Query 010705
Match_columns 503
No_of_seqs 262 out of 1627
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 12:31:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010705.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010705hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.8 4.3E-20 1.5E-24 158.9 16.8 115 379-499 11-125 (126)
2 3rkv_A Putative peptidylprolyl 99.8 1.2E-18 4E-23 152.3 15.6 124 379-502 9-145 (162)
3 3upv_A Heat shock protein STI1 99.8 8.2E-18 2.8E-22 140.4 16.3 117 380-502 3-125 (126)
4 4gcn_A Protein STI-1; structur 99.8 1.2E-17 4E-22 143.3 15.0 114 380-500 7-127 (127)
5 2hr2_A Hypothetical protein; a 99.7 3.4E-18 1.2E-22 158.3 10.4 123 380-502 10-149 (159)
6 3sz7_A HSC70 cochaperone (SGT) 99.7 5.7E-17 1.9E-21 141.9 16.1 118 378-501 8-127 (164)
7 3gyz_A Chaperone protein IPGC; 99.7 2.9E-16 1E-20 141.1 16.2 104 380-489 35-138 (151)
8 4ga2_A E3 SUMO-protein ligase 99.7 2.5E-16 8.5E-21 138.4 14.7 116 380-501 30-146 (150)
9 2xcb_A PCRH, regulatory protei 99.7 2.6E-16 8.8E-21 135.5 14.3 116 380-501 17-132 (142)
10 2vgx_A Chaperone SYCD; alterna 99.7 4.9E-16 1.7E-20 136.8 15.2 116 380-501 20-135 (148)
11 3q49_B STIP1 homology and U bo 99.7 8E-16 2.7E-20 128.3 15.0 116 380-501 8-128 (137)
12 1elw_A TPR1-domain of HOP; HOP 99.7 3.1E-15 1.1E-19 119.1 17.1 115 380-500 3-117 (118)
13 2fbn_A 70 kDa peptidylprolyl i 99.7 1.8E-15 6.1E-20 136.3 17.1 124 379-502 36-169 (198)
14 2dba_A Smooth muscle cell asso 99.7 2.6E-15 8.9E-20 125.3 16.4 119 380-501 27-145 (148)
15 2lni_A Stress-induced-phosphop 99.6 2.8E-15 9.6E-20 122.6 14.5 117 379-501 14-130 (133)
16 1ihg_A Cyclophilin 40; ppiase 99.6 2.5E-15 8.6E-20 152.5 16.9 124 379-502 221-354 (370)
17 2vyi_A SGTA protein; chaperone 99.6 1.4E-14 4.7E-19 117.0 17.9 118 379-502 10-127 (131)
18 1p5q_A FKBP52, FK506-binding p 99.6 4.9E-15 1.7E-19 147.1 17.7 123 379-501 145-276 (336)
19 2xev_A YBGF; tetratricopeptide 99.6 8.2E-15 2.8E-19 120.9 15.2 116 383-501 4-122 (129)
20 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 3.4E-15 1.1E-19 154.7 15.5 123 379-501 266-397 (457)
21 3urz_A Uncharacterized protein 99.6 1.3E-14 4.4E-19 133.1 17.6 114 380-499 3-132 (208)
22 1a17_A Serine/threonine protei 99.6 2.4E-14 8.2E-19 121.7 17.8 114 379-498 11-124 (166)
23 1elr_A TPR2A-domain of HOP; HO 99.6 1.6E-14 5.5E-19 117.0 15.3 116 380-502 3-125 (131)
24 1na0_A Designed protein CTPR3; 99.6 5.8E-14 2E-18 112.4 18.0 117 380-502 8-124 (125)
25 1hxi_A PEX5, peroxisome target 99.6 6.6E-15 2.3E-19 125.3 12.5 102 383-490 19-120 (121)
26 4gyw_A UDP-N-acetylglucosamine 99.6 2.2E-14 7.6E-19 158.8 17.8 117 378-500 40-156 (723)
27 4ga2_A E3 SUMO-protein ligase 99.6 3.8E-15 1.3E-19 130.8 9.2 108 387-500 3-110 (150)
28 4i17_A Hypothetical protein; T 99.6 8.6E-14 2.9E-18 126.6 16.8 106 381-491 7-112 (228)
29 2pl2_A Hypothetical conserved 99.6 3.7E-14 1.3E-18 130.9 14.4 118 376-500 34-162 (217)
30 3vtx_A MAMA; tetratricopeptide 99.6 1.7E-13 5.8E-18 120.3 17.8 115 380-500 4-152 (184)
31 2if4_A ATFKBP42; FKBP-like, al 99.5 6.8E-15 2.3E-19 146.5 9.1 116 379-500 177-309 (338)
32 4gyw_A UDP-N-acetylglucosamine 99.5 6.5E-14 2.2E-18 155.1 17.8 118 379-502 7-124 (723)
33 2e2e_A Formate-dependent nitri 99.5 1E-13 3.5E-18 121.6 15.2 114 380-499 43-159 (177)
34 2pl2_A Hypothetical conserved 99.5 8.7E-14 3E-18 128.4 15.2 115 380-501 72-197 (217)
35 2kck_A TPR repeat; tetratricop 99.5 5.7E-14 2E-18 111.1 10.0 102 381-488 6-110 (112)
36 4i17_A Hypothetical protein; T 99.5 1.5E-13 5E-18 125.1 13.9 122 380-501 75-226 (228)
37 2c2l_A CHIP, carboxy terminus 99.5 1.4E-13 4.7E-18 133.0 13.9 103 380-488 3-105 (281)
38 3k9i_A BH0479 protein; putativ 99.5 7.6E-14 2.6E-18 116.2 10.4 104 393-499 2-105 (117)
39 3uq3_A Heat shock protein STI1 99.5 3E-13 1E-17 121.9 15.1 114 380-499 138-257 (258)
40 3urz_A Uncharacterized protein 99.5 3.6E-13 1.2E-17 123.5 15.8 107 387-500 60-201 (208)
41 2h6f_A Protein farnesyltransfe 99.5 2.5E-13 8.5E-18 139.2 15.4 116 380-501 96-212 (382)
42 2h6f_A Protein farnesyltransfe 99.5 2.2E-13 7.5E-18 139.5 14.1 116 380-501 130-246 (382)
43 1hh8_A P67PHOX, NCF-2, neutrop 99.5 7.1E-13 2.4E-17 118.4 15.6 113 380-498 36-166 (213)
44 2fo7_A Synthetic consensus TPR 99.5 1.8E-12 6.2E-17 104.1 16.4 112 382-499 2-113 (136)
45 1zu2_A Mitochondrial import re 99.5 9.4E-14 3.2E-18 128.5 9.9 104 392-501 13-137 (158)
46 3vtx_A MAMA; tetratricopeptide 99.5 1.8E-12 6.3E-17 113.7 17.7 101 384-490 76-176 (184)
47 3as5_A MAMA; tetratricopeptide 99.5 4E-12 1.4E-16 108.2 19.1 116 380-501 41-156 (186)
48 1xnf_A Lipoprotein NLPI; TPR, 99.5 1.8E-12 6.2E-17 118.5 17.1 109 379-493 41-149 (275)
49 3uq3_A Heat shock protein STI1 99.4 4E-12 1.4E-16 114.5 17.6 121 381-501 79-219 (258)
50 2q7f_A YRRB protein; TPR, prot 99.4 5E-12 1.7E-16 113.5 18.0 114 380-499 56-169 (243)
51 1wao_1 Serine/threonine protei 99.4 1.5E-13 5.2E-18 143.7 9.3 114 380-499 5-118 (477)
52 1hh8_A P67PHOX, NCF-2, neutrop 99.4 1.8E-12 6.1E-17 115.7 14.7 101 380-489 5-105 (213)
53 2vsy_A XCC0866; transferase, g 99.4 1.8E-12 6.1E-17 135.5 17.1 116 380-501 22-137 (568)
54 3ieg_A DNAJ homolog subfamily 99.4 4.2E-12 1.5E-16 119.2 17.4 116 385-502 238-353 (359)
55 3hym_B Cell division cycle pro 99.4 2E-12 6.9E-17 120.7 14.4 121 380-500 192-315 (330)
56 3as5_A MAMA; tetratricopeptide 99.4 3.4E-12 1.2E-16 108.6 14.1 116 379-500 6-121 (186)
57 2l6j_A TPR repeat-containing p 99.4 1.3E-13 4.4E-18 110.5 4.9 96 380-481 3-104 (111)
58 2q7f_A YRRB protein; TPR, prot 99.4 7.8E-12 2.7E-16 112.2 17.0 116 380-501 90-205 (243)
59 1fch_A Peroxisomal targeting s 99.4 5.1E-12 1.8E-16 120.8 16.2 116 380-501 216-342 (368)
60 3ieg_A DNAJ homolog subfamily 99.4 5.1E-12 1.7E-16 118.7 15.6 111 380-496 2-115 (359)
61 4eqf_A PEX5-related protein; a 99.4 4.1E-12 1.4E-16 122.7 14.7 103 380-488 212-314 (365)
62 3qky_A Outer membrane assembly 99.4 2.9E-12 9.8E-17 119.5 13.2 113 380-495 14-137 (261)
63 2fo7_A Synthetic consensus TPR 99.4 9.2E-12 3.2E-16 99.9 14.4 103 380-488 34-136 (136)
64 3gyz_A Chaperone protein IPGC; 99.4 6.7E-13 2.3E-17 119.1 7.9 97 400-502 21-117 (151)
65 3qky_A Outer membrane assembly 99.4 7.8E-12 2.7E-16 116.5 15.2 117 380-499 51-195 (261)
66 2vq2_A PILW, putative fimbrial 99.4 1.7E-11 5.8E-16 108.1 16.4 115 380-500 41-158 (225)
67 3u4t_A TPR repeat-containing p 99.4 8E-12 2.7E-16 114.7 14.9 115 380-500 73-187 (272)
68 2yhc_A BAMD, UPF0169 lipoprote 99.4 7.3E-12 2.5E-16 115.6 14.6 112 380-494 3-135 (225)
69 3edt_B KLC 2, kinesin light ch 99.4 5.2E-12 1.8E-16 114.6 13.4 122 378-499 40-179 (283)
70 2ho1_A Type 4 fimbrial biogene 99.4 1.5E-11 5.3E-16 111.9 16.4 114 380-499 70-185 (252)
71 4g1t_A Interferon-induced prot 99.4 7.2E-12 2.5E-16 124.8 15.5 121 378-498 48-181 (472)
72 4abn_A Tetratricopeptide repea 99.4 3.3E-12 1.1E-16 132.5 13.1 115 381-501 170-304 (474)
73 2vq2_A PILW, putative fimbrial 99.4 2.3E-11 7.7E-16 107.3 16.4 120 377-500 72-193 (225)
74 2ho1_A Type 4 fimbrial biogene 99.4 1.9E-11 6.3E-16 111.3 16.2 117 380-500 104-220 (252)
75 3cv0_A Peroxisome targeting si 99.3 2E-11 6.8E-16 113.8 16.5 116 380-501 171-298 (327)
76 3ro3_A PINS homolog, G-protein 99.3 1.6E-11 5.5E-16 101.6 14.0 107 380-486 8-120 (164)
77 3qou_A Protein YBBN; thioredox 99.3 1.3E-11 4.4E-16 119.2 15.4 117 380-502 116-268 (287)
78 1qqe_A Vesicular transport pro 99.3 1.2E-11 4.1E-16 119.0 15.2 111 380-490 76-193 (292)
79 4gco_A Protein STI-1; structur 99.3 1.1E-11 3.7E-16 106.3 13.3 86 417-502 9-94 (126)
80 1w3b_A UDP-N-acetylglucosamine 99.3 1.1E-11 3.9E-16 120.9 15.1 114 381-500 271-384 (388)
81 2xpi_A Anaphase-promoting comp 99.3 2.2E-11 7.4E-16 124.8 17.4 121 380-500 474-595 (597)
82 4eqf_A PEX5-related protein; a 99.3 8.2E-12 2.8E-16 120.5 13.4 110 386-501 182-293 (365)
83 2y4t_A DNAJ homolog subfamily 99.3 1.9E-11 6.4E-16 120.5 16.1 111 380-496 25-138 (450)
84 4abn_A Tetratricopeptide repea 99.3 5.5E-12 1.9E-16 130.8 12.8 115 379-500 100-224 (474)
85 2pzi_A Probable serine/threoni 99.3 4.1E-12 1.4E-16 138.1 12.1 115 380-501 432-546 (681)
86 1w3b_A UDP-N-acetylglucosamine 99.3 2.4E-11 8.4E-16 118.5 16.1 110 383-498 205-314 (388)
87 2y4t_A DNAJ homolog subfamily 99.3 2.7E-11 9.4E-16 119.3 16.6 115 385-501 261-375 (450)
88 2kat_A Uncharacterized protein 99.3 1.3E-11 4.5E-16 101.5 11.9 93 399-497 3-97 (115)
89 2gw1_A Mitochondrial precursor 99.3 1.5E-11 5.3E-16 122.2 14.6 103 379-488 4-106 (514)
90 1qqe_A Vesicular transport pro 99.3 1.5E-11 5E-16 118.4 13.7 112 380-491 116-235 (292)
91 3u4t_A TPR repeat-containing p 99.3 7.9E-12 2.7E-16 114.8 11.2 120 377-499 33-153 (272)
92 2pzi_A Probable serine/threoni 99.3 2.8E-12 9.5E-17 139.4 9.5 113 380-499 466-578 (681)
93 2r5s_A Uncharacterized protein 99.3 3.2E-11 1.1E-15 106.9 13.9 118 377-501 36-156 (176)
94 3hym_B Cell division cycle pro 99.3 3.2E-11 1.1E-15 112.5 14.4 113 381-499 90-203 (330)
95 3fp2_A TPR repeat-containing p 99.3 1.1E-11 3.6E-16 124.8 11.8 108 376-490 20-127 (537)
96 1fch_A Peroxisomal targeting s 99.3 5.8E-11 2E-15 113.5 16.1 81 420-500 216-296 (368)
97 3ro3_A PINS homolog, G-protein 99.3 4.5E-11 1.5E-15 98.9 13.3 108 380-487 48-161 (164)
98 2vgx_A Chaperone SYCD; alterna 99.3 1.1E-11 3.7E-16 108.9 9.8 96 400-501 6-101 (148)
99 2e2e_A Formate-dependent nitri 99.3 1.2E-11 4.1E-16 108.4 9.5 105 391-501 20-127 (177)
100 1na3_A Designed protein CTPR2; 99.3 8.9E-11 3E-15 90.9 13.0 83 419-501 7-89 (91)
101 2yhc_A BAMD, UPF0169 lipoprote 99.3 1.1E-10 3.9E-15 107.6 15.7 118 380-500 40-195 (225)
102 3u3w_A Transcriptional activat 99.3 5E-11 1.7E-15 114.0 13.7 106 380-485 154-267 (293)
103 3edt_B KLC 2, kinesin light ch 99.2 7.9E-11 2.7E-15 106.8 13.8 108 378-485 82-199 (283)
104 3q15_A PSP28, response regulat 99.2 9.2E-11 3.2E-15 115.6 15.4 109 379-487 180-293 (378)
105 3ulq_A Response regulator aspa 99.2 8.3E-11 2.8E-15 115.6 14.9 108 379-486 182-295 (383)
106 2gw1_A Mitochondrial precursor 99.2 1.1E-10 3.8E-15 116.0 15.3 119 381-499 372-493 (514)
107 2xcb_A PCRH, regulatory protei 99.2 3.7E-11 1.3E-15 103.2 10.2 94 402-501 5-98 (142)
108 1xnf_A Lipoprotein NLPI; TPR, 99.2 7.2E-11 2.5E-15 107.9 12.7 107 393-501 17-123 (275)
109 3cv0_A Peroxisome targeting si 99.2 7.6E-11 2.6E-15 109.8 13.0 109 380-494 20-128 (327)
110 1na3_A Designed protein CTPR2; 99.2 1.6E-10 5.4E-15 89.4 12.6 84 380-469 8-91 (91)
111 3nf1_A KLC 1, kinesin light ch 99.2 7.9E-11 2.7E-15 108.9 12.7 122 378-499 66-205 (311)
112 2vsy_A XCC0866; transferase, g 99.2 7.2E-11 2.5E-15 123.4 13.9 104 380-489 56-162 (568)
113 3gw4_A Uncharacterized protein 99.2 1.4E-10 4.8E-15 101.8 13.5 107 379-485 24-137 (203)
114 3nf1_A KLC 1, kinesin light ch 99.2 1.4E-10 4.7E-15 107.3 13.9 107 379-485 25-141 (311)
115 3mkr_A Coatomer subunit epsilo 99.2 2.5E-10 8.6E-15 111.0 16.4 109 380-496 129-241 (291)
116 3ulq_A Response regulator aspa 99.2 1.2E-10 4.2E-15 114.4 14.3 121 379-499 141-274 (383)
117 3upv_A Heat shock protein STI1 99.2 1.8E-10 6.2E-15 95.7 13.1 83 419-501 2-84 (126)
118 2kc7_A BFR218_protein; tetratr 99.2 2.8E-11 9.7E-16 96.5 7.7 90 385-488 4-94 (99)
119 2l6j_A TPR repeat-containing p 99.2 1.4E-10 4.9E-15 92.6 11.8 81 420-500 3-89 (111)
120 2qfc_A PLCR protein; TPR, HTH, 99.2 1.5E-10 5.2E-15 110.6 14.1 106 380-485 154-267 (293)
121 3mkr_A Coatomer subunit epsilo 99.2 2.6E-10 9E-15 110.9 15.9 103 389-497 174-277 (291)
122 1a17_A Serine/threonine protei 99.2 2.5E-10 8.6E-15 96.7 13.6 99 380-484 46-146 (166)
123 3sz7_A HSC70 cochaperone (SGT) 99.2 1.8E-10 6.2E-15 100.4 13.0 87 416-502 6-92 (164)
124 3fp2_A TPR repeat-containing p 99.2 1.4E-10 4.8E-15 116.6 13.8 80 419-498 308-387 (537)
125 1p5q_A FKBP52, FK506-binding p 99.2 1.9E-10 6.3E-15 114.2 13.7 98 381-484 196-294 (336)
126 2ifu_A Gamma-SNAP; membrane fu 99.2 9.7E-11 3.3E-15 113.5 11.4 105 382-488 117-227 (307)
127 3sf4_A G-protein-signaling mod 99.2 2.4E-10 8.2E-15 109.8 14.0 110 379-488 185-300 (406)
128 2ifu_A Gamma-SNAP; membrane fu 99.2 2.7E-10 9.2E-15 110.3 14.3 110 378-488 73-188 (307)
129 4gcn_A Protein STI-1; structur 99.2 7.9E-11 2.7E-15 100.6 8.8 71 419-489 6-76 (127)
130 3ma5_A Tetratricopeptide repea 99.2 1.8E-10 6.3E-15 94.2 10.5 82 417-498 3-86 (100)
131 2xpi_A Anaphase-promoting comp 99.1 7.2E-10 2.5E-14 113.5 17.0 114 380-499 372-485 (597)
132 3sf4_A G-protein-signaling mod 99.1 3.4E-10 1.1E-14 108.7 13.3 120 380-499 226-357 (406)
133 3ro2_A PINS homolog, G-protein 99.1 3.8E-10 1.3E-14 104.0 13.1 108 380-487 182-295 (338)
134 4g1t_A Interferon-induced prot 99.1 6E-10 2.1E-14 111.0 14.7 118 380-497 93-217 (472)
135 3gw4_A Uncharacterized protein 99.1 8.4E-10 2.9E-14 96.8 14.0 108 379-486 64-178 (203)
136 3q15_A PSP28, response regulat 99.1 4.3E-10 1.5E-14 110.8 13.5 123 378-500 138-272 (378)
137 4a1s_A PINS, partner of inscut 99.1 2.6E-10 9.1E-15 111.2 11.5 108 380-487 222-335 (411)
138 3u3w_A Transcriptional activat 99.1 2.3E-10 7.7E-15 109.4 10.6 118 382-499 116-246 (293)
139 2qfc_A PLCR protein; TPR, HTH, 99.1 1E-09 3.5E-14 104.9 13.9 106 381-486 115-227 (293)
140 3ro2_A PINS homolog, G-protein 99.1 7.7E-10 2.6E-14 102.0 12.5 109 380-488 222-336 (338)
141 4a1s_A PINS, partner of inscut 99.1 3E-10 1E-14 110.8 10.2 109 380-488 165-296 (411)
142 2kc7_A BFR218_protein; tetratr 99.1 8.2E-10 2.8E-14 87.9 10.9 76 425-500 4-82 (99)
143 3q49_B STIP1 homology and U bo 99.1 1.4E-09 4.8E-14 90.3 12.7 84 418-501 6-89 (137)
144 2kck_A TPR repeat; tetratricop 99.1 4.6E-10 1.6E-14 88.4 9.0 84 418-501 3-88 (112)
145 1ouv_A Conserved hypothetical 99.1 3.4E-09 1.2E-13 98.8 16.3 94 381-484 6-107 (273)
146 1hxi_A PEX5, peroxisome target 99.1 1.3E-09 4.6E-14 92.4 12.2 79 422-500 18-96 (121)
147 2fbn_A 70 kDa peptidylprolyl i 99.1 7.8E-10 2.7E-14 99.3 11.0 98 381-484 88-186 (198)
148 2vyi_A SGTA protein; chaperone 99.1 1.6E-09 5.5E-14 87.0 11.6 86 380-471 45-130 (131)
149 1ouv_A Conserved hypothetical 99.0 6E-09 2E-13 97.1 16.4 107 380-498 37-155 (273)
150 2ond_A Cleavage stimulation fa 99.0 2E-09 7E-14 103.7 13.6 115 380-500 98-214 (308)
151 2if4_A ATFKBP42; FKBP-like, al 99.0 2.3E-10 7.9E-15 113.8 6.2 104 382-491 231-335 (338)
152 1wao_1 Serine/threonine protei 99.0 1.2E-10 4E-15 121.8 4.0 103 380-488 39-154 (477)
153 1kt0_A FKBP51, 51 kDa FK506-bi 99.0 1.5E-09 5E-14 112.5 11.6 91 381-477 317-407 (457)
154 2lni_A Stress-induced-phosphop 99.0 3.6E-09 1.2E-13 86.0 11.4 85 417-501 12-96 (133)
155 1elw_A TPR1-domain of HOP; HOP 99.0 7.8E-09 2.7E-13 81.8 12.9 82 420-501 3-84 (118)
156 4f3v_A ESX-1 secretion system 99.0 4.4E-09 1.5E-13 105.2 13.7 126 364-497 120-249 (282)
157 3rjv_A Putative SEL1 repeat pr 99.0 2E-09 7E-14 99.1 10.1 108 380-498 17-134 (212)
158 3rkv_A Putative peptidylprolyl 99.0 2.5E-09 8.4E-14 93.0 9.9 88 380-473 62-150 (162)
159 2ond_A Cleavage stimulation fa 99.0 5E-09 1.7E-13 101.0 12.9 111 380-496 49-175 (308)
160 3rjv_A Putative SEL1 repeat pr 99.0 2.9E-09 9.9E-14 98.1 10.7 108 381-498 50-171 (212)
161 3k9i_A BH0479 protein; putativ 99.0 3.7E-09 1.3E-13 87.7 10.4 87 379-471 25-111 (117)
162 1hz4_A MALT regulatory protein 98.9 1.7E-08 5.9E-13 98.0 16.5 108 380-487 52-167 (373)
163 3n71_A Histone lysine methyltr 98.9 7.8E-09 2.7E-13 109.9 15.1 114 383-496 311-439 (490)
164 3qww_A SET and MYND domain-con 98.9 7.7E-09 2.7E-13 108.4 14.2 113 388-500 305-432 (433)
165 2r5s_A Uncharacterized protein 98.9 1.1E-08 3.8E-13 90.4 12.8 96 382-483 74-172 (176)
166 2dba_A Smooth muscle cell asso 98.9 9.4E-09 3.2E-13 85.3 11.2 84 418-501 25-111 (148)
167 1na0_A Designed protein CTPR3; 98.9 2.7E-08 9.3E-13 79.1 13.0 81 420-500 8-88 (125)
168 1ihg_A Cyclophilin 40; ppiase 98.9 6.2E-09 2.1E-13 105.6 11.4 93 380-478 272-364 (370)
169 2xev_A YBGF; tetratricopeptide 98.9 9.8E-09 3.3E-13 84.2 10.6 80 422-501 3-88 (129)
170 2v5f_A Prolyl 4-hydroxylase su 98.9 2.8E-08 9.5E-13 82.9 13.2 83 380-462 4-87 (104)
171 1elr_A TPR2A-domain of HOP; HO 98.9 1.7E-08 5.7E-13 81.3 10.7 81 420-500 3-90 (131)
172 2hr2_A Hypothetical protein; a 98.8 1.5E-08 5.2E-13 93.7 11.4 81 420-500 10-113 (159)
173 1hz4_A MALT regulatory protein 98.8 5.3E-08 1.8E-12 94.5 15.4 107 380-486 92-205 (373)
174 3qwp_A SET and MYND domain-con 98.8 2E-08 6.8E-13 104.8 13.2 120 381-500 287-421 (429)
175 1pc2_A Mitochondria fission pr 98.8 1.7E-08 5.6E-13 93.0 11.0 100 397-502 14-118 (152)
176 3qou_A Protein YBBN; thioredox 98.8 1.2E-08 4E-13 98.5 10.4 105 380-484 150-284 (287)
177 3ma5_A Tetratricopeptide repea 98.8 2E-08 6.9E-13 81.9 9.8 83 380-468 6-90 (100)
178 1klx_A Cysteine rich protein B 98.8 3.8E-08 1.3E-12 85.7 12.1 99 387-497 31-137 (138)
179 3bee_A Putative YFRE protein; 98.8 3.5E-08 1.2E-12 82.2 11.2 83 418-500 3-91 (93)
180 1dce_A Protein (RAB geranylger 98.8 3.9E-08 1.3E-12 105.8 14.5 115 380-500 62-189 (567)
181 1dce_A Protein (RAB geranylger 98.8 2.6E-08 8.9E-13 107.2 12.7 116 380-501 106-238 (567)
182 2kat_A Uncharacterized protein 98.8 3E-08 1E-12 81.3 9.9 84 380-469 18-103 (115)
183 2c2l_A CHIP, carboxy terminus 98.8 3.9E-08 1.3E-12 94.8 11.6 82 420-501 3-84 (281)
184 2v5f_A Prolyl 4-hydroxylase su 98.7 1.1E-07 3.8E-12 79.2 12.0 81 421-501 5-92 (104)
185 3n71_A Histone lysine methyltr 98.7 8E-08 2.7E-12 102.2 12.6 117 375-491 345-471 (490)
186 1zu2_A Mitochondrial import re 98.7 2.9E-08 1E-12 91.7 7.9 70 380-455 35-125 (158)
187 3dra_A Protein farnesyltransfe 98.7 2.4E-07 8.1E-12 93.0 14.2 116 380-501 102-232 (306)
188 3dra_A Protein farnesyltransfe 98.7 3E-07 1E-11 92.2 14.7 113 380-498 66-189 (306)
189 2ooe_A Cleavage stimulation fa 98.6 2.6E-07 9.1E-12 95.4 13.7 114 380-499 320-435 (530)
190 2xm6_A Protein corresponding t 98.6 2.1E-07 7.1E-12 95.3 12.6 105 381-495 328-446 (490)
191 3q7a_A Farnesyltransferase alp 98.6 8.9E-07 3.1E-11 90.9 16.8 112 381-498 54-168 (349)
192 3dss_A Geranylgeranyl transfer 98.6 8.9E-07 3E-11 90.2 15.9 113 380-498 107-236 (331)
193 2xm6_A Protein corresponding t 98.6 1.1E-06 3.7E-11 90.0 16.2 108 380-499 74-193 (490)
194 3dss_A Geranylgeranyl transfer 98.5 2.4E-06 8.2E-11 87.0 16.3 115 380-500 63-190 (331)
195 4b4t_Q 26S proteasome regulato 98.5 6.6E-07 2.3E-11 88.0 11.8 106 381-486 55-206 (434)
196 4b4t_Q 26S proteasome regulato 98.5 4.7E-07 1.6E-11 89.1 10.3 106 379-484 133-238 (434)
197 2ooe_A Cleavage stimulation fa 98.5 8.3E-07 2.8E-11 91.7 12.4 106 380-491 271-392 (530)
198 3q7a_A Farnesyltransferase alp 98.5 9.7E-07 3.3E-11 90.7 12.7 114 380-499 87-211 (349)
199 4f3v_A ESX-1 secretion system 98.5 3.6E-07 1.2E-11 91.4 9.1 112 380-498 101-217 (282)
200 3e4b_A ALGK; tetratricopeptide 98.4 9.3E-07 3.2E-11 91.0 11.7 106 383-499 178-293 (452)
201 3ly7_A Transcriptional activat 98.4 3.9E-06 1.3E-10 87.1 15.6 103 380-489 195-344 (372)
202 1klx_A Cysteine rich protein B 98.4 1.7E-06 6E-11 75.1 10.5 93 394-500 8-104 (138)
203 3e4b_A ALGK; tetratricopeptide 98.3 2.8E-06 9.6E-11 87.5 11.5 105 380-498 247-363 (452)
204 1nzn_A CGI-135 protein, fissio 98.3 5.6E-06 1.9E-10 74.1 10.8 105 392-502 12-121 (126)
205 3u64_A Protein TP_0956; tetrat 98.1 9E-06 3.1E-10 82.2 11.0 105 379-487 150-272 (301)
206 3ffl_A Anaphase-promoting comp 98.1 3.1E-05 1.1E-09 72.4 13.0 119 381-500 20-166 (167)
207 3qwp_A SET and MYND domain-con 98.1 1.6E-05 5.4E-10 82.9 11.5 93 376-468 324-426 (429)
208 1pc2_A Mitochondria fission pr 98.1 2.3E-05 7.9E-10 72.0 11.2 83 380-467 31-117 (152)
209 3mv2_B Coatomer subunit epsilo 98.1 4.2E-05 1.4E-09 77.4 13.8 117 366-487 86-210 (310)
210 3bee_A Putative YFRE protein; 98.0 2.5E-05 8.6E-10 64.8 9.0 69 380-454 5-76 (93)
211 3qww_A SET and MYND domain-con 98.0 3E-05 1E-09 81.2 11.7 83 375-457 334-423 (433)
212 1xi4_A Clathrin heavy chain; a 98.0 3.6E-05 1.2E-09 91.3 12.7 106 381-500 1195-1325(1630)
213 1b89_A Protein (clathrin heavy 98.0 1.3E-05 4.5E-10 85.0 8.3 103 382-500 123-252 (449)
214 3mv2_B Coatomer subunit epsilo 97.9 0.0001 3.5E-09 74.7 13.8 114 379-499 134-265 (310)
215 1y8m_A FIS1; mitochondria, unk 97.7 0.00049 1.7E-08 62.9 13.6 83 420-502 38-124 (144)
216 3o48_A Mitochondria fission 1 97.7 0.00021 7.1E-09 64.6 10.8 83 420-502 39-125 (134)
217 1xi4_A Clathrin heavy chain; a 97.6 0.00027 9.2E-09 84.1 11.9 92 387-487 1055-1166(1630)
218 3ffl_A Anaphase-promoting comp 97.3 0.00099 3.4E-08 62.2 9.4 89 377-466 59-166 (167)
219 4h7y_A Dual specificity protei 97.2 0.0051 1.7E-07 57.1 12.7 113 380-493 12-132 (161)
220 1nzn_A CGI-135 protein, fissio 97.1 0.0029 1E-07 56.5 10.0 81 380-465 34-118 (126)
221 2ff4_A Probable regulatory pro 97.0 0.011 3.7E-07 60.6 14.5 102 382-483 116-233 (388)
222 3u64_A Protein TP_0956; tetrat 96.9 0.0072 2.5E-07 61.2 12.3 79 418-496 149-246 (301)
223 3txn_A 26S proteasome regulato 96.9 0.0089 3E-07 62.3 13.1 100 386-485 104-211 (394)
224 3o48_A Mitochondria fission 1 96.9 0.013 4.5E-07 52.9 12.5 83 380-467 39-124 (134)
225 3ly7_A Transcriptional activat 96.8 0.0027 9.3E-08 65.9 8.6 75 380-461 276-350 (372)
226 1y8m_A FIS1; mitochondria, unk 96.7 0.018 6E-07 52.7 12.2 81 380-465 38-121 (144)
227 4e6h_A MRNA 3'-END-processing 96.6 0.015 5.2E-07 64.2 13.4 118 381-498 378-513 (679)
228 1b89_A Protein (clathrin heavy 96.6 0.0024 8.1E-08 67.8 6.4 104 383-486 150-274 (449)
229 4e6h_A MRNA 3'-END-processing 96.4 0.019 6.6E-07 63.4 12.5 99 380-484 342-463 (679)
230 4b4t_R RPN7, 26S proteasome re 96.2 0.031 1E-06 58.0 12.1 104 380-486 130-239 (429)
231 4gns_B Protein CSD3, chitin bi 96.1 0.022 7.4E-07 64.1 11.2 86 396-481 300-397 (754)
232 4b4t_P 26S proteasome regulato 95.9 0.11 3.7E-06 54.4 14.6 105 380-484 136-247 (445)
233 3kae_A CDC27, possible protein 95.4 0.23 7.8E-06 47.4 13.2 99 386-495 38-154 (242)
234 4g26_A Pentatricopeptide repea 95.4 0.21 7.2E-06 52.8 14.5 99 381-484 105-204 (501)
235 2uy1_A Cleavage stimulation fa 95.4 0.27 9.3E-06 51.6 15.2 110 381-492 213-357 (493)
236 4g26_A Pentatricopeptide repea 94.7 0.67 2.3E-05 48.9 15.9 64 421-484 105-169 (501)
237 4gns_B Protein CSD3, chitin bi 94.5 0.076 2.6E-06 59.7 8.7 61 382-448 338-398 (754)
238 1zbp_A Hypothetical protein VP 94.5 0.12 4.2E-06 51.6 9.1 64 431-494 7-70 (273)
239 3mkq_A Coatomer beta'-subunit; 94.2 0.44 1.5E-05 50.6 13.3 48 389-447 660-707 (814)
240 1zbp_A Hypothetical protein VP 94.0 0.36 1.2E-05 48.2 11.4 62 389-456 5-66 (273)
241 2uy1_A Cleavage stimulation fa 93.9 0.44 1.5E-05 50.0 12.5 93 382-481 287-380 (493)
242 1ya0_A SMG-7 transcript varian 93.5 0.33 1.1E-05 51.9 10.7 78 423-500 154-231 (497)
243 2ff4_A Probable regulatory pro 92.5 0.39 1.3E-05 49.0 9.3 64 380-449 170-233 (388)
244 1ya0_A SMG-7 transcript varian 92.3 0.66 2.3E-05 49.6 10.9 80 382-467 153-232 (497)
245 3txn_A 26S proteasome regulato 92.2 3.9 0.00014 42.4 16.3 74 425-498 103-185 (394)
246 3mkq_A Coatomer beta'-subunit; 91.7 0.58 2E-05 49.7 9.7 28 381-408 681-708 (814)
247 4b4t_S RPN3, 26S proteasome re 91.6 0.26 8.8E-06 53.3 6.9 74 416-489 226-304 (523)
248 4fhn_B Nucleoporin NUP120; pro 90.9 1.7 5.9E-05 50.3 13.2 99 383-481 844-964 (1139)
249 3mkq_B Coatomer subunit alpha; 89.9 1.8 6.2E-05 40.5 10.2 81 381-480 34-114 (177)
250 2wpv_A GET4, UPF0363 protein Y 89.1 5.5 0.00019 40.2 13.6 98 382-479 34-158 (312)
251 3kae_A CDC27, possible protein 88.9 15 0.00052 35.1 15.5 108 380-487 61-240 (242)
252 3spa_A Mtrpol, DNA-directed RN 88.2 5.7 0.00019 46.6 14.5 104 380-485 126-231 (1134)
253 3lpz_A GET4 (YOR164C homolog); 87.7 6.9 0.00024 40.0 13.4 97 382-479 36-160 (336)
254 3mv2_A Coatomer subunit alpha; 87.2 22 0.00076 36.2 16.7 112 382-493 115-245 (325)
255 4b4t_R RPN7, 26S proteasome re 86.3 2.1 7.2E-05 44.2 8.9 82 417-498 127-213 (429)
256 4h7y_A Dual specificity protei 85.1 2.9 9.8E-05 38.8 8.1 83 379-469 59-141 (161)
257 4b4t_S RPN3, 26S proteasome re 84.8 5.4 0.00019 43.1 11.4 77 376-454 226-303 (523)
258 1wfd_A Hypothetical protein 15 81.6 6.3 0.00022 32.8 8.3 34 380-413 14-47 (93)
259 3mkr_B Coatomer subunit alpha; 80.7 9.1 0.00031 39.0 10.6 108 383-490 104-233 (320)
260 4b4t_P 26S proteasome regulato 80.1 10 0.00035 39.4 11.1 76 375-450 171-247 (445)
261 2w2u_A Hypothetical P60 katani 79.2 6.8 0.00023 32.1 7.5 33 380-412 18-50 (83)
262 2cpt_A SKD1 protein, vacuolar 78.2 5.7 0.0002 34.6 7.2 33 380-412 17-49 (117)
263 2v6y_A AAA family ATPase, P60 76.5 10 0.00035 30.9 7.8 33 380-412 10-42 (83)
264 2v6x_A Vacuolar protein sortin 76.4 13 0.00043 30.1 8.3 33 380-412 12-44 (85)
265 4a5x_A MITD1, MIT domain-conta 76.0 11 0.00037 31.1 7.9 34 379-412 14-47 (86)
266 3re2_A Predicted protein; meni 74.3 25 0.00087 36.8 11.7 48 452-499 293-346 (472)
267 3esl_A Checkpoint serine/threo 72.7 49 0.0017 31.5 12.6 84 402-486 58-146 (202)
268 3t5v_B Nuclear mRNA export pro 71.7 7.2 0.00025 41.3 7.3 65 424-488 179-254 (455)
269 1qsa_A Protein (soluble lytic 70.9 7.9 0.00027 42.4 7.6 56 428-483 292-347 (618)
270 3u84_A Menin; MLL, JUND, ledgf 70.9 32 0.0011 36.7 11.6 49 452-500 315-369 (550)
271 2wvi_A Mitotic checkpoint seri 70.7 31 0.0011 31.7 10.5 78 403-486 45-127 (164)
272 4gq4_A Menin; tumor suppressor 70.4 40 0.0014 35.9 12.3 49 452-500 300-354 (489)
273 3mkq_B Coatomer subunit alpha; 70.1 19 0.00066 33.5 9.0 81 387-478 11-99 (177)
274 4fhn_B Nucleoporin NUP120; pro 68.6 30 0.001 40.0 12.1 69 423-491 844-936 (1139)
275 4gq2_M Nucleoporin NUP120; bet 67.5 18 0.00062 41.2 9.9 97 387-493 816-936 (950)
276 2o8p_A 14-3-3 domain containin 65.4 40 0.0014 32.7 10.4 69 381-449 120-196 (227)
277 4aez_C MAD3, mitotic spindle c 63.9 34 0.0012 33.1 9.6 68 414-487 113-182 (223)
278 4a1g_A Mitotic checkpoint seri 63.1 38 0.0013 30.8 9.3 81 401-487 48-133 (152)
279 2crb_A Nuclear receptor bindin 63.0 24 0.00083 30.0 7.3 33 380-412 14-46 (97)
280 2qx5_A Nucleoporin NIC96; mRNA 62.4 26 0.0009 38.8 9.6 98 384-488 446-570 (661)
281 2vkj_A TM1634; membrane protei 61.2 33 0.0011 29.3 7.7 50 379-432 51-101 (106)
282 2d2s_A Exocyst complex compone 61.1 1E+02 0.0035 29.5 12.5 98 381-482 18-118 (235)
283 3myv_A SUSD superfamily protei 60.7 14 0.00047 38.3 6.7 31 419-449 188-218 (454)
284 3lew_A SUSD-like carbohydrate 59.3 16 0.00053 38.4 6.9 33 418-450 200-232 (495)
285 2rpa_A Katanin P60 ATPase-cont 59.2 16 0.00056 29.8 5.5 33 381-413 12-44 (78)
286 3ax2_A Mitochondrial import re 57.7 23 0.00079 28.6 6.1 31 461-491 23-53 (73)
287 2cfu_A SDSA1; SDS-hydrolase, l 57.2 20 0.00068 39.3 7.5 47 456-502 450-496 (658)
288 3t5x_A PCI domain-containing p 56.6 19 0.00065 33.6 6.4 55 419-473 12-71 (203)
289 3kez_A Putative sugar binding 56.6 17 0.00059 37.6 6.6 31 419-449 194-224 (461)
290 4gq2_M Nucleoporin NUP120; bet 56.4 49 0.0017 37.7 10.8 75 382-456 841-933 (950)
291 4b4t_O 26S proteasome regulato 56.4 46 0.0016 33.9 9.7 95 390-484 85-198 (393)
292 2cpt_A SKD1 protein, vacuolar 56.0 55 0.0019 28.3 8.7 20 437-456 41-60 (117)
293 2br9_A 14-3-3E, 14-3-3 protein 55.5 35 0.0012 33.1 8.1 52 398-449 147-201 (234)
294 3snx_A SUSD homolog, putative 55.1 19 0.00065 37.5 6.6 32 418-449 188-219 (460)
295 1wfd_A Hypothetical protein 15 54.5 44 0.0015 27.6 7.5 20 437-456 38-57 (93)
296 3mcx_A SUSD superfamily protei 52.5 16 0.00055 37.9 5.6 31 419-449 200-230 (477)
297 3hdx_A SUSD homolog, SUSD supe 50.8 25 0.00086 36.5 6.7 54 397-450 156-226 (478)
298 1o9d_A 14-3-3-like protein C; 50.4 45 0.0015 32.9 8.1 52 398-449 152-206 (260)
299 2v6y_A AAA family ATPase, P60 50.3 31 0.0011 27.9 5.9 12 399-410 10-21 (83)
300 2npm_A 14-3-3 domain containin 49.7 44 0.0015 33.0 7.9 51 398-449 173-226 (260)
301 3ubw_A 14-3-3E, 14-3-3 protein 49.3 48 0.0017 32.8 8.1 51 398-448 173-226 (261)
302 3uzd_A 14-3-3 protein gamma; s 49.0 50 0.0017 32.4 8.1 52 398-449 148-202 (248)
303 2dl1_A Spartin; SPG20, MIT, st 48.9 12 0.00042 32.9 3.4 15 396-410 18-32 (116)
304 3myv_A SUSD superfamily protei 48.1 23 0.00078 36.6 5.9 48 437-484 164-219 (454)
305 3t5x_A PCI domain-containing p 47.6 36 0.0012 31.7 6.7 101 377-485 10-112 (203)
306 2w2u_A Hypothetical P60 katani 47.5 33 0.0011 28.0 5.6 13 398-410 17-29 (83)
307 1qsa_A Protein (soluble lytic 46.5 86 0.0029 34.2 10.4 97 384-483 217-313 (618)
308 1wy6_A Hypothetical protein ST 46.4 62 0.0021 29.9 7.7 37 448-484 118-154 (172)
309 2cfu_A SDSA1; SDS-hydrolase, l 46.2 32 0.0011 37.7 6.9 50 422-471 450-499 (658)
310 2wb7_A PT26-6P; extra chromoso 45.8 61 0.0021 35.0 8.7 12 437-448 455-466 (526)
311 3kez_A Putative sugar binding 45.4 25 0.00086 36.4 5.7 48 437-484 170-225 (461)
312 3qnk_A Putative lipoprotein; a 45.1 33 0.0011 36.1 6.6 30 420-449 181-210 (517)
313 3lew_A SUSD-like carbohydrate 44.4 44 0.0015 35.0 7.4 49 437-485 174-233 (495)
314 3dza_A Uncharacterized putativ 43.9 1.8E+02 0.0062 27.5 10.8 103 381-483 35-178 (191)
315 2pm7_A Protein WEB1, protein t 43.9 1.3E+02 0.0045 31.0 10.8 43 456-501 337-379 (399)
316 3iqu_A 14-3-3 protein sigma; s 43.3 69 0.0024 31.1 8.0 51 398-448 150-203 (236)
317 3mcx_A SUSD superfamily protei 43.0 26 0.00091 36.3 5.4 49 437-485 176-232 (477)
318 3spa_A Mtrpol, DNA-directed RN 42.8 1.5E+02 0.0051 35.0 11.9 65 420-484 126-194 (1134)
319 2crb_A Nuclear receptor bindin 41.0 36 0.0012 29.0 4.9 30 420-449 14-43 (97)
320 4a5x_A MITD1, MIT domain-conta 40.3 96 0.0033 25.3 7.4 13 398-410 14-26 (86)
321 3jq1_A SUSD superfamily protei 40.3 26 0.00089 36.6 4.9 53 397-449 154-208 (481)
322 3i4g_A SUSD-like carbohydrate 40.2 46 0.0016 35.2 6.9 29 421-449 198-226 (528)
323 1om2_A Protein (mitochondrial 40.0 34 0.0012 29.0 4.7 30 426-455 25-54 (95)
324 3t5v_B Nuclear mRNA export pro 39.0 72 0.0025 33.7 8.0 105 378-486 217-329 (455)
325 2ijq_A Hypothetical protein; s 38.5 1.2E+02 0.0041 27.8 8.5 29 381-409 32-60 (161)
326 3efz_A 14-3-3 protein; 14-3-3, 36.4 70 0.0024 31.8 7.0 53 398-450 169-226 (268)
327 2v6x_A Vacuolar protein sortin 36.0 1.3E+02 0.0044 24.0 7.4 13 398-410 11-23 (85)
328 2ijq_A Hypothetical protein; s 35.3 65 0.0022 29.5 6.1 53 431-483 42-103 (161)
329 4b4t_O 26S proteasome regulato 33.4 3E+02 0.01 27.8 11.5 70 380-449 126-197 (393)
330 2dl1_A Spartin; SPG20, MIT, st 33.4 62 0.0021 28.4 5.4 27 383-409 24-50 (116)
331 3hdx_A SUSD homolog, SUSD supe 31.5 74 0.0025 32.9 6.6 48 437-484 156-226 (478)
332 3snx_A SUSD homolog, putative 30.9 48 0.0016 34.4 5.1 47 438-484 161-220 (460)
333 3r9m_A BRO1 domain-containing 30.7 1.5E+02 0.0053 30.0 8.7 30 455-484 253-282 (376)
334 3ax2_A Mitochondrial import re 30.1 80 0.0027 25.4 5.1 32 426-457 22-53 (73)
335 3qnk_A Putative lipoprotein; a 29.3 60 0.0021 34.0 5.5 47 438-484 154-211 (517)
336 3ihv_A SUSD homolog; NP_813570 28.5 68 0.0023 33.6 5.8 29 421-449 196-232 (535)
337 2ymb_A MITD1, MIT domain-conta 27.7 13 0.00044 36.8 0.0 35 379-413 21-55 (257)
338 3lxu_X Tripeptidyl-peptidase 2 26.9 1.8E+02 0.0063 34.9 9.4 51 451-502 1280-1330(1354)
339 2p58_C Putative type III secre 26.7 2.7E+02 0.0093 24.3 8.1 82 386-479 12-93 (116)
340 3bu8_A Telomeric repeat-bindin 26.6 4.5E+02 0.015 25.5 15.1 117 381-499 16-158 (235)
341 2jpu_A ORF C02003 protein; sol 26.2 3.4E+02 0.012 24.0 11.7 31 380-410 6-36 (129)
342 2vkj_A TM1634; membrane protei 25.9 1.9E+02 0.0066 24.6 6.8 47 455-502 53-103 (106)
343 2wpv_A GET4, UPF0363 protein Y 25.8 5E+02 0.017 25.8 15.1 85 384-468 16-105 (312)
344 3jq1_A SUSD superfamily protei 25.6 50 0.0017 34.4 4.1 47 437-483 154-208 (481)
345 2cwy_A Hypothetical protein TT 25.5 89 0.0031 25.9 4.8 25 386-410 6-30 (94)
346 1o3u_A Conserved hypothetical 24.9 1.5E+02 0.0051 25.4 6.4 33 379-411 14-46 (135)
347 2yhe_A SEC-alkyl sulfatase; hy 30.6 16 0.00053 40.5 0.0 44 458-501 464-507 (668)
348 2a9u_A Ubiquitin carboxyl-term 24.7 3.8E+02 0.013 23.9 11.6 42 380-421 41-82 (144)
349 4gq4_A Menin; tumor suppressor 24.5 1.4E+02 0.0048 31.8 7.0 68 380-448 261-330 (489)
350 3ckc_A SUSD; TPR repeat, carbo 24.4 66 0.0023 33.2 4.7 31 419-449 195-231 (527)
351 3rau_A Tyrosine-protein phosph 24.4 2.2E+02 0.0076 28.7 8.5 29 455-483 252-280 (363)
352 4ady_A RPN2, 26S proteasome re 24.2 3.3E+02 0.011 31.6 10.6 24 384-407 148-171 (963)
353 3ph0_C ASCG; type III secretio 23.8 2.2E+02 0.0076 22.2 6.3 52 423-475 8-60 (61)
354 3jys_A SUSD superfamily protei 23.6 71 0.0024 33.5 4.8 31 419-449 186-222 (499)
355 2rpa_A Katanin P60 ATPase-cont 23.5 70 0.0024 26.1 3.7 23 426-448 17-39 (78)
356 3jq0_A SUSD superfamily protei 22.7 94 0.0032 32.4 5.5 28 421-448 183-218 (493)
357 1zb1_A BRO1 protein; AIP1, BRO 22.5 1.5E+02 0.0052 30.1 6.9 27 457-483 259-285 (392)
358 2xs1_A Programmed cell death 6 22.5 3.7E+02 0.013 29.6 10.4 27 457-483 262-288 (704)
359 2uwj_G Type III export protein 22.4 2.8E+02 0.0095 24.2 7.3 83 387-481 12-94 (115)
360 3i4g_A SUSD-like carbohydrate 22.4 1.3E+02 0.0045 31.7 6.6 48 437-484 167-227 (528)
361 1wy6_A Hypothetical protein ST 21.7 2.3E+02 0.008 26.1 7.1 62 384-451 93-155 (172)
362 3qtm_A Uncharacterized protein 20.5 4.7E+02 0.016 26.5 9.5 87 382-468 23-132 (346)
363 3nqp_A SUSD superfamily protei 20.3 1.4E+02 0.0048 31.1 6.3 14 436-449 228-241 (514)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.84 E-value=4.3e-20 Score=158.89 Aligned_cols=115 Identities=24% Similarity=0.388 Sum_probs=110.7
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVL 458 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAl 458 (503)
..+..++++|+.++++|+|++|+++|++||++ +|.+..+|.++|.||+++|++++|+++|+++|+++|++.++|
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 84 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR------DPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGY 84 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHH
Confidence 46889999999999999999999999999999 667789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 459 VQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 459 yrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
+++|.+|..+|++++|+++|+++|+++|++.+++..|.+|.
T Consensus 85 ~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 85 IRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 99999999999999999999999999999999999998875
No 2
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.79 E-value=1.2e-18 Score=152.33 Aligned_cols=124 Identities=22% Similarity=0.270 Sum_probs=112.6
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC------------ChhhHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGD------------MATMMEVLSTRASCYKEVGEYKKAVADCSK 446 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~d------------dpd~A~aysNrAlcylrLGdyeeALedaek 446 (503)
..+..++.+|+.+++.++|++|+++|++||++++.... ++....+|.++|.||+++++|++|+.+|++
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 46889999999999999999999999999998654211 456778999999999999999999999999
Q ss_pred HHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHhhh
Q 010705 447 VLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNR-IARSTIHRLTKMV 502 (503)
Q Consensus 447 ALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~-eAk~~La~LqklL 502 (503)
+|+++|.++++|+++|.+|..+|+|++|+++|+++++++|++. .+...|..+++.+
T Consensus 89 al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~ 145 (162)
T 3rkv_A 89 VLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERR 145 (162)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 7788888876654
No 3
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.77 E-value=8.2e-18 Score=140.38 Aligned_cols=117 Identities=19% Similarity=0.251 Sum_probs=111.8
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+..++.+|..+++.++|++|+++|++++++ +|....+|.++|.||++++++++|+++|+++++++|++..+++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 76 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKR------APEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYI 76 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------CCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 5778999999999999999999999999998 5667899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHhhh
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKID------PSNRIARSTIHRLTKMV 502 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLD------Pen~eAk~~La~LqklL 502 (503)
++|.+|..+|++++|+++|+++++++ |.+.++...+.++++.+
T Consensus 77 ~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 77 RKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999 99999999999998765
No 4
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.76 E-value=1.2e-17 Score=143.27 Aligned_cols=114 Identities=16% Similarity=0.193 Sum_probs=103.4
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-----
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN----- 454 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~----- 454 (503)
.+.+++++|++++++|+|++|+++|++||++ +|....+|.++|.||+++|+|++|+++|+++|+++|++
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 80 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL------DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYK 80 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhH
Confidence 5778999999999999999999999999999 66778999999999999999999999999999998765
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 455 --VSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 455 --~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
.++++++|.+|..++++++|+++|+++|+++|+ +++...|.++++
T Consensus 81 ~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~leK 127 (127)
T 4gcn_A 81 LIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKELEK 127 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHHhCC
Confidence 468999999999999999999999999999884 666777777653
No 5
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.75 E-value=3.4e-18 Score=158.30 Aligned_cols=123 Identities=12% Similarity=0.119 Sum_probs=109.3
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC------ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc---
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGD------MATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ--- 450 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~d------dpd~A~aysNrAlcylrLGdyeeALedaekALkL--- 450 (503)
.+..++.+|+.+++.|+|++|++.|++||++.|..+. .+.++.+|+|+|.|+.++|+|++|+.+|++||++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 5778999999999999999999999999999776321 2335669999999999999999999999999999
Q ss_pred ----CCCCHHHH----HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhhh
Q 010705 451 ----DDTNVSVL----VQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKMV 502 (503)
Q Consensus 451 ----dPd~~kAl----yrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~LqklL 502 (503)
+|++.++| |++|.+|..++++++|+++|+++++++|++..+...+.++++++
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~ 149 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVA 149 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHH
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 99999999 99999999999999999999999999999877666666665543
No 6
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.73 E-value=5.7e-17 Score=141.86 Aligned_cols=118 Identities=18% Similarity=0.185 Sum_probs=108.4
Q ss_pred cchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Q 010705 378 GVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSV 457 (503)
Q Consensus 378 ~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kA 457 (503)
...+..++.+|.++++.++|++|+++|++++++ +|....+|.++|.||+++++|++|+++|+++++++|++..+
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 81 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSI------APANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKA 81 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH
Confidence 347889999999999999999999999999999 56678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH--HHHHHHHHHhh
Q 010705 458 LVQRALLYESMEKYKLGAEDLRTVLKIDPSNRI--ARSTIHRLTKM 501 (503)
Q Consensus 458 lyrlA~Ay~~LGdyeeAle~LqkALkLDPen~e--Ak~~La~Lqkl 501 (503)
++++|.+|+.++++++|+++|+++++++|++.. +...+..+++.
T Consensus 82 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~ 127 (164)
T 3sz7_A 82 WSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRK 127 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999866 56666665544
No 7
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.70 E-value=2.9e-16 Score=141.07 Aligned_cols=104 Identities=9% Similarity=0.070 Sum_probs=100.5
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+..++.+|..+++.|+|++|+++|++++++ +|.+..+|.++|.||.++|+|++|++.|+++++++|+++.+++
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~ 108 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY------DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVF 108 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHH
Confidence 6889999999999999999999999999999 6778899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNR 489 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~ 489 (503)
++|.+|..+|++++|+++|+++++++|+..
T Consensus 109 ~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 109 HTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 999999999999999999999999999875
No 8
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.70 E-value=2.5e-16 Score=138.35 Aligned_cols=116 Identities=14% Similarity=0.023 Sum_probs=107.9
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
....++.+|.+|++.++|++|+++|+++|++ +|.+..+|.++|.||.++|++++|+.+|+++++++|+++.+++
T Consensus 30 ~~~~~~~la~~y~~~~~~~~A~~~~~~al~~------~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 103 (150)
T 4ga2_A 30 KSIKGFYFAKLYYEAKEYDLAKKYICTYINV------QERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVL 103 (150)
T ss_dssp HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHH
Confidence 5667889999999999999999999999999 6778899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHH-HHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 460 QRALLYESMEKYKLGAED-LRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~-LqkALkLDPen~eAk~~La~Lqkl 501 (503)
++|.+|..++++++|++. ++++++++|+++++...+.++...
T Consensus 104 ~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~ 146 (150)
T 4ga2_A 104 KIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDC 146 (150)
T ss_dssp HHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH
Confidence 999999999999988776 589999999999998888887654
No 9
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.69 E-value=2.6e-16 Score=135.53 Aligned_cols=116 Identities=15% Similarity=0.104 Sum_probs=106.7
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
....++.+|..+++.++|++|+++|++++++ +|.+..+|.++|.||.++|++++|+++|+++++++|+++.+++
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 90 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCML------DHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPF 90 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHh------CCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHH
Confidence 5778999999999999999999999999998 6677899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
.+|.+|..+|++++|+++|+++++++|++++....+.+++.+
T Consensus 91 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 132 (142)
T 2xcb_A 91 HAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAM 132 (142)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHH
Confidence 999999999999999999999999999887666555555444
No 10
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.68 E-value=4.9e-16 Score=136.76 Aligned_cols=116 Identities=14% Similarity=0.059 Sum_probs=106.2
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
....++.+|..++..|+|++|++.|++++++ +|.+..+|.++|.||.++|++++|+++|+++++++|+++.+++
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~ 93 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVL------DHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPF 93 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHc------CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHH
Confidence 5788999999999999999999999999998 6677899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
++|.+|..+|++++|+++|+++++++|++++......+++.+
T Consensus 94 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 135 (148)
T 2vgx_A 94 HAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSM 135 (148)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHH
Confidence 999999999999999999999999999876665555554443
No 11
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.68 E-value=8e-16 Score=128.31 Aligned_cols=116 Identities=20% Similarity=0.254 Sum_probs=108.7
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+..++.+|..++..++|++|+++|++++++ .+....+|.++|.|++.++++++|+.+++++++++|++..+++
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 81 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITR------NPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHF 81 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh------CcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHH
Confidence 5788999999999999999999999999998 5667899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHhh
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPS-----NRIARSTIHRLTKM 501 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPe-----n~eAk~~La~Lqkl 501 (503)
.+|.+|..++++++|++.|+++++++|+ +..+...+.++++.
T Consensus 82 ~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~ 128 (137)
T 3q49_B 82 FLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKK 128 (137)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 78888888777654
No 12
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.67 E-value=3.1e-15 Score=119.10 Aligned_cols=115 Identities=20% Similarity=0.258 Sum_probs=108.7
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+..++.+|..++..++|++|+++|++++++ .|....++.++|.|+++++++++|+..++++++++|.+..+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 76 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKL------DPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYS 76 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHH------CCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHH
Confidence 4678999999999999999999999999998 4566889999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
.+|.+|..++++++|++.|+++++++|++..+...+.++++
T Consensus 77 ~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 77 RKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999888864
No 13
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.67 E-value=1.8e-15 Score=136.26 Aligned_cols=124 Identities=20% Similarity=0.238 Sum_probs=110.9
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChh----------hHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMAT----------MMEVLSTRASCYKEVGEYKKAVADCSKVL 448 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd----------~A~aysNrAlcylrLGdyeeALedaekAL 448 (503)
..+..++.+|..+++.++|++|+++|++++++.+...+... ...+|.++|.||++++++++|+.+|++++
T Consensus 36 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al 115 (198)
T 2fbn_A 36 QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVL 115 (198)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 46778999999999999999999999999998554332111 14899999999999999999999999999
Q ss_pred HcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhhh
Q 010705 449 EQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKMV 502 (503)
Q Consensus 449 kLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~LqklL 502 (503)
+++|++.++++++|.+|+.++++++|+++|+++++++|++..+...+..+...+
T Consensus 116 ~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 169 (198)
T 2fbn_A 116 KIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKL 169 (198)
T ss_dssp HHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988887653
No 14
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=2.6e-15 Score=125.32 Aligned_cols=119 Identities=21% Similarity=0.357 Sum_probs=109.1
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+..++.+|..++..++|++|+++|++++++.+ +.+....++.+++.||++++++++|+++|+++++++|++..+++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~---~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 103 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDA---TPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALY 103 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCC---CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcc---cchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHH
Confidence 578899999999999999999999999997722 12223889999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
.+|.+|+.++++++|+++|+++++++|++..+...+.++.+.
T Consensus 104 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 104 RRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999888654
No 15
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.65 E-value=2.8e-15 Score=122.57 Aligned_cols=117 Identities=24% Similarity=0.365 Sum_probs=109.7
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVL 458 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAl 458 (503)
.....++.+|..++..++|++|+++|++++++ .+....++.++|.|++.++++++|+++++++++++|.+..++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 87 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKR------NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGY 87 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTT------CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc------CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHH
Confidence 46889999999999999999999999999987 456688999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 459 VQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 459 yrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
+.+|.+|..++++++|++.|+++++++|.+..+...+..+...
T Consensus 88 ~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 130 (133)
T 2lni_A 88 TRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMA 130 (133)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988888887654
No 16
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.64 E-value=2.5e-15 Score=152.50 Aligned_cols=124 Identities=20% Similarity=0.336 Sum_probs=113.2
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcC----------CChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSG----------DMATMMEVLSTRASCYKEVGEYKKAVADCSKVL 448 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~----------ddpd~A~aysNrAlcylrLGdyeeALedaekAL 448 (503)
..+..++.+|+.+++.++|++|+++|++||++.+... .++....+|.++|.||+++++|++|+++|+++|
T Consensus 221 ~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al 300 (370)
T 1ihg_A 221 LISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEAL 300 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 4577899999999999999999999999999655431 356788999999999999999999999999999
Q ss_pred HcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhhh
Q 010705 449 EQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKMV 502 (503)
Q Consensus 449 kLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~LqklL 502 (503)
+++|++.++++++|.+|+.+++|++|+++|+++++++|++.++...+..+++.+
T Consensus 301 ~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~ 354 (370)
T 1ihg_A 301 EIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKI 354 (370)
T ss_dssp TTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998888876643
No 17
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.64 E-value=1.4e-14 Score=117.01 Aligned_cols=118 Identities=20% Similarity=0.325 Sum_probs=110.1
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVL 458 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAl 458 (503)
..+..+..+|..++..++|++|+++|++++++ .+....++.+++.|+..++++++|++.++++++++|++..++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 83 (131)
T 2vyi_A 10 AEAERLKTEGNEQMKVENFEAAVHFYGKAIEL------NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAY 83 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhhHHHHHHHHHHHHccCHHHHHHHHHHHHHc------CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHH
Confidence 36778999999999999999999999999988 455688999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhhh
Q 010705 459 VQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKMV 502 (503)
Q Consensus 459 yrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~LqklL 502 (503)
+.+|.+|..++++++|++.|+++++++|++..+...+..+...+
T Consensus 84 ~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 127 (131)
T 2vyi_A 84 GRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKL 127 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988888876654
No 18
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.63 E-value=4.9e-15 Score=147.10 Aligned_cols=123 Identities=23% Similarity=0.330 Sum_probs=110.6
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC---------ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGD---------MATMMEVLSTRASCYKEVGEYKKAVADCSKVLE 449 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~d---------dpd~A~aysNrAlcylrLGdyeeALedaekALk 449 (503)
..+..++.+|..+++.++|++|+++|++|+++.+.... .+....+|.++|.||+++++|++|+++|+++|+
T Consensus 145 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 145 EQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999554321 122368999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 450 QDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 450 LdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
++|++.++++++|.+|+.++++++|+++|+++++++|++..+...+..+...
T Consensus 225 ~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~ 276 (336)
T 1p5q_A 225 LDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQR 276 (336)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred hCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998888877654
No 19
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.63 E-value=8.2e-15 Score=120.94 Aligned_cols=116 Identities=21% Similarity=0.190 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC---HHHHH
Q 010705 383 AAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN---VSVLV 459 (503)
Q Consensus 383 alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~---~kAly 459 (503)
.++.+|..++..++|++|++.|+++++..+ +.+....++..+|.|++++|++++|+..|+++++++|++ ..+++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p---~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYP---NGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLL 80 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCS---SSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCC---CCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHH
Confidence 577899999999999999999999998733 234445799999999999999999999999999999999 89999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
.+|.+|..+|++++|++.|+++++++|++..+...+.++..+
T Consensus 81 ~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l 122 (129)
T 2xev_A 81 KLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSI 122 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHH
Confidence 999999999999999999999999999999888877777654
No 20
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.62 E-value=3.4e-15 Score=154.73 Aligned_cols=123 Identities=29% Similarity=0.375 Sum_probs=107.0
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC---------ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGD---------MATMMEVLSTRASCYKEVGEYKKAVADCSKVLE 449 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~d---------dpd~A~aysNrAlcylrLGdyeeALedaekALk 449 (503)
..+..++.+|+.++++++|.+|+++|++||++.+.... .+....+|+++|.||+++++|++|+.+|+++|+
T Consensus 266 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 36778999999999999999999999999999664321 123378999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 450 QDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 450 LdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
++|++.++||++|.+|+.+++|++|+.+|+++++++|++..+...+..+...
T Consensus 346 ~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~ 397 (457)
T 1kt0_A 346 LDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKK 397 (457)
T ss_dssp HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888888877654
No 21
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.62 E-value=1.3e-14 Score=133.13 Aligned_cols=114 Identities=19% Similarity=0.158 Sum_probs=106.8
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHH----------------HHHHHHHcCCHHHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLST----------------RASCYKEVGEYKKAVAD 443 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysN----------------rAlcylrLGdyeeALed 443 (503)
.++.+..+|..++..|+|++|+++|++++++ +|....+|+. +|.||.++|++++|++.
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~ 76 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIAL------NIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLF 76 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh------CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHH
Confidence 3667889999999999999999999999999 6677888888 99999999999999999
Q ss_pred HHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 444 CSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 444 aekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
|+++++++|++..+++.+|.+|..+|++++|+++|+++++++|++..+...+..+.
T Consensus 77 ~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~ 132 (208)
T 3urz_A 77 YKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYY 132 (208)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888777653
No 22
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.62 E-value=2.4e-14 Score=121.65 Aligned_cols=114 Identities=24% Similarity=0.320 Sum_probs=106.0
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVL 458 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAl 458 (503)
..+..+..+|..++..++|++|+++|++++++ .+....++.++|.|++.++++++|+++++++++++|.+..++
T Consensus 11 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 84 (166)
T 1a17_A 11 KRAEELKTQANDYFKAKDYENAIKFYSQAIEL------NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGY 84 (166)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh------CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHH
Confidence 36778999999999999999999999999998 556688999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010705 459 VQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRL 498 (503)
Q Consensus 459 yrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~L 498 (503)
+.+|.+|..++++++|+++|+++++++|.+..+...+..+
T Consensus 85 ~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 124 (166)
T 1a17_A 85 YRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 124 (166)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999998877555554
No 23
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.61 E-value=1.6e-14 Score=117.00 Aligned_cols=116 Identities=23% Similarity=0.248 Sum_probs=106.2
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-----
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN----- 454 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~----- 454 (503)
.+..++.+|..++..++|++|+++|++++++ .+....++.++|.|+++++++++|+.++++++.+.|.+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 76 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKEL------DPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYR 76 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHH
Confidence 5678899999999999999999999999998 45567899999999999999999999999999998877
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhhh
Q 010705 455 --VSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKMV 502 (503)
Q Consensus 455 --~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~LqklL 502 (503)
..+++.+|.+|..++++++|+++|++++++.| +..+...+.++.+.+
T Consensus 77 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~ 125 (131)
T 1elr_A 77 QIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKIL 125 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999 688888887776653
No 24
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.61 E-value=5.8e-14 Score=112.41 Aligned_cols=117 Identities=24% Similarity=0.310 Sum_probs=108.9
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+..+..+|..++..+++++|+++|++++++ .+....++.+++.++.+.+++++|+..++++++++|.+..+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 81 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWY 81 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH------CcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHH
Confidence 4678899999999999999999999999988 4556789999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhhh
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKMV 502 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~LqklL 502 (503)
.++.+|..++++++|++.|+++++++|.+..+...+..+....
T Consensus 82 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 124 (125)
T 1na0_A 82 NLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 124 (125)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999888876543
No 25
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.60 E-value=6.6e-15 Score=125.33 Aligned_cols=102 Identities=14% Similarity=0.038 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 010705 383 AAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRA 462 (503)
Q Consensus 383 alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA 462 (503)
.++.+|..+++.|++++|++.|++++++ +|....+|.++|.|+.++|++++|+..|+++++++|++..+++.+|
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la 92 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQK------EPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALA 92 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 4678999999999999999999999998 6778899999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 010705 463 LLYESMEKYKLGAEDLRTVLKIDPSNRI 490 (503)
Q Consensus 463 ~Ay~~LGdyeeAle~LqkALkLDPen~e 490 (503)
.+|..+|++++|++.|+++++++|++..
T Consensus 93 ~~~~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 93 VSHTNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999999999998754
No 26
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.58 E-value=2.2e-14 Score=158.84 Aligned_cols=117 Identities=16% Similarity=0.145 Sum_probs=71.8
Q ss_pred cchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Q 010705 378 GVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSV 457 (503)
Q Consensus 378 ~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kA 457 (503)
...+.++.++|.++.+.|++++|++.|++||++ +|+++.+|+++|.+|.++|++++|+++|+++|+++|++..+
T Consensus 40 P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l------~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a 113 (723)
T 4gyw_A 40 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRI------SPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADA 113 (723)
T ss_dssp SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 344555566666666666666666666666655 44555666666666666666666666666666666666666
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 458 LVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 458 lyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
|+++|.+|..+|++++|+++|+++|+++|++.++...|..+..
T Consensus 114 ~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~ 156 (723)
T 4gyw_A 114 HSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQ 156 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHH
Confidence 6666666666666666666666666666666666655555544
No 27
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.58 E-value=3.8e-15 Score=130.78 Aligned_cols=108 Identities=17% Similarity=0.065 Sum_probs=97.8
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 010705 387 KGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYE 466 (503)
Q Consensus 387 lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~ 466 (503)
+|.++..++++++|++.|++++.. +|.....++++|.||+++|+|++|+++|+++|+++|+++.+|+.+|.+|.
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~------~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~ 76 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPS------PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYE 76 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCS------HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHcChHHHHHHHHHHhccc------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 678888899999999999999976 45677889999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 467 SMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 467 ~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
.++++++|+.+|+++++++|++.++...+..+..
T Consensus 77 ~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 110 (150)
T 4ga2_A 77 LEENTDKAVECYRRSVELNPTQKDLVLKIAELLC 110 (150)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999988887754
No 28
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.56 E-value=8.6e-14 Score=126.63 Aligned_cols=106 Identities=19% Similarity=0.193 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQ 460 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyr 460 (503)
+..++.+|.+++..++|++|+++|++++++.+ +.+..++.++|.|+++++++++|+++|+++++++|++..+++.
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~-----~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 81 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTN-----NQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIG 81 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT-----TCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccC-----CCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHH
Confidence 57899999999999999999999999999832 0445788889999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 010705 461 RALLYESMEKYKLGAEDLRTVLKIDPSNRIA 491 (503)
Q Consensus 461 lA~Ay~~LGdyeeAle~LqkALkLDPen~eA 491 (503)
+|.+|..++++++|++.|+++++++|++...
T Consensus 82 l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 112 (228)
T 4i17_A 82 KSAAYRDMKNNQEYIATLTEGIKAVPGNATI 112 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHCCCcHHH
Confidence 9999999999999999999999999999854
No 29
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.56 E-value=3.7e-14 Score=130.87 Aligned_cols=118 Identities=14% Similarity=0.109 Sum_probs=91.6
Q ss_pred CCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHc-----------CCHHHHHHHH
Q 010705 376 PAGVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEV-----------GEYKKAVADC 444 (503)
Q Consensus 376 ~~~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrL-----------GdyeeALeda 444 (503)
.....+.++..+|.++++.|++++|++.|++++++ +|....++.++|.++.++ |++++|++.+
T Consensus 34 ~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~------~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~ 107 (217)
T 2pl2_A 34 ENPQDPEALYWLARTQLKLGLVNPALENGKTLVAR------TPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVL 107 (217)
T ss_dssp TSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHH
Confidence 35566777777888888888888888888888877 556677788888888888 8888888888
Q ss_pred HHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 445 SKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 445 ekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
+++++++|++..+++.+|.+|..+|++++|++.|+++++++ ++.++...+..+..
T Consensus 108 ~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~ 162 (217)
T 2pl2_A 108 KDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYL 162 (217)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHH
Confidence 88888888888888888888888888888888888888888 77777777766654
No 30
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.56 E-value=1.7e-13 Score=120.35 Aligned_cols=115 Identities=17% Similarity=0.203 Sum_probs=83.5
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc---------
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ--------- 450 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkL--------- 450 (503)
.+..|.++|.+++++|+|++|+++|++||++ +|.+..+|.++|.||.+++++++|++.+++++.+
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 77 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKA------DPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYY 77 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHH
Confidence 4677888899999999999999999999888 4556677777777777777777777766665554
Q ss_pred -------------------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 451 -------------------------DDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 451 -------------------------dPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
+|.+..+++.+|.+|..+|++++|++.|+++++++|.+..+...+..+..
T Consensus 78 ~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~ 152 (184)
T 3vtx_A 78 ILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYE 152 (184)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHH
Confidence 45555566666777777777777777777777777777766666666544
No 31
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.55 E-value=6.8e-15 Score=146.48 Aligned_cols=116 Identities=18% Similarity=0.318 Sum_probs=92.5
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhH-----------------HHHHHHHHHHHHcCCHHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMM-----------------EVLSTRASCYKEVGEYKKAV 441 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A-----------------~aysNrAlcylrLGdyeeAL 441 (503)
..+..++.+|+.+++.++|.+|+.+|++|+++.+ ... .+|.++|.||+++++|++|+
T Consensus 177 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p------~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~ 250 (338)
T 2if4_A 177 GAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMG------DDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAI 250 (338)
T ss_dssp HHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSC------HHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhc------cchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 3677899999999999999999999999999843 323 48999999999999999999
Q ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 442 ADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 442 edaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
.+|+++|+++|++.++|+++|.+|+.+++|++|+++|+++++++|++..+...|..+..
T Consensus 251 ~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~ 309 (338)
T 2if4_A 251 GHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAE 309 (338)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888887743
No 32
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.55 E-value=6.5e-14 Score=155.13 Aligned_cols=118 Identities=14% Similarity=0.164 Sum_probs=112.2
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVL 458 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAl 458 (503)
..++++.++|.++.++|+|++|+++|++||++ +|+.+.+|.++|.+|.++|++++|+++|+++|+++|++..+|
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l------~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~ 80 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEV------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAY 80 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 36889999999999999999999999999999 677899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhhh
Q 010705 459 VQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKMV 502 (503)
Q Consensus 459 yrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~LqklL 502 (503)
+++|.+|..+|++++|+++|+++++++|++.++...|..+...+
T Consensus 81 ~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~ 124 (723)
T 4gyw_A 81 SNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDS 124 (723)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999988876543
No 33
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.54 E-value=1e-13 Score=121.63 Aligned_cols=114 Identities=14% Similarity=0.109 Sum_probs=102.9
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHH-HHHcCCH--HHHHHHHHHHHHcCCCCHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASC-YKEVGEY--KKAVADCSKVLEQDDTNVS 456 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlc-ylrLGdy--eeALedaekALkLdPd~~k 456 (503)
....+..+|.+++..++|++|+++|++++++. |....++.+++.+ ++..+++ ++|++.++++++++|.+..
T Consensus 43 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~ 116 (177)
T 2e2e_A 43 NSEQWALLGEYYLWQNDYSNSLLAYRQALQLR------GENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEIT 116 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH------CSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC------CCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHH
Confidence 46789999999999999999999999999994 4457899999999 8899999 9999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 457 VLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 457 AlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
+++.+|.+|..++++++|++.|+++++++|++......+..+.
T Consensus 117 ~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~ 159 (177)
T 2e2e_A 117 ALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESIN 159 (177)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Confidence 9999999999999999999999999999998865555444443
No 34
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.54 E-value=8.7e-14 Score=128.37 Aligned_cols=115 Identities=17% Similarity=0.086 Sum_probs=105.7
Q ss_pred hHHHHHHHHHHHHHh-----------CCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010705 380 TGAAAKNKGVDNQKA-----------GQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVL 448 (503)
Q Consensus 380 ~A~alk~lGn~~fkq-----------GDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekAL 448 (503)
....+..+|.++.+. |++++|++.|++++++ +|....++.++|.+|..+|++++|++.|++++
T Consensus 72 ~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~------~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 145 (217)
T 2pl2_A 72 YLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERV------NPRYAPLHLQRGLVYALLGERDKAEASLKQAL 145 (217)
T ss_dssp CHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHh------CcccHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 477889999999999 9999999999999998 66778999999999999999999999999999
Q ss_pred HcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 449 EQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 449 kLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
+++ +++.+++.+|.+|..+|++++|++.|+++++++|++..+...+..+...
T Consensus 146 ~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~~ 197 (217)
T 2pl2_A 146 ALE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLL 197 (217)
T ss_dssp HHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTC
T ss_pred hcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999999998888777543
No 35
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.51 E-value=5.7e-14 Score=111.06 Aligned_cols=102 Identities=16% Similarity=0.095 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--CHHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDT--NVSVL 458 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd--~~kAl 458 (503)
+..+..+|.+++..+++++|+++|++++++ .+....++.++|.++++++++++|++.++++++++|. +..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 79 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQL------DPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVW 79 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHh------CcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHH
Confidence 446778999999999999999999999998 4556789999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHc-CCHHHHHHHHHHHHHhCCCC
Q 010705 459 VQRALLYESM-EKYKLGAEDLRTVLKIDPSN 488 (503)
Q Consensus 459 yrlA~Ay~~L-GdyeeAle~LqkALkLDPen 488 (503)
+.+|.+|..+ +++++|+++|+++++..|.+
T Consensus 80 ~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 80 AAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 9999999999 99999999999999999875
No 36
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.51 E-value=1.5e-13 Score=125.11 Aligned_cols=122 Identities=11% Similarity=0.117 Sum_probs=72.7
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC-ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--CHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGD-MATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDT--NVS 456 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~d-dpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd--~~k 456 (503)
....+..+|.+++..++|++|++.|++++++.+.... ....+.+|.++|.++..+|++++|++.|+++++++|+ +..
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 154 (228)
T 4i17_A 75 LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTD 154 (228)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHH
Confidence 3555666666666666666666666666665221100 0011245666666666666666666666666666666 666
Q ss_pred HHHHHHHHHHHcCCH---------------------------HHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 457 VLVQRALLYESMEKY---------------------------KLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 457 AlyrlA~Ay~~LGdy---------------------------eeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
+++.+|.+|+.+++. ++|+.+|+++++++|++.++...+.+++.+
T Consensus 155 ~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~i~~~ 226 (228)
T 4i17_A 155 ALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVKAM 226 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHh
Confidence 666666666666665 666666666666666666666666666544
No 37
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.50 E-value=1.4e-13 Score=132.96 Aligned_cols=103 Identities=20% Similarity=0.291 Sum_probs=98.6
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+..++.+|..+++.|+|++|+++|++|+++ +|....+|.++|.||++++++++|+++|+++++++|++.++++
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 76 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITR------NPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHF 76 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 4678999999999999999999999999998 5667899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSN 488 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen 488 (503)
++|.+|..+|++++|++.|+++++++|++
T Consensus 77 ~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 77 FLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999999999976
No 38
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.50 E-value=7.6e-14 Score=116.25 Aligned_cols=104 Identities=19% Similarity=0.210 Sum_probs=89.6
Q ss_pred HhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHH
Q 010705 393 KAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYK 472 (503)
Q Consensus 393 kqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdye 472 (503)
..|++++|+++|++++++. .++|....++.++|.||+++|+|++|++.++++++++|++..+++.+|.+|..+|+++
T Consensus 2 ~~g~~~~A~~~~~~al~~~---~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~ 78 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASG---LQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYE 78 (117)
T ss_dssp -----CCCHHHHHHHHSSC---CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH
T ss_pred CCCcHHHHHHHHHHHHHcC---CCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHH
Confidence 4689999999999999761 1136778999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 473 LGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 473 eAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
+|++.|++++++.|++..+......+.
T Consensus 79 ~A~~~~~~al~~~p~~~~~~~~~~ai~ 105 (117)
T 3k9i_A 79 QGVELLLKIIAETSDDETIQSYKQAIL 105 (117)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHTHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 999999999999999988776555543
No 39
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.50 E-value=3e-13 Score=121.90 Aligned_cols=114 Identities=19% Similarity=0.262 Sum_probs=107.4
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
....+..+|.+++..++|++|+++|++++++ .+....++.+++.|++++|++++|+++++++++++|++..+++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 211 (258)
T 3uq3_A 138 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKR------APEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYI 211 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHH
Confidence 5778899999999999999999999999998 4556789999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHH
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKID------PSNRIARSTIHRLT 499 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLD------Pen~eAk~~La~Lq 499 (503)
.+|.+|..+|++++|++.|+++++++ |.+.++...+.++.
T Consensus 212 ~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~~ 257 (258)
T 3uq3_A 212 RKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKAS 257 (258)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHhh
Confidence 99999999999999999999999999 99999988887764
No 40
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.50 E-value=3.6e-13 Score=123.50 Aligned_cols=107 Identities=18% Similarity=0.209 Sum_probs=94.5
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 010705 387 KGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYE 466 (503)
Q Consensus 387 lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~ 466 (503)
+|.++++.|+|++|++.|++++++ +|.+..++.++|.||+.+|++++|+++|+++++++|++..+++.+|.+|+
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~ 133 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQK------APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYY 133 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999 66778999999999999999999999999999999999988888777664
Q ss_pred H-----------------------------------cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 467 S-----------------------------------MEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 467 ~-----------------------------------LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
. +++|++|+++|+++++++|+. ++...+.++.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~-~~~~~l~~i~~ 201 (208)
T 3urz_A 134 LTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST-EAQKTLDKILR 201 (208)
T ss_dssp HHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH-HHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH-HHHHHHHHHHH
Confidence 3 457899999999999999974 45566666544
No 41
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.49 E-value=2.5e-13 Score=139.16 Aligned_cols=116 Identities=17% Similarity=0.095 Sum_probs=91.6
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHcCCCCHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGE-YKKAVADCSKVLEQDDTNVSVL 458 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGd-yeeALedaekALkLdPd~~kAl 458 (503)
.+.++..+|.++.+.+++++|++.|++||++ +|....+|++|+.|+.++|+ +++|+++|+++|+++|++..+|
T Consensus 96 ~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l------~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~ 169 (382)
T 2h6f_A 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIEL------NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVW 169 (382)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHHHHCCChHHHHHHHHHHHHh------CccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHH
Confidence 5677777888888888888888888888877 56677788888888888886 8888888888888888888888
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 459 VQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 459 yrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
+++|.+|..++++++|+++|+++|+++|++..+...+..+...
T Consensus 170 ~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~ 212 (382)
T 2h6f_A 170 HHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQE 212 (382)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHH
Confidence 8888888888888888888888888888887777766665543
No 42
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.48 E-value=2.2e-13 Score=139.54 Aligned_cols=116 Identities=10% Similarity=0.064 Sum_probs=109.5
Q ss_pred hHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQ-YADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVL 458 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGD-Y~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAl 458 (503)
...++..+|.++...++ |++|+++|++||++ +|....+|++|+.|+..+|++++|+.+|+++|+++|++..+|
T Consensus 130 ~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l------~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~ 203 (382)
T 2h6f_A 130 NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEE------QPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAW 203 (382)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHH
Confidence 57889999999999997 99999999999999 677889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 459 VQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 459 yrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
+++|.+|..+|++++|+++|+++|+++|.+..+...+..+...
T Consensus 204 ~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 204 QHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN 246 (382)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998888777544
No 43
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.48 E-value=7.1e-13 Score=118.35 Aligned_cols=113 Identities=18% Similarity=0.171 Sum_probs=101.4
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH----
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNV---- 455 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~---- 455 (503)
.+..+..+|.+++..++|++|+++|++++++ ++....+|.++|.||+++|++++|+++|++++++.|.+.
T Consensus 36 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 109 (213)
T 1hh8_A 36 HSRICFNIGCMYTILKNMTEAEKAFTRSINR------DKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDY 109 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEEC
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHH
Confidence 4678999999999999999999999999998 566789999999999999999999999999999888766
Q ss_pred ------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHH
Q 010705 456 ------------SVLVQRALLYESMEKYKLGAEDLRTVLKIDPSN--RIARSTIHRL 498 (503)
Q Consensus 456 ------------kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen--~eAk~~La~L 498 (503)
.+++++|.+|..+|++++|+++|+++++++|++ ..+...+..+
T Consensus 110 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~ 166 (213)
T 1hh8_A 110 KILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECV 166 (213)
T ss_dssp GGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGGGHHHHHHHHH
T ss_pred HHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccccchHHHHHHHH
Confidence 999999999999999999999999999999965 3444444444
No 44
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.48 E-value=1.8e-12 Score=104.11 Aligned_cols=112 Identities=23% Similarity=0.274 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHH
Q 010705 382 AAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQR 461 (503)
Q Consensus 382 ~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrl 461 (503)
..+..+|..++..+++++|+++|++++++ .+....++..++.++...+++++|++.+++++++.|....+++.+
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 75 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALEL------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNL 75 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHc------CCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHH
Confidence 35677888888999999999999998877 344567888889999999999999999999999888888888889
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 462 ALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 462 A~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
+.+|..++++++|++.|++++++.|.+..+...+..+.
T Consensus 76 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 113 (136)
T 2fo7_A 76 GNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAY 113 (136)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 99999999999999999999999888877766666554
No 45
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.48 E-value=9.4e-14 Score=128.47 Aligned_cols=104 Identities=11% Similarity=0.105 Sum_probs=95.8
Q ss_pred HHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHcCCCCHHHHHHH
Q 010705 392 QKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEY----------KKAVADCSKVLEQDDTNVSVLVQR 461 (503)
Q Consensus 392 fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdy----------eeALedaekALkLdPd~~kAlyrl 461 (503)
.+.+.|++|++.|++|+++ +|.++++|.++|.|+++++++ ++|+..|++||+++|++..+||++
T Consensus 13 ~r~~~feeA~~~~~~Ai~l------~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~L 86 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKS------NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCI 86 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHH
Confidence 4667899999999999999 778899999999999999875 599999999999999999999999
Q ss_pred HHHHHHcC-----------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 462 ALLYESME-----------KYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 462 A~Ay~~LG-----------dyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
|.+|..++ ++++|+++|+++|+++|++...++.+..+.+.
T Consensus 87 G~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka 137 (158)
T 1zu2_A 87 GNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKA 137 (158)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTH
T ss_pred HHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhC
Confidence 99999885 89999999999999999999999888877654
No 46
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.48 E-value=1.8e-12 Score=113.70 Aligned_cols=101 Identities=17% Similarity=0.146 Sum_probs=80.9
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 010705 384 AKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRAL 463 (503)
Q Consensus 384 lk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~ 463 (503)
+..+|..+...+++++|++.+.+++++ .+....++..+|.+|.++|++++|++.|+++++++|.++.+++++|.
T Consensus 76 ~~~~~~~~~~~~~~~~a~~~~~~a~~~------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~ 149 (184)
T 3vtx_A 76 YYILGSANFMIDEKQAAIDALQRAIAL------NTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGL 149 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh------CccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHH
Confidence 333344444444444444444444443 45667889999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 010705 464 LYESMEKYKLGAEDLRTVLKIDPSNRI 490 (503)
Q Consensus 464 Ay~~LGdyeeAle~LqkALkLDPen~e 490 (503)
+|..+|++++|+++|+++|+++|++..
T Consensus 150 ~~~~~g~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 150 AYEGKGLRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHhCCccCHH
Confidence 999999999999999999999997654
No 47
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.47 E-value=4e-12 Score=108.18 Aligned_cols=116 Identities=16% Similarity=0.207 Sum_probs=106.7
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
....+..+|..++..+++++|+++|++++++ .+....++.+++.++...+++++|++.++++++++|.+..+++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 114 (186)
T 3as5_A 41 DVDVALHLGIAYVKTGAVDRGTELLERSLAD------APDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRF 114 (186)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHH
Confidence 4778899999999999999999999999988 4566789999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
.+|.+|..++++++|++.|+++++++|.+..+...+..+...
T Consensus 115 ~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 156 (186)
T 3as5_A 115 RLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQ 156 (186)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 999999999999999999999999999998888777766543
No 48
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.46 E-value=1.8e-12 Score=118.53 Aligned_cols=109 Identities=22% Similarity=0.195 Sum_probs=102.4
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVL 458 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAl 458 (503)
..+..+..+|.+++..+++++|+++|++++++ .|....++.++|.+|.++|++++|+++++++++++|.+..++
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 114 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAI------RPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAH 114 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHH
Confidence 46889999999999999999999999999998 556788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 010705 459 VQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARS 493 (503)
Q Consensus 459 yrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~ 493 (503)
+.+|.+|..+|++++|++.|+++++++|++.....
T Consensus 115 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (275)
T 1xnf_A 115 LNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSL 149 (275)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHH
Confidence 99999999999999999999999999999975443
No 49
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.44 E-value=4e-12 Score=114.49 Aligned_cols=121 Identities=12% Similarity=0.095 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh--------------------cCCChhhHHHHHHHHHHHHHcCCHHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEK--------------------SGDMATMMEVLSTRASCYKEVGEYKKA 440 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk--------------------~~ddpd~A~aysNrAlcylrLGdyeeA 440 (503)
+..+..+|.++...+++++|+++|++++++.+. ....+....++.++|.+++.+|++++|
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 158 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNA 158 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHH
Confidence 678999999999999999999999999985221 003577889999999999999999999
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 441 VADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 441 LedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
++.++++++++|.+..+++.+|.+|..++++++|++.|+++++++|++..+...+..+...
T Consensus 159 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 219 (258)
T 3uq3_A 159 VKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA 219 (258)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988888776543
No 50
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.44 E-value=5e-12 Score=113.48 Aligned_cols=114 Identities=15% Similarity=0.090 Sum_probs=92.2
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
....+..+|.+++..+++++|+++|++++++ .+....++..++.++..++++++|++.++++++++|.+..+++
T Consensus 56 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 129 (243)
T 2q7f_A 56 DAIPYINFANLLSSVNELERALAFYDKALEL------DSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFY 129 (243)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc------CCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHH
Confidence 3667788888888888888888888888877 4455678888888888888888888888888888888888888
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
.+|.+|..++++++|++.|+++++++|++..+...+..+.
T Consensus 130 ~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 169 (243)
T 2q7f_A 130 MLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCL 169 (243)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 8888888888888888888888888888777766666554
No 51
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.44 E-value=1.5e-13 Score=143.69 Aligned_cols=114 Identities=24% Similarity=0.326 Sum_probs=105.9
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+..++.+|..++++++|++|+++|++|+++ .|....+|.++|.||++++++++|+++|+++++++|++..+++
T Consensus 5 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~ 78 (477)
T 1wao_1 5 RAEELKTQANDYFKAKDYENAIKFYSQAIEL------NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYY 78 (477)
T ss_dssp HHTTSSSSSSSTTTTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 4556777889999999999999999999998 5667899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
++|.+|..++++++|++.|+++++++|++.++...+..+.
T Consensus 79 ~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~ 118 (477)
T 1wao_1 79 RRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 118 (477)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999988887777663
No 52
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.43 E-value=1.8e-12 Score=115.74 Aligned_cols=101 Identities=20% Similarity=0.234 Sum_probs=93.8
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+..++.+|..++..++|++|++.|+++++ + ...++.++|.||+++|++++|+++|+++++++|.+..+++
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~--------~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 75 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQD--------P-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYF 75 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSSS--------C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHcC--------C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHH
Confidence 455688999999999999999999999961 1 4679999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNR 489 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~ 489 (503)
.+|.+|..++++++|+++|++++++.|++.
T Consensus 76 ~lg~~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 76 QRGMLYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 999999999999999999999999999876
No 53
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.43 E-value=1.8e-12 Score=135.55 Aligned_cols=116 Identities=7% Similarity=-0.050 Sum_probs=108.4
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+..+..+|..++..++|++|+++|++++++ +|....++.++|.+|+++|++++|+++|+++++++|++..+++
T Consensus 22 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 95 (568)
T 2vsy_A 22 DFVAWLMLADAELGMGDTTAGEMAVQRGLAL------HPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIAL 95 (568)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 4788999999999999999999999999988 5667899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
.+|.+|..+|++++|++.|+++++++|++..+...+..+...
T Consensus 96 ~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 137 (568)
T 2vsy_A 96 WLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRR 137 (568)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999888888777654
No 54
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.43 E-value=4.2e-12 Score=119.20 Aligned_cols=116 Identities=17% Similarity=0.247 Sum_probs=103.6
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Q 010705 385 KNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALL 464 (503)
Q Consensus 385 k~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~A 464 (503)
..+|..+++.+++++|+++|++++++.+. +......++..++.|+.++|++++|++.|+++++++|++..+++.+|.+
T Consensus 238 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 315 (359)
T 3ieg_A 238 IESAEELIRDGRYTDATSKYESVMKTEPS--VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEA 315 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCC--chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 45689999999999999999999988432 1122345688899999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhhh
Q 010705 465 YESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKMV 502 (503)
Q Consensus 465 y~~LGdyeeAle~LqkALkLDPen~eAk~~La~LqklL 502 (503)
|..+|++++|+++|+++++++|++..+...+.+++.++
T Consensus 316 ~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~ 353 (359)
T 3ieg_A 316 YLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLL 353 (359)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887664
No 55
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.42 E-value=2e-12 Score=120.66 Aligned_cols=121 Identities=14% Similarity=0.193 Sum_probs=110.5
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCC---hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDM---ATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVS 456 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~dd---pd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~k 456 (503)
....+..+|.+++..+++++|+++|++++++.++..+. +....++.++|.+|.++|++++|++.++++++++|++..
T Consensus 192 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 271 (330)
T 3hym_B 192 DPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNAS 271 (330)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSH
T ss_pred ChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchH
Confidence 46788999999999999999999999999987654332 455789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 457 VLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 457 AlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
+++.+|.+|..+|++++|+++|+++++++|++..+...+..+..
T Consensus 272 ~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 315 (330)
T 3hym_B 272 TYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIE 315 (330)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998888763
No 56
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.41 E-value=3.4e-12 Score=108.59 Aligned_cols=116 Identities=22% Similarity=0.262 Sum_probs=106.4
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVL 458 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAl 458 (503)
..+..+..+|..++..+++++|+++|++++++ .+....++..++.++...+++++|++.++++++++|.+..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 79 (186)
T 3as5_A 6 IRQVYYRDKGISHAKAGRYSQAVMLLEQVYDA------DAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVA 79 (186)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCT------TSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------CccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHH
Confidence 35778889999999999999999999999876 445678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 459 VQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 459 yrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
+.+|.+|..++++++|++.|+++++++|.+..+...+..+..
T Consensus 80 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 121 (186)
T 3as5_A 80 TVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALD 121 (186)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHH
Confidence 999999999999999999999999999999888777776643
No 57
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.41 E-value=1.3e-13 Score=110.53 Aligned_cols=96 Identities=17% Similarity=0.210 Sum_probs=88.6
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-----
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN----- 454 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~----- 454 (503)
.+..++.+|..++..++|++|+++|++++++ .|....++.++|.|++++|++++|+++|+++++++|++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 76 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITA------QPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAI 76 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHH
Confidence 4678999999999999999999999999998 55678999999999999999999999999999999999
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 010705 455 -VSVLVQRALLYESMEKYKLGAEDLRTV 481 (503)
Q Consensus 455 -~kAlyrlA~Ay~~LGdyeeAle~LqkA 481 (503)
.+++++++.++..++++++|++.|+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 77 RSKLQYRLELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHHHHHHHHhHhhhHhHHHHh
Confidence 999999999999999999988877643
No 58
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.41 E-value=7.8e-12 Score=112.22 Aligned_cols=116 Identities=11% Similarity=0.029 Sum_probs=100.7
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
....+..+|.+++..+++++|+++|++++++ .+....++..++.+++++|++++|++.++++++++|.+..+++
T Consensus 90 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 163 (243)
T 2q7f_A 90 AATAYYGAGNVYVVKEMYKEAKDMFEKALRA------GMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARF 163 (243)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------TCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred chHHHHHHHHHHHHhccHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHH
Confidence 4677888999999999999999999999988 3445678888999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
.+|.+|..++++++|++.|+++++++|++..+...+..+...
T Consensus 164 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 205 (243)
T 2q7f_A 164 QFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAY 205 (243)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 999999999999999999999999999888887777766543
No 59
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.40 E-value=5.1e-12 Score=120.78 Aligned_cols=116 Identities=14% Similarity=0.117 Sum_probs=106.8
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+..+..+|.++++.|++++|+++|++++++ .+....++.+++.++.++|++++|++.|+++++++|++..+++
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 289 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSV------RPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRY 289 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 4778899999999999999999999999998 5566789999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----------HHHHHHHHHHHhh
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSN-----------RIARSTIHRLTKM 501 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen-----------~eAk~~La~Lqkl 501 (503)
.+|.+|..+|++++|++.|+++++++|++ ..+...+..+...
T Consensus 290 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 342 (368)
T 1fch_A 290 NLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSM 342 (368)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999988 7777777766544
No 60
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.39 E-value=5.1e-12 Score=118.68 Aligned_cols=111 Identities=25% Similarity=0.238 Sum_probs=103.7
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.++.+..+|..++..|+|++|+++|++++++ .|....++.++|.|++.+|++++|++.++++++++|++..+++
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 75 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDG------DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARL 75 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHH
Confidence 4678999999999999999999999999998 5567889999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC---CCHHHHHHHH
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDP---SNRIARSTIH 496 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDP---en~eAk~~La 496 (503)
.+|.+|..++++++|++.|+++++++| ++..+...+.
T Consensus 76 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~ 115 (359)
T 3ieg_A 76 QRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLV 115 (359)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHH
Confidence 999999999999999999999999999 7777766664
No 61
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.39 E-value=4.1e-12 Score=122.65 Aligned_cols=103 Identities=13% Similarity=0.141 Sum_probs=95.8
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+..+..+|.++...+++++|+++|++++++ .|....+|.+++.+|.++|++++|++.|+++++++|++..+++
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 285 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTV------RPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRY 285 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHH
Confidence 4678889999999999999999999999988 5566889999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSN 488 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen 488 (503)
.+|.+|..+|++++|++.|+++++++|++
T Consensus 286 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 286 NLGISCINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999999999874
No 62
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.38 E-value=2.9e-12 Score=119.48 Aligned_cols=113 Identities=13% Similarity=0.180 Sum_probs=100.4
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC---HH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN---VS 456 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~---~k 456 (503)
.+..++.+|..+++.|+|++|++.|+++++.. ++.+....+++.+|.||+++|++++|+..|++++++.|++ ..
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~---p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~ 90 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYG---RTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQ 90 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC---SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC---CCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHH
Confidence 57889999999999999999999999999763 2233448899999999999999999999999999998854 67
Q ss_pred HHHHHHHHHHH--------cCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010705 457 VLVQRALLYES--------MEKYKLGAEDLRTVLKIDPSNRIARSTI 495 (503)
Q Consensus 457 AlyrlA~Ay~~--------LGdyeeAle~LqkALkLDPen~eAk~~L 495 (503)
+++.+|.+|+. ++++++|++.|+++++++|++..+...+
T Consensus 91 a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 137 (261)
T 3qky_A 91 AEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDAT 137 (261)
T ss_dssp HHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHH
T ss_pred HHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHH
Confidence 99999999999 9999999999999999999986665443
No 63
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.38 E-value=9.2e-12 Score=99.95 Aligned_cols=103 Identities=24% Similarity=0.322 Sum_probs=95.8
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
....+..++..++..+++++|+++|++++++ .+....++.+++.++.+.+++++|++.+++++++.|....+++
T Consensus 34 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 107 (136)
T 2fo7_A 34 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWY 107 (136)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred chhHHHHHHHHHHHhcCHHHHHHHHHHHHHH------CCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHH
Confidence 3667888999999999999999999999988 4456788999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSN 488 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen 488 (503)
.++.+|..++++++|++.|+++++++|++
T Consensus 108 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 108 NLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999999863
No 64
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.37 E-value=6.7e-13 Score=119.14 Aligned_cols=97 Identities=13% Similarity=0.058 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 010705 400 AIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLR 479 (503)
Q Consensus 400 AIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~Lq 479 (503)
+-..|++++++ +|.+..+++++|.+++++|+|++|++.|+++++++|+++.+|+.+|.+|..+|+|++|+++|+
T Consensus 21 ~~~~l~~al~l------~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~ 94 (151)
T 3gyz_A 21 SGATLKDINAI------PDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYA 94 (151)
T ss_dssp TSCCTGGGCCS------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCHHHHhCC------CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 33455666655 778899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHhhh
Q 010705 480 TVLKIDPSNRIARSTIHRLTKMV 502 (503)
Q Consensus 480 kALkLDPen~eAk~~La~LqklL 502 (503)
++++++|++..+...+..+...+
T Consensus 95 ~al~l~P~~~~~~~~lg~~~~~l 117 (151)
T 3gyz_A 95 VAFALGKNDYTPVFHTGQCQLRL 117 (151)
T ss_dssp HHHHHSSSCCHHHHHHHHHHHHT
T ss_pred HHHhhCCCCcHHHHHHHHHHHHc
Confidence 99999999999998888876543
No 65
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.37 E-value=7.8e-12 Score=116.52 Aligned_cols=117 Identities=18% Similarity=0.136 Sum_probs=102.0
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHH--------cCCHHHHHHHHHHHHHcC
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKE--------VGEYKKAVADCSKVLEQD 451 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylr--------LGdyeeALedaekALkLd 451 (503)
...+++.+|.++++.++|++|++.|++++++.|. .+....+++.+|.|+++ ++++++|++.|+++++++
T Consensus 51 ~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~---~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~ 127 (261)
T 3qky_A 51 AADAQFYLARAYYQNKEYLLAASEYERFIQIYQI---DPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY 127 (261)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCC---CchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC
Confidence 3778999999999999999999999999998443 45667899999999999 999999999999999999
Q ss_pred CCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHH
Q 010705 452 DTNVSVL-----------------VQRALLYESMEKYKLGAEDLRTVLKIDPSN---RIARSTIHRLT 499 (503)
Q Consensus 452 Pd~~kAl-----------------yrlA~Ay~~LGdyeeAle~LqkALkLDPen---~eAk~~La~Lq 499 (503)
|++..+. +.+|.+|+.+|+|++|+..|+++++++|++ .++...+..+.
T Consensus 128 p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~ 195 (261)
T 3qky_A 128 PNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAY 195 (261)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHH
T ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHH
Confidence 9886555 899999999999999999999999999985 44555554443
No 66
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.37 E-value=1.7e-11 Score=108.11 Aligned_cols=115 Identities=13% Similarity=0.010 Sum_probs=95.9
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH--cCCCCHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEV-GEYKKAVADCSKVLE--QDDTNVS 456 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrL-GdyeeALedaekALk--LdPd~~k 456 (503)
....+..+|.+++..+++++|+++|++++++ .+....++.+++.++..+ +++++|++.++++++ .+|....
T Consensus 41 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 114 (225)
T 2vq2_A 41 NELAWLVRAEIYQYLKVNDKAQESFRQALSI------KPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYI 114 (225)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHH
T ss_pred chHHHHHHHHHHHHcCChHHHHHHHHHHHHh------CCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHH
Confidence 4667888888888888888888888888887 445677888888888888 899999999998888 5666688
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 457 VLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 457 AlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
+++.+|.+|..++++++|++.|+++++++|++..+...+..+..
T Consensus 115 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 158 (225)
T 2vq2_A 115 ANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKM 158 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHH
Confidence 88888999999999999999999999988888888777776654
No 67
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.37 E-value=8e-12 Score=114.72 Aligned_cols=115 Identities=20% Similarity=0.157 Sum_probs=88.7
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+.++..+|.++...+++++|+++|++++++ .+....++.++|.||..+|++++|+++++++++++|.+..+++
T Consensus 73 ~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 146 (272)
T 3u4t_A 73 KSADFEYYGKILMKKGQDSLAIQQYQAAVDR------DTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFY 146 (272)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------STTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHhc------CcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHH
Confidence 4566778888888888888888888888877 4455678888888888888888888888888888888888888
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
.+|.+++..+++++|++.|+++++++|++..+...+..+..
T Consensus 147 ~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~ 187 (272)
T 3u4t_A 147 ELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARANA 187 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 88844444558888888888888888888776666665543
No 68
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.37 E-value=7.3e-12 Score=115.58 Aligned_cols=112 Identities=13% Similarity=0.091 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH---
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVS--- 456 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~k--- 456 (503)
.+..++.+|..++..|+|++|++.|+++++..|. .+....+++++|.||+++|++++|++.|+++++++|++..
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~---~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~ 79 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPF---GPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDY 79 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHH
Confidence 3567899999999999999999999999987432 3445689999999999999999999999999999998864
Q ss_pred HHHHHHHHHHH------------------cCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 010705 457 VLVQRALLYES------------------MEKYKLGAEDLRTVLKIDPSNRIARST 494 (503)
Q Consensus 457 AlyrlA~Ay~~------------------LGdyeeAle~LqkALkLDPen~eAk~~ 494 (503)
++|.+|.+|.. ++++++|+..|+++++++|++..+...
T Consensus 80 a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a 135 (225)
T 2yhc_A 80 VMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDA 135 (225)
T ss_dssp HHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHH
T ss_pred HHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHH
Confidence 89999999987 578999999999999999999765443
No 69
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.37 E-value=5.2e-12 Score=114.60 Aligned_cols=122 Identities=22% Similarity=0.245 Sum_probs=107.7
Q ss_pred cchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----
Q 010705 378 GVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKS--GDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ----- 450 (503)
Q Consensus 378 ~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~--~ddpd~A~aysNrAlcylrLGdyeeALedaekALkL----- 450 (503)
...+..+..+|.+++..++|++|+++|++++++..+. .+.+....++.++|.||..+|++++|++++++++++
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 119 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVL 119 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHc
Confidence 3478899999999999999999999999999997665 556788999999999999999999999999999998
Q ss_pred ---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHH
Q 010705 451 ---DDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKI--------DPSNRIARSTIHRLT 499 (503)
Q Consensus 451 ---dPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkL--------DPen~eAk~~La~Lq 499 (503)
+|....+++.+|.+|..++++++|++.|++++++ +|....+...+..+.
T Consensus 120 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 179 (283)
T 3edt_B 120 GKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCY 179 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 4667889999999999999999999999999999 665566666666554
No 70
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.36 E-value=1.5e-11 Score=111.87 Aligned_cols=114 Identities=15% Similarity=0.031 Sum_probs=90.4
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--cCCCCHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLE--QDDTNVSV 457 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALk--LdPd~~kA 457 (503)
....+..+|.+++..+++++|+++|++++++ .+....++.+++.+|+.+|++++|++.++++++ ..|....+
T Consensus 70 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 143 (252)
T 2ho1_A 70 SADAHAALAVVFQTEMEPKLADEEYRKALAS------DSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRV 143 (252)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH------CcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHH
Confidence 3677888899999999999999999998887 344567778888888888888888888888887 67777778
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 458 LVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 458 lyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
++.+|.+|..++++++|++.|+++++++|.+..+...+..+.
T Consensus 144 ~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 185 (252)
T 2ho1_A 144 FENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLL 185 (252)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 888888888888888888888888888887777766666554
No 71
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.36 E-value=7.2e-12 Score=124.82 Aligned_cols=121 Identities=12% Similarity=0.025 Sum_probs=103.6
Q ss_pred cchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcC---CChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC---
Q 010705 378 GVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSG---DMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQD--- 451 (503)
Q Consensus 378 ~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~---ddpd~A~aysNrAlcylrLGdyeeALedaekALkLd--- 451 (503)
...+..+..+|.+++.+|+|++|+++|++|+++.++.. .++..+..|.|+|.+|..+|++++|+.++++++++.
T Consensus 48 ~~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~ 127 (472)
T 4g1t_A 48 EFKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKF 127 (472)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhc
Confidence 33577888999999999999999999999999977533 245678889999999999999999999999999873
Q ss_pred -----CCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010705 452 -----DTNVSVLVQRALLYESME--KYKLGAEDLRTVLKIDPSNRIARSTIHRL 498 (503)
Q Consensus 452 -----Pd~~kAlyrlA~Ay~~LG--dyeeAle~LqkALkLDPen~eAk~~La~L 498 (503)
+..+.++..+|.++..++ +|++|+++|+++++++|+++++...+..+
T Consensus 128 ~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~ 181 (472)
T 4g1t_A 128 SSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIA 181 (472)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 456889999998887764 69999999999999999999887776655
No 72
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.36 E-value=3.3e-12 Score=132.47 Aligned_cols=115 Identities=15% Similarity=0.145 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHHh---------CCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHc--------CCHHHHHHH
Q 010705 381 GAAAKNKGVDNQKA---------GQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEV--------GEYKKAVAD 443 (503)
Q Consensus 381 A~alk~lGn~~fkq---------GDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrL--------GdyeeALed 443 (503)
...+..+|.+++.. ++|++|+++|++|+++ +|.+..+|.++|.+|+.+ +++++|+++
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~ 243 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM------DVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSA 243 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHH
Confidence 57888999999999 9999999999999999 567789999999999999 999999999
Q ss_pred HHHHHHcCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 444 CSKVLEQDD---TNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 444 aekALkLdP---d~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
|+++++++| .++.+++++|.+|..+|+|++|+++|+++++++|++.++...+..+...
T Consensus 244 ~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~ 304 (474)
T 4abn_A 244 YAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEF 304 (474)
T ss_dssp HHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 999999999 9999999999999999999999999999999999999888877776544
No 73
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.36 E-value=2.3e-11 Score=107.28 Aligned_cols=120 Identities=10% Similarity=-0.032 Sum_probs=102.1
Q ss_pred CcchHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Q 010705 377 AGVTGAAAKNKGVDNQKA-GQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNV 455 (503)
Q Consensus 377 ~~~~A~alk~lGn~~fkq-GDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~ 455 (503)
.......+..+|..++.. +++++|+++|+++++ .+..+....++.+++.++.++|++++|++.++++++++|.+.
T Consensus 72 ~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 147 (225)
T 2vq2_A 72 KPDSAEINNNYGWFLCGRLNRPAESMAYFDKALA----DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFP 147 (225)
T ss_dssp CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHT----STTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred CCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHc----CcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCc
Confidence 345667788889999999 999999999999986 223566778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHh
Q 010705 456 SVLVQRALLYESMEKYKLGAEDLRTVLKIDP-SNRIARSTIHRLTK 500 (503)
Q Consensus 456 kAlyrlA~Ay~~LGdyeeAle~LqkALkLDP-en~eAk~~La~Lqk 500 (503)
.+++.++.+|..++++++|++.|+++++++| .+..+...+..+..
T Consensus 148 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (225)
T 2vq2_A 148 PAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAK 193 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 88888776666644
No 74
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.35 E-value=1.9e-11 Score=111.33 Aligned_cols=117 Identities=16% Similarity=0.019 Sum_probs=103.9
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
....+..+|..++..+++++|+++|+++++ .+..+....++.+++.+++++|++++|++.++++++++|.+..+++
T Consensus 104 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~----~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 179 (252)
T 2ho1_A 104 NARVLNNYGGFLYEQKRYEEAYQRLLEASQ----DTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVAL 179 (252)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHTT----CTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred cHHHHHHHHHHHHHHhHHHHHHHHHHHHHh----CccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHH
Confidence 467788899999999999999999999986 1225677889999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
.++.+|..++++++|++.|+++++++|.+..+...+..+..
T Consensus 180 ~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (252)
T 2ho1_A 180 EMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAK 220 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999888777766644
No 75
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.35 E-value=2e-11 Score=113.81 Aligned_cols=116 Identities=18% Similarity=0.213 Sum_probs=106.4
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
....+..+|.++++.+++++|+++|++++++ .+....++.+++.++..+|++++|++.++++++++|++..+++
T Consensus 171 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 244 (327)
T 3cv0_A 171 DAQLHASLGVLYNLSNNYDSAAANLRRAVEL------RPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMY 244 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Confidence 4678899999999999999999999999988 4566789999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC------------CHHHHHHHHHHHhh
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPS------------NRIARSTIHRLTKM 501 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPe------------n~eAk~~La~Lqkl 501 (503)
.+|.+|..+|++++|++.|+++++++|+ +..+...+..+...
T Consensus 245 ~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 298 (327)
T 3cv0_A 245 NMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNV 298 (327)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999 67777777766543
No 76
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.35 E-value=1.6e-11 Score=101.63 Aligned_cols=107 Identities=20% Similarity=0.189 Sum_probs=86.2
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-----
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN----- 454 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~----- 454 (503)
.+..+..+|..++..++|++|+++|++++++.++..+....+.++.++|.++..+|++++|++++++++++.+..
T Consensus 8 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 87 (164)
T 3ro3_A 8 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAV 87 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHH
Confidence 566778888888888888888888888888877766556666788888888888888888888888888775432
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 010705 455 -VSVLVQRALLYESMEKYKLGAEDLRTVLKIDP 486 (503)
Q Consensus 455 -~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDP 486 (503)
..+++.+|.+|..++++++|++.|++++++.+
T Consensus 88 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 88 EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 55788888888888888888888888887743
No 77
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.35 E-value=1.3e-11 Score=119.25 Aligned_cols=117 Identities=16% Similarity=0.119 Sum_probs=104.1
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHH--------------
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCS-------------- 445 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedae-------------- 445 (503)
....+..+|..+...|++++|++.|++++++ +|....++.++|.+++++|++++|++.++
T Consensus 116 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~------~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~ 189 (287)
T 3qou_A 116 EEELXAQQAMQLMQESNYTDALPLLXDAWQL------SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGL 189 (287)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHH
T ss_pred chhhHHHHHHHHHhCCCHHHHHHHHHHHHHh------CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHH
Confidence 5678899999999999999999999999998 66778999999999999999998865544
Q ss_pred --------------------HHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHhhh
Q 010705 446 --------------------KVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSN--RIARSTIHRLTKMV 502 (503)
Q Consensus 446 --------------------kALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen--~eAk~~La~LqklL 502 (503)
++++++|++..+++.+|.+|..+|++++|++.|+++++++|++ ..++..+..+.+.+
T Consensus 190 ~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~ 268 (287)
T 3qou_A 190 VAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAAL 268 (287)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHc
Confidence 4567789999999999999999999999999999999999998 78888888776654
No 78
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.34 E-value=1.2e-11 Score=118.99 Aligned_cols=111 Identities=14% Similarity=0.108 Sum_probs=100.2
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHcCCCC----
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEV-GEYKKAVADCSKVLEQDDTN---- 454 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrL-GdyeeALedaekALkLdPd~---- 454 (503)
.+.++.++|.++.+.|+|++|+++|++|+++.++.++....+.+|.++|.+|..+ |++++|+++|++++++.|..
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~ 155 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVA 155 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChH
Confidence 4778999999999999999999999999999887766555678999999999996 99999999999999998754
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 010705 455 --VSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRI 490 (503)
Q Consensus 455 --~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~e 490 (503)
..+++++|.+|..+|+|++|+++|++++++.|++..
T Consensus 156 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 156 LSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 567899999999999999999999999999998743
No 79
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.34 E-value=1.1e-11 Score=106.31 Aligned_cols=86 Identities=13% Similarity=0.198 Sum_probs=81.6
Q ss_pred ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010705 417 MATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIH 496 (503)
Q Consensus 417 dpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La 496 (503)
+|..++.+.++|.+|++.|+|++|++.|+++|+++|.++.+++++|.+|..+|++++|+++|+++++++|++..+...+.
T Consensus 9 nP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg 88 (126)
T 4gco_A 9 NPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKA 88 (126)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHH
Confidence 68889999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHhhh
Q 010705 497 RLTKMV 502 (503)
Q Consensus 497 ~LqklL 502 (503)
.+...+
T Consensus 89 ~~~~~~ 94 (126)
T 4gco_A 89 ACLVAM 94 (126)
T ss_dssp HHHHHT
T ss_pred HHHHHC
Confidence 776543
No 80
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.34 E-value=1.1e-11 Score=120.86 Aligned_cols=114 Identities=21% Similarity=0.138 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQ 460 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyr 460 (503)
...+..+|..+.+.|++++|+++|++++++ .|....++.+++.++.+.|++++|++.++++++++|++..+++.
T Consensus 271 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 344 (388)
T 1w3b_A 271 PDAYCNLANALKEKGSVAEAEDCYNTALRL------CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSN 344 (388)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 344555555555555555555555555555 33344555556666666666666666666666666666666666
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 461 RALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 461 lA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
++.+|..+|++++|++.|+++++++|++..+...+..+..
T Consensus 345 l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~a~~~lg~~~~ 384 (388)
T 1w3b_A 345 LASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLK 384 (388)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHhHHHHHH
Confidence 6666666666666666666666666666655555555443
No 81
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.34 E-value=2.2e-11 Score=124.79 Aligned_cols=121 Identities=18% Similarity=0.224 Sum_probs=108.8
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhh-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATM-MEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVL 458 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~-A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAl 458 (503)
....+..++..+.+.|++++|+++|++++++.++.+.++.. ..+|..++.+|.+.|++++|++.++++++++|++..++
T Consensus 474 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~ 553 (597)
T 2xpi_A 474 DPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVH 553 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHH
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHH
Confidence 35678888999999999999999999999987765555654 78999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 459 VQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 459 yrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
+.++.+|..+|++++|++.|+++++++|++..+...+..+..
T Consensus 554 ~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~ 595 (597)
T 2xpi_A 554 TAIALVYLHKKIPGLAITHLHESLAISPNEIMASDLLKRALE 595 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHh
Confidence 999999999999999999999999999999999888887643
No 82
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.33 E-value=8.2e-12 Score=120.52 Aligned_cols=110 Identities=10% Similarity=0.048 Sum_probs=96.3
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChh--hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 010705 386 NKGVDNQKAGQYADAIKWLSWAVILLEKSGDMAT--MMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRAL 463 (503)
Q Consensus 386 ~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd--~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~ 463 (503)
.+|..+.+.+++++|+++|++++++ .|. ...++.+++.+|.++|++++|++.|+++++++|++..+++.+|.
T Consensus 182 ~l~~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 255 (365)
T 4eqf_A 182 RMSKSPVDSSVLEGVKELYLEAAHQ------NGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGA 255 (365)
T ss_dssp -------CCHHHHHHHHHHHHHHHH------SCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHh------CcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 4588889999999999999999998 344 67899999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 464 LYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 464 Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
+|..+|++++|++.|+++++++|++..+...+..+...
T Consensus 256 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 293 (365)
T 4eqf_A 256 TLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCIN 293 (365)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999988888777544
No 83
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.33 E-value=1.9e-11 Score=120.47 Aligned_cols=111 Identities=26% Similarity=0.245 Sum_probs=103.7
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+..+..+|..+++.++|++|+++|++++++ .|....++..++.||+++|++++|+++++++++++|++..+++
T Consensus 25 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 98 (450)
T 2y4t_A 25 DVEKHLELGKKLLAAGQLADALSQFHAAVDG------DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARL 98 (450)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh------CCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 6888999999999999999999999999988 5567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHH
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNR---IARSTIH 496 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~---eAk~~La 496 (503)
.+|.+|..+|++++|++.|+++++++|.+. .+...+.
T Consensus 99 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~ 138 (450)
T 2y4t_A 99 QRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLI 138 (450)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHH
Confidence 999999999999999999999999999988 6655543
No 84
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.33 E-value=5.5e-12 Score=130.81 Aligned_cols=115 Identities=17% Similarity=0.126 Sum_probs=107.9
Q ss_pred chHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQY-ADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSV 457 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY-~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kA 457 (503)
..+..++.+|.+++..++| ++|+++|++|+++ +|....+|.++|.||+++|++++|+++|+++++++|+ ..+
T Consensus 100 ~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~ 172 (474)
T 4abn_A 100 VEAQALMLKGKALNVTPDYSPEAEVLLSKAVKL------EPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVS 172 (474)
T ss_dssp CCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHH
T ss_pred hhHHHHHHHHHHHHhccccHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHH
Confidence 3688999999999999999 9999999999999 5677899999999999999999999999999999999 799
Q ss_pred HHHHHHHHHHc---------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 458 LVQRALLYESM---------EKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 458 lyrlA~Ay~~L---------GdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
++.+|.+|..+ +++++|++.|+++++++|++..+...+..+..
T Consensus 173 ~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 224 (474)
T 4abn_A 173 LQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYL 224 (474)
T ss_dssp HHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 99999999999 99999999999999999999988888777653
No 85
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.33 E-value=4.1e-12 Score=138.15 Aligned_cols=115 Identities=15% Similarity=0.003 Sum_probs=105.4
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+..+..+|.++++.|+|++|++.|++++++ +|.+..+|+++|.+|+++|++++|+++|+++++++|++..+++
T Consensus 432 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 505 (681)
T 2pzi_A 432 SVELPLMEVRALLDLGDVAKATRKLDDLAER------VGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKL 505 (681)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------HCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHH
T ss_pred chhHHHHHHHHHHhcCCHHHHHHHHHHHhcc------CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHH
Confidence 4678889999999999999999999999998 4567889999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
++|.+|..+|+|++ +++|+++++++|++..+...+..+...
T Consensus 506 ~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~ 546 (681)
T 2pzi_A 506 ALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSA 546 (681)
T ss_dssp HHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 99999999999999 999999999999999988888877544
No 86
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.32 E-value=2.4e-11 Score=118.47 Aligned_cols=110 Identities=16% Similarity=0.113 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 010705 383 AAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRA 462 (503)
Q Consensus 383 alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA 462 (503)
.+..+|.++...+++++|++.|++++++ .|....++.+++.+|.++|++++|++.++++++++|+++.+++.+|
T Consensus 205 ~~~~lg~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 278 (388)
T 1w3b_A 205 AYINLGNVLKEARIFDRAVAAYLRALSL------SPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLA 278 (388)
T ss_dssp HHHHHHHHHHTTTCTTHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhh------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Confidence 3344444444444444444444444443 3344556666666666666666666666666666666666666666
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010705 463 LLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRL 498 (503)
Q Consensus 463 ~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~L 498 (503)
.+|..+|++++|++.|+++++++|.+..+...+..+
T Consensus 279 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 314 (388)
T 1w3b_A 279 NALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANI 314 (388)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHH
Confidence 666666666666666666666666666555555444
No 87
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.32 E-value=2.7e-11 Score=119.27 Aligned_cols=115 Identities=18% Similarity=0.249 Sum_probs=102.0
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Q 010705 385 KNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALL 464 (503)
Q Consensus 385 k~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~A 464 (503)
..+|..+++.+++++|+++|++++++.+. +......++.+++.++.++|++++|++.|+++++++|++..+++.+|.+
T Consensus 261 ~~~~~~~~~~g~~~~A~~~~~~~l~~~p~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 338 (450)
T 2y4t_A 261 IESAEELIRDGRYTDATSKYESVMKTEPS--IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEA 338 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCc--chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 34499999999999999999999988332 1112256899999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 465 YESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 465 y~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
|..++++++|+++|+++++++|++..+...+..++..
T Consensus 339 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 375 (450)
T 2y4t_A 339 YLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRL 375 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHH
Confidence 9999999999999999999999999998888876543
No 88
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.32 E-value=1.3e-11 Score=101.55 Aligned_cols=93 Identities=12% Similarity=0.023 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 010705 399 DAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDL 478 (503)
Q Consensus 399 eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~L 478 (503)
+|++.|++++++ +|.+..++.++|.+|+.+|++++|+++|+++++++|++..+++.+|.+|..+|++++|++.|
T Consensus 3 ~a~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~ 76 (115)
T 2kat_A 3 AITERLEAMLAQ------GTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAW 76 (115)
T ss_dssp CHHHHHHHHHTT------TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHh------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 588999999987 56678899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCC--CHHHHHHHHH
Q 010705 479 RTVLKIDPS--NRIARSTIHR 497 (503)
Q Consensus 479 qkALkLDPe--n~eAk~~La~ 497 (503)
+++++++|. +......+..
T Consensus 77 ~~al~~~~~~~~~~~~~~l~~ 97 (115)
T 2kat_A 77 ESGLAAAQSRGDQQVVKELQV 97 (115)
T ss_dssp HHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHhccccccHHHHHHHHH
Confidence 999999884 3444444433
No 89
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.32 E-value=1.5e-11 Score=122.20 Aligned_cols=103 Identities=31% Similarity=0.380 Sum_probs=97.5
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVL 458 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAl 458 (503)
+.+..++.+|..+++.|+|++|+++|++++++ .| +..+|.+++.||+++|++++|+++|+++++++|++..++
T Consensus 4 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~------~p-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 76 (514)
T 2gw1_A 4 KYALALKDKGNQFFRNKKYDDAIKYYNWALEL------KE-DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVL 76 (514)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH------CC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHH
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHHHHHHhc------Cc-cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHH
Confidence 46789999999999999999999999999998 33 378999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 010705 459 VQRALLYESMEKYKLGAEDLRTVLKIDPSN 488 (503)
Q Consensus 459 yrlA~Ay~~LGdyeeAle~LqkALkLDPen 488 (503)
+.+|.+|..+|++++|+..|+++++++|.+
T Consensus 77 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 106 (514)
T 2gw1_A 77 LRRASANEGLGKFADAMFDLSVLSLNGDFN 106 (514)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhcCCCc
Confidence 999999999999999999999999999865
No 90
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.31 E-value=1.5e-11 Score=118.41 Aligned_cols=112 Identities=17% Similarity=0.077 Sum_probs=94.1
Q ss_pred hHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH--
Q 010705 380 TGAAAKNKGVDNQKA-GQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVS-- 456 (503)
Q Consensus 380 ~A~alk~lGn~~fkq-GDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~k-- 456 (503)
.+.++..+|.++... +++++|+++|++|+++.+...+......++.++|.+|+++|+|++|+++|++++++.|+...
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 195 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQ 195 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTG
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCccc
Confidence 356788999999996 99999999999999998765544445678999999999999999999999999999987543
Q ss_pred -----HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 010705 457 -----VLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIA 491 (503)
Q Consensus 457 -----AlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eA 491 (503)
+++++|.||..+|++++|+.+|+++++++|.....
T Consensus 196 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 196 WSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 67899999999999999999999999999987543
No 91
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.31 E-value=7.9e-12 Score=114.77 Aligned_cols=120 Identities=8% Similarity=0.017 Sum_probs=100.6
Q ss_pred CcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Q 010705 377 AGVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVS 456 (503)
Q Consensus 377 ~~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~k 456 (503)
.......+..+|.+++..++|++|+++|+++++. + .+......+|.++|.|+..+|++++|+++++++++++|.+..
T Consensus 33 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~--~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 109 (272)
T 3u4t_A 33 KYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSK-V--NATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLD 109 (272)
T ss_dssp TCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTT-S--CTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH
T ss_pred CCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-c--CchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHH
Confidence 4455667888999999999999999999999873 2 222334677889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH-HHH
Q 010705 457 VLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIH-RLT 499 (503)
Q Consensus 457 AlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La-~Lq 499 (503)
+++.+|.+|..++++++|++.|+++++++|.+..+...+. .+.
T Consensus 110 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 153 (272)
T 3u4t_A 110 MYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYY 153 (272)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988887777 443
No 92
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.31 E-value=2.8e-12 Score=139.43 Aligned_cols=113 Identities=14% Similarity=-0.001 Sum_probs=106.3
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+.+++.+|.+++..++|++|++.|++|+++ +|.+..+|.++|.||.++|++++ +++|+++++++|++..+++
T Consensus 466 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l------~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~ 538 (681)
T 2pzi_A 466 RWRLVWYRAVAELLTGDYDSATKHFTEVLDT------FPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAF 538 (681)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------STTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHH
Confidence 4678999999999999999999999999999 56678999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
++|.+|..+|++++|+++|+++++++|++.++...+..+.
T Consensus 539 ~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~ 578 (681)
T 2pzi_A 539 GLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTL 578 (681)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHH
Confidence 9999999999999999999999999999988887776663
No 93
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.30 E-value=3.2e-11 Score=106.87 Aligned_cols=118 Identities=14% Similarity=0.061 Sum_probs=85.2
Q ss_pred CcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHcCCCCH
Q 010705 377 AGVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCY-KEVGEYKKAVADCSKVLEQDDTNV 455 (503)
Q Consensus 377 ~~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcy-lrLGdyeeALedaekALkLdPd~~ 455 (503)
......++..+|.++...|++++|++.|++++++ .| +...+..++.+. .+..+..+|++.++++++++|+++
T Consensus 36 ~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~------~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~ 108 (176)
T 2r5s_A 36 LQSRGDVKLAKADCLLETKQFELAQELLATIPLE------YQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNF 108 (176)
T ss_dssp HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGG------GC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCH
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhc------cC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCH
Confidence 3455666777777777777777777777777655 22 223333333332 222333456778888888999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHhh
Q 010705 456 SVLVQRALLYESMEKYKLGAEDLRTVLKIDPSN--RIARSTIHRLTKM 501 (503)
Q Consensus 456 kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen--~eAk~~La~Lqkl 501 (503)
.+++.+|.+|..+|++++|++.|+++++++|+. ..+...+..+...
T Consensus 109 ~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~ 156 (176)
T 2r5s_A 109 ELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSA 156 (176)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHH
Confidence 999999999999999999999999999999975 5577777766543
No 94
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.29 E-value=3.2e-11 Score=112.55 Aligned_cols=113 Identities=16% Similarity=0.092 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 381 GAAAKNKGVDNQKAG-QYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 381 A~alk~lGn~~fkqG-DY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
...+..+|..++..+ ++++|+++|++++++ .+....+|..++.++..++++++|++.+++++++.|....+++
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 163 (330)
T 3hym_B 90 PVSWFAVGCYYLMVGHKNEHARRYLSKATTL------EKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPML 163 (330)
T ss_dssp THHHHHHHHHHHHSCSCHHHHHHHHHHHHTT------CTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh------CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHH
Confidence 445666666666666 667777777776655 3344566666777777777777777777777777776666677
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
.+|.+|..++++++|++.|+++++++|++..+...+..+.
T Consensus 164 ~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 203 (330)
T 3hym_B 164 YIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVA 203 (330)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 7777777777777777777777777777666655555443
No 95
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.29 E-value=1.1e-11 Score=124.76 Aligned_cols=108 Identities=24% Similarity=0.311 Sum_probs=93.9
Q ss_pred CCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Q 010705 376 PAGVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNV 455 (503)
Q Consensus 376 ~~~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~ 455 (503)
.....+..++.+|..+++.|+|++|+++|++++++ +|....+|.++|.||+++|++++|++.|+++++++|++.
T Consensus 20 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 93 (537)
T 3fp2_A 20 QRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIEL------DPNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHS 93 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred hhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh------CCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchH
Confidence 33446889999999999999999999999999998 566789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 010705 456 SVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRI 490 (503)
Q Consensus 456 kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~e 490 (503)
.+++.+|.+|..+|++++|++.|+ ++.++|+...
T Consensus 94 ~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~~~~ 127 (537)
T 3fp2_A 94 KALLRRASANESLGNFTDAMFDLS-VLSLNGDFDG 127 (537)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHH-HHC-------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCCCCh
Confidence 999999999999999999999995 8888887644
No 96
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.29 E-value=5.8e-11 Score=113.46 Aligned_cols=81 Identities=15% Similarity=0.119 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 420 MMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 420 ~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
...++.+++.+|.+.|++++|++.|+++++++|++..+++.+|.+|..+|++++|++.|+++++++|++..+...+..+.
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 295 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISC 295 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 45667777777777777777777777777777777777777777777777777777777777777777777766666554
Q ss_pred h
Q 010705 500 K 500 (503)
Q Consensus 500 k 500 (503)
.
T Consensus 296 ~ 296 (368)
T 1fch_A 296 I 296 (368)
T ss_dssp H
T ss_pred H
Confidence 3
No 97
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.28 E-value=4.5e-11 Score=98.93 Aligned_cols=108 Identities=16% Similarity=0.128 Sum_probs=96.2
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC------
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDT------ 453 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd------ 453 (503)
.+..+..+|.+++..+++++|+++|++++++.++..+......++.++|.++..++++++|++++++++++.+.
T Consensus 48 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 127 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIG 127 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHh
Confidence 45688899999999999999999999999998877666667889999999999999999999999999987422
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 010705 454 NVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPS 487 (503)
Q Consensus 454 ~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPe 487 (503)
...+++.+|.+|..+|++++|++.|++++++..+
T Consensus 128 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 128 EGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 2568889999999999999999999999988654
No 98
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.28 E-value=1.1e-11 Score=108.88 Aligned_cols=96 Identities=11% Similarity=0.013 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 010705 400 AIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLR 479 (503)
Q Consensus 400 AIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~Lq 479 (503)
+-+.|++++++ +|....+++++|.++++.|+|++|+..|+++++++|.++.+++.+|.+|..+|++++|+++|+
T Consensus 6 ~~~~~~~al~~------~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 79 (148)
T 2vgx_A 6 GGGTIAMLNEI------SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYS 79 (148)
T ss_dssp CCCSHHHHTTC------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hhhhHHHHHcC------CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34567788776 677889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHhh
Q 010705 480 TVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 480 kALkLDPen~eAk~~La~Lqkl 501 (503)
++++++|++..+...+..+...
T Consensus 80 ~al~l~p~~~~~~~~lg~~~~~ 101 (148)
T 2vgx_A 80 YGAVMDIXEPRFPFHAAECLLQ 101 (148)
T ss_dssp HHHHHSTTCTHHHHHHHHHHHH
T ss_pred HHHhcCCCCchHHHHHHHHHHH
Confidence 9999999999988888777544
No 99
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.27 E-value=1.2e-11 Score=108.41 Aligned_cols=105 Identities=11% Similarity=0.056 Sum_probs=92.2
Q ss_pred HHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH-HHHcC
Q 010705 391 NQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALL-YESME 469 (503)
Q Consensus 391 ~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~A-y~~LG 469 (503)
++..++|++|+++|++++++ .|....+|..+|.+|+..+++++|++.|+++++++|++..+++.+|.+ |+..+
T Consensus 20 ~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~ 93 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRA------NPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQAS 93 (177)
T ss_dssp CC-----CCCCHHHHHHHHH------CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTT
T ss_pred hhhccCHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcC
Confidence 45788999999999999988 566788999999999999999999999999999999999999999999 88999
Q ss_pred CH--HHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 470 KY--KLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 470 dy--eeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
++ ++|++.|+++++++|.+..+...+..+...
T Consensus 94 ~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 127 (177)
T 2e2e_A 94 QHMTAQTRAMIDKALALDSNEITALMLLASDAFM 127 (177)
T ss_dssp TCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 99 999999999999999999988888776543
No 100
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.26 E-value=8.9e-11 Score=90.86 Aligned_cols=83 Identities=22% Similarity=0.311 Sum_probs=66.8
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010705 419 TMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRL 498 (503)
Q Consensus 419 d~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~L 498 (503)
....++.++|.++++.+++++|++.++++++++|++..+++.+|.+|..++++++|++.|+++++++|++..+...+..+
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 86 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 45677788888888888888888888888888888888888888888888888888888888888888888877777776
Q ss_pred Hhh
Q 010705 499 TKM 501 (503)
Q Consensus 499 qkl 501 (503)
...
T Consensus 87 ~~~ 89 (91)
T 1na3_A 87 KQK 89 (91)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
No 101
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.25 E-value=1.1e-10 Score=107.56 Aligned_cols=118 Identities=12% Similarity=0.029 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHH------------------cCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKE------------------VGEYKKAV 441 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylr------------------LGdyeeAL 441 (503)
...+++.+|.++++.++|++|++.|++++++.|+ .+....+++.+|.|+++ ++++++|+
T Consensus 40 ~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~---~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~ 116 (225)
T 2yhc_A 40 SQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT---HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAF 116 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC---CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHH
Confidence 3568899999999999999999999999988443 33445688899999987 57899999
Q ss_pred HHHHHHHHcCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH---HHHHHHHHHh
Q 010705 442 ADCSKVLEQDDTNVSVL-----------------VQRALLYESMEKYKLGAEDLRTVLKIDPSNRI---ARSTIHRLTK 500 (503)
Q Consensus 442 edaekALkLdPd~~kAl-----------------yrlA~Ay~~LGdyeeAle~LqkALkLDPen~e---Ak~~La~Lqk 500 (503)
..|+++++++|++..+. +.+|.+|+..|++++|+..|+++++++|++.. +...+..+..
T Consensus 117 ~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~ 195 (225)
T 2yhc_A 117 SDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYR 195 (225)
T ss_dssp HHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHH
Confidence 99999999999986543 67899999999999999999999999999864 4444444433
No 102
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.25 E-value=5e-11 Score=114.01 Aligned_cols=106 Identities=11% Similarity=0.005 Sum_probs=95.0
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc-CCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC----
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKS-GDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN---- 454 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~-~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~---- 454 (503)
.+.++..+|.+|+..++|++|+++|++|+++..+. .+.+..+.+|.++|.+|.++++|++|++++++++++.+..
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~ 233 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHH
Confidence 46679999999999999999999999999988776 4556777899999999999999999999999999886433
Q ss_pred --HHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhC
Q 010705 455 --VSVLVQRALLYESME-KYKLGAEDLRTVLKID 485 (503)
Q Consensus 455 --~kAlyrlA~Ay~~LG-dyeeAle~LqkALkLD 485 (503)
..+++++|.+|..+| ++++|+++|++++++.
T Consensus 234 ~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp THHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 789999999999999 4799999999999874
No 103
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.25 E-value=7.9e-11 Score=106.81 Aligned_cols=108 Identities=19% Similarity=0.129 Sum_probs=98.2
Q ss_pred cchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----
Q 010705 378 GVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKS--GDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ----- 450 (503)
Q Consensus 378 ~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~--~ddpd~A~aysNrAlcylrLGdyeeALedaekALkL----- 450 (503)
...+.++..+|.+++..+++++|+++|++++++..+. .+.+....++.++|.+|+.+|++++|++++++++++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 161 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRL 161 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Confidence 3467889999999999999999999999999987653 335778999999999999999999999999999998
Q ss_pred ---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 010705 451 ---DDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKID 485 (503)
Q Consensus 451 ---dPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLD 485 (503)
+|....+++.+|.+|..+|++++|++.|++++++.
T Consensus 162 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~ 199 (283)
T 3edt_B 162 GPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRA 199 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 67778899999999999999999999999999983
No 104
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.24 E-value=9.2e-11 Score=115.63 Aligned_cols=109 Identities=16% Similarity=0.028 Sum_probs=101.3
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----cCCC
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLE-----QDDT 453 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALk-----LdPd 453 (503)
..+.++..+|.++...++|++|+++|++|+++.++.++....+.++.++|.||..+|++++|+++++++++ .+|.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 259 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL 259 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh
Confidence 36788999999999999999999999999999888777777888999999999999999999999999999 7788
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 010705 454 NVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPS 487 (503)
Q Consensus 454 ~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPe 487 (503)
...+++.+|.+|..+|++++|++.|++++++.+.
T Consensus 260 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 260 LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999654
No 105
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.24 E-value=8.3e-11 Score=115.64 Aligned_cols=108 Identities=13% Similarity=0.053 Sum_probs=100.3
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----cC-C
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLE-----QD-D 452 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALk-----Ld-P 452 (503)
..+.++..+|.++...|+|++|+++|++|+++.++..+.+..+.++.++|.||..+|++++|+++++++++ .+ |
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~ 261 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILP 261 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGG
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccch
Confidence 45778999999999999999999999999999988877778888999999999999999999999999999 45 7
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 010705 453 TNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDP 486 (503)
Q Consensus 453 d~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDP 486 (503)
....+++.+|.+|..+|++++|+++|++++++.+
T Consensus 262 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 262 SLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 7789999999999999999999999999999854
No 106
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.23 E-value=1.1e-10 Score=116.00 Aligned_cols=119 Identities=12% Similarity=0.019 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHH---cCCHHHHHHHHHHHHHcCCCCHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKE---VGEYKKAVADCSKVLEQDDTNVSV 457 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylr---LGdyeeALedaekALkLdPd~~kA 457 (503)
...+..+|.++++.+++++|+++|++++++.+..........++.+++.++++ +|++++|++.++++++++|++..+
T Consensus 372 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 451 (514)
T 2gw1_A 372 PEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQA 451 (514)
T ss_dssp SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHH
Confidence 45788899999999999999999999999876544333335589999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 458 LVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 458 lyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
++.+|.+|..+|++++|++.|+++++++|++.++...+..++
T Consensus 452 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 493 (514)
T 2gw1_A 452 KIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAE 493 (514)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 999999999999999999999999999999988877665443
No 107
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.23 E-value=3.7e-11 Score=103.17 Aligned_cols=94 Identities=11% Similarity=-0.019 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 010705 402 KWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTV 481 (503)
Q Consensus 402 k~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkA 481 (503)
..|++++++ +|.....++++|.++++.|++++|++.|+++++++|++..+++.+|.+|..+++|++|+.+|+++
T Consensus 5 ~~l~~al~~------~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 78 (142)
T 2xcb_A 5 GTLAMLRGL------SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYG 78 (142)
T ss_dssp ----CCTTC------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHcC------CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 455666655 67788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHhh
Q 010705 482 LKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 482 LkLDPen~eAk~~La~Lqkl 501 (503)
++++|++..+...+..+...
T Consensus 79 l~~~p~~~~~~~~lg~~~~~ 98 (142)
T 2xcb_A 79 ALMDINEPRFPFHAAECHLQ 98 (142)
T ss_dssp HHHCTTCTHHHHHHHHHHHH
T ss_pred HhcCCCCcHHHHHHHHHHHH
Confidence 99999999988888777544
No 108
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.23 E-value=7.2e-11 Score=107.91 Aligned_cols=107 Identities=15% Similarity=0.092 Sum_probs=95.5
Q ss_pred HhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHH
Q 010705 393 KAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYK 472 (503)
Q Consensus 393 kqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdye 472 (503)
..++|++|++.|+++++.. ....+....++..+|.+++.+|++++|++.|+++++++|.+..+++.+|.+|..+++++
T Consensus 17 ~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~ 94 (275)
T 1xnf_A 17 PTLQQEVILARMEQILASR--ALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFD 94 (275)
T ss_dssp CCHHHHHHHHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHH
T ss_pred ccchHHHHHHHHHHHHhcc--cccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHH
Confidence 3478999999999999752 12245778999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 473 LGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 473 eAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
+|+++|+++++++|++..+...+..+...
T Consensus 95 ~A~~~~~~al~~~~~~~~~~~~la~~~~~ 123 (275)
T 1xnf_A 95 AAYEAFDSVLELDPTYNYAHLNRGIALYY 123 (275)
T ss_dssp HHHHHHHHHHHHCTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCccccHHHHHHHHHHHH
Confidence 99999999999999998888887776543
No 109
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.23 E-value=7.6e-11 Score=109.84 Aligned_cols=109 Identities=14% Similarity=0.033 Sum_probs=98.7
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
....++.+|..++..++|++|+++|+++++. .+....++..++.++.+++++++|++.++++++++|.+..+++
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 93 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQA------APEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHA 93 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHH
Confidence 3456889999999999999999999999988 5567889999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARST 494 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~ 494 (503)
.+|.+|..++++++|++.|+++++++|.+..+...
T Consensus 94 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 128 (327)
T 3cv0_A 94 ALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSV 128 (327)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC---
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHH
Confidence 99999999999999999999999999987554433
No 110
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.22 E-value=1.6e-10 Score=89.43 Aligned_cols=84 Identities=24% Similarity=0.263 Sum_probs=78.2
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+..+..+|..++..++|++|+++|++++++ .+....++.++|.|+++++++++|+++++++++++|.+..+++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 81 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQ 81 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHH
Confidence 5678899999999999999999999999998 4566789999999999999999999999999999999999999
Q ss_pred HHHHHHHHcC
Q 010705 460 QRALLYESME 469 (503)
Q Consensus 460 rlA~Ay~~LG 469 (503)
.++.++..+|
T Consensus 82 ~l~~~~~~~g 91 (91)
T 1na3_A 82 NLGNAKQKQG 91 (91)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
Confidence 9999998764
No 111
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.22 E-value=7.9e-11 Score=108.93 Aligned_cols=122 Identities=23% Similarity=0.267 Sum_probs=105.5
Q ss_pred cchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC----
Q 010705 378 GVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKS--GDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQD---- 451 (503)
Q Consensus 378 ~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~--~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLd---- 451 (503)
...+..+..+|.+++..+++++|+++|++++++..+. .+.+....++.+++.+|..+|++++|++.+++++++.
T Consensus 66 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (311)
T 3nf1_A 66 PDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVL 145 (311)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhc
Confidence 3467889999999999999999999999999987664 5567888999999999999999999999999999884
Q ss_pred ----CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHH
Q 010705 452 ----DTNVSVLVQRALLYESMEKYKLGAEDLRTVLKI--------DPSNRIARSTIHRLT 499 (503)
Q Consensus 452 ----Pd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkL--------DPen~eAk~~La~Lq 499 (503)
+....+++.+|.+|..++++++|++.|++++++ .|....+...+..+.
T Consensus 146 ~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~ 205 (311)
T 3nf1_A 146 GKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCY 205 (311)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 556778999999999999999999999999998 555555555555543
No 112
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.22 E-value=7.2e-11 Score=123.42 Aligned_cols=104 Identities=11% Similarity=0.001 Sum_probs=99.1
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
....+..+|.+++..+++++|+++|++++++ ++....++.++|.||.++|++++|++.|+++++++|++..+++
T Consensus 56 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 129 (568)
T 2vsy_A 56 HPEAVARLGRVRWTQQRHAEAAVLLQQASDA------APEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITA 129 (568)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 4788999999999999999999999999998 5667889999999999999999999999999999999999999
Q ss_pred HHHHHHHHc---CCHHHHHHHHHHHHHhCCCCH
Q 010705 460 QRALLYESM---EKYKLGAEDLRTVLKIDPSNR 489 (503)
Q Consensus 460 rlA~Ay~~L---GdyeeAle~LqkALkLDPen~ 489 (503)
.++.+|..+ +++++|++.|+++++++|.+.
T Consensus 130 ~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 162 (568)
T 2vsy_A 130 QLLNWRRRLCDWRALDVLSAQVRAAVAQGVGAV 162 (568)
T ss_dssp HHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCCS
T ss_pred HHHHHHHHhhccccHHHHHHHHHHHHhcCCccc
Confidence 999999999 999999999999999999863
No 113
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.22 E-value=1.4e-10 Score=101.79 Aligned_cols=107 Identities=12% Similarity=-0.004 Sum_probs=93.2
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc---CCC--
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ---DDT-- 453 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkL---dPd-- 453 (503)
..+..+..+|..++..++|++|+++|++++++..+.++.+..+.++.++|.+|..+|++++|++++++++++ .++
T Consensus 24 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 103 (203)
T 3gw4_A 24 TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDP 103 (203)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccH
Confidence 367888999999999999999999999999988877777788889999999999999999999999999988 332
Q ss_pred --CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 010705 454 --NVSVLVQRALLYESMEKYKLGAEDLRTVLKID 485 (503)
Q Consensus 454 --~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLD 485 (503)
...+++.+|.+|..+|++++|++.|++++++.
T Consensus 104 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 104 LAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 35578889999999999999999999998774
No 114
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.21 E-value=1.4e-10 Score=107.31 Aligned_cols=107 Identities=23% Similarity=0.258 Sum_probs=97.5
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcC--CChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc------
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSG--DMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ------ 450 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~--ddpd~A~aysNrAlcylrLGdyeeALedaekALkL------ 450 (503)
..+..+..+|..++..++|++|+++|++++++..+.. +.+....++..++.+|..+|++++|++++++++++
T Consensus 25 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 104 (311)
T 3nf1_A 25 ARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLG 104 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 4688999999999999999999999999999876643 56788899999999999999999999999999988
Q ss_pred --CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 010705 451 --DDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKID 485 (503)
Q Consensus 451 --dPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLD 485 (503)
.+....+++.+|.+|..++++++|++.|++++++.
T Consensus 105 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 141 (311)
T 3nf1_A 105 KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIR 141 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 35567899999999999999999999999999985
No 115
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.21 E-value=2.5e-10 Score=111.04 Aligned_cols=109 Identities=12% Similarity=-0.032 Sum_probs=60.3
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHH----HcCCHHHHHHHHHHHHHcCCCCH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYK----EVGEYKKAVADCSKVLEQDDTNV 455 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcyl----rLGdyeeALedaekALkLdPd~~ 455 (503)
...++..+|.++.+.|++++|++.|++++++.+ +.. +.+++.+|. ..+++++|+..|+++++++|+++
T Consensus 129 ~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p------~~~--~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~ 200 (291)
T 3mkr_A 129 SLECMAMTVQILLKLDRLDLARKELKKMQDQDE------DAT--LTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTL 200 (291)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCH--HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCc------CcH--HHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcH
Confidence 466788888899999999999999888887632 111 111221111 12445555555555555555555
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010705 456 SVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIH 496 (503)
Q Consensus 456 kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La 496 (503)
.+++.+|.+|+.+|++++|++.|+++++++|++.++...+.
T Consensus 201 ~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~ 241 (291)
T 3mkr_A 201 LLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLV 241 (291)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 55555555555555555555555555555555544444333
No 116
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.21 E-value=1.2e-10 Score=114.39 Aligned_cols=121 Identities=12% Similarity=0.095 Sum_probs=105.1
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC-ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC---
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGD-MATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN--- 454 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~d-dpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~--- 454 (503)
..+.++..+|.+++..+++++|+++|++|+++.++..+ .+..+.++.++|.||..+|++++|++++++++++.+..
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 220 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQP 220 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCCh
Confidence 46788999999999999999999999999999888765 56778899999999999999999999999999885432
Q ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----C-CCCHHHHHHHHHHH
Q 010705 455 ---VSVLVQRALLYESMEKYKLGAEDLRTVLKI-----D-PSNRIARSTIHRLT 499 (503)
Q Consensus 455 ---~kAlyrlA~Ay~~LGdyeeAle~LqkALkL-----D-Pen~eAk~~La~Lq 499 (503)
..+++++|.+|..+|++++|+++|++++++ + |....+...+..+.
T Consensus 221 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~ 274 (383)
T 3ulq_A 221 QLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIH 274 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHH
Confidence 358999999999999999999999999994 5 55556666665554
No 117
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.21 E-value=1.8e-10 Score=95.66 Aligned_cols=83 Identities=12% Similarity=0.107 Sum_probs=77.6
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010705 419 TMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRL 498 (503)
Q Consensus 419 d~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~L 498 (503)
..+..|.++|.++++.|+|++|++.|+++++++|++..+++.+|.+|..++++++|+++|+++++++|++..+...+..+
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999988888777
Q ss_pred Hhh
Q 010705 499 TKM 501 (503)
Q Consensus 499 qkl 501 (503)
...
T Consensus 82 ~~~ 84 (126)
T 3upv_A 82 QIA 84 (126)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 118
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.20 E-value=2.8e-11 Score=96.45 Aligned_cols=90 Identities=9% Similarity=0.068 Sum_probs=76.9
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 010705 385 KNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMME-VLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRAL 463 (503)
Q Consensus 385 k~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~-aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~ 463 (503)
+.+|..+++.++|++|++.|++++++ .|.... ++.++|.||+.++++++|+++|+++++++|++..++++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--- 74 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQT------EPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--- 74 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH------CSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH---
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH------CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH---
Confidence 56788899999999999999999988 556677 89999999999999999999999999999998888755
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCC
Q 010705 464 LYESMEKYKLGAEDLRTVLKIDPSN 488 (503)
Q Consensus 464 Ay~~LGdyeeAle~LqkALkLDPen 488 (503)
+.+.+++..|+++++++|++
T Consensus 75 -----~~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 75 -----KMVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp -----HHHHHHHHHHCCTTHHHHCC
T ss_pred -----HHHHHHHHHHHHHhccCccc
Confidence 56778888888888887765
No 119
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.20 E-value=1.4e-10 Score=92.62 Aligned_cols=81 Identities=11% Similarity=0.133 Sum_probs=74.3
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHH
Q 010705 420 MMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSN------RIARS 493 (503)
Q Consensus 420 ~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen------~eAk~ 493 (503)
.+.++.++|.++++.|+|++|++.|+++++++|.+..+++++|.+|..+|++++|+++|+++++++|++ ..+..
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999999999998 66666
Q ss_pred HHHHHHh
Q 010705 494 TIHRLTK 500 (503)
Q Consensus 494 ~La~Lqk 500 (503)
.+..+..
T Consensus 83 ~~~~~~~ 89 (111)
T 2l6j_A 83 RLELAQG 89 (111)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666544
No 120
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.20 E-value=1.5e-10 Score=110.64 Aligned_cols=106 Identities=12% Similarity=0.026 Sum_probs=91.6
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-----
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMM-EVLSTRASCYKEVGEYKKAVADCSKVLEQDDT----- 453 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A-~aysNrAlcylrLGdyeeALedaekALkLdPd----- 453 (503)
.+.++..+|.+|+..++|++|+++|++|+++.+..++..... .++.++|.+|.++|+|++|++++++++++.+.
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~ 233 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHH
Confidence 467889999999999999999999999998877665444333 79999999999999999999999999988632
Q ss_pred -CHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHhC
Q 010705 454 -NVSVLVQRALLYESMEKYKLG-AEDLRTVLKID 485 (503)
Q Consensus 454 -~~kAlyrlA~Ay~~LGdyeeA-le~LqkALkLD 485 (503)
...+++++|.+|..+|++++| ..+|++++.+.
T Consensus 234 ~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp SHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 277899999999999999999 77799998775
No 121
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.20 E-value=2.6e-10 Score=110.88 Aligned_cols=103 Identities=14% Similarity=0.128 Sum_probs=91.6
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHc
Q 010705 389 VDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESM 468 (503)
Q Consensus 389 n~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~L 468 (503)
..+...+++++|+++|+++++. .|....+|.++|.|++++|++++|++.++++++++|+++.++++++.++..+
T Consensus 174 ~l~~~~~~~~eA~~~~~~~l~~------~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~ 247 (291)
T 3mkr_A 174 SLAAGGEKLQDAYYIFQEMADK------CSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHL 247 (291)
T ss_dssp HHHHCTTHHHHHHHHHHHHHHH------SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHhCchHHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 3334458999999999999988 5567889999999999999999999999999999999999999999999999
Q ss_pred CCHHH-HHHHHHHHHHhCCCCHHHHHHHHH
Q 010705 469 EKYKL-GAEDLRTVLKIDPSNRIARSTIHR 497 (503)
Q Consensus 469 Gdyee-Ale~LqkALkLDPen~eAk~~La~ 497 (503)
|++++ +.++++++++++|+++.+......
T Consensus 248 g~~~eaa~~~~~~~~~~~P~~~~~~d~~~~ 277 (291)
T 3mkr_A 248 GKPPEVTNRYLSQLKDAHRSHPFIKEYRAK 277 (291)
T ss_dssp TCCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 99987 568889999999999887665443
No 122
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.19 E-value=2.5e-10 Score=96.72 Aligned_cols=99 Identities=11% Similarity=0.111 Sum_probs=89.2
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
....+..+|.+++..++|++|+++|++++++ .+....++.++|.|+.++|++++|+++++++++++|.+..++.
T Consensus 46 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 119 (166)
T 1a17_A 46 NAIYYGNRSLAYLRTECYGYALGDATRAIEL------DKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKM 119 (166)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHH
Confidence 4778999999999999999999999999998 5566889999999999999999999999999999999998885
Q ss_pred HH--HHHHHHcCCHHHHHHHHHHHHHh
Q 010705 460 QR--ALLYESMEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 460 rl--A~Ay~~LGdyeeAle~LqkALkL 484 (503)
.+ +.++..++++++|++.++++..+
T Consensus 120 ~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 120 KYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 54 55588899999999999987665
No 123
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.19 E-value=1.8e-10 Score=100.39 Aligned_cols=87 Identities=21% Similarity=0.170 Sum_probs=81.0
Q ss_pred CChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010705 416 DMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTI 495 (503)
Q Consensus 416 ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~L 495 (503)
+++..+..|..+|.++++.++|++|++.|+++++++|++..+++.+|.+|+.+++|++|+++|+++++++|++..+...+
T Consensus 6 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 85 (164)
T 3sz7_A 6 APTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRL 85 (164)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 35667899999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHhhh
Q 010705 496 HRLTKMV 502 (503)
Q Consensus 496 a~LqklL 502 (503)
..+...+
T Consensus 86 g~~~~~~ 92 (164)
T 3sz7_A 86 GLARFDM 92 (164)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 8776543
No 124
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.19 E-value=1.4e-10 Score=116.55 Aligned_cols=80 Identities=18% Similarity=0.117 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010705 419 TMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRL 498 (503)
Q Consensus 419 d~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~L 498 (503)
....++..++.++..++++++|++.++++++++|++..+++.+|.+|..+|++++|++.|+++++++|++..+...+..+
T Consensus 308 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 387 (537)
T 3fp2_A 308 EYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEI 387 (537)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 34455566666666666666666666666666666666666666666666666666666666666666655555555444
No 125
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.17 E-value=1.9e-10 Score=114.18 Aligned_cols=98 Identities=20% Similarity=0.128 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQ 460 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyr 460 (503)
+.++.++|.++++.++|++|+++|++||++ +|....+|+++|.||+.++++++|+++|+++++++|++..+++.
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~ 269 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALEL------DSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQ 269 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 678999999999999999999999999999 56778999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHH-HHHHHHHHHh
Q 010705 461 RALLYESMEKYKLG-AEDLRTVLKI 484 (503)
Q Consensus 461 lA~Ay~~LGdyeeA-le~LqkALkL 484 (503)
++.++..++++++| ...|++++..
T Consensus 270 l~~~~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 270 LAVCQQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 5567777654
No 126
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.17 E-value=9.7e-11 Score=113.45 Aligned_cols=105 Identities=12% Similarity=0.095 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC------H
Q 010705 382 AAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN------V 455 (503)
Q Consensus 382 ~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~------~ 455 (503)
.++..+|.+|.. ++|++|+++|++|+++.+...+......++.++|.+|.++|+|++|+++|++++++.+.. .
T Consensus 117 ~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 195 (307)
T 2ifu_A 117 MALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCY 195 (307)
T ss_dssp HHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHH
Confidence 344455555554 555555555555555544433323334455555555555555555555555555543321 2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 010705 456 SVLVQRALLYESMEKYKLGAEDLRTVLKIDPSN 488 (503)
Q Consensus 456 kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen 488 (503)
.+++.++.++..+|++++|+.+|++++ ++|..
T Consensus 196 ~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 196 KKCIAQVLVQLHRADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC
Confidence 244445555555555555555555555 55555
No 127
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.17 E-value=2.4e-10 Score=109.76 Aligned_cols=110 Identities=19% Similarity=0.185 Sum_probs=94.8
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC----
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN---- 454 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~---- 454 (503)
..+..+..+|.+++..++|++|+++|++++++.++..+....+.++.++|.+|+.+|++++|++++++++++.+..
T Consensus 185 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 264 (406)
T 3sf4_A 185 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 264 (406)
T ss_dssp HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCch
Confidence 3566788899999999999999999999999988877666777789999999999999999999999999887655
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 010705 455 --VSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSN 488 (503)
Q Consensus 455 --~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen 488 (503)
..+++.+|.+|..+|++++|++.|++++++.+..
T Consensus 265 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 300 (406)
T 3sf4_A 265 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 300 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc
Confidence 6788899999999999999999999999886543
No 128
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.17 E-value=2.7e-10 Score=110.33 Aligned_cols=110 Identities=13% Similarity=0.120 Sum_probs=100.8
Q ss_pred cchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC---
Q 010705 378 GVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN--- 454 (503)
Q Consensus 378 ~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~--- 454 (503)
...+..+..+|.+|.+.++|++|+++|++|+++.++.++....+.++.++|.+|.. +++++|+++|++++++.+..
T Consensus 73 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~ 151 (307)
T 2ifu_A 73 FHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERL 151 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCCh
Confidence 35789999999999999999999999999999998877666778999999999998 99999999999999997643
Q ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 010705 455 ---VSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSN 488 (503)
Q Consensus 455 ---~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen 488 (503)
..+++++|.+|..+|+|++|+++|++++++.+++
T Consensus 152 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 152 RQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 6789999999999999999999999999997654
No 129
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.16 E-value=7.9e-11 Score=100.61 Aligned_cols=71 Identities=14% Similarity=0.191 Sum_probs=67.6
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 010705 419 TMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNR 489 (503)
Q Consensus 419 d~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~ 489 (503)
+.+.++.++|.++++.|+|++|+++|+++|+++|+++.+|+++|.+|+.+++|++|+++|+++++++|++.
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~ 76 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR 76 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc
Confidence 45778999999999999999999999999999999999999999999999999999999999999998764
No 130
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.15 E-value=1.8e-10 Score=94.16 Aligned_cols=82 Identities=12% Similarity=0.067 Sum_probs=71.1
Q ss_pred ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHH
Q 010705 417 MATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPS--NRIARST 494 (503)
Q Consensus 417 dpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPe--n~eAk~~ 494 (503)
+|.+..+++++|.+|+++|++++|+++|+++++++|++..+++.+|.+|..+|++++|++.|++++++.|. +......
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~ 82 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSE 82 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHH
Confidence 46678899999999999999999999999999999999999999999999999999999999999999874 3444444
Q ss_pred HHHH
Q 010705 495 IHRL 498 (503)
Q Consensus 495 La~L 498 (503)
+..+
T Consensus 83 l~~~ 86 (100)
T 3ma5_A 83 LQDA 86 (100)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 131
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.15 E-value=7.2e-10 Score=113.52 Aligned_cols=114 Identities=9% Similarity=0.032 Sum_probs=99.4
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
....+..++..|++.|++++|+++|++++++ .+.+..+|..++.+|.+.|++++|++.|++++++.|++..+++
T Consensus 372 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 445 (597)
T 2xpi_A 372 KAVTWLAVGIYYLCVNKISEARRYFSKSSTM------DPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYL 445 (597)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHH
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHH
Confidence 3667788899999999999999999999887 4566788999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
.++.+|..+|++++|++.|+++++++|.+..+...+..+.
T Consensus 446 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 485 (597)
T 2xpi_A 446 FLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVA 485 (597)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 9999999999999999999999999999888777666554
No 132
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.14 E-value=3.4e-10 Score=108.74 Aligned_cols=120 Identities=17% Similarity=0.124 Sum_probs=102.8
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-----
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN----- 454 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~----- 454 (503)
.+..+..+|.+++..+++++|+++|++++++.++..+......++.++|.+|..+|++++|++++++++++.+..
T Consensus 226 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 305 (406)
T 3sf4_A 226 ERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIG 305 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHH
Confidence 456889999999999999999999999999988877666678899999999999999999999999999986443
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHH
Q 010705 455 -VSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSN------RIARSTIHRLT 499 (503)
Q Consensus 455 -~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen------~eAk~~La~Lq 499 (503)
..+++.+|.+|..+|++++|+++|++++++.+.. ..+...+.++.
T Consensus 306 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~ 357 (406)
T 3sf4_A 306 EGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGELTARLNLSDLQ 357 (406)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHH
Confidence 6789999999999999999999999999985433 34444444443
No 133
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.14 E-value=3.8e-10 Score=103.98 Aligned_cols=108 Identities=19% Similarity=0.198 Sum_probs=97.2
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-----
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN----- 454 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~----- 454 (503)
.+..+..+|.+++..+++++|+++|++++++.++..+......++.+++.++..+|++++|++.+++++++.+..
T Consensus 182 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 261 (338)
T 3ro2_A 182 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAV 261 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhH
Confidence 466788999999999999999999999999988776666777899999999999999999999999999887654
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 010705 455 -VSVLVQRALLYESMEKYKLGAEDLRTVLKIDPS 487 (503)
Q Consensus 455 -~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPe 487 (503)
..+++.+|.+|..+|++++|++.|++++++.+.
T Consensus 262 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 295 (338)
T 3ro2_A 262 EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 295 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 778999999999999999999999999998653
No 134
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.12 E-value=6e-10 Score=110.96 Aligned_cols=118 Identities=14% Similarity=0.097 Sum_probs=102.1
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC--ChhhHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHcCCCCH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGD--MATMMEVLSTRASCYKEVG--EYKKAVADCSKVLEQDDTNV 455 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~d--dpd~A~aysNrAlcylrLG--dyeeALedaekALkLdPd~~ 455 (503)
.+..+.++|.+|+..|+|++|+++|++++++.++... ....+.++.+++.+++.++ +|++|+++|+++++++|+++
T Consensus 93 ~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~ 172 (472)
T 4g1t_A 93 SLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNP 172 (472)
T ss_dssp THHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCH
Confidence 5677889999999999999999999999999876433 3456789999998887765 69999999999999999999
Q ss_pred HHHHHHHHHHHH---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 010705 456 SVLVQRALLYES---MEKYKLGAEDLRTVLKIDPSNRIARSTIHR 497 (503)
Q Consensus 456 kAlyrlA~Ay~~---LGdyeeAle~LqkALkLDPen~eAk~~La~ 497 (503)
.+++.++.++.. .+++++|++.|+++++++|++..+...+..
T Consensus 173 ~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~ 217 (472)
T 4g1t_A 173 EFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLAL 217 (472)
T ss_dssp HHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHH
Confidence 999999988654 577889999999999999999887766653
No 135
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.12 E-value=8.4e-10 Score=96.81 Aligned_cols=108 Identities=13% Similarity=0.040 Sum_probs=94.9
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCCh-hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC--CC-
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMA-TMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDD--TN- 454 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddp-d~A~aysNrAlcylrLGdyeeALedaekALkLdP--d~- 454 (503)
..+.++..+|.++...|++++|+++|++++++.++.++++ ....++.++|.++..+|++++|++++++++++.+ .+
T Consensus 64 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 143 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQ 143 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccch
Confidence 4677899999999999999999999999999988777444 6788899999999999999999999999997642 22
Q ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 010705 455 ---VSVLVQRALLYESMEKYKLGAEDLRTVLKIDP 486 (503)
Q Consensus 455 ---~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDP 486 (503)
..+++.+|.+|..+|++++|+++|++++++..
T Consensus 144 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 144 VAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 34578899999999999999999999999854
No 136
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.12 E-value=4.3e-10 Score=110.82 Aligned_cols=123 Identities=12% Similarity=0.007 Sum_probs=105.1
Q ss_pred cchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC-ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC----
Q 010705 378 GVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGD-MATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDD---- 452 (503)
Q Consensus 378 ~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~d-dpd~A~aysNrAlcylrLGdyeeALedaekALkLdP---- 452 (503)
...+..+..+|.+++..+++.+|+++|++|+++.++..+ ....+.++.++|.||..+|++++|++++++++++.+
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~ 217 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN 217 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC
Confidence 346888999999999999999999999999999887654 446788999999999999999999999999998743
Q ss_pred --CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHh
Q 010705 453 --TNVSVLVQRALLYESMEKYKLGAEDLRTVLK-----IDPSNRIARSTIHRLTK 500 (503)
Q Consensus 453 --d~~kAlyrlA~Ay~~LGdyeeAle~LqkALk-----LDPen~eAk~~La~Lqk 500 (503)
....+++++|.+|..++++++|+++|+++++ .+|....+...+..+..
T Consensus 218 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~ 272 (378)
T 3q15_A 218 DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLC 272 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHH
Confidence 1256899999999999999999999999999 66666666666665543
No 137
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.12 E-value=2.6e-10 Score=111.16 Aligned_cols=108 Identities=17% Similarity=0.149 Sum_probs=90.8
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-----
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN----- 454 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~----- 454 (503)
.+..+..+|.+++..++|++|+++|++++++.++..+......++.+++.+|+.+|++++|++++++++++.+..
T Consensus 222 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 301 (411)
T 4a1s_A 222 QGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREV 301 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 456788889999999999999999999999887766556667788899999999999999999999998887643
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 010705 455 -VSVLVQRALLYESMEKYKLGAEDLRTVLKIDPS 487 (503)
Q Consensus 455 -~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPe 487 (503)
..+++.+|.+|..+|++++|+++|++++++.++
T Consensus 302 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 335 (411)
T 4a1s_A 302 EAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQE 335 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 678888899999999999999999998887553
No 138
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.11 E-value=2.3e-10 Score=109.45 Aligned_cols=118 Identities=15% Similarity=0.010 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-------CCC
Q 010705 382 AAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQD-------DTN 454 (503)
Q Consensus 382 ~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLd-------Pd~ 454 (503)
..+..+|..++..++|++|+++|++|+++..+..+....+.++.++|.+|..+|+|++|+++|++++++. +..
T Consensus 116 ~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 195 (293)
T 3u3w_A 116 QWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFD 195 (293)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHH
T ss_pred HHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHH
Confidence 3455689999999999999999999998644443333456789999999999999999999999999532 233
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHH
Q 010705 455 VSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSN------RIARSTIHRLT 499 (503)
Q Consensus 455 ~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen------~eAk~~La~Lq 499 (503)
..+++++|.+|..+++|++|++++++++++.++. ..+...+..+.
T Consensus 196 ~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~ 246 (293)
T 3u3w_A 196 VKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECL 246 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999987543 44455555443
No 139
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.08 E-value=1e-09 Score=104.87 Aligned_cols=106 Identities=16% Similarity=0.030 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---cCCCCH--
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLE---QDDTNV-- 455 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALk---LdPd~~-- 455 (503)
...++.+|..+...++|++|+++|++|+++..+..+....+.+|.++|.+|..+++|++|+++|+++++ ..++..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~ 194 (293)
T 2qfc_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccc
Confidence 344567888889999999999999999987554444444577999999999999999999999999994 455542
Q ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 010705 456 --SVLVQRALLYESMEKYKLGAEDLRTVLKIDP 486 (503)
Q Consensus 456 --kAlyrlA~Ay~~LGdyeeAle~LqkALkLDP 486 (503)
.+++++|.+|..+++|++|+++|++++++.+
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999864
No 140
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.08 E-value=7.7e-10 Score=101.95 Aligned_cols=109 Identities=16% Similarity=0.109 Sum_probs=95.2
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-----
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN----- 454 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~----- 454 (503)
.+..+..+|.+++..+++++|+++|++++++.++..+......++..++.+|..+|++++|++++++++++.+..
T Consensus 222 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 301 (338)
T 3ro2_A 222 ERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIG 301 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHH
Confidence 455888999999999999999999999999988776666778899999999999999999999999999885432
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 010705 455 -VSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSN 488 (503)
Q Consensus 455 -~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen 488 (503)
..+++.+|.+|..+|++++|+++|++++++.++.
T Consensus 302 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 336 (338)
T 3ro2_A 302 EGRACWSLGNAYTALGNHDQAMHFAEKHLEISREV 336 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhh
Confidence 5588999999999999999999999999987653
No 141
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.08 E-value=3e-10 Score=110.79 Aligned_cols=109 Identities=15% Similarity=0.159 Sum_probs=98.1
Q ss_pred hHHHHHHHHHHHHHhCC-----------------HHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQ-----------------YADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVA 442 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGD-----------------Y~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALe 442 (503)
.+.++..+|.++...++ |++|+++|++++++.+...+.+....++.+++.+|+.+|++++|++
T Consensus 165 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 244 (411)
T 4a1s_A 165 EGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIE 244 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHH
Confidence 45678889999999999 9999999999999988777677788899999999999999999999
Q ss_pred HHHHHHHcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 010705 443 DCSKVLEQDDTN------VSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSN 488 (503)
Q Consensus 443 daekALkLdPd~------~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen 488 (503)
++++++++.+.. ..+++.+|.+|..++++++|++.|++++++.+..
T Consensus 245 ~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 296 (411)
T 4a1s_A 245 HHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVEL 296 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHc
Confidence 999999987543 2388999999999999999999999999998754
No 142
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.08 E-value=8.2e-10 Score=87.89 Aligned_cols=76 Identities=7% Similarity=0.196 Sum_probs=69.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH--HHHHHHHh
Q 010705 425 STRASCYKEVGEYKKAVADCSKVLEQDDTNVS-VLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIAR--STIHRLTK 500 (503)
Q Consensus 425 sNrAlcylrLGdyeeALedaekALkLdPd~~k-AlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk--~~La~Lqk 500 (503)
.++|.++++.+++++|++.|+++++++|++.. +++.+|.+|..++++++|+++|+++++++|++..+. ..+.++..
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~a~~ 82 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQARKMVMDILN 82 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999 999999999999999999999999999999998876 55555544
No 143
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.08 E-value=1.4e-09 Score=90.26 Aligned_cols=84 Identities=17% Similarity=0.154 Sum_probs=78.7
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 010705 418 ATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHR 497 (503)
Q Consensus 418 pd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~ 497 (503)
+..+..+..+|.+++..++|++|+..|+++++++|++..+++.+|.+|+.++++++|+.+|+++++++|++..+...+..
T Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 85 (137)
T 3q49_B 6 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 85 (137)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999998888887
Q ss_pred HHhh
Q 010705 498 LTKM 501 (503)
Q Consensus 498 Lqkl 501 (503)
+...
T Consensus 86 ~~~~ 89 (137)
T 3q49_B 86 CQLE 89 (137)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7644
No 144
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.07 E-value=4.6e-10 Score=88.42 Aligned_cols=84 Identities=11% Similarity=0.137 Sum_probs=77.9
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHH
Q 010705 418 ATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPS--NRIARSTI 495 (503)
Q Consensus 418 pd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPe--n~eAk~~L 495 (503)
|....++..+|.++++.+++++|+..++++++++|.+..+++.+|.+|..++++++|+++|+++++++|. +..+...+
T Consensus 3 p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l 82 (112)
T 2kck_A 3 DQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAK 82 (112)
T ss_dssp CSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHH
Confidence 4456788999999999999999999999999999999999999999999999999999999999999999 99988888
Q ss_pred HHHHhh
Q 010705 496 HRLTKM 501 (503)
Q Consensus 496 a~Lqkl 501 (503)
..+...
T Consensus 83 ~~~~~~ 88 (112)
T 2kck_A 83 ADALRY 88 (112)
T ss_dssp HHHHTT
T ss_pred HHHHHH
Confidence 877654
No 145
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.07 E-value=3.4e-09 Score=98.78 Aligned_cols=94 Identities=15% Similarity=0.053 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcCCCCHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKE----VGEYKKAVADCSKVLEQDDTNVS 456 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylr----LGdyeeALedaekALkLdPd~~k 456 (503)
+.+++.+|..++..+++++|+++|+++++. ....++.++|.+|.. .+++++|+++|+++++++ ++.
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--------~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~ 75 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACDL--------KENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSN 75 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHH
Confidence 334444455555555555555555554431 122344444444444 444444444444444443 444
Q ss_pred HHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Q 010705 457 VLVQRALLYES----MEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 457 AlyrlA~Ay~~----LGdyeeAle~LqkALkL 484 (503)
+++.+|.+|.. .+++++|+++|++++++
T Consensus 76 a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~ 107 (273)
T 1ouv_A 76 GCHLLGNLYYSGQGVSQNTNKALQYYSKACDL 107 (273)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc
Confidence 44444444444 44444444444444444
No 146
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.06 E-value=1.3e-09 Score=92.38 Aligned_cols=79 Identities=13% Similarity=0.080 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 422 EVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 422 ~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
..++.+|.++++.|++++|+..|+++++++|++..+++.+|.+|..+|++++|+++|+++++++|++.++...+..+..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~ 96 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 96 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 4578899999999999999999999999999999999999999999999999999999999999999998888776654
No 147
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.05 E-value=7.8e-10 Score=99.27 Aligned_cols=98 Identities=12% Similarity=0.061 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQ 460 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyr 460 (503)
..++..+|.++++.++|++|+++|++++++ ++....+++++|.||+.++++++|+++|+++++++|++..++..
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 161 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKI------DKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNS 161 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHH
Confidence 378899999999999999999999999998 56678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHH-HHHHHHHHh
Q 010705 461 RALLYESMEKYKLGA-EDLRTVLKI 484 (503)
Q Consensus 461 lA~Ay~~LGdyeeAl-e~LqkALkL 484 (503)
++.++..+++++++. ..|.+++.+
T Consensus 162 l~~~~~~~~~~~~~~~~~~~~~f~~ 186 (198)
T 2fbn_A 162 YELCVNKLKEARKKDKLTFGGMFDK 186 (198)
T ss_dssp HHHHHHHHHHHHC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999998888 555555543
No 148
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.05 E-value=1.6e-09 Score=87.03 Aligned_cols=86 Identities=17% Similarity=0.138 Sum_probs=80.5
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
....+..+|.+++..+++++|+++|++++++ .+....++..+|.++.+++++++|+++++++++++|++..+++
T Consensus 45 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~ 118 (131)
T 2vyi_A 45 NAVYFCNRAAAYSKLGNYAGAVQDCERAICI------DPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKS 118 (131)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred CHHHHHHHHHHHHHhhchHHHHHHHHHHHhc------CccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHH
Confidence 3678899999999999999999999999998 4556789999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCH
Q 010705 460 QRALLYESMEKY 471 (503)
Q Consensus 460 rlA~Ay~~LGdy 471 (503)
.++.++..++++
T Consensus 119 ~l~~~~~~~~~~ 130 (131)
T 2vyi_A 119 NLKIAELKLREA 130 (131)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHhcC
Confidence 999999999886
No 149
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.03 E-value=6e-09 Score=97.11 Aligned_cols=107 Identities=14% Similarity=0.097 Sum_probs=84.2
Q ss_pred hHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcC
Q 010705 380 TGAAAKNKGVDNQK----AGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKE----VGEYKKAVADCSKVLEQD 451 (503)
Q Consensus 380 ~A~alk~lGn~~fk----qGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylr----LGdyeeALedaekALkLd 451 (503)
...++..+|.++.. .+++++|+++|++|+++ ....++.++|.+|.. .+++++|+++|+++++++
T Consensus 37 ~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--------~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~ 108 (273)
T 1ouv_A 37 ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL--------NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK 108 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC--------CCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC
Confidence 35677888888888 88888888888888866 246788888888888 888888888888888874
Q ss_pred CCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010705 452 DTNVSVLVQRALLYES----MEKYKLGAEDLRTVLKIDPSNRIARSTIHRL 498 (503)
Q Consensus 452 Pd~~kAlyrlA~Ay~~----LGdyeeAle~LqkALkLDPen~eAk~~La~L 498 (503)
++.+++.+|.+|.. .+++++|+++|+++++++ +..+...+..+
T Consensus 109 --~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~ 155 (273)
T 1ouv_A 109 --YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSL 155 (273)
T ss_dssp --CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHH
T ss_pred --CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHH
Confidence 78888888888888 888888888888888876 44555555444
No 150
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.03 E-value=2e-09 Score=103.75 Aligned_cols=115 Identities=10% Similarity=-0.098 Sum_probs=96.0
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMME-VLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVL 458 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~-aysNrAlcylrLGdyeeALedaekALkLdPd~~kAl 458 (503)
....+..+|..+.+.+++++|++.|++++++ .|.... +|.+++.++.++|++++|++.|+++++++|....++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 171 (308)
T 2ond_A 98 NMLLYFAYADYEESRMKYEKVHSIYNRLLAI------EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVY 171 (308)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS------SSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHH
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc------cccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHH
Confidence 4678899999999999999999999999987 334444 899999999999999999999999999988887777
Q ss_pred HHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 459 VQRALLYES-MEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 459 yrlA~Ay~~-LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
+..+.+.+. +|++++|++.|+++++++|++..+...+..+..
T Consensus 172 ~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 214 (308)
T 2ond_A 172 VTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 766665443 689999999999999999988887777666543
No 151
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.01 E-value=2.3e-10 Score=113.76 Aligned_cols=104 Identities=15% Similarity=0.101 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHH
Q 010705 382 AAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQR 461 (503)
Q Consensus 382 ~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrl 461 (503)
.++.++|.++++.++|++|+++|++||++ ++....+|+++|.||+.+++|++|+++|+++++++|++..++..+
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~------~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L 304 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTE------EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRREL 304 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 37889999999999999999999999998 567789999999999999999999999999999999999999999
Q ss_pred HHHH-HHcCCHHHHHHHHHHHHHhCCCCHHH
Q 010705 462 ALLY-ESMEKYKLGAEDLRTVLKIDPSNRIA 491 (503)
Q Consensus 462 A~Ay-~~LGdyeeAle~LqkALkLDPen~eA 491 (503)
+.+. ...++++++.+.|++++.+.|++...
T Consensus 305 ~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~~ 335 (338)
T 2if4_A 305 RALAEQEKALYQKQKEMYKGIFKGKDEGGAK 335 (338)
T ss_dssp -------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 9884 45677888999999999999987643
No 152
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.00 E-value=1.2e-10 Score=121.83 Aligned_cols=103 Identities=12% Similarity=0.131 Sum_probs=91.0
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+..+..+|.++++.++|++|+++|++|+++ +|....+|.++|.+|+++|++++|+++++++++++|++..+++
T Consensus 39 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l------~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~ 112 (477)
T 1wao_1 39 NAIYYGNRSLAYLRTECYGYALGDATRAIEL------DKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKM 112 (477)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 4788999999999999999999999999998 5677899999999999999999999999999999999999999
Q ss_pred HHHHH--HHHcCCHHHHHHHHH-----------HHHHhCCCC
Q 010705 460 QRALL--YESMEKYKLGAEDLR-----------TVLKIDPSN 488 (503)
Q Consensus 460 rlA~A--y~~LGdyeeAle~Lq-----------kALkLDPen 488 (503)
.++.+ +..++++++|++.++ ++++++|+.
T Consensus 113 ~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 113 KYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 99988 888999999999999 888887753
No 153
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.99 E-value=1.5e-09 Score=112.48 Aligned_cols=91 Identities=21% Similarity=0.137 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQ 460 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyr 460 (503)
+.++.++|.++++.++|++|+++|++||++ +|....+|+++|.||+++++|++|+.+|+++++++|++..+++.
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~------~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~ 390 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGL------DSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQ 390 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 678899999999999999999999999999 56678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHH
Q 010705 461 RALLYESMEKYKLGAED 477 (503)
Q Consensus 461 lA~Ay~~LGdyeeAle~ 477 (503)
++.++..++++++|...
T Consensus 391 l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 391 ISMCQKKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988754
No 154
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.99 E-value=3.6e-09 Score=86.05 Aligned_cols=85 Identities=11% Similarity=0.268 Sum_probs=79.3
Q ss_pred ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010705 417 MATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIH 496 (503)
Q Consensus 417 dpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La 496 (503)
.+.....|..+|.++++.+++++|++.++++++++|.+..+++.+|.+|..++++++|+++|+++++++|.+..+...+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 56678899999999999999999999999999999999999999999999999999999999999999999998888887
Q ss_pred HHHhh
Q 010705 497 RLTKM 501 (503)
Q Consensus 497 ~Lqkl 501 (503)
.+...
T Consensus 92 ~~~~~ 96 (133)
T 2lni_A 92 AALEA 96 (133)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76543
No 155
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.98 E-value=7.8e-09 Score=81.77 Aligned_cols=82 Identities=17% Similarity=0.187 Sum_probs=76.1
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 420 MMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 420 ~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
.+..+..+|.+++..+++++|+..++++++++|.+..+++.+|.+|..++++++|++.|+++++++|.+..+...+..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999998888777765
Q ss_pred hh
Q 010705 500 KM 501 (503)
Q Consensus 500 kl 501 (503)
..
T Consensus 83 ~~ 84 (118)
T 1elw_A 83 EF 84 (118)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 156
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.97 E-value=4.4e-09 Score=105.21 Aligned_cols=126 Identities=12% Similarity=0.022 Sum_probs=103.4
Q ss_pred cccHHHhCCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChh-hHHHHHHHHHHHHHcCCHHHHHH
Q 010705 364 GTTTELEGLPPPPAGVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMAT-MMEVLSTRASCYKEVGEYKKAVA 442 (503)
Q Consensus 364 aae~eLEaL~~~~~~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd-~A~aysNrAlcylrLGdyeeALe 442 (503)
.+...++.+....+. .. .++.+|.++++.++|++|+++|++++.. + ++. ...+++++|.++.++|++++|+.
T Consensus 120 eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~----~-d~~~~~~a~~~LG~al~~LG~~~eAl~ 192 (282)
T 4f3v_A 120 DAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKW----P-DKFLAGAAGVAHGVAAANLALFTEAER 192 (282)
T ss_dssp HHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGC----S-CHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhcc----C-CcccHHHHHHHHHHHHHHCCCHHHHHH
Confidence 344455555544443 44 8899999999999999999999987643 2 222 35689999999999999999999
Q ss_pred HHHHHHHcC--CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 010705 443 DCSKVLEQD--DT-NVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHR 497 (503)
Q Consensus 443 daekALkLd--Pd-~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~ 497 (503)
+|++++... |. ...+++++|.|+..+|+.++|++.|++++.++|+ .++...|..
T Consensus 193 ~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL~~ 249 (282)
T 4f3v_A 193 RLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAALKD 249 (282)
T ss_dssp HHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHHHC
T ss_pred HHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHHhC
Confidence 999999654 55 6789999999999999999999999999999999 888777753
No 157
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.96 E-value=2e-09 Score=99.13 Aligned_cols=108 Identities=16% Similarity=0.040 Sum_probs=62.8
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHcCCCCH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVG----EYKKAVADCSKVLEQDDTNV 455 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLG----dyeeALedaekALkLdPd~~ 455 (503)
.+.+++.+|..++..+++++|+++|++|++. .+..++++++.+|.. + ++++|+++|+++++. .++
T Consensus 17 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--------g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~--g~~ 85 (212)
T 3rjv_A 17 DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--------GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVEA--GSK 85 (212)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--------TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT--TCH
T ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC--CCH
Confidence 3566777777777777777777777777653 234555556666555 4 566666666665432 355
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHH
Q 010705 456 SVLVQRALLYES----MEKYKLGAEDLRTVLKIDPS--NRIARSTIHRL 498 (503)
Q Consensus 456 kAlyrlA~Ay~~----LGdyeeAle~LqkALkLDPe--n~eAk~~La~L 498 (503)
.+++++|.+|.. .+++++|+++|++++++.+. +..+...|..+
T Consensus 86 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~ 134 (212)
T 3rjv_A 86 SGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLI 134 (212)
T ss_dssp HHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHH
Confidence 555555555555 55555555555555555542 24444444433
No 158
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.96 E-value=2.5e-09 Score=93.00 Aligned_cols=88 Identities=16% Similarity=0.011 Sum_probs=78.0
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH-HHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNV-SVL 458 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~-kAl 458 (503)
.+.++.++|.++++.++|++|++.|++||++ +|....+|+++|.||+.+|++++|+++|+++++++|++. .+.
T Consensus 62 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~ 135 (162)
T 3rkv_A 62 NIPLYANMSQCYLNIGDLHEAEETSSEVLKR------EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVA 135 (162)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc------CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHH
Confidence 5678999999999999999999999999999 667789999999999999999999999999999999998 566
Q ss_pred HHHHHHHHHcCCHHH
Q 010705 459 VQRALLYESMEKYKL 473 (503)
Q Consensus 459 yrlA~Ay~~LGdyee 473 (503)
..+..+...++++++
T Consensus 136 ~~l~~~~~~~~~~~~ 150 (162)
T 3rkv_A 136 REMKIVTERRAEKKA 150 (162)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHH
Confidence 677777766655443
No 159
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.95 E-value=5e-09 Score=101.01 Aligned_cols=111 Identities=14% Similarity=0.088 Sum_probs=97.8
Q ss_pred hHHHHHHHHHHHHH-------hCCH-------HHHHHHHHHHHH-HHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHH
Q 010705 380 TGAAAKNKGVDNQK-------AGQY-------ADAIKWLSWAVI-LLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADC 444 (503)
Q Consensus 380 ~A~alk~lGn~~fk-------qGDY-------~eAIk~YeKALe-L~pk~~ddpd~A~aysNrAlcylrLGdyeeALeda 444 (503)
.+..|+.+|..+.. .|++ ++|++.|++|++ + .|....+|.+++.++.++|++++|++.|
T Consensus 49 ~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~------~p~~~~~~~~~~~~~~~~~~~~~A~~~~ 122 (308)
T 2ond_A 49 HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL------LKKNMLLYFAYADYEESRMKYEKVHSIY 122 (308)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTT------TTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHh------CcccHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 47788888888764 5885 899999999998 5 4567889999999999999999999999
Q ss_pred HHHHHcCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 010705 445 SKVLEQDDTNVS-VLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIH 496 (503)
Q Consensus 445 ekALkLdPd~~k-AlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La 496 (503)
+++++++|.+.. +|+.++.++..++++++|+..|+++++++|.+..+.....
T Consensus 123 ~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a 175 (308)
T 2ond_A 123 NRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAA 175 (308)
T ss_dssp HHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHH
T ss_pred HHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 999999999887 9999999999999999999999999999998765544333
No 160
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.95 E-value=2.9e-09 Score=98.12 Aligned_cols=108 Identities=14% Similarity=0.046 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcCC
Q 010705 381 GAAAKNKGVDNQKAG----QYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKE----VGEYKKAVADCSKVLEQDD 452 (503)
Q Consensus 381 A~alk~lGn~~fkqG----DY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylr----LGdyeeALedaekALkLdP 452 (503)
+.++..+|..|.. + ++++|+++|++|++. ....++++++.+|+. .+++++|+++|++++++.+
T Consensus 50 ~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~--------g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 120 (212)
T 3rjv_A 50 GDALALLAQLKIR-NPQQADYPQARQLAEKAVEA--------GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSE 120 (212)
T ss_dssp HHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTT
T ss_pred HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCC
Confidence 4455556655555 4 566666666666432 234555555555555 5556666666666555554
Q ss_pred --CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010705 453 --TNVSVLVQRALLYES----MEKYKLGAEDLRTVLKIDPSNRIARSTIHRL 498 (503)
Q Consensus 453 --d~~kAlyrlA~Ay~~----LGdyeeAle~LqkALkLDPen~eAk~~La~L 498 (503)
..+.+++++|.+|.. .+++++|+++|++++++ +.+..+...|..+
T Consensus 121 ~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~ 171 (212)
T 3rjv_A 121 SDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMM 171 (212)
T ss_dssp SHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHH
Confidence 235555666666555 55566666666665555 3344444444443
No 161
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.95 E-value=3.7e-09 Score=87.66 Aligned_cols=87 Identities=14% Similarity=0.131 Sum_probs=75.2
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVL 458 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAl 458 (503)
....++..+|.+++..++|++|+++|++++++ .|....++.++|.|+.++|++++|++.+++++++.|++....
T Consensus 25 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 98 (117)
T 3k9i_A 25 DLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ------FPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQ 98 (117)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 46788999999999999999999999999999 566789999999999999999999999999999999998776
Q ss_pred HHHHHHHHHcCCH
Q 010705 459 VQRALLYESMEKY 471 (503)
Q Consensus 459 yrlA~Ay~~LGdy 471 (503)
.....+....+++
T Consensus 99 ~~~~ai~~~~~~l 111 (117)
T 3k9i_A 99 SYKQAILFYADKL 111 (117)
T ss_dssp HTHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHH
Confidence 5554444444443
No 162
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.95 E-value=1.7e-08 Score=97.99 Aligned_cols=108 Identities=11% Similarity=0.017 Sum_probs=87.0
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--------
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQD-------- 451 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLd-------- 451 (503)
.+.++..+|..++..|++++|+++|++++++.++.++......++.+++.++..+|++++|++.+++++++.
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~ 131 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQL 131 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTS
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccC
Confidence 445677888888889999999999999998877765544556677888889999999999999998888764
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 010705 452 DTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPS 487 (503)
Q Consensus 452 Pd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPe 487 (503)
|....+++.+|.+|..+|++++|++.|++++++.+.
T Consensus 132 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 132 PMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 223556777888888999999999999998888775
No 163
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.94 E-value=7.8e-09 Score=109.95 Aligned_cols=114 Identities=14% Similarity=0.151 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-----CCC-
Q 010705 383 AAKNKGVDNQKAGQYADAIKWLSWAVILLEKS--GDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQD-----DTN- 454 (503)
Q Consensus 383 alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~--~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLd-----Pd~- 454 (503)
.+...+..+..+|+|++|+.+|+++|++..+. ++.++.+..+.+++.+|..+|+|++|+.+++++|++. +++
T Consensus 311 ~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 390 (490)
T 3n71_A 311 DTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNA 390 (490)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 34456667788999999999999999987652 3467889999999999999999999999999999763 454
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHHHHH
Q 010705 455 --VSVLVQRALLYESMEKYKLGAEDLRTVLKI-----DPSNRIARSTIH 496 (503)
Q Consensus 455 --~kAlyrlA~Ay~~LGdyeeAle~LqkALkL-----DPen~eAk~~La 496 (503)
...++++|.+|..+|+|++|+..|+++|++ -|+++.+...+.
T Consensus 391 ~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~ 439 (490)
T 3n71_A 391 QLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEA 439 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 558899999999999999999999999985 578876665443
No 164
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.93 E-value=7.7e-09 Score=108.40 Aligned_cols=113 Identities=9% Similarity=0.112 Sum_probs=95.0
Q ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHh--cCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-----CCC---HHH
Q 010705 388 GVDNQKAGQYADAIKWLSWAVILLEK--SGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQD-----DTN---VSV 457 (503)
Q Consensus 388 Gn~~fkqGDY~eAIk~YeKALeL~pk--~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLd-----Pd~---~kA 457 (503)
.......|+|++|+++|+++|++..+ -++.+..+..+.+++.+|..+|+|++|+.+++++|++. +++ ...
T Consensus 305 ~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~ 384 (433)
T 3qww_A 305 FRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASM 384 (433)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHH
T ss_pred HHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHH
Confidence 33444567899999999999998665 24467889999999999999999999999999999762 444 558
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHh
Q 010705 458 LVQRALLYESMEKYKLGAEDLRTVLKI-----DPSNRIARSTIHRLTK 500 (503)
Q Consensus 458 lyrlA~Ay~~LGdyeeAle~LqkALkL-----DPen~eAk~~La~Lqk 500 (503)
++++|.+|..+|+|++|+..|+++|++ .|+++.+......|++
T Consensus 385 l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l~~ 432 (433)
T 3qww_A 385 WLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEIES 432 (433)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHhc
Confidence 999999999999999999999999986 5889888876666653
No 165
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.92 E-value=1.1e-08 Score=90.45 Aligned_cols=96 Identities=14% Similarity=0.035 Sum_probs=80.9
Q ss_pred HHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC--HHHH
Q 010705 382 AAAKNKGVDN-QKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN--VSVL 458 (503)
Q Consensus 382 ~alk~lGn~~-fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~--~kAl 458 (503)
..+...+... ....+..+|++.|++++++ +|.+..++.++|.++.++|++++|+..|+++++++|++ ..++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~a~~~~~~al~~------~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~ 147 (176)
T 2r5s_A 74 SYKSLIAKLELHQQAAESPELKRLEQELAA------NPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVK 147 (176)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHH------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHH
T ss_pred HHHHHHHHHHHHhhcccchHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHH
Confidence 3333444333 2334455689999999998 66778999999999999999999999999999999976 6699
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 459 VQRALLYESMEKYKLGAEDLRTVLK 483 (503)
Q Consensus 459 yrlA~Ay~~LGdyeeAle~LqkALk 483 (503)
+.++.+|..+|++++|+.+|+++|.
T Consensus 148 ~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 148 KTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 9999999999999999999999875
No 166
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=9.4e-09 Score=85.30 Aligned_cols=84 Identities=19% Similarity=0.193 Sum_probs=77.1
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 010705 418 ATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN---VSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARST 494 (503)
Q Consensus 418 pd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~---~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~ 494 (503)
+..+..+..+|.++++.+++++|++.|+++++++|++ ..+++.+|.+|..++++++|+++|+++++++|++..+...
T Consensus 25 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 104 (148)
T 2dba_A 25 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYR 104 (148)
T ss_dssp CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHH
Confidence 4567889999999999999999999999999999987 8999999999999999999999999999999999888877
Q ss_pred HHHHHhh
Q 010705 495 IHRLTKM 501 (503)
Q Consensus 495 La~Lqkl 501 (503)
+..+...
T Consensus 105 ~a~~~~~ 111 (148)
T 2dba_A 105 RSQALEK 111 (148)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766543
No 167
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.89 E-value=2.7e-08 Score=79.12 Aligned_cols=81 Identities=22% Similarity=0.273 Sum_probs=75.2
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 420 MMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 420 ~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
...++..++.++.+.+++++|++.++++++++|.+..+++.++.+|..++++++|+..|+++++++|.+..+...+..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999988877777664
Q ss_pred h
Q 010705 500 K 500 (503)
Q Consensus 500 k 500 (503)
.
T Consensus 88 ~ 88 (125)
T 1na0_A 88 Y 88 (125)
T ss_dssp H
T ss_pred H
Confidence 4
No 168
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.89 E-value=6.2e-09 Score=105.57 Aligned_cols=93 Identities=17% Similarity=0.156 Sum_probs=86.7
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+.++.++|.++++.++|++|+++|++||++ +|....+|+++|.||++++++++|+++|+++++++|++..++.
T Consensus 272 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~------~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~ 345 (370)
T 1ihg_A 272 ALSCVLNIGACKLKMSDWQGAVDSCLEALEI------DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQA 345 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHh------CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 5678899999999999999999999999988 5677899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHH
Q 010705 460 QRALLYESMEKYKLGAEDL 478 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~L 478 (503)
.++.++..+++++++.+.+
T Consensus 346 ~l~~~~~~~~~~~~a~k~~ 364 (370)
T 1ihg_A 346 ELLKVKQKIKAQKDKEKAA 364 (370)
T ss_dssp HHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887653
No 169
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.89 E-value=9.8e-09 Score=84.25 Aligned_cols=80 Identities=15% Similarity=0.071 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHH
Q 010705 422 EVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNV---SVLVQRALLYESMEKYKLGAEDLRTVLKIDPSN---RIARSTI 495 (503)
Q Consensus 422 ~aysNrAlcylrLGdyeeALedaekALkLdPd~~---kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen---~eAk~~L 495 (503)
..++++|.++++.|++++|++.++++++++|++. .+++.+|.+|+.+|++++|++.|+++++++|++ .++...+
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 3577899999999999999999999999999988 899999999999999999999999999999999 7777777
Q ss_pred HHHHhh
Q 010705 496 HRLTKM 501 (503)
Q Consensus 496 a~Lqkl 501 (503)
..+...
T Consensus 83 a~~~~~ 88 (129)
T 2xev_A 83 GLSQYG 88 (129)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766543
No 170
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.88 E-value=2.8e-08 Score=82.90 Aligned_cols=83 Identities=18% Similarity=0.171 Sum_probs=72.9
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcC-CChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSG-DMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVL 458 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~-ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAl 458 (503)
.+..++.+|..++..++|..|+.+|++|+++.+... .......++.++|.|++++|++++|+..++++++++|++..++
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 366788999999999999999999999999865432 1345788999999999999999999999999999999999998
Q ss_pred HHHH
Q 010705 459 VQRA 462 (503)
Q Consensus 459 yrlA 462 (503)
.++.
T Consensus 84 ~n~~ 87 (104)
T 2v5f_A 84 GNLK 87 (104)
T ss_dssp HHHH
T ss_pred hhHH
Confidence 8876
No 171
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.86 E-value=1.7e-08 Score=81.31 Aligned_cols=81 Identities=16% Similarity=0.113 Sum_probs=73.2
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHH
Q 010705 420 MMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSN-------RIAR 492 (503)
Q Consensus 420 ~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen-------~eAk 492 (503)
.+..+..+|.+++..+++++|+..++++++++|.+..+++.+|.+|..++++++|+.+|+++++++|.+ ..+.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999999998876 6666
Q ss_pred HHHHHHHh
Q 010705 493 STIHRLTK 500 (503)
Q Consensus 493 ~~La~Lqk 500 (503)
..+..+..
T Consensus 83 ~~la~~~~ 90 (131)
T 1elr_A 83 ARIGNSYF 90 (131)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665543
No 172
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.85 E-value=1.5e-08 Score=93.67 Aligned_cols=81 Identities=14% Similarity=0.126 Sum_probs=72.7
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-------CHH-----HHHHHHHHHHHcCCHHHHHHHHHHHHHh---
Q 010705 420 MMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDT-------NVS-----VLVQRALLYESMEKYKLGAEDLRTVLKI--- 484 (503)
Q Consensus 420 ~A~aysNrAlcylrLGdyeeALedaekALkLdPd-------~~k-----AlyrlA~Ay~~LGdyeeAle~LqkALkL--- 484 (503)
.+..+.++|.+++++|+|++|++.|+++|+++|+ +.. +|+++|.+|..+|+|++|+++|+++|++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 4678899999999999999999999999999999 555 9999999999999999999999999999
Q ss_pred ----CCCCHHHH----HHHHHHHh
Q 010705 485 ----DPSNRIAR----STIHRLTK 500 (503)
Q Consensus 485 ----DPen~eAk----~~La~Lqk 500 (503)
+|++..+. ..+..+..
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~ 113 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALD 113 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHH
T ss_pred cccCCCchHHHHHHHHHhHHHHHH
Confidence 99998887 66555543
No 173
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.83 E-value=5.3e-08 Score=94.55 Aligned_cols=107 Identities=10% Similarity=-0.074 Sum_probs=94.3
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCC--hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC----
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDM--ATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDT---- 453 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~dd--pd~A~aysNrAlcylrLGdyeeALedaekALkLdPd---- 453 (503)
.+..+..+|.+++..|+|++|+++|++++++.++.... +....++.+++.+++.+|++++|++.+++++.+.+.
T Consensus 92 ~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 171 (373)
T 1hz4_A 92 ALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQ 171 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGG
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcH
Confidence 35567889999999999999999999999998765543 567788999999999999999999999999998765
Q ss_pred -CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 010705 454 -NVSVLVQRALLYESMEKYKLGAEDLRTVLKIDP 486 (503)
Q Consensus 454 -~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDP 486 (503)
...+++.++.++...|++++|++.+++++++.+
T Consensus 172 ~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 172 QQLQCLAMLIQCSLARGDLDNARSQLNRLENLLG 205 (373)
T ss_dssp GGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence 356888999999999999999999999998843
No 174
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.83 E-value=2e-08 Score=104.78 Aligned_cols=120 Identities=10% Similarity=0.067 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh--cCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-----CC
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEK--SGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQD-----DT 453 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk--~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLd-----Pd 453 (503)
+..+...-..+.++++|++|+++|++++++..+ -++.+..+.++.+++.+|..+|+|++|+.+++++|++. ++
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~ 366 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS 366 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC
Confidence 344555566788899999999999999986443 23467789999999999999999999999999999763 44
Q ss_pred C---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHh
Q 010705 454 N---VSVLVQRALLYESMEKYKLGAEDLRTVLKI-----DPSNRIARSTIHRLTK 500 (503)
Q Consensus 454 ~---~kAlyrlA~Ay~~LGdyeeAle~LqkALkL-----DPen~eAk~~La~Lqk 500 (503)
+ ...++++|.+|..+|+|++|+..|++++++ -|+++.+...+..+.+
T Consensus 367 Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~ 421 (429)
T 3qwp_A 367 HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEE 421 (429)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Confidence 4 558999999999999999999999999986 5888877766555443
No 175
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.83 E-value=1.7e-08 Score=93.00 Aligned_cols=100 Identities=13% Similarity=0.111 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHcC-C-CCHHHHHHHHHHHHHcCCH
Q 010705 397 YADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVG---EYKKAVADCSKVLEQD-D-TNVSVLVQRALLYESMEKY 471 (503)
Q Consensus 397 Y~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLG---dyeeALedaekALkLd-P-d~~kAlyrlA~Ay~~LGdy 471 (503)
...+.+.|.++++. .+...++.+++|.|+.+.+ +.++++..++.+++.+ | +..+++|++|.+|+++++|
T Consensus 14 l~~~~~~y~~e~~~------~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y 87 (152)
T 1pc2_A 14 LLKFEKKFQSEKAA------GSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEY 87 (152)
T ss_dssp HHHHHHHHHHHHHT------TCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHHHHHHHHHcc------CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCH
Confidence 34455666666543 3346789999999999988 7789999999999998 7 5689999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHhhh
Q 010705 472 KLGAEDLRTVLKIDPSNRIARSTIHRLTKMV 502 (503)
Q Consensus 472 eeAle~LqkALkLDPen~eAk~~La~LqklL 502 (503)
++|+++++++|+++|+|.+++.....+++.+
T Consensus 88 ~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~ 118 (152)
T 1pc2_A 88 EKALKYVRGLLQTEPQNNQAKELERLIDKAM 118 (152)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999988888777653
No 176
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.83 E-value=1.2e-08 Score=98.49 Aligned_cols=105 Identities=13% Similarity=-0.020 Sum_probs=88.6
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH---------------------------h-cCCChhhHHHHHHHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLE---------------------------K-SGDMATMMEVLSTRASCY 431 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~p---------------------------k-~~ddpd~A~aysNrAlcy 431 (503)
...++..+|.++...|++++|++.|++++++.+ + ...+|++..+++++|.+|
T Consensus 150 ~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l 229 (287)
T 3qou_A 150 NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQL 229 (287)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHH
Confidence 467888889999999998888877776532110 0 011567789999999999
Q ss_pred HHcCCHHHHHHHHHHHHHcCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 010705 432 KEVGEYKKAVADCSKVLEQDDTN--VSVLVQRALLYESMEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 432 lrLGdyeeALedaekALkLdPd~--~kAlyrlA~Ay~~LGdyeeAle~LqkALkL 484 (503)
+..|++++|++.|+++++++|++ ..++.+++.+|..+|+.++|+..|+++|..
T Consensus 230 ~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 230 HQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 99999999999999999999999 899999999999999999999999998863
No 177
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.81 E-value=2e-08 Score=81.93 Aligned_cols=83 Identities=8% Similarity=-0.020 Sum_probs=68.7
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--CHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDT--NVSV 457 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd--~~kA 457 (503)
.+..++.+|.++++.++|++|+++|++++++ +|....+|.++|.||.++|++++|++.|++++++.|. +..+
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~ 79 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVET------DPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKD 79 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhH
Confidence 4778999999999999999999999999999 5666789999999999999999999999999998653 3334
Q ss_pred HHHHHHHHHHc
Q 010705 458 LVQRALLYESM 468 (503)
Q Consensus 458 lyrlA~Ay~~L 468 (503)
...+..++...
T Consensus 80 ~~~l~~~l~~~ 90 (100)
T 3ma5_A 80 LSELQDAKLKA 90 (100)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 44444444433
No 178
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.81 E-value=3.8e-08 Score=85.74 Aligned_cols=99 Identities=11% Similarity=0.040 Sum_probs=87.4
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 010705 387 KGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKE----VGEYKKAVADCSKVLEQDDTNVSVLVQRA 462 (503)
Q Consensus 387 lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylr----LGdyeeALedaekALkLdPd~~kAlyrlA 462 (503)
+|..|.....+++|+++|++|++. .+..++++++.+|.. .+++++|+++|+++.++ .++.+++++|
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--------g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg 100 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--------NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILG 100 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--------CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHH
Confidence 899999999999999999999976 357899999999999 89999999999999987 6899999999
Q ss_pred HHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 010705 463 LLYES----MEKYKLGAEDLRTVLKIDPSNRIARSTIHR 497 (503)
Q Consensus 463 ~Ay~~----LGdyeeAle~LqkALkLDPen~eAk~~La~ 497 (503)
.+|.. .+++++|+++|+++.++ .+..+...|.+
T Consensus 101 ~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A~~~l~~ 137 (138)
T 1klx_A 101 YKQYAGKGVVKNEKQAVKTFEKACRL--GSEDACGILNN 137 (138)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHC--
T ss_pred HHHHCCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHhh
Confidence 99999 99999999999999998 45566555443
No 179
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.80 E-value=3.5e-08 Score=82.24 Aligned_cols=83 Identities=13% Similarity=0.048 Sum_probs=72.1
Q ss_pred hhhHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HH
Q 010705 418 ATMMEVLSTRASCYKEVGE---YKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNR---IA 491 (503)
Q Consensus 418 pd~A~aysNrAlcylrLGd---yeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~---eA 491 (503)
|.++.++..+|.+++..++ .++|.+.++++|+++|+++++++.+|.+++..|+|++|+++|+++++.+|+++ .+
T Consensus 3 p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~~~~i 82 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLDRVTI 82 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCCHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHH
Confidence 5567899999999987776 79999999999999999999999999999999999999999999999999853 44
Q ss_pred HHHHHHHHh
Q 010705 492 RSTIHRLTK 500 (503)
Q Consensus 492 k~~La~Lqk 500 (503)
...+.++++
T Consensus 83 ~~~I~~A~~ 91 (93)
T 3bee_A 83 IESINKAKK 91 (93)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 445554443
No 180
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.80 E-value=3.9e-08 Score=105.78 Aligned_cols=115 Identities=10% Similarity=0.041 Sum_probs=105.9
Q ss_pred hHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcC--CHHHHHHHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQ----------YADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVG--EYKKAVADCSKV 447 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGD----------Y~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLG--dyeeALedaekA 447 (503)
...+|..++.++.+.++ |++|+++|++++++ +|....+|+.|+.++.+++ ++++++++|+++
T Consensus 62 ~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~------~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~ 135 (567)
T 1dce_A 62 FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV------NPKSYGTWHHRCWLLSRLPEPNWARELELCARF 135 (567)
T ss_dssp CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcccccHHHHHHHHHHH
Confidence 57889999999999888 99999999999998 6677899999999999999 779999999999
Q ss_pred HHcCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 448 LEQDDTNVSVLVQRALLYESME-KYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 448 LkLdPd~~kAlyrlA~Ay~~LG-dyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
++++|++..||+.++.++..++ .+++++++++++++++|.|..+......+..
T Consensus 136 l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~ 189 (567)
T 1dce_A 136 LEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLP 189 (567)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHH
T ss_pred HhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHH
Confidence 9999999999999999999999 9999999999999999999888777666543
No 181
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.79 E-value=2.6e-08 Score=107.17 Aligned_cols=116 Identities=10% Similarity=0.011 Sum_probs=107.1
Q ss_pred hHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHcCCCCHH
Q 010705 380 TGAAAKNKGVDNQKAG--QYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVG-EYKKAVADCSKVLEQDDTNVS 456 (503)
Q Consensus 380 ~A~alk~lGn~~fkqG--DY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLG-dyeeALedaekALkLdPd~~k 456 (503)
...+|..++.++.+.+ +|++|+++|.+++++ ++.+..+|..|+.++.+++ .+++++++++++|+++|.+..
T Consensus 106 ~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~------d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~s 179 (567)
T 1dce_A 106 SYGTWHHRCWLLSRLPEPNWARELELCARFLEA------DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYS 179 (567)
T ss_dssp CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHH
T ss_pred CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhh------ccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCcc
Confidence 5788999999999999 779999999999999 6678899999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHc--------------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 457 VLVQRALLYESM--------------EKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 457 AlyrlA~Ay~~L--------------GdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
+|+.++.++..+ +++++|+++++++++++|++..+...++.+...
T Consensus 180 aW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~ 238 (567)
T 1dce_A 180 SWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGR 238 (567)
T ss_dssp HHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhc
Confidence 999999999986 668999999999999999999998888877543
No 182
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.78 E-value=3e-08 Score=81.28 Aligned_cols=84 Identities=12% Similarity=0.055 Sum_probs=70.2
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--CHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDT--NVSV 457 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd--~~kA 457 (503)
....+..+|.+++..++|++|+++|++++++ +|....+|.++|.||..+|++++|++.|+++++++|. +..+
T Consensus 18 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 91 (115)
T 2kat_A 18 NMLLRFTLGKTYAEHEQFDAALPHLRAALDF------DPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQV 91 (115)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHH------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHH
Confidence 4778999999999999999999999999998 5667889999999999999999999999999999874 3444
Q ss_pred HHHHHHHHHHcC
Q 010705 458 LVQRALLYESME 469 (503)
Q Consensus 458 lyrlA~Ay~~LG 469 (503)
+..+..++..++
T Consensus 92 ~~~l~~~l~~l~ 103 (115)
T 2kat_A 92 VKELQVFLRRLA 103 (115)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 444444444433
No 183
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.76 E-value=3.9e-08 Score=94.75 Aligned_cols=82 Identities=17% Similarity=0.152 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 420 MMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 420 ~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
.+..+.++|.++++.|+|++|++.|+++++++|++..+++++|.+|..++++++|++.|+++++++|++..+...+..+.
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999888887765
Q ss_pred hh
Q 010705 500 KM 501 (503)
Q Consensus 500 kl 501 (503)
..
T Consensus 83 ~~ 84 (281)
T 2c2l_A 83 LE 84 (281)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 184
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.73 E-value=1.1e-07 Score=79.21 Aligned_cols=81 Identities=15% Similarity=0.061 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 010705 421 MEVLSTRASCYKEVGEYKKAVADCSKVLEQD-------DTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARS 493 (503)
Q Consensus 421 A~aysNrAlcylrLGdyeeALedaekALkLd-------Pd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~ 493 (503)
+.-++.+|..+++.++|++|+.++++|+++. .....+++.+|.+|+.+|++++|+..++++++++|++..+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 4567889999999999999999999999863 345788999999999999999999999999999999999988
Q ss_pred HHHHHHhh
Q 010705 494 TIHRLTKM 501 (503)
Q Consensus 494 ~La~Lqkl 501 (503)
.+..++++
T Consensus 85 n~~~~~~~ 92 (104)
T 2v5f_A 85 NLKYFEYI 92 (104)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 77766554
No 185
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.69 E-value=8e-08 Score=102.20 Aligned_cols=117 Identities=8% Similarity=-0.079 Sum_probs=98.2
Q ss_pred CCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh--cCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--
Q 010705 375 PPAGVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEK--SGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ-- 450 (503)
Q Consensus 375 ~~~~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk--~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkL-- 450 (503)
......+..+.++|.+|..+|+|++|+.+|+++|++..+ -++.|+.+..+.|+|.+|..+|+|++|+..|++|+++
T Consensus 345 ~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~ 424 (490)
T 3n71_A 345 DTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILL 424 (490)
T ss_dssp TTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 344457888999999999999999999999999998776 3457889999999999999999999999999999976
Q ss_pred ---CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 010705 451 ---DDTN---VSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIA 491 (503)
Q Consensus 451 ---dPd~---~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eA 491 (503)
.|++ .+.+-.++.++..+++|++|...|+++.+..-++..+
T Consensus 425 ~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~~~~~~~ 471 (490)
T 3n71_A 425 VTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNNQPM 471 (490)
T ss_dssp HHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred HHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3565 4566788999999999999999999998765444433
No 186
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.69 E-value=2.9e-08 Score=91.72 Aligned_cols=70 Identities=13% Similarity=0.140 Sum_probs=63.9
Q ss_pred hHHHHHHHHHHHHHhCCH----------HHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcC-----------CHH
Q 010705 380 TGAAAKNKGVDNQKAGQY----------ADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVG-----------EYK 438 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY----------~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLG-----------dye 438 (503)
.++.+.++|.++...+++ ++|+..|++||++ +|....+|+++|.+|..++ +++
T Consensus 35 ~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l------dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~ 108 (158)
T 1zu2_A 35 DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI------DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFD 108 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh------CcCcHHHHHHHHHHHHHhcccCcchhhhhccHH
Confidence 588999999999998775 5999999999999 6778999999999999885 899
Q ss_pred HHHHHHHHHHHcCCCCH
Q 010705 439 KAVADCSKVLEQDDTNV 455 (503)
Q Consensus 439 eALedaekALkLdPd~~ 455 (503)
+|+++|++||+++|++.
T Consensus 109 eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 109 LATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHhCCCCH
Confidence 99999999999999874
No 187
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.66 E-value=2.4e-07 Score=92.98 Aligned_cols=116 Identities=13% Similarity=-0.017 Sum_probs=104.9
Q ss_pred hHHHHHHHHHHH----HHh---CCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHc
Q 010705 380 TGAAAKNKGVDN----QKA---GQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYK--KAVADCSKVLEQ 450 (503)
Q Consensus 380 ~A~alk~lGn~~----fkq---GDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdye--eALedaekALkL 450 (503)
...++..++.++ ... +++.++++++.+++++ +|....+|+.|+.++.++++++ ++++.++++|++
T Consensus 102 ~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~------~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~ 175 (306)
T 3dra_A 102 NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSS------DPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDT 175 (306)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHh
Confidence 456777778777 666 7999999999999998 6677899999999999999998 999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCC------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 451 DDTNVSVLVQRALLYESMEK------YKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 451 dPd~~kAlyrlA~Ay~~LGd------yeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
+|.+..+|+.++.++..+++ ++++++++++++.++|.|..+...++.+...
T Consensus 176 d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~ 232 (306)
T 3dra_A 176 DLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHER 232 (306)
T ss_dssp CTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHh
Confidence 99999999999999999998 9999999999999999999998887776654
No 188
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.65 E-value=3e-07 Score=92.23 Aligned_cols=113 Identities=13% Similarity=0.010 Sum_probs=98.3
Q ss_pred hHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHH----HHc---CCHHHHHHHHHHHHHc
Q 010705 380 TGAAAKNKGVDNQKAG--QYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCY----KEV---GEYKKAVADCSKVLEQ 450 (503)
Q Consensus 380 ~A~alk~lGn~~fkqG--DY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcy----lrL---GdyeeALedaekALkL 450 (503)
...++..++.++...+ ++++|++++.++|.+ .|...++|+.|..++ ..+ ++++++++.++++|++
T Consensus 66 ~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~------nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~ 139 (306)
T 3dra_A 66 HYTIWIYRFNILKNLPNRNLYDELDWCEEIALD------NEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSS 139 (306)
T ss_dssp CHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH------CTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH------CcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHh
Confidence 5778888999998888 999999999999988 566678999999998 667 7899999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010705 451 DDTNVSVLVQRALLYESMEKYK--LGAEDLRTVLKIDPSNRIARSTIHRL 498 (503)
Q Consensus 451 dPd~~kAlyrlA~Ay~~LGdye--eAle~LqkALkLDPen~eAk~~La~L 498 (503)
+|++..+|+.++.++..+++++ ++++.+.++++++|.|-.+......+
T Consensus 140 ~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~l 189 (306)
T 3dra_A 140 DPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFL 189 (306)
T ss_dssp CTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 9999999999999999999988 99999999999999987776554443
No 189
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.62 E-value=2.6e-07 Score=95.43 Aligned_cols=114 Identities=11% Similarity=-0.065 Sum_probs=92.5
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhh-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATM-MEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVL 458 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~-A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAl 458 (503)
....+..++..+.+.|++++|++.|++++++ .+.. ..+|.+++.++.+.|++++|++.|+++++..|.....+
T Consensus 320 ~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~ 393 (530)
T 2ooe_A 320 NMLLYFAYADYEESRMKYEKVHSIYNRLLAI------EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVY 393 (530)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS------SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHH
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHhCc------cccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHH
Confidence 5778999999999999999999999999987 3333 35888888888888888888888888888888777777
Q ss_pred HHHHHH-HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 459 VQRALL-YESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 459 yrlA~A-y~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
+..+.+ +..+|++++|+..|+++++++|++..+...+..+.
T Consensus 394 ~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~ 435 (530)
T 2ooe_A 394 VTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYL 435 (530)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 666655 34588888888888888888888877776666554
No 190
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.62 E-value=2.1e-07 Score=95.25 Aligned_cols=105 Identities=17% Similarity=0.072 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcCCC
Q 010705 381 GAAAKNKGVDNQKAG---QYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKE----VGEYKKAVADCSKVLEQDDT 453 (503)
Q Consensus 381 A~alk~lGn~~fkqG---DY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylr----LGdyeeALedaekALkLdPd 453 (503)
..++..+|..++..+ ++++|+++|++|++. ....++++++.+|.. .+++++|+++|+++++..
T Consensus 328 ~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--------~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~-- 397 (490)
T 2xm6_A 328 ATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--------GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG-- 397 (490)
T ss_dssp HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--
Confidence 345556666666544 666667777666654 235677888888888 788888888888888764
Q ss_pred CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCC---CHHHHHHH
Q 010705 454 NVSVLVQRALLYES----MEKYKLGAEDLRTVLKIDPS---NRIARSTI 495 (503)
Q Consensus 454 ~~kAlyrlA~Ay~~----LGdyeeAle~LqkALkLDPe---n~eAk~~L 495 (503)
++.+++++|.+|.. .+++++|+++|+++++++|+ +..+...+
T Consensus 398 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~~a~~~l 446 (490)
T 2xm6_A 398 LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITE 446 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCHHHHHHH
Confidence 57888888888887 78888888888888888844 55554444
No 191
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.60 E-value=8.9e-07 Score=90.93 Aligned_cols=112 Identities=17% Similarity=0.101 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVG-EYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLG-dyeeALedaekALkLdPd~~kAly 459 (503)
..++-.+.....+....++|+++++++|++ +|...++|+.|+.++..++ .++++++.++++|+++|++..+|+
T Consensus 54 ~~~~~~~r~~~~~~e~se~AL~lt~~~L~~------nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~ 127 (349)
T 3q7a_A 54 KDAMDYFRAIAAKEEKSERALELTEIIVRM------NPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWH 127 (349)
T ss_dssp HHHHHHHHHHHHTTCCSHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHh------CchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHH
Confidence 333433444444555567899999999999 7788999999999999999 599999999999999999999999
Q ss_pred HHHHHHHHc-C-CHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010705 460 QRALLYESM-E-KYKLGAEDLRTVLKIDPSNRIARSTIHRL 498 (503)
Q Consensus 460 rlA~Ay~~L-G-dyeeAle~LqkALkLDPen~eAk~~La~L 498 (503)
.++.++..+ + +++++++.+.++|+++|.|..+-...+.+
T Consensus 128 hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wv 168 (349)
T 3q7a_A 128 HRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWL 168 (349)
T ss_dssp HHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 999999998 8 99999999999999999998776554444
No 192
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.58 E-value=8.9e-07 Score=90.19 Aligned_cols=113 Identities=11% Similarity=0.017 Sum_probs=101.8
Q ss_pred hHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHcCCCCHH
Q 010705 380 TGAAAKNKGVDNQKAG--QYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGE-YKKAVADCSKVLEQDDTNVS 456 (503)
Q Consensus 380 ~A~alk~lGn~~fkqG--DY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGd-yeeALedaekALkLdPd~~k 456 (503)
...++..++.++.+.+ +++++++++.+++++ ++.+..+|+.|+.+...++. +++++++++++|+++|.+..
T Consensus 107 ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~------dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~S 180 (331)
T 3dss_A 107 SYGTWHHRCWLLSRLPEPNWARELELCARFLEA------DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYS 180 (331)
T ss_dssp CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHH
T ss_pred CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHH
Confidence 5788999999998888 499999999999998 66778999999999999999 69999999999999999999
Q ss_pred HHHHHHHHHHHc--------------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010705 457 VLVQRALLYESM--------------EKYKLGAEDLRTVLKIDPSNRIARSTIHRL 498 (503)
Q Consensus 457 AlyrlA~Ay~~L--------------GdyeeAle~LqkALkLDPen~eAk~~La~L 498 (503)
+|+.++.++..+ +.++++++++.+++.++|+|..+...++-+
T Consensus 181 AW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~l 236 (331)
T 3dss_A 181 SWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWL 236 (331)
T ss_dssp HHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 999999999988 568999999999999999999887766544
No 193
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.57 E-value=1.1e-06 Score=89.96 Aligned_cols=108 Identities=16% Similarity=0.097 Sum_probs=77.6
Q ss_pred hHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcC
Q 010705 380 TGAAAKNKGVDNQK----AGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKE----VGEYKKAVADCSKVLEQD 451 (503)
Q Consensus 380 ~A~alk~lGn~~fk----qGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylr----LGdyeeALedaekALkLd 451 (503)
.+.+++.+|..|+. .+++++|+++|++|++. ....++.++|.+|.. .+++++|+++|+++++.
T Consensus 74 ~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--------~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~- 144 (490)
T 2xm6_A 74 YTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--------GLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ- 144 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-
Confidence 45677778888887 78888888888888754 235677777777777 77778888888777765
Q ss_pred CCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 452 DTNVSVLVQRALLYES----MEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 452 Pd~~kAlyrlA~Ay~~----LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
.++.+++.+|.+|.. .+++++|+++|+++++. .+..+...|..+.
T Consensus 145 -~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y 193 (490)
T 2xm6_A 145 -GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ--GNVWSCNQLGYMY 193 (490)
T ss_dssp -TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHH
Confidence 467777777777777 67777777777777765 3555555555543
No 194
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.49 E-value=2.4e-06 Score=87.00 Aligned_cols=115 Identities=11% Similarity=0.045 Sum_probs=101.6
Q ss_pred hHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCC--HHHHHHHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQ----------YADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGE--YKKAVADCSKV 447 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGD----------Y~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGd--yeeALedaekA 447 (503)
...++..++.++...++ +.++++++.+++.. +|....+|+.|+.|+..+++ ++++++.|+++
T Consensus 63 ~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~------~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~ 136 (331)
T 3dss_A 63 FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV------NPKSYGTWHHRCWLLSRLPEPNWARELELCARF 136 (331)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHhccCcccHHHHHHHHHHH
Confidence 57788888888776665 78999999999988 56678999999999999994 99999999999
Q ss_pred HHcCCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 448 LEQDDTNVSVLVQRALLYESMEK-YKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 448 LkLdPd~~kAlyrlA~Ay~~LGd-yeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
++++|.+..+|+.++.++..+++ ++++++++.++++++|.|..+......+..
T Consensus 137 l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~ 190 (331)
T 3dss_A 137 LEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLP 190 (331)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999 699999999999999999888666655543
No 195
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.49 E-value=6.6e-07 Score=88.00 Aligned_cols=106 Identities=10% Similarity=0.075 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC----------------------------------------Chhh
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGD----------------------------------------MATM 420 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~d----------------------------------------dpd~ 420 (503)
..++..+|..|++.|+|++|+++|.+++++.+...+ ....
T Consensus 55 ~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 134 (434)
T 4b4t_Q 55 ETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLK 134 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHH
Confidence 345677788888888888888777777766543322 2233
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 010705 421 MEVLSTRASCYKEVGEYKKAVADCSKVLEQD------DTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDP 486 (503)
Q Consensus 421 A~aysNrAlcylrLGdyeeALedaekALkLd------Pd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDP 486 (503)
+.++.++|.+|..+|+|++|+..+++++... +....+++.++.+|..+++|++|...|++++++.+
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 4455566666666666666666666655431 22244566666666666666666666666666643
No 196
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.48 E-value=4.7e-07 Score=89.07 Aligned_cols=106 Identities=12% Similarity=0.101 Sum_probs=88.6
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVL 458 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAl 458 (503)
..+..+..+|..++..|+|.+|+++|++++....+..+.+..++++.+++.+|..+++|++|+..+++++.+.+......
T Consensus 133 ~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 212 (434)
T 4b4t_Q 133 LKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPT 212 (434)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCch
Confidence 45667888999999999999999999999999888877888999999999999999999999999999998865443344
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Q 010705 459 VQRALLYESMEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 459 yrlA~Ay~~LGdyeeAle~LqkALkL 484 (503)
...+.++..++.+..+...|.++.+.
T Consensus 213 ~~~~~~~~~~g~~~~~~~~y~~A~~~ 238 (434)
T 4b4t_Q 213 QTVAELDLMSGILHCEDKDYKTAFSY 238 (434)
T ss_dssp HHHHHHHHHHHHHTTSSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 56677777777776666677766653
No 197
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.47 E-value=8.3e-07 Score=91.74 Aligned_cols=106 Identities=14% Similarity=0.086 Sum_probs=94.3
Q ss_pred hHHHHHHHHHHHHH-------hCCHH-------HHHHHHHHHHH-HHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHH
Q 010705 380 TGAAAKNKGVDNQK-------AGQYA-------DAIKWLSWAVI-LLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADC 444 (503)
Q Consensus 380 ~A~alk~lGn~~fk-------qGDY~-------eAIk~YeKALe-L~pk~~ddpd~A~aysNrAlcylrLGdyeeALeda 444 (503)
....+...+..+.+ .|+++ +|++.|++|++ + .|....+|..++.++.+.|++++|++.|
T Consensus 271 ~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~------~p~~~~l~~~~~~~~~~~g~~~~A~~~~ 344 (530)
T 2ooe_A 271 HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL------LKKNMLLYFAYADYEESRMKYEKVHSIY 344 (530)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTT------CSSCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHh------CcccHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 46788889988876 79987 89999999996 5 4567899999999999999999999999
Q ss_pred HHHHHcCCCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 010705 445 SKVLEQDDTNV-SVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIA 491 (503)
Q Consensus 445 ekALkLdPd~~-kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eA 491 (503)
++++++.|.+. .+|+.++.++..++++++|++.|+++++..|.+..+
T Consensus 345 ~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~ 392 (530)
T 2ooe_A 345 NRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHV 392 (530)
T ss_dssp HHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHH
T ss_pred HHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHH
Confidence 99999999885 699999999999999999999999999998876443
No 198
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.47 E-value=9.7e-07 Score=90.66 Aligned_cols=114 Identities=11% Similarity=0.019 Sum_probs=104.1
Q ss_pred hHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHcCCCCHH
Q 010705 380 TGAAAKNKGVDNQKAG-QYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEV-G-EYKKAVADCSKVLEQDDTNVS 456 (503)
Q Consensus 380 ~A~alk~lGn~~fkqG-DY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrL-G-dyeeALedaekALkLdPd~~k 456 (503)
...++..++.++...+ ++++++++++++|++ .|....+|+.|..|+.++ + +++++++.++++|+++|++..
T Consensus 87 ~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~------nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~ 160 (349)
T 3q7a_A 87 HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQ------NLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYH 160 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHT------TCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHH
T ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHH
Confidence 5778999999999999 599999999999987 567789999999999998 8 999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHH--------HHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 457 VLVQRALLYESMEKYK--------LGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 457 AlyrlA~Ay~~LGdye--------eAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
+|+.++.++..+++++ ++++.++++++++|.|-.+......+.
T Consensus 161 AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL 211 (349)
T 3q7a_A 161 TWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLR 211 (349)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 9999999999999988 999999999999999988766666554
No 199
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.46 E-value=3.6e-07 Score=91.35 Aligned_cols=112 Identities=13% Similarity=0.082 Sum_probs=90.6
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC--HHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN--VSV 457 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~--~kA 457 (503)
..+....++..+...|+|++|++.|..++.. .|... +++.++.++++.+++++|+..+++++...+.. ..+
T Consensus 101 r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~------~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a 173 (282)
T 4f3v_A 101 PLAITMGFAACEAAQGNYADAMEALEAAPVA------GSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAA 173 (282)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTSSCCT------TCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHH
T ss_pred HhHHHHHHHHHHHHCCCHHHHHHHHHHHHhc------CCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHH
Confidence 4566777899999999999999999988754 46666 88999999999999999999999887764221 458
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHH
Q 010705 458 LVQRALLYESMEKYKLGAEDLRTVLKID--PS-NRIARSTIHRL 498 (503)
Q Consensus 458 lyrlA~Ay~~LGdyeeAle~LqkALkLD--Pe-n~eAk~~La~L 498 (503)
+|.+|.+|..+|++++|+++|++++... |. ..++...+..+
T Consensus 174 ~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~gla 217 (282)
T 4f3v_A 174 GVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMA 217 (282)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHH
Confidence 9999999999999999999999998654 54 33444444333
No 200
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.43 E-value=9.3e-07 Score=91.03 Aligned_cols=106 Identities=18% Similarity=0.059 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHcCCCCH
Q 010705 383 AAKNKGVDNQKAG---QYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEV----GEYKKAVADCSKVLEQDDTNV 455 (503)
Q Consensus 383 alk~lGn~~fkqG---DY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrL----GdyeeALedaekALkLdPd~~ 455 (503)
++..+|.++.+.+ ++++|+++|+++++. .+..+..+++++.+|... +++++|+++|++++ |.++
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~------g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~ 248 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSR------GTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYP 248 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT------TCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGST
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHC------CCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCH
Confidence 7788999999999 999999999999876 344566667778777655 67788888888776 6777
Q ss_pred HHHHHHHHH-H--HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 456 SVLVQRALL-Y--ESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 456 kAlyrlA~A-y--~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
.+++++|.+ | ...+++++|+++|+++++.. +..+...|..+.
T Consensus 249 ~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y 293 (452)
T 3e4b_A 249 ASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGKLY 293 (452)
T ss_dssp HHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHH
Confidence 778888777 3 45677777887777777543 666666666554
No 201
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.41 E-value=3.9e-06 Score=87.13 Aligned_cols=103 Identities=13% Similarity=0.041 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHhcCCChhhHHHHH-------------------------------
Q 010705 380 TGAAAKNKGVDNQKAGQ---YADAIKWLSWAVILLEKSGDMATMMEVLS------------------------------- 425 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGD---Y~eAIk~YeKALeL~pk~~ddpd~A~ays------------------------------- 425 (503)
.+-.++.+|..++.+.+ +.+|+.+|++|++++| +++.+|.
T Consensus 195 ~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP------~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~ 268 (372)
T 3ly7_A 195 ALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSP------EFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIV 268 (372)
T ss_dssp GGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHH
Confidence 45667788888877654 6889999999999944 4344433
Q ss_pred -------------HHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 010705 426 -------------TRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNR 489 (503)
Q Consensus 426 -------------NrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~ 489 (503)
-++.+++..|++++|++.+++++.++|. ..+|..+|.++...|++++|++.|++|++++|...
T Consensus 269 a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 269 TLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp TCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred hcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 3444555689999999999999999975 56888999999999999999999999999999765
No 202
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.39 E-value=1.7e-06 Score=75.12 Aligned_cols=93 Identities=13% Similarity=-0.040 Sum_probs=79.7
Q ss_pred hCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH----cC
Q 010705 394 AGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYES----ME 469 (503)
Q Consensus 394 qGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~----LG 469 (503)
.+|+++|+++|++|.+.. +..++ ++.+|.....+++|+++|+++.++ .++.+++++|.+|.. .+
T Consensus 8 ~~d~~~A~~~~~~aa~~g--------~~~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~ 75 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELN--------EMFGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKK 75 (138)
T ss_dssp HHHHHHHHHHHHHHHHTT--------CTTHH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCC
T ss_pred ccCHHHHHHHHHHHHcCC--------CHhhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCc
Confidence 467999999999999761 12333 999999999999999999999998 689999999999999 89
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 470 KYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 470 dyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
++++|+++|+++.++ .+..+...|..+..
T Consensus 76 d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~ 104 (138)
T 1klx_A 76 DLRKAAQYYSKACGL--NDQDGCLILGYKQY 104 (138)
T ss_dssp CHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcC--CCHHHHHHHHHHHH
Confidence 999999999999987 57777777776653
No 203
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.30 E-value=2.8e-06 Score=87.47 Aligned_cols=105 Identities=16% Similarity=0.068 Sum_probs=71.5
Q ss_pred hHHHHHHHHHH-H--HHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHcC
Q 010705 380 TGAAAKNKGVD-N--QKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVG-----EYKKAVADCSKVLEQD 451 (503)
Q Consensus 380 ~A~alk~lGn~-~--fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLG-----dyeeALedaekALkLd 451 (503)
.+.+++.+|.. + ...+++++|+++|++|++. .+..+++++|.+|. .| ++++|+++|++++
T Consensus 247 ~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--------g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa--- 314 (452)
T 3e4b_A 247 YPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--------DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV--- 314 (452)
T ss_dssp STHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---
T ss_pred CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--------CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---
Confidence 35566677776 3 3567777788887777754 24667777777776 44 7788888887777
Q ss_pred CCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010705 452 DTNVSVLVQRALLYES----MEKYKLGAEDLRTVLKIDPSNRIARSTIHRL 498 (503)
Q Consensus 452 Pd~~kAlyrlA~Ay~~----LGdyeeAle~LqkALkLDPen~eAk~~La~L 498 (503)
+.++.+++++|.+|.. .+++++|+++|+++.+. .+..+...|..+
T Consensus 315 ~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~ 363 (452)
T 3e4b_A 315 GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARN--GQNSADFAIAQL 363 (452)
T ss_dssp TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT--TCTTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh--ChHHHHHHHHHH
Confidence 6777788888877766 44777788888777664 344444444444
No 204
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.25 E-value=5.6e-06 Score=74.07 Aligned_cols=105 Identities=11% Similarity=0.071 Sum_probs=84.8
Q ss_pred HHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHH---HHHHHHHHHHcC-C-CCHHHHHHHHHHHH
Q 010705 392 QKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKK---AVADCSKVLEQD-D-TNVSVLVQRALLYE 466 (503)
Q Consensus 392 fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyee---ALedaekALkLd-P-d~~kAlyrlA~Ay~ 466 (503)
....+...+.+.|.+++.. ......+.+++|.|+.+..+..+ +|..++..++.+ | ..-+.+|.+|..++
T Consensus 12 ~~~~~l~~~~~~y~~e~~~------~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~y 85 (126)
T 1nzn_A 12 VSVEDLLKFEKKFQSEKAA------GSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNY 85 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHH------SCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc------CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Confidence 3444555666777777654 23456788999999999887766 899998888876 4 46779999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhhh
Q 010705 467 SMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKMV 502 (503)
Q Consensus 467 ~LGdyeeAle~LqkALkLDPen~eAk~~La~LqklL 502 (503)
++|+|++|+++++.+|+++|+|.++......+++.+
T Consensus 86 klg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i 121 (126)
T 1nzn_A 86 RLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAM 121 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999988887776653
No 205
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.15 E-value=9e-06 Score=82.25 Aligned_cols=105 Identities=17% Similarity=0.045 Sum_probs=86.5
Q ss_pred chHHHHHHHHHHHHH---h--C------CHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHc-----CCHHHHHH
Q 010705 379 VTGAAAKNKGVDNQK---A--G------QYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEV-----GEYKKAVA 442 (503)
Q Consensus 379 ~~A~alk~lGn~~fk---q--G------DY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrL-----GdyeeALe 442 (503)
..+..++-.|..... . + ...+|...+++||+++|+ ..+..+|.-+|.+|.++ |+.++|.+
T Consensus 150 ~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~----~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~ 225 (301)
T 3u64_A 150 VDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPS----YQEGAVWNVLTKFYAAAPESFGGGMEKAHT 225 (301)
T ss_dssp GGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTT----HHHHHHHHHHHHHHHHSCTTTTCCHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCC----cccCHHHHHHHHHHHhCCCccCCCHHHHHH
Confidence 356666666655433 1 3 367889999999999432 22667999999999995 99999999
Q ss_pred HHHHHHHcCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCC
Q 010705 443 DCSKVLEQDDTN-VSVLVQRALLYES-MEKYKLGAEDLRTVLKIDPS 487 (503)
Q Consensus 443 daekALkLdPd~-~kAlyrlA~Ay~~-LGdyeeAle~LqkALkLDPe 487 (503)
+|+++|+++|+. +.++|..|..|+. .+++++|.++|+++|+++|.
T Consensus 226 ~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 226 AFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 999999999975 9999999999988 49999999999999998876
No 206
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.11 E-value=3.1e-05 Score=72.39 Aligned_cols=119 Identities=17% Similarity=0.122 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC---ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC---CCC
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGD---MATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQD---DTN 454 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~d---dpd~A~aysNrAlcylrLGdyeeALedaekALkLd---Pd~ 454 (503)
..+++.....++..+.|+.|+-.+..++.+.+.+++ ....++++..+|..++..++|.+|+..|+++|.+. ++.
T Consensus 20 ~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~ 99 (167)
T 3ffl_A 20 HMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKT 99 (167)
T ss_dssp -CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 346788889999999999999999999998765443 23467788999999999999999999999997653 111
Q ss_pred ----------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 455 ----------------------VSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 455 ----------------------~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
.+..|+++.||..++++++|+..++.+ -..-..+.+-..|.++.+
T Consensus 100 ~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I-p~k~Rt~kvnm~LakLy~ 166 (167)
T 3ffl_A 100 SKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI-PSRQRTPKINMLLANLYK 166 (167)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS-CGGGCCHHHHHHHHHHCC
T ss_pred CCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC-CchhcCHHHHHHHHHHhc
Confidence 268899999999999999999998753 112245677777777653
No 207
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.07 E-value=1.6e-05 Score=82.93 Aligned_cols=93 Identities=5% Similarity=-0.067 Sum_probs=76.6
Q ss_pred CCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh--cCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc---
Q 010705 376 PAGVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEK--SGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ--- 450 (503)
Q Consensus 376 ~~~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk--~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkL--- 450 (503)
.....+..+.+++.+|..+|+|++|+++|+++|++..+ -++.|..+..++|+|.+|..+|+|++|+..+++|+++
T Consensus 324 ~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 324 INIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp TSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 34457888999999999999999999999999998776 3457889999999999999999999999999999976
Q ss_pred --CCCCHH---HHHHHHHHHHHc
Q 010705 451 --DDTNVS---VLVQRALLYESM 468 (503)
Q Consensus 451 --dPd~~k---AlyrlA~Ay~~L 468 (503)
.|+++. .+.+++.++..+
T Consensus 404 ~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 404 THGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HTCTTSHHHHHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHH
Confidence 366643 445556655543
No 208
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.07 E-value=2.3e-05 Score=72.05 Aligned_cols=83 Identities=12% Similarity=0.003 Sum_probs=71.7
Q ss_pred hHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHhcCCCh-hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Q 010705 380 TGAAAKNKGVDNQKAG---QYADAIKWLSWAVILLEKSGDMA-TMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNV 455 (503)
Q Consensus 380 ~A~alk~lGn~~fkqG---DY~eAIk~YeKALeL~pk~~ddp-d~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~ 455 (503)
..++.+++|.++.+.. ++.+++.++++.++.. .| ...++++++|..|+++++|++|+++++++|+++|++.
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-----~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~ 105 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-----SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNN 105 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-----CHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-----CccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 5778999999999988 7889999999999862 14 5678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 010705 456 SVLVQRALLYES 467 (503)
Q Consensus 456 kAlyrlA~Ay~~ 467 (503)
++...+-.+-..
T Consensus 106 QA~~Lk~~ie~~ 117 (152)
T 1pc2_A 106 QAKELERLIDKA 117 (152)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 988776655433
No 209
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.05 E-value=4.2e-05 Score=77.45 Aligned_cols=117 Identities=9% Similarity=-0.044 Sum_probs=88.7
Q ss_pred cHHHhCCCCCCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHH
Q 010705 366 TTELEGLPPPPAGVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCS 445 (503)
Q Consensus 366 e~eLEaL~~~~~~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedae 445 (503)
...++.+...... ....+..+|.+++..|++++|+++|.+.|+..+ .....+++..++.|++++++.++|.+.++
T Consensus 86 ~~~l~~l~~~~~~-~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~----~~~~lea~~l~vqi~L~~~r~d~A~k~l~ 160 (310)
T 3mv2_B 86 IEELENLLKDKQN-SPYELYLLATAQAILGDLDKSLETCVEGIDNDE----AEGTTELLLLAIEVALLNNNVSTASTIFD 160 (310)
T ss_dssp CHHHHHTTTTSCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSC----STTHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHhcCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCC----CcCcHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 3445544433222 244557899999999999999999999975411 13678899999999999999999999999
Q ss_pred HHHHcCCC----CHHHHHHH--HHHHHHcC--CHHHHHHHHHHHHHhCCC
Q 010705 446 KVLEQDDT----NVSVLVQR--ALLYESME--KYKLGAEDLRTVLKIDPS 487 (503)
Q Consensus 446 kALkLdPd----~~kAlyrl--A~Ay~~LG--dyeeAle~LqkALkLDPe 487 (503)
+..+.+|+ .-..++.+ +-+.+..| ++++|+..|+++++..|+
T Consensus 161 ~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 161 NYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 99999983 22344444 44466556 999999999999988886
No 210
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.99 E-value=2.5e-05 Score=64.83 Aligned_cols=69 Identities=17% Similarity=0.053 Sum_probs=63.0
Q ss_pred hHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Q 010705 380 TGAAAKNKGVDNQKAGQ---YADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN 454 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGD---Y~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~ 454 (503)
.++.+..+|.+++..++ ..+|.+++++||++ +|....++..+|..+++.|+|++|+.+++++++.+|..
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQL------EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 57788999999987666 79999999999999 77788999999999999999999999999999999873
No 211
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.99 E-value=3e-05 Score=81.21 Aligned_cols=83 Identities=6% Similarity=-0.095 Sum_probs=71.9
Q ss_pred CCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh--cCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--
Q 010705 375 PPAGVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEK--SGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ-- 450 (503)
Q Consensus 375 ~~~~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk--~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkL-- 450 (503)
......+..+.++|.+|..+|+|++|+.+|+++|++..+ -++.|+.+..|+|+|.+|..+|+|++|+..|++|+++
T Consensus 334 ~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~ 413 (433)
T 3qww_A 334 DSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIME 413 (433)
T ss_dssp TTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 344457888999999999999999999999999998776 2457889999999999999999999999999999986
Q ss_pred ---CCCCHHH
Q 010705 451 ---DDTNVSV 457 (503)
Q Consensus 451 ---dPd~~kA 457 (503)
.|+++..
T Consensus 414 ~~lG~~Hp~~ 423 (433)
T 3qww_A 414 VAHGKDHPYI 423 (433)
T ss_dssp HHTCTTCHHH
T ss_pred HHcCCCChHH
Confidence 3666543
No 212
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.96 E-value=3.6e-05 Score=91.35 Aligned_cols=106 Identities=16% Similarity=0.116 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC--------
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDD-------- 452 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdP-------- 452 (503)
...+...|+.++..++|++|+.+|.+| ..|..++.||.++|++++|++.++++...+.
T Consensus 1195 ~ad~~~iGd~le~eg~YeeA~~~Y~kA--------------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~ac 1260 (1630)
T 1xi4_A 1195 NAHIQQVGDRCYDEKMYDAAKLLYNNV--------------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC 1260 (1630)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHhh--------------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 356778999999999999999999886 3788899999999999999999998854332
Q ss_pred -----------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 453 -----------------TNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 453 -----------------d~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
.+++.+..++..|..+|.|++|+..|+.+|.+++.+..+...|..+..
T Consensus 1261 ve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLya 1325 (1630)
T 1xi4_A 1261 VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYS 1325 (1630)
T ss_pred hhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHH
Confidence 133445567778999999999999999999999999888877776643
No 213
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.95 E-value=1.3e-05 Score=85.01 Aligned_cols=103 Identities=17% Similarity=0.120 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC---------
Q 010705 382 AAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDD--------- 452 (503)
Q Consensus 382 ~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdP--------- 452 (503)
..+..+|+.++..|+|++|+.+|.++ ..|..++.|+.++|+|++|++.++++. ++
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a--------------~n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~~Wk~v~~a 186 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV--------------SNFGRLASTLVHLGEYQAAVDGARKAN--STRTWKEVCFA 186 (449)
T ss_dssp --------------CTTTHHHHHHHT--------------TCHHHHHHHHHTTTCHHHHHHHHHHHT--CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh--------------hhHHHHHHHHHHhccHHHHHHHHHHcC--CchhHHHHHHH
Confidence 47888888888888888888888765 367788888888888888888888872 22
Q ss_pred ------------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 453 ------------------TNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 453 ------------------d~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
.+++-+..+..+|...|++++|+..|+++|.+++.+..+...|..+..
T Consensus 187 Cv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ 252 (449)
T 1b89_A 187 CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYS 252 (449)
T ss_dssp HHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHH
T ss_pred HHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 111122233478999999999999999999999999888888876643
No 214
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.92 E-value=0.0001 Score=74.65 Aligned_cols=114 Identities=8% Similarity=-0.184 Sum_probs=87.4
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChh----hHHHHHHHHHH--HHHcC--CHHHHHHHHHHHHHc
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMAT----MMEVLSTRASC--YKEVG--EYKKAVADCSKVLEQ 450 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd----~A~aysNrAlc--ylrLG--dyeeALedaekALkL 450 (503)
...+++.....++.+.++.+.|.+.+++..+. +++ +-.++.+++.. .+..| ++.+|+..|+++...
T Consensus 134 ~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~------~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~ 207 (310)
T 3mv2_B 134 GTTELLLLAIEVALLNNNVSTASTIFDNYTNA------IEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQT 207 (310)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------SCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc------CccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh
Confidence 36778888999999999999999999998877 331 23444555555 55556 899999999999888
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------CCCCHHHHHHHHHHH
Q 010705 451 DDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKI----------DPSNRIARSTIHRLT 499 (503)
Q Consensus 451 dPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkL----------DPen~eAk~~La~Lq 499 (503)
.|++......+. +++.+|++++|.+.++.++++ +|+++++...+..|.
T Consensus 208 ~p~~~~~~lLln-~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~ 265 (310)
T 3mv2_B 208 FPTWKTQLGLLN-LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLA 265 (310)
T ss_dssp SCSHHHHHHHHH-HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHH
T ss_pred CCCcccHHHHHH-HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHH
Confidence 887433333333 999999999999999988887 488888876654443
No 215
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.73 E-value=0.00049 Score=62.91 Aligned_cols=83 Identities=7% Similarity=0.085 Sum_probs=71.2
Q ss_pred hHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010705 420 MMEVLSTRASCYKEVGEY---KKAVADCSKVLEQDDT-NVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTI 495 (503)
Q Consensus 420 ~A~aysNrAlcylrLGdy---eeALedaekALkLdPd-~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~L 495 (503)
.....+++|.|+.+-.+- .+++..++..++..|. .-+.+|.+|..++++++|++|+++++.+|+++|+|.++....
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk 117 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 117 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 456788889999887764 5789999999998884 567999999999999999999999999999999999998887
Q ss_pred HHHHhhh
Q 010705 496 HRLTKMV 502 (503)
Q Consensus 496 a~LqklL 502 (503)
..+++.+
T Consensus 118 ~~Ie~~i 124 (144)
T 1y8m_A 118 SMVEDKI 124 (144)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776543
No 216
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.72 E-value=0.00021 Score=64.63 Aligned_cols=83 Identities=7% Similarity=0.085 Sum_probs=67.2
Q ss_pred hHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010705 420 MMEVLSTRASCYKEVGEY---KKAVADCSKVLEQDDT-NVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTI 495 (503)
Q Consensus 420 ~A~aysNrAlcylrLGdy---eeALedaekALkLdPd-~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~L 495 (503)
.....+++|.|+.+..+. .++|..++..++.+|. .-+.+|.+|..++++|+|++|+++++.+|+++|+|.++....
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 356777788888877654 5688888888888874 477899999999999999999999999999999999888777
Q ss_pred HHHHhhh
Q 010705 496 HRLTKMV 502 (503)
Q Consensus 496 a~LqklL 502 (503)
..+++.+
T Consensus 119 ~~Ie~ki 125 (134)
T 3o48_A 119 SMVEDKI 125 (134)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776543
No 217
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.57 E-value=0.00027 Score=84.09 Aligned_cols=92 Identities=13% Similarity=0.007 Sum_probs=77.4
Q ss_pred HHHHHHHhCCHHHHHHHHHHHH--------------------HHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 010705 387 KGVDNQKAGQYADAIKWLSWAV--------------------ILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSK 446 (503)
Q Consensus 387 lGn~~fkqGDY~eAIk~YeKAL--------------------eL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaek 446 (503)
.|.++...+.|++|.++|+++- ++.+ ..+...+|+++|.++...|++++|+..|.+
T Consensus 1055 IA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Ae----rvn~p~vWsqLAKAql~~G~~kEAIdsYiK 1130 (1630)
T 1xi4_A 1055 IANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAE----RCNEPAVWSQLAKAQLQKGMVKEAIDSYIK 1130 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHH----hcCCHHHHHHHHHHHHhCCCHHHHHHHHHh
Confidence 4888888888888887776643 2222 234567999999999999999999999977
Q ss_pred HHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 010705 447 VLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPS 487 (503)
Q Consensus 447 ALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPe 487 (503)
+ ++..+|++.+.++..+|+|++|+++|+.+.+..++
T Consensus 1131 A-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1131 A-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred c-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 6 78999999999999999999999999999998855
No 218
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.27 E-value=0.00099 Score=62.24 Aligned_cols=89 Identities=16% Similarity=0.128 Sum_probs=69.9
Q ss_pred CcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC-------------------ChhhHHHHHHHHHHHHHcCCH
Q 010705 377 AGVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGD-------------------MATMMEVLSTRASCYKEVGEY 437 (503)
Q Consensus 377 ~~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~d-------------------dpd~A~aysNrAlcylrLGdy 437 (503)
+..+++.+..+|+.+|.+++|..|+..|++||.+.....+ ...+.++.+.++.||.+++++
T Consensus 59 p~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~ 138 (167)
T 3ffl_A 59 PPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQD 138 (167)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCH
Confidence 3457888999999999999999999999999987653221 233568999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 010705 438 KKAVADCSKVLEQDDTNVSVLVQRALLYE 466 (503)
Q Consensus 438 eeALedaekALkLdPd~~kAlyrlA~Ay~ 466 (503)
++|+..++..-. .-..++..+.+|..|.
T Consensus 139 ~~Ai~~Le~Ip~-k~Rt~kvnm~LakLy~ 166 (167)
T 3ffl_A 139 KDAIAILDGIPS-RQRTPKINMLLANLYK 166 (167)
T ss_dssp HHHHHHHHTSCG-GGCCHHHHHHHHHHCC
T ss_pred HHHHHHHhcCCc-hhcCHHHHHHHHHHhc
Confidence 999999866432 2356888888887663
No 219
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.15 E-value=0.0051 Score=57.07 Aligned_cols=113 Identities=13% Similarity=-0.047 Sum_probs=95.3
Q ss_pred hHHHHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHh--cCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Q 010705 380 TGAAAKNKGVDNQKAGQY------ADAIKWLSWAVILLEK--SGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQD 451 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY------~eAIk~YeKALeL~pk--~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLd 451 (503)
..+.+........+.|+. ++-++.|++|+...|- ...-..++.+|...|.. ..+++.++|.+.|+.|+.++
T Consensus 12 ~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~h 90 (161)
T 4h7y_A 12 NPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANC 90 (161)
T ss_dssp SHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHh
Confidence 467788888888888888 8888999999987653 22234677888888755 68899999999999999998
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 010705 452 DTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARS 493 (503)
Q Consensus 452 Pd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~ 493 (503)
...++.|+..|.--...++.++|...+.+++-+.|...+...
T Consensus 91 KkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~le 132 (161)
T 4h7y_A 91 KKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEMLE 132 (161)
T ss_dssp TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHHH
Confidence 888999999999999999999999999999999998866543
No 220
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.07 E-value=0.0029 Score=56.47 Aligned_cols=81 Identities=14% Similarity=0.016 Sum_probs=65.9
Q ss_pred hHHHHHHHHHHHHHhCCHHH---HHHHHHHHHHHHHhcCCCh-hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Q 010705 380 TGAAAKNKGVDNQKAGQYAD---AIKWLSWAVILLEKSGDMA-TMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNV 455 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~e---AIk~YeKALeL~pk~~ddp-d~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~ 455 (503)
..++.++.+..+.+..+-.+ +|.+++..+.- ..| ..-++++.+|..++++|+|++|+++++.+|+++|+|.
T Consensus 34 s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~-----~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~ 108 (126)
T 1nzn_A 34 SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPK-----GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNN 108 (126)
T ss_dssp CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTT-----SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-----CCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCH
Confidence 46778888999988887666 88888876643 113 5678888999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 010705 456 SVLVQRALLY 465 (503)
Q Consensus 456 kAlyrlA~Ay 465 (503)
+|.-.+..+-
T Consensus 109 QA~~Lk~~i~ 118 (126)
T 1nzn_A 109 QAKELERLID 118 (126)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8877665554
No 221
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.96 E-value=0.011 Score=60.63 Aligned_cols=102 Identities=18% Similarity=0.153 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh-----cCCC-----------hhhHHHHHHHHHHHHHcCCHHHHHHHHH
Q 010705 382 AAAKNKGVDNQKAGQYADAIKWLSWAVILLEK-----SGDM-----------ATMMEVLSTRASCYKEVGEYKKAVADCS 445 (503)
Q Consensus 382 ~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk-----~~dd-----------pd~A~aysNrAlcylrLGdyeeALedae 445 (503)
..+...+......++..+|++.|.+|+.+-.- .... .....++..++.+++.+|++++|+..++
T Consensus 116 ~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~ 195 (388)
T 2ff4_A 116 VAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELE 195 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 34445566666789999999999999976321 1000 1223455667888999999999999999
Q ss_pred HHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 446 KVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLK 483 (503)
Q Consensus 446 kALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALk 483 (503)
+++..+|.+-.+|..+-.+|+..|+..+|++.|+++-+
T Consensus 196 ~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 196 ALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888654
No 222
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=96.90 E-value=0.0072 Score=61.18 Aligned_cols=79 Identities=9% Similarity=-0.032 Sum_probs=61.5
Q ss_pred hhhHHHHHHHHHHHHH---c--C------CHHHHHHHHHHHHHcCCCC--HHHHHHHHHHHHHc-----CCHHHHHHHHH
Q 010705 418 ATMMEVLSTRASCYKE---V--G------EYKKAVADCSKVLEQDDTN--VSVLVQRALLYESM-----EKYKLGAEDLR 479 (503)
Q Consensus 418 pd~A~aysNrAlcylr---L--G------dyeeALedaekALkLdPd~--~kAlyrlA~Ay~~L-----GdyeeAle~Lq 479 (503)
+.++++++=.|.++.. . + ...+|...++++|++||+. ..+|..+|.+|..+ |+.++|.++|+
T Consensus 149 ~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~fe 228 (301)
T 3u64_A 149 RVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFE 228 (301)
T ss_dssp GGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHH
Confidence 4566666666666533 2 2 2688999999999999995 55999999999996 99999999999
Q ss_pred HHHHhCCCC-HHHHHHHH
Q 010705 480 TVLKIDPSN-RIARSTIH 496 (503)
Q Consensus 480 kALkLDPen-~eAk~~La 496 (503)
++|+|+|+. ..+.....
T Consensus 229 rAL~LnP~~~id~~v~YA 246 (301)
T 3u64_A 229 HLTRYCSAHDPDHHITYA 246 (301)
T ss_dssp HHHHHCCTTCSHHHHHHH
T ss_pred HHHHhCCCCCchHHHHHH
Confidence 999999965 44444433
No 223
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=96.87 E-value=0.0089 Score=62.34 Aligned_cols=100 Identities=14% Similarity=0.062 Sum_probs=84.0
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC---CCCH--H--HH
Q 010705 386 NKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQD---DTNV--S--VL 458 (503)
Q Consensus 386 ~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLd---Pd~~--k--Al 458 (503)
.++..|+..++|.+|++.+.+.++-+.+..+.....+++.....+|..++++.++...+++|.... +.++ . ..
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 679999999999999999999999887766567788999999999999999999999999997653 1222 3 34
Q ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHHhC
Q 010705 459 VQRALLYE-SMEKYKLGAEDLRTVLKID 485 (503)
Q Consensus 459 yrlA~Ay~-~LGdyeeAle~LqkALkLD 485 (503)
..-|.+++ ..++|++|..+|.++++-.
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~~f 211 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFEGF 211 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHhcc
Confidence 44588899 8999999999999998643
No 224
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.86 E-value=0.013 Score=52.88 Aligned_cols=83 Identities=17% Similarity=0.059 Sum_probs=67.1
Q ss_pred hHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Q 010705 380 TGAAAKNKGVDNQKAGQY---ADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVS 456 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY---~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~k 456 (503)
..+..++.+..+.+..+- .++|++++..++.. ....-++++.+|..++++|+|++|+++++.+|+++|++.+
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~-----~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~Q 113 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEA-----ESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQ 113 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHC-----GGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-----cchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHH
Confidence 567888899888887754 56888888877641 1245788888999999999999999999999999999998
Q ss_pred HHHHHHHHHHH
Q 010705 457 VLVQRALLYES 467 (503)
Q Consensus 457 AlyrlA~Ay~~ 467 (503)
|.-.+..+-..
T Consensus 114 A~~Lk~~Ie~k 124 (134)
T 3o48_A 114 VGALKSMVEDK 124 (134)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 87766655443
No 225
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=96.80 E-value=0.0027 Score=65.91 Aligned_cols=75 Identities=9% Similarity=0.013 Sum_probs=63.3
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLV 459 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAly 459 (503)
.+.++..++..++..|++++|++.+++|+++ ++ ....|..+|.++...|++++|++.|++|+.++|.....++
T Consensus 276 ~a~~~~alal~~l~~gd~d~A~~~l~rAl~L------n~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~ 348 (372)
T 3ly7_A 276 LSIIYQIKAVSALVKGKTDESYQAINTGIDL------EM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYW 348 (372)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhc------CC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHH
Confidence 4667777888888899999999999999999 33 3567788999999999999999999999999997764433
Q ss_pred HH
Q 010705 460 QR 461 (503)
Q Consensus 460 rl 461 (503)
..
T Consensus 349 ~~ 350 (372)
T 3ly7_A 349 IE 350 (372)
T ss_dssp HH
T ss_pred Hh
Confidence 33
No 226
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.71 E-value=0.018 Score=52.67 Aligned_cols=81 Identities=17% Similarity=0.064 Sum_probs=65.7
Q ss_pred hHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Q 010705 380 TGAAAKNKGVDNQKAGQY---ADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVS 456 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY---~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~k 456 (503)
..+..++.+..+.+..+- .++|.+++..+.- .+ ...-++++.+|..++++++|++|+++++.+|+++|+|.+
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~---~~--~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~Q 112 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE---AE--SRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQ 112 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHH---CC--STHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc---Cc--cchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHH
Confidence 577889999999988764 4688888887753 11 245678888999999999999999999999999999988
Q ss_pred HHHHHHHHH
Q 010705 457 VLVQRALLY 465 (503)
Q Consensus 457 AlyrlA~Ay 465 (503)
|.-.+..+-
T Consensus 113 A~~Lk~~Ie 121 (144)
T 1y8m_A 113 VGALKSMVE 121 (144)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 876665544
No 227
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.63 E-value=0.015 Score=64.22 Aligned_cols=118 Identities=8% Similarity=-0.037 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh--------cCCC--------hhhHHHHHHHHHHHHHcCCHHHHHHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEK--------SGDM--------ATMMEVLSTRASCYKEVGEYKKAVADC 444 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk--------~~dd--------pd~A~aysNrAlcylrLGdyeeALeda 444 (503)
...+...+....+.+++++|.+.|+++++.++. .+.. .....+|...+.+..+.++.+.|.+.+
T Consensus 378 ~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf 457 (679)
T 4e6h_A 378 AVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIF 457 (679)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 445666777778888899999999998876421 1100 024457888888888888889999999
Q ss_pred HHHHHc-CCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010705 445 SKVLEQ-DDTNVSVLVQRALLYESME-KYKLGAEDLRTVLKIDPSNRIARSTIHRL 498 (503)
Q Consensus 445 ekALkL-dPd~~kAlyrlA~Ay~~LG-dyeeAle~LqkALkLDPen~eAk~~La~L 498 (503)
.+|++. .+...+.|...+.+...++ +++.|...|+++|+..|.+........++
T Consensus 458 ~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~f 513 (679)
T 4e6h_A 458 GKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDF 513 (679)
T ss_dssp HHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHH
Confidence 999887 4444566666666666654 48899999999999888887765444443
No 228
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.58 E-value=0.0024 Score=67.83 Aligned_cols=104 Identities=13% Similarity=0.187 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHH---------hcCC----------ChhhHHHHHHHHHHHHHcCCHHHHHHH
Q 010705 383 AAKNKGVDNQKAGQYADAIKWLSWAVILLE---------KSGD----------MATMMEVLSTRASCYKEVGEYKKAVAD 443 (503)
Q Consensus 383 alk~lGn~~fkqGDY~eAIk~YeKALeL~p---------k~~d----------dpd~A~aysNrAlcylrLGdyeeALed 443 (503)
.+..++.++++.|+|++|++.|.+|..... ..++ --..+.-+..+..+|.+.|++++|+..
T Consensus 150 n~~~LA~~L~~Lg~yq~AVea~~KA~~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~l 229 (449)
T 1b89_A 150 NFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITM 229 (449)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hHHHHHHHHHHhccHHHHHHHHHHcCCchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHH
Confidence 467889999999999999999999853200 0000 001111233456889999999999999
Q ss_pred HHHHHHcCCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHhCC
Q 010705 444 CSKVLEQDDTNVSVLVQRALLYESM--EKYKLGAEDLRTVLKIDP 486 (503)
Q Consensus 444 aekALkLdPd~~kAlyrlA~Ay~~L--GdyeeAle~LqkALkLDP 486 (503)
+++++.+++.+..++..++.+|.+- ++..+.++.|.+.+.+.|
T Consensus 230 Le~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k 274 (449)
T 1b89_A 230 LEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPK 274 (449)
T ss_dssp HHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHH
T ss_pred HHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcH
Confidence 9999999999999999998888654 455566666655444433
No 229
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.41 E-value=0.019 Score=63.42 Aligned_cols=99 Identities=8% Similarity=0.005 Sum_probs=84.7
Q ss_pred hHHHHHHHHHHHHHhCCHHHHH-HHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------
Q 010705 380 TGAAAKNKGVDNQKAGQYADAI-KWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ-------- 450 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAI-k~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkL-------- 450 (503)
....|...+..+...++.++|+ +.|++|+..+ |....+|..++.+..+.+++++|.+.|++++..
T Consensus 342 ~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~------P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~ 415 (679)
T 4e6h_A 342 APEIWFNMANYQGEKNTDSTVITKYLKLGQQCI------PNSAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAAL 415 (679)
T ss_dssp CHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhh
Confidence 4678888899899999999997 9999999874 345678899999999999999999999999975
Q ss_pred ---CCC-----------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 010705 451 ---DDT-----------NVSVLVQRALLYESMEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 451 ---dPd-----------~~kAlyrlA~Ay~~LGdyeeAle~LqkALkL 484 (503)
.|. ...+|...+......++.+.|...|.+|++.
T Consensus 416 ~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~ 463 (679)
T 4e6h_A 416 MEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL 463 (679)
T ss_dssp HHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred hhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 243 3457888888888899999999999999987
No 230
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.22 E-value=0.031 Score=57.99 Aligned_cols=104 Identities=14% Similarity=-0.035 Sum_probs=84.7
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc---CCCC--
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ---DDTN-- 454 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkL---dPd~-- 454 (503)
...++..+|..|++.||+.+|++.|.++.+.+.. ......++.....+++..+++..+..+++++..+ .+++
T Consensus 130 ~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~---~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~ 206 (429)
T 4b4t_R 130 QAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAIS---TGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWER 206 (429)
T ss_dssp CSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTC---CCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC---hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHH
Confidence 3456788999999999999999999999887543 3456788888999999999999999999998765 2333
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 010705 455 -VSVLVQRALLYESMEKYKLGAEDLRTVLKIDP 486 (503)
Q Consensus 455 -~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDP 486 (503)
.+..+..|.++...++|.+|...|.+++.-..
T Consensus 207 ~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 207 RNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 23445568888999999999999999887644
No 231
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.15 E-value=0.022 Score=64.08 Aligned_cols=86 Identities=15% Similarity=0.089 Sum_probs=66.8
Q ss_pred CHHHHHHHHHHHHHHHH----hcC-CC-------hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 010705 396 QYADAIKWLSWAVILLE----KSG-DM-------ATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRAL 463 (503)
Q Consensus 396 DY~eAIk~YeKALeL~p----k~~-dd-------pd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~ 463 (503)
+--+|+....++++-.. ... .+ +....++..-+..++..++|+-|++.+++|+.+.|...+.|++|+.
T Consensus 300 ~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~ 379 (754)
T 4gns_B 300 KELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLAR 379 (754)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHH
Confidence 45568888777774211 111 01 1234466667888889999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHH
Q 010705 464 LYESMEKYKLGAEDLRTV 481 (503)
Q Consensus 464 Ay~~LGdyeeAle~LqkA 481 (503)
||..+++|+.|+-.+...
T Consensus 380 vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 380 CHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHTTCHHHHHHHHHHS
T ss_pred HHHHhccHHHHHHHHhcC
Confidence 999999999999887654
No 232
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.92 E-value=0.11 Score=54.37 Aligned_cols=105 Identities=13% Similarity=0.108 Sum_probs=82.8
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---cCCCC--
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLE---QDDTN-- 454 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALk---LdPd~-- 454 (503)
++.....++..++..|+|.+|.+.+.....-.....+.....+++.....+|+..+++.+|...++++.. -.+..
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~ 215 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYES 215 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHH
Confidence 6677788999999999999999999987643322333455678888999999999999999999998753 12233
Q ss_pred HH--HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 010705 455 VS--VLVQRALLYESMEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 455 ~k--AlyrlA~Ay~~LGdyeeAle~LqkALkL 484 (503)
.+ .+...|..+...++|.+|..+|.++++.
T Consensus 216 lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 216 LKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 23 4445689999999999999999999875
No 233
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.43 E-value=0.23 Score=47.44 Aligned_cols=99 Identities=15% Similarity=0.105 Sum_probs=74.8
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHH--Hc-------------
Q 010705 386 NKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVL--EQ------------- 450 (503)
Q Consensus 386 ~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekAL--kL------------- 450 (503)
.++..++-.|+|..|+-.+.+. ..++..+-.++||.++++|.+|+..++..| +.
T Consensus 38 L~~I~LyyngEY~R~Lf~L~~l-----------NT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~f 106 (242)
T 3kae_A 38 LMSIVLYLNGEYTRALFHLHKL-----------NTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEM 106 (242)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTC-----------CBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTT
T ss_pred hhhhhhhhcchHhHHHHHHHhc-----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccccccccee
Confidence 4577778888877776655331 235566667899999999999999999999 32
Q ss_pred --CCCCHHHHHH-HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 010705 451 --DDTNVSVLVQ-RALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTI 495 (503)
Q Consensus 451 --dPd~~kAlyr-lA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~L 495 (503)
+|.+-+..+. +|.++..+++.+||+.+|..-..++|-...++..+
T Consensus 107 fvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~vEnli 154 (242)
T 3kae_A 107 FVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPVENLL 154 (242)
T ss_dssp SCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred eeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchHHHHH
Confidence 2445555444 59999999999999999999999998766655443
No 234
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=95.38 E-value=0.21 Score=52.76 Aligned_cols=99 Identities=10% Similarity=-0.002 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-CCHHHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDD-TNVSVLV 459 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdP-d~~kAly 459 (503)
...|..+-..|.+.|++++|+++|++..+. +-.| +...|..+-..|.+.|+.++|++.+++.++..- -+...|.
T Consensus 105 ~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~----g~~P-d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~ 179 (501)
T 4g26_A 105 EATFTNGARLAVAKDDPEMAFDMVKQMKAF----GIQP-RLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELA 179 (501)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT----TCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCC-ccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 556777888999999999999999987643 2233 356778788889999999999999999887642 2566788
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh
Q 010705 460 QRALLYESMEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 460 rlA~Ay~~LGdyeeAle~LqkALkL 484 (503)
.+-.+|...|++++|++.|+++.+.
T Consensus 180 ~Li~~~~~~g~~d~A~~ll~~Mr~~ 204 (501)
T 4g26_A 180 ALLKVSMDTKNADKVYKTLQRLRDL 204 (501)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHHh
Confidence 8899999999999999999998765
No 235
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.36 E-value=0.27 Score=51.56 Aligned_cols=110 Identities=7% Similarity=-0.089 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC----------------------------------ChhhHHHHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGD----------------------------------MATMMEVLST 426 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~d----------------------------------dpd~A~aysN 426 (503)
...+...+..+...++.++|.+.|++|+.. |.... ......+|..
T Consensus 213 ~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~ 291 (493)
T 2uy1_A 213 EEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRIN 291 (493)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHH
Confidence 667888888889999999999999999987 54210 0011134555
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHH
Q 010705 427 RASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESME-KYKLGAEDLRTVLKIDPSNRIAR 492 (503)
Q Consensus 427 rAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LG-dyeeAle~LqkALkLDPen~eAk 492 (503)
.+..+.+.++.++|.+.|++| +..+.....+...|.+.+.++ +++.|...|+++++..|+.++..
T Consensus 292 y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~ 357 (493)
T 2uy1_A 292 HLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLK 357 (493)
T ss_dssp HHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHH
Confidence 555566678899999999999 433345566766677666666 69999999999999999887653
No 236
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=94.68 E-value=0.67 Score=48.90 Aligned_cols=64 Identities=5% Similarity=-0.097 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 010705 421 MEVLSTRASCYKEVGEYKKAVADCSKVLEQD-DTNVSVLVQRALLYESMEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 421 A~aysNrAlcylrLGdyeeALedaekALkLd-Pd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkL 484 (503)
...|..+-.+|.+.|++++|++.+++..+.. .-+...|..+-.+|...|++++|++.|+++.+.
T Consensus 105 ~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~ 169 (501)
T 4g26_A 105 EATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVES 169 (501)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 4567777788889999999999999887764 225667777788889999999999999988775
No 237
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.55 E-value=0.076 Score=59.69 Aligned_cols=61 Identities=18% Similarity=0.092 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010705 382 AAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVL 448 (503)
Q Consensus 382 ~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekAL 448 (503)
..+..++..+..+++|+.|+++-++|+.+ .|.....|+.|+.||.++++|+.||-.++-|-
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~------aPseF~tW~~La~vYi~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTEL------ALDSFESWYNLARCHIKKEEYEKALFAINSMP 398 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhc------CchhhHHHHHHHHHHHHhccHHHHHHHHhcCC
Confidence 35666788889999999999999999999 67789999999999999999999999998884
No 238
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.49 E-value=0.12 Score=51.56 Aligned_cols=64 Identities=14% Similarity=0.094 Sum_probs=47.0
Q ss_pred HHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 010705 431 YKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARST 494 (503)
Q Consensus 431 ylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~ 494 (503)
+++.+++++|++.++..++.+|.+.+....+-+.|+..|+|+.|...++.+.+++|+.......
T Consensus 7 ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~ 70 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQ 70 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHH
Confidence 4566777777777777777777777777777777777777777777777777777776544333
No 239
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.21 E-value=0.44 Score=50.62 Aligned_cols=48 Identities=15% Similarity=0.003 Sum_probs=29.7
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 010705 389 VDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKV 447 (503)
Q Consensus 389 n~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekA 447 (503)
..+...+++++|++++++. .....|.++|..+++.++++.|++.|.++
T Consensus 660 ~~~l~~~~~~~A~~~~~~~-----------~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 660 ELALKVGQLTLARDLLTDE-----------SAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHTCHHHHHHHHTTC-----------CCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ehhhhcCCHHHHHHHHHhh-----------CcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 3445666666666654221 22357777777777777777777777664
No 240
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.04 E-value=0.36 Score=48.23 Aligned_cols=62 Identities=13% Similarity=0.077 Sum_probs=54.6
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Q 010705 389 VDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVS 456 (503)
Q Consensus 389 n~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~k 456 (503)
..+++.++..+|++.....|+. .|.++.....+-..++-.|++++|++.++.+.+++|....
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~------~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKA------SPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHT------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHh------CCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 3567899999999999999876 6777888888889999999999999999999999998754
No 241
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=93.93 E-value=0.44 Score=49.99 Aligned_cols=93 Identities=10% Similarity=-0.192 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHcCCCCHHHHHH
Q 010705 382 AAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVG-EYKKAVADCSKVLEQDDTNVSVLVQ 460 (503)
Q Consensus 382 ~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLG-dyeeALedaekALkLdPd~~kAlyr 460 (503)
..+........+.++.+.|.+.|.+| .. + .....+|...+.+.+..+ +.+.|...++++++..|+.+..+..
T Consensus 287 ~lw~~y~~~~~r~~~~~~AR~i~~~A-~~-~-----~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~ 359 (493)
T 2uy1_A 287 LLRINHLNYVLKKRGLELFRKLFIEL-GN-E-----GVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEE 359 (493)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHH-TT-S-----CCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh-hC-C-----CCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHH
Confidence 45666677777788899999999999 32 1 123457776777666666 6999999999999999999888888
Q ss_pred HHHHHHHcCCHHHHHHHHHHH
Q 010705 461 RALLYESMEKYKLGAEDLRTV 481 (503)
Q Consensus 461 lA~Ay~~LGdyeeAle~LqkA 481 (503)
.+..+..+++.+.|...|+++
T Consensus 360 yid~e~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 360 FFLFLLRIGDEENARALFKRL 380 (493)
T ss_dssp HHHHHHHHTCHHHHHHHHHHS
T ss_pred HHHHHHHcCCHHHHHHHHHHH
Confidence 888888999999999888776
No 242
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.48 E-value=0.33 Score=51.94 Aligned_cols=78 Identities=10% Similarity=-0.052 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Q 010705 423 VLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTK 500 (503)
Q Consensus 423 aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqk 500 (503)
++..+|.+......++.|..+|++|+.+.|.....|..+|.++...++.-+|+-+|.++|......+.+...|..+.+
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 456678888888888999999999999999999999999999999999999999999999887778888777776654
No 243
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=92.55 E-value=0.39 Score=48.98 Aligned_cols=64 Identities=13% Similarity=0.027 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLE 449 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALk 449 (503)
...++..+...+...|++.+|+..+.+++.. +|.+-.+|..+..+|++.|+..+|++.|+++.+
T Consensus 170 ~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~------~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 170 KVLAHTAKAEAEIACGRASAVIAELEALTFE------HPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------STTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3445666788889999999999999999988 667778999999999999999999999998865
No 244
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=92.25 E-value=0.66 Score=49.62 Aligned_cols=80 Identities=9% Similarity=-0.044 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHH
Q 010705 382 AAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQR 461 (503)
Q Consensus 382 ~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrl 461 (503)
.++..+|+.+.-+..+..|..+|.+|+.+ .|.....|+.+|.++...++.-+|+-+|.++|....-.+.+.-++
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~------~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL 226 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQL------VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNL 226 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHh------CCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHH
Confidence 35677899999999999999999999999 455568999999999999999999999999997765566666666
Q ss_pred HHHHHH
Q 010705 462 ALLYES 467 (503)
Q Consensus 462 A~Ay~~ 467 (503)
...+..
T Consensus 227 ~~~f~~ 232 (497)
T 1ya0_A 227 QKALSK 232 (497)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666554
No 245
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=92.15 E-value=3.9 Score=42.44 Aligned_cols=74 Identities=15% Similarity=0.183 Sum_probs=56.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHc----CCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCCHHHHHHH
Q 010705 425 STRASCYKEVGEYKKAVADCSKVLEQ----DDT--NVSVLVQRALLYESMEKYKLGAEDLRTVLKID---PSNRIARSTI 495 (503)
Q Consensus 425 sNrAlcylrLGdyeeALedaekALkL----dPd--~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLD---Pen~eAk~~L 495 (503)
..++..|+..|+|.+|++.+++.++- |.. -.+.+.....+|..++++.++.+.|.++.+.. +.++.++..+
T Consensus 103 ~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i 182 (394)
T 3txn_A 103 ARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGAL 182 (394)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHH
Confidence 37899999999999999999887763 211 14577778999999999999999999998764 2445555555
Q ss_pred HHH
Q 010705 496 HRL 498 (503)
Q Consensus 496 a~L 498 (503)
..+
T Consensus 183 ~~~ 185 (394)
T 3txn_A 183 DLQ 185 (394)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 246
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.71 E-value=0.58 Score=49.67 Aligned_cols=28 Identities=14% Similarity=-0.010 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAV 408 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKAL 408 (503)
...|..+|..+.+.++++.|+++|.++-
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~~ 708 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNAH 708 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 5678999999999999999999999864
No 247
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.64 E-value=0.26 Score=53.31 Aligned_cols=74 Identities=15% Similarity=0.099 Sum_probs=60.9
Q ss_pred CChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-----CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 010705 416 DMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDD-----TNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNR 489 (503)
Q Consensus 416 ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdP-----d~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~ 489 (503)
+....+.++..+-..|++.+.|++|.....++.-... .....+|.+|.++....+|.+|.++|..|++..|.+.
T Consensus 226 D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 226 DNETKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp SSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred CcchhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 3456788899999999999999999999999852211 1245677889999999999999999999999988653
No 248
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=90.87 E-value=1.7 Score=50.27 Aligned_cols=99 Identities=12% Similarity=0.028 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHH-----------------HhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHH
Q 010705 383 AAKNKGVDNQKAGQYADAIKWLSWAVILL-----------------EKSGDMATMMEVLSTRASCYKEVGEYKKAVADCS 445 (503)
Q Consensus 383 alk~lGn~~fkqGDY~eAIk~YeKALeL~-----------------pk~~ddpd~A~aysNrAlcylrLGdyeeALedae 445 (503)
..+.+|.+++..|++++|.++|++|..-+ +...........|.....++.+.+.++.+++.++
T Consensus 844 ~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~ 923 (1139)
T 4fhn_B 844 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSL 923 (1139)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 45789999999999999999998874211 1111111234567777888888999999999999
Q ss_pred HHHHcCC-CCH----HHHHHHHHHHHHcCCHHHHHHHHHHH
Q 010705 446 KVLEQDD-TNV----SVLVQRALLYESMEKYKLGAEDLRTV 481 (503)
Q Consensus 446 kALkLdP-d~~----kAlyrlA~Ay~~LGdyeeAle~LqkA 481 (503)
.||+... ++. ..|.++=..+..+++|++|...+...
T Consensus 924 lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 924 LADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp HHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred HHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 9998754 333 25667778889999999998888654
No 249
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=89.94 E-value=1.8 Score=40.45 Aligned_cols=81 Identities=10% Similarity=-0.098 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQ 460 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyr 460 (503)
...|+.+|..+..+++++-|.++|.++-++ ..+..+|.-.|+.++-.+..+.|..... . ..
T Consensus 34 ~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~--------------~~L~~Ly~~tg~~e~L~kla~iA~~~g~--~---n~ 94 (177)
T 3mkq_B 34 SITWERLIQEALAQGNASLAEMIYQTQHSF--------------DKLSFLYLVTGDVNKLSKMQNIAQTRED--F---GS 94 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTTCH--------------HHHHHHHHHHTCHHHHHHHHHHHHHTTC--H---HH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHhCCH--------------HHHHHHHHHhCCHHHHHHHHHHHHHCcc--H---HH
Confidence 457888888888888888888888776433 2233444555565554444444443321 1 11
Q ss_pred HHHHHHHcCCHHHHHHHHHH
Q 010705 461 RALLYESMEKYKLGAEDLRT 480 (503)
Q Consensus 461 lA~Ay~~LGdyeeAle~Lqk 480 (503)
.-.+++.+|+++++++.|.+
T Consensus 95 af~~~l~lGdv~~~i~lL~~ 114 (177)
T 3mkq_B 95 MLLNTFYNNSTKERSSIFAE 114 (177)
T ss_dssp HHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHH
Confidence 12344555666666555544
No 250
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=89.06 E-value=5.5 Score=40.20 Aligned_cols=98 Identities=8% Similarity=-0.043 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCH--HHHHHH----------------
Q 010705 382 AAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEY--KKAVAD---------------- 443 (503)
Q Consensus 382 ~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdy--eeALed---------------- 443 (503)
+.++.+...|.++++|++|++++......+-+.+....-+++...+..+|-+.+.- ++.+.-
T Consensus 34 Q~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~r~ 113 (312)
T 2wpv_A 34 QTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELDPSEPNLK 113 (312)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCCTTCTTHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCCCCchHH
Confidence 45677888888899999999885444333222222222222222233333332211 222222
Q ss_pred --HHHHHHc-------CCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 010705 444 --CSKVLEQ-------DDTNVSVLVQRALLYESMEKYKLGAEDLR 479 (503)
Q Consensus 444 --aekALkL-------dPd~~kAlyrlA~Ay~~LGdyeeAle~Lq 479 (503)
+++||+- .-.+++.|..+|..|...+++.+|..+|-
T Consensus 114 ~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 114 DVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp HHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 2222211 11367788899999999999999999885
No 251
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=88.86 E-value=15 Score=35.09 Aligned_cols=108 Identities=14% Similarity=0.025 Sum_probs=77.1
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HHHh----------cCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVI--LLEK----------SGDMATMMEVLSTRASCYKEVGEYKKAVADCSKV 447 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALe--L~pk----------~~ddpd~A~aysNrAlcylrLGdyeeALedaekA 447 (503)
.+...+-+..++.+.+||..|+..++..|+ +.+. .-+..+..-.+..+|.++-+.++-+||+.++...
T Consensus 61 T~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~S 140 (242)
T 3kae_A 61 TCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRS 140 (242)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhh
Confidence 456677788999999999999999999983 2100 0111233445678899999999999999999876
Q ss_pred HHcCCCCH------------------------------------------------H----------HHH--HHHHHHHH
Q 010705 448 LEQDDTNV------------------------------------------------S----------VLV--QRALLYES 467 (503)
Q Consensus 448 LkLdPd~~------------------------------------------------k----------Aly--rlA~Ay~~ 467 (503)
..+++-.+ + .++ ..+.-|+.
T Consensus 141 f~~~~lf~~vEnliyeN~vp~~~d~~~i~~~~~~~i~~~y~~d~~~lHe~~s~~~ikkY~n~iPGiGSY~va~aa~~yf~ 220 (242)
T 3kae_A 141 FGKSFLFSPVENLLLENKVPQKRDKENVRQTGRRGIEEEYVSDSIEFHESLSPSLVKKYMEHVPGIGSYFISNAARRYFN 220 (242)
T ss_dssp HHHCCCHHHHHHHHHTTCCCCCC-----------CHHHHHHHHHHHHHHHCCHHHHHHHHTSTTTHHHHHHHHHHHHHHH
T ss_pred cCCccccchHHHHHhhcCCCcccchHHHHhhhhccchhhhhhhHHHHHHhccHHHHHHHHHhCCCchhHHHHHHHHHHHh
Confidence 55432110 0 011 13667888
Q ss_pred cCCHHHHHHHHHHHHHhCCC
Q 010705 468 MEKYKLGAEDLRTVLKIDPS 487 (503)
Q Consensus 468 LGdyeeAle~LqkALkLDPe 487 (503)
+|-.++..++|..+-++||.
T Consensus 221 lg~~d~s~~lf~~lR~kDP~ 240 (242)
T 3kae_A 221 LGMNDKSKACFELVRRKDPM 240 (242)
T ss_dssp TTCHHHHHHHHHHHHHHSTT
T ss_pred cccchhHHHHHHHHHhcCCC
Confidence 99999999999888888885
No 252
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=88.18 E-value=5.7 Score=46.56 Aligned_cols=104 Identities=9% Similarity=-0.080 Sum_probs=79.2
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCCHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQD-DTNVSVL 458 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLd-Pd~~kAl 458 (503)
.-..|..+-+.|++.|+.++|.++|.+..+...+ +-.| +...|+-+-..|.+.|++++|++.+++..+.. .-+...|
T Consensus 126 ~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~k-G~~P-dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTY 203 (1134)
T 3spa_A 126 QQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQK-RKLL-TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSY 203 (1134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHH-HTTC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhc-CCCC-CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHH
Confidence 3345777888999999999999999776543211 1122 46788889999999999999999999988764 2255666
Q ss_pred HHHHHHHHHcCCH-HHHHHHHHHHHHhC
Q 010705 459 VQRALLYESMEKY-KLGAEDLRTVLKID 485 (503)
Q Consensus 459 yrlA~Ay~~LGdy-eeAle~LqkALkLD 485 (503)
..+-.+|.+.|+. ++|.+.|+++.+..
T Consensus 204 ntLI~glcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 204 AAALQCMGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHcC
Confidence 6677788888874 78899999988753
No 253
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=87.66 E-value=6.9 Score=40.00 Aligned_cols=97 Identities=14% Similarity=0.158 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCCChhhHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHcC-------
Q 010705 382 AAAKNKGVDNQKAGQYADAIKWLSW-AVILLEKSGDMATMMEVLSTRASCYKEVGE--YKKAVADCSKVLEQD------- 451 (503)
Q Consensus 382 ~alk~lGn~~fkqGDY~eAIk~YeK-ALeL~pk~~ddpd~A~aysNrAlcylrLGd--yeeALedaekALkLd------- 451 (503)
+.++.+...|.++++|.+|++++.. |+.+++ .+....-+++...+..+|-+.+- -++.+.-+-+++.+-
T Consensus 36 Q~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~-~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~~~~~~~p~r 114 (336)
T 3lpz_A 36 QETRLVAARYSKQGNWAAAVDILASVSQTLLR-SGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLRLFQPGEPVR 114 (336)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSCTTCHHH
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH-CCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCCCCcHH
Confidence 4567788889999999999997544 444433 22222222233333344433321 112222222222211
Q ss_pred ------------------CCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 010705 452 ------------------DTNVSVLVQRALLYESMEKYKLGAEDLR 479 (503)
Q Consensus 452 ------------------Pd~~kAlyrlA~Ay~~LGdyeeAle~Lq 479 (503)
-.+++.|..+|..|...++|.+|..+|-
T Consensus 115 ~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~i 160 (336)
T 3lpz_A 115 KRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLV 160 (336)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHHH
Confidence 2456788889999999999999999883
No 254
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=87.21 E-value=22 Score=36.25 Aligned_cols=112 Identities=17% Similarity=0.044 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--CCChhhHHH--HHHHHHHHHHcCCHHHHH-----HHHHHHHH---
Q 010705 382 AAAKNKGVDNQKAGQYADAIKWLSWAVILLEKS--GDMATMMEV--LSTRASCYKEVGEYKKAV-----ADCSKVLE--- 449 (503)
Q Consensus 382 ~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~--~ddpd~A~a--ysNrAlcylrLGdyeeAL-----edaekALk--- 449 (503)
......|..++..|++.+|++.|+.+|..++-. .++.+..++ +..++.-|..-=..|.+. ++..+.++
T Consensus 115 ~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAA 194 (325)
T 3mv2_A 115 NEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAA 194 (325)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence 334567999999999999999999999876632 112222222 222222221100001000 11122222
Q ss_pred ------cCCCCHHHHHHHHH-HHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 010705 450 ------QDDTNVSVLVQRAL-LYESMEKYKLGAEDLRTVLKIDPSNRIARS 493 (503)
Q Consensus 450 ------LdPd~~kAlyrlA~-Ay~~LGdyeeAle~LqkALkLDPen~eAk~ 493 (503)
|.|.+...-++.|. ..++.++|.-|....++.|++.|....+++
T Consensus 195 YFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a~q 245 (325)
T 3mv2_A 195 YFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRAEQ 245 (325)
T ss_dssp HGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHHHH
T ss_pred HhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHHHH
Confidence 23333333333343 457789999999999999999997655443
No 255
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.33 E-value=2.1 Score=44.15 Aligned_cols=82 Identities=15% Similarity=0.098 Sum_probs=63.9
Q ss_pred ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHH
Q 010705 417 MATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDD---TNVSVLVQRALLYESMEKYKLGAEDLRTVLKID--PSNRIA 491 (503)
Q Consensus 417 dpd~A~aysNrAlcylrLGdyeeALedaekALkLdP---d~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLD--Pen~eA 491 (503)
+.....++..+|..|++.|++++|++.|.+++.... .-...++.+..++...+++..+...+.++..+- ..+.+.
T Consensus 127 e~e~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~ 206 (429)
T 4b4t_R 127 ELEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWER 206 (429)
T ss_dssp CCCCSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHH
Confidence 334556788999999999999999999999887642 336788899999999999999999999997763 234444
Q ss_pred HHHHHHH
Q 010705 492 RSTIHRL 498 (503)
Q Consensus 492 k~~La~L 498 (503)
+..+..+
T Consensus 207 ~~~lk~~ 213 (429)
T 4b4t_R 207 RNRYKTY 213 (429)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444433
No 256
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=85.05 E-value=2.9 Score=38.79 Aligned_cols=83 Identities=14% Similarity=0.017 Sum_probs=63.1
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVL 458 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAl 458 (503)
..+..+...+.. ...+|.++|.+.|+.++.+ . ..++.+|...|..-+++|+..+|.+.+.++|.+.|...+.
T Consensus 59 rYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~-h-----KkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~- 130 (161)
T 4h7y_A 59 SFARIQVRFAEL-KAIQEPDDARDYFQMARAN-C-----KKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEM- 130 (161)
T ss_dssp HHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHH-C-----TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH-
T ss_pred HHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHH-h-----HHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHH-
Confidence 345555555633 5669999999999999987 1 2348999999999999999999999999999999876543
Q ss_pred HHHHHHHHHcC
Q 010705 459 VQRALLYESME 469 (503)
Q Consensus 459 yrlA~Ay~~LG 469 (503)
+..|..-+..|
T Consensus 131 le~a~~nl~~~ 141 (161)
T 4h7y_A 131 LEIALRNLNLQ 141 (161)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHhhhcC
Confidence 33444444444
No 257
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=84.78 E-value=5.4 Score=43.12 Aligned_cols=77 Identities=9% Similarity=-0.053 Sum_probs=60.8
Q ss_pred CCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc-CCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Q 010705 376 PAGVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKS-GDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTN 454 (503)
Q Consensus 376 ~~~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~-~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~ 454 (503)
+.+..+..+..+-..|...+.|++|.++..++. .|.. ......++.++-+|.++.-+++|.+|.+++..|+...|..
T Consensus 226 D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 226 DNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp SSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred CcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 444567778888899999999999999999985 2221 1233457777889999999999999999999999887643
No 258
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=81.59 E-value=6.3 Score=32.79 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEK 413 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk 413 (503)
.+..+...|..+-..++|++|+.+|.+||+++-.
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~ 47 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQ 47 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 4566778888899999999999999999987553
No 259
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=80.71 E-value=9.1 Score=38.96 Aligned_cols=108 Identities=15% Similarity=0.264 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--CCChhhHHH--HHHHHHHH-------HHcCCHHH-HHHHHHHHHH-
Q 010705 383 AAKNKGVDNQKAGQYADAIKWLSWAVILLEKS--GDMATMMEV--LSTRASCY-------KEVGEYKK-AVADCSKVLE- 449 (503)
Q Consensus 383 alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~--~ddpd~A~a--ysNrAlcy-------lrLGdyee-ALedaekALk- 449 (503)
.....|..++..|++.+|++.|+.+|..++-. .++.+..++ +..++.-| +..++..+ ..++..+.++
T Consensus 104 ~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lEL 183 (320)
T 3mkr_B 104 QRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEM 183 (320)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHH
Confidence 34577999999999999999999999876532 111111222 21122111 11121100 0122223332
Q ss_pred --------cCCCCHHHHHHHHH-HHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 010705 450 --------QDDTNVSVLVQRAL-LYESMEKYKLGAEDLRTVLKIDPSNRI 490 (503)
Q Consensus 450 --------LdPd~~kAlyrlA~-Ay~~LGdyeeAle~LqkALkLDPen~e 490 (503)
|.|.+...-++.|. ..++.++|.-|....++.|++.|....
T Consensus 184 AAYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~ 233 (320)
T 3mkr_B 184 AAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPEV 233 (320)
T ss_dssp HHHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHHH
T ss_pred HHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHH
Confidence 23434333344443 357789999999999999999886443
No 260
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=80.07 E-value=10 Score=39.36 Aligned_cols=76 Identities=9% Similarity=-0.066 Sum_probs=59.6
Q ss_pred CCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC-ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q 010705 375 PPAGVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGD-MATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ 450 (503)
Q Consensus 375 ~~~~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~d-dpd~A~aysNrAlcylrLGdyeeALedaekALkL 450 (503)
.+.....+.+......|+..+||..|..+++++......... .......+...+..+...++|.+|-++|..++..
T Consensus 171 ~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 171 MEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 344456778888999999999999999999998643333322 3345677788899999999999999999998764
No 261
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=79.18 E-value=6.8 Score=32.11 Aligned_cols=33 Identities=21% Similarity=0.188 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLE 412 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~p 412 (503)
.+..+..+|..+-+.|+|.+|+.+|.++|+++.
T Consensus 18 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 50 (83)
T 2w2u_A 18 MARKYAINAVKADKEGNAEEAITNYKKAIEVLA 50 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 456677788888999999999999999998754
No 262
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=78.22 E-value=5.7 Score=34.59 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLE 412 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~p 412 (503)
.+..+..++..+-..++|++|+.+|.+||+++-
T Consensus 17 kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~ 49 (117)
T 2cpt_A 17 KAIDLASKAAQEDKAGNYEEALQLYQHAVQYFL 49 (117)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 455667778888888999999999999998654
No 263
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=76.50 E-value=10 Score=30.88 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLE 412 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~p 412 (503)
.+..+..+|..+-+.|+|.+|+.+|.+||+++.
T Consensus 10 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 42 (83)
T 2v6y_A 10 MARKYAILAVKADKEGKVEDAITYYKKAIEVLS 42 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 455677778888889999999999999987644
No 264
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=76.37 E-value=13 Score=30.12 Aligned_cols=33 Identities=24% Similarity=0.213 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLE 412 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~p 412 (503)
.+..+...+...-..++|++|+.+|.+|++++-
T Consensus 12 ~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~ 44 (85)
T 2v6x_A 12 KGIELVQKAIDLDTATQYEEAYTAYYNGLDYLM 44 (85)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 466677788888899999999999999998644
No 265
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=76.03 E-value=11 Score=31.08 Aligned_cols=34 Identities=18% Similarity=0.242 Sum_probs=27.8
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLE 412 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~p 412 (503)
..+..+...+..+-..|+|++|+.+|.+||+++-
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll 47 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLL 47 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 3456677788888899999999999999998754
No 266
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=74.34 E-value=25 Score=36.84 Aligned_cols=48 Identities=10% Similarity=0.072 Sum_probs=36.7
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHH
Q 010705 452 DTNVSVLVQRALLYESMEKYKLGAEDLRTVLKID------PSNRIARSTIHRLT 499 (503)
Q Consensus 452 Pd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLD------Pen~eAk~~La~Lq 499 (503)
-.+...|..+|..|++.++|.+|++.+-++-..- .++.|+.+++.++.
T Consensus 293 n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIA 346 (472)
T 3re2_A 293 DHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDDEEMYKEFHEIA 346 (472)
T ss_dssp TCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHH
T ss_pred cCCccchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHH
Confidence 4567788889999999999999999998876642 35677777766654
No 267
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=72.75 E-value=49 Score=31.49 Aligned_cols=84 Identities=5% Similarity=0.016 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHh---cCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHcCCHHHHHH
Q 010705 402 KWLSWAVILLEK---SGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQD--DTNVSVLVQRALLYESMEKYKLGAE 476 (503)
Q Consensus 402 k~YeKALeL~pk---~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLd--Pd~~kAlyrlA~Ay~~LGdyeeAle 476 (503)
.++++++..... ..+|+....+|...+.++ ..+...++...|....... -..+..|..-|..|...|++++|.+
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~ 136 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKV 136 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 567777765543 456788888888887765 2334678888888776554 5667777788999999999999999
Q ss_pred HHHHHHHhCC
Q 010705 477 DLRTVLKIDP 486 (503)
Q Consensus 477 ~LqkALkLDP 486 (503)
.|+.+++..-
T Consensus 137 Vy~~GI~~~A 146 (202)
T 3esl_A 137 LLELGAENNC 146 (202)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 9999999763
No 268
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=71.68 E-value=7.2 Score=41.30 Aligned_cols=65 Identities=3% Similarity=-0.066 Sum_probs=50.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcC--------C--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCC
Q 010705 424 LSTRASCYKEVGEYKKAVADCSKVLEQD--------D--TNVSVLVQRALLYESMEKYKLGAEDLRTVLKI-DPSN 488 (503)
Q Consensus 424 ysNrAlcylrLGdyeeALedaekALkLd--------P--d~~kAlyrlA~Ay~~LGdyeeAle~LqkALkL-DPen 488 (503)
..++-.+|+++++..-|...++..-... | +.+..+|.+|..++...+|.+|.++|..|++. .|.+
T Consensus 179 ~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 179 VNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 3467788999999888777775443222 2 23567888999999999999999999999999 7755
No 269
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=70.87 E-value=7.9 Score=42.39 Aligned_cols=56 Identities=9% Similarity=-0.043 Sum_probs=45.6
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 428 ASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLK 483 (503)
Q Consensus 428 AlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALk 483 (503)
+...++.++++.|.+++++.-.-.....+..|-+|.++..+|+.++|...|+++.+
T Consensus 292 ~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 292 VRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 33456789999999998765543345688899999999999999999999998875
No 270
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=70.87 E-value=32 Score=36.70 Aligned_cols=49 Identities=4% Similarity=-0.052 Sum_probs=38.3
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHh
Q 010705 452 DTNVSVLVQRALLYESMEKYKLGAEDLRTVLKID------PSNRIARSTIHRLTK 500 (503)
Q Consensus 452 Pd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLD------Pen~eAk~~La~Lqk 500 (503)
-.+...|..+|..|++.++|.+|++.+-++-..- .++.|+.+++.++..
T Consensus 315 n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAn 369 (550)
T 3u84_A 315 DEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVAN 369 (550)
T ss_dssp TCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHH
T ss_pred cCCccceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHH
Confidence 4567788889999999999999999998876642 466788777766643
No 271
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=70.74 E-value=31 Score=31.72 Aligned_cols=78 Identities=13% Similarity=0.099 Sum_probs=53.2
Q ss_pred HHHHHHHHH---HhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 010705 403 WLSWAVILL---EKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ--DDTNVSVLVQRALLYESMEKYKLGAED 477 (503)
Q Consensus 403 ~YeKALeL~---pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkL--dPd~~kAlyrlA~Ay~~LGdyeeAle~ 477 (503)
++++++..+ ++..+++....+|...+.+. . ++.+.|+..... .-..+..|..-|..|...+++++|.+.
T Consensus 45 lLErc~~~f~~~~~YknD~RyLklWl~ya~~~---~---~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~I 118 (164)
T 2wvi_A 45 LLERAVEALQGEKRYYSDPRFLNLWLKLGRLC---N---EPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAI 118 (164)
T ss_dssp HHHHHHHHTTTCGGGTTCHHHHHHHHHHHHHC---S---CHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhhhhhhhccCHHHHHHHHHHHHhc---C---CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHH
Confidence 444444443 34456777777777777653 3 355556555543 355677777778999999999999999
Q ss_pred HHHHHHhCC
Q 010705 478 LRTVLKIDP 486 (503)
Q Consensus 478 LqkALkLDP 486 (503)
|+.+++..-
T Consensus 119 y~~Gi~~~A 127 (164)
T 2wvi_A 119 FQEGIQQKA 127 (164)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHcCC
Confidence 999998763
No 272
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=70.45 E-value=40 Score=35.89 Aligned_cols=49 Identities=4% Similarity=-0.048 Sum_probs=36.6
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHh
Q 010705 452 DTNVSVLVQRALLYESMEKYKLGAEDLRTVLKI------DPSNRIARSTIHRLTK 500 (503)
Q Consensus 452 Pd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkL------DPen~eAk~~La~Lqk 500 (503)
-.+...|..+|-.++..++|.+|++.+-++-+. .-++.++.+++.++..
T Consensus 300 ~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~eIan 354 (489)
T 4gq4_A 300 DEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVAN 354 (489)
T ss_dssp TCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHHHHH
T ss_pred cCcccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHHHHHH
Confidence 345667778899999999999999999887653 3466777777766543
No 273
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=70.09 E-value=19 Score=33.49 Aligned_cols=81 Identities=10% Similarity=-0.104 Sum_probs=60.3
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--------CCCHHHH
Q 010705 387 KGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQD--------DTNVSVL 458 (503)
Q Consensus 387 lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLd--------Pd~~kAl 458 (503)
+-..+...|+++.|+++.++. +....|..+|...++.++++-|.+.|+++-.++ -.+.+-+
T Consensus 11 rF~LAL~lg~l~~A~e~a~~l-----------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L 79 (177)
T 3mkq_B 11 RFDLALEYGNLDAALDEAKKL-----------NDSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKL 79 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH-----------CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHh-----------CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHH
Confidence 344567889999998876542 235789999999999999999999998764322 2345556
Q ss_pred HHHHHHHHHcCCHHHHHHHH
Q 010705 459 VQRALLYESMEKYKLGAEDL 478 (503)
Q Consensus 459 yrlA~Ay~~LGdyeeAle~L 478 (503)
-.++.+-...+++.-|...+
T Consensus 80 ~kla~iA~~~g~~n~af~~~ 99 (177)
T 3mkq_B 80 SKMQNIAQTREDFGSMLLNT 99 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHCccHHHHHHHH
Confidence 67788888888888877665
No 274
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=68.64 E-value=30 Score=40.04 Aligned_cols=69 Identities=12% Similarity=-0.096 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH---cC--------------------CCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 010705 423 VLSTRASCYKEVGEYKKAVADCSKVLE---QD--------------------DTNVSVLVQRALLYESMEKYKLGAEDLR 479 (503)
Q Consensus 423 aysNrAlcylrLGdyeeALedaekALk---Ld--------------------Pd~~kAlyrlA~Ay~~LGdyeeAle~Lq 479 (503)
..+-+|.||+..|++++|.++|+++-. .+ ...+..|+....++...+.++.+++..+
T Consensus 844 ~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~ 923 (1139)
T 4fhn_B 844 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSL 923 (1139)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 346799999999999999999987631 00 1123455666778888999999999999
Q ss_pred HHHHhCC-CCHHH
Q 010705 480 TVLKIDP-SNRIA 491 (503)
Q Consensus 480 kALkLDP-en~eA 491 (503)
.|++..+ ++...
T Consensus 924 lAi~~~~~~~~~~ 936 (1139)
T 4fhn_B 924 LADASKETDDEDL 936 (1139)
T ss_dssp HHHHHCCSCCHHH
T ss_pred HHHHhccCCChhh
Confidence 9999865 44433
No 275
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=67.54 E-value=18 Score=41.21 Aligned_cols=97 Identities=12% Similarity=-0.087 Sum_probs=63.2
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-c---------------
Q 010705 387 KGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLE-Q--------------- 450 (503)
Q Consensus 387 lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALk-L--------------- 450 (503)
+...+...+.|+-|. ++.+-.+..+ ..-+-+|.||+..|++++|.++|++|-. +
T Consensus 816 l~~~L~~~~~~~~a~-------eL~~~~~~t~---~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ 885 (950)
T 4gq2_M 816 LVEKLFLFKQYNACM-------QLIGWLNSDP---IAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQE 885 (950)
T ss_dssp HHHHHHHTTCHHHHH-------HHGGGCCSSH---HHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHH
T ss_pred HHHHHHHhcHHHHHH-------HHHhhcCCCh---HHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhh
Confidence 344555566655443 3333333333 3346699999999999999999987531 1
Q ss_pred -----CCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHHHHH
Q 010705 451 -----DDTN--VSVLVQRALLYESMEKYKLGAEDLRTVLKI-DPSNRIARS 493 (503)
Q Consensus 451 -----dPd~--~kAlyrlA~Ay~~LGdyeeAle~LqkALkL-DPen~eAk~ 493 (503)
.+.. ...|++...++...+-|+-+++..+.||+. .++++....
T Consensus 886 ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l~~ 936 (950)
T 4gq2_M 886 IAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSI 936 (950)
T ss_dssp HHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHHHH
T ss_pred ccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccchH
Confidence 0111 124455688888899999999999999975 455555443
No 276
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=65.40 E-value=40 Score=32.69 Aligned_cols=69 Identities=17% Similarity=-0.035 Sum_probs=49.0
Q ss_pred HHHHHHHHHHH-----HHhCCHHHHHHHHHHHHHHHHh--cCCChhhHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 010705 381 GAAAKNKGVDN-----QKAGQYADAIKWLSWAVILLEK--SGDMATMMEVLSTRASCYKE-VGEYKKAVADCSKVLE 449 (503)
Q Consensus 381 A~alk~lGn~~-----fkqGDY~eAIk~YeKALeL~pk--~~ddpd~A~aysNrAlcylr-LGdyeeALedaekALk 449 (503)
+-.++.+|+.| +..|+-+.|.+.|++|+++..+ .+-.|....+..|.+..|++ +++.++|.+.+++|+.
T Consensus 120 VFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 120 FFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 34455566554 2356678899999999988764 23356666677777777665 7789999999999876
No 277
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=63.89 E-value=34 Score=33.08 Aligned_cols=68 Identities=10% Similarity=0.065 Sum_probs=47.6
Q ss_pred cCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 010705 414 SGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ--DDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPS 487 (503)
Q Consensus 414 ~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkL--dPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPe 487 (503)
..+++....+|..++.+. +++...|...... .-..+..|..-|..|...|+|++|.+.|+.+++..-.
T Consensus 113 YknD~RyLklWl~Ya~~~------~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 113 YKDDVRYLRIWMQYVNYI------DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp GTTCHHHHHHHHHHHTTC------SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB
T ss_pred ccCCHHHHHHHHHHHHcc------CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 344666666666655531 3555555555543 3556667777899999999999999999999998643
No 278
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=63.14 E-value=38 Score=30.80 Aligned_cols=81 Identities=9% Similarity=-0.013 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHH---hcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHcCCHHHHH
Q 010705 401 IKWLSWAVILLE---KSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ--DDTNVSVLVQRALLYESMEKYKLGA 475 (503)
Q Consensus 401 Ik~YeKALeL~p---k~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkL--dPd~~kAlyrlA~Ay~~LGdyeeAl 475 (503)
..++++++..+. +..+++....+|...+.+. .++.+.|+..... .-..+..|..-|..|...|++++|.
T Consensus 48 ~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~------~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~ 121 (152)
T 4a1g_A 48 ITLLEHLMKEFLDKKKYHNDPRFISYCLKFAEYN------SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHAS 121 (152)
T ss_dssp HHHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTTB------SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHhcccccccCCHHHHHHHHHHHHhc------CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 355666665543 3455777777777776553 3466777666654 3556777777899999999999999
Q ss_pred HHHHHHHHhCCC
Q 010705 476 EDLRTVLKIDPS 487 (503)
Q Consensus 476 e~LqkALkLDPe 487 (503)
+.|+.+++..-+
T Consensus 122 ~Vy~~Gi~~~A~ 133 (152)
T 4a1g_A 122 AVLQRGIQNQAE 133 (152)
T ss_dssp HHHHHHHHTTCB
T ss_pred HHHHHHHHcCCc
Confidence 999999997544
No 279
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=63.00 E-value=24 Score=30.05 Aligned_cols=33 Identities=21% Similarity=0.207 Sum_probs=27.9
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLE 412 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~p 412 (503)
.+..+-.++..+.+.++|++||+++++|..++.
T Consensus 14 ~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~ 46 (97)
T 2crb_A 14 LAHQQSRRADRLLAAGKYEEAISCHRKATTYLS 46 (97)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 466677789999999999999999999987644
No 280
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=62.35 E-value=26 Score=38.78 Aligned_cols=98 Identities=11% Similarity=0.036 Sum_probs=55.1
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcC--C---------HHHHHHHHHHHHHcCC
Q 010705 384 AKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVG--E---------YKKAVADCSKVLEQDD 452 (503)
Q Consensus 384 lk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLG--d---------yeeALedaekALkLdP 452 (503)
....|..+..+|++++|+++|..|-+.+. -...+...++.+..... + .+.-+..+++.+++..
T Consensus 446 ~~~aA~~ae~~G~~~dAi~LY~La~~~d~------vl~lln~~Ls~~l~~~~~~~~~~~~~~~~~~~l~~la~~i~~~y~ 519 (661)
T 2qx5_A 446 TEQAARRADEDGRIYDSILLYQLAEEYDI------VITLVNSLLSDTLSASDLDQPLVGPDDNSETNPVLLARRMASIYF 519 (661)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTTCHHH------HHHHHHHHHHHHHHHSCTTSCSSCSSCCTTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHhcCHHH------HHHHHHHHHHHHhcccccccccccccccccccHHHHHHHHHHHHh
Confidence 34567889999999999999877654411 11112223444443331 1 0122333333333322
Q ss_pred C-----------CH---HHHHHHHHHH--HHcCCHHHHHHHHHHHHHhCCCC
Q 010705 453 T-----------NV---SVLVQRALLY--ESMEKYKLGAEDLRTVLKIDPSN 488 (503)
Q Consensus 453 d-----------~~---kAlyrlA~Ay--~~LGdyeeAle~LqkALkLDPen 488 (503)
. +. ..++.+..++ +..|+|++|++.+++ |++-|-+
T Consensus 520 ~~~~~~~~~~~~~~~t~~lLl~l~~f~~~~~~g~~~~AL~~i~~-L~llPl~ 570 (661)
T 2qx5_A 520 DNAGISRQIHVKNKEICMLLLNISSIRELYFNKQWQETLSQMEL-LDLLPFS 570 (661)
T ss_dssp TCHHHHTTSCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH-TSCSCC-
T ss_pred cCchhhhhccHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHh-CCCCCCC
Confidence 2 12 2344444444 889999999999987 6677866
No 281
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=61.17 E-value=33 Score=29.28 Aligned_cols=50 Identities=18% Similarity=0.248 Sum_probs=36.3
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHH-HHHHHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVL-STRASCYK 432 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~ay-sNrAlcyl 432 (503)
..+..+...|..+|+.++|.+|+.+|+++..+. +.+..-.++ +-+..|-.
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t----en~~i~ki~~fyl~ec~k 101 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLS----DNEEIKKIASFYLEECRK 101 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----CCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccc----cCHHHHHHHHHHHHHHHH
Confidence 467788889999999999999999999998662 234444444 44555543
No 282
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=61.12 E-value=1e+02 Score=29.47 Aligned_cols=98 Identities=7% Similarity=-0.100 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCCh--h-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMA--T-MMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSV 457 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddp--d-~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kA 457 (503)
.......=+++..+.+|++|++..++.-+++....... . ....-.-...+-.+..+..+.+ .+.+.. ......
T Consensus 18 l~~~~deLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L---~~~l~~-~~~~~~ 93 (235)
T 2d2s_A 18 LDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKL---SQSILS-SNEIVH 93 (235)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHH---HHHHHT-CSSHHH
T ss_pred HHcccHHHHHHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHH---HHHHHh-cCCHHH
Confidence 34455667788999999999999999888776543211 0 1111111112222222222222 222333 345667
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH
Q 010705 458 LVQRALLYESMEKYKLGAEDLRTVL 482 (503)
Q Consensus 458 lyrlA~Ay~~LGdyeeAle~LqkAL 482 (503)
..+....+.++|+-++|++.|.++-
T Consensus 94 ~r~~v~~L~rLg~~~~A~~lfL~~r 118 (235)
T 2d2s_A 94 LKSGTENMIKLGLPEQALDLFLQNR 118 (235)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCChhHHHHHHHHHH
Confidence 7777888999999999999998764
No 283
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=60.70 E-value=14 Score=38.28 Aligned_cols=31 Identities=13% Similarity=0.113 Sum_probs=18.6
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 419 TMMEVLSTRASCYKEVGEYKKAVADCSKVLE 449 (503)
Q Consensus 419 d~A~aysNrAlcylrLGdyeeALedaekALk 449 (503)
....++..+|.+|+.++++++|+++++++|.
T Consensus 188 tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 188 NKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 3445555566666666666666666666653
No 284
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=59.33 E-value=16 Score=38.42 Aligned_cols=33 Identities=18% Similarity=0.134 Sum_probs=23.3
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q 010705 418 ATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ 450 (503)
Q Consensus 418 pd~A~aysNrAlcylrLGdyeeALedaekALkL 450 (503)
.....++..+|.+|+.++++++|+++++++|..
T Consensus 200 ~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 200 IDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 345566677777777777777777777777753
No 285
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=59.18 E-value=16 Score=29.84 Aligned_cols=33 Identities=12% Similarity=0.111 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEK 413 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk 413 (503)
......+|..+...|+|+.|+.+|+.+++.+.+
T Consensus 12 i~e~~k~ARe~Al~GnYdta~~yY~g~~~qI~k 44 (78)
T 2rpa_A 12 IVENVKLAREYALLGNYDSAMVYYQGVLDQMNK 44 (78)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 344567899999999999999999999988665
No 286
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=57.75 E-value=23 Score=28.59 Aligned_cols=31 Identities=10% Similarity=0.101 Sum_probs=15.4
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 010705 461 RALLYESMEKYKLGAEDLRTVLKIDPSNRIA 491 (503)
Q Consensus 461 lA~Ay~~LGdyeeAle~LqkALkLDPen~eA 491 (503)
+|..+...|++++|+.+|.+|+++.|+=.+.
T Consensus 23 ~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~L 53 (73)
T 3ax2_A 23 LGEELLAQGDYEKGVDHLTNAIAVCGQPQQL 53 (73)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCSSCHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCCHHHH
Confidence 3444555555555555555555555444333
No 287
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=57.18 E-value=20 Score=39.31 Aligned_cols=47 Identities=19% Similarity=0.222 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhhh
Q 010705 456 SVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKMV 502 (503)
Q Consensus 456 kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~LqklL 502 (503)
...+.+|..++..|+|..|++.+..++..+|+|.+++..++.+.+++
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l 496 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQL 496 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 35666777778888888888888888888888888888887776654
No 288
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=56.60 E-value=19 Score=33.64 Aligned_cols=55 Identities=7% Similarity=-0.146 Sum_probs=40.8
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHH-----HHHHHHHcCCHHH
Q 010705 419 TMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQ-----RALLYESMEKYKL 473 (503)
Q Consensus 419 d~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyr-----lA~Ay~~LGdyee 473 (503)
+.++.++-+|.+++..++|.+|.+++.+|++..|.......+ +-.+-+.+|++..
T Consensus 12 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~ 71 (203)
T 3t5x_A 12 QRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPT 71 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 457778889999999999999999999999998866433322 2334466777643
No 289
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=56.57 E-value=17 Score=37.59 Aligned_cols=31 Identities=16% Similarity=0.306 Sum_probs=19.1
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 419 TMMEVLSTRASCYKEVGEYKKAVADCSKVLE 449 (503)
Q Consensus 419 d~A~aysNrAlcylrLGdyeeALedaekALk 449 (503)
....++..+|.+|+.++++++|++.++++|.
T Consensus 194 tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 194 NRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 3445556666666666666666666666654
No 290
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=56.42 E-value=49 Score=37.69 Aligned_cols=75 Identities=12% Similarity=-0.006 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHH-----------------HHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHH
Q 010705 382 AAAKNKGVDNQKAGQYADAIKWLSWAVIL-----------------LEKSGDMATMMEVLSTRASCYKEVGEYKKAVADC 444 (503)
Q Consensus 382 ~alk~lGn~~fkqGDY~eAIk~YeKALeL-----------------~pk~~ddpd~A~aysNrAlcylrLGdyeeALeda 444 (503)
..-+.+|.+++..|++++|.++|++|-.- +............|.....++.+.+-|+-+++.+
T Consensus 841 ~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA 920 (950)
T 4gq2_M 841 IAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFS 920 (950)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 34578999999999999999999876521 1111112234457788899999999999999999
Q ss_pred HHHHHcC-CCCHH
Q 010705 445 SKVLEQD-DTNVS 456 (503)
Q Consensus 445 ekALkLd-Pd~~k 456 (503)
+.||..- +++..
T Consensus 921 ~lAI~~~~~dd~~ 933 (950)
T 4gq2_M 921 LLADASKETDDED 933 (950)
T ss_dssp HHHHHTCCSCCHH
T ss_pred HHHHhhcccCCcc
Confidence 9999754 44443
No 291
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=56.35 E-value=46 Score=33.92 Aligned_cols=95 Identities=9% Similarity=0.028 Sum_probs=63.7
Q ss_pred HHHHhCCHHHHHHHHHHHHHHHHh----cC-------CChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCC
Q 010705 390 DNQKAGQYADAIKWLSWAVILLEK----SG-------DMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ-----DDT 453 (503)
Q Consensus 390 ~~fkqGDY~eAIk~YeKALeL~pk----~~-------ddpd~A~aysNrAlcylrLGdyeeALedaekALkL-----dPd 453 (503)
+.....+..+|++++++..+.... .. .......+...++.+|+..++.++|...++++-.+ +.+
T Consensus 85 ~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~ 164 (393)
T 4b4t_O 85 SLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIP 164 (393)
T ss_dssp HHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred HHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCcc
Confidence 344567889999998876432211 00 01223445567888999999999999999998753 111
Q ss_pred ---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 010705 454 ---NVSVLVQRALLYESMEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 454 ---~~kAlyrlA~Ay~~LGdyeeAle~LqkALkL 484 (503)
+...|+..+..|...++|.++..++..++..
T Consensus 165 ~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~ 198 (393)
T 4b4t_O 165 LRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLST 198 (393)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 1334444577778889999988888887763
No 292
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=55.99 E-value=55 Score=28.27 Aligned_cols=20 Identities=20% Similarity=0.253 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHcCCCCHH
Q 010705 437 YKKAVADCSKVLEQDDTNVS 456 (503)
Q Consensus 437 yeeALedaekALkLdPd~~k 456 (503)
|.+|+++|.+++++.+.+.+
T Consensus 41 Y~~Aie~l~~alk~e~~~~~ 60 (117)
T 2cpt_A 41 YQHAVQYFLHVVKYEAQGDK 60 (117)
T ss_dssp HHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHHHHhccCCHH
Confidence 45555666666666644443
No 293
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=55.49 E-value=35 Score=33.13 Aligned_cols=52 Identities=8% Similarity=0.014 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHh--cCCChhhHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 010705 398 ADAIKWLSWAVILLEK--SGDMATMMEVLSTRASCYKE-VGEYKKAVADCSKVLE 449 (503)
Q Consensus 398 ~eAIk~YeKALeL~pk--~~ddpd~A~aysNrAlcylr-LGdyeeALedaekALk 449 (503)
+.|.+.|++|+++... .+-.|....+..|.+..|++ +++.++|++.+++++.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4566777777777643 23355566666666666665 6777777777776653
No 294
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=55.06 E-value=19 Score=37.51 Aligned_cols=32 Identities=16% Similarity=0.131 Sum_probs=27.7
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 418 ATMMEVLSTRASCYKEVGEYKKAVADCSKVLE 449 (503)
Q Consensus 418 pd~A~aysNrAlcylrLGdyeeALedaekALk 449 (503)
.....++..++.+|+.++++++|+++++++|.
T Consensus 188 ~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 188 PNTDVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 45677888899999999999999999999874
No 295
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=54.52 E-value=44 Score=27.62 Aligned_cols=20 Identities=15% Similarity=0.280 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHcCCCCHH
Q 010705 437 YKKAVADCSKVLEQDDTNVS 456 (503)
Q Consensus 437 yeeALedaekALkLdPd~~k 456 (503)
|.+|++.|.++++..++...
T Consensus 38 Y~~Aie~l~~alk~e~~~~~ 57 (93)
T 1wfd_A 38 YQEGIDMLLQVLKGTKESSK 57 (93)
T ss_dssp HHHHHHHHHHHHHTCCCHHH
T ss_pred HHHHHHHHHHHHHHCCCHHH
Confidence 45566666666666655443
No 296
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=52.49 E-value=16 Score=37.92 Aligned_cols=31 Identities=23% Similarity=0.408 Sum_probs=21.2
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 419 TMMEVLSTRASCYKEVGEYKKAVADCSKVLE 449 (503)
Q Consensus 419 d~A~aysNrAlcylrLGdyeeALedaekALk 449 (503)
....++..+|.+|+.++++++|+++++++|.
T Consensus 200 tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 230 (477)
T 3mcx_A 200 NYWAAQALLSRVYLNMGEYQKAYDAATDVIK 230 (477)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 4455666677777777777777777777765
No 297
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=50.75 E-value=25 Score=36.51 Aligned_cols=54 Identities=17% Similarity=0.054 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHhcC-----------------CChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Q 010705 397 YADAIKWLSWAVILLEKSG-----------------DMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ 450 (503)
Q Consensus 397 Y~eAIk~YeKALeL~pk~~-----------------ddpd~A~aysNrAlcylrLGdyeeALedaekALkL 450 (503)
|+.-++-+++|+.+++... .......++..+|.+|+.++++++|++.++++|..
T Consensus 156 y~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~~r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 156 LSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQGKLFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCccccccccccccccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 4445556677777665321 13346678888999999999999999999999964
No 298
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=50.38 E-value=45 Score=32.87 Aligned_cols=52 Identities=8% Similarity=0.039 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHh--cCCChhhHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 010705 398 ADAIKWLSWAVILLEK--SGDMATMMEVLSTRASCYKE-VGEYKKAVADCSKVLE 449 (503)
Q Consensus 398 ~eAIk~YeKALeL~pk--~~ddpd~A~aysNrAlcylr-LGdyeeALedaekALk 449 (503)
+.|.+.|++|+++... .+-.|....+..|.+..|+. +++.++|++.+++++.
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4688889999988754 34467777777888888777 6889999998888773
No 299
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=50.27 E-value=31 Score=27.91 Aligned_cols=12 Identities=33% Similarity=0.088 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHH
Q 010705 399 DAIKWLSWAVIL 410 (503)
Q Consensus 399 eAIk~YeKALeL 410 (503)
.|+++.++|++.
T Consensus 10 ~Ai~lv~~Ave~ 21 (83)
T 2v6y_A 10 MARKYAILAVKA 21 (83)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 566666666655
No 300
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=49.66 E-value=44 Score=33.00 Aligned_cols=51 Identities=18% Similarity=0.133 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHh--cCCChhhHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 010705 398 ADAIKWLSWAVILLEK--SGDMATMMEVLSTRASCYKE-VGEYKKAVADCSKVLE 449 (503)
Q Consensus 398 ~eAIk~YeKALeL~pk--~~ddpd~A~aysNrAlcylr-LGdyeeALedaekALk 449 (503)
+.|.+.|++|+++. . .+-.|....+..|.+..|++ +++.++|++.+++|+.
T Consensus 173 e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45667788887776 3 22245556666667666666 6777777777777664
No 301
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=49.34 E-value=48 Score=32.77 Aligned_cols=51 Identities=8% Similarity=-0.003 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHh--cCCChhhHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 010705 398 ADAIKWLSWAVILLEK--SGDMATMMEVLSTRASCYKE-VGEYKKAVADCSKVL 448 (503)
Q Consensus 398 ~eAIk~YeKALeL~pk--~~ddpd~A~aysNrAlcylr-LGdyeeALedaekAL 448 (503)
+.|.+.|++|+++..+ .+-.|....+..|.+..|++ +++.++|++.+++|+
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AF 226 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 226 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3455556666655432 12244444555555555554 455666655555544
No 302
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=48.99 E-value=50 Score=32.39 Aligned_cols=52 Identities=12% Similarity=0.015 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHh--cCCChhhHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 010705 398 ADAIKWLSWAVILLEK--SGDMATMMEVLSTRASCYKE-VGEYKKAVADCSKVLE 449 (503)
Q Consensus 398 ~eAIk~YeKALeL~pk--~~ddpd~A~aysNrAlcylr-LGdyeeALedaekALk 449 (503)
+.|.+.|++|+++..+ .+-.|....+..|.+..|+. +++.++|++.+++|+.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 5677888888887653 23356666777777777766 7888888888877764
No 303
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.85 E-value=12 Score=32.86 Aligned_cols=15 Identities=13% Similarity=0.224 Sum_probs=8.8
Q ss_pred CHHHHHHHHHHHHHH
Q 010705 396 QYADAIKWLSWAVIL 410 (503)
Q Consensus 396 DY~eAIk~YeKALeL 410 (503)
.|++|.++..+||.+
T Consensus 18 ~h~~AF~~Is~AL~~ 32 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNT 32 (116)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhh
Confidence 455566666666655
No 304
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=48.12 E-value=23 Score=36.59 Aligned_cols=48 Identities=8% Similarity=0.047 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHcCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 010705 437 YKKAVADCSKVLEQDDT--------NVSVLVQRALLYESMEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 437 yeeALedaekALkLdPd--------~~kAlyrlA~Ay~~LGdyeeAle~LqkALkL 484 (503)
|+..+++++.|+.+-|. ..-|+-.+|.+|+.+++|++|++++++++..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 46677777777766443 2347778899999999999999999999863
No 305
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=47.58 E-value=36 Score=31.74 Aligned_cols=101 Identities=10% Similarity=-0.027 Sum_probs=64.4
Q ss_pred CcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Q 010705 377 AGVTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVS 456 (503)
Q Consensus 377 ~~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~k 456 (503)
....+.-++-+|..++.+++|.+|.+.+.+|++.+++.. ......++.-+-.|-+.+|++.. .+.+++ .+. .
T Consensus 10 ~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~-~~~k~~IL~yLIp~~Ll~G~iP~-~~ll~~----~~~--~ 81 (203)
T 3t5x_A 10 TAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS-QKNKRMILIYLLPVKMLLGHMPT-VELLKK----YHL--M 81 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC-HHHHHHHHHHHHHHHHHTTCEEC-HHHHHH----TTC--G
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH-HHHHHHHHHHHHHHHHHcCCCCC-HHHhhh----Cch--h
Confidence 345666778899999999999999999999998865432 23444555556667777888643 223322 111 2
Q ss_pred HHHHHHHHHHH--cCCHHHHHHHHHHHHHhC
Q 010705 457 VLVQRALLYES--MEKYKLGAEDLRTVLKID 485 (503)
Q Consensus 457 AlyrlA~Ay~~--LGdyeeAle~LqkALkLD 485 (503)
.+..+..|+.. +..++++++..++.+..+
T Consensus 82 ~y~~L~~Avr~Gdl~~f~~~l~~~~~~f~~~ 112 (203)
T 3t5x_A 82 QFAEVTRAVSEGNLLLLHEALAKHEAFFIRC 112 (203)
T ss_dssp GGHHHHHHHHHTCHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHhHHHHHHC
Confidence 46666655543 334666666666555443
No 306
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=47.54 E-value=33 Score=27.96 Aligned_cols=13 Identities=31% Similarity=0.008 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHHH
Q 010705 398 ADAIKWLSWAVIL 410 (503)
Q Consensus 398 ~eAIk~YeKALeL 410 (503)
..|+++..+|++.
T Consensus 17 ~~Ai~lv~~Ave~ 29 (83)
T 2w2u_A 17 EMARKYAINAVKA 29 (83)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3455555555544
No 307
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=46.52 E-value=86 Score=34.20 Aligned_cols=97 Identities=4% Similarity=-0.144 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 010705 384 AKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRAL 463 (503)
Q Consensus 384 lk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~ 463 (503)
+...+...+.+.+.+.|...|.+..+.. .-.+.....++..++.-++..+...++...+.+.+....+......+.+.
T Consensus 217 ~~~~~~~rlar~d~~~A~~~~~~~~~~~--~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~ 294 (618)
T 1qsa_A 217 MAAVAFASVARQDAENARLMIPSLAQAQ--QLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRM 294 (618)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHhhhhcc--CCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHH
Confidence 3344556666778888988887765421 11122223334334444444443567777887776654443333344444
Q ss_pred HHHHcCCHHHHHHHHHHHHH
Q 010705 464 LYESMEKYKLGAEDLRTVLK 483 (503)
Q Consensus 464 Ay~~LGdyeeAle~LqkALk 483 (503)
++ ..++++.|..+|+++-.
T Consensus 295 Al-r~~d~~~a~~~~~~l~~ 313 (618)
T 1qsa_A 295 AL-GTGDRRGLNTWLARLPM 313 (618)
T ss_dssp HH-HHTCHHHHHHHHHHSCT
T ss_pred HH-HCCCHHHHHHHHHHccc
Confidence 44 56999999999976544
No 308
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=46.39 E-value=62 Score=29.90 Aligned_cols=37 Identities=19% Similarity=0.144 Sum_probs=30.7
Q ss_pred HHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 010705 448 LEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 448 LkLdPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkL 484 (503)
+.-.+-.+..++.+|.+|.++|+..+|-+.+.+|-+.
T Consensus 118 l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 118 LKNNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp C--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred hccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 3444556999999999999999999999999998764
No 309
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=46.22 E-value=32 Score=37.70 Aligned_cols=50 Identities=20% Similarity=0.152 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCH
Q 010705 422 EVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKY 471 (503)
Q Consensus 422 ~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~~LGdy 471 (503)
.....++...+..|+|.-|.+.+++++..+|++.++...++.+|..++.-
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 44566788889999999999999999999999999999999999998853
No 310
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=45.82 E-value=61 Score=35.04 Aligned_cols=12 Identities=42% Similarity=0.592 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHH
Q 010705 437 YKKAVADCSKVL 448 (503)
Q Consensus 437 yeeALedaekAL 448 (503)
|++|+++++++-
T Consensus 455 Y~~Ai~~L~k~~ 466 (526)
T 2wb7_A 455 YKAAINDLQKAA 466 (526)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHhhh
Confidence 455555555544
No 311
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=45.42 E-value=25 Score=36.37 Aligned_cols=48 Identities=13% Similarity=0.124 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHcCCCC--------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 010705 437 YKKAVADCSKVLEQDDTN--------VSVLVQRALLYESMEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 437 yeeALedaekALkLdPd~--------~kAlyrlA~Ay~~LGdyeeAle~LqkALkL 484 (503)
|+..+++++.|+.+-|.. .-|+-.+|.+|+.+++|++|++++++++..
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 356677777777654432 347778899999999999999999999863
No 312
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=45.11 E-value=33 Score=36.05 Aligned_cols=30 Identities=10% Similarity=0.210 Sum_probs=15.4
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 420 MMEVLSTRASCYKEVGEYKKAVADCSKVLE 449 (503)
Q Consensus 420 ~A~aysNrAlcylrLGdyeeALedaekALk 449 (503)
...++..+|.+|+..+++++|++.++++|.
T Consensus 181 k~aA~allarv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 181 KGAAYALKSRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555555555555555555553
No 313
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=44.35 E-value=44 Score=34.99 Aligned_cols=49 Identities=16% Similarity=0.113 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHcCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 010705 437 YKKAVADCSKVLEQDDTN-----------VSVLVQRALLYESMEKYKLGAEDLRTVLKID 485 (503)
Q Consensus 437 yeeALedaekALkLdPd~-----------~kAlyrlA~Ay~~LGdyeeAle~LqkALkLD 485 (503)
|+..+++++.|+.+-|.. .-|+-.+|.+|+.+++|++|++++++++...
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 456677777777655421 3377788999999999999999999999764
No 314
>3dza_A Uncharacterized putative membrane protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=43.93 E-value=1.8e+02 Score=27.48 Aligned_cols=103 Identities=16% Similarity=-0.052 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcC-----------C-------------------C---hhhHHHHHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSG-----------D-------------------M---ATMMEVLSTR 427 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~-----------d-------------------d---pd~A~aysNr 427 (503)
+..-..+++...-.|+.+.|.+++.+|..++.... . + ..........
T Consensus 35 A~~DI~~AR~aL~~G~~~~Ak~lL~~A~~~L~~a~~d~~~f~ka~~k~~~~~~~~iPI~~~l~v~edf~~tpeK~aAI~~ 114 (191)
T 3dza_A 35 AMRDIQFARLALFHGQPDSAKKLTDDAAALLAADDASWAKFVKTDAKAKMIADRYVIINASIALSEDYVATPEKESAIQS 114 (191)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTSCHHHHHTTBCTTCCCCSSSSCEEEEEEEEEEECCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhchHHHHhhcccCCCCCCceEEEcceeeeeccccCChHHHHHHHH
Confidence 44445677888889999999999999987765410 0 0 0123456668
Q ss_pred HHHHHHcCCHHHHHHHHHHHH-------HcCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 428 ASCYKEVGEYKKAVADCSKVL-------EQDD-TNVSVLVQRALLYESMEKYKLGAEDLRTVLK 483 (503)
Q Consensus 428 AlcylrLGdyeeALedaekAL-------kLdP-d~~kAlyrlA~Ay~~LGdyeeAle~LqkALk 483 (503)
+.-+++.|+-++|++.++-+= .+-| ........++..|+..++|.+|-..|..+..
T Consensus 115 AN~~Lk~Gd~~~A~~~LklAgvdv~~~~allPL~qT~~~V~~A~~ll~~gk~yeAn~aLk~Aed 178 (191)
T 3dza_A 115 ANEKLAKGDQKGAIDTLRLAGIGVIENQYLMPLNQTRKAVAQSQELLKAGKYYEANLVLKGAEE 178 (191)
T ss_dssp HHHHHHTTCHHHHHHHHHHTTCEEEEEEEEEEHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHcCCchhhhhhhCChHhHHHHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 899999999999999887642 1113 2355778899999999999999999988764
No 315
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=43.91 E-value=1.3e+02 Score=31.04 Aligned_cols=43 Identities=16% Similarity=0.196 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 456 SVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 456 kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
+.++..|.++...|+++.|+++++.+ -.++.++..+..|+...
T Consensus 337 ~~~~eYA~lLA~qG~l~~A~~yL~~l---p~~~~~~~~lr~Rl~~a 379 (399)
T 2pm7_A 337 AKFLEFINLTTSTGNFELATEFLNSL---PSDNEEVKTEKARVLIA 379 (399)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHS---CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHhC---CCCChhHHHHHHHHHHh
Confidence 34556699999999999999998632 22446666666666543
No 316
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=43.27 E-value=69 Score=31.14 Aligned_cols=51 Identities=10% Similarity=-0.035 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHh--cCCChhhHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 010705 398 ADAIKWLSWAVILLEK--SGDMATMMEVLSTRASCYKE-VGEYKKAVADCSKVL 448 (503)
Q Consensus 398 ~eAIk~YeKALeL~pk--~~ddpd~A~aysNrAlcylr-LGdyeeALedaekAL 448 (503)
+.|.+.|++|+++..+ .+-.|....+..|.+..|++ +++.++|++.+++|+
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTF 203 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4567778888776543 23356666666667666664 577777777777665
No 317
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=42.97 E-value=26 Score=36.25 Aligned_cols=49 Identities=20% Similarity=0.285 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHcCCCC--------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 010705 437 YKKAVADCSKVLEQDDTN--------VSVLVQRALLYESMEKYKLGAEDLRTVLKID 485 (503)
Q Consensus 437 yeeALedaekALkLdPd~--------~kAlyrlA~Ay~~LGdyeeAle~LqkALkLD 485 (503)
|+..+++++.|+.+-|.. .-|+-.+|.+|+.+++|++|++++++++...
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 466778888887765432 3477788999999999999999999998753
No 318
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=42.80 E-value=1.5e+02 Score=35.01 Aligned_cols=65 Identities=12% Similarity=-0.090 Sum_probs=53.2
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 010705 420 MMEVLSTRASCYKEVGEYKKAVADCSKVLEQ----DDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 420 ~A~aysNrAlcylrLGdyeeALedaekALkL----dPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkL 484 (503)
....|.-+-.+|.+.|+.++|++.+++..+. -.-+...|..+-..|...|++++|++.|+++.+.
T Consensus 126 ~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~ 194 (1134)
T 3spa_A 126 QQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDA 194 (1134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHc
Confidence 3446777889999999999999999765432 2236778888899999999999999999998774
No 319
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=41.00 E-value=36 Score=29.03 Aligned_cols=30 Identities=23% Similarity=0.297 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 420 MMEVLSTRASCYKEVGEYKKAVADCSKVLE 449 (503)
Q Consensus 420 ~A~aysNrAlcylrLGdyeeALedaekALk 449 (503)
.+..+..++..+++.|+|++||+..+++..
T Consensus 14 ~AH~~~RrAe~ll~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 14 LAHQQSRRADRLLAAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhHhhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 356778899999999999999988877663
No 320
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=40.29 E-value=96 Score=25.25 Aligned_cols=13 Identities=38% Similarity=0.233 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHH
Q 010705 398 ADAIKWLSWAVIL 410 (503)
Q Consensus 398 ~eAIk~YeKALeL 410 (503)
..|+++..+|++.
T Consensus 14 ~~A~~lv~~Ave~ 26 (86)
T 4a5x_A 14 TAAATVLKRAVEL 26 (86)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4566666666655
No 321
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=40.28 E-value=26 Score=36.55 Aligned_cols=53 Identities=17% Similarity=0.124 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHhcC--CChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 397 YADAIKWLSWAVILLEKSG--DMATMMEVLSTRASCYKEVGEYKKAVADCSKVLE 449 (503)
Q Consensus 397 Y~eAIk~YeKALeL~pk~~--ddpd~A~aysNrAlcylrLGdyeeALedaekALk 449 (503)
|+.-++-+++|+.+++... .......++..++.+|+.++++++|++.+++++.
T Consensus 154 y~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 154 WAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3344445555555544321 1234556777778888888888888888877763
No 322
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=40.22 E-value=46 Score=35.21 Aligned_cols=29 Identities=10% Similarity=0.132 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 421 MEVLSTRASCYKEVGEYKKAVADCSKVLE 449 (503)
Q Consensus 421 A~aysNrAlcylrLGdyeeALedaekALk 449 (503)
..++..+|.+|+..+++++|++.++++|.
T Consensus 198 ~aA~allarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 198 QAALAFLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 34444455555555555555555555543
No 323
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=39.99 E-value=34 Score=28.96 Aligned_cols=30 Identities=13% Similarity=0.159 Sum_probs=20.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Q 010705 426 TRASCYKEVGEYKKAVADCSKVLEQDDTNV 455 (503)
Q Consensus 426 NrAlcylrLGdyeeALedaekALkLdPd~~ 455 (503)
.+|..++..|+++.|+.++-+||+..|...
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~ 54 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQ 54 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHH
Confidence 467777777777777777777777666443
No 324
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=38.96 E-value=72 Score=33.67 Aligned_cols=105 Identities=10% Similarity=-0.158 Sum_probs=61.3
Q ss_pred cchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-HHhcCC----ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 010705 378 GVTGAAAKNKGVDNQKAGQYADAIKWLSWAVIL-LEKSGD----MATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDD 452 (503)
Q Consensus 378 ~~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL-~pk~~d----dpd~A~aysNrAlcylrLGdyeeALedaekALkLdP 452 (503)
...+.-++-.|..++.+.+|.+|.+.+.+|++. ++.... ......++.-+--|.+-+|++..-. .+++- .++
T Consensus 217 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~~~~~~~~~n~~~ILkyLIpv~LLlG~~P~~~-ll~k~--~~~ 293 (455)
T 3t5v_B 217 DQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLPLTNQAITRNGTRILNYMIPTGLILGKMVKWG-PLRPF--LSQ 293 (455)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHTTCCBCHH-HHGGG--SCH
T ss_pred cceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCccccchhhhhHHHHHHHHHHHHHHHcCCCCCHH-HHccc--chH
Confidence 346677788999999999999999999999998 775321 1222334444555666677653211 12111 011
Q ss_pred CCHHH-HHHHHHHHHH--cCCHHHHHHHHHHHHHhCC
Q 010705 453 TNVSV-LVQRALLYES--MEKYKLGAEDLRTVLKIDP 486 (503)
Q Consensus 453 d~~kA-lyrlA~Ay~~--LGdyeeAle~LqkALkLDP 486 (503)
.... |..+..|+.. +..++++++.+++.+..+-
T Consensus 294 -~L~~~y~~L~~AVr~Gdl~~F~~~L~~~~~~f~~~g 329 (455)
T 3t5v_B 294 -ETIDNWSVLYKHVRYGNIQGVSLWLRQNERHLCARQ 329 (455)
T ss_dssp -HHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHHTT
T ss_pred -HHHHHHHHHHHHHHhCCHHHHHHHHHHhHHHHHHcC
Confidence 1222 4444444433 2346667766666665553
No 325
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=38.54 E-value=1.2e+02 Score=27.76 Aligned_cols=29 Identities=14% Similarity=0.092 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVI 409 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALe 409 (503)
....+..+..+|..++|-+|-+.++.+=.
T Consensus 32 ~~~~~~~~i~lFn~g~yfeaHEvLEe~W~ 60 (161)
T 2ijq_A 32 LRRAVVHGVRLYNSGEFHESHDCFEDEWY 60 (161)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 45568888888888888888887777654
No 326
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=36.43 E-value=70 Score=31.77 Aligned_cols=53 Identities=8% Similarity=0.049 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHhc----CCChhhHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHc
Q 010705 398 ADAIKWLSWAVILLEKS----GDMATMMEVLSTRASCYKE-VGEYKKAVADCSKVLEQ 450 (503)
Q Consensus 398 ~eAIk~YeKALeL~pk~----~ddpd~A~aysNrAlcylr-LGdyeeALedaekALkL 450 (503)
+.|.+.|++|+++..+. +-.|....+..|.+..|++ +++.++|++.+++|+.-
T Consensus 169 e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 44556666666654321 2244445555555555553 56666666666666543
No 327
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=35.96 E-value=1.3e+02 Score=23.97 Aligned_cols=13 Identities=23% Similarity=0.266 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHH
Q 010705 398 ADAIKWLSWAVIL 410 (503)
Q Consensus 398 ~eAIk~YeKALeL 410 (503)
..|+.+..+|++.
T Consensus 11 ~~A~~l~~~Av~~ 23 (85)
T 2v6x_A 11 TKGIELVQKAIDL 23 (85)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3556666666544
No 328
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=35.32 E-value=65 Score=29.54 Aligned_cols=53 Identities=19% Similarity=0.134 Sum_probs=24.6
Q ss_pred HHHcCCHHHHHHHHHHHHHcCCCC------HHHHHH-HHHHHH--HcCCHHHHHHHHHHHHH
Q 010705 431 YKEVGEYKKAVADCSKVLEQDDTN------VSVLVQ-RALLYE--SMEKYKLGAEDLRTVLK 483 (503)
Q Consensus 431 ylrLGdyeeALedaekALkLdPd~------~kAlyr-lA~Ay~--~LGdyeeAle~LqkALk 483 (503)
++..|+|=+|-+.++.+-+..+.. .+.++. +|.+++ ..++.+-|...|.+++.
T Consensus 42 lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 42 LYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 334445555555555554443322 334444 433332 23555555555555554
No 329
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=33.39 E-value=3e+02 Score=27.79 Aligned_cols=70 Identities=11% Similarity=0.000 Sum_probs=52.5
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCC--hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDM--ATMMEVLSTRASCYKEVGEYKKAVADCSKVLE 449 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~dd--pd~A~aysNrAlcylrLGdyeeALedaekALk 449 (503)
...+....+..|+..++..+|.++++++-.++....+. ...+..|..++..|...++|.++..++-..+.
T Consensus 126 ~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 126 ILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 44455677899999999999999999998877764432 24566677788888888998887766655553
No 330
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.36 E-value=62 Score=28.38 Aligned_cols=27 Identities=22% Similarity=0.315 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 010705 383 AAKNKGVDNQKAGQYADAIKWLSWAVI 409 (503)
Q Consensus 383 alk~lGn~~fkqGDY~eAIk~YeKALe 409 (503)
.+.+.|..+-..++-++|+++|++.|.
T Consensus 24 ~~Is~AL~~DE~g~k~~Al~lYk~GI~ 50 (116)
T 2dl1_A 24 LFVNKGLNTDELGQKEEAKNYYKQGIG 50 (116)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhcCCHHHHHHHHHHHHH
Confidence 333444444444444455555444443
No 331
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=31.54 E-value=74 Score=32.91 Aligned_cols=48 Identities=13% Similarity=0.012 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHcCCC-----------------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 010705 437 YKKAVADCSKVLEQDDT-----------------------NVSVLVQRALLYESMEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 437 yeeALedaekALkLdPd-----------------------~~kAlyrlA~Ay~~LGdyeeAle~LqkALkL 484 (503)
|+..+++++.|+.+-|. ..-|+-.+|.+|+.+++|++|++++++++..
T Consensus 156 y~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~~r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 156 LSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQGKLFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCccccccccccccccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 45667777777765432 1236777899999999999999999999864
No 332
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=30.86 E-value=48 Score=34.43 Aligned_cols=47 Identities=13% Similarity=-0.048 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHcCC-------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 010705 438 KKAVADCSKVLEQDD-------------TNVSVLVQRALLYESMEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 438 eeALedaekALkLdP-------------d~~kAlyrlA~Ay~~LGdyeeAle~LqkALkL 484 (503)
+..++++++|+.+-| ...-|+-.+|.+|+.+++|++|+++.++++..
T Consensus 161 ~~I~~DL~~A~~~L~~~~~~~~~~~gr~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 161 QQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHTTTCCCCSGGGTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhcccccCCccccCcccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 455666666654322 12337777899999999999999999999864
No 333
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=30.71 E-value=1.5e+02 Score=29.95 Aligned_cols=30 Identities=10% Similarity=0.017 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 010705 455 VSVLVQRALLYESMEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 455 ~kAlyrlA~Ay~~LGdyeeAle~LqkALkL 484 (503)
..++|+.|..+...+++.+|+..|+.+++.
T Consensus 253 A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~ 282 (376)
T 3r9m_A 253 AYAYCYHGETLLASDKCGEAIRSLQEAEKL 282 (376)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 457788888888888998888888876654
No 334
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=30.12 E-value=80 Score=25.40 Aligned_cols=32 Identities=13% Similarity=0.170 Sum_probs=24.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Q 010705 426 TRASCYKEVGEYKKAVADCSKVLEQDDTNVSV 457 (503)
Q Consensus 426 NrAlcylrLGdyeeALedaekALkLdPd~~kA 457 (503)
.+|..++..|++++|+.++-+||+..|...+.
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~L 53 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQL 53 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHH
Confidence 46777788888888888888888888766543
No 335
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=29.28 E-value=60 Score=34.01 Aligned_cols=47 Identities=13% Similarity=0.044 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHcCCC-----------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 010705 438 KKAVADCSKVLEQDDT-----------NVSVLVQRALLYESMEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 438 eeALedaekALkLdPd-----------~~kAlyrlA~Ay~~LGdyeeAle~LqkALkL 484 (503)
+..+++++.|+.+-|. ..-|+-.+|.+|+..++|++|++++++++..
T Consensus 154 ~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 154 DFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5566677777665442 1237778899999999999999999999864
No 336
>3ihv_A SUSD homolog; NP_813570.1, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=28.54 E-value=68 Score=33.61 Aligned_cols=29 Identities=14% Similarity=0.196 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHc--------CCHHHHHHHHHHHHH
Q 010705 421 MEVLSTRASCYKEV--------GEYKKAVADCSKVLE 449 (503)
Q Consensus 421 A~aysNrAlcylrL--------GdyeeALedaekALk 449 (503)
..++..+|.+|+.. +++++|++.++++|.
T Consensus 196 ~aA~allarvyL~~a~~~~~~~~~~~~A~~~a~~vi~ 232 (535)
T 3ihv_A 196 GAALGLLTKVYATWAGYPVKDESKWEAAAKTARILVE 232 (535)
T ss_dssp HHHHHHHHHHHHHHHSTTTCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCcccCHHHHHHHHHHHHHHHh
Confidence 34444445555443 345555555555553
No 337
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=27.66 E-value=13 Score=36.79 Aligned_cols=35 Identities=17% Similarity=0.249 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEK 413 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk 413 (503)
..|..+..+|..+-+.++|.+|+.+|.+||+++-.
T Consensus 21 ~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~ 55 (257)
T 2ymb_A 21 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQ 55 (257)
T ss_dssp -----------------------------------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 34666777888899999999999999999987543
No 338
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=26.88 E-value=1.8e+02 Score=34.95 Aligned_cols=51 Identities=6% Similarity=-0.023 Sum_probs=32.7
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhhh
Q 010705 451 DDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKMV 502 (503)
Q Consensus 451 dPd~~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~LqklL 502 (503)
+..+.+++.....-.+.+++|-.|++++.|+++-.| .++....+.++.+.|
T Consensus 1280 d~~d~k~~~~~~~~~~~~~~~g~~~k~l~k~~~~k~-~~~~~~~~~~~~~~l 1330 (1354)
T 3lxu_X 1280 DANDSKAIQFALWHAYAHGHYGRMYKYVVKLIEEKR-TRDHFVELAAINGAL 1330 (1354)
T ss_dssp CTTSTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHTC-CHHHHHHHHHHHHHH
T ss_pred ccCCceeehhHHHHHHHHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHc
Confidence 344555443333333368899999999999998876 555556666665544
No 339
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=26.72 E-value=2.7e+02 Score=24.26 Aligned_cols=82 Identities=16% Similarity=0.052 Sum_probs=50.4
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 010705 386 NKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLY 465 (503)
Q Consensus 386 ~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay 465 (503)
.++....-....++|..+-+..... + ....+-.-|...++..|+|++|+...+... ++..---++.|-
T Consensus 12 E~AL~gTG~H~HqEA~tIAdwL~~~----~---~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce 79 (116)
T 2p58_C 12 EIALIGTGNHYHEEANCIAEWLHLK----G---EEEAVQLIRLSSLMNRGDYASALQQGNKLA-----YPDLEPWLALCE 79 (116)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHT----T---CHHHHHHHHHHHHHHTTCHHHHHHHHTTSC-----CGGGHHHHHHHH
T ss_pred HHHHHHccchHHHHHHHHHHHHHhC----C---cHHHHHHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHH
Confidence 3344444455677777665544322 1 122333446677889999999988764422 455555567777
Q ss_pred HHcCCHHHHHHHHH
Q 010705 466 ESMEKYKLGAEDLR 479 (503)
Q Consensus 466 ~~LGdyeeAle~Lq 479 (503)
.++|--.++...+.
T Consensus 80 ~rlGl~s~le~rL~ 93 (116)
T 2p58_C 80 YRLGLGSALESRLN 93 (116)
T ss_dssp HHHTCHHHHHHHHH
T ss_pred HhcccHHHHHHHHH
Confidence 88888777777763
No 340
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=26.64 E-value=4.5e+02 Score=25.55 Aligned_cols=117 Identities=14% Similarity=0.196 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc-CCChhh-HHHHHHHHHHHHHc--CC--------------HHHHHH
Q 010705 381 GAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKS-GDMATM-MEVLSTRASCYKEV--GE--------------YKKAVA 442 (503)
Q Consensus 381 A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~-~ddpd~-A~aysNrAlcylrL--Gd--------------yeeALe 442 (503)
.+-|...+..+|+.+++.+=.+.-.-+-.++... ...+.. ..++ ++.|+.+. |+ ++-|+-
T Consensus 16 lDfyf~~~c~aFR~~r~~dFrq~rdi~eall~~~l~~~~~~~k~ir--i~QfLsRI~eG~~LD~~Fd~~~~lTPLESAl~ 93 (235)
T 3bu8_A 16 LKFYFHEALRAFRGSRYGDFRQIRDIMQALLVRPLGKEHTVSRLLR--VMQCLSRIEEGENLDCSFDMEAELTPLESAIN 93 (235)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCCCCCHHHHHHHH--HHHHHHHHHTTTCTTEECSSSTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHhCcccccccchhHHH--HHHHHHHHHcCCCCCcccCCCCCCChHHHHHH
Confidence 3456677888999998877544433322222111 111111 1122 33444332 11 566777
Q ss_pred HHHHHHHcCCCCHH------HHHH--HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010705 443 DCSKVLEQDDTNVS------VLVQ--RALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLT 499 (503)
Q Consensus 443 daekALkLdPd~~k------Alyr--lA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lq 499 (503)
.++..-+-.+-.-+ -++. ...+++..|+|++|.+.|++.+.-++.+...+..|..+-
T Consensus 94 v~~~I~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II 158 (235)
T 3bu8_A 94 VLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNII 158 (235)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHH
T ss_pred HHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHH
Confidence 76665554432221 2222 255678899999999999999998887777777666553
No 341
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=26.25 E-value=3.4e+02 Score=23.96 Aligned_cols=31 Identities=10% Similarity=-0.048 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVIL 410 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL 410 (503)
.+..|...|..++.+||.-+|-+.|-+|++.
T Consensus 6 lAe~yL~EA~ell~kGD~vQAsEK~ykAaee 36 (129)
T 2jpu_A 6 SAEVYYEEAEEFLSKGDLVQACEKYYKAAEE 36 (129)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 5778999999999999999999998888865
No 342
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=25.87 E-value=1.9e+02 Score=24.59 Aligned_cols=47 Identities=11% Similarity=0.068 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH----HHHHHHHhhh
Q 010705 455 VSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIAR----STIHRLTKMV 502 (503)
Q Consensus 455 ~kAlyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk----~~La~LqklL 502 (503)
++.++..|.-++.+++|.+|+..|++++.+. +|+++. ..+.+|.+.+
T Consensus 53 ~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t-en~~i~ki~~fyl~ec~kkl 103 (106)
T 2vkj_A 53 ARSLIAEGKDLFETANYGEALVFFEKALNLS-DNEEIKKIASFYLEECRKKL 103 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHccc-cCHHHHHHHHHHHHHHHHHh
Confidence 4455666777888888888888888887653 454443 3445665543
No 343
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=25.84 E-value=5e+02 Score=25.80 Aligned_cols=85 Identities=15% Similarity=0.085 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCCHHHH
Q 010705 384 AKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQ-----DDTNVSVL 458 (503)
Q Consensus 384 lk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkL-----dPd~~kAl 458 (503)
...+-......|+|-||.+.|+-.....-+..+..+-.++++.-+..+++.+++.-|...+...++. .+-+....
T Consensus 16 ~l~rl~~~I~~G~yYEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~ 95 (312)
T 2wpv_A 16 TLQRFENKIKAGDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISV 95 (312)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHH
T ss_pred HHHHHHHHhhccChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHH
Confidence 3444556678899999999988776544333334455667777888888888888887776555543 13344455
Q ss_pred HHHHHHHHHc
Q 010705 459 VQRALLYESM 468 (503)
Q Consensus 459 yrlA~Ay~~L 468 (503)
-++..++...
T Consensus 96 ~rl~~l~~~~ 105 (312)
T 2wpv_A 96 ARLVRLIAEL 105 (312)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHHC
Confidence 5556555553
No 344
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=25.61 E-value=50 Score=34.42 Aligned_cols=47 Identities=11% Similarity=0.089 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHcCCCC--------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 437 YKKAVADCSKVLEQDDTN--------VSVLVQRALLYESMEKYKLGAEDLRTVLK 483 (503)
Q Consensus 437 yeeALedaekALkLdPd~--------~kAlyrlA~Ay~~LGdyeeAle~LqkALk 483 (503)
|+..+++++.|+.+-|.. .-|+-.+|.+|+.+++|++|++.+++++.
T Consensus 154 y~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 154 WAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 566778888888765431 33777789999999999999999998874
No 345
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=25.55 E-value=89 Score=25.88 Aligned_cols=25 Identities=16% Similarity=0.110 Sum_probs=17.2
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHH
Q 010705 386 NKGVDNQKAGQYADAIKWLSWAVIL 410 (503)
Q Consensus 386 ~lGn~~fkqGDY~eAIk~YeKALeL 410 (503)
..|..+|..++|-+|-+.++.+=.-
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~ 30 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLK 30 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhh
Confidence 4566777778887777777666543
No 346
>1o3u_A Conserved hypothetical protein TM0613; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.75A {Thermotoga maritima} SCOP: a.24.16.3
Probab=24.95 E-value=1.5e+02 Score=25.44 Aligned_cols=33 Identities=12% Similarity=-0.101 Sum_probs=25.2
Q ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 010705 379 VTGAAAKNKGVDNQKAGQYADAIKWLSWAVILL 411 (503)
Q Consensus 379 ~~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~ 411 (503)
..+......+..++..|+|..|.-..++|++..
T Consensus 14 ~~A~~dL~~A~~~l~~g~y~~a~F~aqQA~Eka 46 (135)
T 1o3u_A 14 DAAKDDLEHAKHDLEHGFYNWACFSSQQAAEKA 46 (135)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHH
Confidence 356666777888899999998887777777653
No 347
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=30.58 E-value=16 Score=40.47 Aligned_cols=44 Identities=14% Similarity=0.138 Sum_probs=24.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhh
Q 010705 458 LVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKM 501 (503)
Q Consensus 458 lyrlA~Ay~~LGdyeeAle~LqkALkLDPen~eAk~~La~Lqkl 501 (503)
.+.+|..++..|+|..|++.+..++..+|+|.+++..++.+.++
T Consensus 464 ~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~ 507 (668)
T 2yhe_A 464 VLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQ 507 (668)
Confidence 34445555555666666666666666666666555555555443
No 348
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=24.70 E-value=3.8e+02 Score=23.94 Aligned_cols=42 Identities=5% Similarity=-0.118 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhH
Q 010705 380 TGAAAKNKGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMM 421 (503)
Q Consensus 380 ~A~alk~lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A 421 (503)
.+..+...|.+|...||.+.|.-+|-+-+.|+.+.+..++..
T Consensus 41 sa~~L~r~A~~y~~EGd~E~AYilymRy~~L~~kIpkHpdyk 82 (144)
T 2a9u_A 41 SALKIFKTAEECRLDRDEERAYVLYMKYVTVYNLIKKRPDFK 82 (144)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTSHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhcCcchh
Confidence 456778889999999999999999999888876666555543
No 349
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=24.54 E-value=1.4e+02 Score=31.84 Aligned_cols=68 Identities=7% Similarity=-0.119 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010705 380 TGAAAKNKGVDNQKA--GQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVL 448 (503)
Q Consensus 380 ~A~alk~lGn~~fkq--GDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekAL 448 (503)
...++-++|+.-... -....++++|++||....+.=.+ .....|.-+|-++++.++|.+|++.+..+-
T Consensus 261 YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~-~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa 330 (489)
T 4gq4_A 261 YPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRD-EHIYPYMYLAGYHCRNRNVREALQAWADTA 330 (489)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTT-CCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhccc-CcccceeecchHHHHhhhHHHHHHHhhhhh
Confidence 344444555443222 12234677888888876542211 224556667999999999999999997764
No 350
>3ckc_A SUSD; TPR repeat, carbohydrate binding, starch binding, sugar BIND protein; HET: MES; 1.50A {Bacteroides thetaiotaomicron} SCOP: a.118.8.6 PDB: 3ck8_A* 3ck9_A* 3ckb_A* 3ck7_A*
Probab=24.42 E-value=66 Score=33.21 Aligned_cols=31 Identities=29% Similarity=0.269 Sum_probs=20.3
Q ss_pred hhHHHHHHHHHHHHHc------CCHHHHHHHHHHHHH
Q 010705 419 TMMEVLSTRASCYKEV------GEYKKAVADCSKVLE 449 (503)
Q Consensus 419 d~A~aysNrAlcylrL------GdyeeALedaekALk 449 (503)
....++..+|.+|+.. +++++|++.++++|.
T Consensus 195 tk~aA~allArvyL~~~~~~~~~~~~~A~~~a~~vi~ 231 (527)
T 3ckc_A 195 DKAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIG 231 (527)
T ss_dssp CHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHh
Confidence 4455666666666653 677777777777764
No 351
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=24.38 E-value=2.2e+02 Score=28.72 Aligned_cols=29 Identities=10% Similarity=0.094 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 455 VSVLVQRALLYESMEKYKLGAEDLRTVLK 483 (503)
Q Consensus 455 ~kAlyrlA~Ay~~LGdyeeAle~LqkALk 483 (503)
..++|+.|..+...+++-+|+..|+.+++
T Consensus 252 A~A~y~~a~~~~e~~k~GeaIa~L~~A~~ 280 (363)
T 3rau_A 252 AVAHLHMGKQAEEQQKFGERVAYFQSALD 280 (363)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHhhhHHHHHHHHHHHHH
Confidence 34677778888888888888887766554
No 352
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=24.18 E-value=3.3e+02 Score=31.63 Aligned_cols=24 Identities=13% Similarity=-0.177 Sum_probs=17.8
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHH
Q 010705 384 AKNKGVDNQKAGQYADAIKWLSWA 407 (503)
Q Consensus 384 lk~lGn~~fkqGDY~eAIk~YeKA 407 (503)
...+-..+++.+.|.+|+.+.-++
T Consensus 148 v~~iv~~cl~hnae~~AvdLalE~ 171 (963)
T 4ady_A 148 FERMIEKCLKASELKLALGIALEG 171 (963)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHH
Confidence 344556678899999999887665
No 353
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=23.84 E-value=2.2e+02 Score=22.21 Aligned_cols=52 Identities=15% Similarity=0.033 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH-HHHHHHHHHHHcCCHHHHH
Q 010705 423 VLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVS-VLVQRALLYESMEKYKLGA 475 (503)
Q Consensus 423 aysNrAlcylrLGdyeeALedaekALkLdPd~~k-AlyrlA~Ay~~LGdyeeAl 475 (503)
.+..+++.---....++|...+ .+|+..+...+ +-.-+...++..|+|++|+
T Consensus 8 lLAe~AL~~TG~HcH~EA~tIA-~~L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 8 QLAELALAGTGHHCHQEAASIA-DWLAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHH-HHHHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHccchHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 3444444444455566665443 34555555433 4445577788888888875
No 354
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=23.57 E-value=71 Score=33.49 Aligned_cols=31 Identities=16% Similarity=0.329 Sum_probs=18.5
Q ss_pred hhHHHHHHHHHHHH------HcCCHHHHHHHHHHHHH
Q 010705 419 TMMEVLSTRASCYK------EVGEYKKAVADCSKVLE 449 (503)
Q Consensus 419 d~A~aysNrAlcyl------rLGdyeeALedaekALk 449 (503)
....++..++.+|+ ..+++++|++.++++|.
T Consensus 186 tk~aA~allarvyL~~~~y~~~~~~~~A~~~a~~vi~ 222 (499)
T 3jys_A 186 DQAVASALLARMYLNAEIYTGKARYTECINACNEVIK 222 (499)
T ss_dssp CHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhhccChhHHHHHHHHHHHHHh
Confidence 34445555566555 35667777777777663
No 355
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=23.49 E-value=70 Score=26.06 Aligned_cols=23 Identities=30% Similarity=0.388 Sum_probs=11.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHH
Q 010705 426 TRASCYKEVGEYKKAVADCSKVL 448 (503)
Q Consensus 426 NrAlcylrLGdyeeALedaekAL 448 (503)
.+|.=|..+|+|+.|+.+|+.++
T Consensus 17 k~ARe~Al~GnYdta~~yY~g~~ 39 (78)
T 2rpa_A 17 KLAREYALLGNYDSAMVYYQGVL 39 (78)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcChHHHHHHHHHHH
Confidence 34455555555555555554444
No 356
>3jq0_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE GOL SO4; 1.13A {Bacteroides vulgatus atcc 8482}
Probab=22.68 E-value=94 Score=32.36 Aligned_cols=28 Identities=18% Similarity=0.193 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHcC--------CHHHHHHHHHHHH
Q 010705 421 MEVLSTRASCYKEVG--------EYKKAVADCSKVL 448 (503)
Q Consensus 421 A~aysNrAlcylrLG--------dyeeALedaekAL 448 (503)
..++..+|.+|+..+ ++++|++.++++|
T Consensus 183 ~aA~allArvyL~~~~~~~~~~~~~~~A~~~a~~vi 218 (493)
T 3jq0_A 183 AATQMLKGEAYLWSGRQMNGGNSDYTIAKNAFENVK 218 (493)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHH
Confidence 344444555555433 4555555555554
No 357
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=22.51 E-value=1.5e+02 Score=30.08 Aligned_cols=27 Identities=11% Similarity=-0.015 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 457 VLVQRALLYESMEKYKLGAEDLRTVLK 483 (503)
Q Consensus 457 AlyrlA~Ay~~LGdyeeAle~LqkALk 483 (503)
++|+.|..+...+++-+|+..|+.+.+
T Consensus 259 A~y~~a~~~~e~~k~GeaIa~L~~A~~ 285 (392)
T 1zb1_A 259 SAYYHGLHLEEENRVGEAIAFLDFSMQ 285 (392)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 566778888888899999988887764
No 358
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=22.46 E-value=3.7e+02 Score=29.55 Aligned_cols=27 Identities=7% Similarity=0.062 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010705 457 VLVQRALLYESMEKYKLGAEDLRTVLK 483 (503)
Q Consensus 457 AlyrlA~Ay~~LGdyeeAle~LqkALk 483 (503)
++|+.|..+...++|.+|+.+|+.+++
T Consensus 262 A~y~~a~~~~e~~k~GeaIa~L~~A~~ 288 (704)
T 2xs1_A 262 AEYHQSILAKQQYYFGEEIARLQHAAE 288 (704)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHhHHHHHHHHHHHHHH
Confidence 567777777888899999999988765
No 359
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=22.39 E-value=2.8e+02 Score=24.15 Aligned_cols=83 Identities=16% Similarity=0.015 Sum_probs=50.6
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 010705 387 KGVDNQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYE 466 (503)
Q Consensus 387 lGn~~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLdPd~~kAlyrlA~Ay~ 466 (503)
++....-....++|..+-+..-.. + ....+-.-|...++..|+|++|+...+... ++..---++.|-.
T Consensus 12 ~AL~gTG~H~HqEA~tIAdwL~~~----~---~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~ 79 (115)
T 2uwj_G 12 LALAGSGQHCHEEALCIAEWLERL----G---QDEAARLIRISSLANQGRYQEALAFAHGNP-----WPALEPWFALCEW 79 (115)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHT----T---CHHHHHHHHHHHHHHTTCHHHHHGGGTTCC-----CGGGHHHHHHHHH
T ss_pred HHHHHccchHHHHHHHHHHHHHhC----C---cHHHHHHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHH
Confidence 333333445667776665543322 1 122333446677889999999887654322 5555555677888
Q ss_pred HcCCHHHHHHHHHHH
Q 010705 467 SMEKYKLGAEDLRTV 481 (503)
Q Consensus 467 ~LGdyeeAle~LqkA 481 (503)
++|--.++...+.+.
T Consensus 80 rlGl~s~le~rL~~l 94 (115)
T 2uwj_G 80 HLGLGAALDRRLAGL 94 (115)
T ss_dssp HTTCHHHHHHHHHHH
T ss_pred hcccHHHHHHHHHHH
Confidence 888888888777433
No 360
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=22.36 E-value=1.3e+02 Score=31.71 Aligned_cols=48 Identities=13% Similarity=0.159 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHcCCC-------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 010705 437 YKKAVADCSKVLEQDDT-------------NVSVLVQRALLYESMEKYKLGAEDLRTVLKI 484 (503)
Q Consensus 437 yeeALedaekALkLdPd-------------~~kAlyrlA~Ay~~LGdyeeAle~LqkALkL 484 (503)
++..+++++.|+.+-|. ..-|+-.+|.+|+..++|++|++++++++..
T Consensus 167 ~~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 167 LKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 35566777777765552 1237778899999999999999999999864
No 361
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=21.65 E-value=2.3e+02 Score=26.11 Aligned_cols=62 Identities=15% Similarity=0.096 Sum_probs=41.4
Q ss_pred HHHHHHH-HHHhCCHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Q 010705 384 AKNKGVD-NQKAGQYADAIKWLSWAVILLEKSGDMATMMEVLSTRASCYKEVGEYKKAVADCSKVLEQD 451 (503)
Q Consensus 384 lk~lGn~-~fkqGDY~eAIk~YeKALeL~pk~~ddpd~A~aysNrAlcylrLGdyeeALedaekALkLd 451 (503)
+.+++.. +..+++-++--+.+...+. +.+-.++++..+|.+|.++|+..+|-+.+.+|.+..
T Consensus 93 ~vd~ALd~lv~~~KkDqLdki~~~~l~------n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 93 HVNKALDILVIQGKRDKLEEIGREILK------NNEVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHC--------CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccHhHHHHHHHHHhc------cCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 4444433 3455555554454544321 234457899999999999999999999999988753
No 362
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=20.47 E-value=4.7e+02 Score=26.46 Aligned_cols=87 Identities=10% Similarity=0.100 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHH----HHHhcCC---ChhhHHHHHHHHH---HH------HHcCC-------HH
Q 010705 382 AAAKNKGVDNQKAGQYADAIKWLSWAVI----LLEKSGD---MATMMEVLSTRAS---CY------KEVGE-------YK 438 (503)
Q Consensus 382 ~alk~lGn~~fkqGDY~eAIk~YeKALe----L~pk~~d---dpd~A~aysNrAl---cy------lrLGd-------ye 438 (503)
--++.+..+....|+.++.+..+.=.|. ++..... -+....+.+.+|+ .- ++.++ ++
T Consensus 23 ~gly~msre~le~g~i~~sv~LLNGIIHECDRLLR~~e~~~~Lpd~FhAIYAlALl~lSELa~~a~Fk~ede~~V~eFFD 102 (346)
T 3qtm_A 23 WGLYEMSREKLENDDIDASVSLVFGTIHEADRILRNTEDISTLPKDFHAAYSSALLAVSELFEIAQKRLKETNTEESYID 102 (346)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHHHHHHTHHHHGGGSCTTCCHHHHHH
T ss_pred HhHHHHHHHHhhccCchhhhHHHcChHHHHHHHHHccCCCCCCCHHHHHHHHHHHHhHHHhhHHhhccCchhhhHHHHHH
Confidence 3467788888999999988887655442 2222221 1222222222333 11 12221 57
Q ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHc
Q 010705 439 KAVADCSKVLEQDDTNVSVLVQRALLYESM 468 (503)
Q Consensus 439 eALedaekALkLdPd~~kAlyrlA~Ay~~L 468 (503)
.|++-++-.++..|++....+.++.+++..
T Consensus 103 aALERielGLe~~p~s~~L~la~SKILlqr 132 (346)
T 3qtm_A 103 AAIERAQLGLDAPGNESRLFLALARAYLEK 132 (346)
T ss_dssp HHHHHHHHGGGSSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhCCCChhHHHHHHHHHHHH
Confidence 788888888888999998888877777653
No 363
>3nqp_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Bacteroides fragilis nctc 9343}
Probab=20.32 E-value=1.4e+02 Score=31.11 Aligned_cols=14 Identities=21% Similarity=0.228 Sum_probs=7.7
Q ss_pred CHHHHHHHHHHHHH
Q 010705 436 EYKKAVADCSKVLE 449 (503)
Q Consensus 436 dyeeALedaekALk 449 (503)
+|++|++.++++|.
T Consensus 228 ~~~~A~~~a~~vi~ 241 (514)
T 3nqp_A 228 DLTIAKTHLESVLN 241 (514)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 35555555555554
Done!