776666666
Q ss_pred EE-EeCCcEEEEEecCCcccee--eecEEEEcCCceEEEEEEeCCCCCcceEEEEeeeccccccCCCcceEEEEEecCCC
Q 010700 239 FR-IQNHNLLLAETEGSYTVQQ--NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK 315 (503)
Q Consensus 239 ~~-i~gh~~~via~DG~~~~p~--~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~ 315 (503)
++ ++||.|+|++ ||.+++|. .++++.|+||||+||+|++++ +| .|+++++...... .....|+++|.+..
T Consensus 248 ~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG-~y~~~~h~~~~~~----~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 248 PHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PG-VYAYLNHNLIEAF----ELGAAGHIKVEGKW 320 (336)
T ss_dssp EEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHH----TTSCEEEEEEESCC
T ss_pred eEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-Cc-eEEEEechhhccc----cCCCeEEEEECCCC
Confidence 55 5999999997 99998754 468999999999999999997 57 8999987653221 13457899998654
No 27
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=7.4e-44 Score=353.74 Aligned_cols=228 Identities=17% Similarity=0.207 Sum_probs=191.7
Q ss_pred hhhcCCceEEEEEEEEEEEeCCCCce-eEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCC
Q 010700 20 LCSAADLFVYFDFEVSYITASPLGVP-QQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGL 98 (503)
Q Consensus 20 ~~~~~~~~~~~~l~i~~~~~~~dG~~-~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~ 98 (503)
.+.+.+.+|+++|.+. ..++|.. ..++..||++|||+|||++||+|+|+|+|++++++||||||+++. +.+||+
T Consensus 6 ~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~ 80 (313)
T 3tas_A 6 TAPAGGEVKRIKLYAE---RLGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYE--ISSDGT 80 (313)
T ss_dssp BCCCCCCEEEEEEEEE---ECGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCS
T ss_pred cCCCCceEEEEEEEEE---EcCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCC--ccCCCC
Confidence 3556667899998765 3567754 445677999999999999999999999999999999999999775 579999
Q ss_pred CCCCCCCCCCCceEEEEEeC------------CCceeeEEccCch------hhhhcCceeeEEEEeCCCCCCCCCCCCCc
Q 010700 99 LGTNCPIPPKWNWTYQFQVK------------DQVGSFFYFPSLH------FQRASGGFGGFIINNRAIIPIPFDTPDGD 160 (503)
Q Consensus 99 ~~~q~~i~PG~~~~y~f~~~------------~~~Gt~wyH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~d~e 160 (503)
+.+||+|+||++|+|+|++. +++||||||||.. .|+.+||+|+|||+++... .+|+|
T Consensus 81 ~~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e 155 (313)
T 3tas_A 81 KQSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRT 155 (313)
T ss_dssp TTTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEE
T ss_pred ccccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----ccccc
Confidence 98999999999999999863 3579999999964 4578999999999997652 34899
Q ss_pred eEEEEeeeeeCCHHHHHHHhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEE
Q 010700 161 ITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFR 240 (503)
Q Consensus 161 ~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~ 240 (503)
++|+++||+ +||+... ..+.+.++.|++|||||+|++.. .++||
T Consensus 156 ~~l~~~d~t------------------------~Ng~~~~-----------~~~~l~v~~Ge~vr~~liN~g~~-~hpfH 199 (313)
T 3tas_A 156 HTIVFNDMT------------------------INNRPAH-----------TGPDFEATVGDRVEFVMITHGEY-YHTFH 199 (313)
T ss_dssp EEEEEETTE------------------------ETTCCTT-----------CCCCEEEETTCEEEEEEEEESSC-CEEEE
T ss_pred ceeeccchh------------------------cccCCcc-----------cccccccccCCEEEEEEeccccc-ceeee
Confidence 999999873 5666552 23789999999999999999965 89999
Q ss_pred EeCCcEEEEEecCCcc---ceeeecEEEEcCCceEEEEEEeCCC--CCcceEEEEeeec
Q 010700 241 IQNHNLLLAETEGSYT---VQQNYTSLDIHVGQSYSFLVTMDQN--ASTDYYIVASARF 294 (503)
Q Consensus 241 i~gh~~~via~DG~~~---~p~~~d~v~l~pGeR~dvlv~~~~~--~g~~y~i~~~~~~ 294 (503)
||||.|+|++.||... .+..+|++.|.||||++++|.+.+. +| .|.+.++...
T Consensus 200 lHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG-~w~~HCHi~~ 257 (313)
T 3tas_A 200 LHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAG-AWMYHCHVQS 257 (313)
T ss_dssp ETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHH
T ss_pred ecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCE-eEEEEeCChH
Confidence 9999999999998765 3678999999999999999988643 57 7888887653
No 28
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=2.9e-44 Score=361.86 Aligned_cols=270 Identities=17% Similarity=0.160 Sum_probs=204.8
Q ss_pred hhcCCceEEEEEEEEEEEeC--CCCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCC
Q 010700 21 CSAADLFVYFDFEVSYITAS--PLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGL 98 (503)
Q Consensus 21 ~~~~~~~~~~~l~i~~~~~~--~dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~ 98 (503)
..+.+.+++|+|++++..+. +||..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+....||.
T Consensus 32 ~~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~ 108 (340)
T 2bw4_A 32 AKTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGG 108 (340)
T ss_dssp CSSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGG
T ss_pred ccCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCC
Confidence 45567889999999999876 569999999999999999999999999999999998 6789999887654334443
Q ss_pred CC-CCCCCCCCCceEEEEEeCCCceeeEEccCch----hhhhcCceeeEEEEeCCCCC----CCCCCCCCceEEEEeeee
Q 010700 99 LG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASGGFGGFIINNRAIIP----IPFDTPDGDITILIGDWY 169 (503)
Q Consensus 99 ~~-~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~d~e~~l~l~d~~ 169 (503)
.. + .|.||++++|+|++. ++||||||||.. .|+.+||+|+|||++++... .+. .+|+|++|+++||+
T Consensus 109 ~~~~--~i~PG~~~~y~~~~~-~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~ 184 (340)
T 2bw4_A 109 GALT--QVNPGEETTLRFKAT-KPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFY 184 (340)
T ss_dssp GGGC--CBCTTEEEEEEEECC-SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEEC
T ss_pred ccce--EeCCCCEEEEEEECC-CCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeee
Confidence 33 4 499999999999994 799999999975 69999999999999875311 122 46899999999999
Q ss_pred eC--CHHHH----------HHHhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCee
Q 010700 170 TR--NHTAL----------RKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSL 237 (503)
Q Consensus 170 ~~--~~~~~----------~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~ 237 (503)
+. ....+ ....+. .....++.++|||+.+.. ...+.+++++|+++||+++|.+.. .+
T Consensus 185 ~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~---------~~~~~l~v~~G~r~Rl~n~~~~~~-~~ 253 (340)
T 2bw4_A 185 VPKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGAL---------TGDHALTAAVGERVLVVHSQANRD-TR 253 (340)
T ss_dssp CCBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEESSSC-BC
T ss_pred eccccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCc---------cCCCceEcCCCCEEEEEECCCCCc-cc
Confidence 83 21111 000000 002357899999998621 113889999999887666654432 33
Q ss_pred eEEEeCCcEEEEEecCCccce--eeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeeccccccCCCcceEEEEEecCCC
Q 010700 238 NFRIQNHNLLLAETEGSYTVQ--QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK 315 (503)
Q Consensus 238 ~~~i~gh~~~via~DG~~~~p--~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~ 315 (503)
..++++|.|+|++ ||.++.+ ..+|++.|.||||+||+|++++ +| .|+++++...... .....++++|.+..
T Consensus 254 ~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG-~y~~~~h~~~~h~----~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 254 PHLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PG-VYAYVNHNLIEAF----ELGAAGHFKVTGEW 326 (340)
T ss_dssp EEEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHH----TTSCEEEEEEESCC
T ss_pred eEEecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-Ce-eeEEEcCchHHHH----hCCCEEEEEECCCC
Confidence 3448899999997 9998764 3589999999999999999997 57 8999997752111 12346889998654
No 29
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=9.3e-44 Score=350.31 Aligned_cols=228 Identities=17% Similarity=0.237 Sum_probs=188.5
Q ss_pred hhhcCCceEEEEEEEEEEEeCCCC-ceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCC
Q 010700 20 LCSAADLFVYFDFEVSYITASPLG-VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGL 98 (503)
Q Consensus 20 ~~~~~~~~~~~~l~i~~~~~~~dG-~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~ 98 (503)
...+.+.+|+++|.+++.. +| ..+.++.+||++|||+|||++||+|+|+|+|++++++||||||+++. +++||+
T Consensus 22 p~~~~~~~~~~~~~a~~~~---~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG~ 96 (299)
T 3t9w_A 22 PVRAQGTTRRITMYAEKIS---DELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDGT 96 (299)
T ss_dssp -----CCEEEEEEEEEEEE---TTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCC
T ss_pred CcccCCCEEEEEEEEEecC---CCceeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCCC
Confidence 4566778999999988755 33 22345566999999999999999999999999999999999999764 679999
Q ss_pred CCCCCCCCCCCceEEEEEeC------------CCceeeEEccCch------hhhhcCceeeEEEEeCCCCCCCCCCCCCc
Q 010700 99 LGTNCPIPPKWNWTYQFQVK------------DQVGSFFYFPSLH------FQRASGGFGGFIINNRAIIPIPFDTPDGD 160 (503)
Q Consensus 99 ~~~q~~i~PG~~~~y~f~~~------------~~~Gt~wyH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~d~e 160 (503)
+.+||+|+||++|+|+|+++ +++||||||||.. .|+++||+|+|||+++... .+|+|
T Consensus 97 ~~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e 171 (299)
T 3t9w_A 97 LMNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQ 171 (299)
T ss_dssp TTTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEE
T ss_pred ccccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Ccccc
Confidence 88999999999999999985 2579999999963 4789999999999987642 34899
Q ss_pred eEEEEeeeeeCCHHHHHHHhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEE
Q 010700 161 ITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFR 240 (503)
Q Consensus 161 ~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~ 240 (503)
++|++++| .+||+... +.+.++++.|++|||||+|++.. .++||
T Consensus 172 ~~l~~~~~------------------------~~Ng~~~~-----------~~p~l~v~~Ge~Vr~~liN~~~~-~HpfH 215 (299)
T 3t9w_A 172 FTVVFNDM------------------------MINNRAHH-----------DAPTFEANLGERVEWIAIGHGSN-FHTFH 215 (299)
T ss_dssp EEEEEETT------------------------EETTCCTT-----------CCCEEEEETTCEEEEEEEEESSC-CCEEE
T ss_pred ceeeeeee------------------------eecCcccc-----------ccccceecCCCEEEEEEEecccc-ceeee
Confidence 99998765 37787763 34889999999999999999975 79999
Q ss_pred EeCCcEEEEEecCCccc---eeeecEEEEcCCceEEEEEEeCCC--CCcceEEEEeeec
Q 010700 241 IQNHNLLLAETEGSYTV---QQNYTSLDIHVGQSYSFLVTMDQN--ASTDYYIVASARF 294 (503)
Q Consensus 241 i~gh~~~via~DG~~~~---p~~~d~v~l~pGeR~dvlv~~~~~--~g~~y~i~~~~~~ 294 (503)
|+||.|+++..++.... +..+|++.|.||||++++|.+.+. +| .|.+.+....
T Consensus 216 lHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG-~w~~HCHi~~ 273 (299)
T 3t9w_A 216 LHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPG-MWMYHCHVQN 273 (299)
T ss_dssp ETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSE-EEEEEECSHH
T ss_pred EecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCe-eEEEEcCCHH
Confidence 99999999988887653 356899999999999999987543 57 8888887653
No 30
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=1.2e-40 Score=334.06 Aligned_cols=238 Identities=17% Similarity=0.233 Sum_probs=192.4
Q ss_pred CCceEEEEEEEEEEEeCCCCceeE-EEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCC
Q 010700 24 ADLFVYFDFEVSYITASPLGVPQQ-VIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102 (503)
Q Consensus 24 ~~~~~~~~l~i~~~~~~~dG~~~~-~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q 102 (503)
.+.+++|+|++++. ++|.... .+.+||++|||+|+|++||+|+|+|+|.++++++|||||+++. .++||++.+|
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~ 119 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNK 119 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCccccc
Confidence 34679999999874 4554322 2234899999999999999999999999999999999999876 6799999889
Q ss_pred CCCCCCCceEEEEEeCC------------CceeeEEccCc------hhhhhcCceeeEEEEeCCCCCCCCCCCCCceEEE
Q 010700 103 CPIPPKWNWTYQFQVKD------------QVGSFFYFPSL------HFQRASGGFGGFIINNRAIIPIPFDTPDGDITIL 164 (503)
Q Consensus 103 ~~i~PG~~~~y~f~~~~------------~~Gt~wyH~H~------~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~ 164 (503)
|+|+||++|+|+|++.+ ++|+||||||. ..|+.+||+|+|||+++... ..|+|++|+
T Consensus 120 ~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e~~l~ 194 (343)
T 3cg8_A 120 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIV 194 (343)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEE
T ss_pred ccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCceEEEE
Confidence 99999999999999842 35999999996 37899999999999987642 247899998
Q ss_pred EeeeeeCCHHHHHHHhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCC
Q 010700 165 IGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNH 244 (503)
Q Consensus 165 l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh 244 (503)
++|| +|||+.++ ..+.++++.|++|||||+|.+.. .|.||||||
T Consensus 195 ~~d~------------------------~iNG~~~~-----------~~~~l~v~~Ge~vri~l~N~g~~-~HpfHlHGh 238 (343)
T 3cg8_A 195 FNDM------------------------TINNRKPH-----------TGPDFEATVGDRVEIVMITHGEY-YHTFHMHGH 238 (343)
T ss_dssp EETT------------------------EETTCCTT-----------CCCCEEEETTCEEEEEEEEESSC-CEEEEETTC
T ss_pred cccc------------------------eecccCCC-----------CCccEEeCCCCEEEEEEEcCCcc-ccccEecCc
Confidence 8764 78999762 23789999999999999999974 999999999
Q ss_pred cEEEEEecCCccc----eeeecEEEEcCCceEEEEEEeC--CCCCcceEEEEeeeccccccCCCcceEEEEEecCC
Q 010700 245 NLLLAETEGSYTV----QQNYTSLDIHVGQSYSFLVTMD--QNASTDYYIVASARFVNESQWKRVTGVAILHYTNS 314 (503)
Q Consensus 245 ~~~via~DG~~~~----p~~~d~v~l~pGeR~dvlv~~~--~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~ 314 (503)
.|+|++ +|.+.. +...|++.|.|||+++++++++ +.+| .|++.++...... ....+.+++...
T Consensus 239 ~f~v~~-~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG-~w~~HCHi~~H~~-----~GM~g~~~V~~~ 307 (343)
T 3cg8_A 239 RWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKKP 307 (343)
T ss_dssp CEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred EEEEec-cCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCe-eEEEeCCCHHHHh-----ccCcEEEEEecC
Confidence 999874 665432 3567999999999999999984 2457 8888887653222 234566677543
No 31
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=2.6e-40 Score=359.84 Aligned_cols=248 Identities=15% Similarity=0.188 Sum_probs=184.3
Q ss_pred CCceEEEEEEEEEEEe--CCCC------------ceeE--EEEE----------------cCCCCCceEEEecCCEEEEE
Q 010700 24 ADLFVYFDFEVSYITA--SPLG------------VPQQ--VIAI----------------NGKFPGPTINVTTNNNVVVN 71 (503)
Q Consensus 24 ~~~~~~~~l~i~~~~~--~~dG------------~~~~--~~~~----------------Ng~~pgP~i~~~~Gd~v~v~ 71 (503)
.+.+|+|-+-+.+..+ +|.| +... ...| ++++|||+|+|++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 4678999999999985 4322 1111 2233 34789999999999999999
Q ss_pred EEeCCCCCeeEEEccCCCCCCCCCCCCCC-C--------CCCCCCCCceEEEEEeCCC-----ce----eeEEccCch--
Q 010700 72 VRNKLDESLLIHWSGIQQRRSSWQDGLLG-T--------NCPIPPKWNWTYQFQVKDQ-----VG----SFFYFPSLH-- 131 (503)
Q Consensus 72 v~N~l~~~~siH~HG~~~~~~~~~DG~~~-~--------q~~i~PG~~~~y~f~~~~~-----~G----t~wyH~H~~-- 131 (503)
|+|.++++++|||||+++. +++||+++ + ||+|+||++|+|+|+++++ +| |||||||.+
T Consensus 83 ~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 9999999999999999875 57999996 5 8999999999999999754 57 999999985
Q ss_pred hhhhcCceeeEEEEeCCCCCC--CCCCCCCceEEEEe------eeeeCCHHHHHH-HhhcCCCCCCCCeEEECCcCCCCC
Q 010700 132 FQRASGGFGGFIINNRAIIPI--PFDTPDGDITILIG------DWYTRNHTALRK-TLDAGKGLGMPDGVLINGKGPYQY 202 (503)
Q Consensus 132 ~q~~~Gl~G~liV~~~~~~~~--~~~~~d~e~~l~l~------d~~~~~~~~~~~-~~~~~~~~~~~~~~liNG~~~~~~ 202 (503)
.|+.+||+|+|||+++..... ..+..++|++|+|+ ||+++....... ..+ ......++.++|||+.+.
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~iNG~~~~-- 237 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRAS-SEVKNSHEFHAINGMIYN-- 237 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC----------------CCCEEEEETTBSSC--
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCC-cchhhcCceeccCCEecC--
Confidence 799999999999999764321 11234689999999 677664322100 011 011234689999999851
Q ss_pred CCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCC-eeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCC
Q 010700 203 NTTLVPDGIDYETIEVHPGKTYRIRVHNVGIST-SLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQN 281 (503)
Q Consensus 203 ~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~-~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~ 281 (503)
.|.+++++|++|||||+|++... .|.||+|||.|+|++.||. .+|++.|.||||+||+|+++++
T Consensus 238 ----------~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~~-----~~d~v~l~pg~r~~v~~~~~~p 302 (647)
T 1sdd_B 238 ----------LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQH-----QLGVWPLLPGSFKTLEMKASKP 302 (647)
T ss_dssp ----------CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSCE-----EESSEEECTTEEEEEEEECCSS
T ss_pred ----------CCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCCc-----ccceEEECCCeEEEEEEEeccc
Confidence 37899999999999999999864 8999999999999998864 5899999999999999999974
Q ss_pred CCcceEEEEeee
Q 010700 282 ASTDYYIVASAR 293 (503)
Q Consensus 282 ~g~~y~i~~~~~ 293 (503)
| .|.++++..
T Consensus 303 -G-~w~~hch~~ 312 (647)
T 1sdd_B 303 -G-WWLLDTEVG 312 (647)
T ss_dssp -E-EEEEECCCH
T ss_pred -e-EeecccCcc
Confidence 7 788887764
No 32
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=2.3e-39 Score=338.36 Aligned_cols=259 Identities=19% Similarity=0.210 Sum_probs=211.5
Q ss_pred CceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCC--CCeeEEEccCCCCCCCCCCCCCCC
Q 010700 25 DLFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD--ESLLIHWSGIQQRRSSWQDGLLGT 101 (503)
Q Consensus 25 ~~~~~~~l~i~~~~~~~-dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DG~~~~ 101 (503)
+.++.++|++++....+ +|....+|+|||++|||+|++++||+++|||+|.++ ..++|||||+. .+||++.+
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCcc
Confidence 45678889888777666 698999999999999999999999999999999985 57999999984 37998751
Q ss_pred CCCCCCCCceEEEEEeCCCceeeEEccCch---hhhhcCceeeEEEEeCCCCCCCCCCCCCceEEEEeeeeeCCHH----
Q 010700 102 NCPIPPKWNWTYQFQVKDQVGSFFYFPSLH---FQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHT---- 174 (503)
Q Consensus 102 q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~---- 174 (503)
..|.|||+++|.|++ +++|+||||||.. .|+.+||+|+|+|+++... +.+|+|++++++||++....
T Consensus 236 -~~i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~~----P~~d~~~~~~~~~~~~~~~~~~~g 309 (447)
T 2dv6_A 236 -TQTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGL----PQVDREFYVMQGEIYTVKSFGTSG 309 (447)
T ss_dssp -CCBCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTCS----CCCSEEEEEEEEEECBSSCTTCCE
T ss_pred -EEeCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCCC----CCCCeeEEEEecccccCCcccccc
Confidence 239999999999999 5799999999964 7889999999999986532 24588999999999875320
Q ss_pred ----HHHHHhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEE
Q 010700 175 ----ALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAE 250 (503)
Q Consensus 175 ----~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via 250 (503)
.+.... ...++.++|||+.+..+ ..+.+++++|++|||||+|++....|.||||||.|+||+
T Consensus 310 ~~~~~~~~~~-----~~~~~~~~iNG~~~~~~---------~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~ 375 (447)
T 2dv6_A 310 EQEMDYEKLI-----NEKPEYFLFNGSVGSLT---------RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVY 375 (447)
T ss_dssp ECCBBHHHHH-----TTCCSEEEETTSTTCCC---------CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEEC
T ss_pred cccCChHHhh-----ccCCCEEEECCcccCCC---------CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEE
Confidence 011111 12468999999987432 125799999999999999999888999999999999999
Q ss_pred ecCCcccee--eecEEEEcCCceEEEEEEeCCCCCcceEEEEeeeccccccCCCcceEEEEEecCCC
Q 010700 251 TEGSYTVQQ--NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK 315 (503)
Q Consensus 251 ~DG~~~~p~--~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~ 315 (503)
.||.++++. .+|++.|.||||++|+|++++ +| .|+|+++...... ....++++|.+..
T Consensus 376 ~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~~-pG-~~~~hch~~~h~~-----~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 376 SLGSVVSPPLIGVQTVSVPPGGATIVDFKIDR-AG-RYILVDHALSRLE-----HGLVGFLNVDGPK 435 (447)
T ss_dssp GGGCSSSCCEEEESEEEECTTEEEEEEEECCS-CE-EEEEEESSGGGGG-----GTCCEEEEECSCS
T ss_pred cCCcccCCCcccccEEEECCCcEEEEEEECCC-CE-EEEEEecCcCccc-----cCCEEEEEEeCCC
Confidence 999998654 589999999999999999996 57 8999998765432 3447899997654
No 33
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=4.2e-42 Score=340.27 Aligned_cols=212 Identities=13% Similarity=0.194 Sum_probs=158.6
Q ss_pred EEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCC-C--------CCCCCCCCceEEEEEe
Q 010700 47 QVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-T--------NCPIPPKWNWTYQFQV 117 (503)
Q Consensus 47 ~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~-~--------q~~i~PG~~~~y~f~~ 117 (503)
...++| ++|||+|+|++||+|+|+|+|.++++++|||||++.. +.+||++. + ||+|+||++|+|+|++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~--~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYS--KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCC--TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecc--cccCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 345678 6899999999999999999999999999999999843 34666553 2 7999999999999999
Q ss_pred CCC---------ceeeEEccCchh--hhhcCceeeEEEEeCCCC---CCCCCCCCCceEEEEeeeeeCCHHHHHHHhhcC
Q 010700 118 KDQ---------VGSFFYFPSLHF--QRASGGFGGFIINNRAII---PIPFDTPDGDITILIGDWYTRNHTALRKTLDAG 183 (503)
Q Consensus 118 ~~~---------~Gt~wyH~H~~~--q~~~Gl~G~liV~~~~~~---~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~ 183 (503)
+++ +||||||||... |+.+||+|+|||+++... +.+ ...|+|++|+++||..... .
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~-~~~d~e~~l~~~d~d~~~~--------~- 196 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQ-KMFEKQHVLMFAVFDESKS--------W- 196 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSB-SSSCCCCCCBCCEEETTSS--------S-
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCc-CcccceEEEEEEecccccc--------c-
Confidence 643 379999999775 889999999999987431 112 2458999999999853211 0
Q ss_pred CCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCC-CeeeEEEeCCcEEEEEecCCccceeeec
Q 010700 184 KGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYT 262 (503)
Q Consensus 184 ~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~-~~~~~~i~gh~~~via~DG~~~~p~~~d 262 (503)
....++.++|||+.+ +..|.+++++|++|||||+|++.. ..|.||+|||.|.+ ||. .+|
T Consensus 197 -~~~~~~~~~ING~~~-----------~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG~-----~~d 256 (306)
T 1sdd_A 197 -NQTSSLMYTVNGYVN-----------GTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NHH-----KIS 256 (306)
T ss_dssp -SCCCCEEECSSSCCS-----------SCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TTE-----ECS
T ss_pred -ccCCCcceeeCCEec-----------CCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CCE-----Ecc
Confidence 012357899999986 224789999999999999999986 57899999999985 873 489
Q ss_pred EEEEcCCceEEEEEEeCCCCCcceEEEEeee
Q 010700 263 SLDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (503)
Q Consensus 263 ~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~ 293 (503)
++.|.||||+|++|++++ +| .|+++++..
T Consensus 257 tv~l~pger~~v~~~~~~-pG-~~~~hch~~ 285 (306)
T 1sdd_A 257 AITLVSATSTTANMTVSP-EG-RWTIASLIP 285 (306)
T ss_dssp CCCEETTCCBC---------C-CCCCBCCST
T ss_pred eEEECCCcEEEEEEEcCC-Ce-EEEEEeCCh
Confidence 999999999999999986 47 788887754
No 34
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=4.9e-40 Score=343.41 Aligned_cols=359 Identities=13% Similarity=0.058 Sum_probs=234.4
Q ss_pred cCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCC
Q 010700 23 AADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102 (503)
Q Consensus 23 ~~~~~~~~~l~i~~~~~~~dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q 102 (503)
+.+.++++++++++..+..+| .+++|||++ +|+|+|++||+|+|+|+|.+...+++||||... .++
T Consensus 24 ~~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~----------~~~ 89 (447)
T 2dv6_A 24 HAPVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA----------RSA 89 (447)
T ss_dssp CCCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE----------ECC
T ss_pred CCCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc----------ccc
Confidence 444567777776665555554 456999999 899999999999999999998889999999632 157
Q ss_pred CCCCCCCceEEEEEeCCCceeeEEccCchhhhhcCceeeEEEEeCCCCCCC------------CCC-----CCCceEEEE
Q 010700 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIP------------FDT-----PDGDITILI 165 (503)
Q Consensus 103 ~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~~------------~~~-----~d~e~~l~l 165 (503)
|+|+||++++|.|++. ++||||||||...|+.+||.|.|+|+++...... .+. .+..+.+.+
T Consensus 90 ~~i~pG~~~~~~f~~~-~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~l 168 (447)
T 2dv6_A 90 IVNGKNASSTFSFVAS-KVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPIGPRQAKTVRIDL 168 (447)
T ss_dssp CBCSTTBEEEEEEECC-SCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCCCSCCCCEEEEEE
T ss_pred eecCCCCeEEEEEEcC-CCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCccccCCCcEEEEEE
Confidence 9999999999999995 6999999999999999999999999987542210 000 000111111
Q ss_pred eeeeeCCHHHHHHHhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCC-CCeeeEEEeCC
Q 010700 166 GDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGI-STSLNFRIQNH 244 (503)
Q Consensus 166 ~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~-~~~~~~~i~gh 244 (503)
..-... ..... ....+.+++||+.. .|++++++|++|||||+|.+. ...+.+|+||.
T Consensus 169 ~~~~~~------~~~~~---g~~~~~~~~NG~~p-------------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~ 226 (447)
T 2dv6_A 169 ETVEVK------GQLDD---NTTYTYWTFNGKVP-------------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA 226 (447)
T ss_dssp EEEEEE------EEEET---TEEEEEEEETTBBS-------------CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC
T ss_pred EEEEEE------EeccC---CceeEEEEECCccC-------------CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc
Confidence 100000 00000 11246799999863 289999999999999999985 34677888774
Q ss_pred cEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeecc-ccccCCCcceEEEEEecCCCCCCCCCCC
Q 010700 245 NLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFV-NESQWKRVTGVAILHYTNSKGKARGPLP 323 (503)
Q Consensus 245 ~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~-~~~~~~~~~~~~il~y~~~~~~~~~~~p 323 (503)
++.||.+ +.+.|.||||++++++++++ | +||++++.... .+. .....+.|.+.+.. ++|
T Consensus 227 ----~~~DG~~------~~~~i~pG~~~~~~~~~~~~-G-~~~yh~h~~~~~~~~---~~Gl~g~l~v~~~~-----~~P 286 (447)
T 2dv6_A 227 ----TGPGGAA------AFTQTDPGEETVVTFKALIP-G-IYVYHCATPSVPTHI---TNGMYGLLLVEPEG-----GLP 286 (447)
T ss_dssp ----CSGGGGG------GGCCBCTTCEEEEEEECCSC-E-EEEEECCSSSHHHHH---HTTCEEEEEEECTT-----CSC
T ss_pred ----cCCCCCC------ccEEeCCCCEEEEEEECCCC-e-EEEEEeCCCChHHHH---hCCCEEEEEEeCCC-----CCC
Confidence 3678874 23469999999999999864 7 89999875311 110 12235666665432 122
Q ss_pred CCCCCCCCccccccccccccccCCCCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhcc
Q 010700 324 EGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLA 403 (503)
Q Consensus 324 ~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~ 403 (503)
.. +.+..+. ..++.... . ...+ +... +.+.. . .......|.|||++|....
T Consensus 287 ---~~--d~~~~~~---~~~~~~~~-~-~~~~------g~~~----~~~~~-~--~~~~~~~~~iNG~~~~~~~------ 337 (447)
T 2dv6_A 287 ---QV--DREFYVM---QGEIYTVK-S-FGTS------GEQE----MDYEK-L--INEKPEYFLFNGSVGSLTR------ 337 (447)
T ss_dssp ---CC--SEEEEEE---EEEECBSS-C-TTCC------EECC----BBHHH-H--HTTCCSEEEETTSTTCCCC------
T ss_pred ---CC--CeeEEEE---ecccccCC-c-cccc------cccc----CChHH-h--hccCCCEEEECCcccCCCC------
Confidence 11 1111110 00111100 0 0000 0000 00000 0 0011346899999874210
Q ss_pred ccccccCccccCCCCCCCCCCCCcceEEEecCCCcEEEEEEeCCC-CCCCceeecCCceEEEeeccCCCCCCCCCCCCCC
Q 010700 404 DWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNND-TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKW 482 (503)
Q Consensus 404 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~vdivi~N~~-~~~HP~HLHGh~F~Vl~~g~g~~~~~~~~~~n~~ 482 (503)
..++.++.|++|+|+|+|.+ ...||||||||+|+||+++++.. .
T Consensus 338 -------------------------~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~----------~ 382 (447)
T 2dv6_A 338 -------------------------SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVV----------S 382 (447)
T ss_dssp -------------------------CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSS----------S
T ss_pred -------------------------CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCccc----------C
Confidence 13456788999999999986 47899999999999999864421 2
Q ss_pred CCC-ccceEEeCCCCcccCcc
Q 010700 483 DGI-ARTTTQARRHLCSNRNY 502 (503)
Q Consensus 483 ~p~-~RDTv~v~~~g~~~~~~ 502 (503)
.|. +|||+.|+++++..|+|
T Consensus 383 ~p~~~~dtv~l~pg~r~~i~~ 403 (447)
T 2dv6_A 383 PPLIGVQTVSVPPGGATIVDF 403 (447)
T ss_dssp CCEEEESEEEECTTEEEEEEE
T ss_pred CCcccccEEEECCCcEEEEEE
Confidence 344 69999999999998876
No 35
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=6.5e-41 Score=366.75 Aligned_cols=250 Identities=12% Similarity=0.104 Sum_probs=195.6
Q ss_pred cCCceEEEEEEEEEEE--eCCCCc----------------eeEE-EEE-----cC-----------CCCCceEEEecCCE
Q 010700 23 AADLFVYFDFEVSYIT--ASPLGV----------------PQQV-IAI-----NG-----------KFPGPTINVTTNNN 67 (503)
Q Consensus 23 ~~~~~~~~~l~i~~~~--~~~dG~----------------~~~~-~~~-----Ng-----------~~pgP~i~~~~Gd~ 67 (503)
-.+.+|+|.|.+++.. .+|+|. ++-+ +.| ++ ++|||+|||++||+
T Consensus 129 ~~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~ 208 (770)
T 2r7e_B 129 FQKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDN 208 (770)
T ss_dssp CCCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSC
T ss_pred CCCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCE
Confidence 3567999999999998 477763 2222 222 23 58999999999999
Q ss_pred EEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCC---------CceeeEEccCchh--hhhc
Q 010700 68 VVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKD---------QVGSFFYFPSLHF--QRAS 136 (503)
Q Consensus 68 v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~---------~~Gt~wyH~H~~~--q~~~ 136 (503)
|+|+|+|.++++++|||||+++..... ||++++||+|+||++|+|+|++++ ++||||||||.+. |+.+
T Consensus 209 v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~ 287 (770)
T 2r7e_B 209 IMVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHS 287 (770)
T ss_dssp EEEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHT
T ss_pred EEEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhC
Confidence 999999999999999999999887643 699889999999999999999974 7999999999875 8999
Q ss_pred CceeeEEEEeCCCCCC--CCCCCCCceEEEEee------eeeCCHHHHHHHhh-cCC-------CCCCCCeEEECCcCCC
Q 010700 137 GGFGGFIINNRAIIPI--PFDTPDGDITILIGD------WYTRNHTALRKTLD-AGK-------GLGMPDGVLINGKGPY 200 (503)
Q Consensus 137 Gl~G~liV~~~~~~~~--~~~~~d~e~~l~l~d------~~~~~~~~~~~~~~-~~~-------~~~~~~~~liNG~~~~ 200 (503)
||+|+|||+++..... .....++|++|++++ |+++.. +..... ... .....+.++|||+.+
T Consensus 288 GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~--~~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~- 364 (770)
T 2r7e_B 288 GLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTEN--MERNCRAPCNIQMEDPTFKENYRFHAINGYIM- 364 (770)
T ss_dssp SCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGG--GSSCSCCSSCCCSSSSSSTTTSCEECTTSCTT-
T ss_pred CceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccc--hhhcccCccccccCCccccccCCccccCCccC-
Confidence 9999999999764321 112457899888754 444321 110000 000 001235689999986
Q ss_pred CCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCC-CeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeC
Q 010700 201 QYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMD 279 (503)
Q Consensus 201 ~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~ 279 (503)
+..+.+++++|++|||||+|++.. ..|.||||||.|+|++.||. .+|++.|.||||++|+|+++
T Consensus 365 ----------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad 429 (770)
T 2r7e_B 365 ----------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPS 429 (770)
T ss_dssp ----------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCS
T ss_pred ----------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeC
Confidence 234778999999999999999875 47999999999999999974 68999999999999999999
Q ss_pred CCCCcceEEEEeee
Q 010700 280 QNASTDYYIVASAR 293 (503)
Q Consensus 280 ~~~g~~y~i~~~~~ 293 (503)
+ +| .|.+.++..
T Consensus 430 ~-pG-~w~~hcH~~ 441 (770)
T 2r7e_B 430 K-AG-IWRVECLIG 441 (770)
T ss_dssp S-CB-CCCBCCCSH
T ss_pred C-CC-ceEEEeccc
Confidence 6 46 787877654
No 36
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=3.8e-41 Score=368.08 Aligned_cols=244 Identities=15% Similarity=0.198 Sum_probs=182.2
Q ss_pred eEEEEEEEEEEEeCCC-CceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCC----CCCCCCCCC--
Q 010700 27 FVYFDFEVSYITASPL-GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQR----RSSWQDGLL-- 99 (503)
Q Consensus 27 ~~~~~l~i~~~~~~~d-G~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~----~~~~~DG~~-- 99 (503)
+..-.+++++.+.... |+.+..|+ ++|||+|||++||+|+|+|+|+|++++||||||+++. +.+++||++
T Consensus 46 ~y~k~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~~DG~p~~Dg~~~~ 122 (742)
T 2r7e_A 46 VYKKTLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQR 122 (742)
T ss_dssp CEECCCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSSSSCCCSSCSCCSS
T ss_pred EEEEEEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCccccCCccCCCCccc
Confidence 3344555555555554 66665554 8999999999999999999999999999999999874 344455554
Q ss_pred -CCCCCCCCCCceEEEEEeCC---------CceeeEEccCchh--hhhcCceeeEEEEeCCCCCCCCCCCCCceEEEEee
Q 010700 100 -GTNCPIPPKWNWTYQFQVKD---------QVGSFFYFPSLHF--QRASGGFGGFIINNRAIIPIPFDTPDGDITILIGD 167 (503)
Q Consensus 100 -~~q~~i~PG~~~~y~f~~~~---------~~Gt~wyH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d 167 (503)
.+||+|+||++|+|+|++++ ++||||||||.+. |+++||+|+|||+++...........+|++|++++
T Consensus 123 ~vtq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~ 202 (742)
T 2r7e_A 123 EKEDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAV 202 (742)
T ss_dssp SSSSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEEC
T ss_pred ccccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeec
Confidence 27999999999999999853 3699999999874 89999999999999765322211223888888764
Q ss_pred ------eeeCCHHHHHHHhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCC-eeeEE
Q 010700 168 ------WYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIST-SLNFR 240 (503)
Q Consensus 168 ------~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~-~~~~~ 240 (503)
|++.........+.........+.++|||+.+ +..+.+++++|++|||||+|++... .|.||
T Consensus 203 ~de~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~-----------~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~h 271 (742)
T 2r7e_A 203 FDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVN-----------RSLPGLIGCHRKSVYWHVIGMGTTPEVHSIF 271 (742)
T ss_dssp CCCSSSSCCCCCC-------CCSCCCCCCCCEETTBCT-----------BCCCCCEECSSSCEEEECCCCCSSSCCCCCC
T ss_pred ccCCccccccccccccccCCCccccccCceEEECCccC-----------CCCcceEEcCCCEEEEEEEeCCCCCcceEEE
Confidence 44432211100011111122356789999986 2347899999999999999999875 79999
Q ss_pred EeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeec
Q 010700 241 IQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (503)
Q Consensus 241 i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~ 294 (503)
||||.|+|++. .+|++.|.|||+++|++++++ +| .|++.++...
T Consensus 272 lhGh~f~Vvg~--------~~Dtv~v~Pg~~~~v~~~~~~-pG-~w~~hCH~~~ 315 (742)
T 2r7e_A 272 LEGHTFLVRNH--------RQASLEISPITFLTAQTLLMD-LG-QFLLFCHISS 315 (742)
T ss_dssp CTTCCCEETTE--------ECCSCCCCTTCCCEEEECCCS-CS-EECCCCCSSS
T ss_pred ECCCEEEEEeE--------ecceEEeCCCcEEEEEEEeCC-Ce-eEEEEeCChh
Confidence 99999999853 378899999999999999996 57 7888777653
No 37
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=3.3e-36 Score=342.15 Aligned_cols=364 Identities=13% Similarity=0.120 Sum_probs=233.9
Q ss_pred ceeEEEEEcCCCCC--ceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCC-CCCCCCCCC-CCCCCCCCCceEEEEEeCC
Q 010700 44 VPQQVIAINGKFPG--PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRR-SSWQDGLLG-TNCPIPPKWNWTYQFQVKD 119 (503)
Q Consensus 44 ~~~~~~~~Ng~~pg--P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~-~~~~DG~~~-~q~~i~PG~~~~y~f~~~~ 119 (503)
..+.+.++||++|| |.|++++||+|+++|.|. .+.+||||+++.+ +.++||++. + |+|.||.+++|+|++ +
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 57899999999999 889999999999999976 4559999999998 899999997 7 999999999999999 5
Q ss_pred CceeeEEccCchhhhhcCceeeEEEEeCCCCCCCCCCCCCceEEEE----eeeeeCCHHHHHHHh--hcCCCCCCCCeEE
Q 010700 120 QVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILI----GDWYTRNHTALRKTL--DAGKGLGMPDGVL 193 (503)
Q Consensus 120 ~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l----~d~~~~~~~~~~~~~--~~~~~~~~~~~~l 193 (503)
++||||||||++.|+.+||+|.|+|++......+...++.|.++++ .||++.....+...+ ..+. .+...+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~---~p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQ---NVSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTC---CCCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCcc---Ccccee
Confidence 8999999999999999999999999987543344346788999999 899998665432211 1111 133444
Q ss_pred ECCcCCC-----------CCC-CC--C---C-----CCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEe
Q 010700 194 INGKGPY-----------QYN-TT--L---V-----PDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAET 251 (503)
Q Consensus 194 iNG~~~~-----------~~~-~~--~---~-----~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~ 251 (503)
+|+.... ... .+ . . ....+.|+|++++|+++++|+.|... ..+.+|.||. .+...
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HGl--~~~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGV--QTESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESSC--BCSCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeeccc--cccCC
Confidence 4432110 000 00 0 0 01234589999999999999999865 4777777774 33322
Q ss_pred cCCccceeeecEEEEcCCceEEEEEEeCCCCC--------cceEEEEeeeccccccCCCcceEEEEEecCCCCCCCCCCC
Q 010700 252 EGSYTVQQNYTSLDIHVGQSYSFLVTMDQNAS--------TDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLP 323 (503)
Q Consensus 252 DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g--------~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p 323 (503)
| ...+.||++++..+...+..| +.||.+.+.....+. ...+ .+.|......... ..
T Consensus 845 -~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q~-~~GL--~G~liV~~~~~l~---~~ 908 (1065)
T 2j5w_A 845 -T---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDL-YSGL--IGPLIVCRRPYLK---VF 908 (1065)
T ss_dssp -C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHHH-HTTC--EEEEEEECCC--------
T ss_pred -C---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHhh-hccc--cceeEecCccccc---cc
Confidence 2 124689999888888764211 278887765421111 1112 3333333221100 00
Q ss_pred CCCCCCCCccccccc--cc-cccccC----CCCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCC
Q 010700 324 EGPNDEFDKTFSMNQ--AR-SIRWNV----SASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNP 396 (503)
Q Consensus 324 ~~p~~~~~~~~~~~~--~~-~~~~~l----~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~ 396 (503)
..+. +.+..+-. .. ...+.+ .... +.|.. ... .+. . .......|.|||+.|..
T Consensus 909 ~~~~---d~D~~l~~~~~d~~~~~y~~~n~~~~~--~~P~~-v~~--~~~-------~----~~~~~~~~~iNG~~~~~- 968 (1065)
T 2j5w_A 909 NPRR---KLEFALLFLVFDENESWYLDDNIKTYS--DHPEK-VNK--DDE-------E----FIESNKMHAINGRMFGN- 968 (1065)
T ss_dssp CCCC---EEEEEEEEEEEEGGGSTTHHHHHHHHC--SCGGG-CCT--TCH-------H----HHHHTEEEEETTBCTTC-
T ss_pred CCCc---ceEEEEEEEeecCCcceeeccCccccc--CCccc-cCc--chh-------h----hhccCceEEECCccCCC-
Confidence 0111 11111100 00 000000 0000 00100 000 000 0 00012357888887641
Q ss_pred CCchhccccccccCccccCCCCCCCCCCCCcceEEEecCCCcEEEEEEeCCC--CCCCceeecCCceEEEeeccCCCCCC
Q 010700 397 STPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNND--TKMHAYHMSGYAFFVVGMDYGEWTDN 474 (503)
Q Consensus 397 ~~P~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~vdivi~N~~--~~~HP~HLHGh~F~Vl~~g~g~~~~~ 474 (503)
. ..+.++.|++|+|+|.|.+ ...||||||||+|+|++++
T Consensus 969 -~-------------------------------~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~------- 1009 (1065)
T 2j5w_A 969 -L-------------------------------QGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG------- 1009 (1065)
T ss_dssp -C-------------------------------CCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT-------
T ss_pred -C-------------------------------ccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC-------
Confidence 1 1234678999999999985 5789999999999999753
Q ss_pred CCCCCCCCCCCccceEEeCCCCcccCcc
Q 010700 475 SRGTYNKWDGIARTTTQARRHLCSNRNY 502 (503)
Q Consensus 475 ~~~~~n~~~p~~RDTv~v~~~g~~~~~~ 502 (503)
|.+||||.|+++++..|||
T Consensus 1010 ---------p~~~DTv~v~pg~~~~v~~ 1028 (1065)
T 2j5w_A 1010 ---------VYSSDVFDIFPGTYQTLEM 1028 (1065)
T ss_dssp ---------CEEESEEEECTTCEEEEEE
T ss_pred ---------CceeeEEEECCCCeEEEEE
Confidence 6899999999999999987
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=2.9e-36 Score=329.58 Aligned_cols=216 Identities=15% Similarity=0.166 Sum_probs=167.1
Q ss_pred CCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCC-----CCC-CCCCCCCCCceEEEEEeCCCce-----
Q 010700 54 KFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDG-----LLG-TNCPIPPKWNWTYQFQVKDQVG----- 122 (503)
Q Consensus 54 ~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG-----~~~-~q~~i~PG~~~~y~f~~~~~~G----- 122 (503)
.+|||+||+++||+|+|+|+|.++++++|||||+++. .+++|| ++. +||+|+||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999874 356665 555 7999999999999999975544
Q ss_pred ----eeEEccCch--hhhhcCceeeEEEEeCCCCC-CC-CCCCCCceEEEEee------eeeCCHHHHHHHhhcCCCCC-
Q 010700 123 ----SFFYFPSLH--FQRASGGFGGFIINNRAIIP-IP-FDTPDGDITILIGD------WYTRNHTALRKTLDAGKGLG- 187 (503)
Q Consensus 123 ----t~wyH~H~~--~q~~~Gl~G~liV~~~~~~~-~~-~~~~d~e~~l~l~d------~~~~~~~~~~~~~~~~~~~~- 187 (503)
|||||||.. .|+++||+|+|||+++.... .. ....|+|++|++++ |++.. .+...........
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~--~~~~~~~~p~~v~~ 604 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTE--NIQRFLPNPAGVQL 604 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHH--HHHHHSSSSSCSCC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeecccccccccccc--chhhcccCchhccc
Confidence 999999986 46899999999999875321 11 12558999999965 44321 1111111000000
Q ss_pred -------CCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCC-CeeeEEEeCCcEEEEEecCCcccee
Q 010700 188 -------MPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQ 259 (503)
Q Consensus 188 -------~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~-~~~~~~i~gh~~~via~DG~~~~p~ 259 (503)
....++|||+.+. ..+ +.+++|++|||||+|+|.. ..|.||||||.|+|+ +.
T Consensus 605 ~~~~~~~~~~~~~ING~~~~-----------~~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~ 664 (742)
T 2r7e_A 605 EDPEFQASNIMHSINGYVFD-----------SLQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MV 664 (742)
T ss_dssp CCHHHHGGGCCBCTTTTCSS-----------CCC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SS
T ss_pred ccccccccCceeeecCcCCC-----------CCc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------cc
Confidence 0124789999861 123 8999999999999998764 469999999999986 45
Q ss_pred eecEEEEcCCceEEEEEEeCCCCCcceEEEEeeec
Q 010700 260 NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (503)
Q Consensus 260 ~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~ 294 (503)
.+|+|.|.||||++|+|+++++ | .|.+.++...
T Consensus 665 ~~Dtv~l~Pg~~~~v~~~ad~p-G-~w~~hcH~~~ 697 (742)
T 2r7e_A 665 YEDTLTLFPFSGETVFMSMENP-G-LWILGCHNSD 697 (742)
T ss_dssp SBCSSCCCCCSSEECCEECCCC-C-CSCCEECCCS
T ss_pred ceeEEEECCCcEEEEEEEcCCC-e-EEEEEeCCch
Confidence 6899999999999999999964 7 7989888653
No 39
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.75 E-value=4.3e-18 Score=170.45 Aligned_cols=216 Identities=14% Similarity=0.118 Sum_probs=133.7
Q ss_pred CCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEE---ecCCccceeeecEEE
Q 010700 189 PDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAE---TEGSYTVQQNYTSLD 265 (503)
Q Consensus 189 ~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via---~DG~~~~p~~~d~v~ 265 (503)
...+++||+.. .|+|++++|+++|+||+|.... .+++|.|| +.+.+ .||.+. +....
T Consensus 23 ~~~~~~NG~~p-------------GP~I~v~~Gd~v~v~v~N~l~~-~~siH~HG--~~~~~~~~~DGvp~----vtq~~ 82 (339)
T 2zwn_A 23 YKVFGFNGQVP-------------GPLIHVQEGDDVIVNVTNNTSL-PHTIHWHG--VHQKGTWRSDGVPG----VTQQP 82 (339)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEEESSS-CBCCEEET--CCCTTCGGGSCCBT----TTBCC
T ss_pred EEEEEECCccC-------------CCeEEEECCCEEEEEEEECCCC-CccEEeCC--CCcCCCcccCCCCc----cccCc
Confidence 35799999964 3999999999999999999864 55555555 55565 499763 23456
Q ss_pred EcCCceEEEEEEeCCCCCcceEEEEeeeccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 010700 266 IHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWN 345 (503)
Q Consensus 266 l~pGeR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~ 345 (503)
|.||||+++.++++ .+| +||.+++.....+.....+.+ +++... ... ..++... +.+..+ ...++.
T Consensus 83 I~PG~~~~y~f~~~-~~G-t~wyH~H~~~~~q~~~~Gl~G-~liV~p-~~~---~~~~~~~----d~e~~l---~l~d~~ 148 (339)
T 2zwn_A 83 IEAGDSYTYKFKAD-RIG-TLWYHCHVNVNEHVGVRGMWG-PLIVDP-KQP---LPIEKRV----TKDVIM---MMSTWE 148 (339)
T ss_dssp BCTTCEEEEEEECC-SCE-EEEEECCSSHHHHTTTSCCEE-EEEEEC-SSC---CTTGGGC----SEEEEE---EEEEEC
T ss_pred cCCCCeEEEEEECC-CCE-EEEEEecCCchhhhhcCCceE-eEEecC-CCc---ccccccC----CceEEE---Eeehee
Confidence 99999999999998 467 999998764321210011222 233322 110 0111000 111100 000111
Q ss_pred CCCCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhccccccccCccccCCCCCCCCCCC
Q 010700 346 VSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPP 425 (503)
Q Consensus 346 l~~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~~~~~~~~~~~~~~~~~p~~~~~ 425 (503)
... ...+... + . .......|.|||+.|..
T Consensus 149 ~~~-~~~~~~~-----g-----------~----~~~~~~~~~ING~~~~~------------------------------ 177 (339)
T 2zwn_A 149 SAV-ADKYGEG-----G-----------T----PMNVADYFSVNAKSFPL------------------------------ 177 (339)
T ss_dssp GGG-TTCTTCC-----C-----------S----TTSCCCEEEETTBCTTS------------------------------
T ss_pred ccc-ccccCCC-----C-----------C----CccccceEEEccccCCC------------------------------
Confidence 100 0000000 0 0 00112468999987631
Q ss_pred CcceEEEecCCCcEEEEEEeCCCCCCCceeecCCceEEEeeccCCCCCCCCCCCCCCCCCccceEEeCCCCcccCcc
Q 010700 426 RMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQARRHLCSNRNY 502 (503)
Q Consensus 426 ~~~~~~~~~~~g~~vdivi~N~~~~~HP~HLHGh~F~Vl~~g~g~~~~~~~~~~n~~~p~~RDTv~v~~~g~~~~~~ 502 (503)
...+.++.|++|+|.|.|.+...||||||||+|+||+..++. +.+|.++||+.|++++...|+|
T Consensus 178 ---~~~~~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~DG~~----------~~~p~~~dtv~l~pg~r~~v~~ 241 (339)
T 2zwn_A 178 ---TQPLRVKKGDVVKIRFFGAGGGIHAMHSHGHDMLVTHKDGLP----------LDSPYYADTVLVSPGERYDVII 241 (339)
T ss_dssp ---SCCEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEE
T ss_pred ---cccEEECCCCEEEEEEEeCCCceEEEEECCcEEEEEEeCCee----------cCCCcEEEEEEECCCCEEEEEE
Confidence 112456789999999999988899999999999999985432 2347899999999998777765
No 40
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.69 E-value=1.3e-15 Score=158.14 Aligned_cols=239 Identities=11% Similarity=0.060 Sum_probs=154.4
Q ss_pred eEEEEEEEEEEEeCCCC-----------ceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCC-CCeeEEE-ccCCCCCCC
Q 010700 27 FVYFDFEVSYITASPLG-----------VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHW-SGIQQRRSS 93 (503)
Q Consensus 27 ~~~~~l~i~~~~~~~dG-----------~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~-~~~siH~-HG~~~~~~~ 93 (503)
.+++.|.++.-....+| .....+++||+. .|.|+|++| ++++||.|... ....+|+ ||..+.. .
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i 228 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-I 228 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-E
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-E
Confidence 45777888776654443 345689999996 699999999 99999999975 5688999 8976554 5
Q ss_pred CCCCCC----C--CCCCCCCCCceEEEEEeCCCceeeEEccCchhhhhcCce-----------eeE-EEEeCCCCCCCCC
Q 010700 94 WQDGLL----G--TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGF-----------GGF-IINNRAIIPIPFD 155 (503)
Q Consensus 94 ~~DG~~----~--~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~-----------G~l-iV~~~~~~~~~~~ 155 (503)
+.||.+ . .+..|.|||++++.+++. +.|+||++++........+. .++ -+....... +.
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~-~~- 305 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLP-LV- 305 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCc-Cc-
Confidence 799964 2 457799999999999995 68999999986433211111 111 111111000 00
Q ss_pred CCCCceEEEEeeeeeCCH-HHHHHHhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCC
Q 010700 156 TPDGDITILIGDWYTRNH-TALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS 234 (503)
Q Consensus 156 ~~d~e~~l~l~d~~~~~~-~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~ 234 (503)
..++...|..+..... ......+... ..|+|||+.+.. ..+.+.++.|++++|+|+|.
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~------~~~~iNg~~f~~----------~~~~~~~~~G~~~~~~l~N~--- 364 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLG------DDPGINGQLWDV----------NRIDVTAQQGTWERWTVRAD--- 364 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEEC------SSSSBTTBCCCT----------TCCCEEEETTCEEEEEEEEE---
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEe------eEEEECCEeCCC----------CCCcEEcCCCCEEEEEEECC---
Confidence 0000000000000000 0000000000 047899998731 23568999999999999997
Q ss_pred CeeeEEEeCCcEEEEEecCCcc---ceeeecEEEEcCCceEEEEEEeCCCCC--cceEEEEeeec
Q 010700 235 TSLNFRIQNHNLLLAETEGSYT---VQQNYTSLDIHVGQSYSFLVTMDQNAS--TDYYIVASARF 294 (503)
Q Consensus 235 ~~~~~~i~gh~~~via~DG~~~---~p~~~d~v~l~pGeR~dvlv~~~~~~g--~~y~i~~~~~~ 294 (503)
..|+||||||.|+|++.||.+. +|...|+|.+ |+++.+.+++++++. +.|.++|+...
T Consensus 365 ~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~ 427 (451)
T 2uxt_A 365 EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLE 427 (451)
T ss_dssp EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHH
T ss_pred CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchh
Confidence 3899999999999999999875 4788999999 999999999986521 14778887653
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.69 E-value=5.5e-17 Score=160.70 Aligned_cols=217 Identities=16% Similarity=0.118 Sum_probs=136.8
Q ss_pred CeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEE-EEecCCccceeeecEEEEcC
Q 010700 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLL-AETEGSYTVQQNYTSLDIHV 268 (503)
Q Consensus 190 ~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~v~l~p 268 (503)
..+++||+.. .|+|+++.|+++++|+.|.... .+.+|+||....- .+.||.+- +....|.|
T Consensus 23 ~~~~~ng~~p-------------GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~P 84 (318)
T 3g5w_A 23 HTFAFNGQVP-------------APLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEP 84 (318)
T ss_dssp EEEEETTBSS-------------CCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCT
T ss_pred EEEEECCccC-------------CceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCC
Confidence 5799999864 3999999999999999998764 7899999986542 36788763 22357899
Q ss_pred CceEEEEEEeCCCCCcceEEEEeeeccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCccccccccccccccCCC
Q 010700 269 GQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSA 348 (503)
Q Consensus 269 GeR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~ 348 (503)
||+++..++++ .+| +||..++.....+.....+.+ +++... ... .+.+.. . +.+..+ ...++....
T Consensus 85 G~~~~y~f~~~-~~G-t~wYH~H~~~~~~~~~~Gl~G-~lIV~~-~~~---~~~~~~--~--d~e~~l---~l~dw~~~~ 150 (318)
T 3g5w_A 85 GDTFTYKFKAE-PAG-TMWYHCHVNVNEHVTMRGMWG-PLIVEP-KNP---LPIEKT--V--TKDYIL---MLSDWVSSW 150 (318)
T ss_dssp TCEEEEEEECC-SCE-EEEEECCSSHHHHHHHSCCEE-EEEEEC-SSC---CHHHHT--C--CEEEEE---EEEEECGGG
T ss_pred CCEEEEEEEcC-CCE-EEEEEccCChhhhhccCCCEE-EEEEcC-CCc---cccccc--c--cceeEE---EEEeecccc
Confidence 99999999997 467 899988764321100011222 233322 210 000000 0 111111 000111100
Q ss_pred CCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhccccccccCccccCCCCCCCCCCCCcc
Q 010700 349 SGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRME 428 (503)
Q Consensus 349 ~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~~~~~~~~~~~~~~~~~p~~~~~~~~ 428 (503)
.. .... +. . .......|.|||+.|..
T Consensus 151 ~~-~~~~------~~------------~--~~~~~d~~~ING~~~~~--------------------------------- 176 (318)
T 3g5w_A 151 AN-KPGE------GG------------I--PGDVFDYYTINAKSFPE--------------------------------- 176 (318)
T ss_dssp TT-CTTC------CC------------C--TTCCCCEEEETTBCBTS---------------------------------
T ss_pred cc-cccc------CC------------C--CCCcCcEEEEcCcCCCC---------------------------------
Confidence 00 0000 00 0 00112358999998731
Q ss_pred eEEEecCCCcEEEEEEeCCCCCCCceeecCCceEEEeeccCCCCCCCCCCCCCCCCCccceEEeCCCCcccCcc
Q 010700 429 TSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQARRHLCSNRNY 502 (503)
Q Consensus 429 ~~~~~~~~g~~vdivi~N~~~~~HP~HLHGh~F~Vl~~g~g~~~~~~~~~~n~~~p~~RDTv~v~~~g~~~~~~ 502 (503)
...+.++.|++|.|.|.|.+...||||||||+|+|+++.++. +.+|.+|||+.|+|++...|+|
T Consensus 177 ~~~l~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~dG~~----------~~~p~~~dtv~l~pger~~v~~ 240 (318)
T 3g5w_A 177 TQPIRVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAFKDGFP----------LDKPIKGDTVLIGPGERYDVIL 240 (318)
T ss_dssp SCCEEECTTCEEEEEEEECSSSCEEEEETTSCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEE
T ss_pred CccEEeCCCCEEEEEEEeCCCceEEEEECCcEEEEEecCCcc----------cCCCccccEEEECCCCEEEEEE
Confidence 012456889999999999988899999999999999985432 2357899999999999887764
No 42
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.68 E-value=8.5e-16 Score=159.25 Aligned_cols=233 Identities=12% Similarity=0.077 Sum_probs=161.6
Q ss_pred eEEEEEEEEEEEeCC------------CCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCC-CCeeEEEccCCCCCCC
Q 010700 27 FVYFDFEVSYITASP------------LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSS 93 (503)
Q Consensus 27 ~~~~~l~i~~~~~~~------------dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~ 93 (503)
.+++.|.++.-.... .|.....+++||+. .|.|+|++| ++++||.|... ....+|++|..+.. .
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v-i 222 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL-I 222 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-E
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-E
Confidence 456777766543321 13455689999997 699999999 99999999965 56899999987654 5
Q ss_pred CCCCCCC------CCCCCCCCCceEEEEEeCCCceeeEEccCchhh--hh-cCc--------------eeeEEEEeCC-C
Q 010700 94 WQDGLLG------TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQ--RA-SGG--------------FGGFIINNRA-I 149 (503)
Q Consensus 94 ~~DG~~~------~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q--~~-~Gl--------------~G~liV~~~~-~ 149 (503)
+.||.+. ....|.|||+++..+++. ++|.||++|+.... .. .|| ....+++-.. .
T Consensus 223 ~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~-~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (439)
T 2xu9_A 223 AADGGFLEEPLEVSELLLAPGERAEVLVRLR-KEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP 301 (439)
T ss_dssp EETTEEEEEEEEESCEEECTTCEEEEEEECC-SSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC
T ss_pred ecCCCCCCCceEeceEEECCceeEEEEEEcC-CCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC
Confidence 7899752 345699999999999995 69999999974211 10 122 1222222211 1
Q ss_pred CC--CC-----CCCC---CCceEEEEeeeeeCCHHHHHHHhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEe
Q 010700 150 IP--IP-----FDTP---DGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVH 219 (503)
Q Consensus 150 ~~--~~-----~~~~---d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~ 219 (503)
.. .| +... ..+..+.+.-- + ....|.|||+.+. ...+.+.++
T Consensus 302 ~~~~~p~~l~~~~~l~~~~~~r~~~l~~~-----------~-------~g~~~~iNg~~~~----------~~~~~~~~~ 353 (439)
T 2xu9_A 302 KPLPLPKALSPFPTLPAPVVTRRLVLTED-----------M-------MAARFFINGQVFD----------HRRVDLKGQ 353 (439)
T ss_dssp CCCCCCSCCCCCCCCCCCSEEEEEEEEEE-----------G-------GGTEEEETTBCCC----------TTCCCEEEC
T ss_pred ccccCcccCCCcccCCCCCcceEEEEEee-----------c-------cCceEeECCEECC----------CCCCceecC
Confidence 01 11 1000 00011111100 0 0137899999872 122458899
Q ss_pred CCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCcc-ceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeec
Q 010700 220 PGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT-VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (503)
Q Consensus 220 ~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~-~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~ 294 (503)
.|++++|+|.|.+.. .|+||||||.|+|++.+|... .|...|++.+.||+++.+.+++++ +| .|.++|+...
T Consensus 354 ~g~~~~~~~~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~adn-pG-~w~~HCHil~ 426 (439)
T 2xu9_A 354 AQTVEVWEVENQGDM-DHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLRE-KG-RTVFHCHIVE 426 (439)
T ss_dssp TTCEEEEEEEECSSS-CEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECCS-CE-EEEEEESSHH
T ss_pred CCCEEEEEEEcCCCC-CCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcCC-CC-CEEEECCcch
Confidence 999999999998765 899999999999999999775 478899999999999999999875 56 6777887653
No 43
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.66 E-value=3e-16 Score=153.44 Aligned_cols=202 Identities=15% Similarity=0.118 Sum_probs=133.5
Q ss_pred CCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcC
Q 010700 189 PDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHV 268 (503)
Q Consensus 189 ~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~p 268 (503)
...|++||+.. .|+|+++.|+++++|+.|.... .+.+|+||.. ..+.||.+- .+...|.|
T Consensus 54 ~~~~~~ng~~p-------------gP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~P 113 (288)
T 3gdc_A 54 FKGWSYNGRIP-------------GPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAP 113 (288)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCT
T ss_pred EEEEEECCccC-------------CCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECC
Confidence 35899999975 3899999999999999999865 8899999986 457888763 23456899
Q ss_pred CceEEEEEEeCCCCCcceEEEEeeecc-ccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCccccccccccccccCC
Q 010700 269 GQSYSFLVTMDQNASTDYYIVASARFV-NESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVS 347 (503)
Q Consensus 269 GeR~dvlv~~~~~~g~~y~i~~~~~~~-~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~ 347 (503)
||+++..++++ .+| .||..++.... .+. ...+ .+.|....... .+.. +..+.+- ...+...
T Consensus 114 G~~~~y~f~~~-~~G-t~~yH~H~~~~~~~~-~~Gl--~G~liV~~~~~--------~~~~--d~e~~l~---~~d~~~~ 175 (288)
T 3gdc_A 114 GQSFTYEFDAT-PFG-THLYHCHQSPLAPHI-AKGL--YGGFIVEPKEG--------RPPA--DDEMVMV---MNGYNTD 175 (288)
T ss_dssp TCEEEEEEECC-SCE-EEEEECCCSSHHHHH-HTTC--EEEEEEECSSC--------CCCC--SEEEEEE---EEEECCS
T ss_pred CCEEEEEEEcC-CCc-cEEEEecCcchHHHH-hCcC--eEEEEEeCCcc--------CCCC--cceEEEE---EeeEecC
Confidence 99999999996 567 89998876521 110 1112 33333322110 0100 1011100 0000000
Q ss_pred CCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhccccccccCccccCCCCCCCCCCCCc
Q 010700 348 ASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRM 427 (503)
Q Consensus 348 ~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~~~~~~~~~~~~~~~~~p~~~~~~~ 427 (503)
.......|+|||+.|....
T Consensus 176 -------------------------------~g~~~~~~~iNG~~~~~~~------------------------------ 194 (288)
T 3gdc_A 176 -------------------------------GGDDNEFYSVNGLPFHFMD------------------------------ 194 (288)
T ss_dssp -------------------------------STTCCSEEEETTSTTHHHH------------------------------
T ss_pred -------------------------------CCCCcceEEECcccccccC------------------------------
Confidence 0001236899999873110
Q ss_pred ceEEEecCCCcEEEEEEeCCCCC--CCceeecCCceEEEeeccCCCCCCCCCCCCCCCCCccceEEeCCCCcccCcc
Q 010700 428 ETSVINGTYRGFMEVILQNNDTK--MHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQARRHLCSNRNY 502 (503)
Q Consensus 428 ~~~~~~~~~g~~vdivi~N~~~~--~HP~HLHGh~F~Vl~~g~g~~~~~~~~~~n~~~p~~RDTv~v~~~g~~~~~~ 502 (503)
..+.++.|++|.|.|.|.+.. .||||||||.|+|++.|.. +..|.++||+.|+|++...|+|
T Consensus 195 --~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~ 258 (288)
T 3gdc_A 195 --FPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILEL 258 (288)
T ss_dssp --SCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEE
T ss_pred --cccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEE
Confidence 123457899999999999753 5999999999999874321 2346899999999999888765
No 44
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.65 E-value=3.3e-16 Score=156.68 Aligned_cols=182 Identities=13% Similarity=0.085 Sum_probs=120.6
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCC-----------
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQN----------- 281 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~----------- 281 (503)
.|+|++++|+++|+||+|.... .+.+|.||..+. .+.||.++ +...|.|||+++..++++++
T Consensus 76 GP~I~v~~Gd~v~v~~~N~l~~-~~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~ 148 (343)
T 3cg8_A 76 GPLIEVNEGDTLHIEFTNTMDV-RASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 148 (343)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCEEEEECCCEEEEEEEECCCC-CeeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCCC
Confidence 4999999999999999999965 677899988876 68899874 23468999999999999764
Q ss_pred -CCcceEEEEeeecc----ccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCCCCCCC
Q 010700 282 -ASTDYYIVASARFV----NESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQ 356 (503)
Q Consensus 282 -~g~~y~i~~~~~~~----~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~ 356 (503)
.| .||...+.... .+. ...+.+..|++..+.. .|
T Consensus 149 ~~G-t~~YH~h~~~~~~~~~~~-~~Gl~G~~iV~~~~~~---------~p------------------------------ 187 (343)
T 3cg8_A 149 SAG-YWHYHDHVVGTEHGTGGI-RNGLYGPVIVRRKGDV---------LP------------------------------ 187 (343)
T ss_dssp SCE-EEEEECSSSSSTTCHHHH-HHTCEEEEEEECTTCC---------CC------------------------------
T ss_pred Cce-EEEEecCccccccchhhh-hcCCeEEEEEecCCCC---------CC------------------------------
Confidence 23 55555443210 110 1123333333321110 00
Q ss_pred CCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhccccccccCccccCCCCCCCCCCCCcceEEEecCC
Q 010700 357 GSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTY 436 (503)
Q Consensus 357 ~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 436 (503)
++.+.+.. ..|+|||+.|. . ...+.++.
T Consensus 188 ----------d~e~~l~~---------~d~~iNG~~~~--~-------------------------------~~~l~v~~ 215 (343)
T 3cg8_A 188 ----------DATHTIVF---------NDMTINNRKPH--T-------------------------------GPDFEATV 215 (343)
T ss_dssp ----------SEEEEEEE---------ETTEETTCCTT--C-------------------------------CCCEEEET
T ss_pred ----------CceEEEEc---------ccceecccCCC--C-------------------------------CccEEeCC
Confidence 01122211 01689998752 1 12345788
Q ss_pred CcEEEEEEeCCCCCCCceeecCCceEEEeeccCCCCCCCCCCCCCCCCCccceEEeCCCCcccCcc
Q 010700 437 RGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQARRHLCSNRNY 502 (503)
Q Consensus 437 g~~vdivi~N~~~~~HP~HLHGh~F~Vl~~g~g~~~~~~~~~~n~~~p~~RDTv~v~~~g~~~~~~ 502 (503)
|++|+|+|.|.+...||||||||.|+|++ .|.+... ...+.+|||+.|+|+....++|
T Consensus 216 Ge~vri~l~N~g~~~HpfHlHGh~f~v~~--~G~~~~p------~~~~~~~Dtv~v~PG~~~~v~~ 273 (343)
T 3cg8_A 216 GDRVEIVMITHGEYYHTFHMHGHRWADNR--TGILTGP------DDPSRVIDNKITGPADSFGFQI 273 (343)
T ss_dssp TCEEEEEEEEESSCCEEEEETTCCEESSS--SSSCCST------TCCCCEESEEEECTTCEEEEEE
T ss_pred CCEEEEEEEcCCccccccEecCcEEEEec--cCcccCC------CCcccceeeEEeCCCCEEEEEE
Confidence 99999999999989999999999999974 3433211 1135689999999999877765
No 45
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.62 E-value=8.3e-17 Score=132.90 Aligned_cols=89 Identities=17% Similarity=0.238 Sum_probs=70.6
Q ss_pred CCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCC--CCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCch
Q 010700 54 KFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRS--SWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH 131 (503)
Q Consensus 54 ~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~--~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~ 131 (503)
+|++|+|++++||+|+ ++|....++++||||..+... ..+||.+..++.|.||++++|.|++++++|+||||||
T Consensus 15 ~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~-- 90 (105)
T 3cvb_A 15 QFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA-- 90 (105)
T ss_dssp CEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT--
T ss_pred EEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC--
Confidence 6778999999999975 679988999999999865320 0122222235779999999999998668999999999
Q ss_pred hhhhcCceeeEEEEe
Q 010700 132 FQRASGGFGGFIINN 146 (503)
Q Consensus 132 ~q~~~Gl~G~liV~~ 146 (503)
.+..+||.|.|+|++
T Consensus 91 ~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PHRGAGMVGKITVEG 105 (105)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred CchhcCCEEEEEEcC
Confidence 566789999999974
No 46
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.60 E-value=5.9e-14 Score=147.75 Aligned_cols=261 Identities=13% Similarity=0.083 Sum_probs=162.6
Q ss_pred EEEEEEEEEEeCCCCc-----eeEEEEEcCCCC--------CceEEEecCCEEEEEEEeCCC-CCeeEEEccCCCCCCCC
Q 010700 29 YFDFEVSYITASPLGV-----PQQVIAINGKFP--------GPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSW 94 (503)
Q Consensus 29 ~~~l~i~~~~~~~dG~-----~~~~~~~Ng~~p--------gP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~ 94 (503)
++-|.++.-....++. ....++|||+.. .|.|+|++|+++|+||.|... ....+|++|..+.. .+
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~ 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IE 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EE
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-Ee
Confidence 4556665544333332 245789999853 289999999999999999975 56889999986654 57
Q ss_pred CCCCCC-----CCCCCCCCCceEEEEEeCCCceeeEEccCch--hh-----hhcCceeeEEEEeCCCCCCCCCCCCCceE
Q 010700 95 QDGLLG-----TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH--FQ-----RASGGFGGFIINNRAIIPIPFDTPDGDIT 162 (503)
Q Consensus 95 ~DG~~~-----~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~--~q-----~~~Gl~G~liV~~~~~~~~~~~~~d~e~~ 162 (503)
.||.+. ....|.|||+++..+++.+.+|.||.+++.. .+ ...|+..+++.........|......+.
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~- 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP- 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-
Confidence 899752 3456899999999999964579999998753 11 2234433444433221111110000000
Q ss_pred EEEeeeeeCCH--HHHH---------HHhhcCCCCCCCCeEEECCcCCCCCCCC-----CCC------CCCCceeEEEeC
Q 010700 163 ILIGDWYTRNH--TALR---------KTLDAGKGLGMPDGVLINGKGPYQYNTT-----LVP------DGIDYETIEVHP 220 (503)
Q Consensus 163 l~l~d~~~~~~--~~~~---------~~~~~~~~~~~~~~~liNG~~~~~~~~~-----~~~------~~~~~~~~~v~~ 220 (503)
..+.+...... .... ..+...... ....|.|||+.+...... ..+ .......+.++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~-~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLGF-SGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEEE-ETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEeec-cCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 00000000000 0000 000000000 012689999987321100 000 001236789999
Q ss_pred CcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCcc----ceeeecEEEE-cCCceEEEEEEeCCCCCcceEEEEeeec
Q 010700 221 GKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT----VQQNYTSLDI-HVGQSYSFLVTMDQNASTDYYIVASARF 294 (503)
Q Consensus 221 G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~----~p~~~d~v~l-~pGeR~dvlv~~~~~~g~~y~i~~~~~~ 294 (503)
|++++++++|......|+||||||.|+|++.+|... +|...|+|.| .||+++.+.++++++ | .|.++++...
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adnP-G-~W~~HCHil~ 456 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNP-G-PWFFHCHIEF 456 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCSC-E-EEEEEESSHH
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCCC-e-eeeEecCchh
Confidence 999999999654455899999999999999998752 5889999999 799999999999854 6 6777887653
No 47
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.60 E-value=4.3e-14 Score=149.34 Aligned_cols=241 Identities=12% Similarity=0.099 Sum_probs=153.7
Q ss_pred eEEEEEcCCCC---------CceEEEecCCEEEEEEEeCCC-CCeeEEEccCCCCCCCCCCCCCC-----CCCCCCCCCc
Q 010700 46 QQVIAINGKFP---------GPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWN 110 (503)
Q Consensus 46 ~~~~~~Ng~~p---------gP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DG~~~-----~q~~i~PG~~ 110 (503)
...++|||+.. -|.|+|++|+++|+||.|... ....+|++|..+.. .+.||.+. ....|.|||+
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTV-IEVDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEE-EecCCccccceeeeeEEEcccce
Confidence 45789999853 189999999999999999975 56789999986654 57899752 3456899999
Q ss_pred eEEEEEeCCCceeeEEccCchh---hhhcCceeeEEEEeCCCCCCCCCCCCCceEEEEeeeeeCCH-------H----HH
Q 010700 111 WTYQFQVKDQVGSFFYFPSLHF---QRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNH-------T----AL 176 (503)
Q Consensus 111 ~~y~f~~~~~~Gt~wyH~H~~~---q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~-------~----~~ 176 (503)
++..+++.+.+|.||.+++... ....|+..+++.........|..... +. ..+.+...... . ..
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~-~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SG-TALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CS-CBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-cc-cccchhhcccCCcccCCCcccCCcc
Confidence 9999999645799999998541 12234433444433221111110000 00 00000000000 0 00
Q ss_pred HHHhhcCC-CCCCCCeEEECCcCCCCCCCC-C----------CCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCC
Q 010700 177 RKTLDAGK-GLGMPDGVLINGKGPYQYNTT-L----------VPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNH 244 (503)
Q Consensus 177 ~~~~~~~~-~~~~~~~~liNG~~~~~~~~~-~----------~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh 244 (503)
...+.... .......|.|||+.+...... + .......+.+.++.|++++|+++| ...|+||||||
T Consensus 348 ~~~~~l~~~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHGh 424 (521)
T 1v10_A 348 DINLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHGH 424 (521)
T ss_dssp SEEEECCEECCSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESSC
T ss_pred eEEEEEEEecCCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEccc
Confidence 00000000 000112688999987321100 0 000012367899999999999999 34899999999
Q ss_pred cEEEEEecCCc----cceeeecEEEE-cCCceEEEEEEeCCCCCcceEEEEeeec
Q 010700 245 NLLLAETEGSY----TVQQNYTSLDI-HVGQSYSFLVTMDQNASTDYYIVASARF 294 (503)
Q Consensus 245 ~~~via~DG~~----~~p~~~d~v~l-~pGeR~dvlv~~~~~~g~~y~i~~~~~~ 294 (503)
.|+|++.+|.. .+|...|++.+ .||+++.+.++++++ | .|.++++...
T Consensus 425 ~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNP-G-~W~~HCHi~~ 477 (521)
T 1v10_A 425 NFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNP-G-PWFLHCHIDW 477 (521)
T ss_dssp CEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCSC-E-EEEEEESCHH
T ss_pred eEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCCC-e-eEEEeeChHH
Confidence 99999999865 25889999999 799999999999864 6 6777887653
No 48
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.59 E-value=5.4e-15 Score=143.59 Aligned_cols=99 Identities=18% Similarity=0.301 Sum_probs=84.9
Q ss_pred EEEcCCC--CCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCC-------C--CCCCCCCCCceEEEEEe
Q 010700 49 IAINGKF--PGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL-------G--TNCPIPPKWNWTYQFQV 117 (503)
Q Consensus 49 ~~~Ng~~--pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~-------~--~q~~i~PG~~~~y~f~~ 117 (503)
|+|||+. ++|.|++++||+|+++|.|.....+++||||..+... .||.. . ..+.|.||++++|.|++
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~ 234 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 234 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred cccceecccCCCCEEEecCCEEEEEEecCCCcceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEEe
Confidence 6999997 8999999999999999999998999999999865432 34431 1 33569999999999998
Q ss_pred CC--CceeeEEccCchhhhhcCceeeEEEEeCCC
Q 010700 118 KD--QVGSFFYFPSLHFQRASGGFGGFIINNRAI 149 (503)
Q Consensus 118 ~~--~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~ 149 (503)
.+ .+|+||||||...+...||.|.|+|++++.
T Consensus 235 ~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 235 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred ccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 42 599999999999999999999999999765
No 49
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.56 E-value=9.6e-14 Score=144.39 Aligned_cols=241 Identities=15% Similarity=0.123 Sum_probs=158.8
Q ss_pred EEEEEEEEEEEeCCCCc-------------eeEEEEEcCCCCCceEEEecCCEEEEEEEeCCC-CCeeEEEccCCCCCCC
Q 010700 28 VYFDFEVSYITASPLGV-------------PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSS 93 (503)
Q Consensus 28 ~~~~l~i~~~~~~~dG~-------------~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~ 93 (503)
.+| |.++......+|. ....+++||+. .|.|.|++|+ |+|+.|... +...+|++|..+.. .
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~v-I 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFIL-V 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEE-E
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEE-E
Confidence 445 6666655544443 34679999997 5899999999 999999964 67899999987544 6
Q ss_pred CCCCCC----C--CCCCCCCCCceEEEEEeCCCceeeEEccCchhhhhcCc--------eeeEEEEeC-CCCCCC-----
Q 010700 94 WQDGLL----G--TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGG--------FGGFIINNR-AIIPIP----- 153 (503)
Q Consensus 94 ~~DG~~----~--~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl--------~G~liV~~~-~~~~~~----- 153 (503)
+.||.. . ....|.|||+++..+++. +.|+|...++.... +|+ .-.+-+... .....|
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~ 332 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYYDR--DKMMVKEEPNTLFLANINLKKENVELPKNLKI 332 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEECCCCC--CCSSCCCCCCCEEEEEEEEECCCCCCCSCSCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecccc--cCccccCCCCceeEEEEecCCCCccCCccccC
Confidence 799742 2 356699999999999995 67887776653211 111 111222211 111111
Q ss_pred ---CCCCCCceEEEEeeeeeCCHHHHHHHhhcCCCC---CCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEE
Q 010700 154 ---FDTPDGDITILIGDWYTRNHTALRKTLDAGKGL---GMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIR 227 (503)
Q Consensus 154 ---~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~---~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlR 227 (503)
.+..+.+..+.++..... +......+... .....++|||+.+. .+.+.+.++.|++++|+
T Consensus 333 ~~~~~~~~~~r~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~iNG~~~~----------~~~~~~~~~~G~~v~w~ 398 (481)
T 3zx1_A 333 FKPSEEPKEFKEIIMSEDHMQ----MHGMMGKSEGELKIALASMFLINRKSYD----------LKRIDLSSKLGVVEDWI 398 (481)
T ss_dssp CCCCCCCCEEEEEEEEECCST----TTTGGGCCHHHHHHHHHTTEEETTBCCC----------TTCCCEEEETTCCEEEE
T ss_pred CCCCCCCCcEEEEEEeccchh----cccccccccccccccccceeEECCEeCC----------CCCceEEeCCCCEEEEE
Confidence 111223333444322110 00000000000 00135999999872 13477999999999999
Q ss_pred EeEeCCCCeeeEEEeCCcEEEEEe--cCCccc---eeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeee
Q 010700 228 VHNVGISTSLNFRIQNHNLLLAET--EGSYTV---QQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (503)
Q Consensus 228 liN~g~~~~~~~~i~gh~~~via~--DG~~~~---p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~ 293 (503)
|+|.+.. .|+||||||.|+|++. +|.... +...|+|.|.|||++.+.++++. +| .|.+.++..
T Consensus 399 l~N~~~~-~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~-pG-~w~~HCHil 466 (481)
T 3zx1_A 399 VINKSHM-DHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDF-KG-LRMYHCHIL 466 (481)
T ss_dssp EEECSSS-CEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCCS-CE-EEEEEESSH
T ss_pred EEcCCCC-ceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcCC-Ce-eEEEEcCCh
Confidence 9997754 9999999999999999 887653 56899999999999999999974 56 677777654
No 50
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.49 E-value=5.6e-13 Score=138.64 Aligned_cols=250 Identities=14% Similarity=0.074 Sum_probs=156.7
Q ss_pred EEEEEEEEEEEeCCCC--------------ceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCC-CCeeEEE-ccCCCCC
Q 010700 28 VYFDFEVSYITASPLG--------------VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHW-SGIQQRR 91 (503)
Q Consensus 28 ~~~~l~i~~~~~~~dG--------------~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~-~~~siH~-HG~~~~~ 91 (503)
.++.|.++.-....+| .....+++||+. .|.+.+ +|+++|+||.|... +...+++ +|..+..
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 3666777665554443 234679999996 488876 67899999999964 5678888 6765443
Q ss_pred CCCCCCCC----C--CCCCCCCCCceEEEEEeCCCceeeEEccCchhhhh------cCceeeEEEEeC---CCCCCCC--
Q 010700 92 SSWQDGLL----G--TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRA------SGGFGGFIINNR---AIIPIPF-- 154 (503)
Q Consensus 92 ~~~~DG~~----~--~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~------~Gl~G~liV~~~---~~~~~~~-- 154 (503)
.+.||.+ . ....|.|||+++..+++. +.+.|+.-+....... ..-.-.+-|.+. .....|.
T Consensus 229 -Ia~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L 306 (488)
T 3od3_A 229 -IASDGGLLPEPVKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL 306 (488)
T ss_dssp -EEETTEEEEEEEEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCC
T ss_pred -EEeCCCcccCccEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCccc
Confidence 6799953 2 356699999999999995 5677766554211100 000012223321 1111110
Q ss_pred ------CC----CCCceEEEEeeeeeCC--HHHHHH-H----hh------------cCCCC--------CCCCeEEECCc
Q 010700 155 ------DT----PDGDITILIGDWYTRN--HTALRK-T----LD------------AGKGL--------GMPDGVLINGK 197 (503)
Q Consensus 155 ------~~----~d~e~~l~l~d~~~~~--~~~~~~-~----~~------------~~~~~--------~~~~~~liNG~ 197 (503)
+. ..+++.+.+... .+. ...+.. + +. .|... .....|+|||+
T Consensus 307 ~~~~~~~~~~~~~~r~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~ 385 (488)
T 3od3_A 307 SSLPALPSLEGLTVRKLQLSMDPM-LDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQ 385 (488)
T ss_dssp CCCCCCCCCTTCCEEEEEEEECHH-HHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTB
T ss_pred ccCCCCcccccccceEEEEEeccc-ccccccccccccccccccccccccccccccccCccccccccccccccceeeECCe
Confidence 00 113333433210 000 000000 0 00 00000 01124899999
Q ss_pred CCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccc---eeeecEEEEcCCceEEE
Q 010700 198 GPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTV---QQNYTSLDIHVGQSYSF 274 (503)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~---p~~~d~v~l~pGeR~dv 274 (503)
.+. .+.+.++++.|++++|+|+|.+....|+||||||.|+|++.||.... +.+.|+|.|. |+++.+
T Consensus 386 ~~~----------~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i 454 (488)
T 3od3_A 386 AFD----------MNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEV 454 (488)
T ss_dssp CCC----------TTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEE
T ss_pred eCC----------CCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEE
Confidence 972 23477899999999999999986558999999999999999998764 3578999999 999999
Q ss_pred EEEeCCCCC--cceEEEEeee
Q 010700 275 LVTMDQNAS--TDYYIVASAR 293 (503)
Q Consensus 275 lv~~~~~~g--~~y~i~~~~~ 293 (503)
+++++++++ +.|.++++..
T Consensus 455 ~~~f~~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 455 LVKFNHDAPKEHAYMAHCHLL 475 (488)
T ss_dssp EECBCSCCCGGGCEEEEESSH
T ss_pred EEEeccCCCCCCCEEEeCCch
Confidence 999986542 2677788764
No 51
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.48 E-value=1.8e-12 Score=135.61 Aligned_cols=243 Identities=12% Similarity=0.075 Sum_probs=152.5
Q ss_pred eeEEEEEcCCC---------CCceEEEecCCEEEEEEEeCCC-CCeeEEEccCCCCCCCCCCCCCC-----CCCCCCCCC
Q 010700 45 PQQVIAINGKF---------PGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKW 109 (503)
Q Consensus 45 ~~~~~~~Ng~~---------pgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DG~~~-----~q~~i~PG~ 109 (503)
....++|||+- +-|.|+|++|+++++||.|... ....+|++|..+.. .+.||.+. ....|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCce
Confidence 35679999972 3479999999999999999854 66889999987554 67899753 235699999
Q ss_pred ceEEEEEeCCCceeeEEccCch--h-hhhcCceeeEEEEeCCCCCCCCCCCCC-ceEEEEeeeeeCCHHHHHHHhhcCCC
Q 010700 110 NWTYQFQVKDQVGSFFYFPSLH--F-QRASGGFGGFIINNRAIIPIPFDTPDG-DITILIGDWYTRNHTALRKTLDAGKG 185 (503)
Q Consensus 110 ~~~y~f~~~~~~Gt~wyH~H~~--~-q~~~Gl~G~liV~~~~~~~~~~~~~d~-e~~l~l~d~~~~~~~~~~~~~~~~~~ 185 (503)
+++..+++.+..|.||.++... . ....|..-+++.........|...... ... .+.+........ ....+..
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~---~~~p~~~ 321 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSR---NGVPGNP 321 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSC---CCCSSCS
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-cccccccccccc---ccCCCcc
Confidence 9999999954569999998642 1 122233334444432211111100000 000 000000000000 0000000
Q ss_pred -C------------CCCCeEEECCcCCCCCCCC-----------CCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEE
Q 010700 186 -L------------GMPDGVLINGKGPYQYNTT-----------LVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRI 241 (503)
Q Consensus 186 -~------------~~~~~~liNG~~~~~~~~~-----------~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i 241 (503)
. .....|.|||+.+..-... .........++.++.|++++|.|.|......|+||+
T Consensus 322 ~~~~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HL 401 (495)
T 3t6v_A 322 HQGGADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHL 401 (495)
T ss_dssp STTCSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEE
T ss_pred CCCCCcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceee
Confidence 0 0123689999987421100 000011235789999999999998433345899999
Q ss_pred eCCcEEEEEecCCcc----ceeeecEEEEcC-CceEEEEEEeCCCCCcceEEEEeeec
Q 010700 242 QNHNLLLAETEGSYT----VQQNYTSLDIHV-GQSYSFLVTMDQNASTDYYIVASARF 294 (503)
Q Consensus 242 ~gh~~~via~DG~~~----~p~~~d~v~l~p-GeR~dvlv~~~~~~g~~y~i~~~~~~ 294 (503)
|||.|+|++.+|... .|...|++.+.+ |+.+.+.++++++ | .+.++++...
T Consensus 402 HGh~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnP-G-~W~~HCHi~~ 457 (495)
T 3t6v_A 402 HGHDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNP-G-PWFLHCHIDW 457 (495)
T ss_dssp TTCCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCSC-E-EEEEEESCHH
T ss_pred cCCcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCCC-e-eEEEEecchh
Confidence 999999999888653 588899999997 9999999999964 6 5667787653
No 52
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.47 E-value=4.7e-12 Score=134.00 Aligned_cols=231 Identities=12% Similarity=0.104 Sum_probs=149.9
Q ss_pred eEEEEEcCCCCCceEEEecCCEEEEEEEeCCC-CCeeEEEccCCCCCCCCCCCCCC-----CCCCCCCCCceEEEEEeCC
Q 010700 46 QQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNWTYQFQVKD 119 (503)
Q Consensus 46 ~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DG~~~-----~q~~i~PG~~~~y~f~~~~ 119 (503)
...+++||+. .|+|+|++|+++|+||.|... ....+|++|..+.. .+.||.+. ....|.|||+++..+++.+
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEE-EeccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4678999996 699999999999999999965 56789999976654 67899763 3456999999999999953
Q ss_pred C-ceeeEEccCchhhhh------cCceeeEEE-EeCCC-CCCCC--C---C----------------CCCceEEEEeeee
Q 010700 120 Q-VGSFFYFPSLHFQRA------SGGFGGFII-NNRAI-IPIPF--D---T----------------PDGDITILIGDWY 169 (503)
Q Consensus 120 ~-~Gt~wyH~H~~~q~~------~Gl~G~liV-~~~~~-~~~~~--~---~----------------~d~e~~l~l~d~~ 169 (503)
+ .|.||.......... ....+..|+ ..... .+.+. . . ...+..+.+.--
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~- 323 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVV- 323 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEE-
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEE-
Confidence 3 578999876432110 011222222 22111 01000 0 0 000111111000
Q ss_pred eCCHHHHHHHhhcCCCCCCCCeEEECCcCCCCCCCC-----C-------CC--CCCCceeEEEeCCcEEEEEEeEeCCCC
Q 010700 170 TRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTT-----L-------VP--DGIDYETIEVHPGKTYRIRVHNVGIST 235 (503)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~-----~-------~~--~~~~~~~~~v~~G~~~rlRliN~g~~~ 235 (503)
. .. .......++|||+.+..-... . .+ .......+.++.|++++|.|.|.+..
T Consensus 324 ~----------~~--~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~- 390 (534)
T 1zpu_A 324 M----------DN--LKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTG- 390 (534)
T ss_dssp E----------EE--CTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSSS-
T ss_pred e----------ec--cCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCCC-
Confidence 0 00 001123688999986321000 0 00 00113568999999999999998755
Q ss_pred eeeEEEeCCcEEEEEecCC-----------c---------cceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeec
Q 010700 236 SLNFRIQNHNLLLAETEGS-----------Y---------TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (503)
Q Consensus 236 ~~~~~i~gh~~~via~DG~-----------~---------~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~ 294 (503)
.|+||||||.|+|++.++. + ..|...|+|.+.||+.+.+.+++++ +| .|.++++...
T Consensus 391 ~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDN-PG-~W~~HCHi~~ 467 (534)
T 1zpu_A 391 THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADN-PG-VWFFHCHIEW 467 (534)
T ss_dssp CEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCS-CE-EEEEEECCHH
T ss_pred CCCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeCC-Ce-eEEEEeCchh
Confidence 8999999999999998853 1 2367899999999999999999986 46 6777887653
No 53
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.45 E-value=1.6e-12 Score=134.73 Aligned_cols=231 Identities=11% Similarity=0.034 Sum_probs=151.3
Q ss_pred EEEEEEEEEEEeCC-------------CCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCC-CCeeEEE--cc---CC
Q 010700 28 VYFDFEVSYITASP-------------LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHW--SG---IQ 88 (503)
Q Consensus 28 ~~~~l~i~~~~~~~-------------dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~-~~~siH~--HG---~~ 88 (503)
+++.|.++.-.... .|.....+++||+. .|.|+|++| ++|+||.|... ....+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56666666554332 12345679999997 599999999 99999999965 5688999 87 54
Q ss_pred CCCCCCCCCCCC------CCCCCCCCCceEEEEEeCCCceeeEEccCchhhhh------------cC-ceee--EEEEeC
Q 010700 89 QRRSSWQDGLLG------TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRA------------SG-GFGG--FIINNR 147 (503)
Q Consensus 89 ~~~~~~~DG~~~------~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~------------~G-l~G~--liV~~~ 147 (503)
+.. .+.||.+. ....|.|||+++..+++. .+.||..++...... .+ .... |.+...
T Consensus 216 ~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MRL-IAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EEE-EEeCCCccCCceEeceEEECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 433 57899752 345689999999999994 478898876321100 00 1111 222221
Q ss_pred CCCCCCC-----C----CCCCceEEEEeeeeeCCHHHHHHHhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEE-
Q 010700 148 AIIPIPF-----D----TPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIE- 217 (503)
Q Consensus 148 ~~~~~~~-----~----~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~- 217 (503)
...+.|. + ....+..+.|.. + ...|.|||+.+.. ..+.+.
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l~~---------------~-----~~~~~iNg~~~~~----------~~p~~~~ 342 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFALSL---------------S-----GMQWTINGMFWNA----------SNPLFEH 342 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEEEE---------------E-----TTEEEETTBCCCT----------TCTTCCC
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEEeC---------------C-----CceeeECCCcCCC----------CCCceec
Confidence 1100000 0 011112222210 0 1258999998731 234566
Q ss_pred EeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCcc---------------ceeeecEEEEcCCceEEEEEEeCCC-
Q 010700 218 VHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT---------------VQQNYTSLDIHVGQSYSFLVTMDQN- 281 (503)
Q Consensus 218 v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~---------------~p~~~d~v~l~pGeR~dvlv~~~~~- 281 (503)
++.|++++|+|.|.+....|+||||||.|+|++.+|... ++...|++.+.||+++.+.+++...
T Consensus 343 ~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~ 422 (448)
T 3aw5_A 343 VSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKK 422 (448)
T ss_dssp EEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGG
T ss_pred cCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccC
Confidence 899999999999988344899999999999999999764 2357899999999999999777511
Q ss_pred CCcceEEEEeee
Q 010700 282 ASTDYYIVASAR 293 (503)
Q Consensus 282 ~g~~y~i~~~~~ 293 (503)
+..-|.++|+..
T Consensus 423 adnpw~~HCHil 434 (448)
T 3aw5_A 423 RGQLFPFHCHNL 434 (448)
T ss_dssp TTCEEEEEESSH
T ss_pred CCCcEEEEcCCh
Confidence 111255667654
No 54
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.45 E-value=2.9e-12 Score=136.47 Aligned_cols=217 Identities=10% Similarity=0.061 Sum_probs=139.1
Q ss_pred eEEEecCCEEEEEEEeCCC-CCeeEEEccCCCCCCCCCCCCCC-----CCCCCCCCCceEEEEEe-CCCceeeEEccCch
Q 010700 59 TINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNWTYQFQV-KDQVGSFFYFPSLH 131 (503)
Q Consensus 59 ~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DG~~~-----~q~~i~PG~~~~y~f~~-~~~~Gt~wyH~H~~ 131 (503)
.|+|++|+++++||.|... ....+|++|..+.. .+.||.+. ....|.|||+++..+++ .+.+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999965 56789999986654 57899752 34669999999999998 34489999998854
Q ss_pred hhhhcCc--eeeEEEEeCCC--CC---CC-CCC--------------------------CCCceEEEEeeeeeCCHHHHH
Q 010700 132 FQRASGG--FGGFIINNRAI--IP---IP-FDT--------------------------PDGDITILIGDWYTRNHTALR 177 (503)
Q Consensus 132 ~q~~~Gl--~G~liV~~~~~--~~---~~-~~~--------------------------~d~e~~l~l~d~~~~~~~~~~ 177 (503)
.-..... .+.|-...... .+ .| .+. .++.+.+.+..-
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~--------- 354 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQN--------- 354 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEE---------
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEEEEEeec---------
Confidence 2101112 22222222111 00 00 000 000111111000
Q ss_pred HHhhcCCCCCCCCeEEECCcCCCCCCCC----------------C------------CCCC-----CCceeEEEeCCcEE
Q 010700 178 KTLDAGKGLGMPDGVLINGKGPYQYNTT----------------L------------VPDG-----IDYETIEVHPGKTY 224 (503)
Q Consensus 178 ~~~~~~~~~~~~~~~liNG~~~~~~~~~----------------~------------~~~~-----~~~~~~~v~~G~~~ 224 (503)
.......|.|||+.+...... . .+.. .....+.++.|+++
T Consensus 355 -------~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v 427 (552)
T 1aoz_A 355 -------VINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVV 427 (552)
T ss_dssp -------EETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEE
T ss_pred -------cCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEE
Confidence 000012478888865221000 0 0000 01245889999999
Q ss_pred EEEEeEeCCC-----CeeeEEEeCCcEEEEEe-cCCc----------cceeeecEEEEcCCceEEEEEEeCCCCCcceEE
Q 010700 225 RIRVHNVGIS-----TSLNFRIQNHNLLLAET-EGSY----------TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYI 288 (503)
Q Consensus 225 rlRliN~g~~-----~~~~~~i~gh~~~via~-DG~~----------~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i 288 (503)
+|.|.|.+.+ ..|+||||||.|+|++. +|.+ .+|...|++.+.+|+.+.+.++++++ | .+.+
T Consensus 428 ~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNP-G-~W~~ 505 (552)
T 1aoz_A 428 DVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNP-G-VWAF 505 (552)
T ss_dssp EEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSC-E-EEEE
T ss_pred EEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCCC-e-EEEE
Confidence 9999998753 36999999999999998 4653 24778999999999999999999964 6 6667
Q ss_pred EEeeec
Q 010700 289 VASARF 294 (503)
Q Consensus 289 ~~~~~~ 294 (503)
+++...
T Consensus 506 HCHi~~ 511 (552)
T 1aoz_A 506 HCHIEP 511 (552)
T ss_dssp EESSHH
T ss_pred Eeeehh
Confidence 787654
No 55
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.44 E-value=3.1e-13 Score=132.56 Aligned_cols=185 Identities=9% Similarity=0.007 Sum_probs=116.8
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCC------------
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQ------------ 280 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~------------ 280 (503)
.|+|+++.|++++++|.|.... ..++|.||..+. -+.||.++. .-.|.|||++...+++++
T Consensus 57 GP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~ 129 (299)
T 3t9w_A 57 GPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAEG 129 (299)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CceEEEECCeEEEEEEEECCCC-CccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCCC
Confidence 5999999999999999998765 788999998654 357887642 124789999999888763
Q ss_pred CCCcceEEEEeeecccccc-CCCcceEEEEEecCCCCCCCCCCCCCCCCCCCccccccccccccccCCCCCCCCCCCCCC
Q 010700 281 NASTDYYIVASARFVNESQ-WKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSF 359 (503)
Q Consensus 281 ~~g~~y~i~~~~~~~~~~~-~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 359 (503)
..| .||............ .......|.|...... .+
T Consensus 130 ~~g-t~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~---------~~--------------------------------- 166 (299)
T 3t9w_A 130 TAG-YWHYHDHAMGTEHGTEGVLKGLYGALVVRRQG---------DL--------------------------------- 166 (299)
T ss_dssp CCE-EEEEECSSSSSTTCHHHHHHTCEEEEEEECTT---------CC---------------------------------
T ss_pred Cce-eEEEecCCcccccchhhhcccccceEEEeccc---------cc---------------------------------
Confidence 235 777766543211100 0001112222221110 00
Q ss_pred CcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhccccccccCccccCCCCCCCCCCCCcceEEEecCCCcE
Q 010700 360 RYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGF 439 (503)
Q Consensus 360 ~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 439 (503)
..++.+.+.. ..|.+|++.+. + ...+.++.|++
T Consensus 167 -----~~d~e~~l~~---------~~~~~Ng~~~~--~-------------------------------~p~l~v~~Ge~ 199 (299)
T 3t9w_A 167 -----LPKRQFTVVF---------NDMMINNRAHH--D-------------------------------APTFEANLGER 199 (299)
T ss_dssp -----CCSEEEEEEE---------ETTEETTCCTT--C-------------------------------CCEEEEETTCE
T ss_pred -----Cccccceeee---------eeeeecCcccc--c-------------------------------cccceecCCCE
Confidence 0112222221 12678887652 1 12345678999
Q ss_pred EEEEEeCCCCCCCceeecCCceEEEeeccCCCCCCCCCCCCCCCCCccceEEeCCC---CcccCcc
Q 010700 440 MEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQARRH---LCSNRNY 502 (503)
Q Consensus 440 vdivi~N~~~~~HP~HLHGh~F~Vl~~g~g~~~~~~~~~~n~~~p~~RDTv~v~~~---g~~~~~~ 502 (503)
|+|.|.|.+...||||||||.|+|+..+.... ....+.++||+.|.|+ ++..|+|
T Consensus 200 Vr~~liN~~~~~HpfHlHGh~F~v~~~g~~~~--------~~~~~~~~Dtv~v~PGe~~~~~via~ 257 (299)
T 3t9w_A 200 VEWIAIGHGSNFHTFHLHGHRWLDNRTGMRTS--------EYDPSPLIDIKDLNPGVSFGFQVIAG 257 (299)
T ss_dssp EEEEEEEESSCCCEEEETTCCEESSSSSSCCS--------TTCCCCEESEEECCTTCEEEEEEETT
T ss_pred EEEEEEeccccceeeeEecceEEEEecccccC--------CcCCCCceeeEEeCCceeEEEEEEEe
Confidence 99999999989999999999999988754422 2234568999999886 4555544
No 56
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.44 E-value=3.4e-12 Score=133.53 Aligned_cols=243 Identities=11% Similarity=0.063 Sum_probs=150.5
Q ss_pred eeEEEEEcCCC--------CCceEEEecCCEEEEEEEeCCC-CCeeEEEccCCCCCCCCCCCCCC-----CCCCCCCCCc
Q 010700 45 PQQVIAINGKF--------PGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWN 110 (503)
Q Consensus 45 ~~~~~~~Ng~~--------pgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DG~~~-----~q~~i~PG~~ 110 (503)
....++|||+- +-|.|+|++|+++++||.|... ....+|++|..+.. .+.||.+. ....|.|||+
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcE
Confidence 35679999973 3479999999999999999864 56899999987654 67899763 2356999999
Q ss_pred eEEEEEeCCCceeeEEccCch--hh-hhcCceeeEEEEeCCCCCCCCCCCCCceEEEEeeeeeCCHHHHHHHhhcCCC-C
Q 010700 111 WTYQFQVKDQVGSFFYFPSLH--FQ-RASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKG-L 186 (503)
Q Consensus 111 ~~y~f~~~~~~Gt~wyH~H~~--~q-~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~-~ 186 (503)
++..+++.+..|.||..+... .+ ...|..-+++.........|........ ..+.+........ ....+.. .
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~---~~~p~~~~~ 319 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVS---TPVPGAPSS 319 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSC---CCCSSCSST
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-ccccccccccccc---ccCCCcccC
Confidence 999999964569999987632 11 1122222333333221111110000000 0000000000000 0000000 0
Q ss_pred ------------CCCCeEEECCcCCCCCCCC-----CCC------CCCCceeEEEeCCcEEEEEEeEe--CCCCeeeEEE
Q 010700 187 ------------GMPDGVLINGKGPYQYNTT-----LVP------DGIDYETIEVHPGKTYRIRVHNV--GISTSLNFRI 241 (503)
Q Consensus 187 ------------~~~~~~liNG~~~~~~~~~-----~~~------~~~~~~~~~v~~G~~~rlRliN~--g~~~~~~~~i 241 (503)
.....|.|||+.+..-... ..+ .......+.++.|++++|.|.|. .....|+||+
T Consensus 320 ~~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HL 399 (499)
T 3pxl_A 320 GGVDKAINMAFNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHL 399 (499)
T ss_dssp TCSSEEEECCEEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEE
T ss_pred CCCcEEEEEEEEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCcccee
Confidence 0123688999987421000 000 01123678999999999999842 2234799999
Q ss_pred eCCcEEEEEecCCcc----ceeeecEEEEcC---CceEEEEEEeCCCCCcceEEEEeeec
Q 010700 242 QNHNLLLAETEGSYT----VQQNYTSLDIHV---GQSYSFLVTMDQNASTDYYIVASARF 294 (503)
Q Consensus 242 ~gh~~~via~DG~~~----~p~~~d~v~l~p---GeR~dvlv~~~~~~g~~y~i~~~~~~ 294 (503)
|||.|+|++.+|... .|...|++.+.+ |+.+.+.++++++ | .+.++++...
T Consensus 400 HGh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnP-G-~W~~HCHi~~ 457 (499)
T 3pxl_A 400 HGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNP-G-PWFLHCHIDF 457 (499)
T ss_dssp TTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSC-E-EEEEEESSHH
T ss_pred cCCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCCC-c-eEEEEeCChh
Confidence 999999999887543 588899999986 9999999999964 6 5667777653
No 57
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.44 E-value=4.6e-13 Score=111.64 Aligned_cols=105 Identities=22% Similarity=0.156 Sum_probs=78.9
Q ss_pred EEEEEEEEEEEe-----CCCCceeEE-EEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCC
Q 010700 28 VYFDFEVSYITA-----SPLGVPQQV-IAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGT 101 (503)
Q Consensus 28 ~~~~l~i~~~~~-----~~dG~~~~~-~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~ 101 (503)
++|.+.+.+.+. ..+|..... ..+|++|+++.|++++||+|+++++|.....+++++.+. |.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPISEGFSIDAF---------GV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSSCEEEEEGGG---------TE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCCeEEEEEcCC---------Cc---
Confidence 356666666553 335665555 489999999999999999999999999766444433322 21
Q ss_pred CCCCCCCCceEEEEEeCCCceeeEEccCchhhhhcCceeeEEEEe
Q 010700 102 NCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146 (503)
Q Consensus 102 q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~ 146 (503)
+..+.||++++|.|++ +++|+||||||...... +|.|.|+|.+
T Consensus 70 ~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~-~M~g~i~V~~ 112 (112)
T 1iby_A 70 QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNI-HLPGTLNVVE 112 (112)
T ss_dssp EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTT-BCCEEEEEEC
T ss_pred eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchH-HCEEEEEEeC
Confidence 3568999999999998 68999999999765433 3999999974
No 58
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.44 E-value=4.5e-12 Score=135.26 Aligned_cols=232 Identities=10% Similarity=0.004 Sum_probs=147.5
Q ss_pred eeEEEEEcCCCCCceEEEecCCEEEEEEEeCCC-CCeeEEEccC-------CCCCCCCCCCCCC------C------CCC
Q 010700 45 PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGI-------QQRRSSWQDGLLG------T------NCP 104 (503)
Q Consensus 45 ~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~-------~~~~~~~~DG~~~------~------q~~ 104 (503)
....++|||+. .|.|.|++| ++|+||.|... +...+++.|. .+. -.+.||.+. . ...
T Consensus 253 ~gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~-vIa~DG~~l~~P~~~~~~~~~~~l~ 329 (612)
T 2g23_A 253 FGPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVH-QIGSDGGLLPRPVPVDFDDTLPVLS 329 (612)
T ss_dssp CCSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEE-EEEETTEEEEEEEEECSSSSSSSEE
T ss_pred cCCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEE-EEEeCCeEccCCEEecccCcccEEE
Confidence 34678999996 699999999 99999999964 6778888775 222 257899652 2 456
Q ss_pred CCCCCceEEEEEeCCCcee-eEEccCchhhh------hc----CceeeEEEEeCCC-C--CCCCC------CCCCc----
Q 010700 105 IPPKWNWTYQFQVKDQVGS-FFYFPSLHFQR------AS----GGFGGFIINNRAI-I--PIPFD------TPDGD---- 160 (503)
Q Consensus 105 i~PG~~~~y~f~~~~~~Gt-~wyH~H~~~q~------~~----Gl~G~liV~~~~~-~--~~~~~------~~d~e---- 160 (503)
|.|||+++..+++.+.+|+ ++...-..... .+ +..--|.|..+.. . ..|.. ....+
T Consensus 330 l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~ 409 (612)
T 2g23_A 330 AAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHG 409 (612)
T ss_dssp ECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCE
T ss_pred ECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccc
Confidence 8999999999999654674 65554321110 00 1122255554321 1 11110 00001
Q ss_pred -eEEEEe------------eeeeCC---HHHHHHHhh-cC-----CCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEE
Q 010700 161 -ITILIG------------DWYTRN---HTALRKTLD-AG-----KGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEV 218 (503)
Q Consensus 161 -~~l~l~------------d~~~~~---~~~~~~~~~-~~-----~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v 218 (503)
..+++. -|.... ...+ .+. .+ ...+....+.|||+.+ .+.+.+++
T Consensus 410 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~iNG~~~-----------~~~~~~~v 476 (612)
T 2g23_A 410 HRLIVLTPPGTKGSGGHPEIWEMAEVEDPADV--QVPAEGVIQVTGADGRTKTYRRTAATF-----------NDGLGFTI 476 (612)
T ss_dssp EEEEEECCTTCTTSTTCCCEEEEEEEC-------CCSCTTEEEEECTTSCEEEEEEEECST-----------TSCCCEEE
T ss_pred eeEEeeccccccccccccceeecccccccccc--ccccccceeeeccCCceeEEEECCccC-----------CCCCceEe
Confidence 122221 011100 0000 000 00 0001123688999987 23588999
Q ss_pred eCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCC------------------------cc---ceeeecEEEEcCCce
Q 010700 219 HPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGS------------------------YT---VQQNYTSLDIHVGQS 271 (503)
Q Consensus 219 ~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~------------------------~~---~p~~~d~v~l~pGeR 271 (503)
+.|++++|+|+|.+.. .|+||||||.|+|++.+|. .+ ++...|+|.+.||++
T Consensus 477 ~~G~~v~w~l~N~~~~-~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~ 555 (612)
T 2g23_A 477 GEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQG 555 (612)
T ss_dssp ETTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEE
T ss_pred cCCCEEEEEEEeCCCC-CCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcE
Confidence 9999999999999855 8999999999999987532 11 233789999999999
Q ss_pred EEEEEEeCCCCCcceEEEEeeec
Q 010700 272 YSFLVTMDQNASTDYYIVASARF 294 (503)
Q Consensus 272 ~dvlv~~~~~~g~~y~i~~~~~~ 294 (503)
+.+.++++..+| .|.++|+...
T Consensus 556 ~~i~~~~~~~pG-~w~~HCHil~ 577 (612)
T 2g23_A 556 LRVMGKFDGAYG-RFMYHCHLLE 577 (612)
T ss_dssp EEEEEECCSCCE-EEEEEESSHH
T ss_pred EEEEEEeCCCCc-cEEEEeCchh
Confidence 999999995567 7888887653
No 59
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.43 E-value=3.5e-13 Score=118.56 Aligned_cols=98 Identities=17% Similarity=0.276 Sum_probs=71.3
Q ss_pred CceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCC------CCC--CCCCCCCCC--ceE
Q 010700 43 GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDG------LLG--TNCPIPPKW--NWT 112 (503)
Q Consensus 43 G~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG------~~~--~q~~i~PG~--~~~ 112 (503)
|...+-+.++|. ++|+|+|++||+|+++++|... ...|.+.+...+..+.+. .+. ....|.||+ +++
T Consensus 47 ~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 47 GFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp TSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEE
Confidence 444444566666 5799999999999999999732 335655554433332221 000 012789999 999
Q ss_pred EEEEeCCCceeeEEccCchhhhhcCceeeEEEE
Q 010700 113 YQFQVKDQVGSFFYFPSLHFQRASGGFGGFIIN 145 (503)
Q Consensus 113 y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~ 145 (503)
|.|++ ++|+||||||...|..+||+|.|+|+
T Consensus 124 ~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 124 FTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 99997 79999999999889999999999985
No 60
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.41 E-value=2.7e-11 Score=128.98 Aligned_cols=246 Identities=7% Similarity=0.004 Sum_probs=148.4
Q ss_pred eEEEEEcCCCC--------CceEEEecCCEEEEEEEeCCC-CCeeEEEccCCCCCCCCCCCCCC-----CCCCCCCCCce
Q 010700 46 QQVIAINGKFP--------GPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNW 111 (503)
Q Consensus 46 ~~~~~~Ng~~p--------gP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DG~~~-----~q~~i~PG~~~ 111 (503)
...++|||+.. -|.|++++|+++|+||.|... ....+|++|..+.. .+.||.+. ....|.|||++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEE
Confidence 45789999863 369999999999999999965 46789999986554 57899763 34569999999
Q ss_pred EEEEEeCCCceeeEEccCc--hhhh--hcCce-eeEEEEeCCCCCCCC----CCCC----CceEE-EEeeeeeCCH---H
Q 010700 112 TYQFQVKDQVGSFFYFPSL--HFQR--ASGGF-GGFIINNRAIIPIPF----DTPD----GDITI-LIGDWYTRNH---T 174 (503)
Q Consensus 112 ~y~f~~~~~~Gt~wyH~H~--~~q~--~~Gl~-G~liV~~~~~~~~~~----~~~d----~e~~l-~l~d~~~~~~---~ 174 (503)
+..+++.+.+|.||..... .... ..... .+++.........|. ...+ .+..+ -+........ .
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~ 353 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVK 353 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCccccc
Confidence 9999996557899988765 2110 11111 122222211111110 0000 00000 0000000000 0
Q ss_pred --HHHHHhhcCCCCCCCCeEEECCcCCCCCCCCC------CCC---CCCceeEEEeCCcEEEEEEeEeCC----CCeeeE
Q 010700 175 --ALRKTLDAGKGLGMPDGVLINGKGPYQYNTTL------VPD---GIDYETIEVHPGKTYRIRVHNVGI----STSLNF 239 (503)
Q Consensus 175 --~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~------~~~---~~~~~~~~v~~G~~~rlRliN~g~----~~~~~~ 239 (503)
.+...+...........+.|||+.+....... .+. ......+.++.++.+++.++|... ...|+|
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~ 433 (559)
T 2q9o_A 354 RPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPM 433 (559)
T ss_dssp CGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEE
T ss_pred ceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcE
Confidence 00000000000112347999999873211110 000 011245788888788877777754 458999
Q ss_pred EEeCCcEEEEEecC---------Cc------------cceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeec
Q 010700 240 RIQNHNLLLAETEG---------SY------------TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (503)
Q Consensus 240 ~i~gh~~~via~DG---------~~------------~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~ 294 (503)
|||||.|+|++.++ +. ..|...|+|.+.+|+++.+.+++++ +| .|.++++...
T Consensus 434 HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adN-PG-~W~~HCHil~ 507 (559)
T 2q9o_A 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDN-PG-AWLFHCHIAW 507 (559)
T ss_dssp EESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCS-CE-EEEEEECCHH
T ss_pred EECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCC-Ce-eEEEEecchh
Confidence 99999999999986 22 1367899999999999999999986 46 6777887754
No 61
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.40 E-value=1.3e-12 Score=129.87 Aligned_cols=213 Identities=15% Similarity=0.099 Sum_probs=129.2
Q ss_pred CeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCC-CeeeEEEeCCcEEEEEecCCccceeeecEEEEcC
Q 010700 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHV 268 (503)
Q Consensus 190 ~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~p 268 (503)
..|++||+.. .|+|++++|++++||++|.... ..+.+|+||.. +.||... ...|.|
T Consensus 59 ~~~~~ng~~p-------------gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~P 115 (327)
T 1kbv_A 59 RYWTFDGDVP-------------GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAP 115 (327)
T ss_dssp EEEEETTBSS-------------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCT
T ss_pred EEEEECCccC-------------CCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecC
Confidence 5799999864 3899999999999999999753 47889998863 5788652 124899
Q ss_pred CceEEEEEEeCCCCCcceEEEEeeecc-ccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCccccccccccccccCC
Q 010700 269 GQSYSFLVTMDQNASTDYYIVASARFV-NESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVS 347 (503)
Q Consensus 269 GeR~dvlv~~~~~~g~~y~i~~~~~~~-~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~ 347 (503)
||++++.+++++ +| .||.+++.... .+. ...+.+ +++.+... ++| .. +....+- .-++...
T Consensus 116 G~~~~y~f~~~~-~G-t~wyH~h~~~~~~~~-~~Gl~G-~~iV~~~~------~~p---~~--d~e~~l~---~~d~~~~ 177 (327)
T 1kbv_A 116 GRTSTFSFKALQ-PG-LYIYHCAVAPVGMHI-ANGMYG-LILVEPKE------GLP---KV--DKEFYIV---QGDFYTK 177 (327)
T ss_dssp TEEEEEEEECCS-CE-EEEEECCCSSHHHHH-HTTCEE-EEEEECTT------CCC---CC--SEEEEEE---EEEECBS
T ss_pred CCEEEEEEECCC-Ce-EEEEEeCCCChhhhh-hcceEE-EEEEecCC------CCC---CC--ceEEEEE---eeeeecc
Confidence 999999999986 57 89999875321 110 111222 34444311 111 11 1111110 0011111
Q ss_pred CCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhccccccccCccccCCCCCCCCCCCCc
Q 010700 348 ASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRM 427 (503)
Q Consensus 348 ~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~~~~~~~~~~~~~~~~~p~~~~~~~ 427 (503)
.. ...+ +.... .+.... .. ....+.|||+.+...
T Consensus 178 ~~--~~~~------g~~~~----~~~~~~--~~-~~~~~~iNG~~~~~~------------------------------- 211 (327)
T 1kbv_A 178 GK--KGAQ------GLQPF----DMDKAV--AE-QPEYVVFNGHVGALT------------------------------- 211 (327)
T ss_dssp SC--TTCC------EEECB----CHHHHH--HT-CCSEEEETTSTTTTS-------------------------------
T ss_pred Cc--cccc------ccccc----ChhHhc--cC-CCceEEEcCcccCCC-------------------------------
Confidence 00 0000 00000 000000 01 123578999876320
Q ss_pred ceEEEecCCCcEEEEEEeCCCC-CCCceeecCCceEEEeeccCCCCCCCCCCCCCCCCCccceEEeCCCCcccC
Q 010700 428 ETSVINGTYRGFMEVILQNNDT-KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQARRHLCSNR 500 (503)
Q Consensus 428 ~~~~~~~~~g~~vdivi~N~~~-~~HP~HLHGh~F~Vl~~g~g~~~~~~~~~~n~~~p~~RDTv~v~~~g~~~~ 500 (503)
....+.++.|+++.|.|.|.+. ..|+||||||.|+||+..++. ..|.++||+.|.++.-..+
T Consensus 212 ~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~-----------~~p~~~d~l~l~pGer~dv 274 (327)
T 1kbv_A 212 GDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGK-----------LINENVQSTIVPAGGSAIV 274 (327)
T ss_dssp GGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSS-----------CEECSBSEEEECTTEEEEE
T ss_pred CceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCc-----------CCCCceeEEEECCCCEEEE
Confidence 0123466789999999999864 689999999999999986552 2367899999988775444
No 62
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.34 E-value=9.3e-12 Score=131.30 Aligned_cols=219 Identities=14% Similarity=0.025 Sum_probs=141.0
Q ss_pred eeEEEEEcCCCCCceEEEecCCEEEEEEEeCCC-CCeeEEEccC-CCCCCCCCCCCC----C--CCCCCCCCCceEEEEE
Q 010700 45 PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGI-QQRRSSWQDGLL----G--TNCPIPPKWNWTYQFQ 116 (503)
Q Consensus 45 ~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~-~~~~~~~~DG~~----~--~q~~i~PG~~~~y~f~ 116 (503)
....++|||+. .|.|.++.| ++|+||.|... ....+|++|. .+.. .+.||.+ . ....|.|||+++..++
T Consensus 229 ~~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 305 (513)
T 2wsd_A 229 CGETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQ-IGSDGGLLPRSVKLNSFSLAPAERYDIIID 305 (513)
T ss_dssp CCSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred ccceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEE-EccCCCcccCceEeCeEEECCeeeEEEEEE
Confidence 34679999997 699999885 99999999965 4678999887 4433 6789953 2 3456899999999999
Q ss_pred eCCCceeeEE-ccCch--hhhhcCc-eeeEEEEeCC--C----CCCCCCC----------CCCceEEEEeeeeeCCHHHH
Q 010700 117 VKDQVGSFFY-FPSLH--FQRASGG-FGGFIINNRA--I----IPIPFDT----------PDGDITILIGDWYTRNHTAL 176 (503)
Q Consensus 117 ~~~~~Gt~wy-H~H~~--~q~~~Gl-~G~liV~~~~--~----~~~~~~~----------~d~e~~l~l~d~~~~~~~~~ 176 (503)
+.+.+|.++. .+-.. .....+. ...+-+.... . ...|... .+.+..+.|....
T Consensus 306 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~~------- 378 (513)
T 2wsd_A 306 FTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGTQ------- 378 (513)
T ss_dssp CGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEEE-------
T ss_pred CCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEeec-------
Confidence 9644676333 21110 0000011 1222222111 0 0011000 0011112221110
Q ss_pred HHHhhcCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCC--
Q 010700 177 RKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGS-- 254 (503)
Q Consensus 177 ~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~-- 254 (503)
+. .....++|||+.+. +...+.++.|++++|.|+|.+.. .|+||||||.|+|++.+|.
T Consensus 379 ----~~----~g~~~~~iNg~~~~-----------~~~~~~~~~g~~~~w~l~N~~~~-~HP~HlHG~~F~Vl~~~~~~~ 438 (513)
T 2wsd_A 379 ----DE----YGRPVLLLNNKRWH-----------DPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDI 438 (513)
T ss_dssp ----CT----TSCEEEEETTBCTT-----------SCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCH
T ss_pred ----CC----CCCceEeECCccCC-----------CcccEecCCCCEEEEEEEcCCCC-CcCEeEeCceEEEEEecCccc
Confidence 00 01125789999872 23456899999999999998865 8999999999999998752
Q ss_pred -------------c------cceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeec
Q 010700 255 -------------Y------TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (503)
Q Consensus 255 -------------~------~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~ 294 (503)
. -++...|++.|.||+++.+.+++++.+| .|.++++...
T Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG-~w~~HCHil~ 496 (513)
T 2wsd_A 439 ARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSG-RYVWHCHALE 496 (513)
T ss_dssp HHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCE-EEEEEESCHH
T ss_pred ccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCC-CEEEEcCChh
Confidence 1 0234789999999999999999964567 7878887653
No 63
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.33 E-value=1.1e-11 Score=130.87 Aligned_cols=231 Identities=13% Similarity=-0.004 Sum_probs=140.5
Q ss_pred eeEEEEEcCCCCCceEEEecCCEEEEEEEeCCC-CCeeEEEcc-------CCCCCCCCCCCCC----C--CCCCCCCCCc
Q 010700 45 PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSG-------IQQRRSSWQDGLL----G--TNCPIPPKWN 110 (503)
Q Consensus 45 ~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG-------~~~~~~~~~DG~~----~--~q~~i~PG~~ 110 (503)
....+++||+. .|.|.++.| ++|+||.|... ....++++| ..+. -.+.||.. . ....|.|||+
T Consensus 200 ~gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~-vIa~DG~~~~~P~~~~~l~l~pgeR 276 (534)
T 3abg_A 200 WGDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFK-VIASDSGLLEHPADTSLLYISMAER 276 (534)
T ss_dssp CCSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEE-EEEETTEEEEEEEEESCEEECTTCE
T ss_pred cCceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEE-EEEeCCCcccCceEeceEEECCccE
Confidence 35679999995 699999885 99999999965 567899976 3332 25789852 2 4566999999
Q ss_pred eEEEEEeCCCce-eeEEccCchhhhhc-------CceeeEEEEeCCCCCCCCCCCCCceEEEEeeee-eCCHHHHHHHhh
Q 010700 111 WTYQFQVKDQVG-SFFYFPSLHFQRAS-------GGFGGFIINNRAIIPIPFDTPDGDITILIGDWY-TRNHTALRKTLD 181 (503)
Q Consensus 111 ~~y~f~~~~~~G-t~wyH~H~~~q~~~-------Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~-~~~~~~~~~~~~ 181 (503)
++..+++.+.+| +||........... ...+.+-+........+. ....+..+.... ..........+.
T Consensus 277 ~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~---~~~~P~~L~~~~~p~~~~~~~~~~~ 353 (534)
T 3abg_A 277 YEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD---TSVVPANLRDVPFPSPTTNTPRQFR 353 (534)
T ss_dssp EEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC---CCCCCCCCCCCSCCCCCCCCCEEEE
T ss_pred EEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC---CCCCccccccCCCCCCccccceEEE
Confidence 999999864467 58776532100000 011222222111100000 000000000000 000000000000
Q ss_pred cCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEe-cCC---cc-
Q 010700 182 AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAET-EGS---YT- 256 (503)
Q Consensus 182 ~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~-DG~---~~- 256 (503)
.. .....|+|||+.+... .....+.++.|++++|.|.|.+....|+||||||.|+|++. +|. ..
T Consensus 354 ~~---~~~~~w~iNG~~f~~~--------~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~ 422 (534)
T 3abg_A 354 FG---RTGPTWTINGVAFADV--------QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVM 422 (534)
T ss_dssp CS---CCCSTTCCCCBTTBCT--------TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCC
T ss_pred Ee---ccCceeEECCcccCCC--------CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCC
Confidence 00 0123578999987210 11234679999999999999886558999999999999998 663 11
Q ss_pred --ceeeecEEEEcCCceEEEEEE-eCCCCCcceEEEEeeec
Q 010700 257 --VQQNYTSLDIHVGQSYSFLVT-MDQNASTDYYIVASARF 294 (503)
Q Consensus 257 --~p~~~d~v~l~pGeR~dvlv~-~~~~~g~~y~i~~~~~~ 294 (503)
+....|+|.+.||+++.+.++ ++ .+| .|.++|+...
T Consensus 423 ~~~~~~rDTV~v~pg~~v~I~~~~ad-npG-~w~~HCHil~ 461 (534)
T 3abg_A 423 PYESGLKDVVWLGRRETVVVEAHYAP-FPG-VYMFHCHNLI 461 (534)
T ss_dssp SGGGSCBSEECCCSSEEEEEEEECCS-CCE-EEEEEESCHH
T ss_pred ccccCCcCeEEcCCCCEEEEEEEECC-CCc-cEEEecChHH
Confidence 125689999999999999998 55 457 7888888754
No 64
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.30 E-value=4.8e-12 Score=133.12 Aligned_cols=94 Identities=15% Similarity=0.199 Sum_probs=73.8
Q ss_pred CCceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCC---CeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeC
Q 010700 42 LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE---SLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVK 118 (503)
Q Consensus 42 dG~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~---~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~ 118 (503)
++.+..++++|++|++|.|++++||+|+++|+|.... .++++.++. |+ ...|.||++++|.|++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~---------gv---~~~i~PG~t~t~~Fta- 563 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNY---------GV---AMEIGPQMTSSVTFVA- 563 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTT---------TE---EEEECTTCEEEEEEEC-
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCceeeEEecCC---------Cc---ceeeCCCCeEEEEEEC-
Confidence 5678889999999999999999999999999998653 344444332 22 2568999999999998
Q ss_pred CCceeeEEccCch-hhhhcCceeeEEEEeCC
Q 010700 119 DQVGSFFYFPSLH-FQRASGGFGGFIINNRA 148 (503)
Q Consensus 119 ~~~Gt~wyH~H~~-~q~~~Gl~G~liV~~~~ 148 (503)
+++|+||||||.- .....||.|.|+|++++
T Consensus 564 ~~pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 564 ANPGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CSCEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CCCEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 6899999999931 11123999999999853
No 65
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.23 E-value=3.5e-11 Score=98.82 Aligned_cols=78 Identities=15% Similarity=0.203 Sum_probs=62.7
Q ss_pred cCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCC-CCCCCCCCCceEEEEEeCCCceeeEEccCc
Q 010700 52 NGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSL 130 (503)
Q Consensus 52 Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~ 130 (503)
+..|..+.|++++||+|+ +.|....++++|+++. .||... .+..|.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~--~~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVT--WINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEE--EEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEE--EEECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 445657899999999965 5699888999999863 356654 556799999999888 379999999987
Q ss_pred hhhhhcCceeeEEEE
Q 010700 131 HFQRASGGFGGFIIN 145 (503)
Q Consensus 131 ~~q~~~Gl~G~liV~ 145 (503)
+. ||.|.|+|+
T Consensus 95 H~----gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP----FMRGKVVVE 105 (105)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 53 899999984
No 66
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.17 E-value=2e-12 Score=127.37 Aligned_cols=98 Identities=16% Similarity=0.153 Sum_probs=67.6
Q ss_pred eeEEEEEcCCCCC--ceEEEecCCEEEEEEEeCCCC--CeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCC
Q 010700 45 PQQVIAINGKFPG--PTINVTTNNNVVVNVRNKLDE--SLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQ 120 (503)
Q Consensus 45 ~~~~~~~Ng~~pg--P~i~~~~Gd~v~v~v~N~l~~--~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~ 120 (503)
...+++|||+..+ |.|++++||++++||.|.... .+++|+||.... .||.......|.|||++++.|++ ++
T Consensus 200 ~~~~~~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~----~dG~~~dtv~l~pger~~v~~~~-~~ 274 (306)
T 1sdd_A 200 SSLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLE----QNHHKISAITLVSATSTTANMTV-SP 274 (306)
T ss_dssp CCEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCE----ETTEECSCCCEETTCCBC--------
T ss_pred CCcceeeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEee----eCCEEcceEEECCCcEEEEEEEc-CC
Confidence 4568999999864 899999999999999999764 678999997542 47865556789999999999999 58
Q ss_pred ceeeEEccCchhhhhcCceeeEEEEeC
Q 010700 121 VGSFFYFPSLHFQRASGGFGGFIINNR 147 (503)
Q Consensus 121 ~Gt~wyH~H~~~q~~~Gl~G~liV~~~ 147 (503)
+|+|+||||...+...||.|.|.|.+.
T Consensus 275 pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 275 EGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp -CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred CeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 999999999999999999999999875
No 67
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.16 E-value=4.9e-11 Score=129.50 Aligned_cols=103 Identities=17% Similarity=0.157 Sum_probs=87.0
Q ss_pred ceeEEEEEcCCC-CCceEEEecCCEEEEEEEeCCC--CCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCC
Q 010700 44 VPQQVIAINGKF-PGPTINVTTNNNVVVNVRNKLD--ESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQ 120 (503)
Q Consensus 44 ~~~~~~~~Ng~~-pgP~i~~~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~ 120 (503)
....+++|||+. +.|.|++++|+++++||.|... ..+.+|+||..+.. ...||.......|.||+++++.|++ ++
T Consensus 224 ~~~~~~~iNG~~~~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~v-i~~d~~~~d~v~l~pg~r~~v~~~~-~~ 301 (647)
T 1sdd_B 224 NSHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLE-NGTQQHQLGVWPLLPGSFKTLEMKA-SK 301 (647)
T ss_dssp CCCEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEE-CSSSCEEESSEEECTTEEEEEEEEC-CS
T ss_pred hcCceeccCCEecCCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEE-ecCCCcccceEEECCCeEEEEEEEe-cc
Confidence 345789999997 5799999999999999999975 47999999987654 2456543356779999999999999 57
Q ss_pred ceeeEEccCchhhhhcCceeeEEEEeCC
Q 010700 121 VGSFFYFPSLHFQRASGGFGGFIINNRA 148 (503)
Q Consensus 121 ~Gt~wyH~H~~~q~~~Gl~G~liV~~~~ 148 (503)
+|+|+||||...+...||.|.|+|.++.
T Consensus 302 pG~w~~hch~~~h~~~Gm~~~~~V~~~~ 329 (647)
T 1sdd_B 302 PGWWLLDTEVGEIQRAGMQTPFLIVDRE 329 (647)
T ss_dssp SEEEEEECCCHHHHTTTCEEEEEEECTT
T ss_pred ceEeecccCcccccccccccceeeeccc
Confidence 9999999999999999999999998753
No 68
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.16 E-value=3.9e-09 Score=111.95 Aligned_cols=241 Identities=7% Similarity=0.010 Sum_probs=145.5
Q ss_pred eEEEEEcCCCC----------------CceEEEecCCEEEEEEEeCCC-CCeeEEEccCCCCCCCCCCCCCC-----CCC
Q 010700 46 QQVIAINGKFP----------------GPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNC 103 (503)
Q Consensus 46 ~~~~~~Ng~~p----------------gP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DG~~~-----~q~ 103 (503)
...++|||+.. -++|++++|+++++||.|... ....+|++|..+.. .+.||.+. ...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEE
Confidence 34689999732 379999999999999999965 56789999987654 57899763 345
Q ss_pred CCCCCCceEEEEEeCCCceeeEEccCchh-----hhhcCceeeEEEEeCCCCCCCCC-CC-CCceEEEEee--eeeCCH-
Q 010700 104 PIPPKWNWTYQFQVKDQVGSFFYFPSLHF-----QRASGGFGGFIINNRAIIPIPFD-TP-DGDITILIGD--WYTRNH- 173 (503)
Q Consensus 104 ~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~-----q~~~Gl~G~liV~~~~~~~~~~~-~~-d~e~~l~l~d--~~~~~~- 173 (503)
.|.|||+++..+++.+..|.||....... +.. +..-+++....+....|-. .. ..+. .+.+ ......
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~-~~~~aiL~Y~~~~~~~P~~~~~~~~~~--~~~~~~~~L~P~~ 380 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEA-ANATGILRYDSSSIANPTSVGTTPRGT--CEDEPVASLVPHL 380 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTG-GGCEEEEESSTTCCCCCCCCCCCCCCC--SCCSCGGGCCBSS
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCC-CceEEEEEECCCCCCCCCCCCCCccch--hhcccccccccCC
Confidence 68999999999999656799999976532 111 1112333333221111110 00 0000 0000 000000
Q ss_pred -HHHH------HHhhcCCCCCCCCeEEECCcCCCCCCCCC------CCCC---CCceeEEE----eCCcEEEEEEeEeCC
Q 010700 174 -TALR------KTLDAGKGLGMPDGVLINGKGPYQYNTTL------VPDG---IDYETIEV----HPGKTYRIRVHNVGI 233 (503)
Q Consensus 174 -~~~~------~~~~~~~~~~~~~~~liNG~~~~~~~~~~------~~~~---~~~~~~~v----~~G~~~rlRliN~g~ 233 (503)
.... ..+..+ ......|.|||..+....... .+.. .....+.+ +.|+++.|.|-|.+.
T Consensus 381 ~~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~ 458 (580)
T 3sqr_A 381 ALDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTG 458 (580)
T ss_dssp CCBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSS
T ss_pred CCCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCc
Confidence 0000 000000 011235889998763211110 0000 01123444 359999999999872
Q ss_pred -CCeeeEEEeCCcEEEEEecCC------------ccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeeec
Q 010700 234 -STSLNFRIQNHNLLLAETEGS------------YTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (503)
Q Consensus 234 -~~~~~~~i~gh~~~via~DG~------------~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~~ 294 (503)
...|+||+|||.|+|++...+ +..|...|++.+.||+.+.+.++++++ | .+.++++...
T Consensus 459 ~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNP-G-~W~~HCHi~~ 530 (580)
T 3sqr_A 459 FGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNP-G-SWLLHCHIAW 530 (580)
T ss_dssp SCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSC-E-EEEEEECSHH
T ss_pred cccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCC-e-eeEEEECcHH
Confidence 248999999999999988432 234788999999999999999999965 6 5667777653
No 69
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.15 E-value=9.9e-12 Score=136.20 Aligned_cols=214 Identities=8% Similarity=0.079 Sum_probs=120.7
Q ss_pred CceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCC---------CC
Q 010700 212 DYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQ---------NA 282 (503)
Q Consensus 212 ~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~---------~~ 282 (503)
..|+|+++.|++++++|.|.... .+.+|.||..+....-||.+- ..-.|.||++++..+++++ ..
T Consensus 197 pGP~Ir~~~GD~v~v~~~N~l~~-~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~ 270 (770)
T 2r7e_B 197 LGPYIRAEVEDNIMVTFRNQASR-PYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDC 270 (770)
T ss_dssp CCCCCCCCSSSCEEEEEECCSSS-CCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSE
T ss_pred CCCeEEEEcCCEEEEEEEECCCC-CcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCC
Confidence 35999999999999999999754 788888888765444357642 1235899999999999875 45
Q ss_pred CcceEEEEeeeccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCcccccc--cccc-ccccCCCC--CCCCCCCC
Q 010700 283 STDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMN--QARS-IRWNVSAS--GARPNPQG 357 (503)
Q Consensus 283 g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~--~~~~-~~~~l~~~--~~~~~p~~ 357 (503)
| .||.+++.....+. ...+.+ ++|............ .+.. +.+..+- .... ..+.+... .....|..
T Consensus 271 G-t~wYHsh~~~~~q~-~~GL~G-~liV~~~~~~~~~~~---~~~~--d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~ 342 (770)
T 2r7e_B 271 K-AWAYSSDVDLEKDV-HSGLIG-PLLVCHTNTLNPAHG---RQVT--VQEFALFFTIFDETKSWYFTENMERNCRAPCN 342 (770)
T ss_dssp E-EEEECCCSSSSHHH-HTSCCE-EEEEECSTTSCSSSC---CCCS--SEEEECCCCEECCSSSSCTTGGGSSCSCCSSC
T ss_pred e-eEEeeccCCcHHHH-hCCcee-eEEECCCcccccccC---CCcc--ceEEEEEEeecCccccchhccchhhcccCccc
Confidence 6 89998776532111 112222 233332211000000 0100 1111100 0000 00000000 00000100
Q ss_pred CCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhccccccccCccccCCCCCCCCCCCCcceEEEecCCC
Q 010700 358 SFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYR 437 (503)
Q Consensus 358 ~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g 437 (503)
.... +. . .......|.|||+.|. +. ..+.++.|
T Consensus 343 -~~~~--d~----------~-~~~~~~~~~ING~~~~--~~-------------------------------~~l~v~~G 375 (770)
T 2r7e_B 343 -IQME--DP----------T-FKENYRFHAINGYIMD--TL-------------------------------PGLVMAQD 375 (770)
T ss_dssp -CCSS--SS----------S-STTTSCEECTTSCTTT--TC-------------------------------CCCCCCSS
T ss_pred -cccC--Cc----------c-ccccCCccccCCccCC--CC-------------------------------CCeEEeCC
Confidence 0000 00 0 1111234778888652 11 11245779
Q ss_pred cEEEEEEeCCCC--CCCceeecCCceEEEeeccCCCCCCCCCCCCCCCCCccceEEeCCCCcccCcc
Q 010700 438 GFMEVILQNNDT--KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQARRHLCSNRNY 502 (503)
Q Consensus 438 ~~vdivi~N~~~--~~HP~HLHGh~F~Vl~~g~g~~~~~~~~~~n~~~p~~RDTv~v~~~g~~~~~~ 502 (503)
++|.|.|.|.+. ..||||||||.|+|++.+ | -++||+.|+|+++..|+|
T Consensus 376 e~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~d-g---------------~~~Dtv~l~Pg~~~~v~~ 426 (770)
T 2r7e_B 376 QRIRWYLLSMGSNENIHSIHFSGHVFTVRKKE-E---------------YKMALYNLYPGVFETVEM 426 (770)
T ss_dssp SCEEEECCCCCSSSCCCEEEBSSCCEECCSSS-C---------------CEESEEECCTTCCCEEEE
T ss_pred CEEEEEEEeCCCCcceEEEEEcCCEEEEEecC-C---------------ceeeEEEECCCeEEEEEE
Confidence 999999999874 389999999999998763 2 389999999999887765
No 70
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.12 E-value=3.5e-10 Score=111.57 Aligned_cols=100 Identities=18% Similarity=0.232 Sum_probs=81.4
Q ss_pred EEEcCCCC--CceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCC--------CCCCCCCCCceEEEEEeC
Q 010700 49 IAINGKFP--GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG--------TNCPIPPKWNWTYQFQVK 118 (503)
Q Consensus 49 ~~~Ng~~p--gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~--------~q~~i~PG~~~~y~f~~~ 118 (503)
|++||+.. .|.|.+++||+|+++|.|.....+.+|+||..+.. ...||..+ ....|.||+++++.+.+-
T Consensus 163 ~t~Ng~~~~~~~~l~v~~Ge~vr~~liN~g~~~hpfHlHGh~F~v-~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~ 241 (313)
T 3tas_A 163 MTINNRPAHTGPDFEATVGDRVEFVMITHGEYYHTFHLHGHRWAD-NRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAG 241 (313)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEES-STTSSCCSTTCCCCEESEEEECTTCEEEEEEETT
T ss_pred hhcccCCcccccccccccCCEEEEEEecccccceeeeecCCeeEE-EEECCccCCCCCCeeeeEEEeCCCcceEEEEEec
Confidence 46787632 68999999999999999998889999999986543 34555432 123489999999999863
Q ss_pred --CCceeeEEccCchhhhhcCceeeEEEEeCCC
Q 010700 119 --DQVGSFFYFPSLHFQRASGGFGGFIINNRAI 149 (503)
Q Consensus 119 --~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~ 149 (503)
+.+|+|+||||...+...||.|.|.|++++.
T Consensus 242 ~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~ 274 (313)
T 3tas_A 242 EGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 274 (313)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTC
T ss_pred cCCCCEeEEEEeCChHHHHCCCeEEEEEECCCC
Confidence 3589999999999999999999999998765
No 71
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.11 E-value=4.4e-10 Score=116.49 Aligned_cols=211 Identities=11% Similarity=0.054 Sum_probs=125.5
Q ss_pred CeEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCC-CCeeeEEEeCCcEEEEEecCCccceeeecEEEEcC
Q 010700 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGI-STSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHV 268 (503)
Q Consensus 190 ~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~-~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~p 268 (503)
..|++||+.. .|+|+++.|++++||+.|... ...+.+|+||+. ..||... ...|.|
T Consensus 49 ~~~~~ng~~p-------------gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~p 105 (442)
T 2zoo_A 49 VFWSFGETVP-------------GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAP 105 (442)
T ss_dssp EEEEETTBSS-------------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCT
T ss_pred EEEEECCcCC-------------CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECC
Confidence 5799999874 389999999999999999864 258999999975 3677542 235899
Q ss_pred CceEEEEEEeCCCCCcceEEEEeeec-cccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCccccccccccccccCC
Q 010700 269 GQSYSFLVTMDQNASTDYYIVASARF-VNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVS 347 (503)
Q Consensus 269 GeR~dvlv~~~~~~g~~y~i~~~~~~-~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~ 347 (503)
|+++++.+++++ +| .||.+++... ..+. . ....+.|.+.... +++ .. +.+..+- ..++...
T Consensus 106 g~~~~y~f~~~~-~G-t~~yH~H~~~~~~~~-~--~Gl~G~~iv~~~~-----~~~---~~--d~e~~l~---l~d~~~~ 167 (442)
T 2zoo_A 106 GHTSTFNFKALN-PG-LYIYHCATAPVGMHI-A--NGMYGLILVEPKE-----GLA---PV--DREYYLV---QGDFYTK 167 (442)
T ss_dssp TCEEEEEEECCS-CE-EEEEECCCSSHHHHH-H--TTCEEEEEEECTT-----CCC---CC--SEEEEEE---EEEECBS
T ss_pred CCEEEEEEEcCC-Ce-EEEEecCCCChHHHH-h--CccEEEEEEeCCC-----CCC---CC--CceEEEE---eeeeecc
Confidence 999999999985 67 8999985421 1110 0 1123333333221 111 11 1111110 0011111
Q ss_pred CCCCCCCCCCCCCcCccceeEEEEEecCCCCccCCeEEEEecCccCCCCCCchhccccccccCccccCCCCCCCCCCCCc
Q 010700 348 ASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRM 427 (503)
Q Consensus 348 ~~~~~~~p~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~iN~~s~~~~~~P~l~~~~~~~~~~~~~~~~~~p~~~~~~~ 427 (503)
... ..+ +. ..+.+.. + .......+.|||+.+....
T Consensus 168 ~~~--~~~------~~----~~~~~~~-~--~~~~~~~~liNG~~~~~~~------------------------------ 202 (442)
T 2zoo_A 168 GEF--GEA------GL----QPFDMAK-A--IDEDADYVVFNGSVGSTTD------------------------------ 202 (442)
T ss_dssp SCT--TCC------EE----ECBCHHH-H--HTTCCSEEEETTSTTTTSG------------------------------
T ss_pred Ccc--ccc------cc----ccCChhH-h--ccCCCCEEEECCCcCCCCC------------------------------
Confidence 000 000 00 0000000 0 0011235789998753110
Q ss_pred ceEEEecCCCcEEEEEEeCCCC-CCCceeecCCceEEEeeccCCCCCCCCCCCCCCCCCccceEEeCCCCcc
Q 010700 428 ETSVINGTYRGFMEVILQNNDT-KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQARRHLCS 498 (503)
Q Consensus 428 ~~~~~~~~~g~~vdivi~N~~~-~~HP~HLHGh~F~Vl~~g~g~~~~~~~~~~n~~~p~~RDTv~v~~~g~~ 498 (503)
...+.++.|++|.|.|.|.+. ..|+||+|||.|.|++..++.. .|.+.|++.|.+++-.
T Consensus 203 -~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~-----------~p~~~~~~~l~pg~r~ 262 (442)
T 2zoo_A 203 -ENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSL-----------KNHNVQTTLIPAGGAA 262 (442)
T ss_dssp -GGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEE
T ss_pred -CCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccC-----------CCccceEEEECCCeeE
Confidence 023456789999999999753 6899999999999999865421 2667888888777543
No 72
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.11 E-value=1.9e-10 Score=94.60 Aligned_cols=83 Identities=11% Similarity=0.178 Sum_probs=63.5
Q ss_pred CceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCC-----CCCCCCCCCCceEEEEEeCCCceeeEEccCch
Q 010700 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL-----GTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH 131 (503)
Q Consensus 57 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~-----~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~ 131 (503)
.+.|++++||+|++ .|....++++|+|+.... ..+|.. .....+.||++++|.|++++++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~---~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKVPPHNVVFDAALNP---AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSSCCCBEECSSSST---TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--
T ss_pred CCEEEECCCCEEEE--EECCCCCceEEEeCCCCc---ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--
Confidence 37999999999654 588777899999886432 123320 123458999999999987558999999999
Q ss_pred hhhhcCceeeEEEEe
Q 010700 132 FQRASGGFGGFIINN 146 (503)
Q Consensus 132 ~q~~~Gl~G~liV~~ 146 (503)
.+...||.|.|+|++
T Consensus 92 ~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 92 PHRGAGMVGKITVAG 106 (106)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred ChhhcCcEEEEEEcC
Confidence 667789999999963
No 73
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.08 E-value=1.7e-09 Score=116.93 Aligned_cols=234 Identities=10% Similarity=0.002 Sum_probs=136.4
Q ss_pred eeEEEEEcCCCCCceEEEecCCEEEEEEEeCCC-CCeeEEEccCC-------CCCCCCCCCCCC------------CCCC
Q 010700 45 PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQ-------QRRSSWQDGLLG------------TNCP 104 (503)
Q Consensus 45 ~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~-------~~~~~~~DG~~~------------~q~~ 104 (503)
....+++||+. .|.+.++. .++|+||.|... ....+.+-|.. +. -.+.||... +...
T Consensus 253 ~gd~~~vNG~~-~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~-vIa~DG~~l~~Pv~v~~p~~~~~l~ 329 (612)
T 3gyr_A 253 FGPYTTVNGRI-WPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVH-QIGSDGGLLPRPVPVDFDDTLPVLS 329 (612)
T ss_dssp CCSEEEETTEE-SCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEE-EEEETTEEEEEEEEECSSSSSSSEE
T ss_pred cCceeeecCCc-cceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEE-EEEeCCCccccceeccCcccccEEE
Confidence 34678999986 68998865 589999999854 55666665542 11 146898421 2345
Q ss_pred CCCCCceEEEEEeCCCceeeEEccCchh-------hhhcCce--e--eEEEEeCCCCC---CCC------CCCCCce---
Q 010700 105 IPPKWNWTYQFQVKDQVGSFFYFPSLHF-------QRASGGF--G--GFIINNRAIIP---IPF------DTPDGDI--- 161 (503)
Q Consensus 105 i~PG~~~~y~f~~~~~~Gt~wyH~H~~~-------q~~~Gl~--G--~liV~~~~~~~---~~~------~~~d~e~--- 161 (503)
|.||||++..+++.+..|.+|+-..... ....+.. . .+.+....... .+. .....+.
T Consensus 330 i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 409 (612)
T 3gyr_A 330 AAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHG 409 (612)
T ss_dssp ECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCE
T ss_pred eccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccccccc
Confidence 8999999999999655666655322110 0001111 1 12222211100 000 0000010
Q ss_pred --EEEEeeeeeCCH------------HHHHHHhh-------cCCCCCCCCeEEECCcCCCCCCCCCCCCCCCceeEEEeC
Q 010700 162 --TILIGDWYTRNH------------TALRKTLD-------AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHP 220 (503)
Q Consensus 162 --~l~l~d~~~~~~------------~~~~~~~~-------~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~ 220 (503)
...+..-..... ........ ..........+.+|++.+. +...+.++.
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-----------~~~~~~~~~ 478 (612)
T 3gyr_A 410 HRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTFN-----------DGLGFTIGE 478 (612)
T ss_dssp EEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECSTT-----------SCCCEEEET
T ss_pred cccccccccccccccccccccccccccccccccccccceeeeccCCCccccccccCccCC-----------CCcceEeCC
Confidence 111110000000 00000000 0001112345778888762 246788999
Q ss_pred CcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCcc---------------------------ceeeecEEEEcCCceEE
Q 010700 221 GKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT---------------------------VQQNYTSLDIHVGQSYS 273 (503)
Q Consensus 221 G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~---------------------------~p~~~d~v~l~pGeR~d 273 (503)
|++++|.|+|.+.. .|+||||||.|+|++.+|... ++...|+|.+.+|+.+.
T Consensus 479 g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~ 557 (612)
T 3gyr_A 479 GTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLR 557 (612)
T ss_dssp TCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEE
T ss_pred CCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEE
Confidence 99999999999876 899999999999998765321 12347999999999999
Q ss_pred EEEEeCCCCCcceEEEEeeec
Q 010700 274 FLVTMDQNASTDYYIVASARF 294 (503)
Q Consensus 274 vlv~~~~~~g~~y~i~~~~~~ 294 (503)
|.+++.+.+| .|.++|+...
T Consensus 558 i~~rfadnpG-~w~~HCHil~ 577 (612)
T 3gyr_A 558 VMGKFDGAYG-RFMYHCHLLE 577 (612)
T ss_dssp EEEECCSCCE-EEEEEESSHH
T ss_pred EEEEeCCCCc-ceEEcCCChH
Confidence 9999655667 7777888754
No 74
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.04 E-value=1.2e-09 Score=94.50 Aligned_cols=90 Identities=10% Similarity=0.063 Sum_probs=67.8
Q ss_pred CCCCceEEEecCCEEEEEEEeCCCC-CeeEEEccCCC-----------------CCCCCCCCCCC-CCCCCCCCCceEEE
Q 010700 54 KFPGPTINVTTNNNVVVNVRNKLDE-SLLIHWSGIQQ-----------------RRSSWQDGLLG-TNCPIPPKWNWTYQ 114 (503)
Q Consensus 54 ~~pgP~i~~~~Gd~v~v~v~N~l~~-~~siH~HG~~~-----------------~~~~~~DG~~~-~q~~i~PG~~~~y~ 114 (503)
+|--+.|++++||+|+++|+|.... +++++.|+... ...+..+.... ....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 4445799999999999999999777 89999887421 00000111001 23448999999999
Q ss_pred EEeCCCceeeEEccCchhhhhcCceeeEEEE
Q 010700 115 FQVKDQVGSFFYFPSLHFQRASGGFGGFIIN 145 (503)
Q Consensus 115 f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~ 145 (503)
|++ +++|+|+||||...+.. ||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 998 58999999999888877 999999984
No 75
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.95 E-value=6.2e-09 Score=90.04 Aligned_cols=92 Identities=12% Similarity=0.060 Sum_probs=67.8
Q ss_pred CCCCceEEEecCCEEEEEEEe--CCCCCeeEEEccCC------------C----CCCCCCCCCC-C-CCCCCCCCCceEE
Q 010700 54 KFPGPTINVTTNNNVVVNVRN--KLDESLLIHWSGIQ------------Q----RRSSWQDGLL-G-TNCPIPPKWNWTY 113 (503)
Q Consensus 54 ~~pgP~i~~~~Gd~v~v~v~N--~l~~~~siH~HG~~------------~----~~~~~~DG~~-~-~q~~i~PG~~~~y 113 (503)
+|-.+.|++++||+|+++++| .....++++.+... . ..-+..|... . ....|.||++.++
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEE
Confidence 343479999999999999999 66778888887321 0 0000011111 1 2245899999999
Q ss_pred EEEeCCCceeeEEccCchhhhhcCceeeEEEEe
Q 010700 114 QFQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146 (503)
Q Consensus 114 ~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~ 146 (503)
.|++ +.+|+|+|||+...+...||.|.|+|.+
T Consensus 109 ~~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 109 TFRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 9998 5899999999988888899999999974
No 76
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.88 E-value=4.6e-09 Score=85.25 Aligned_cols=79 Identities=11% Similarity=0.127 Sum_probs=64.2
Q ss_pred cCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCch
Q 010700 52 NGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH 131 (503)
Q Consensus 52 Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~ 131 (503)
|..|-...|++++||+|++.++|....++++...+.... ..+.||++.++.|+. +++|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~~- 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID------------VVVESGKEKNITVKP-KSAGTYELICRY- 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE------------EEECTTCEEEEEECC-CSCEEEEEECTT-
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc------------eeecCCcceeEEEec-ccCceEEEECcc-
Confidence 445544689999999999999999877888777765321 347899999999997 689999999974
Q ss_pred hhhhcCceeeEEEE
Q 010700 132 FQRASGGFGGFIIN 145 (503)
Q Consensus 132 ~q~~~Gl~G~liV~ 145 (503)
+...||.|.|+|+
T Consensus 88 -H~~~gM~G~i~Ve 100 (100)
T 4hci_A 88 -HLLKGMEGKVIVK 100 (100)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -ccCCCCEEEEEEC
Confidence 5567999999995
No 77
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.79 E-value=4.4e-09 Score=84.96 Aligned_cols=80 Identities=13% Similarity=0.148 Sum_probs=58.7
Q ss_pred CceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCC--CCCCCCCCCCCceEEEEEeCCCceeeEEccCchhhh
Q 010700 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGL--LGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQR 134 (503)
Q Consensus 57 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~--~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~ 134 (503)
-+.|++++||+|+ ++|....++++|+|+..... ..|.. +.....+.||+++++.|+ ++|+|+|||+ .+.
T Consensus 17 P~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~--~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~--~H~ 87 (98)
T 2plt_A 17 PKTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPS--GVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCE--PHQ 87 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECGGGSCT--TCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECG--GGG
T ss_pred CCEEEECCCCEEE--EEECCCCceEEEEeCCCCCC--ccccccccccceecCCCCEEEEEeC---CCeEEEEEcC--Ccc
Confidence 3789999999865 58987789999999853211 11110 001235899999999874 6899999999 466
Q ss_pred hcCceeeEEEE
Q 010700 135 ASGGFGGFIIN 145 (503)
Q Consensus 135 ~~Gl~G~liV~ 145 (503)
..||.|.|+|+
T Consensus 88 ~~gM~G~i~V~ 98 (98)
T 2plt_A 88 GAGMVGKIIVQ 98 (98)
T ss_dssp GGTCEEEEEEC
T ss_pred ccCCeEEEEEC
Confidence 67999999984
No 78
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.78 E-value=1.7e-08 Score=86.21 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=57.3
Q ss_pred cCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCC-CCCCCCCCCceEEEEEeCCCceeeEEccCc
Q 010700 52 NGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSL 130 (503)
Q Consensus 52 Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~ 130 (503)
+-.|-.+.|++++||+|++ .|....++++++... .+|... ....+.||++++|.| +++|+|+|+|-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCC-------CCCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 4455457999999999754 588777777776542 122222 334689999999888 368999999976
Q ss_pred hhhhhcCceeeEEEE
Q 010700 131 HFQRASGGFGGFIIN 145 (503)
Q Consensus 131 ~~q~~~Gl~G~liV~ 145 (503)
+. ||.|.|+|+
T Consensus 122 H~----gM~G~I~V~ 132 (132)
T 3c75_A 122 HP----FMRGKVIVE 132 (132)
T ss_dssp CT----TCEEEEEEC
T ss_pred Cc----CCEEEEEEC
Confidence 43 999999984
No 79
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.74 E-value=4.6e-09 Score=84.87 Aligned_cols=81 Identities=15% Similarity=0.176 Sum_probs=57.5
Q ss_pred CceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCchhhhhc
Q 010700 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (503)
Q Consensus 57 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~ 136 (503)
.+.|++++||+|+ +.|....++++|.++....+ ...++.......+.||+++++.| +++|+|+|||+ .+...
T Consensus 18 P~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~pg-~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~~ 89 (98)
T 1pcs_A 18 PSTVTIKAGEEVK--WVNNKLSPHNIVFDADGVPA-DTAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHRGA 89 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECCSSSCH-HHHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEE--EEECCCCCcEEEEeCCCCCc-cccccccccccccCCCCEEEEEc---CCCeEEEEEcC--Ccccc
Confidence 3689999999865 45876678999988753210 00000000124589999999987 36999999999 56678
Q ss_pred CceeeEEEE
Q 010700 137 GGFGGFIIN 145 (503)
Q Consensus 137 Gl~G~liV~ 145 (503)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 1pcs_A 90 GMVGKVVVE 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999984
No 80
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.70 E-value=2.6e-08 Score=79.10 Aligned_cols=74 Identities=16% Similarity=0.283 Sum_probs=55.7
Q ss_pred CceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCchhhhhc
Q 010700 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (503)
Q Consensus 57 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~ 136 (503)
.+.|++++||+|+ +.|....+++++.++... .. .....+.||+++++.| +++|+|+|||+ .+...
T Consensus 18 P~~i~v~~Gd~V~--~~n~~~~~H~v~~~~~~~----~~----~~~~~~~~g~~~~~~f---~~~G~y~~~C~--~H~~~ 82 (91)
T 1bxv_A 18 PSTIEIQAGDTVQ--WVNNKLAPHNVVVEGQPE----LS----HKDLAFSPGETFEATF---SEPGTYTYYCE--PHRGA 82 (91)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEETTCGG----GC----EEEEECSTTCEEEEEC---CSCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEE--EEECCCCCcEEEEeCCCc----cC----cccceeCCCCEEEEEe---CCCEEEEEEeC--CCccC
Confidence 4789999999975 458767789999887310 00 0124588999988877 47999999999 44556
Q ss_pred CceeeEEEE
Q 010700 137 GGFGGFIIN 145 (503)
Q Consensus 137 Gl~G~liV~ 145 (503)
||.|.|+|+
T Consensus 83 gM~g~i~V~ 91 (91)
T 1bxv_A 83 GMVGKIVVQ 91 (91)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999984
No 81
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.66 E-value=6.7e-08 Score=77.76 Aligned_cols=76 Identities=11% Similarity=0.245 Sum_probs=56.8
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCC---CCCCCCCCCCceEEEEEeCCCceeeEEccCchhhh
Q 010700 58 PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL---GTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQR 134 (503)
Q Consensus 58 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~---~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~ 134 (503)
+.|++++||+| ++.|....+++++.++... .+|.. .....+.||+++++.| +++|+|+|||+ .+.
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H~ 86 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PHR 86 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--STT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe---CCCeEEEEEcc--Chh
Confidence 68999999985 5668766788888887532 11211 1124589999999987 47999999999 556
Q ss_pred hcCceeeEEEE
Q 010700 135 ASGGFGGFIIN 145 (503)
Q Consensus 135 ~~Gl~G~liV~ 145 (503)
.+||.|.|+|+
T Consensus 87 ~~gM~G~i~V~ 97 (97)
T 1b3i_A 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred hcCCEEEEEEC
Confidence 67999999984
No 82
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.63 E-value=7.4e-08 Score=78.29 Aligned_cols=82 Identities=7% Similarity=0.045 Sum_probs=56.0
Q ss_pred CceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCC-----CCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCch
Q 010700 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRR-----SSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH 131 (503)
Q Consensus 57 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~-----~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~ 131 (503)
-+.|++++||+|+ +.|....+++++++.-.-.. .....+.......+.||+++++.| +++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~-- 88 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYCT-- 88 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEECS--
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEeC--
Confidence 3789999999976 56887677888876310000 000001000224589999999877 47999999999
Q ss_pred hhhhcCceeeEEEE
Q 010700 132 FQRASGGFGGFIIN 145 (503)
Q Consensus 132 ~q~~~Gl~G~liV~ 145 (503)
.+...||.|.|+|+
T Consensus 89 ~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 89 PHKSANMKGTLTVK 102 (102)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred CCcccCCeEEEEEC
Confidence 66778999999984
No 83
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.60 E-value=1.6e-07 Score=75.76 Aligned_cols=76 Identities=9% Similarity=0.214 Sum_probs=57.4
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCC-------CCCCCCCCCCceEEEEEeCCCceeeEEccCc
Q 010700 58 PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL-------GTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL 130 (503)
Q Consensus 58 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~-------~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~ 130 (503)
+.|++++||+| +++|....++++|.++... .+|.. .....+.||+++++.|+ ++|+|+|||+
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~- 85 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA- 85 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG-
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC-
Confidence 68999999985 5588877788888887432 12221 11235799999998874 6999999999
Q ss_pred hhhhhcCceeeEEEE
Q 010700 131 HFQRASGGFGGFIIN 145 (503)
Q Consensus 131 ~~q~~~Gl~G~liV~ 145 (503)
.+...||.|.|+|+
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 -PHAGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CccccCCEEEEEEC
Confidence 56667999999984
No 84
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=98.60 E-value=1.3e-07 Score=94.07 Aligned_cols=99 Identities=15% Similarity=0.159 Sum_probs=73.2
Q ss_pred eEEEEEcCCCC----CceEEEecCCEEEEEEEeCCCC--CeeEEEccCCCCCCCCCCCCCC-------CCCCCCCCCceE
Q 010700 46 QQVIAINGKFP----GPTINVTTNNNVVVNVRNKLDE--SLLIHWSGIQQRRSSWQDGLLG-------TNCPIPPKWNWT 112 (503)
Q Consensus 46 ~~~~~~Ng~~p----gP~i~~~~Gd~v~v~v~N~l~~--~~siH~HG~~~~~~~~~DG~~~-------~q~~i~PG~~~~ 112 (503)
...++|||+.- .|.|++++|+++|+++.|.... .+.+|.|++.+ ..||... ....|.|||+++
T Consensus 209 ~~~~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~V----i~dG~~~~~p~~~~dtv~l~pGer~~ 284 (333)
T 1mzy_A 209 PSHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLV----WETGKFHNAPERDLETWFIRGGTAGA 284 (333)
T ss_dssp CSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEE----ETTCCTTSCCEEEESBCCBCTTEEEE
T ss_pred CcEEEECCcccccCCCcceEecCCCEEEEEECCCCCccccEEECCCCeEE----EeCCcccCCCccCcceEEECCCceEE
Confidence 35799999852 3679999999998887775322 23344455433 2377642 124689999999
Q ss_pred EEEEeCCCceeeEEccCchhhh-hcCceeeEEEEeCCC
Q 010700 113 YQFQVKDQVGSFFYFPSLHFQR-ASGGFGGFIINNRAI 149 (503)
Q Consensus 113 y~f~~~~~~Gt~wyH~H~~~q~-~~Gl~G~liV~~~~~ 149 (503)
..+++ +++|.||||||...+. ..||.|.|.|..+..
T Consensus 285 v~v~a-~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 285 ALYKF-LQPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp EEEEC-CSCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred EEEEc-CCCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 99999 5799999999988664 889999999987543
No 85
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.59 E-value=1.8e-07 Score=75.60 Aligned_cols=77 Identities=10% Similarity=0.165 Sum_probs=57.0
Q ss_pred CceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCC-------CCCCCCCCCCceEEEEEeCCCceeeEEccC
Q 010700 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL-------GTNCPIPPKWNWTYQFQVKDQVGSFFYFPS 129 (503)
Q Consensus 57 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~-------~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H 129 (503)
.+.|++++||+| +++|....+++++.++... .+|.. -....+.||+++++.|+ ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV--~~~n~~~~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKI--VFKNNAGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEE--EEEECSSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG
T ss_pred CCEEEECCCCEE--EEEECCCCceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEEC---CCceEEEEcC
Confidence 368999999986 4588877788888876422 12211 01235799999988774 6999999999
Q ss_pred chhhhhcCceeeEEEE
Q 010700 130 LHFQRASGGFGGFIIN 145 (503)
Q Consensus 130 ~~~q~~~Gl~G~liV~ 145 (503)
.+..+||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 --PHQGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CCcccCCEEEEEEC
Confidence 56668999999984
No 86
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=98.59 E-value=1.5e-07 Score=93.85 Aligned_cols=100 Identities=16% Similarity=0.155 Sum_probs=73.1
Q ss_pred EEEEEcCCCC----CceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCC-------CCCCCCCCCceEEEE
Q 010700 47 QVIAINGKFP----GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-------TNCPIPPKWNWTYQF 115 (503)
Q Consensus 47 ~~~~~Ng~~p----gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~-------~q~~i~PG~~~~y~f 115 (503)
..++|||+.- -|.|++++|+++|+++.|......-.|.||..+.. ..||... ....|.|||+++..|
T Consensus 216 ~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~V--i~dG~~~~~p~~~~dtv~l~pGer~~v~v 293 (340)
T 2bw4_A 216 THIVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYV--WATGKFRNPPDLDQETWLIPGGTAGAAFY 293 (340)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEE--ETTCCTTSCCEEEESCCCBCTTEEEEEEE
T ss_pred CEEEECCccCCccCCCceEcCCCCEEEEEECCCCCccceEEecCcceEE--eCCCcccCCccccceEEEeCCCceEEEEE
Confidence 5799999863 38999999999887777654332222344433332 2377542 235689999999999
Q ss_pred EeCCCceeeEEccCch-hhhhcCceeeEEEEeCCC
Q 010700 116 QVKDQVGSFFYFPSLH-FQRASGGFGGFIINNRAI 149 (503)
Q Consensus 116 ~~~~~~Gt~wyH~H~~-~q~~~Gl~G~liV~~~~~ 149 (503)
++ +++|.||||||.. .+...||.|.|.|+.+..
T Consensus 294 ~~-~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 294 TF-RQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp EC-CSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EC-CCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 99 5799999999987 477889999999987543
No 87
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.59 E-value=1.2e-07 Score=79.46 Aligned_cols=75 Identities=9% Similarity=0.016 Sum_probs=53.0
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCchhhhhcC
Q 010700 58 PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASG 137 (503)
Q Consensus 58 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~G 137 (503)
..|++++||+|++.+.|. ++++..+.- ..-+|. ....+.||++++|.| +++|+|||+|. .+..+|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~~-----~~P~g~--~~f~~~pg~t~s~TF---~~pG~y~y~C~--~H~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIKE-----ILPEGV--ESFKSKINESYTLTV---TEPGLYGVKCT--PHFGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECTT-----SSCTTC--CCCBCCTTCCEEEEE---CSCEEEEEECG--GGTTTT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcCC-----cCCCCc--cceecCCCCEEEEEe---CCCeEEEEEeC--CCCcCC
Confidence 699999999977766662 444443321 112232 123467999999988 36899999998 566789
Q ss_pred ceeeEEEEeC
Q 010700 138 GFGGFIINNR 147 (503)
Q Consensus 138 l~G~liV~~~ 147 (503)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999873
No 88
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.56 E-value=1e-07 Score=80.36 Aligned_cols=77 Identities=13% Similarity=0.126 Sum_probs=52.9
Q ss_pred CceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCchhhhhc
Q 010700 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (503)
Q Consensus 57 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~ 136 (503)
.+.|++++||+|++.+.|. ++++..+.- ..-||. ....+.||++++|.| +++|+|||||.. +..+
T Consensus 22 P~~i~V~~GDtVtf~n~~~---~H~v~~~~~-----~~P~g~--~~f~s~pGet~s~TF---~~pG~y~y~C~~--H~~~ 86 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK---GHNSALMKG-----GAPEGA--ETWKGKINEEITVTL---SKPGVYMYQCAP--HVGM 86 (127)
T ss_dssp SSEEEECTTCEEEEECSSS---SCCCEECTT-----CSCTTC--CCCBCCTTCCCEEEC---CSCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEEEEEECCC---CceEEEccC-----cCCCCc--cceecCCCCEEEEEe---CCCeEEEEEeCC--CCcC
Confidence 3799999999976655543 444433321 011221 124467999999888 368999999984 5668
Q ss_pred CceeeEEEEeCC
Q 010700 137 GGFGGFIINNRA 148 (503)
Q Consensus 137 Gl~G~liV~~~~ 148 (503)
||.|.|+|.++.
T Consensus 87 GM~G~I~V~~~~ 98 (127)
T 3tu6_A 87 GMIGAIVVGEPA 98 (127)
T ss_dssp TCEEEEEESSCT
T ss_pred CcEEEEEECcCC
Confidence 999999999754
No 89
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.51 E-value=4.6e-07 Score=75.90 Aligned_cols=75 Identities=9% Similarity=0.007 Sum_probs=53.8
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCchhhhhcC
Q 010700 58 PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASG 137 (503)
Q Consensus 58 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~G 137 (503)
..|++++||+|+ +.|.. .++++..+... .-+|. ....+.||++++|.|+ .+|+|+|||- .+..+|
T Consensus 22 ~~i~V~~GDTV~--f~n~~-~~Hnv~~~~~~-----~p~g~--~~~~~~pg~t~s~TF~---~~G~y~Y~C~--~H~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVK--FVPTD-KSHNAESVREV-----WPEGV--APVKGGFSKEVVFNAE---KEGLYVLKCA--PHYGMG 86 (124)
T ss_dssp SEEEECTTCEEE--EECSS-SSCCCEECTTT-----SCTTS--CCCBCCTTCCEEEECC---SSEEEEEECT--TTGGGT
T ss_pred CEEEECCCCEEE--EEECC-CCccEEEeCCc-----CCCCc--cccccCCCCEEEEEeC---CCeEEEEEcC--CCCcCC
Confidence 699999999965 55654 56666655321 11221 2244679999999883 6899999996 566689
Q ss_pred ceeeEEEEeC
Q 010700 138 GFGGFIINNR 147 (503)
Q Consensus 138 l~G~liV~~~ 147 (503)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999874
No 90
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=98.44 E-value=5.1e-07 Score=89.83 Aligned_cols=100 Identities=15% Similarity=0.186 Sum_probs=72.4
Q ss_pred eEEEEEcCCCC----CceEEEecCCEEEEEEEeCCCCCeeEEE-ccCCCCCCCCCCCCCC-------CCCCCCCCCceEE
Q 010700 46 QQVIAINGKFP----GPTINVTTNNNVVVNVRNKLDESLLIHW-SGIQQRRSSWQDGLLG-------TNCPIPPKWNWTY 113 (503)
Q Consensus 46 ~~~~~~Ng~~p----gP~i~~~~Gd~v~v~v~N~l~~~~siH~-HG~~~~~~~~~DG~~~-------~q~~i~PG~~~~y 113 (503)
...++|||+.. .|.|.+++|+++++...+.. ....+|. ||..+.. ..||.+. ....|.|||+++.
T Consensus 209 ~~~~liNG~~~~~~~~~~l~v~~GervRlin~~~~-~~~~~~~i~gh~~~V--i~DG~~~~p~~~~~dtv~i~pGer~dv 285 (336)
T 1oe1_A 209 PSHIVFNGKVGALTGANALTAKVGETVLLIHSQAN-RDTRPHLIGGHGDWV--WETGKFANPPQRDLETWFIRGGSAGAA 285 (336)
T ss_dssp CSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESS-SCBCEEETTCCEEEE--ETTCCTTSCCEEEESBCCBCTTEEEEE
T ss_pred CCEEEECCeeccCCCCcceEcCCCCEEEEEecCCC-CccceEEECCcCceE--eCCCcCcCCccccceEEEECCCCcEEE
Confidence 46799999963 38999999999876544442 2333343 4433232 2488753 1346899999999
Q ss_pred EEEeCCCceeeEEccCchhh-hhcCceeeEEEEeCCC
Q 010700 114 QFQVKDQVGSFFYFPSLHFQ-RASGGFGGFIINNRAI 149 (503)
Q Consensus 114 ~f~~~~~~Gt~wyH~H~~~q-~~~Gl~G~liV~~~~~ 149 (503)
.+++ +++|+||||||...+ ...|+.|.|.|+.+..
T Consensus 286 lv~~-~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 286 LYTF-KQPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp EEEC-CSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EEEc-CCCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 9999 479999999998765 4789999999997544
No 91
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.37 E-value=4.4e-07 Score=73.10 Aligned_cols=77 Identities=9% Similarity=0.016 Sum_probs=55.0
Q ss_pred CceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCC-----CCCCCCCCCceEEEEEeCCCceeeEEccCch
Q 010700 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH 131 (503)
Q Consensus 57 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~-----~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~ 131 (503)
.+.|++++||+|+ +.|....++++....-.. -+|... ....+.||+++++.| +++|+|+|+|..
T Consensus 17 P~~i~v~~GdtV~--~~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~- 85 (98)
T 1iuz_A 17 PSKISVAAGEAIE--FVNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEP- 85 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTT-
T ss_pred CCEEEECCCCEEE--EEECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchh-
Confidence 4799999999955 568866778877665211 122210 113588999998887 379999999985
Q ss_pred hhhhcCceeeEEEE
Q 010700 132 FQRASGGFGGFIIN 145 (503)
Q Consensus 132 ~q~~~Gl~G~liV~ 145 (503)
+..+||.|.|+|+
T Consensus 86 -H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 86 -HAGAGMKMTITVQ 98 (98)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -hccCCCEEEEEEC
Confidence 4556999999984
No 92
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.34 E-value=8.5e-07 Score=74.99 Aligned_cols=92 Identities=15% Similarity=0.033 Sum_probs=61.6
Q ss_pred CCCCceEEEecC-CEEEEEEEeCCCCC-----eeE--EEccCCC-------C-C-----CCCCCCCCC-CCCCCCCCCce
Q 010700 54 KFPGPTINVTTN-NNVVVNVRNKLDES-----LLI--HWSGIQQ-------R-R-----SSWQDGLLG-TNCPIPPKWNW 111 (503)
Q Consensus 54 ~~pgP~i~~~~G-d~v~v~v~N~l~~~-----~si--H~HG~~~-------~-~-----~~~~DG~~~-~q~~i~PG~~~ 111 (503)
+|--..|.|++| |+|+|+|+|....+ +++ -=+|..+ . + -+..|.--. ....|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 343458999999 99999999986543 333 2233100 0 0 001111111 22458999999
Q ss_pred EEEEEeC--CCceeeEEccCchhhhhcCceeeEEEEe
Q 010700 112 TYQFQVK--DQVGSFFYFPSLHFQRASGGFGGFIINN 146 (503)
Q Consensus 112 ~y~f~~~--~~~Gt~wyH~H~~~q~~~Gl~G~liV~~ 146 (503)
++.|+++ .++|+|||.|-...+.. ||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 9999984 37999999998766666 8999999964
No 93
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.30 E-value=1.8e-06 Score=72.36 Aligned_cols=76 Identities=11% Similarity=0.038 Sum_probs=50.8
Q ss_pred CceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCchhhhhc
Q 010700 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (503)
Q Consensus 57 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~ 136 (503)
.+.|++++||+|+ +.|... ++++..+- ...-||.. .....||++++|.| +.+|+|+|+|.. +..+
T Consensus 20 P~~i~V~~GdtV~--f~~~~~-~H~v~~~~-----~~~p~~~~--~~~~~pG~t~~~tF---~~~G~y~y~C~~--H~~~ 84 (123)
T 1paz_A 20 PAYIKANPGDTVT--FIPVDK-GHNVESIK-----DMIPEGAE--KFKSKINENYVLTV---TQPGAYLVKCTP--HYAM 84 (123)
T ss_dssp SSEEEECTTCEEE--EEESSS-SCCCEECT-----TCSCTTCC--CCBCCTTCCEEEEC---CSCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEEE--EEECCC-CeEEEEec-----ccCCCCcc--ceecCCCCEEEEEe---CCCEEEEEEeCC--cccC
Confidence 3799999999965 555533 44444331 01112221 13346899988887 368999999973 5567
Q ss_pred CceeeEEEEeC
Q 010700 137 GGFGGFIINNR 147 (503)
Q Consensus 137 Gl~G~liV~~~ 147 (503)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1paz_A 85 GMIALIAVGDS 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEEcCC
Confidence 99999999874
No 94
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.26 E-value=5.1e-06 Score=67.85 Aligned_cols=77 Identities=17% Similarity=0.156 Sum_probs=53.9
Q ss_pred CCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCC-CCCCCCCCCceEEEEEeCCCceeeEEccCch
Q 010700 53 GKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH 131 (503)
Q Consensus 53 g~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~-~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~ 131 (503)
..|--+.|++++||+|+ +.|....++++...... .|... ....+.||+++++.| +++|+|+|+|-.+
T Consensus 29 ~~F~P~~i~V~~G~tV~--~~N~d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H 96 (106)
T 1id2_A 29 MKYLTPEVTIKAGETVY--WVNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPH 96 (106)
T ss_dssp TEESSSEEEECTTCEEE--EEECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSC
T ss_pred cEEeCCEEEECCCCEEE--EEECCCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe---CCCEEEEEEeCCC
Confidence 34444799999999975 45886666666554321 11111 223588999999888 3689999999764
Q ss_pred hhhhcCceeeEEEE
Q 010700 132 FQRASGGFGGFIIN 145 (503)
Q Consensus 132 ~q~~~Gl~G~liV~ 145 (503)
. ||.|.|+|+
T Consensus 97 ~----~M~G~I~V~ 106 (106)
T 1id2_A 97 P----FMRGKVIVE 106 (106)
T ss_dssp T----TCEEEEEEC
T ss_pred C----CCEEEEEEC
Confidence 2 899999984
No 95
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.24 E-value=2e-06 Score=72.21 Aligned_cols=76 Identities=8% Similarity=0.034 Sum_probs=51.2
Q ss_pred CceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCchhhhhc
Q 010700 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (503)
Q Consensus 57 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~ 136 (503)
.+.|++++||+|+ +.|... ++++..+. ...-||.. ...+.||++++|.| +.+|+|+|+|.. +..+
T Consensus 20 P~~i~V~~GdtV~--f~n~~~-~H~v~~~~-----~~~p~~~~--~~~~~pG~t~~~tF---~~~G~y~y~C~~--H~~~ 84 (123)
T 1pmy_A 20 PALVRLKPGDSIK--FLPTDK-GHNVETIK-----GMAPDGAD--YVKTTVGQEAVVKF---DKEGVYGFKCAP--HYMM 84 (123)
T ss_dssp SSEEEECTTCEEE--EECSSS-SCCCEECT-----TSSCTTCC--CCBCCTTSCEEEEC---CSCEEEEEECST--TTTT
T ss_pred CCEEEECCCCEEE--EEECCC-CcEEEEec-----ccCCCCcc--ceecCCCCEEEEEe---CCCeEEEEEeCC--cccc
Confidence 3799999999955 556533 44444331 01122211 23457999988887 368999999974 5567
Q ss_pred CceeeEEEEeC
Q 010700 137 GGFGGFIINNR 147 (503)
Q Consensus 137 Gl~G~liV~~~ 147 (503)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1pmy_A 85 GMVALVVVGDK 95 (123)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEEcCC
Confidence 99999999864
No 96
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.22 E-value=1.4e-06 Score=76.73 Aligned_cols=97 Identities=9% Similarity=-0.001 Sum_probs=63.7
Q ss_pred EEEcC--CCCCceEEE-ecCCEEEEEEEeCCCCC-----eeEEE--ccCC---------CC---CCCCCCCCCC-CCCCC
Q 010700 49 IAING--KFPGPTINV-TTNNNVVVNVRNKLDES-----LLIHW--SGIQ---------QR---RSSWQDGLLG-TNCPI 105 (503)
Q Consensus 49 ~~~Ng--~~pgP~i~~-~~Gd~v~v~v~N~l~~~-----~siH~--HG~~---------~~---~~~~~DG~~~-~q~~i 105 (503)
+..++ +|--..|.| ++||+|+|+|+|....+ +++-+ +|.. .- .-+..|.-.. ....|
T Consensus 47 I~~~d~m~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l 126 (167)
T 3ay2_A 47 VESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLI 126 (167)
T ss_dssp EEECTTSCBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCB
T ss_pred EEeCCCceEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceee
Confidence 44453 454458999 99999999999997653 33322 2210 00 0000111111 22458
Q ss_pred CCCCceEEEEEeC-CCceeeEEccCchhhhhcCceeeEEEEe
Q 010700 106 PPKWNWTYQFQVK-DQVGSFFYFPSLHFQRASGGFGGFIINN 146 (503)
Q Consensus 106 ~PG~~~~y~f~~~-~~~Gt~wyH~H~~~q~~~Gl~G~liV~~ 146 (503)
.||+++++.|+++ -++|+|||+|-...+.. ||.|.|+|.+
T Consensus 127 ~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 127 GGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp CTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred CCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 9999999999974 16999999998766666 8999999973
No 97
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.11 E-value=1.2e-05 Score=67.93 Aligned_cols=92 Identities=14% Similarity=0.065 Sum_probs=59.8
Q ss_pred CCCCceEEE-ecCCEEEEEEEeCCCCC-----eeEEE--ccCCC-------------CCCCCCCCCCC-CCCCCCCCCce
Q 010700 54 KFPGPTINV-TTNNNVVVNVRNKLDES-----LLIHW--SGIQQ-------------RRSSWQDGLLG-TNCPIPPKWNW 111 (503)
Q Consensus 54 ~~pgP~i~~-~~Gd~v~v~v~N~l~~~-----~siH~--HG~~~-------------~~~~~~DG~~~-~q~~i~PG~~~ 111 (503)
+|--..|.| ++||+|+|+|+|....+ +++-+ +|..+ ..-+..|.--. ....|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 443358999 99999999999997553 43332 22100 00001111111 22358999999
Q ss_pred EEEEEeCC-Ccee-eEEccCchhhhhcCceeeEEEEe
Q 010700 112 TYQFQVKD-QVGS-FFYFPSLHFQRASGGFGGFIINN 146 (503)
Q Consensus 112 ~y~f~~~~-~~Gt-~wyH~H~~~q~~~Gl~G~liV~~ 146 (503)
++.|+++. ++|+ |||.|....+.. ||.|.|+|.+
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 99999840 4655 999998766666 8999999963
No 98
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.08 E-value=1.4e-05 Score=67.37 Aligned_cols=92 Identities=15% Similarity=0.098 Sum_probs=60.9
Q ss_pred CCCCceEEE-ecCCEEEEEEEeCCCCC-----eeEEEcc-----------CCC----CCCCCCCCCCC-CCCCCCCCCce
Q 010700 54 KFPGPTINV-TTNNNVVVNVRNKLDES-----LLIHWSG-----------IQQ----RRSSWQDGLLG-TNCPIPPKWNW 111 (503)
Q Consensus 54 ~~pgP~i~~-~~Gd~v~v~v~N~l~~~-----~siH~HG-----------~~~----~~~~~~DG~~~-~q~~i~PG~~~ 111 (503)
+|--..|.| +.||+|+|+|+|....+ +++-+-. +.. ..-+..|.--. ....|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 444468999 99999999999997654 5443321 100 00001111111 22458999999
Q ss_pred EEEEEeCC-Ccee-eEEccCchhhhhcCceeeEEEEe
Q 010700 112 TYQFQVKD-QVGS-FFYFPSLHFQRASGGFGGFIINN 146 (503)
Q Consensus 112 ~y~f~~~~-~~Gt-~wyH~H~~~q~~~Gl~G~liV~~ 146 (503)
++.|+++. ++|+ |+|.|....+.. ||.|.|+|.+
T Consensus 93 ~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 93 SVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp EEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 99999841 5885 999998776666 8999999963
No 99
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.06 E-value=1.4e-05 Score=67.30 Aligned_cols=91 Identities=11% Similarity=0.008 Sum_probs=59.9
Q ss_pred CCCCceEEE-ecCCEEEEEEEeCCCCC-----eeEEE--ccCC-------CCCCCCCC-----CCC-C-CCCCCCCCCce
Q 010700 54 KFPGPTINV-TTNNNVVVNVRNKLDES-----LLIHW--SGIQ-------QRRSSWQD-----GLL-G-TNCPIPPKWNW 111 (503)
Q Consensus 54 ~~pgP~i~~-~~Gd~v~v~v~N~l~~~-----~siH~--HG~~-------~~~~~~~D-----G~~-~-~q~~i~PG~~~ 111 (503)
+|--..|.| ++||+|+|+|+|....+ +++-+ .|.. +.....+| ..- . ....|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 444458999 99999999999996553 44433 2210 00000111 111 1 12358999999
Q ss_pred EEEEEeCC-Ccee-eEEccCchhhhhcCceeeEEEE
Q 010700 112 TYQFQVKD-QVGS-FFYFPSLHFQRASGGFGGFIIN 145 (503)
Q Consensus 112 ~y~f~~~~-~~Gt-~wyH~H~~~q~~~Gl~G~liV~ 145 (503)
++.|+++. ++|+ |+|.|....+.. ||.|.|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999841 4776 999998776766 899999984
No 100
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.02 E-value=1.8e-05 Score=81.82 Aligned_cols=94 Identities=17% Similarity=0.168 Sum_probs=67.1
Q ss_pred CCCcee--EEEEEcCCCCCceEEEecCCEEEEEEEeCC---CCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEE
Q 010700 41 PLGVPQ--QVIAINGKFPGPTINVTTNNNVVVNVRNKL---DESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQF 115 (503)
Q Consensus 41 ~dG~~~--~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l---~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f 115 (503)
.+|.+. .|...+-.|-.+.|++++||+|++.++|.. +..++....++.. ...+.||++.++.|
T Consensus 539 RdGnkV~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI------------K~DaiPGrtnsvtF 606 (638)
T 3sbq_A 539 RDGNKVRVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV------------SMEISPQQTSSITF 606 (638)
T ss_dssp EETTEEEEEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE------------EEEECTTCEEEEEE
T ss_pred cCCceEEEEEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCCCc------------eeeeCCCCeEEEEE
Confidence 355543 344455667667999999999999999973 3444444433211 13478999999999
Q ss_pred EeCCCceeeEEccCch-hhhhcCceeeEEEEeC
Q 010700 116 QVKDQVGSFFYFPSLH-FQRASGGFGGFIINNR 147 (503)
Q Consensus 116 ~~~~~~Gt~wyH~H~~-~q~~~Gl~G~liV~~~ 147 (503)
++ +++|+|||+|+.- .....+|.|.|+|+++
T Consensus 607 ta-dkPGvY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 607 VA-DKPGLHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EC-CSCEEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred Ec-CCCEEEEEECCCcCCCCcccceEEEEEecC
Confidence 98 6899999999842 2223579999999873
No 101
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.00 E-value=1.2e-05 Score=67.21 Aligned_cols=73 Identities=12% Similarity=0.029 Sum_probs=49.5
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCchhhhhcC
Q 010700 58 PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASG 137 (503)
Q Consensus 58 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~G 137 (503)
+.|++++||+|+ +.|... .++++...- ..-+|. ....+.||++++|.| +++|+|+|+|..+..
T Consensus 21 ~~i~V~~GdtV~--f~n~d~-~H~v~~~~~-----~~p~~~--~~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~---- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVT--FIPTDK-GHNVETIKG-----MIPDGA--EAFKSKINENYKVTF---TAPGVYGVKCTPHPF---- 83 (122)
T ss_dssp SEEEECTTEEEE--EEESSS-SCCCEECTT-----CSCTTC--CCCBCCTTCCEEEEE---CSCEEEEEEETTEEE----
T ss_pred CEEEECCCCEEE--EEECCC-CcEEEEccc-----ccCCCc--ceeecCCCCEEEEEe---CCCEEEEEEeCCCcc----
Confidence 699999999855 556643 444444321 111221 123457999998888 368999999986432
Q ss_pred ceeeEEEEeC
Q 010700 138 GFGGFIINNR 147 (503)
Q Consensus 138 l~G~liV~~~ 147 (503)
|.|.|+|.+.
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 9999999874
No 102
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.54 E-value=0.00042 Score=57.49 Aligned_cols=88 Identities=14% Similarity=0.108 Sum_probs=56.1
Q ss_pred CCCCceEEEec-CCEEEEEEEeCCCCC-----eeEEE-----------ccCCCC----CCCCCCCCCC-CCCCCCCCCce
Q 010700 54 KFPGPTINVTT-NNNVVVNVRNKLDES-----LLIHW-----------SGIQQR----RSSWQDGLLG-TNCPIPPKWNW 111 (503)
Q Consensus 54 ~~pgP~i~~~~-Gd~v~v~v~N~l~~~-----~siH~-----------HG~~~~----~~~~~DG~~~-~q~~i~PG~~~ 111 (503)
+|--..|.|++ |++|+|+|+|....+ +++=+ -|+..- .-+..|.-.. ....|.||+++
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 34457999986 999999999997543 33211 122110 0011121111 22348999999
Q ss_pred EEEEEeC--CCceeeEEccCchhhhhcCceeeEEEE
Q 010700 112 TYQFQVK--DQVGSFFYFPSLHFQRASGGFGGFIIN 145 (503)
Q Consensus 112 ~y~f~~~--~~~Gt~wyH~H~~~q~~~Gl~G~liV~ 145 (503)
+..|+.+ .++|+|.|-|. .+. ||.|.|+|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999985 26899999999 444 899999983
No 103
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=96.94 E-value=0.0016 Score=55.55 Aligned_cols=78 Identities=17% Similarity=0.146 Sum_probs=51.0
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEE---ec-------CCccc----eeeecEEEEcCCceEEEEEEe
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAE---TE-------GSYTV----QQNYTSLDIHVGQSYSFLVTM 278 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via---~D-------G~~~~----p~~~d~v~l~pGeR~dvlv~~ 278 (503)
++.+++++|++++|+|.|.+....|.|++++....+.+ .| ..++. ....++..|.|||++++.+++
T Consensus 34 p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~f~~ 113 (139)
T 2aan_A 34 KTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTA 113 (139)
T ss_dssp CSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEEEEC
T ss_pred CCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEEEEC
Confidence 47899999999999999987542455555443210000 00 01111 123466779999999999998
Q ss_pred CCCCCcceEEEEee
Q 010700 279 DQNASTDYYIVASA 292 (503)
Q Consensus 279 ~~~~g~~y~i~~~~ 292 (503)
+ .+| .|++.+..
T Consensus 114 ~-~pG-~y~f~C~~ 125 (139)
T 2aan_A 114 P-AAG-TYLYICTV 125 (139)
T ss_dssp C-SSE-EEEEECCS
T ss_pred C-CCe-EEEEEcCC
Confidence 7 457 89988763
No 104
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.90 E-value=0.004 Score=52.71 Aligned_cols=75 Identities=16% Similarity=0.203 Sum_probs=53.3
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCch-hhhhc
Q 010700 58 PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH-FQRAS 136 (503)
Q Consensus 58 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~~-~q~~~ 136 (503)
..|.++.|++|++.++|. +..+++..-++.. ...+.||+.-++.|++ +++|+|.|+|..- .....
T Consensus 60 ~~l~Vp~G~~V~~~vts~-DV~Hsf~ip~~~~------------k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H~ 125 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSP-DVIHGFHVEGTNI------------NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQ 125 (135)
T ss_dssp SSEEEETTSEEEEEEEBS-SSCEEEEETTSSC------------EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTST
T ss_pred CEEEEcCCCEEEEEEEeC-CccceEEecCCCc------------eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCcC
Confidence 489999999999999997 3444433322211 1236789999999998 6899999999631 11124
Q ss_pred CceeeEEEEe
Q 010700 137 GGFGGFIINN 146 (503)
Q Consensus 137 Gl~G~liV~~ 146 (503)
+|.|.++|.+
T Consensus 126 ~M~g~v~V~~ 135 (135)
T 2cua_A 126 NMFGTIVVKE 135 (135)
T ss_dssp TCEEEEEEEC
T ss_pred CCEEEEEEEC
Confidence 7999998864
No 105
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=96.85 E-value=0.00053 Score=55.31 Aligned_cols=73 Identities=19% Similarity=0.258 Sum_probs=50.7
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEe
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVAS 291 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~ 291 (503)
.+.+++++|++++| .|.+.. .|.+++++..+.. .+|..-.....++..|.||+++++.+.+++.+| .||+.++
T Consensus 18 p~~i~v~~Gd~V~~--~N~~~~-~H~v~~~~~~~~~--~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G-~y~y~C~ 90 (105)
T 3cvb_A 18 PANVTVHPGDTVKW--VNNKLP-PHNILFDDKQVPG--ASKELADKLSHSQLMFSPGESYEITFSSDFPAG-TYTYYCA 90 (105)
T ss_dssp SSEEEECTTEEEEE--EECSSC-CEEEEECTTSSGG--GCHHHHHHHCEEEEECSTTCEEEEEECTTSCSE-EEEEECT
T ss_pred CCEEEEcCCCEEEE--EECCCC-CCeEEEeCCCCCc--ccccccccccccccccCCCCeEEEEEecCCCCe-eEEEEeC
Confidence 47899999998865 587654 7899998875422 011110111246788999999999887744568 8999887
No 106
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.72 E-value=0.0067 Score=53.15 Aligned_cols=81 Identities=15% Similarity=0.178 Sum_probs=58.6
Q ss_pred cCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCc-
Q 010700 52 NGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL- 130 (503)
Q Consensus 52 Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~- 130 (503)
+-.|--..|.++.|++|++.++|. +..++...-++.. +.-+.||+...+.|++ +++|+|++.|..
T Consensus 87 ~~~f~Pn~l~VP~G~~Vr~~vTS~-DViHsf~IP~lgi------------k~da~PG~~n~~~~~~-~kpG~y~g~Cse~ 152 (168)
T 3s8f_B 87 AFGYQPNPIEVPQGAEIVFKITSP-DVIHGFHVEGTNI------------NVEVLPGEVSTVRYTF-KRPGEYRIICNQY 152 (168)
T ss_dssp TTEEESSSEEEETTSEEEEEEECS-SSCEEEEETTSSC------------EEEECTTBCEEEEEEC-CSCEEEEEECCSC
T ss_pred eceEecCEEEEeCCCeEEEEEecC-CceEEEEECCCCe------------EEEecCCceeEEEEEe-CCCEEEEEECCcC
Confidence 334433589999999999999997 5555544443321 1235789999999998 689999999983
Q ss_pred hhhhhcCceeeEEEEe
Q 010700 131 HFQRASGGFGGFIINN 146 (503)
Q Consensus 131 ~~q~~~Gl~G~liV~~ 146 (503)
-.....+|.|.++|++
T Consensus 153 CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 153 CGLGHQNMFGTIVVKE 168 (168)
T ss_dssp CSTTGGGCEEEEEEEC
T ss_pred CCCCcCCCEEEEEEeC
Confidence 2344457999999874
No 107
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=96.68 E-value=0.0052 Score=50.11 Aligned_cols=62 Identities=24% Similarity=0.287 Sum_probs=48.4
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA 292 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~ 292 (503)
.+.+++++|++++|++.|.... .|.+.+.+.. -...+.||+++++.+.++ .+| .|+..+..
T Consensus 37 p~~i~v~~G~~V~~~~~n~d~~-~H~~~i~~~~----------------~~~~i~pG~~~~~~f~~~-~~G-~y~~~C~~ 97 (112)
T 1iby_A 37 PETLVVKKGDAVKVVVENKSPI-SEGFSIDAFG----------------VQEVIKAGETKTISFTAD-KAG-AFTIWCQL 97 (112)
T ss_dssp SCEEEEETTCEEEEEEEECSSS-CEEEEEGGGT----------------EEEEECTTCEEEEEEECC-SCE-EEEEBCSS
T ss_pred CCEEEEeCCCEEEEEEEECCCC-eEEEEEcCCC----------------ceeEeCCCCEEEEEEECC-CCE-EEEEECCC
Confidence 3789999999999999998854 5666665431 146799999999999987 467 89997765
Q ss_pred e
Q 010700 293 R 293 (503)
Q Consensus 293 ~ 293 (503)
.
T Consensus 98 ~ 98 (112)
T 1iby_A 98 H 98 (112)
T ss_dssp S
T ss_pred C
Confidence 3
No 108
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=96.09 E-value=0.019 Score=45.65 Aligned_cols=61 Identities=16% Similarity=0.272 Sum_probs=47.5
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA 292 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~ 292 (503)
+..+++++|++++|++.|.+.. .|.|.+++... ...+.||+..++.+++++ +| .|.+.+..
T Consensus 27 P~~i~v~~G~tV~~~~~n~d~~-~H~~~~~~~~~----------------~~~~~pg~~~~~~~t~~~-~G-~Y~y~C~~ 87 (100)
T 4hci_A 27 PNVITIPINESTTLLLKNKGKS-EHTFTIKKLGI----------------DVVVESGKEKNITVKPKS-AG-TYELICRY 87 (100)
T ss_dssp SSEEEECTTSCEEEEEEECSSS-CEEEEEGGGTE----------------EEEECTTCEEEEEECCCS-CE-EEEEECTT
T ss_pred CCEEEECCCCEEEEEEEcCCCc-eEEEEEecCCc----------------ceeecCCcceeEEEeccc-Cc-eEEEECcc
Confidence 3689999999999999998865 57776655433 245789999999998884 57 89887753
No 109
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=95.42 E-value=0.0025 Score=51.41 Aligned_cols=73 Identities=18% Similarity=0.167 Sum_probs=46.6
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEe
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVAS 291 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~ 291 (503)
++.+++++|++++|+ |.+.. .|.+++++..+.. .+|........+.+.+.||+++++.+.++..+| .||+.+.
T Consensus 19 P~~i~v~~Gd~V~~~--n~~~~-~H~~~~~~~~~~~--~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G-~y~y~C~ 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEFL--NNKVP-PHNVVFDAALNPA--KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAG-EYTFYCE 91 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSSS-CCCBEECSSSSTT--CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSE-EEEEECT
T ss_pred CCEEEECCCCEEEEE--ECCCC-CceEEEeCCCCcc--cccccchhccccceeeCCCCEEEEEEecCCCCc-eEEEEeC
Confidence 478999999998775 87643 5777776542210 012100001124577899999999776534568 8999876
No 110
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.38 E-value=0.014 Score=48.90 Aligned_cols=79 Identities=16% Similarity=0.170 Sum_probs=49.8
Q ss_pred ceeEEE-eCCcEEEEEEeEeCCCC----eeeEEEeCCc-EEEEE-------ecCCcccee----eecEEEEcCCceEEEE
Q 010700 213 YETIEV-HPGKTYRIRVHNVGIST----SLNFRIQNHN-LLLAE-------TEGSYTVQQ----NYTSLDIHVGQSYSFL 275 (503)
Q Consensus 213 ~~~~~v-~~G~~~rlRliN~g~~~----~~~~~i~gh~-~~via-------~DG~~~~p~----~~d~v~l~pGeR~dvl 275 (503)
...|+| ++|++++|.+.|.+... .|.|.|.... +.-++ .+-.++.+. ...+-.|.|||+.++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 2ccw_A 17 VKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVT 96 (129)
T ss_dssp CSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEE
Confidence 468999 99999999999998652 3566654331 00000 011121110 1123358999999999
Q ss_pred EEeC--CCCCcceEEEEee
Q 010700 276 VTMD--QNASTDYYIVASA 292 (503)
Q Consensus 276 v~~~--~~~g~~y~i~~~~ 292 (503)
++++ ++++ +|+..+..
T Consensus 97 f~~~~l~~G~-~Y~f~C~~ 114 (129)
T 2ccw_A 97 FDVSKIAAGE-NYAYFCSF 114 (129)
T ss_dssp EEGGGSCTTC-CEEEECCS
T ss_pred EeccccCCCc-eEEEEeCC
Confidence 9987 5656 79997753
No 111
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=95.23 E-value=0.017 Score=48.30 Aligned_cols=79 Identities=16% Similarity=0.201 Sum_probs=49.7
Q ss_pred ceeEEE-eCCcEEEEEEeEeCCCC----eeeEEEeCCc-EEEEEe-------cCCcccee----eecEEEEcCCceEEEE
Q 010700 213 YETIEV-HPGKTYRIRVHNVGIST----SLNFRIQNHN-LLLAET-------EGSYTVQQ----NYTSLDIHVGQSYSFL 275 (503)
Q Consensus 213 ~~~~~v-~~G~~~rlRliN~g~~~----~~~~~i~gh~-~~via~-------DG~~~~p~----~~d~v~l~pGeR~dvl 275 (503)
+..++| ++|++++|.+.|.+... .|.|-|.... +.-++. +-.++.+. ...+-.|.|||+.++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (128)
T 1nwp_A 17 TKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVT 96 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEE
Confidence 468999 99999999999998652 3666664321 100001 11222111 1123358999999999
Q ss_pred EEeC--CCCCcceEEEEee
Q 010700 276 VTMD--QNASTDYYIVASA 292 (503)
Q Consensus 276 v~~~--~~~g~~y~i~~~~ 292 (503)
++++ ++++ +|+..+..
T Consensus 97 f~~~~l~~G~-~Y~f~C~~ 114 (128)
T 1nwp_A 97 FDVSKLAAGE-KYGFFCSF 114 (128)
T ss_dssp EEGGGSCTTS-CEEEECCS
T ss_pred EeccccCCCc-eEEEEECC
Confidence 9987 5545 79987753
No 112
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=95.15 E-value=0.033 Score=47.27 Aligned_cols=77 Identities=12% Similarity=0.119 Sum_probs=50.4
Q ss_pred ceeEEEeCCcEEEEEEeE--eCCCCeeeEEEeCC--cEEEE-------EecCCccc-----eeeecEEEEcCCceEEEEE
Q 010700 213 YETIEVHPGKTYRIRVHN--VGISTSLNFRIQNH--NLLLA-------ETEGSYTV-----QQNYTSLDIHVGQSYSFLV 276 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN--~g~~~~~~~~i~gh--~~~vi-------a~DG~~~~-----p~~~d~v~l~pGeR~dvlv 276 (503)
...+++++|++|+|++.| .+.. .|.|.+.+. .+.-. ..+..++. ....++..|.||++.++.+
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~~-~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~ 110 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLGV-QHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTF 110 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSCC-CBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEE
T ss_pred CCeEEECCCCEEEEEEECCCCCCC-ceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEEE
Confidence 478999999999999999 4443 666666531 11000 00111111 1234567899999999999
Q ss_pred EeCCCCCcceEEEEee
Q 010700 277 TMDQNASTDYYIVASA 292 (503)
Q Consensus 277 ~~~~~~g~~y~i~~~~ 292 (503)
++++ +| .|++.+..
T Consensus 111 ~~~~-~G-~y~f~C~~ 124 (140)
T 1qhq_A 111 RTPA-PG-TYLYICTF 124 (140)
T ss_dssp ECCS-SE-EEEEECCS
T ss_pred EeCC-Ce-eEEEEeCC
Confidence 9974 57 89998764
No 113
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=95.14 E-value=0.087 Score=45.47 Aligned_cols=84 Identities=19% Similarity=0.166 Sum_probs=51.7
Q ss_pred eEEECCcCCCCCCCCCCCCCCCceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCC--cEEEEEecCCccceeeecEEEEcC
Q 010700 191 GVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNH--NLLLAETEGSYTVQQNYTSLDIHV 268 (503)
Q Consensus 191 ~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh--~~~via~DG~~~~p~~~d~v~l~p 268 (503)
.+.++|... |.|++++|++++|++.|.+....|.+.+... .+.....+ ..+.........|.|
T Consensus 52 ~~~~~g~~~--------------p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~i~P 116 (154)
T 2cal_A 52 SFEVHDKKN--------------PTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVI-DPIVAGTGFSPVPKD 116 (154)
T ss_dssp CEEETTEES--------------CEEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCC-CSEEEEBCCCCCCBT
T ss_pred cccccCCCC--------------CEEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccc-cccccccccccccCC
Confidence 577788765 8999999999999999975333566655522 11100000 000000000126789
Q ss_pred Cc--eEEEEEEeCCCCCcceEEEEee
Q 010700 269 GQ--SYSFLVTMDQNASTDYYIVASA 292 (503)
Q Consensus 269 Ge--R~dvlv~~~~~~g~~y~i~~~~ 292 (503)
|| ..++.+++ + +| .||..+..
T Consensus 117 G~sgt~t~tft~-~-pG-tY~y~C~~ 139 (154)
T 2cal_A 117 GKFGYTDFTWHP-T-AG-TYYYVCQI 139 (154)
T ss_dssp TBEEEEEEEECC-C-SE-EEEEECCS
T ss_pred CCceEEEEEEEE-C-Cc-eEEEECCC
Confidence 99 88888887 4 57 89998864
No 114
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.57 E-value=0.037 Score=46.20 Aligned_cols=78 Identities=17% Similarity=0.199 Sum_probs=48.8
Q ss_pred ceeEEE-eCCcEEEEEEeEeCCCC----eeeEEEeCCc-EEEEE-------ecCCccce----eeecEEEEcCCceEEEE
Q 010700 213 YETIEV-HPGKTYRIRVHNVGIST----SLNFRIQNHN-LLLAE-------TEGSYTVQ----QNYTSLDIHVGQSYSFL 275 (503)
Q Consensus 213 ~~~~~v-~~G~~~rlRliN~g~~~----~~~~~i~gh~-~~via-------~DG~~~~p----~~~d~v~l~pGeR~dvl 275 (503)
+..++| ++|++++|.+.|.+... .|.|-|.... +.-++ .+-.++.+ ....+-.|.|||++++.
T Consensus 16 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vt 95 (128)
T 2iaa_C 16 TKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVT 95 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEE
Confidence 468999 99999999999998652 3666554321 10000 11122211 11223468999999999
Q ss_pred EEeC--CCCCcceEEEEe
Q 010700 276 VTMD--QNASTDYYIVAS 291 (503)
Q Consensus 276 v~~~--~~~g~~y~i~~~ 291 (503)
++++ ++++ +|+..+.
T Consensus 96 f~~~~l~~G~-~Y~f~C~ 112 (128)
T 2iaa_C 96 FDVSKLKEGE-DYAFFCS 112 (128)
T ss_dssp EESSCCCTTC-CEEEECC
T ss_pred EeccccCCCc-eEEEEEC
Confidence 9987 5544 6988765
No 115
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=94.52 E-value=0.031 Score=46.81 Aligned_cols=79 Identities=13% Similarity=0.110 Sum_probs=49.0
Q ss_pred ceeEEEeCC-cEEEEEEeEeCCCC----eeeEEEeCCcE-EEEEec-------CCccc---e-eeecEEEEcCCceEEEE
Q 010700 213 YETIEVHPG-KTYRIRVHNVGIST----SLNFRIQNHNL-LLAETE-------GSYTV---Q-QNYTSLDIHVGQSYSFL 275 (503)
Q Consensus 213 ~~~~~v~~G-~~~rlRliN~g~~~----~~~~~i~gh~~-~via~D-------G~~~~---p-~~~d~v~l~pGeR~dvl 275 (503)
...++|++| ++++|.+.|.+... .|.|.|..... .-++.+ -.++. + ....+..|.|||+.++.
T Consensus 17 p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 1cuo_A 17 TRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVK 96 (129)
T ss_dssp CSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEE
T ss_pred cCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEE
Confidence 478999999 99999999998652 35555543210 000000 01111 0 01123468999999999
Q ss_pred EEeC--CCCCcceEEEEee
Q 010700 276 VTMD--QNASTDYYIVASA 292 (503)
Q Consensus 276 v~~~--~~~g~~y~i~~~~ 292 (503)
++++ ..+| .||..+..
T Consensus 97 f~~~~~~~~G-~Y~f~C~~ 114 (129)
T 1cuo_A 97 FKVSALSKDE-AYTYFCSY 114 (129)
T ss_dssp EEGGGCCTTS-CEEEECCS
T ss_pred EeccccCCCc-eEEEEeCC
Confidence 9986 2457 89997753
No 116
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=94.03 E-value=0.068 Score=41.99 Aligned_cols=68 Identities=16% Similarity=0.181 Sum_probs=44.9
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEe
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVAS 291 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~ 291 (503)
++.+++++|++++| .|.+.. .|.+++++..+ .+|........+.+.+.||+++.+. ++ .+| .|++.+.
T Consensus 17 P~~i~v~~G~~V~~--~n~~~~-~H~~~~~~~~~----p~~~~~~~~~~~~~~~~pG~~~~~t--f~-~~G-~y~y~C~ 84 (98)
T 2plt_A 17 PKTLTIKSGETVNF--VNNAGF-PHNIVFDEDAI----PSGVNADAISRDDYLNAPGETYSVK--LT-AAG-EYGYYCE 84 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSC-CEEEEECGGGS----CTTCCHHHHCEEEEECSTTCEEEEE--CC-SCE-EEEEECG
T ss_pred CCEEEECCCCEEEE--EECCCC-ceEEEEeCCCC----CCccccccccccceecCCCCEEEEE--eC-CCe-EEEEEcC
Confidence 46899999999877 687643 67777765421 0111101112456889999999884 45 457 8999876
No 117
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=93.70 E-value=0.058 Score=42.44 Aligned_cols=67 Identities=13% Similarity=0.202 Sum_probs=43.8
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEe
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVAS 291 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~ 291 (503)
+..+++++|++++|+ |.+.. .|.+++++...- +.+ -.....+.+.+.||+.+++.+ + .+| .|++.+.
T Consensus 18 P~~i~v~~G~~V~~~--n~~~~-~H~~~~~~~~~p--g~~---~~~~~~~~~~~~pG~~~~~tf--~-~~G-~y~~~C~ 84 (98)
T 1pcs_A 18 PSTVTIKAGEEVKWV--NNKLS-PHNIVFDADGVP--ADT---AAKLSHKGLLFAAGESFTSTF--T-EPG-TYTYYCE 84 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSSC-CEEEEECCSSSC--HHH---HHHHCEEEEECSTTCEEEEEC--C-SCE-EEEEECG
T ss_pred CCEEEECCCCEEEEE--ECCCC-CcEEEEeCCCCC--ccc---cccccccccccCCCCEEEEEc--C-CCe-EEEEEcC
Confidence 468999999998876 76643 677777653211 000 001113578899999998754 5 467 8998876
No 118
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=93.54 E-value=0.15 Score=39.20 Aligned_cols=60 Identities=17% Similarity=0.273 Sum_probs=42.1
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEe
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVAS 291 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~ 291 (503)
+..+++++|++++|+ |.+.. .|.+++++.. +...+...+.||+.+.+.+ + .+| .|++.+.
T Consensus 18 P~~i~v~~Gd~V~~~--n~~~~-~H~v~~~~~~------------~~~~~~~~~~~g~~~~~~f--~-~~G-~y~~~C~ 77 (91)
T 1bxv_A 18 PSTIEIQAGDTVQWV--NNKLA-PHNVVVEGQP------------ELSHKDLAFSPGETFEATF--S-EPG-TYTYYCE 77 (91)
T ss_dssp SSEEEECTTCEEEEE--ECSSC-CEEEEETTCG------------GGCEEEEECSTTCEEEEEC--C-SCE-EEEEECT
T ss_pred CCEEEECCCCEEEEE--ECCCC-CcEEEEeCCC------------ccCcccceeCCCCEEEEEe--C-CCE-EEEEEeC
Confidence 468999999998875 76543 6777766520 1113567899999888754 4 467 8999876
No 119
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=93.45 E-value=0.27 Score=51.78 Aligned_cols=61 Identities=18% Similarity=0.250 Sum_probs=49.2
Q ss_pred ceeEEEeCCcEEEEEEeEeCCC--CeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEE
Q 010700 213 YETIEVHPGKTYRIRVHNVGIS--TSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVA 290 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~--~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~ 290 (503)
.+.++++.|++++|++.|.... -.|.|++.++.+. ..+.||+..++.++++ .+| .||..+
T Consensus 512 pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------~~i~PG~t~t~~Fta~-~pG-tY~yhC 573 (595)
T 1fwx_A 512 IESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------MEIGPQMTSSVTFVAA-NPG-VYWYYC 573 (595)
T ss_dssp CSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECC-SCE-EEEEEC
T ss_pred CCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------eeeCCCCeEEEEEECC-CCE-EEEEEC
Confidence 4899999999999999996532 2677877776432 5689999999999998 468 899988
Q ss_pred e
Q 010700 291 S 291 (503)
Q Consensus 291 ~ 291 (503)
+
T Consensus 574 ~ 574 (595)
T 1fwx_A 574 Q 574 (595)
T ss_dssp C
T ss_pred C
Confidence 7
No 120
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=92.41 E-value=0.093 Score=45.85 Aligned_cols=79 Identities=16% Similarity=0.189 Sum_probs=48.6
Q ss_pred ceeEEE-eCCcEEEEEEeEeCCCC----eeeEEEeCCc-EEEEEe------cCCccce----eeecEEEEcCCceEEEEE
Q 010700 213 YETIEV-HPGKTYRIRVHNVGIST----SLNFRIQNHN-LLLAET------EGSYTVQ----QNYTSLDIHVGQSYSFLV 276 (503)
Q Consensus 213 ~~~~~v-~~G~~~rlRliN~g~~~----~~~~~i~gh~-~~via~------DG~~~~p----~~~d~v~l~pGeR~dvlv 276 (503)
...|+| ++|++|+|.|.|.+... .|.|.|.... +.-++. +-.++.+ ....+..|.|||++++.+
T Consensus 57 P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~svtf 136 (167)
T 3ay2_A 57 TKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTL 136 (167)
T ss_dssp CSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEEEE
Confidence 468999 99999999999988642 3555554321 000000 0012211 112234689999999999
Q ss_pred EeCC-CCCcceEEEEee
Q 010700 277 TMDQ-NASTDYYIVASA 292 (503)
Q Consensus 277 ~~~~-~~g~~y~i~~~~ 292 (503)
+++. .+| .|++.+..
T Consensus 137 ~~~~lkpG-~Y~f~Ct~ 152 (167)
T 3ay2_A 137 DPAKLADG-DYKFACTF 152 (167)
T ss_dssp CGGGGTTS-CEEEECCS
T ss_pred ecCCCCCc-EEEEEcCC
Confidence 8862 357 79997754
No 121
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=92.38 E-value=0.035 Score=45.85 Aligned_cols=78 Identities=14% Similarity=0.195 Sum_probs=49.2
Q ss_pred ceeEEEeC-CcEEEEEEeEeCCCC----eeeEEEeCC-cEEEEEe-------cCCccce----eeecEEEEcCCceEEEE
Q 010700 213 YETIEVHP-GKTYRIRVHNVGIST----SLNFRIQNH-NLLLAET-------EGSYTVQ----QNYTSLDIHVGQSYSFL 275 (503)
Q Consensus 213 ~~~~~v~~-G~~~rlRliN~g~~~----~~~~~i~gh-~~~via~-------DG~~~~p----~~~d~v~l~pGeR~dvl 275 (503)
...|+|+. |+++||.|.|.|... .|.|-|... .+.-++. |-.++++ ....+..|.|||++++.
T Consensus 17 p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vt 96 (125)
T 3fsa_A 17 TNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVT 96 (125)
T ss_dssp CSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEE
Confidence 47899976 999999999999652 355555311 0100011 2233421 22345569999999999
Q ss_pred EEeCC--CCCcceEEEEe
Q 010700 276 VTMDQ--NASTDYYIVAS 291 (503)
Q Consensus 276 v~~~~--~~g~~y~i~~~ 291 (503)
++++. .+| +|...+.
T Consensus 97 f~~~~l~~~G-~y~f~C~ 113 (125)
T 3fsa_A 97 FDVSKLKEGE-QYMFFCA 113 (125)
T ss_dssp EEGGGC---C-CEEEECS
T ss_pred EeCcCcCCCc-cEEEEcC
Confidence 99873 457 8988765
No 122
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=92.21 E-value=0.098 Score=40.99 Aligned_cols=66 Identities=17% Similarity=0.207 Sum_probs=40.8
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEe
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVAS 291 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~ 291 (503)
+..+++++|++++|+ |.+.. .|.+.+++..+ -+|. .....+.+.+.||+++++.+ + .+| .|++.+.
T Consensus 18 P~~i~v~~G~~V~~~--n~~~~-~H~~~~~~~~~----~~~~--~~~~~~~~~~~~g~~~~~tf--~-~~G-~y~y~C~ 83 (97)
T 1b3i_A 18 PKALSISAGDTVEFV--MNKVG-PHNVIFDKVPA----GESA--PALSNTKLAIAPGSFYSVTL--G-TPG-TYSFYCT 83 (97)
T ss_dssp SSEEEECTTCEEEEE--ECSSC-CCCBEEEECCT----TSCH--HHHCBCCCCCSCSCCEEEEC--C-SCS-EEEEECS
T ss_pred CCEEEECCCCEEEEE--ECCCC-CeEEEEeCCCC----cccc--ccccccceecCCCCEEEEEe--C-CCe-EEEEEcc
Confidence 468999999998775 76543 44555443221 0110 01113557789999998855 4 567 8988776
No 123
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=91.66 E-value=0.27 Score=39.15 Aligned_cols=63 Identities=17% Similarity=0.134 Sum_probs=42.0
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA 292 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~ 292 (503)
++.+++++|++++| .|.+.. .|.+++++.. ||.. . .++-.|.||+++++-+ + .+| .|++.+..
T Consensus 32 P~~i~v~~Gd~V~~--~N~d~~-~H~v~~~~~~------~g~~--~--~~~~~~~pG~~~~~tf--~-~~G-~y~y~C~~ 94 (105)
T 2ov0_A 32 TPELHVKVGDTVTW--INREAM-PHNVHFVAGV------LGEA--A--LKGPMMKKEQAYSLTF--T-EAG-TYDYHCTP 94 (105)
T ss_dssp SSEEEECTTCEEEE--EECSSS-CBCCEECTTT------SSSS--C--EECCCBCTTEEEEEEE--C-SCE-EEEEECSS
T ss_pred CCEEEECCCCEEEE--EECCCC-CEEEEEcCCC------CCcc--c--ccccccCCCCEEEEEe--C-CCE-EEEEEeCC
Confidence 47899999999877 487753 6777765421 3431 1 1122478999988655 4 467 89998765
No 124
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=90.05 E-value=0.53 Score=36.82 Aligned_cols=69 Identities=13% Similarity=0.104 Sum_probs=42.0
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA 292 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~ 292 (503)
+..+++++|++++|+ |.+.. .|.+.+....+ -+|........+...+.||+++++-+ + .+| .|++.+..
T Consensus 17 P~~i~v~~GdtV~~~--n~~~~-~H~v~~~~~~~----p~g~~~~~~~~~~~~~~~g~~~~~tf--~-~~G-~y~y~C~~ 85 (98)
T 1iuz_A 17 PSKISVAAGEAIEFV--NNAGF-PHNIVFDEDAV----PAGVDADAISYDDYLNSKGETVVRKL--S-TPG-VYGVYCEP 85 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSSC-CEEEEECTTSS----CTTCCHHHHCEEEEECSTTCEEEEEC--C-SCE-EEEEECTT
T ss_pred CCEEEECCCCEEEEE--ECCCC-CEEEEEeCCCC----ccccccccccccccccCCCCEEEEEc--C-CCE-EEEEEchh
Confidence 478999999998875 76643 55555543110 01111111123357899999988755 4 467 89987754
No 125
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=89.95 E-value=0.14 Score=40.42 Aligned_cols=65 Identities=17% Similarity=0.197 Sum_probs=41.4
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCc-------cce-eeecEEEEcCCceEEEEEEeCCCCCc
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSY-------TVQ-QNYTSLDIHVGQSYSFLVTMDQNAST 284 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~-------~~p-~~~d~v~l~pGeR~dvlv~~~~~~g~ 284 (503)
+..+++++|++++|+ |.+.. .|.+.++ ..++.. ..+ ...+.+.+.||+++++.+ + .+|
T Consensus 16 P~~i~v~~G~tV~~~--n~~~~-~H~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf--~-~~G- 81 (102)
T 1kdj_A 16 PDSITVSAGEAVEFT--LVGET-GHNIVFD-------IPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV--S-TPG- 81 (102)
T ss_dssp SSEEEECTTCCEEEE--ECSSS-CBCCEEC-------CCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC--C-SCE-
T ss_pred CCEEEECCCCEEEEE--ECCCC-CeEEEEe-------CcccccccccchhhcccccccceecCCCCEEEEEe--C-CCe-
Confidence 478999999998875 77643 4555554 222321 001 112457789999988854 4 467
Q ss_pred ceEEEEe
Q 010700 285 DYYIVAS 291 (503)
Q Consensus 285 ~y~i~~~ 291 (503)
.|++.+.
T Consensus 82 ~y~y~C~ 88 (102)
T 1kdj_A 82 TYTFYCT 88 (102)
T ss_dssp EEEEECS
T ss_pred EEEEEeC
Confidence 8988776
No 126
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=89.32 E-value=0.22 Score=39.12 Aligned_cols=68 Identities=13% Similarity=0.142 Sum_probs=43.3
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccc--eeeecEEEEcCCceEEEEEEeCCCCCcceEEEE
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTV--QQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVA 290 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~--p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~ 290 (503)
+..+++++|++++| .|.+.. .|.+++++..+ .+|.... ....+.+.+.||+++++.+ + .+| .|++.+
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~-~H~~~~~~~~~----p~g~~~~~~~~~~~~~~~~~G~~~~~~f--~-~~G-~y~~~C 84 (99)
T 1byp_A 16 PSDLSIASGEKITF--KNNAGF-PHNDLFDKKEV----PAGVDVTKISMPEEDLLNAPGEEYSVTL--T-EKG-TYKFYC 84 (99)
T ss_dssp SSEEEECTTEEEEE--EECSSC-CBCCEECTTSS----CTTCCHHHHSCCTTCCBCSTTCEEEEEE--C-SCE-EEEEEC
T ss_pred CCEEEECCCCEEEE--EECCCC-cceEEEeCCCC----ccccccccccccccceeeCCCCEEEEEe--C-CCc-EEEEEc
Confidence 46899999998877 687743 66777665322 1221110 0113446789999988855 4 457 898877
Q ss_pred e
Q 010700 291 S 291 (503)
Q Consensus 291 ~ 291 (503)
.
T Consensus 85 ~ 85 (99)
T 1byp_A 85 A 85 (99)
T ss_dssp G
T ss_pred C
Confidence 6
No 127
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=88.20 E-value=0.32 Score=38.10 Aligned_cols=68 Identities=15% Similarity=0.222 Sum_probs=42.9
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccc--eeeecEEEEcCCceEEEEEEeCCCCCcceEEEE
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTV--QQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVA 290 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~--p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~ 290 (503)
+..+++++|++++| .|.+.. .|.+.+++..+ -+|.... ....+.+.+.||+++++.+ + .+| .|++.+
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~-~H~v~~~~~~~----p~~~~~~~~~~~~~~~~~~~G~~~~~tf--~-~~G-~y~~~C 84 (99)
T 1plc_A 16 PSEFSISPGEKIVF--KNNAGF-PHNIVFDEDSI----PSGVDASKISMSEEDLLNAKGETFEVAL--S-NKG-EYSFYC 84 (99)
T ss_dssp SSEEEECTTCEEEE--EECSSC-CBCCEECTTSS----CTTCCHHHHCCCTTCCBCSTTCEEEEEC--C-SCE-EEEEEC
T ss_pred CCEEEECCCCEEEE--EECCCC-ceEEEEeCCCC----cccccccccccccCccccCCCCEEEEEE--C-CCc-eEEEEc
Confidence 46899999998877 687643 66776665322 1221100 0112346789999988754 4 467 899877
Q ss_pred e
Q 010700 291 S 291 (503)
Q Consensus 291 ~ 291 (503)
.
T Consensus 85 ~ 85 (99)
T 1plc_A 85 S 85 (99)
T ss_dssp G
T ss_pred C
Confidence 6
No 128
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=84.39 E-value=1.1 Score=37.29 Aligned_cols=63 Identities=14% Similarity=0.202 Sum_probs=40.6
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA 292 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~ 292 (503)
+..+++++|++++|+ |.+.. .|.+.+.... +|.. ..++-.+.||+++++.+ + .+| .|++.+..
T Consensus 59 P~~i~V~~GdtV~~~--N~d~~-~H~v~~~~~~------~g~~----~~~s~~l~pG~t~~~tF--~-~~G-~y~y~C~~ 121 (132)
T 3c75_A 59 TPEVTIKAGETVYWV--NGEVM-PHNVAFKKGI------VGED----AFRGEMMTKDQAYAITF--N-EAG-SYDYFCTP 121 (132)
T ss_dssp SSEEEECTTCEEEEE--ECSSS-CBCCEECTTT------SSSS----CEECCCBCTTEEEEEEE--C-SCE-EEEEECSS
T ss_pred CCEEEECCCCEEEEE--ECCCC-ceEEEEeCCC------CCcc----cccccccCCCCEEEEEc--C-CCE-EEEEEeCC
Confidence 478999999999875 87653 5566554322 1110 11233578999988765 4 457 89987754
No 129
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=83.47 E-value=1.4 Score=35.09 Aligned_cols=63 Identities=14% Similarity=0.221 Sum_probs=40.0
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA 292 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~ 292 (503)
+..+++++|++++|+ |.+.. .|.+.+..... |. . ..++-.|.+|+++++-+ + .+| .|++.+..
T Consensus 33 P~~i~V~~G~tV~~~--N~d~~-~H~v~~~~~~~------~~--~--~~~s~~l~~g~~~~~tf--~-~~G-~y~~~C~~ 95 (106)
T 1id2_A 33 TPEVTIKAGETVYWV--NGEVM-PHNVAFKKGIV------GE--D--AFRGEMMTKDQAYAITF--N-EAG-SYDYFCTP 95 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSSS-CBCCEECTTTS------SS--S--CEECCCBCTTEEEEEEE--C-SCE-EEEEECSS
T ss_pred CCEEEECCCCEEEEE--ECCCC-cEEEEEeCCCC------Cc--c--cccccccCCCCEEEEEe--C-CCE-EEEEEeCC
Confidence 478999999998776 77653 55555543220 11 0 11223578999988765 4 457 89887764
No 130
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=81.70 E-value=4.7 Score=41.98 Aligned_cols=62 Identities=19% Similarity=0.279 Sum_probs=48.3
Q ss_pred ceeEEEeCCcEEEEEEeEeCC--CCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEE
Q 010700 213 YETIEVHPGKTYRIRVHNVGI--STSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVA 290 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~--~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~ 290 (503)
+..++|+.|+++||.+-|... .-.|.|.+.++.+. +.+.||+...+.+++++ +| .|+..+
T Consensus 557 P~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK----------------~DaiPGrtnsvtFtadk-PG-vY~y~C 618 (638)
T 3sbq_A 557 VQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS----------------MEISPQQTSSITFVADK-PG-LHWYYC 618 (638)
T ss_dssp CCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECCS-CE-EEEEEC
T ss_pred CCEEEEecCceeEEEEecCCcCCCceeeeEecCCCce----------------eeeCCCCeEEEEEEcCC-CE-EEEEEC
Confidence 468899999999999999742 24677777766433 36889999999999985 57 899987
Q ss_pred ee
Q 010700 291 SA 292 (503)
Q Consensus 291 ~~ 292 (503)
..
T Consensus 619 SE 620 (638)
T 3sbq_A 619 SW 620 (638)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 131
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=79.78 E-value=15 Score=29.86 Aligned_cols=72 Identities=14% Similarity=0.313 Sum_probs=50.4
Q ss_pred CCcEE--EEEEeEeCCCCeeeEEEe-CCcEEEEE--ecCCccc--------eeeecEEEEcCCceEEEEEEeCC--CCCc
Q 010700 220 PGKTY--RIRVHNVGISTSLNFRIQ-NHNLLLAE--TEGSYTV--------QQNYTSLDIHVGQSYSFLVTMDQ--NAST 284 (503)
Q Consensus 220 ~G~~~--rlRliN~g~~~~~~~~i~-gh~~~via--~DG~~~~--------p~~~d~v~l~pGeR~dvlv~~~~--~~g~ 284 (503)
.|+.+ .|.+.|.+.. ...+.+. |+++.++- .+|..+- .+......|.|||...+-...++ .+|
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG- 93 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPG- 93 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSE-
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCc-
Confidence 45544 5778898876 6677764 66655554 4576553 23456899999999999999985 356
Q ss_pred ceEEEEeee
Q 010700 285 DYYIVASAR 293 (503)
Q Consensus 285 ~y~i~~~~~ 293 (503)
.|.+.+...
T Consensus 94 ~Ytl~a~l~ 102 (120)
T 3isy_A 94 TYEVKVTFK 102 (120)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEEEE
Confidence 999977554
No 132
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=78.82 E-value=6.1 Score=32.84 Aligned_cols=59 Identities=17% Similarity=0.363 Sum_probs=43.8
Q ss_pred eeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 010700 214 ETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA 292 (503)
Q Consensus 214 ~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~ 292 (503)
..+.++.|+++||++-|.. -.|.|.+.+..+. +.+.||+.-.+.+++++ +| .|+..++-
T Consensus 60 ~~l~Vp~G~~V~~~vts~D--V~Hsf~ip~~~~k----------------~d~~PG~~~~~~~~~~~-~G-~y~~~C~e 118 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD--VIHGFHVEGTNIN----------------VEVLPGEVSTVRYTFKR-PG-EYRIICNQ 118 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS--SCEEEEETTSSCE----------------EEECBTBCEEEEEECCS-CE-EEEEECCS
T ss_pred CEEEEcCCCEEEEEEEeCC--ccceEEecCCCce----------------eEeCCCCcEEEEEEcCC-CE-EEEEECcc
Confidence 4689999999999998864 3666766554332 45678988888888884 57 89887753
No 133
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=75.71 E-value=7.2 Score=34.86 Aligned_cols=74 Identities=11% Similarity=-0.042 Sum_probs=52.5
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCc-hhhhhc
Q 010700 58 PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL-HFQRAS 136 (503)
Q Consensus 58 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~-~~q~~~ 136 (503)
..|.+..|+.|++.+++. +.-++...-.+.. +.-+-||..-...|.+ +++|+|+..|.- -...-.
T Consensus 41 n~l~lP~g~~V~~~lTS~-DViHSF~IP~lgv------------K~daiPGr~n~l~~~~-~~pG~y~g~CsE~CG~~Hs 106 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN-SVMHSFFIPRLGS------------QIYAMAGMQTRLHLIA-NEPGTYDGICAEICGPGHS 106 (205)
T ss_dssp SEEEEETTSCEEEEEEES-SSCEEEEEGGGTE------------EEEECTTCCEEEEECC-SSSEEEEEEECSCCSTTST
T ss_pred ceEEEeCCCEEEEEEecC-CceeeEEecccCc------------EEEecCCceEEEEEEe-CCCeEEEEEcccccccchh
Confidence 479999999999999987 4444444443321 2235689989999988 689999999973 222334
Q ss_pred CceeeEEEE
Q 010700 137 GGFGGFIIN 145 (503)
Q Consensus 137 Gl~G~liV~ 145 (503)
.|.+.++|.
T Consensus 107 ~M~~~v~vv 115 (205)
T 1cyx_A 107 GMKFKAIAT 115 (205)
T ss_dssp TCCEEEEEE
T ss_pred hceEEEEEE
Confidence 578888887
No 134
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=74.45 E-value=1.4 Score=36.24 Aligned_cols=61 Identities=15% Similarity=0.233 Sum_probs=37.8
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA 292 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~ 292 (503)
+..+++++|++|+|.+-|. .|.+.++. +. .|.....+.+.||+.+++-+ + .+| .|+..+..
T Consensus 20 P~~i~V~~GdtV~f~~~~~----~H~v~~~~---------~~--~P~g~~~f~~~pg~t~s~TF--~-~pG-~y~y~C~~ 80 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDK----SHNVEAIK---------EI--LPEGVESFKSKINESYTLTV--T-EPG-LYGVKCTP 80 (123)
T ss_dssp SSEEEECTTEEEEEEESST----TCCCEECT---------TS--SCTTCCCCBCCTTCCEEEEE--C-SCE-EEEEECGG
T ss_pred CCEEEECCCCEEEEEECCC----CceEEEcC---------Cc--CCCCccceecCCCCEEEEEe--C-CCe-EEEEEeCC
Confidence 4789999999999887662 23333321 10 01111233457999888776 4 457 89998764
No 135
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=73.01 E-value=36 Score=27.54 Aligned_cols=75 Identities=8% Similarity=0.050 Sum_probs=48.8
Q ss_pred CceeEEEEEcCCCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCC----CCCCCCCceEEEEEeC
Q 010700 43 GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN----CPIPPKWNWTYQFQVK 118 (503)
Q Consensus 43 G~~~~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q----~~i~PG~~~~y~f~~~ 118 (503)
.....+-..|-.--.=+|+...|.+..+.|.+...+ ..| -|+||-..+| ..|+||++.+|+...+
T Consensus 19 ~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~ 87 (120)
T 3isy_A 19 QIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWK 87 (120)
T ss_dssp CEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEES
T ss_pred eEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeC
Confidence 344455555654434578888888888888875221 111 2466655333 4489999999999996
Q ss_pred C--CceeeEEcc
Q 010700 119 D--QVGSFFYFP 128 (503)
Q Consensus 119 ~--~~Gt~wyH~ 128 (503)
+ .+|+|..+.
T Consensus 88 ~~~~pG~Ytl~a 99 (120)
T 3isy_A 88 EVPEPGTYEVKV 99 (120)
T ss_dssp SCCCSEEEEEEE
T ss_pred CCCCCccEEEEE
Confidence 3 489997764
No 136
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=71.55 E-value=11 Score=32.49 Aligned_cols=59 Identities=17% Similarity=0.365 Sum_probs=45.3
Q ss_pred eeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 010700 214 ETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA 292 (503)
Q Consensus 214 ~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~ 292 (503)
..+.++.|+.+||++-|. .-.|.|.+.+..++ +.+.||+.-.+.+.+++ +| .|+..+.-
T Consensus 93 n~l~VP~G~~Vr~~vTS~--DViHsf~IP~lgik----------------~da~PG~~n~~~~~~~k-pG-~y~g~Cse 151 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP--DVIHGFHVEGTNIN----------------VEVLPGEVSTVRYTFKR-PG-EYRIICNQ 151 (168)
T ss_dssp SSEEEETTSEEEEEEECS--SSCEEEEETTSSCE----------------EEECTTBCEEEEEECCS-CE-EEEEECCS
T ss_pred CEEEEeCCCeEEEEEecC--CceEEEEECCCCeE----------------EEecCCceeEEEEEeCC-CE-EEEEECCc
Confidence 468899999999999885 34778888765432 34668988888898885 57 89988764
No 137
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=64.29 E-value=22 Score=33.78 Aligned_cols=76 Identities=20% Similarity=0.044 Sum_probs=53.4
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCc-hhhhhc
Q 010700 58 PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL-HFQRAS 136 (503)
Q Consensus 58 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~-~~q~~~ 136 (503)
..|.+..|+.|++.+++. +.-++.....+..+ +| +-||..-...|.+ +++|+|...|.. -.....
T Consensus 189 N~lvlP~g~~V~~~ltS~-DViHsf~iP~lg~k----~d--------aiPG~~n~~~~~~-~~~G~y~g~CsE~CG~~Hs 254 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT-DVIHAWTIPAFAVK----QD--------AVPGRIAQLWFSV-DQEGVYFGQCSELCGINHA 254 (298)
T ss_dssp SCEEEESSSEEEEEEEES-SSCEEEEEGGGTEE----EE--------ECTTCCEEEEEEC-SSSEEEEECCCSCCSTTTT
T ss_pred ceEEEEcCCEEEEEEEeC-CccceeeEcccCce----EE--------ecCCceEEEEEEe-CCCEEEEEEcccccCcCcc
Confidence 589999999999999995 34444444433221 23 4678888889998 689999999983 222334
Q ss_pred CceeeEEEEeC
Q 010700 137 GGFGGFIINNR 147 (503)
Q Consensus 137 Gl~G~liV~~~ 147 (503)
.|.+.+.|.++
T Consensus 255 ~M~~~v~vvs~ 265 (298)
T 3hb3_B 255 YMPIVVKAVSQ 265 (298)
T ss_dssp SCCEEEEEECH
T ss_pred CCeeEEEEEcH
Confidence 47777777764
No 138
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=63.60 E-value=22 Score=33.16 Aligned_cols=76 Identities=20% Similarity=0.059 Sum_probs=52.6
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCc-hhhhhc
Q 010700 58 PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL-HFQRAS 136 (503)
Q Consensus 58 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~-~~q~~~ 136 (503)
..|.+..|+.|++.+++. +.-++...-.+..+ +| +-||..-...|.+ +++|+|...|.- -.....
T Consensus 171 n~l~lP~g~~v~~~~tS~-DViHsf~ip~l~~k----~d--------a~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H~ 236 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVIHSWTVPAFGVK----QD--------AVPGRLAQLWFRA-EREGIFFGQCSELCGISHA 236 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSCEEEEEGGGTEE----EE--------ECBTCCEEEEEEC-CSCEEEEECCCSCCSTTGG
T ss_pred ceEEEecCCEEEEEEEEC-cccceeeecccCce----EE--------ecCCceeEEEEec-CCcEEEEEEChHhcccCcc
Confidence 479999999999999987 44444444443221 23 4578888888988 789999999973 122223
Q ss_pred CceeeEEEEeC
Q 010700 137 GGFGGFIINNR 147 (503)
Q Consensus 137 Gl~G~liV~~~ 147 (503)
.|.+.+.|.++
T Consensus 237 ~M~~~v~vv~~ 247 (262)
T 2gsm_B 237 YMPITVKVVSE 247 (262)
T ss_dssp GCCEEEEEECH
T ss_pred cCeEEEEEEcH
Confidence 47777777654
No 139
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=62.44 E-value=6.3 Score=32.09 Aligned_cols=61 Identities=13% Similarity=0.214 Sum_probs=36.2
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA 292 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~ 292 (503)
+..+++++|++|+|+ |.+. .|.+.+.... --+| ...+.+.+|+++.+-+ + .+| .|++.+..
T Consensus 20 P~~i~V~~GdtV~f~--n~d~--~H~v~~~~~~----~p~~-------~~~~~~~~g~t~~~tF--~-~~G-~y~y~C~~ 80 (122)
T 2ux6_A 20 PASLKVAPGDTVTFI--PTDK--GHNVETIKGM----IPDG-------AEAFKSKINENYKVTF--T-APG-VYGVKCTP 80 (122)
T ss_dssp SSEEEECTTEEEEEE--ESSS--SCCCEECTTC----SCTT-------CCCCBCCTTCCEEEEE--C-SCE-EEEEEETT
T ss_pred CCEEEECCCCEEEEE--ECCC--CcEEEEcccc----cCCC-------cceeecCCCCEEEEEe--C-CCE-EEEEEeCC
Confidence 478999999998876 4432 3344333210 0011 1123456899877665 4 457 89998865
No 140
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=62.33 E-value=3.2 Score=34.25 Aligned_cols=61 Identities=13% Similarity=0.208 Sum_probs=37.0
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA 292 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~ 292 (503)
+..+++++|++|+|.+-|. .|.+.++... .-|| ...+.+.||+.+++-+ + .+| .|+..+..
T Consensus 22 P~~i~V~~GDtVtf~n~~~----~H~v~~~~~~----~P~g-------~~~f~s~pGet~s~TF--~-~pG-~y~y~C~~ 82 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK----GHNSALMKGG----APEG-------AETWKGKINEEITVTL--S-KPG-VYMYQCAP 82 (127)
T ss_dssp SSEEEECTTCEEEEECSSS----SCCCEECTTC----SCTT-------CCCCBCCTTCCCEEEC--C-SCE-EEEEECTT
T ss_pred CCEEEECCCCEEEEEECCC----CceEEEccCc----CCCC-------ccceecCCCCEEEEEe--C-CCe-EEEEEeCC
Confidence 4789999999998877652 2333332110 0111 1223446899877666 4 467 89998763
No 141
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=58.19 E-value=19 Score=28.86 Aligned_cols=47 Identities=13% Similarity=0.328 Sum_probs=31.6
Q ss_pred cEEEEEEeEeCCC-CeeeEEEeCC-cEEEEEecCCccceeeecEEEEcCCceEEEEEEe
Q 010700 222 KTYRIRVHNVGIS-TSLNFRIQNH-NLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTM 278 (503)
Q Consensus 222 ~~~rlRliN~g~~-~~~~~~i~gh-~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~ 278 (503)
-.|+|+|+|.+.. ..+.+++.|. .++++. + ..+.+.|||..++-|..
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEES-------C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEeC-------C---CcEEECCCCEEEEEEEE
Confidence 4689999999976 4566667664 233322 1 14899999977766654
No 142
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=57.57 E-value=4.7 Score=32.96 Aligned_cols=61 Identities=16% Similarity=0.244 Sum_probs=35.3
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA 292 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~ 292 (503)
+..+++++|++|+|..-+ . +|.+... ++. .|.....+.+.||+++.+-+ + .+| .|++.+..
T Consensus 20 P~~i~V~~GdtV~f~n~~--~---------~H~v~~~--~~~--~p~~~~~~~~~pG~t~~~tF--~-~~G-~y~y~C~~ 80 (123)
T 1pmy_A 20 PALVRLKPGDSIKFLPTD--K---------GHNVETI--KGM--APDGADYVKTTVGQEAVVKF--D-KEG-VYGFKCAP 80 (123)
T ss_dssp SSEEEECTTCEEEEECSS--S---------SCCCEEC--TTS--SCTTCCCCBCCTTSCEEEEC--C-SCE-EEEEECST
T ss_pred CCEEEECCCCEEEEEECC--C---------CcEEEEe--ccc--CCCCccceecCCCCEEEEEe--C-CCe-EEEEEeCC
Confidence 478999999998875443 2 3444332 110 01001123457999877655 5 457 89998763
No 143
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=57.55 E-value=8.2 Score=31.70 Aligned_cols=49 Identities=16% Similarity=0.229 Sum_probs=30.2
Q ss_pred EEEEEeCCCCCe---eEEEccCCCCC---CCCCCCCCCCCCCCCCCCceEEEEEe
Q 010700 69 VVNVRNKLDESL---LIHWSGIQQRR---SSWQDGLLGTNCPIPPKWNWTYQFQV 117 (503)
Q Consensus 69 ~v~v~N~l~~~~---siH~HG~~~~~---~~~~DG~~~~q~~i~PG~~~~y~f~~ 117 (503)
+|++.|....+. +=||.=.+..+ .-..+||-|.|.-|.||++|+|.=-.
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg~ 88 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTSGV 88 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEeCCc
Confidence 477778766553 45776322111 11256666677789999998886433
No 144
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=57.37 E-value=5.8 Score=32.40 Aligned_cols=61 Identities=15% Similarity=0.263 Sum_probs=34.7
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA 292 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~ 292 (503)
+..+++++|++|+|..-+ . +|.+...+ +-. |.....+...||+.+.+-+ + .+| .|++.+..
T Consensus 20 P~~i~V~~GdtV~f~~~~--~---------~H~v~~~~-~~~---p~~~~~~~~~pG~t~~~tF--~-~~G-~y~y~C~~ 80 (123)
T 1paz_A 20 PAYIKANPGDTVTFIPVD--K---------GHNVESIK-DMI---PEGAEKFKSKINENYVLTV--T-QPG-AYLVKCTP 80 (123)
T ss_dssp SSEEEECTTCEEEEEESS--S---------SCCCEECT-TCS---CTTCCCCBCCTTCCEEEEC--C-SCE-EEEEECTT
T ss_pred CCEEEECCCCEEEEEECC--C---------CeEEEEec-ccC---CCCccceecCCCCEEEEEe--C-CCE-EEEEEeCC
Confidence 478999999998876443 2 24443211 000 0001123346999877555 5 457 89997753
No 145
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=55.40 E-value=5.8 Score=32.51 Aligned_cols=61 Identities=11% Similarity=0.098 Sum_probs=37.1
Q ss_pred ceeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 010700 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA 292 (503)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~ 292 (503)
+..+++++|++|+|..- + ..|.+.++ ++. .|...+.+.+.||+.+++-| + .+| .|+..+..
T Consensus 21 P~~i~V~~GDTV~f~n~--~--~~Hnv~~~---------~~~--~p~g~~~~~~~pg~t~s~TF--~-~~G-~y~Y~C~~ 81 (124)
T 3ef4_A 21 PGFVKVEAGDTVKFVPT--D--KSHNAESV---------REV--WPEGVAPVKGGFSKEVVFNA--E-KEG-LYVLKCAP 81 (124)
T ss_dssp SSEEEECTTCEEEEECS--S--SSCCCEEC---------TTT--SCTTSCCCBCCTTCCEEEEC--C-SSE-EEEEECTT
T ss_pred CCEEEECCCCEEEEEEC--C--CCccEEEe---------CCc--CCCCccccccCCCCEEEEEe--C-CCe-EEEEEcCC
Confidence 47899999999877643 3 23333332 111 01112234567999988766 4 457 89997764
No 146
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=54.59 E-value=8.5 Score=31.58 Aligned_cols=49 Identities=16% Similarity=0.278 Sum_probs=30.0
Q ss_pred EEEEEeCCCCCe---eEEEccCCCCC---CCCCCCCCCCCCCCCCCCceEEEEEe
Q 010700 69 VVNVRNKLDESL---LIHWSGIQQRR---SSWQDGLLGTNCPIPPKWNWTYQFQV 117 (503)
Q Consensus 69 ~v~v~N~l~~~~---siH~HG~~~~~---~~~~DG~~~~q~~i~PG~~~~y~f~~ 117 (503)
+|++.|....+. +=||.=....+ .-..+||-|.|.-|.||++|+|.=-.
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg~ 87 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSGT 87 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeCCc
Confidence 477778766553 45776322111 11246666677789999999886443
No 147
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=52.99 E-value=11 Score=31.39 Aligned_cols=49 Identities=16% Similarity=0.231 Sum_probs=30.0
Q ss_pred EEEEEeCCCCCe---eEEEccCCCCC---CCCCCCCCCCCCCCCCCCceEEEEEe
Q 010700 69 VVNVRNKLDESL---LIHWSGIQQRR---SSWQDGLLGTNCPIPPKWNWTYQFQV 117 (503)
Q Consensus 69 ~v~v~N~l~~~~---siH~HG~~~~~---~~~~DG~~~~q~~i~PG~~~~y~f~~ 117 (503)
+|++.|....+. +=||.=....+ ....+||-|.|.-|.||++|.|.=-.
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~YtSg~ 92 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYTSGC 92 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEcCCc
Confidence 467777766553 45775332211 11246666677779999999886543
No 148
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=52.38 E-value=41 Score=30.49 Aligned_cols=76 Identities=9% Similarity=-0.124 Sum_probs=51.8
Q ss_pred CceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCc--hhhh
Q 010700 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL--HFQR 134 (503)
Q Consensus 57 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~--~~q~ 134 (503)
...+.+..|..|++.++.. +.-++.....+.. .+| .-||..-...|.+ +++|+|+..|.. +..
T Consensus 139 dn~lvlP~~~~Vr~~vtS~-DViHsf~vP~lg~----K~D--------aiPGr~n~~~~~~-~~~G~y~g~Cse~CG~~- 203 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSE-DVLHSWAVPSLGL----KTD--------AIPGRLNQTTLMS-SRPGLYYGQCSEICGSN- 203 (227)
T ss_dssp SSCEEEETTSCEEEEEEES-SSCEEEEEGGGTE----EEE--------ECTTCCEEEEECC-SSCEEEEECCCSCCSTT-
T ss_pred CceEEEecCCEEEEEEEeC-cccceeeecccCc----EEE--------ecCCceEEEEEec-CCcEEEEEEehhhcccc-
Confidence 3689999999999999985 4445554444422 234 3568888888887 789999999973 222
Q ss_pred hcCceeeEEEEeC
Q 010700 135 ASGGFGGFIINNR 147 (503)
Q Consensus 135 ~~Gl~G~liV~~~ 147 (503)
..-|.+.+.+.++
T Consensus 204 Hs~M~~~v~vv~~ 216 (227)
T 1v54_B 204 HSFMPIVLELVPL 216 (227)
T ss_dssp GGGCCEEEEEECH
T ss_pred cccCeEEEEEEcH
Confidence 2236666666553
No 149
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=49.46 E-value=16 Score=35.26 Aligned_cols=19 Identities=26% Similarity=0.405 Sum_probs=16.1
Q ss_pred CCCCCCCCCceEEEEEeCC
Q 010700 101 TNCPIPPKWNWTYQFQVKD 119 (503)
Q Consensus 101 ~q~~i~PG~~~~y~f~~~~ 119 (503)
...||+|||+.+.+.++.|
T Consensus 318 d~~pI~PGETr~~~v~a~d 336 (382)
T 1yew_A 318 DNSPLAPGETRTVDVTASD 336 (382)
T ss_dssp CCSCBCTTCEEEEEEEEEC
T ss_pred CCCCcCCCceeEEEEEeeh
Confidence 3578999999999999853
No 150
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=48.09 E-value=9.9 Score=31.51 Aligned_cols=49 Identities=18% Similarity=0.336 Sum_probs=29.7
Q ss_pred EEEEEeCCCCCe---eEEEccCCCCC---CCCCCCCCCCCCCCCCCCceEEEEEe
Q 010700 69 VVNVRNKLDESL---LIHWSGIQQRR---SSWQDGLLGTNCPIPPKWNWTYQFQV 117 (503)
Q Consensus 69 ~v~v~N~l~~~~---siH~HG~~~~~---~~~~DG~~~~q~~i~PG~~~~y~f~~ 117 (503)
+|++.|....+. +=||.=....+ ....+||-|.|.-|.||++|+|.=-.
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~YtSg~ 87 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTSGT 87 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEcCCc
Confidence 466677766553 44775322111 11246666677789999999886543
No 151
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=47.48 E-value=25 Score=28.75 Aligned_cols=62 Identities=6% Similarity=0.107 Sum_probs=35.8
Q ss_pred CceEEEecCCEEEEEEEeCCC---CCee--EE--EccCCCCC-CCCCCCCCCCCCCCCCCCceEEEEEeC
Q 010700 57 GPTINVTTNNNVVVNVRNKLD---ESLL--IH--WSGIQQRR-SSWQDGLLGTNCPIPPKWNWTYQFQVK 118 (503)
Q Consensus 57 gP~i~~~~Gd~v~v~v~N~l~---~~~s--iH--~HG~~~~~-~~~~DG~~~~q~~i~PG~~~~y~f~~~ 118 (503)
.+.=.++.|..+.+.+.=..+ ...+ +| ..|+...- ....|+=.+..|||.+|+.++|.+..+
T Consensus 24 ~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 24 SDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHFMKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp TSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGTSCSSBCTTCEEEEEEEEE
T ss_pred CCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCCccCcccCCEEEEEEEEeE
Confidence 345667788888887772222 2222 33 23443321 112233222689999999999997774
No 152
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=43.44 E-value=28 Score=28.43 Aligned_cols=61 Identities=23% Similarity=0.295 Sum_probs=35.9
Q ss_pred ceEEEecCCEEEEEEE---eCCCCCeeEEEc----cCCCC-CCCCCCCCC-CCCCCCCCCCceEEEEEeC
Q 010700 58 PTINVTTNNNVVVNVR---NKLDESLLIHWS----GIQQR-RSSWQDGLL-GTNCPIPPKWNWTYQFQVK 118 (503)
Q Consensus 58 P~i~~~~Gd~v~v~v~---N~l~~~~siH~H----G~~~~-~~~~~DG~~-~~q~~i~PG~~~~y~f~~~ 118 (503)
+.=.++.|..+.+.+. |..........| |+... ..+..|+=. +..|||.+|+.++|.+.++
T Consensus 26 ~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 26 QPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp SSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred CCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 4566778888887776 222222223333 33321 112234432 3689999999999998885
No 153
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=40.59 E-value=1.2e+02 Score=24.78 Aligned_cols=65 Identities=14% Similarity=0.183 Sum_probs=39.6
Q ss_pred CceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCC--------CCCCCCCCCCCceEEEEEeCCCceee
Q 010700 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGL--------LGTNCPIPPKWNWTYQFQVKDQVGSF 124 (503)
Q Consensus 57 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~--------~~~q~~i~PG~~~~y~f~~~~~~Gt~ 124 (503)
|-+|.++.||++.|.|.-+-....+-...... +..-.|++ |.....+..|+...+.|++. ++|+.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTGY~W~~~~~~--~~~L~~~~~~v~~~y~p~~~~~vGagG~~~w~f~A~-~~G~~ 104 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTGFAWYFEGGT--KESPNESMFTVENKYFPPDSKLLGAGGTEHFHVTVK-AAGTH 104 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGSCEEEBTTTB--SSCSCTTTEEEEEEEECCTTCCTTCCEEEEEEEEEC-SSEEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCCeEEEEecCC--CccccccceeecceeeeCCCCCcCCCcEEEEEEEEc-cCceE
Confidence 56899999999999999775444444443321 11112322 11112355678888888884 67864
No 154
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=39.00 E-value=88 Score=27.77 Aligned_cols=60 Identities=10% Similarity=0.100 Sum_probs=43.6
Q ss_pred eeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEeee
Q 010700 214 ETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (503)
Q Consensus 214 ~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~~ 293 (503)
..+.+..|+.+||+|-+.. -.|.|.|.....++ ..-||..-.+-+.+++ +| .|+.+++-.
T Consensus 41 n~l~lP~g~~V~~~lTS~D--ViHSF~IP~lgvK~----------------daiPGr~n~l~~~~~~-pG-~y~g~CsE~ 100 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS--VMHSFFIPRLGSQI----------------YAMAGMQTRLHLIANE-PG-TYDGICAEI 100 (205)
T ss_dssp SEEEEETTSCEEEEEEESS--SCEEEEEGGGTEEE----------------EECTTCCEEEEECCSS-SE-EEEEEECSC
T ss_pred ceEEEeCCCEEEEEEecCC--ceeeEEecccCcEE----------------EecCCceEEEEEEeCC-Ce-EEEEEcccc
Confidence 4688999999999998754 36778887665543 3446777777777774 57 899888643
No 155
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=38.97 E-value=48 Score=32.41 Aligned_cols=52 Identities=17% Similarity=0.238 Sum_probs=0.0
Q ss_pred EEEEEEEeCCCCCee---EEEccCCCCCCCC-------------CCCCCCCCCCCCCCCceEEEEEeCC
Q 010700 67 NVVVNVRNKLDESLL---IHWSGIQQRRSSW-------------QDGLLGTNCPIPPKWNWTYQFQVKD 119 (503)
Q Consensus 67 ~v~v~v~N~l~~~~s---iH~HG~~~~~~~~-------------~DG~~~~q~~i~PG~~~~y~f~~~~ 119 (503)
++.++|+|+.+.+.. .-.-|+++..... .+|.. +..||+|||+.+.+.++.|
T Consensus 301 ~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~pI~PGETrt~~V~a~d 368 (419)
T 3rfr_A 301 TINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDDVIAPGESKEIVVKIQD 368 (419)
T ss_dssp EEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCCCBCTTCEEEEEEEEEC
T ss_pred EEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCCCcCCCcceEEEEEeeh
No 156
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=34.79 E-value=36 Score=27.27 Aligned_cols=36 Identities=8% Similarity=0.175 Sum_probs=28.1
Q ss_pred EEEEeCCCceeeEEccCchhhhhcCceeeE-EEEeCCC
Q 010700 113 YQFQVKDQVGSFFYFPSLHFQRASGGFGGF-IINNRAI 149 (503)
Q Consensus 113 y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~l-iV~~~~~ 149 (503)
..+++ +.+|++||-|-...+=..||...| .|.....
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~~ 108 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAGGA 108 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC---
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCCCC
Confidence 46777 579999999998878788999999 8876543
No 157
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=31.96 E-value=36 Score=26.18 Aligned_cols=70 Identities=16% Similarity=0.183 Sum_probs=35.7
Q ss_pred EeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCC--CCcceEEEEee
Q 010700 218 VHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQN--ASTDYYIVASA 292 (503)
Q Consensus 218 v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~--~g~~y~i~~~~ 292 (503)
.+||+++++|++-.... .....-.--.+++...+|..+... .........++.-+.+++. .| .|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~-~~p~~~~~~~v~l~dp~g~~v~~~---~~~~~~~G~~~~~f~Lp~~~~~G-~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDEN-FHPLNELIPLVYIQDPKGNRIAQW---QSFQLEGGLKQFSFPLSSEPFQG-SYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGG-GCBCCCEEEEEEEECTTSCEEEEE---EEEECBTTEEEEEEECCSSCCCE-EEEEEEEC
T ss_pred cCCCCEEEEEEEEECCC-CcCCCCCceEEEEECCCCCEEEEE---EeecCCCCEEEEEEECCCCCCCe-eEEEEEEE
Confidence 68999999998765332 111100001344555556543211 1122233456666666543 35 88887754
No 158
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=29.06 E-value=59 Score=25.35 Aligned_cols=52 Identities=15% Similarity=0.081 Sum_probs=34.1
Q ss_pred EEEEEEEeCCCCC---eeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEe-CCCcee
Q 010700 67 NVVVNVRNKLDES---LLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQV-KDQVGS 123 (503)
Q Consensus 67 ~v~v~v~N~l~~~---~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~-~~~~Gt 123 (503)
.++|.|+|-|+.+ ..++..|.-. ..+.-.....|.||++..+++.. |..+|.
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~GL-----~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~ 78 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGSGL-----QRPKILNVGDIGGNETVTLRQSFVPVRPGP 78 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEETTT-----EEEEEEEECCBCTTCEEEEEEEECCCSCSS
T ss_pred EEEEEEECCCCCcccCEEEEEECCCC-----CcceEEEcCcCCCCCEEEEEEEEecCcccc
Confidence 5678899999865 4577777422 11110112459999999999988 345675
No 159
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=27.90 E-value=2.4e+02 Score=22.87 Aligned_cols=70 Identities=9% Similarity=0.057 Sum_probs=40.1
Q ss_pred CCCCceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCC-CCCCCCC--CC--CCCCCCCCCceEEEEEeCCCceee
Q 010700 54 KFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRR-SSWQDGL--LG--TNCPIPPKWNWTYQFQVKDQVGSF 124 (503)
Q Consensus 54 ~~pgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~-~~~~DG~--~~--~q~~i~PG~~~~y~f~~~~~~Gt~ 124 (503)
.--|-+|.++.||++.|.|.-+-....+-......-.. ..-.|-. +. ....+..|+...+.|++. ++|+.
T Consensus 31 ~~~g~tI~v~~Ge~~~I~L~~NPTTGY~W~~~~~~~~vl~~l~~~~y~~~~~~~~~vGagG~~~w~f~A~-~~G~~ 105 (132)
T 2wgn_B 31 ADDCSPLKLTQGQELVLTLPSNPTTGFRWELRNPAASVLKRLGPEVYSNSEEDSGLVGSGGESTWRFRVA-ASGDD 105 (132)
T ss_dssp SSCCSCEEECTTCEEEEEECCCTTTSCEEEEEECCTTTEEECCSCCSCSSCSSCCCSSSSCCEEEEEEEC-SCEEE
T ss_pred ccCCcEEEEcCCCEEEEEeCCCCCCCeEEEEecCCCceEEecccceecCCCCccCCcCCCceEEEEEEEc-CCceE
Confidence 33466899999999999998765555444433221000 0001110 00 112355678899999995 68864
No 160
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=26.50 E-value=23 Score=27.52 Aligned_cols=24 Identities=13% Similarity=0.047 Sum_probs=21.3
Q ss_pred EEEEEcCCCCCceEEEecCCEEEE
Q 010700 47 QVIAINGKFPGPTINVTTNNNVVV 70 (503)
Q Consensus 47 ~~~~~Ng~~pgP~i~~~~Gd~v~v 70 (503)
..+.+||+.-.+.-.++.||+|+|
T Consensus 59 ~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 59 NKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp SEEEEEECSCCTTCBCCTTCEEEE
T ss_pred cEEEEcCEECCCCccCCCCCEEEE
Confidence 468999998878888999999998
No 161
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=25.86 E-value=26 Score=28.67 Aligned_cols=20 Identities=20% Similarity=0.293 Sum_probs=16.8
Q ss_pred eeEEEeCCcEEEEEEeEeCC
Q 010700 214 ETIEVHPGKTYRIRVHNVGI 233 (503)
Q Consensus 214 ~~~~v~~G~~~rlRliN~g~ 233 (503)
-.++|+.||++||.+.|-+.
T Consensus 71 k~InV~~GETVrF~v~nkt~ 90 (131)
T 2wtp_A 71 RYVNVDSGETVAFRAGEKIV 90 (131)
T ss_dssp CEEEEETTCEEEEEETTEEE
T ss_pred eEEEecCCCEEEEEeCCcEE
Confidence 34999999999999988554
No 162
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=25.83 E-value=2.5e+02 Score=22.20 Aligned_cols=66 Identities=5% Similarity=0.018 Sum_probs=40.2
Q ss_pred CceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCC---------CCCCCCCCCceEEEEEeCCCcee
Q 010700 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG---------TNCPIPPKWNWTYQFQVKDQVGS 123 (503)
Q Consensus 57 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~---------~q~~i~PG~~~~y~f~~~~~~Gt 123 (503)
|-+|.++.||++.|.|.-+-....+-......-...-..+|... ....+..|+...+.|++. .+|+
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a~-~~G~ 88 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKPR-KRGH 88 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEEC-SSSS
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEEe-CCce
Confidence 45899999999999999876666665555421000001122110 012255678889999984 6775
No 163
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=24.31 E-value=69 Score=25.85 Aligned_cols=59 Identities=17% Similarity=0.286 Sum_probs=37.6
Q ss_pred eEEEecC-CEEEEEEEeCCCCCeeE--EEccCCCCCCCCCC-----C----CC-CCCCCCCCCCceEEEEEe
Q 010700 59 TINVTTN-NNVVVNVRNKLDESLLI--HWSGIQQRRSSWQD-----G----LL-GTNCPIPPKWNWTYQFQV 117 (503)
Q Consensus 59 ~i~~~~G-d~v~v~v~N~l~~~~si--H~HG~~~~~~~~~D-----G----~~-~~q~~i~PG~~~~y~f~~ 117 (503)
.|++++| ++++|+|.|..++|.-+ |+|=.+....-..| | .| +|..-.+||++.+.+...
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 5777888 78999999999888654 66644332211122 1 12 244456888888887764
No 164
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=24.31 E-value=69 Score=25.85 Aligned_cols=59 Identities=17% Similarity=0.286 Sum_probs=37.6
Q ss_pred eEEEecC-CEEEEEEEeCCCCCeeE--EEccCCCCCCCCCC-----C----CC-CCCCCCCCCCceEEEEEe
Q 010700 59 TINVTTN-NNVVVNVRNKLDESLLI--HWSGIQQRRSSWQD-----G----LL-GTNCPIPPKWNWTYQFQV 117 (503)
Q Consensus 59 ~i~~~~G-d~v~v~v~N~l~~~~si--H~HG~~~~~~~~~D-----G----~~-~~q~~i~PG~~~~y~f~~ 117 (503)
.|++++| ++++|+|.|..++|.-+ |+|=.+....-..| | .| +|..-.+||++.+.+...
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 5777888 78999999999888654 66644332211122 1 12 244456888888887764
No 165
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=22.88 E-value=54 Score=31.32 Aligned_cols=74 Identities=11% Similarity=-0.047 Sum_probs=50.2
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEEEEEeCCCceeeEEccCc-hhhhhc
Q 010700 58 PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL-HFQRAS 136 (503)
Q Consensus 58 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y~f~~~~~~Gt~wyH~H~-~~q~~~ 136 (503)
..|.+..|..|++.++.. +.-++...-.+.. .+| +-||..-...|.+ +++|+|+..|.- -.....
T Consensus 151 n~l~lP~g~~V~~~lTS~-DViHsf~IP~lg~----k~D--------aiPGr~n~~~~~~-~~~G~y~g~CsE~CG~~Hs 216 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN-SVMNSFFIPRLGS----QIY--------AMAGMQTRLHLIA-NEPGTYDGISASYSGPGFS 216 (315)
T ss_dssp SBCCCCSSSEEEEEECBS-SSCEEEEEGGGTE----EEE--------ECBTSCEEEEEEC-CSCBCCEEBCCSCCSTTTT
T ss_pred ceEEEeCCCEEEEEEEeC-CccceeeecccCc----EEe--------ecCCcceeeEEec-CCCeEEEEeccccchhhHH
Confidence 468889999999999866 4444444444322 133 4578888888988 789999999972 122233
Q ss_pred CceeeEEEE
Q 010700 137 GGFGGFIIN 145 (503)
Q Consensus 137 Gl~G~liV~ 145 (503)
.|.+.++|.
T Consensus 217 ~M~~~v~vv 225 (315)
T 1fft_B 217 GMKFKAIAT 225 (315)
T ss_dssp TCCEECCBC
T ss_pred hccceEEEe
Confidence 477777776
No 166
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=22.56 E-value=2.5e+02 Score=22.33 Aligned_cols=65 Identities=9% Similarity=0.093 Sum_probs=38.5
Q ss_pred CceEEEecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCC--------CC-CCC--------CCCCCCceEEEEEeCC
Q 010700 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGL--------LG-TNC--------PIPPKWNWTYQFQVKD 119 (503)
Q Consensus 57 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~--------~~-~q~--------~i~PG~~~~y~f~~~~ 119 (503)
+-+|.++.||++.|.|.-+-....+-...+..-. .-.||. +- ... .+..|+...+.|++.
T Consensus 12 ~~ti~l~~Ge~~~I~L~~NPtTGY~W~~~~~~~~--~l~~~~~~v~~~y~~~~~~~~~~~~~~~~vG~gG~~~~~fka~- 88 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESNPTTGYTWLRSGLAGT--ELSDCTFAIQSKFNNRAPHDNHKNHRRLLVGAGGTMVLEVKAL- 88 (121)
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCeEEEEecCccc--cCCCccEEEeeeEEcCCCCcccccccccEeCCCceEEEEEEEe-
Confidence 3469999999999999876555555555442100 012221 10 001 355577888888884
Q ss_pred Cceee
Q 010700 120 QVGSF 124 (503)
Q Consensus 120 ~~Gt~ 124 (503)
.+|+.
T Consensus 89 ~~G~~ 93 (121)
T 2cio_B 89 KAGKH 93 (121)
T ss_pred cCceE
Confidence 67764
No 167
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=21.88 E-value=31 Score=28.22 Aligned_cols=17 Identities=24% Similarity=0.370 Sum_probs=15.7
Q ss_pred eEEEecCCEEEEEEEeC
Q 010700 59 TINVTTNNNVVVNVRNK 75 (503)
Q Consensus 59 ~i~~~~Gd~v~v~v~N~ 75 (503)
-|.|+.||+|++.+.|+
T Consensus 72 ~InV~~GETVrF~v~nk 88 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEK 88 (131)
T ss_dssp EEEEETTCEEEEEETTE
T ss_pred EEEecCCCEEEEEeCCc
Confidence 49999999999999987
No 168
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=20.77 E-value=37 Score=24.52 Aligned_cols=25 Identities=12% Similarity=0.195 Sum_probs=21.0
Q ss_pred eEEEEEcCCC-CCceEEEecCCEEEE
Q 010700 46 QQVIAINGKF-PGPTINVTTNNNVVV 70 (503)
Q Consensus 46 ~~~~~~Ng~~-pgP~i~~~~Gd~v~v 70 (503)
.-.+.+||++ ++..-.++.||+|.|
T Consensus 42 ~~~vavN~~~v~~~~~~l~~gDeV~i 67 (74)
T 3rpf_C 42 VCAIALNDHLIDNLNTPLKDGDVISL 67 (74)
T ss_dssp TCEEEESSSEECCTTCCCCTTCEEEE
T ss_pred ccEEEECCEEcCCCCcCCCCCCEEEE
Confidence 3568899998 888888999999876
No 169
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=20.70 E-value=2.2e+02 Score=26.16 Aligned_cols=59 Identities=12% Similarity=0.153 Sum_probs=42.3
Q ss_pred eeEEEeCCcEEEEEEeEeCCCCeeeEEEeCCcEEEEEecCCccceeeecEEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 010700 214 ETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA 292 (503)
Q Consensus 214 ~~~~v~~G~~~rlRliN~g~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dvlv~~~~~~g~~y~i~~~~ 292 (503)
..+.++.|+.+||++-+.. -.|.|.+.....++ ..-||..-.+-+.+++ +| .|+.+++-
T Consensus 171 n~l~lP~g~~v~~~~tS~D--ViHsf~ip~l~~k~----------------da~PG~~n~~~~~~~~-~G-~y~g~Cse 229 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD--VIHSWTVPAFGVKQ----------------DAVPGRLAQLWFRAER-EG-IFFGQCSE 229 (262)
T ss_dssp SCEEEETTSEEEEEEEESS--SCEEEEEGGGTEEE----------------EECBTCCEEEEEECCS-CE-EEEECCCS
T ss_pred ceEEEecCCEEEEEEEECc--ccceeeecccCceE----------------EecCCceeEEEEecCC-cE-EEEEEChH
Confidence 4689999999999998754 36788887665543 2346666677777774 57 78887654
No 170
>1lm8_V VHL, VON hippel-lindau disease tumor suppressor; regulation, tumor suppressor, oxygen sensing, transcription; 1.85A {Homo sapiens} SCOP: b.3.3.1 PDB: 1vcb_C 1lqb_C 3zrf_C 3zrc_C
Probab=20.36 E-value=1.3e+02 Score=25.60 Aligned_cols=43 Identities=19% Similarity=0.200 Sum_probs=31.3
Q ss_pred ecCCEEEEEEEeCCCCCeeEEEccCCCCCCCCCCCCCCCCCCCCCCCceEE
Q 010700 63 TTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTY 113 (503)
Q Consensus 63 ~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~q~~i~PG~~~~y 113 (503)
+.+....|+|.|..+++..+-| + ..+|.+..-..|+||+.++.
T Consensus 14 ~s~~~~~V~FvN~s~~~V~v~W--I------Dy~G~~v~Y~~L~PG~~~~q 56 (160)
T 1lm8_V 14 NSREPSQVIFCNRSPRVVLPVW--L------NFDGEPQPYPTLPPGTGRRI 56 (160)
T ss_dssp CCCCEEEEEEEECSSSCEEEEE--E------CTTSCEEECCCBCTTEEEEE
T ss_pred CCCceEEEEEEeCCCCeEEEEE--E------CCCCCEEEeeeeCCCCEEeC
Confidence 3567899999999999999999 2 24554432344899997763
No 171
>2aqm_A Superoxide dismutase [CU-ZN]; oxidoreductase; 1.10A {Brucella abortus}
Probab=20.27 E-value=59 Score=27.49 Aligned_cols=25 Identities=12% Similarity=0.163 Sum_probs=20.0
Q ss_pred CCcEEEEEEeCCCCCCCceeecCCc
Q 010700 436 YRGFMEVILQNNDTKMHAYHMSGYA 460 (503)
Q Consensus 436 ~g~~vdivi~N~~~~~HP~HLHGh~ 460 (503)
.+-.|++.|.+..+..|-||+|-.-
T Consensus 29 ~gv~v~~~l~GL~pG~hGfHIHe~G 53 (154)
T 2aqm_A 29 GGLHFKVNMEKLTPGYHGFHVHENP 53 (154)
T ss_dssp TSEEEEEEECSCCSEEECEEEESSS
T ss_pred CCEEEEEEEECCCCCcceEEEccCC
Confidence 3557788888888889999999654
Done!