Your job contains 1 sequence.
>010709
MMYEPPHRRTSSSNSVSKVSSSSSSSSSSSSSSSVVTLDSDLTTKLSFSSKSLPNFSNSN
SNTTCRRSYASHPVPQPVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPI
ESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMI
QHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRS
ELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDK
HQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRLLALL
VEEAFLAEKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDF
RNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVLLAASESLCTTSFNITTNLDGDMKKL
EFCLILAITVLLFVIFLSIISWI
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010709
(503 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0029979 - symbol:CG10777 species:7227 "Drosophila ... 766 5.0e-76 1
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ... 755 7.3e-75 1
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 731 2.5e-72 1
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 723 1.8e-71 1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph... 721 2.9e-71 1
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 718 6.1e-71 1
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"... 718 6.1e-71 1
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"... 718 6.1e-71 1
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"... 718 6.1e-71 1
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R... 718 6.1e-71 1
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R... 718 6.1e-71 1
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"... 718 6.1e-71 1
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo... 718 6.1e-71 1
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 713 2.1e-70 1
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 712 2.6e-70 1
ZFIN|ZDB-GENE-030131-667 - symbol:ddx46 "DEAD (Asp-Glu-Al... 713 4.2e-70 1
UNIPROTKB|F1NM08 - symbol:DDX5 "Uncharacterized protein" ... 709 5.5e-70 1
UNIPROTKB|F1NXI3 - symbol:DDX5 "Uncharacterized protein" ... 709 5.5e-70 1
UNIPROTKB|C9JMU5 - symbol:DDX17 "Probable ATP-dependent R... 707 8.9e-70 1
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 706 1.1e-69 1
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi... 702 3.0e-69 1
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala... 702 3.0e-69 1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 700 4.9e-69 1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 695 1.7e-68 1
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas... 694 2.1e-68 1
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ... 690 5.6e-68 1
UNIPROTKB|F1PEA6 - symbol:DDX5 "Uncharacterized protein" ... 690 5.6e-68 1
UNIPROTKB|J3KTA4 - symbol:DDX5 "Probable ATP-dependent RN... 690 5.6e-68 1
UNIPROTKB|P17844 - symbol:DDX5 "Probable ATP-dependent RN... 690 5.6e-68 1
UNIPROTKB|Q5R4I9 - symbol:DDX5 "Probable ATP-dependent RN... 690 5.6e-68 1
MGI|MGI:105037 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box ... 689 7.2e-68 1
RGD|619906 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box heli... 689 7.2e-68 1
TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi... 688 9.2e-68 1
UNIPROTKB|Q4R6M5 - symbol:DDX5 "Probable ATP-dependent RN... 686 1.5e-67 1
WB|WBGene00018776 - symbol:F53H1.1 species:6239 "Caenorha... 686 1.8e-67 1
ZFIN|ZDB-GENE-050706-53 - symbol:ddx42 "DEAD (Asp-Glu-Ala... 685 1.9e-67 1
UNIPROTKB|E1BJD2 - symbol:DDX42 "Uncharacterized protein"... 684 2.4e-67 1
TAIR|locus:2037416 - symbol:RCF1 "regulator of CBF gene e... 691 3.0e-67 1
UNIPROTKB|A5A6J2 - symbol:DDX5 "Probable ATP-dependent RN... 683 3.1e-67 1
RGD|1311758 - symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box po... 678 1.1e-66 1
UNIPROTKB|E2RFF1 - symbol:DDX42 "Uncharacterized protein"... 677 1.3e-66 1
UNIPROTKB|Q86XP3 - symbol:DDX42 "ATP-dependent RNA helica... 677 1.3e-66 1
MGI|MGI:1919297 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) bo... 677 1.3e-66 1
WB|WBGene00019245 - symbol:sacy-1 species:6239 "Caenorhab... 677 1.3e-66 1
RGD|1304909 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box po... 676 1.7e-66 1
UNIPROTKB|Q5R7D1 - symbol:DDX42 "ATP-dependent RNA helica... 675 2.2e-66 1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 675 2.2e-66 1
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi... 675 2.2e-66 1
UNIPROTKB|F1MX40 - symbol:DDX46 "Uncharacterized protein"... 679 2.7e-66 1
MGI|MGI:1920185 - symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) bo... 674 2.8e-66 1
RGD|1559513 - symbol:RGD1559513 "similar to DEAD (Asp-Glu... 674 2.8e-66 1
UNIPROTKB|A3KN07 - symbol:DDX41 "Uncharacterized protein"... 673 3.6e-66 1
UNIPROTKB|E2R052 - symbol:DDX41 "Uncharacterized protein"... 673 3.6e-66 1
UNIPROTKB|J9NZF6 - symbol:DDX41 "Uncharacterized protein"... 673 3.6e-66 1
UNIPROTKB|J3KNN5 - symbol:DDX41 "Probable ATP-dependent R... 673 3.6e-66 1
UNIPROTKB|Q9UJV9 - symbol:DDX41 "Probable ATP-dependent R... 673 3.6e-66 1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi... 673 3.6e-66 1
UNIPROTKB|Q7L014 - symbol:DDX46 "Probable ATP-dependent R... 677 4.5e-66 1
UNIPROTKB|F1PK90 - symbol:DDX46 "Uncharacterized protein"... 677 4.6e-66 1
UNIPROTKB|I3LR20 - symbol:DDX46 "Uncharacterized protein"... 677 4.6e-66 1
MGI|MGI:1920895 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) bo... 677 4.6e-66 1
RGD|708480 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box pol... 677 4.6e-66 1
UNIPROTKB|Q62780 - symbol:Ddx46 "Probable ATP-dependent R... 677 4.6e-66 1
UNIPROTKB|A4RN46 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 672 1.4e-65 1
UNIPROTKB|E1BSC0 - symbol:DDX46 "Uncharacterized protein"... 672 1.6e-65 1
UNIPROTKB|F1P0H1 - symbol:DDX42 "ATP-dependent RNA helica... 664 3.2e-65 1
UNIPROTKB|F1NJ40 - symbol:DDX42 "ATP-dependent RNA helica... 664 4.3e-65 1
UNIPROTKB|E2RRQ7 - symbol:DDX3X "Uncharacterized protein"... 662 5.2e-65 1
UNIPROTKB|Q5F485 - symbol:DDX42 "ATP-dependent RNA helica... 663 5.5e-65 1
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi... 661 6.7e-65 1
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po... 661 6.7e-65 1
UNIPROTKB|F1NAH6 - symbol:LOC100859810 "Uncharacterized p... 659 1.1e-64 1
UNIPROTKB|F1NIX1 - symbol:DDX3X "Uncharacterized protein"... 659 1.1e-64 1
TAIR|locus:2176192 - symbol:AT5G51280 species:3702 "Arabi... 659 1.1e-64 1
FB|FBgn0037549 - symbol:CG7878 species:7227 "Drosophila m... 658 1.4e-64 1
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"... 657 1.8e-64 1
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795... 657 1.8e-64 1
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 656 2.3e-64 1
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 656 2.3e-64 1
UNIPROTKB|B4DXX7 - symbol:DDX3Y "Uncharacterized protein"... 655 2.9e-64 1
UNIPROTKB|O15523 - symbol:DDX3Y "ATP-dependent RNA helica... 655 2.9e-64 1
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"... 654 3.7e-64 1
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"... 654 3.7e-64 1
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica... 654 3.7e-64 1
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"... 654 3.7e-64 1
UNIPROTKB|D3IVZ2 - symbol:DDX3Y "Uncharacterized protein"... 653 4.7e-64 1
UNIPROTKB|I3LDV0 - symbol:DDX3Y "Uncharacterized protein"... 653 4.7e-64 1
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu... 653 4.7e-64 1
WB|WBGene00010260 - symbol:F58E10.3 species:6239 "Caenorh... 653 4.7e-64 1
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ... 652 6.0e-64 1
TAIR|locus:2119176 - symbol:AT4G33370 species:3702 "Arabi... 652 6.0e-64 1
ASPGD|ASPL0000055571 - symbol:AN1266 species:162425 "Emer... 660 7.1e-64 1
FB|FBgn0263231 - symbol:bel "belle" species:7227 "Drosoph... 649 1.2e-63 1
MGI|MGI:91842 - symbol:D1Pas1 "DNA segment, Chr 1, Pasteu... 649 1.2e-63 1
RGD|1309586 - symbol:RGD1309586 "similar to probable ATP-... 649 1.2e-63 1
ZFIN|ZDB-GENE-030131-1565 - symbol:ddx3 "DEAD (Asp-Glu-Al... 648 1.6e-63 1
UNIPROTKB|F1RSJ7 - symbol:DDX42 "Uncharacterized protein"... 650 1.7e-63 1
WB|WBGene00006888 - symbol:vbh-1 species:6239 "Caenorhabd... 647 2.0e-63 1
FB|FBgn0015331 - symbol:abs "abstrakt" species:7227 "Dros... 646 2.6e-63 1
ZFIN|ZDB-GENE-080204-77 - symbol:ddx43 "DEAD (Asp-Glu-Ala... 621 5.4e-63 2
WARNING: Descriptions of 830 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 159/377 (42%), Positives = 247/377 (65%)
Query: 79 FNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEF 138
F N P+ L + +Q+ E+R L ++TV+ +P P + SF + L ++++++
Sbjct: 201 FYNIHPN--TLAKSEQQVAEIRREL--EITVSGNELPHP--VVSFEESSLPAHVIEEMKR 254
Query: 139 HEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLAL 198
+T+PT+IQ+Q P+ALSGRDL+G A+TGSGKT A+ +P I H Q P+ RG+GP+AL
Sbjct: 255 QGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPIIRGEGPIAL 314
Query: 199 VLAPTRELAQQIEKEVKALSRSLD-SFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFL 257
VLAPTRELAQQI+ V+ + + GG++ Q +L GV +++ATPGR +
Sbjct: 315 VLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVPQARDLDRGVEVIIATPGRLI 374
Query: 258 DHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEA 316
D L+ NT+L R ++++LDEADRMLDMGFEPQIR++++ + PD+ Q +++SAT P E++A
Sbjct: 375 DFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR-QVVMWSATWPKEVQA 433
Query: 317 LAQEYLTDPVQVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFP 375
LA ++L D +Q+ +G ++ S N+ QI+E +E EK R +
Sbjct: 434 LAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRLVCLLNEISPIKNSGNNGNK 493
Query: 376 LTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVAS 435
+ IVFVE K + +++ + + AEG +A ++HG + Q++R+S L+DFRNG +NIL+ATDVAS
Sbjct: 494 I-IVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFRNGKSNILIATDVAS 552
Query: 436 RGLDVMGVAHVVNLDLP 452
RGLDV + +V+N D P
Sbjct: 553 RGLDVEDLQYVINYDYP 569
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 167/375 (44%), Positives = 234/375 (62%)
Query: 80 NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFH 139
N +KP D VL + E L N ++T+ VP P+ IE F + +M +I
Sbjct: 120 NFYKPCDSVLARTVGETETF-LTSN-EITIKGDQVPTPS-IE-FEEGGFPDYVMNEIRKQ 175
Query: 140 EYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALV 199
+ +PT+IQAQ P+A+SGRDL+G A+TGSGKT A+ +P + H Q + RGDGP+ALV
Sbjct: 176 GFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALV 235
Query: 200 LAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDH 259
LAPTRELAQQI+ +V S + + GG +Q +L GV IV+ATPGR +D
Sbjct: 236 LAPTRELAQQIQ-QVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDF 294
Query: 260 LQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALA 318
L++G TSL R ++++LDEADRMLDMGFEPQIR++MQ + PD+ Q L++SAT P E+ LA
Sbjct: 295 LERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDR-QVLMWSATWPKEVRQLA 353
Query: 319 QEYLTDPVQVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLT 377
+E+L + +QV +G +S S N++QI++ ENEK+ + T
Sbjct: 354 EEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETK------T 407
Query: 378 IVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRG 437
I+FVE K R DE++ + +G A A+HG ++Q +R+ L FRNG +ILVATDVA+RG
Sbjct: 408 IIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARG 467
Query: 438 LDVMGVAHVVNLDLP 452
LDV V V+N D P
Sbjct: 468 LDVDDVKFVINYDYP 482
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
Identities = 152/358 (42%), Positives = 228/358 (63%)
Query: 97 EEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVAL 156
E + R ++T++ +P P I +F + ++ +++ + +PT IQ Q P+AL
Sbjct: 91 EIAQFRKENEMTISGHDIPKP--ITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMAL 148
Query: 157 SGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKA 216
SGRD++G A TGSGKT ++ +P I H AQ + GDGP+ LVLAPTRELA QI+ E
Sbjct: 149 SGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQTECSK 208
Query: 217 LSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILD 276
S + V GG ++Q +L G IV+ATPGR +D L+ G T+L RV++++LD
Sbjct: 209 FGHS-SRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLD 267
Query: 277 EADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVS- 334
EADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E++ LA +YL DP+QV+VG +
Sbjct: 268 EADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVKQLAADYLNDPIQVQVGSLEL 326
Query: 335 SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEAL 394
S + N+ QI+E VS+ EK DR T++F K CD++++ L
Sbjct: 327 SASHNITQIVEVVSDFEKRDRLNKYLETASQDNEYK------TLIFASTKRMCDDITKYL 380
Query: 395 VAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+G A+A+HG ++Q +R+ L++FRNG + I+VATDVA+RG+DV G+ +V+N D+P
Sbjct: 381 REDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMP 438
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 159/390 (40%), Positives = 235/390 (60%)
Query: 66 RRSYASHPVPQPVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTD 125
++ + + +P+ N + V R P ++EE LR ++T+ G P P+ +F
Sbjct: 38 KKKWDLNELPKFEKNFYVEHPEVARLTPYEVEE--LRRKKEITIR-GMEGCPKPVFAF-H 93
Query: 126 MCLHPSIMKDIEFHE-YTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCV 184
C P + D + +T PT IQ Q P+ALSGRD++G A+TGSGKT A+ +P I H
Sbjct: 94 QCSFPQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHIN 153
Query: 185 AQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRG 244
Q + RGDGP+ LVLAPTRELAQQ+++ + K+ + GG Q +L
Sbjct: 154 HQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKC-SRLKSTCIYGGAPKGPQIRDLER 212
Query: 245 GVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQT 303
GV I +ATPGR +D L+ G T+L R ++++LDEADRMLDMGFEPQIR+++ + PD+ QT
Sbjct: 213 GVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR-QT 271
Query: 304 LLFSATMPVEIEALAQEYLTDPVQVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXX 362
L++SAT P E+ LA+++L D VQ+ VG + S N++QI++ E+EK D
Sbjct: 272 LMWSATWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIVDVCMESEK-DHKLIQLME 330
Query: 363 XXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRN 422
++ TI+FVE K RCD+++ + +G A+ +HG ++Q +R+ L +FR+
Sbjct: 331 EIMAEKEN-----KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 385
Query: 423 GSTNILVATDVASRGLDVMGVAHVVNLDLP 452
G IL+ATDVASRGLDV V V+N D P
Sbjct: 386 GKAPILIATDVASRGLDVEDVKFVINYDYP 415
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 156/376 (41%), Positives = 235/376 (62%)
Query: 80 NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFH 139
N ++ V +P +++ R R ++TV G VP P I+ F+++ L +MK+I
Sbjct: 245 NFYQEHPNVANRSPYEVQ--RYREEQEITVR-GQVPNP--IQDFSEVHLPDYVMKEIRRQ 299
Query: 140 EYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALV 199
Y PT+IQAQ P+A+SG + +G A+TGSGKT + +P I H Q P+ RGDGP+ALV
Sbjct: 300 GYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALV 359
Query: 200 LAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDH 259
LAPTRELAQQI++ S + V GG Q +L+ G IV+ATPGR +D
Sbjct: 360 LAPTRELAQQIQQVATEFGSS-SYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDF 418
Query: 260 LQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALA 318
L G+T+L R ++++LDEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E++ LA
Sbjct: 419 LSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDR-QTLMWSATWPKEVKQLA 477
Query: 319 QEYLTDPVQVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLT 377
+++L + +Q+ +G + S N+ Q+++ E K ++ P +
Sbjct: 478 EDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSES---PGKI- 533
Query: 378 IVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRG 437
I+FVE K R D + + + G+ A+HG ++QS+R+ LR+FR+G +NILVATDVA+RG
Sbjct: 534 IIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARG 593
Query: 438 LDVMGVAHVVNLDLPK 453
LDV G+ +V+N D P+
Sbjct: 594 LDVDGIKYVINFDYPQ 609
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 151/359 (42%), Positives = 224/359 (62%)
Query: 96 IEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVA 155
IE+ R + N ++TV +P P I +F + ++++++ + +PT IQ Q P+A
Sbjct: 106 IEQFR-KEN-EMTVKGHDIPHP--ITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMA 161
Query: 156 LSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVK 215
LSGRD++G A TGSGKT ++ +P I H AQ + GDGP+ LVLAPTRELA QI+ E
Sbjct: 162 LSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGDGPIVLVLAPTRELAVQIQTECS 221
Query: 216 ALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVIL 275
+S + V GG Q +L GV I +ATPGR +D L+ G T+L RV++++L
Sbjct: 222 KFGKS-SRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYLVL 280
Query: 276 DEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVS 334
DEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E++ L ++YL DP+QV +G +
Sbjct: 281 DEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLE 339
Query: 335 SPTANVI-QILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEA 393
++ I Q++E + E K DR +VF K CDE++
Sbjct: 340 LAASHTITQLVEVIDEFSKRDRLVKHLESALNEKDNKI------LVFASTKRTCDEITTY 393
Query: 394 LVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
L ++G A+A+HG + Q++R+ L +FR G T+I+VATDVA+RG+DV G+ HV+N D+P
Sbjct: 394 LRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDVKGITHVINYDMP 452
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 155/367 (42%), Positives = 224/367 (61%)
Query: 88 VLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSI 147
V R P +++E LR ++TV G V P P+ +F +M + +T PT I
Sbjct: 62 VARLTPYEVDE--LRRKKEITVRGGDV-CPKPVFAFHHANFPQYVMDVLMDQHFTEPTPI 118
Query: 148 QAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELA 207
Q Q P+ALSGRD++G A+TGSGKT A+ +P I H Q + RGDGP+ LVLAPTRELA
Sbjct: 119 QCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELA 178
Query: 208 QQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSL 267
QQ+++ + K+ + GG Q +L GV I +ATPGR +D L+ G T+L
Sbjct: 179 QQVQQVADDYGKC-SRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNL 237
Query: 268 SRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPV 326
R ++++LDEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D
Sbjct: 238 RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLRDYT 296
Query: 327 QVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKT 385
Q+ VG + S N++QI++ E+EK D ++ TI+FVE K
Sbjct: 297 QINVGNLELSANHNILQIVDVCMESEK-DHKLIQLMEEIMAEKEN-----KTIIFVETKR 350
Query: 386 RCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAH 445
RCD+++ + +G A+ +HG ++Q +R+ L +FR+G IL+ATDVASRGLDV V
Sbjct: 351 RCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKF 410
Query: 446 VVNLDLP 452
V+N D P
Sbjct: 411 VINYDYP 417
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 155/367 (42%), Positives = 224/367 (61%)
Query: 88 VLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSI 147
V R P +++E LR ++TV G V P P+ +F +M + +T PT I
Sbjct: 62 VARLTPYEVDE--LRRKKEITVRGGDV-CPKPVFAFHHANFPQYVMDVLMDQHFTEPTPI 118
Query: 148 QAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELA 207
Q Q P+ALSGRD++G A+TGSGKT A+ +P I H Q + RGDGP+ LVLAPTRELA
Sbjct: 119 QCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELA 178
Query: 208 QQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSL 267
QQ+++ + K+ + GG Q +L GV I +ATPGR +D L+ G T+L
Sbjct: 179 QQVQQVADDYGKC-SRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNL 237
Query: 268 SRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPV 326
R ++++LDEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D
Sbjct: 238 RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLRDYT 296
Query: 327 QVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKT 385
Q+ VG + S N++QI++ E+EK D ++ TI+FVE K
Sbjct: 297 QINVGNLELSANHNILQIVDVCMESEK-DHKLIQLMEEIMAEKEN-----KTIIFVETKR 350
Query: 386 RCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAH 445
RCD+++ + +G A+ +HG ++Q +R+ L +FR+G IL+ATDVASRGLDV V
Sbjct: 351 RCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKF 410
Query: 446 VVNLDLP 452
V+N D P
Sbjct: 411 VINYDYP 417
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 155/367 (42%), Positives = 224/367 (61%)
Query: 88 VLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSI 147
V R P +++E LR ++TV G V P P+ +F +M + +T PT I
Sbjct: 143 VARLTPYEVDE--LRRKKEITVRGGDV-CPKPVFAFHHANFPQYVMDVLMDQHFTEPTPI 199
Query: 148 QAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELA 207
Q Q P+ALSGRD++G A+TGSGKT A+ +P I H Q + RGDGP+ LVLAPTRELA
Sbjct: 200 QCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELA 259
Query: 208 QQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSL 267
QQ+++ + K+ + GG Q +L GV I +ATPGR +D L+ G T+L
Sbjct: 260 QQVQQVADDYGKC-SRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNL 318
Query: 268 SRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPV 326
R ++++LDEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D
Sbjct: 319 RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLRDYT 377
Query: 327 QVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKT 385
Q+ VG + S N++QI++ E+EK D ++ TI+FVE K
Sbjct: 378 QINVGNLELSANHNILQIVDVCMESEK-DHKLIQLMEEIMAEKEN-----KTIIFVETKR 431
Query: 386 RCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAH 445
RCD+++ + +G A+ +HG ++Q +R+ L +FR+G IL+ATDVASRGLDV V
Sbjct: 432 RCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKF 491
Query: 446 VVNLDLP 452
V+N D P
Sbjct: 492 VINYDYP 498
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 155/367 (42%), Positives = 224/367 (61%)
Query: 88 VLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSI 147
V R P +++E LR ++TV G V P P+ +F +M + +T PT I
Sbjct: 141 VARLTPYEVDE--LRRKKEITVRGGDV-CPKPVFAFHHANFPQYVMDVLMDQHFTEPTPI 197
Query: 148 QAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELA 207
Q Q P+ALSGRD++G A+TGSGKT A+ +P I H Q + RGDGP+ LVLAPTRELA
Sbjct: 198 QCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELA 257
Query: 208 QQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSL 267
QQ+++ + K+ + GG Q +L GV I +ATPGR +D L+ G T+L
Sbjct: 258 QQVQQVADDYGKC-SRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNL 316
Query: 268 SRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPV 326
R ++++LDEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D
Sbjct: 317 RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLRDYT 375
Query: 327 QVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKT 385
Q+ VG + S N++QI++ E+EK D ++ TI+FVE K
Sbjct: 376 QINVGNLELSANHNILQIVDVCMESEK-DHKLIQLMEEIMAEKEN-----KTIIFVETKR 429
Query: 386 RCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAH 445
RCD+++ + +G A+ +HG ++Q +R+ L +FR+G IL+ATDVASRGLDV V
Sbjct: 430 RCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKF 489
Query: 446 VVNLDLP 452
V+N D P
Sbjct: 490 VINYDYP 496
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 155/367 (42%), Positives = 224/367 (61%)
Query: 88 VLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSI 147
V R P +++E LR ++TV G V P P+ +F +M + +T PT I
Sbjct: 141 VARLTPYEVDE--LRRKKEITVRGGDV-CPKPVFAFHHANFPQYVMDVLMDQHFTEPTPI 197
Query: 148 QAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELA 207
Q Q P+ALSGRD++G A+TGSGKT A+ +P I H Q + RGDGP+ LVLAPTRELA
Sbjct: 198 QCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELA 257
Query: 208 QQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSL 267
QQ+++ + K+ + GG Q +L GV I +ATPGR +D L+ G T+L
Sbjct: 258 QQVQQVADDYGKC-SRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNL 316
Query: 268 SRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPV 326
R ++++LDEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D
Sbjct: 317 RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLRDYT 375
Query: 327 QVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKT 385
Q+ VG + S N++QI++ E+EK D ++ TI+FVE K
Sbjct: 376 QINVGNLELSANHNILQIVDVCMESEK-DHKLIQLMEEIMAEKEN-----KTIIFVETKR 429
Query: 386 RCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAH 445
RCD+++ + +G A+ +HG ++Q +R+ L +FR+G IL+ATDVASRGLDV V
Sbjct: 430 RCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKF 489
Query: 446 VVNLDLP 452
V+N D P
Sbjct: 490 VINYDYP 496
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 155/367 (42%), Positives = 224/367 (61%)
Query: 88 VLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSI 147
V R P +++E LR ++TV G V P P+ +F +M + +T PT I
Sbjct: 143 VARLTPYEVDE--LRRKKEITVRGGDV-CPKPVFAFHHANFPQYVMDVLMDQHFTEPTPI 199
Query: 148 QAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELA 207
Q Q P+ALSGRD++G A+TGSGKT A+ +P I H Q + RGDGP+ LVLAPTRELA
Sbjct: 200 QCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELA 259
Query: 208 QQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSL 267
QQ+++ + K+ + GG Q +L GV I +ATPGR +D L+ G T+L
Sbjct: 260 QQVQQVADDYGKC-SRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNL 318
Query: 268 SRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPV 326
R ++++LDEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D
Sbjct: 319 RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLRDYT 377
Query: 327 QVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKT 385
Q+ VG + S N++QI++ E+EK D ++ TI+FVE K
Sbjct: 378 QINVGNLELSANHNILQIVDVCMESEK-DHKLIQLMEEIMAEKEN-----KTIIFVETKR 431
Query: 386 RCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAH 445
RCD+++ + +G A+ +HG ++Q +R+ L +FR+G IL+ATDVASRGLDV V
Sbjct: 432 RCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKF 491
Query: 446 VVNLDLP 452
V+N D P
Sbjct: 492 VINYDYP 498
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 155/367 (42%), Positives = 224/367 (61%)
Query: 88 VLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSI 147
V R P +++E LR ++TV G V P P+ +F +M + +T PT I
Sbjct: 62 VARLTPYEVDE--LRRKKEITVRGGDV-CPKPVFAFHHANFPQYVMDVLMDQHFTEPTPI 118
Query: 148 QAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELA 207
Q Q P+ALSGRD++G A+TGSGKT A+ +P I H Q + RGDGP+ LVLAPTRELA
Sbjct: 119 QCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELA 178
Query: 208 QQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSL 267
QQ+++ + K+ + GG Q +L GV I +ATPGR +D L+ G T+L
Sbjct: 179 QQVQQVADDYGKC-SRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNL 237
Query: 268 SRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPV 326
R ++++LDEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D
Sbjct: 238 RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLRDYT 296
Query: 327 QVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKT 385
Q+ VG + S N++QI++ E+EK D ++ TI+FVE K
Sbjct: 297 QINVGNLELSANHNILQIVDVCMESEK-DHKLIQLMEEIMAEKEN-----KTIIFVETKR 350
Query: 386 RCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAH 445
RCD+++ + +G A+ +HG ++Q +R+ L +FR+G IL+ATDVASRGLDV V
Sbjct: 351 RCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKF 410
Query: 446 VVNLDLP 452
V+N D P
Sbjct: 411 VINYDYP 417
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 157/376 (41%), Positives = 227/376 (60%)
Query: 80 NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFH 139
N + + V + +EE R + + V SG P P+ +F P + D+
Sbjct: 58 NFYNENPEVHHMSQYDVEEYRRKREITVR-GSG---CPKPVTNF-HQAQFPQYVMDVLLQ 112
Query: 140 E-YTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLAL 198
+ + PT+IQAQ P+ALSGRD++G A+TGSGKT A+ +P I H Q + RGDGP+ L
Sbjct: 113 QNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICL 172
Query: 199 VLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLD 258
VLAPTRELAQQ+++ +S K+ V GG Q +L GV I +ATPGR +D
Sbjct: 173 VLAPTRELAQQVQQVAFDYGKS-SRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLID 231
Query: 259 HLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEAL 317
L+ G T+L R ++++LDEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ L
Sbjct: 232 FLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQL 290
Query: 318 AQEYLTDPVQVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPL 376
A+++L D VQ+ +G + S N++QI++ ENEK ++
Sbjct: 291 AEDFLQDYVQINIGALELSANHNILQIVDVCMENEKDNKLIQLMEEIMAEKENK------ 344
Query: 377 TIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASR 436
TI+FVE K RCDE++ + +G A+ +HG ++Q +R+ L +FR+G IL+ATDVASR
Sbjct: 345 TIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASR 404
Query: 437 GLDVMGVAHVVNLDLP 452
GLDV V V+N D P
Sbjct: 405 GLDVEDVKFVINYDYP 420
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 159/370 (42%), Positives = 222/370 (60%)
Query: 88 VLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSI 147
V +F E+IE + R + +TV VP P PI FT +MK+I + PT I
Sbjct: 355 VSKFTQEEIE--KFRASFQMTVKGREVP-P-PIMQFTQAPFPGYLMKEIIGAGFPNPTPI 410
Query: 148 QAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELA 207
Q+QA P+AL GRD++G A+TGSGKT AF +P I H AQ + DGP+ LVLAPTRELA
Sbjct: 411 QSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLREDDGPIVLVLAPTRELA 470
Query: 208 QQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSL 267
QI++E + T V GG + Q + L+ GV IV+ATPGR +D L+ G T+L
Sbjct: 471 LQIQEETNKFGGTSQISNTC-VYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTNL 529
Query: 268 SRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPV 326
RV++++LDEADRMLDMGFEPQIR+++ + PD+ QTL+FSAT P E++ALA ++LTD +
Sbjct: 530 RRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDR-QTLMFSATWPKEVQALAHDFLTDHI 588
Query: 327 QVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKT 385
QV +G + NV QI+E + EK +R IVF E +
Sbjct: 589 QVHIGSTEITANHNVRQIVEVCQDFEKKERMLSFLGSVGRDEK--------VIVFAETRK 640
Query: 386 RCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAH 445
D++ L G ++ +HG ++Q +R+ L F+NG I++ATDVASRGLD+ + +
Sbjct: 641 GVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATDVASRGLDIKDIKY 700
Query: 446 VVNLDLPKVL 455
VVN D P +
Sbjct: 701 VVNYDFPNTI 710
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 713 (256.0 bits), Expect = 4.2e-70, P = 4.2e-70
Identities = 155/367 (42%), Positives = 228/367 (62%)
Query: 90 RFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQA 149
R +PE++ E RL L ++V P PI+++ + ++ ++ H Y +PT IQA
Sbjct: 329 RMSPEEVSEYRLELE-GISVKGKG--CPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQA 385
Query: 150 QAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQ 209
QA+P +SGRDL+G A+TGSGKT AF +PM +H + Q PVG +GPLA+++ PTRELA Q
Sbjct: 386 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQRPVGEAEGPLAVIMTPTRELALQ 445
Query: 210 IEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGN---TS 266
I KE K S+SL + + V GGT I+EQ +EL+ G I+V TPGR +D L N T+
Sbjct: 446 ITKECKKFSKSL-ALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTN 504
Query: 267 LSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDP 325
L RV++V++DEADRM DMGFEPQ+ ++ N+ PD+ QT++FSAT P +EALA+ L+ P
Sbjct: 505 LRRVTYVVIDEADRMFDMGFEPQVMRIVDNVRPDR-QTVMFSATFPRTMEALARRILSKP 563
Query: 326 VQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKT 385
V+V+VG S ++V Q + + E +K + I+FV+++
Sbjct: 564 VEVQVGGRSVVCSDVEQHVIVIEEEKKFLKLLEILGHYQEKGS--------VIIFVDKQE 615
Query: 386 RCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAH 445
D + + L+ ++LHGG +Q DR+S + DF+NG+ +LVAT VA+RGLDV +
Sbjct: 616 HADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARGLDVKQLIL 675
Query: 446 VVNLDLP 452
VVN P
Sbjct: 676 VVNYSCP 682
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 154/375 (41%), Positives = 232/375 (61%)
Query: 80 NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFH 139
N ++ V+R +++E+ R + +VTV + P PI +F + ++M+ I+
Sbjct: 45 NFYQEHPDVVRRTAQEVEQYRS--SKEVTVRGHN--CPKPIINFYEANFPANVMEVIQRQ 100
Query: 140 EYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALV 199
+T PT+IQAQ PVALSG D++G A+TGSGKT ++ +P I H Q + RGDGP+ LV
Sbjct: 101 NFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLV 160
Query: 200 LAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDH 259
LAPTRELAQQ+++ SR+ K+ + GG Q +L GV I +ATPGR +D
Sbjct: 161 LAPTRELAQQVQQVAAEYSRAC-RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDF 219
Query: 260 LQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALA 318
L+ G T+L R ++++LDEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA
Sbjct: 220 LEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLA 278
Query: 319 QEYLTDPVQVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLT 377
+++L + V + +G + S N++QI++ + EK D+ T
Sbjct: 279 EDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENK------T 332
Query: 378 IVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRG 437
IVFVE K RCD+++ + +G A+ +HG ++Q +R+ L +F++G IL+ATDVASRG
Sbjct: 333 IVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRG 392
Query: 438 LDVMGVAHVVNLDLP 452
LDV V V+N D P
Sbjct: 393 LDVEDVKFVINYDYP 407
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 154/375 (41%), Positives = 232/375 (61%)
Query: 80 NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFH 139
N ++ V+R +++E+ R + +VTV + P PI +F + ++M+ I+
Sbjct: 53 NFYQEHPDVVRRTAQEVEQYRS--SKEVTVRGHN--CPKPIINFYEANFPANVMEVIQRQ 108
Query: 140 EYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALV 199
+T PT+IQAQ PVALSG D++G A+TGSGKT ++ +P I H Q + RGDGP+ LV
Sbjct: 109 NFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLV 168
Query: 200 LAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDH 259
LAPTRELAQQ+++ SR+ K+ + GG Q +L GV I +ATPGR +D
Sbjct: 169 LAPTRELAQQVQQVAAEYSRAC-RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDF 227
Query: 260 LQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALA 318
L+ G T+L R ++++LDEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA
Sbjct: 228 LEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLA 286
Query: 319 QEYLTDPVQVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLT 377
+++L + V + +G + S N++QI++ + EK D+ T
Sbjct: 287 EDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENK------T 340
Query: 378 IVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRG 437
IVFVE K RCD+++ + +G A+ +HG ++Q +R+ L +F++G IL+ATDVASRG
Sbjct: 341 IVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRG 400
Query: 438 LDVMGVAHVVNLDLP 452
LDV V V+N D P
Sbjct: 401 LDVEDVKFVINYDYP 415
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 155/369 (42%), Positives = 224/369 (60%)
Query: 88 VLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSI 147
V R P +++E LR ++TV G V P P+ +F +M + +T PT I
Sbjct: 62 VARLTPYEVDE--LRRKKEITVRGGDV-CPKPVFAFHHANFPQYVMDVLMDQHFTEPTPI 118
Query: 148 QAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELA 207
Q Q P+ALSGRD++G A+TGSGKT A+ +P I H Q + RGDGP+ LVLAPTRELA
Sbjct: 119 QCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELA 178
Query: 208 QQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSL 267
QQ+++ + K+ + GG Q +L GV I +ATPGR +D L+ G T+L
Sbjct: 179 QQVQQVADDYGKC-SRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNL 237
Query: 268 SRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPV 326
R ++++LDEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D
Sbjct: 238 RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLRDYT 296
Query: 327 QVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKT 385
Q+ VG + S N++QI++ E+EK D ++ TI+FVE K
Sbjct: 297 QINVGNLELSANHNILQIVDVCMESEK-DHKLIQLMEEIMAEKEN-----KTIIFVETKR 350
Query: 386 RCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGL--DVMGV 443
RCD+++ + +G A+ +HG ++Q +R+ L +FR+G IL+ATDVASRGL DV V
Sbjct: 351 RCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLGFDVEDV 410
Query: 444 AHVVNLDLP 452
V+N D P
Sbjct: 411 KFVINYDYP 419
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 151/376 (40%), Positives = 237/376 (63%)
Query: 80 NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFH 139
N + S V ++EE R +L ++TV +P P ++SF D+ ++++++
Sbjct: 62 NFYVESPAVAAMTDTEVEEYR-KLR-EITVEGKDIPKP--VKSFRDVGFPDYVLEEVKKA 117
Query: 140 EYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALV 199
+T PT IQ+Q P+A+ GRDL+G AETGSGKT ++ +P I H AQ + GDGP+ LV
Sbjct: 118 GFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLV 177
Query: 200 LAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDH 259
LAPTRELA QI++E S KT + GG Q +L+ GV IV+ATPGR +D
Sbjct: 178 LAPTRELAVQIQQEASKFGSS-SKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 236
Query: 260 LQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALA 318
++ NT+L RV++++LDEADRMLDMGF+PQIR+++ ++ PD+ QTL +SAT P E+E L+
Sbjct: 237 MESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDR-QTLYWSATWPKEVEQLS 295
Query: 319 QEYLTDPVQVKVGKVSSPTAN--VIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPL 376
+++L +P +V +G S AN + QI++ +SE++K ++
Sbjct: 296 KKFLYNPYKVIIGS-SDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSR-------- 346
Query: 377 TIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASR 436
+VF++ K CD+++ L +G A+++HG ++Q++R+ L +FR+G + I+ ATDVA+R
Sbjct: 347 ILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAR 406
Query: 437 GLDVMGVAHVVNLDLP 452
GLDV V +V+N D P
Sbjct: 407 GLDVKDVKYVINYDFP 422
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 157/370 (42%), Positives = 221/370 (59%)
Query: 92 NPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQA 151
N ++ + D+ + + P P+ +F ++ L ++ +I+ +Y +PT +Q A
Sbjct: 117 NEQENTVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNA 176
Query: 152 MPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVA----QTPVG-RGDGPLALVLAPTREL 206
+P+ +GRDL+ CA+TGSGKTAAF P+I + + P G RG PLA++L+PTREL
Sbjct: 177 IPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTREL 236
Query: 207 AQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTS 266
A QI E + S K + GGT + +Q EL GV I+VATPGR D L++G S
Sbjct: 237 ACQIHDEARKFSYQT-GVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVS 295
Query: 267 LSRVSFVILDEADRMLDMGFEPQIREVMQNL----PDKHQTLLFSATMPVEIEALAQEYL 322
L V F+ LDEADRMLDMGFEPQIR+++Q + P QT+LFSAT P EI+ LA ++L
Sbjct: 296 LQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFL 355
Query: 323 TDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVE 382
++ + + VG+V S T ++Q +E V +++K R + LT+VFVE
Sbjct: 356 SNYIFLAVGRVGSSTDLIVQRVEFVHDSDK--RSHLMDLLHAQRENGNQGKQALTLVFVE 413
Query: 383 RKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMG 442
K D + L G A +HG R+Q +RE ALR F+ G T ILVATDVA+RGLD+
Sbjct: 414 TKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPH 473
Query: 443 VAHVVNLDLP 452
VAHVVN DLP
Sbjct: 474 VAHVVNFDLP 483
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 153/375 (40%), Positives = 224/375 (59%)
Query: 80 NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFH 139
N ++ + V R + +++E R + V G P PI F + +M I
Sbjct: 59 NFYQENPDVARRSAQEVEHYRRSKEITVKGRDG----PKPIVKFHEANFPKYVMDVITKQ 114
Query: 140 EYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALV 199
+T PT IQAQ PVALSG+D++G A+TGSGKT ++ +P I H Q + GDGP+ LV
Sbjct: 115 NWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLEHGDGPICLV 174
Query: 200 LAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDH 259
LAPTRELAQQ++ +V A K+ + GG Q +L GV I +ATPGR +D
Sbjct: 175 LAPTRELAQQVQ-QVAAEYGKASRIKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDF 233
Query: 260 LQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALA 318
L+ G T+L R ++++LDEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA
Sbjct: 234 LEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLA 292
Query: 319 QEYLTDPVQVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLT 377
+++L + +Q+ VG + S N++QI++ ++ EK D+ T
Sbjct: 293 EDFLKEYIQINVGALQLSANHNILQIVDVCNDGEKEDKLIRLLEEIMSEKENK------T 346
Query: 378 IVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRG 437
I+FVE K RCD+++ + +G A+ +HG +NQ +R+ L +F+ G IL+ATDVASRG
Sbjct: 347 IIFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQERDWVLNEFKYGKAPILIATDVASRG 406
Query: 438 LDVMGVAHVVNLDLP 452
LDV V V+N D P
Sbjct: 407 LDVEDVKFVINFDYP 421
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 148/373 (39%), Positives = 225/373 (60%)
Query: 82 WKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEY 141
+K V + +++E R + ++TV VP P +E+F + ++ +++ +
Sbjct: 105 YKEHPDVTARSQREVDEFRKKC--EMTVQGRDVPRP--VETFDEAGFPQYVLSEVKAQGF 160
Query: 142 TRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLA 201
+PT+IQ+Q P+ALSGRD++G AETGSGKT ++ +P I H AQ + GDGP+ L+LA
Sbjct: 161 EKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLLAPGDGPIVLILA 220
Query: 202 PTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQ 261
PTRELA QI+ E+ +S + V GG Q +L GV + +ATPGR +D L+
Sbjct: 221 PTRELAVQIQAEISKFGKS-SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLE 279
Query: 262 QGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQE 320
G T+L RV++++LDEADRMLDMGFEPQIR+++ + PD+ QT ++SAT P E+ LA +
Sbjct: 280 AGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDR-QTCMWSATWPKEVRQLASD 338
Query: 321 YLTDPVQVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIV 379
+L + +QV +G + S + QI+E +SE EK DR C +V
Sbjct: 339 FLNNYIQVNIGSMDLSANHRITQIVEVISEFEKRDRMIKHLEKIMENRGNKC------LV 392
Query: 380 FVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLD 439
F K DE++ L +G A+++HG + Q +R+ L +F+ G + I+VATDVASRG+D
Sbjct: 393 FTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGID 452
Query: 440 VMGVAHVVNLDLP 452
V + HV+N D P
Sbjct: 453 VRDITHVINYDYP 465
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 154/357 (43%), Positives = 221/357 (61%)
Query: 102 RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDL 161
R D++V VP P ++ F D +I++ I +T PT IQAQ P+AL GRDL
Sbjct: 148 RTERDISVEGRDVPKP--MKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDL 205
Query: 162 LGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALS-RS 220
+G AETGSGKT A+ +P + H AQ +G+ DGP+ L+LAPTRELA QI++E + RS
Sbjct: 206 IGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRS 265
Query: 221 LDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADR 280
++ + GG Q +LR GV IV+ATPGR +D L+ +T+L RV++++LDEADR
Sbjct: 266 --GVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADR 323
Query: 281 MLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVS-SPTA 338
MLDMGFEPQIR+++ + PD+ QTLL+SAT P E+E LA+++L DP + +G
Sbjct: 324 MLDMGFEPQIRKIVSQIRPDR-QTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQ 382
Query: 339 NVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEG 398
++ Q++E V EK +R K ++FVE K CD+V+ L +G
Sbjct: 383 SINQVIEIVPTPEKYNRLLTLL--------KQLMDGSKILIFVETKRGCDQVTRQLRMDG 434
Query: 399 LHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVL 455
A+A+HG + QS+R+ L +F++G + I+ ATDVA+RGLDV + VVN D P L
Sbjct: 435 WPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTL 491
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 149/363 (41%), Positives = 218/363 (60%)
Query: 92 NPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQA 151
N Q E + R + V VP P +E+F + +M +++ + PT+IQ+Q
Sbjct: 98 NRSQAEVDKFRREHSMAVQGSDVPKP--VETFDEAGFPRYVMDEVKAQGFPAPTAIQSQG 155
Query: 152 MPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIE 211
P+ALSGRD++G AETGSGKT + +P I H AQ + GDGP+ L+LAPTRELA QI+
Sbjct: 156 WPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQ 215
Query: 212 KEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVS 271
E+ +S + V GG Q +L GV + +ATPGR +D L+ G T+L RV+
Sbjct: 216 AEISKFGKS-SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVT 274
Query: 272 FVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKV 330
+++LDEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ +A ++L D +QV +
Sbjct: 275 YLVLDEADRMLDMGFEPQIRKIIGQIRPDR-QTLMWSATWPKEVRNMAADFLQDFIQVNI 333
Query: 331 GKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDE 389
G + S + QI+E VSE+EK DR ++FV K DE
Sbjct: 334 GSLDLSANHRITQIVEVVSESEKRDRMIRHMEKVMDGKDSKNK----ILIFVGTKRVADE 389
Query: 390 VSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNL 449
++ L +G A+++HG + Q++R+ L F+ G + I+VATDVASRG+DV + HV+N
Sbjct: 390 ITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNY 449
Query: 450 DLP 452
D P
Sbjct: 450 DYP 452
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 149/359 (41%), Positives = 221/359 (61%)
Query: 97 EEVRL-RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVA 155
+EV R + ++TV + P P+ +F + ++M I +T PT+IQAQ PVA
Sbjct: 71 QEVETYRRSKEITVRGHN--CPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 156 LSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVK 215
LSG D++G A+TGSGKT ++ +P I H Q + RGDGP+ LVLAPTRELAQQ+++
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 216 ALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVIL 275
R+ K+ + GG Q +L GV I +ATPGR +D L+ G T+L R ++++L
Sbjct: 189 EYCRAC-RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVL 247
Query: 276 DEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVS 334
DEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D + + +G +
Sbjct: 248 DEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLKDYIHINIGALE 306
Query: 335 -SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEA 393
S N++QI++ + EK ++ TIVFVE K RCDE++
Sbjct: 307 LSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENK------TIVFVETKRRCDELTRK 360
Query: 394 LVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+ +G A+ +HG ++Q +R+ L +F++G IL+ATDVASRGLDV V V+N D P
Sbjct: 361 MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYP 419
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 149/359 (41%), Positives = 221/359 (61%)
Query: 97 EEVRL-RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVA 155
+EV R + ++TV + P P+ +F + ++M I +T PT+IQAQ PVA
Sbjct: 128 QEVETYRRSKEITVRGHN--CPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 185
Query: 156 LSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVK 215
LSG D++G A+TGSGKT ++ +P I H Q + RGDGP+ LVLAPTRELAQQ+++
Sbjct: 186 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 245
Query: 216 ALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVIL 275
R+ K+ + GG Q +L GV I +ATPGR +D L+ G T+L R ++++L
Sbjct: 246 EYCRAC-RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVL 304
Query: 276 DEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVS 334
DEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D + + +G +
Sbjct: 305 DEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLKDYIHINIGALE 363
Query: 335 -SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEA 393
S N++QI++ + EK ++ TIVFVE K RCDE++
Sbjct: 364 LSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENK------TIVFVETKRRCDELTRK 417
Query: 394 LVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+ +G A+ +HG ++Q +R+ L +F++G IL+ATDVASRGLDV V V+N D P
Sbjct: 418 MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYP 476
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 149/359 (41%), Positives = 221/359 (61%)
Query: 97 EEVRL-RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVA 155
+EV R + ++TV + P P+ +F + ++M I +T PT+IQAQ PVA
Sbjct: 71 QEVETYRRSKEITVRGHN--CPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 156 LSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVK 215
LSG D++G A+TGSGKT ++ +P I H Q + RGDGP+ LVLAPTRELAQQ+++
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 216 ALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVIL 275
R+ K+ + GG Q +L GV I +ATPGR +D L+ G T+L R ++++L
Sbjct: 189 EYCRAC-RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVL 247
Query: 276 DEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVS 334
DEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D + + +G +
Sbjct: 248 DEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLKDYIHINIGALE 306
Query: 335 -SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEA 393
S N++QI++ + EK ++ TIVFVE K RCDE++
Sbjct: 307 LSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENK------TIVFVETKRRCDELTRK 360
Query: 394 LVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+ +G A+ +HG ++Q +R+ L +F++G IL+ATDVASRGLDV V V+N D P
Sbjct: 361 MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYP 419
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 149/359 (41%), Positives = 221/359 (61%)
Query: 97 EEVRL-RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVA 155
+EV R + ++TV + P P+ +F + ++M I +T PT+IQAQ PVA
Sbjct: 71 QEVETYRRSKEITVRGHN--CPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 156 LSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVK 215
LSG D++G A+TGSGKT ++ +P I H Q + RGDGP+ LVLAPTRELAQQ+++
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 216 ALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVIL 275
R+ K+ + GG Q +L GV I +ATPGR +D L+ G T+L R ++++L
Sbjct: 189 EYCRAC-RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVL 247
Query: 276 DEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVS 334
DEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D + + +G +
Sbjct: 248 DEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLKDYIHINIGALE 306
Query: 335 -SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEA 393
S N++QI++ + EK ++ TIVFVE K RCDE++
Sbjct: 307 LSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENK------TIVFVETKRRCDELTRK 360
Query: 394 LVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+ +G A+ +HG ++Q +R+ L +F++G IL+ATDVASRGLDV V V+N D P
Sbjct: 361 MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYP 419
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 149/359 (41%), Positives = 221/359 (61%)
Query: 97 EEVRL-RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVA 155
+EV R + ++TV + P P+ +F + ++M I +T PT+IQAQ PVA
Sbjct: 71 QEVETYRRSKEITVRGHN--CPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 156 LSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVK 215
LSG D++G A+TGSGKT ++ +P I H Q + RGDGP+ LVLAPTRELAQQ+++
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 216 ALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVIL 275
R+ K+ + GG Q +L GV I +ATPGR +D L+ G T+L R ++++L
Sbjct: 189 EYCRAC-RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVL 247
Query: 276 DEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVS 334
DEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D + + +G +
Sbjct: 248 DEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLKDYIHINIGALE 306
Query: 335 -SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEA 393
S N++QI++ + EK ++ TIVFVE K RCDE++
Sbjct: 307 LSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENK------TIVFVETKRRCDELTRK 360
Query: 394 LVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+ +G A+ +HG ++Q +R+ L +F++G IL+ATDVASRGLDV V V+N D P
Sbjct: 361 MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYP 419
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 147/353 (41%), Positives = 218/353 (61%)
Query: 102 RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDL 161
R + ++TV + P P+ +F + ++M I +T PT+IQAQ PVALSG D+
Sbjct: 77 RRSKEITVRGHN--CPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDM 134
Query: 162 LGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSL 221
+G A+TGSGKT ++ +P I H Q + RGDGP+ LVLAPTRELAQQ+++ R+
Sbjct: 135 VGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRAC 194
Query: 222 DSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRM 281
K+ + GG Q +L GV I +ATPGR +D L+ G T+L R ++++LDEADRM
Sbjct: 195 -RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRM 253
Query: 282 LDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVS-SPTAN 339
LDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D + + +G + S N
Sbjct: 254 LDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHN 312
Query: 340 VIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGL 399
++QI++ + EK ++ TIVFVE K RCDE++ + +G
Sbjct: 313 ILQIVDVCHDVEKDEKLIRLMEEIMSEKENK------TIVFVETKRRCDELTRKMRRDGW 366
Query: 400 HAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
A+ +HG ++Q +R+ L +F++G IL+ATDVASRGLDV V V+N D P
Sbjct: 367 PAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYP 419
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 147/353 (41%), Positives = 218/353 (61%)
Query: 102 RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDL 161
R + ++TV + P P+ +F + ++M I +T PT+IQAQ PVALSG D+
Sbjct: 77 RRSKEITVRGHN--CPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDM 134
Query: 162 LGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSL 221
+G A+TGSGKT ++ +P I H Q + RGDGP+ LVLAPTRELAQQ+++ R+
Sbjct: 135 VGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRAC 194
Query: 222 DSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRM 281
K+ + GG Q +L GV I +ATPGR +D L+ G T+L R ++++LDEADRM
Sbjct: 195 -RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRM 253
Query: 282 LDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVS-SPTAN 339
LDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D + + +G + S N
Sbjct: 254 LDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHN 312
Query: 340 VIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGL 399
++QI++ + EK ++ TIVFVE K RCDE++ + +G
Sbjct: 313 ILQIVDVCHDVEKDEKLIRLMEEIMSEKENK------TIVFVETKRRCDELTRKMRRDGW 366
Query: 400 HAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
A+ +HG ++Q +R+ L +F++G IL+ATDVASRGLDV V V+N D P
Sbjct: 367 PAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYP 419
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 153/356 (42%), Positives = 214/356 (60%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ + + P P+ +F ++ L ++ +I +Y +PT +Q A+P+ L GRDL+ CA
Sbjct: 144 DIPIETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACA 203
Query: 166 ETGSGKTAAFTIPMIQHCVAQTPVGRGDG-----PLALVLAPTRELAQQIEKEVKALSRS 220
+TGSGKTAAF P+I + V R G PLA++L+PTRELA QI E K S
Sbjct: 204 QTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQ 263
Query: 221 LDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADR 280
K + GGT I +Q EL GV I+VATPGR D L++ S+ + F+ LDEADR
Sbjct: 264 T-GVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADR 322
Query: 281 MLDMGFEPQIREVMQ--NLPDK--HQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSP 336
MLDMGFEPQIR++++ ++P + QTLLFSAT P EI+ LA ++L + + + VG+V S
Sbjct: 323 MLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSS 382
Query: 337 TANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVA 396
T ++Q +E V +++K + LT+VFVE K D + L
Sbjct: 383 TDLIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQA--LTLVFVETKRGADSLENWLCI 440
Query: 397 EGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
G A ++HG R Q +RE AL+ F++G T ILVATDVA+RGLD+ VAHVVN DLP
Sbjct: 441 NGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLP 496
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 149/359 (41%), Positives = 220/359 (61%)
Query: 97 EEVRL-RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVA 155
+EV R + ++TV + P P+ +F + ++M I +T PT+IQAQ PVA
Sbjct: 71 QEVETYRRSKEITVRGHN--CPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 156 LSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVK 215
LSG D++G A+TGSGKT ++ +P I H Q + RGDGP+ LVLAPTRELAQQ+++
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 216 ALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVIL 275
R+ K+ + GG Q +L GV I +ATPGR +D L+ G T+L R ++++L
Sbjct: 189 EYCRAC-RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVL 247
Query: 276 DEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVS 334
DEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D + + +G +
Sbjct: 248 DEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLKDYIHINIGALE 306
Query: 335 -SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEA 393
S N++QI++ + EK ++ TIVFVE K RCDE++
Sbjct: 307 LSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENK------TIVFVETKRRCDELTRK 360
Query: 394 LVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+ +G A+ +HG ++Q +R L +F++G IL+ATDVASRGLDV V V+N D P
Sbjct: 361 MRRDGWPAMGIHGDKSQQERGWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYP 419
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 686 (246.5 bits), Expect = 1.8e-67, P = 1.8e-67
Identities = 154/378 (40%), Positives = 234/378 (61%)
Query: 80 NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFH 139
N + ++ + R +++ R L+ +TV + P PI+++ ++ +M ++
Sbjct: 266 NFYIETEEIRRMTKAEVKAYREELD-SITVKG--IDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 140 EYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALV 199
EY++PTSIQAQA+P +SGRD++G A+TGSGKT AF +PM +H + Q + GDGP+A++
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVI 382
Query: 200 LAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDH 259
LAPTRELA Q KE ++ L K A GG I+EQ ++L+ G IVV TPGR +D
Sbjct: 383 LAPTRELAMQTYKEANKFAKPL-GLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDV 441
Query: 260 LQQGN---TSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIE 315
L + T+L RV++++LDEADRM D GFEPQI +V+ N+ PDK QT+LFSAT P +E
Sbjct: 442 LAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDK-QTVLFSATFPRHME 500
Query: 316 ALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFP 375
ALA++ L PV++ VG S +++ Q +E++K +
Sbjct: 501 ALARKVLDKPVEILVGGKSVVCSDITQNAVICAEHQKFLKLLELLGMYYEEGS------- 553
Query: 376 LTIVFVERKTRCDEVSEALVAEGLHAVA-LHGGRNQSDRESALRDFRNGSTNILVATDVA 434
+IVFV+++ + D++ + L+ G ++VA LHGG +Q DR+S++ DF+ G +LVAT VA
Sbjct: 554 -SIVFVDKQEKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVA 612
Query: 435 SRGLDVMGVAHVVNLDLP 452
+RGLDV + VVN D P
Sbjct: 613 ARGLDVKNLILVVNYDCP 630
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 148/375 (39%), Positives = 220/375 (58%)
Query: 80 NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFH 139
N + + + ++ E+R +LN+ V SG+ P P P SF +M I
Sbjct: 220 NFYNEHEEISSLTGAEVVELRRKLNLKV---SGAAP-PKPATSFAHFGFDEQLMHQIRKS 275
Query: 140 EYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALV 199
EYT+PT IQ Q +P+ALSGRD +G A+TGSGKTAAF P++ H + Q + G+GP+A++
Sbjct: 276 EYTQPTPIQCQGVPIALSGRDAIGIAKTGSGKTAAFIWPILVHIMDQKELEPGEGPIAVI 335
Query: 200 LAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDH 259
+ PTREL QQI E K ++ ++ V GG ++ EQ L+ G IVV TPGR +DH
Sbjct: 336 VCPTRELCQQIHAECKRFGKAY-GLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDH 394
Query: 260 LQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALA 318
+++ TSL RV+F++ DEADRM DMGFE Q+R + ++ PD+ QTLLFSAT +IE LA
Sbjct: 395 VKKKATSLQRVTFLVFDEADRMFDMGFEYQVRSIASHVRPDR-QTLLFSATFRKKIEKLA 453
Query: 319 QEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTI 378
++ L DP++V G + ++ QI+E + + D+ +
Sbjct: 454 RDILVDPIRVVQGDIGEANEDITQIVEVLQSGQ--DKWGWLTRRLVEFTSAGS-----VL 506
Query: 379 VFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGL 438
VFV +K C+E++ L+ EG LHG +QS+R + DF+ + +LVATDVA+RGL
Sbjct: 507 VFVTKKANCEELATNLIQEGYSLGLLHGDMDQSERNKVIADFKKKNLPVLVATDVAARGL 566
Query: 439 DVMGVAHVVNLDLPK 453
D+ + VVN D+ +
Sbjct: 567 DIPSIRTVVNYDVAR 581
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 151/383 (39%), Positives = 224/383 (58%)
Query: 74 VPQPVF--NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPS 131
+ P F N + + + P+Q+ ++R +LN+ V SG+ P P P SF
Sbjct: 208 IDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRV---SGAAP-PRPGSSFAHFGFDEQ 263
Query: 132 IMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGR 191
+M I EYT+PT IQ Q +PVALSGRD++G A+TGSGKTAAF PM+ H + Q +
Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323
Query: 192 GDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVA 251
GDGP+A+++ PTREL QQI E K ++ + ++ V GG ++ EQ L+ G IVV
Sbjct: 324 GDGPIAVIVCPTRELCQQIHAECKRFGKAYN-LRSVAVYGGGSMWEQAKALQEGAEIVVC 382
Query: 252 TPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATM 310
TPGR +DH+++ T+L RVS+++ DEADRM DMGFE Q+R + ++ PD+ QTLLFSAT
Sbjct: 383 TPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDR-QTLLFSATF 441
Query: 311 PVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKS 370
+IE LA++ L DP++V G + +V QI+E + K +
Sbjct: 442 RKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGSKWNWLTRRLVEFTSSGS-- 499
Query: 371 CHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVA 430
++FV +K +E++ L EG + LHG +QS+R + DF+ +LVA
Sbjct: 500 ------VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVA 553
Query: 431 TDVASRGLDVMGVAHVVNLDLPK 453
TDVA+RGLD+ + V+N D+ +
Sbjct: 554 TDVAARGLDIPSIKTVINYDVAR 576
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 691 (248.3 bits), Expect = 3.0e-67, P = 3.0e-67
Identities = 150/368 (40%), Positives = 220/368 (59%)
Query: 88 VLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSI 147
+ R E++ R L + V G P PI+ + L I+ ++ Y +P I
Sbjct: 500 ISRMTQEEVNTYRKELELKV---HGK-DVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPI 555
Query: 148 QAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELA 207
Q QA+P+ +SGRD +G A+TGSGKT F +PM++H Q PV GDGP+ LV+APTREL
Sbjct: 556 QTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELV 615
Query: 208 QQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHL--QQGN- 264
QQI +++ S+ L + V GG+ +A+Q SEL+ G IVV TPGR +D L G
Sbjct: 616 QQIHSDIRKFSKPL-GIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKI 674
Query: 265 TSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSATMPVEIEALAQEYLTD 324
T+L RV+F+++DEADRM DMGFEPQI ++QN+ + QT+LFSAT P ++E LA++ L
Sbjct: 675 TNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNK 734
Query: 325 PVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERK 384
PV+++VG S ++ Q++E E+ DR K +VFV+ +
Sbjct: 735 PVEIQVGGRSVVNKDITQLVEVRPES---DRFLRLLELLGEWSEKG-----KILVFVQSQ 786
Query: 385 TRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVA 444
+CD + ++ ++LHGG++Q+DRES + DF+N N+L+AT VA+RGLDV +
Sbjct: 787 EKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELE 846
Query: 445 HVVNLDLP 452
VVN D P
Sbjct: 847 LVVNFDAP 854
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 148/359 (41%), Positives = 220/359 (61%)
Query: 97 EEVRL-RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVA 155
+EV R + ++TV + P P+ +F + ++M I +T PT+IQAQ PVA
Sbjct: 71 QEVETYRRSKEITVRGHN--CPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query: 156 LSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVK 215
LSG D++G A+TGSGKT ++ +P I H Q + RGDGP+ LVLAPTRELAQQ+++
Sbjct: 129 LSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 216 ALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVIL 275
R+ K+ + GG Q +L GV +ATPGR +D L+ G T+L R ++++L
Sbjct: 189 EYCRAC-RLKSTCIYGGAPKGPQIRDLERGVENCIATPGRLIDFLECGKTNLRRTTYLVL 247
Query: 276 DEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVS 334
DEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D + + +G +
Sbjct: 248 DEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLKDYIHINIGALE 306
Query: 335 -SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEA 393
S N++QI++ + EK ++ TIVFVE K RCDE++
Sbjct: 307 LSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENK------TIVFVETKRRCDELTRK 360
Query: 394 LVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+ +G A+ +HG ++Q +R+ L +F++G IL+ATDVASRGLDV V V+N D P
Sbjct: 361 MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYP 419
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 153/385 (39%), Positives = 228/385 (59%)
Query: 77 PVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDI 136
P+ +W P VL + E+ E VR + ++ V +P P PI+SF +M L +I++ +
Sbjct: 141 PIKTSWTPPRYVLSMSEERHERVRKKYHI--LVEGDGIP-P-PIKSFKEMKLPAAILRGL 196
Query: 137 EFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT---PVGRGD 193
+ PT IQ Q +P LSGRD++G A TGSGKT FT+P+I C+ Q P + +
Sbjct: 197 KKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE 256
Query: 194 GPLALVLAPTRELAQQIEKEVKALSRSL--DS---FKTAIVVGGTNIAEQRSELRGGVSI 248
GP L++ P+RELA+Q ++ R L DS + A+ +GG ++ EQ +R GV +
Sbjct: 257 GPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHM 316
Query: 249 VVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSA 308
+VATPGR +D LQ+ SL ++ LDEADRM+DMGFE IR + + QTLLFSA
Sbjct: 317 MVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSA 376
Query: 309 TMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXX 368
TMP +I+ A+ L PV + VG+ + + +VIQ +E V E K+
Sbjct: 377 TMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKM-------VYLLECLQ 429
Query: 369 KSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNIL 428
K+ P P+ ++F E+K D + E L+ +G+ AVA+HGG++Q +R A+ FR G ++L
Sbjct: 430 KT--PPPV-LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVL 486
Query: 429 VATDVASRGLDVMGVAHVVNLDLPK 453
VATDVAS+GLD + HV+N D+P+
Sbjct: 487 VATDVASKGLDFPAIQHVINYDMPE 511
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 150/383 (39%), Positives = 222/383 (57%)
Query: 74 VPQPVF--NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPS 131
+ P F N + + + P+Q+ ++R +LN+ V SG+ P P P SF
Sbjct: 208 IDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRV---SGAAP-PRPGSSFAHFGFDEQ 263
Query: 132 IMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGR 191
+M I EYT+PT IQ Q +PVALSGRD++G A+TGSGKTAAF PM+ H + Q +
Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323
Query: 192 GDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVA 251
GDGP+A+++ PTREL QQI E K ++ + ++ V GG ++ EQ L+ G IVV
Sbjct: 324 GDGPIAVIVCPTRELCQQIHAECKRFGKAYN-LRSVAVYGGGSMWEQAKALQEGAEIVVC 382
Query: 252 TPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATM 310
TPGR +DH+++ T+L RVS+++ DEADRM DMGFE Q+R + ++ PD+ QTLLFSAT
Sbjct: 383 TPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDR-QTLLFSATF 441
Query: 311 PVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKS 370
+IE LA++ L DP++V G + +V QI+E +
Sbjct: 442 RKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGS- 500
Query: 371 CHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVA 430
++FV +K +E++ L EG + LHG +QS+R + DF+ +LVA
Sbjct: 501 ------VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVA 554
Query: 431 TDVASRGLDVMGVAHVVNLDLPK 453
TDVA+RGLD+ + V+N D+ +
Sbjct: 555 TDVAARGLDIPSIKTVINYDVAR 577
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 150/383 (39%), Positives = 222/383 (57%)
Query: 74 VPQPVF--NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPS 131
+ P F N + + + P+Q+ ++R +LN+ V SG+ P P P SF
Sbjct: 208 IDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRV---SGAAP-PRPGSSFAHFGFDEQ 263
Query: 132 IMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGR 191
+M I EYT+PT IQ Q +PVALSGRD++G A+TGSGKTAAF PM+ H + Q +
Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323
Query: 192 GDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVA 251
GDGP+A+++ PTREL QQI E K ++ + ++ V GG ++ EQ L+ G IVV
Sbjct: 324 GDGPIAVIVCPTRELCQQIHAECKRFGKAYN-LRSVAVYGGGSMWEQAKALQEGAEIVVC 382
Query: 252 TPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATM 310
TPGR +DH+++ T+L RVS+++ DEADRM DMGFE Q+R + ++ PD+ QTLLFSAT
Sbjct: 383 TPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDR-QTLLFSATF 441
Query: 311 PVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKS 370
+IE LA++ L DP++V G + +V QI+E +
Sbjct: 442 RKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGS- 500
Query: 371 CHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVA 430
++FV +K +E++ L EG + LHG +QS+R + DF+ +LVA
Sbjct: 501 ------VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVA 554
Query: 431 TDVASRGLDVMGVAHVVNLDLPK 453
TDVA+RGLD+ + V+N D+ +
Sbjct: 555 TDVAARGLDIPSIKTVINYDVAR 577
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 150/383 (39%), Positives = 222/383 (57%)
Query: 74 VPQPVF--NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPS 131
+ P F N + + + P+Q+ ++R +LN+ V SG+ P P P SF
Sbjct: 208 IDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRV---SGAAP-PRPGSSFAHFGFDEQ 263
Query: 132 IMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGR 191
+M I EYT+PT IQ Q +PVALSGRD++G A+TGSGKTAAF PM+ H + Q +
Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323
Query: 192 GDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVA 251
GDGP+A+++ PTREL QQI E K ++ + ++ V GG ++ EQ L+ G IVV
Sbjct: 324 GDGPIAVIVCPTRELCQQIHAECKRFGKAYN-LRSVAVYGGGSMWEQAKALQEGAEIVVC 382
Query: 252 TPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATM 310
TPGR +DH+++ T+L RVS+++ DEADRM DMGFE Q+R + ++ PD+ QTLLFSAT
Sbjct: 383 TPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDR-QTLLFSATF 441
Query: 311 PVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKS 370
+IE LA++ L DP++V G + +V QI+E +
Sbjct: 442 RKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGS- 500
Query: 371 CHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVA 430
++FV +K +E++ L EG + LHG +QS+R + DF+ +LVA
Sbjct: 501 ------VLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVA 554
Query: 431 TDVASRGLDVMGVAHVVNLDLPK 453
TDVA+RGLD+ + V+N D+ +
Sbjct: 555 TDVAARGLDIPSIKTVINYDVAR 577
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 148/387 (38%), Positives = 221/387 (57%)
Query: 76 QPVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKD 135
+P+ W+P + R + E E R RL + G P PI SF +M S+++
Sbjct: 148 EPIVTAWRPPGHIRRQSQEDYEIQRKRLGIS---CEGD-HIPPPIGSFLEMKFPKSLLEF 203
Query: 136 IEFHE-YTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT---PVGR 191
++ + PT+IQ Q +PVALSGRD++G A TGSGKT F +P++ C+ Q P R
Sbjct: 204 MQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMR 263
Query: 192 GDGPLALVLAPTRELAQQIEKEV----KALSRS-LDSFKTAIVVGGTNIAEQRSELRGGV 246
+GP L++ P+RELA+QI + AL ++ L + + +GG I EQ ++R G+
Sbjct: 264 SEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGI 323
Query: 247 SIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLF 306
IVVATPGR D L + +L +++LDEADRMLDMGFE +I+ + + QTLLF
Sbjct: 324 HIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLF 383
Query: 307 SATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXX 366
SATMP +I+ A+ L P+ V VG+ + + NV+Q LE V K+ R
Sbjct: 384 SATMPRKIQFFAKSALVKPIVVNVGRAGAASLNVLQELEFVRSENKLVRVLECLQKTS-- 441
Query: 367 XXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTN 426
P ++F E+K D + E L+ +G+ ++HGG++QSDR + + FR +
Sbjct: 442 --------PKVLIFAEKKVDVDNIYEYLLVKGVEVASIHGGKDQSDRHAGIEAFRKNEKD 493
Query: 427 ILVATDVASRGLDVMGVAHVVNLDLPK 453
+LVATDVAS+GLD G+ HV+N D+P+
Sbjct: 494 VLVATDVASKGLDFQGIEHVINFDMPE 520
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 150/383 (39%), Positives = 222/383 (57%)
Query: 74 VPQPVF--NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPS 131
+ P F N + + + P+Q+ ++R +LN+ V SG+ P P P SF
Sbjct: 208 IDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRV---SGAAP-PRPGSSFAHFGFDEQ 263
Query: 132 IMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGR 191
+M I EYT+PT IQ Q +PVALSGRD++G A+TGSGKTAAF PM+ H + Q +
Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323
Query: 192 GDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVA 251
GDGP+A+++ PTREL QQI E K ++ + ++ V GG ++ EQ L+ G IVV
Sbjct: 324 GDGPIAVIVCPTRELCQQIHAECKRFGKAYN-LRSVAVYGGGSMWEQAKALQEGAEIVVC 382
Query: 252 TPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATM 310
TPGR +DH+++ T+L RVS+++ DEADRM DMGFE Q+R + ++ PD+ QTLLFSAT
Sbjct: 383 TPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDR-QTLLFSATF 441
Query: 311 PVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKS 370
+IE LA++ L DP++V G + +V QI+E +
Sbjct: 442 RKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGS- 500
Query: 371 CHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVA 430
++FV +K +E++ L EG + LHG +QS+R + DF+ +LVA
Sbjct: 501 ------VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVILDFKKKDIPVLVA 554
Query: 431 TDVASRGLDVMGVAHVVNLDLPK 453
TDVA+RGLD+ + V+N D+ +
Sbjct: 555 TDVAARGLDIPSIKTVINYDVAR 577
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 150/383 (39%), Positives = 222/383 (57%)
Query: 74 VPQPVF--NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPS 131
+ P F N + + + P+Q+ ++R +LN+ V SG+ P P P SF
Sbjct: 208 IDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRV---SGAAP-PRPGSSFAHFGFDEQ 263
Query: 132 IMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGR 191
+M I EYT+PT IQ Q +PVALSGRD++G A+TGSGKTAAF PM+ H + Q +
Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323
Query: 192 GDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVA 251
GDGP+A+++ PTREL QQI E K ++ + ++ V GG ++ EQ L+ G IVV
Sbjct: 324 GDGPIAVIVCPTRELCQQIHAEGKRFGKAYN-LRSVAVYGGGSMWEQAKALQEGAEIVVC 382
Query: 252 TPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATM 310
TPGR +DH+++ T+L RVS+++ DEADRM DMGFE Q+R + ++ PD+ QTLLFSAT
Sbjct: 383 TPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDR-QTLLFSATF 441
Query: 311 PVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKS 370
+IE LA++ L DP++V G + +V QI+E +
Sbjct: 442 RKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGS- 500
Query: 371 CHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVA 430
++FV +K +E++ L EG + LHG +QS+R + DF+ +LVA
Sbjct: 501 ------VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVA 554
Query: 431 TDVASRGLDVMGVAHVVNLDLPK 453
TDVA+RGLD+ + V+N D+ +
Sbjct: 555 TDVAARGLDIPSIKTVINYDVAR 577
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 156/400 (39%), Positives = 231/400 (57%)
Query: 66 RRSYASH-PVPQPVFNNWKPSDRVLRFNPE---QIEEVRLRLNVDVT-------VASGSV 114
R Y S P V +WK ++ ++ F + + E VR R + +VT + +
Sbjct: 57 RNFYESDGPGANLVKKDWK-NETLIPFQKDFYKEHENVRNRSDAEVTEYRKEKEIVVHGL 115
Query: 115 PAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAA 174
P P+ +F + ++K+++ + PT IQ QA P+A+SGRD++G + TGSGKT +
Sbjct: 116 NVPKPVTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLS 175
Query: 175 FTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTN 234
+ +P I H AQ + GDGP+ LVLAPTRELA QI++E +S + V GG
Sbjct: 176 YCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECTKFGKS-SRIRNTCVYGGVP 234
Query: 235 IAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVM 294
Q +L GV I +ATPGR LD L T+L RV++++LDEADRMLDMGFEPQIR+++
Sbjct: 235 RGPQIRDLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIV 294
Query: 295 QNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVS-SPTANVIQILEKVSENEK 352
+ PD+ QT++FSAT P E++ LA++YL D +QV VG + + + N+ QI+E V +K
Sbjct: 295 DQIRPDR-QTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADK 353
Query: 353 VDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSD 412
R ++F K D+++ L +G A+A+HG + Q +
Sbjct: 354 RARLGKDIEEVLKDRDNK------VLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDE 407
Query: 413 RESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
R+ L +FR G + I+VATDVASRG+DV G+ HV N D P
Sbjct: 408 RDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNYDFP 447
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 147/362 (40%), Positives = 218/362 (60%)
Query: 94 EQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMP 153
++ + R RL + V SG P+++F D IM I+ Y +PT+IQ QA+P
Sbjct: 205 QETTDYRQRLGIRV---SG-FDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALP 260
Query: 154 VALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKE 213
+ LSGRD++G A+TGSGKTAAF +PMI H + Q + R +GP+ ++ APTRELA QI E
Sbjct: 261 IVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLE 320
Query: 214 VKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFV 273
K S++ + + V GG + EQ EL+ G IVVATPGR +D L+ ++ R S++
Sbjct: 321 AKKFSKAY-GLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYL 379
Query: 274 ILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGK 332
+LDEADRM D+GFEPQ+R ++ + PD+ QTLLFSATMP ++E LA+E L+DP++V VG+
Sbjct: 380 VLDEADRMFDLGFEPQVRSIVGQIRPDR-QTLLFSATMPWKVEKLAREILSDPIRVTVGE 438
Query: 333 VSSPTANVIQILEKV-SENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVS 391
V ++ Q++ + S+ EK+ +VF +K DE+
Sbjct: 439 VGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGD--------VLVFASKKATVDEIE 490
Query: 392 EALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDL 451
L ALHG ++Q+ R L+ F++G ++L+ATDVA+RGLD+ + VVN D+
Sbjct: 491 AQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDI 550
Query: 452 PK 453
K
Sbjct: 551 AK 552
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 679 (244.1 bits), Expect = 2.7e-66, P = 2.7e-66
Identities = 149/362 (41%), Positives = 222/362 (61%)
Query: 96 IEEVRL-RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPV 154
+EEV + RL ++ G P PI+S+ + I+ ++ H Y +PT IQ QA+P
Sbjct: 347 LEEVNVFRLEMEGITVKGK-GCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPA 405
Query: 155 ALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEV 214
+SGRDL+G A+TGSGKT AF +PM +H + Q + G+GP+A+++ PTRELA QI KE
Sbjct: 406 IMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKEC 465
Query: 215 KALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGN---TSLSRVS 271
K S++L + V GGT I+EQ +EL+ G I+V TPGR +D L + T+L RV+
Sbjct: 466 KKFSKTL-GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVT 524
Query: 272 FVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKV 330
+V+LDEADRM DMGFEPQ+ ++ N+ PD+ QT++FSAT P +EALA+ L+ P++V+V
Sbjct: 525 YVVLDEADRMFDMGFEPQVMRIVDNVRPDR-QTVMFSATFPRAMEALARRILSKPIEVQV 583
Query: 331 GKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEV 390
G S ++V Q + + E +K + I+FV+++ D +
Sbjct: 584 GGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS--------VIIFVDKQEHADGL 635
Query: 391 SEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLD 450
+ L+ ++LHGG +Q DR+S + DF+NG+ +LVAT VA+RGLDV + VVN
Sbjct: 636 LKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYS 695
Query: 451 LP 452
P
Sbjct: 696 CP 697
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 152/385 (39%), Positives = 227/385 (58%)
Query: 77 PVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDI 136
P+ +W P VL + E+ E VR + ++ V +P P PI+SF +M +I++ +
Sbjct: 141 PIKTSWTPPRYVLSMSEERHERVRKKYHI--LVEGDGIP-P-PIKSFKEMKFPAAILRGL 196
Query: 137 EFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT---PVGRGD 193
+ PT IQ Q +P LSGRD++G A TGSGKT FT+P+I C+ Q P + +
Sbjct: 197 KKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE 256
Query: 194 GPLALVLAPTRELAQQIEKEVKALSRSL--DS---FKTAIVVGGTNIAEQRSELRGGVSI 248
GP L++ P+RELA+Q ++ R L DS + A+ +GG ++ EQ +R GV +
Sbjct: 257 GPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHM 316
Query: 249 VVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSA 308
+VATPGR +D LQ+ SL ++ LDEADRM+DMGFE IR + + QTLLFSA
Sbjct: 317 MVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSA 376
Query: 309 TMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXX 368
TMP +I+ A+ L PV + VG+ + + +VIQ +E V E K+
Sbjct: 377 TMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKM-------VYLLECLQ 429
Query: 369 KSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNIL 428
K+ P P+ ++F E+K D + E L+ +G+ AVA+HGG++Q +R A+ FR G ++L
Sbjct: 430 KT--PPPV-LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVL 486
Query: 429 VATDVASRGLDVMGVAHVVNLDLPK 453
VATDVAS+GLD + HV+N D+P+
Sbjct: 487 VATDVASKGLDFPAIQHVINYDMPE 511
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 153/385 (39%), Positives = 227/385 (58%)
Query: 77 PVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDI 136
P+ +W P VL + E+ E VR + ++ V +P P PI+SF +M L +I++ +
Sbjct: 140 PIKTSWTPPRYVLSMSEERHERVRKKYHI--LVEGDGIP-P-PIKSFKEMKLPAAILRGL 195
Query: 137 EFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT---PVGRGD 193
+ PT IQ Q +P LSGRD++G A TGSGKT FT+P+I C+ Q P + +
Sbjct: 196 KKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE 255
Query: 194 GPLALVLAPTRELAQQIEKEVKALSRSL--DS---FKTAIVVGGTNIAEQRSELRGGVSI 248
GP L++ P+RELA+Q ++ R L DS A+ +GG ++ EQ +R GV I
Sbjct: 256 GPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLHCALCIGGVSLKEQMETMRHGVHI 315
Query: 249 VVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSA 308
+VATPGR +D LQ+ SL ++ LDEADRM+DMGFE IR + + QTLLFSA
Sbjct: 316 MVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSA 375
Query: 309 TMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXX 368
TMP +I+ A+ L PV + VG+ + + +VIQ +E V E K+
Sbjct: 376 TMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKM-------VYLLECLQ 428
Query: 369 KSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNIL 428
K+ P P+ ++F ++K D + E L+ +G+ AVA+HGG++Q +R A+ FR G ++L
Sbjct: 429 KT--PPPV-LIFAKKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVL 485
Query: 429 VATDVASRGLDVMGVAHVVNLDLPK 453
VATDVAS+GLD + HV+N D+P+
Sbjct: 486 VATDVASKGLDFPAIQHVINYDMPE 510
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 152/385 (39%), Positives = 227/385 (58%)
Query: 77 PVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDI 136
P+ +W P VL + E+ E VR + ++ V +P P PI+SF +M +I++ +
Sbjct: 141 PIKTSWTPPRYVLSMSEERHERVRKKYHI--LVEGDGIP-P-PIKSFKEMKFPAAILRGL 196
Query: 137 EFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT---PVGRGD 193
+ PT IQ Q +P LSGRD++G A TGSGKT FT+P+I C+ Q P + +
Sbjct: 197 KKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE 256
Query: 194 GPLALVLAPTRELAQQIEKEVKALSRSL--DS---FKTAIVVGGTNIAEQRSELRGGVSI 248
GP L++ P+RELA+Q ++ R L DS + A+ +GG ++ EQ +R GV +
Sbjct: 257 GPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHM 316
Query: 249 VVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSA 308
+VATPGR +D LQ+ SL ++ LDEADRM+DMGFE IR + + QTLLFSA
Sbjct: 317 MVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSA 376
Query: 309 TMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXX 368
TMP +I+ A+ L PV + VG+ + + +VIQ +E V E K+
Sbjct: 377 TMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKM-------VYLLECLQ 429
Query: 369 KSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNIL 428
K+ P P+ ++F E+K D + E L+ +G+ AVA+HGG++Q +R A+ FR G ++L
Sbjct: 430 KT--PPPV-LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVL 486
Query: 429 VATDVASRGLDVMGVAHVVNLDLPK 453
VATDVAS+GLD + HV+N D+P+
Sbjct: 487 VATDVASKGLDFPAIQHVINYDMPE 511
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 152/385 (39%), Positives = 227/385 (58%)
Query: 77 PVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDI 136
P+ +W P VL + E+ E VR + ++ V +P P PI+SF +M +I++ +
Sbjct: 141 PIKTSWTPPRYVLSMSEERHERVRKKYHI--LVEGDGIP-P-PIKSFKEMKFPAAILRGL 196
Query: 137 EFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT---PVGRGD 193
+ PT IQ Q +P LSGRD++G A TGSGKT FT+P+I C+ Q P + +
Sbjct: 197 KKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE 256
Query: 194 GPLALVLAPTRELAQQIEKEVKALSRSL--DS---FKTAIVVGGTNIAEQRSELRGGVSI 248
GP L++ P+RELA+Q ++ R L DS + A+ +GG ++ EQ +R GV +
Sbjct: 257 GPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHM 316
Query: 249 VVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSA 308
+VATPGR +D LQ+ SL ++ LDEADRM+DMGFE IR + + QTLLFSA
Sbjct: 317 MVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSA 376
Query: 309 TMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXX 368
TMP +I+ A+ L PV + VG+ + + +VIQ +E V E K+
Sbjct: 377 TMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKM-------VYLLECLQ 429
Query: 369 KSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNIL 428
K+ P P+ ++F E+K D + E L+ +G+ AVA+HGG++Q +R A+ FR G ++L
Sbjct: 430 KT--PPPV-LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVL 486
Query: 429 VATDVASRGLDVMGVAHVVNLDLPK 453
VATDVAS+GLD + HV+N D+P+
Sbjct: 487 VATDVASKGLDFPAIQHVINYDMPE 511
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 152/385 (39%), Positives = 227/385 (58%)
Query: 77 PVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDI 136
P+ +W P VL + E+ E VR + ++ V +P P PI+SF +M +I++ +
Sbjct: 168 PIKTSWTPPRYVLSMSEERHERVRKKYHI--LVEGDGIP-P-PIKSFKEMKFPAAILRGL 223
Query: 137 EFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT---PVGRGD 193
+ PT IQ Q +P LSGRD++G A TGSGKT FT+P+I C+ Q P + +
Sbjct: 224 KKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE 283
Query: 194 GPLALVLAPTRELAQQIEKEVKALSRSL--DS---FKTAIVVGGTNIAEQRSELRGGVSI 248
GP L++ P+RELA+Q ++ R L DS + A+ +GG ++ EQ +R GV +
Sbjct: 284 GPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHM 343
Query: 249 VVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSA 308
+VATPGR +D LQ+ SL ++ LDEADRM+DMGFE IR + + QTLLFSA
Sbjct: 344 MVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSA 403
Query: 309 TMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXX 368
TMP +I+ A+ L PV + VG+ + + +VIQ +E V E K+
Sbjct: 404 TMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKM-------VYLLECLQ 456
Query: 369 KSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNIL 428
K+ P P+ ++F E+K D + E L+ +G+ AVA+HGG++Q +R A+ FR G ++L
Sbjct: 457 KT--PPPV-LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVL 513
Query: 429 VATDVASRGLDVMGVAHVVNLDLPK 453
VATDVAS+GLD + HV+N D+P+
Sbjct: 514 VATDVASKGLDFPAIQHVINYDMPE 538
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 152/385 (39%), Positives = 227/385 (58%)
Query: 77 PVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDI 136
P+ +W P VL + E+ E VR + ++ V +P P PI+SF +M +I++ +
Sbjct: 159 PIKTSWTPPRYVLSMSEERHERVRKKYHI--LVEGDGIP-P-PIKSFKEMKFPAAILRGL 214
Query: 137 EFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT---PVGRGD 193
+ PT IQ Q +P LSGRD++G A TGSGKT FT+P+I C+ Q P + +
Sbjct: 215 KKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE 274
Query: 194 GPLALVLAPTRELAQQIEKEVKALSRSL--DS---FKTAIVVGGTNIAEQRSELRGGVSI 248
GP L++ P+RELA+Q ++ R L DS + A+ +GG ++ EQ +R GV +
Sbjct: 275 GPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHM 334
Query: 249 VVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSA 308
+VATPGR +D LQ+ SL ++ LDEADRM+DMGFE IR + + QTLLFSA
Sbjct: 335 MVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSA 394
Query: 309 TMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXX 368
TMP +I+ A+ L PV + VG+ + + +VIQ +E V E K+
Sbjct: 395 TMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKM-------VYLLECLQ 447
Query: 369 KSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNIL 428
K+ P P+ ++F E+K D + E L+ +G+ AVA+HGG++Q +R A+ FR G ++L
Sbjct: 448 KT--PPPV-LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVL 504
Query: 429 VATDVASRGLDVMGVAHVVNLDLPK 453
VATDVAS+GLD + HV+N D+P+
Sbjct: 505 VATDVASKGLDFPAIQHVINYDMPE 529
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 152/385 (39%), Positives = 227/385 (58%)
Query: 77 PVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDI 136
P+ +W P VL + E+ E VR + ++ V +P P PI+SF +M +I++ +
Sbjct: 141 PIKTSWTPPRYVLSMSEERHERVRKKYHI--LVEGDGIP-P-PIKSFKEMKFPAAILRGL 196
Query: 137 EFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT---PVGRGD 193
+ PT IQ Q +P LSGRD++G A TGSGKT FT+P+I C+ Q P + +
Sbjct: 197 KKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE 256
Query: 194 GPLALVLAPTRELAQQIEKEVKALSRSL--DS---FKTAIVVGGTNIAEQRSELRGGVSI 248
GP L++ P+RELA+Q ++ R L DS + A+ +GG ++ EQ +R GV +
Sbjct: 257 GPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHM 316
Query: 249 VVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSA 308
+VATPGR +D LQ+ SL ++ LDEADRM+DMGFE IR + + QTLLFSA
Sbjct: 317 MVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSA 376
Query: 309 TMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXX 368
TMP +I+ A+ L PV + VG+ + + +VIQ +E V E K+
Sbjct: 377 TMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKM-------VYLLECLQ 429
Query: 369 KSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNIL 428
K+ P P+ ++F E+K D + E L+ +G+ AVA+HGG++Q +R A+ FR G ++L
Sbjct: 430 KT--PPPV-LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVL 486
Query: 429 VATDVASRGLDVMGVAHVVNLDLPK 453
VATDVAS+GLD + HV+N D+P+
Sbjct: 487 VATDVASKGLDFPAIQHVINYDMPE 511
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 152/356 (42%), Positives = 210/356 (58%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P P+ +F D+ L ++ +I +Y RPT +Q A+P+ L+ RDL+ CA
Sbjct: 136 DIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACA 195
Query: 166 ETGSGKTAAFTIPMIQHCVAQTPVGRGDG-----PLALVLAPTRELAQQIEKEVKALSRS 220
+TGSGKTAAF P+I + V R G P A++L+PTRELA QI E K S
Sbjct: 196 QTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQ 255
Query: 221 LDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADR 280
K + GGT I +Q EL G I+VATPGR D L++ S+ + F+ LDEADR
Sbjct: 256 T-GVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADR 314
Query: 281 MLDMGFEPQIREVMQ--NLPDK--HQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSP 336
MLDMGFEPQIR++++ ++P + QT+LFSAT P +I+ LA +++++ + + VG+V S
Sbjct: 315 MLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSS 374
Query: 337 TANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVA 396
T + Q +E V E++K K LT+VFVE K D + L
Sbjct: 375 TDLITQRVEFVQESDKRSHLMDLLHAQRETQDKQS----LTLVFVETKRGADTLENWLCM 430
Query: 397 EGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
A ++HG R Q +RE ALR F+ G T ILVATDVA+RGLD+ VAHVVN DLP
Sbjct: 431 NEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLP 486
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 677 (243.4 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 149/361 (41%), Positives = 221/361 (61%)
Query: 97 EEVRL-RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVA 155
EEV + RL ++ G P PI+S+ + I+ ++ H Y +PT IQ QA+P
Sbjct: 348 EEVNVFRLEMEGITVKGK-GCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAI 406
Query: 156 LSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVK 215
+SGRDL+G A+TGSGKT AF +PM +H + Q + G+GP+A+++ PTRELA QI KE K
Sbjct: 407 MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECK 466
Query: 216 ALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGN---TSLSRVSF 272
S++L + V GGT I+EQ +EL+ G I+V TPGR +D L + T+L RV++
Sbjct: 467 KFSKTL-GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTY 525
Query: 273 VILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVG 331
V+LDEADRM DMGFEPQ+ ++ N+ PD+ QT++FSAT P +EALA+ L+ P++V+VG
Sbjct: 526 VVLDEADRMFDMGFEPQVMRIVDNVRPDR-QTVMFSATFPRAMEALARRILSKPIEVQVG 584
Query: 332 KVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVS 391
S ++V Q + + E +K + I+FV+++ D +
Sbjct: 585 GRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS--------VIIFVDKQEHADGLL 636
Query: 392 EALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDL 451
+ L+ ++LHGG +Q DR+S + DF+NG+ +LVAT VA+RGLDV + VVN
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSC 696
Query: 452 P 452
P
Sbjct: 697 P 697
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 677 (243.4 bits), Expect = 4.6e-66, P = 4.6e-66
Identities = 149/361 (41%), Positives = 221/361 (61%)
Query: 97 EEVRL-RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVA 155
EEV + RL ++ G P PI+S+ + I+ ++ H Y +PT IQ QA+P
Sbjct: 348 EEVNVFRLEMEGITVKGK-GCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAI 406
Query: 156 LSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVK 215
+SGRDL+G A+TGSGKT AF +PM +H + Q + G+GP+A+++ PTRELA QI KE K
Sbjct: 407 MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECK 466
Query: 216 ALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGN---TSLSRVSF 272
S++L + V GGT I+EQ +EL+ G I+V TPGR +D L + T+L RV++
Sbjct: 467 KFSKTL-GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTY 525
Query: 273 VILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVG 331
V+LDEADRM DMGFEPQ+ ++ N+ PD+ QT++FSAT P +EALA+ L+ P++V+VG
Sbjct: 526 VVLDEADRMFDMGFEPQVMRIVDNVRPDR-QTVMFSATFPRAMEALARRILSKPIEVQVG 584
Query: 332 KVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVS 391
S ++V Q + + E +K + I+FV+++ D +
Sbjct: 585 GRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS--------VIIFVDKQEHADGLL 636
Query: 392 EALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDL 451
+ L+ ++LHGG +Q DR+S + DF+NG+ +LVAT VA+RGLDV + VVN
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSC 696
Query: 452 P 452
P
Sbjct: 697 P 697
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 677 (243.4 bits), Expect = 4.6e-66, P = 4.6e-66
Identities = 149/361 (41%), Positives = 221/361 (61%)
Query: 97 EEVRL-RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVA 155
EEV + RL ++ G P PI+S+ + I+ ++ H Y +PT IQ QA+P
Sbjct: 348 EEVNVFRLEMEGITVKGK-GCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAI 406
Query: 156 LSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVK 215
+SGRDL+G A+TGSGKT AF +PM +H + Q + G+GP+A+++ PTRELA QI KE K
Sbjct: 407 MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECK 466
Query: 216 ALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGN---TSLSRVSF 272
S++L + V GGT I+EQ +EL+ G I+V TPGR +D L + T+L RV++
Sbjct: 467 KFSKTL-GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTY 525
Query: 273 VILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVG 331
V+LDEADRM DMGFEPQ+ ++ N+ PD+ QT++FSAT P +EALA+ L+ P++V+VG
Sbjct: 526 VVLDEADRMFDMGFEPQVMRIVDNVRPDR-QTVMFSATFPRAMEALARRILSKPIEVQVG 584
Query: 332 KVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVS 391
S ++V Q + + E +K + I+FV+++ D +
Sbjct: 585 GRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS--------VIIFVDKQEHADGLL 636
Query: 392 EALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDL 451
+ L+ ++LHGG +Q DR+S + DF+NG+ +LVAT VA+RGLDV + VVN
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSC 696
Query: 452 P 452
P
Sbjct: 697 P 697
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 677 (243.4 bits), Expect = 4.6e-66, P = 4.6e-66
Identities = 149/361 (41%), Positives = 221/361 (61%)
Query: 97 EEVRL-RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVA 155
EEV + RL ++ G P PI+S+ + I+ ++ H Y +PT IQ QA+P
Sbjct: 348 EEVNVFRLEMEGITVKGK-GCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAI 406
Query: 156 LSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVK 215
+SGRDL+G A+TGSGKT AF +PM +H + Q + G+GP+A+++ PTRELA QI KE K
Sbjct: 407 MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECK 466
Query: 216 ALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGN---TSLSRVSF 272
S++L + V GGT I+EQ +EL+ G I+V TPGR +D L + T+L RV++
Sbjct: 467 KFSKTL-GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTY 525
Query: 273 VILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVG 331
V+LDEADRM DMGFEPQ+ ++ N+ PD+ QT++FSAT P +EALA+ L+ P++V+VG
Sbjct: 526 VVLDEADRMFDMGFEPQVMRIVDNVRPDR-QTVMFSATFPRAMEALARRILSKPIEVQVG 584
Query: 332 KVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVS 391
S ++V Q + + E +K + I+FV+++ D +
Sbjct: 585 GRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS--------VIIFVDKQEHADGLL 636
Query: 392 EALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDL 451
+ L+ ++LHGG +Q DR+S + DF+NG+ +LVAT VA+RGLDV + VVN
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSC 696
Query: 452 P 452
P
Sbjct: 697 P 697
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 677 (243.4 bits), Expect = 4.6e-66, P = 4.6e-66
Identities = 149/361 (41%), Positives = 221/361 (61%)
Query: 97 EEVRL-RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVA 155
EEV + RL ++ G P PI+S+ + I+ ++ H Y +PT IQ QA+P
Sbjct: 348 EEVNVFRLEMEGITVKGK-GCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAI 406
Query: 156 LSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVK 215
+SGRDL+G A+TGSGKT AF +PM +H + Q + G+GP+A+++ PTRELA QI KE K
Sbjct: 407 MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECK 466
Query: 216 ALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGN---TSLSRVSF 272
S++L + V GGT I+EQ +EL+ G I+V TPGR +D L + T+L RV++
Sbjct: 467 KFSKTL-GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTY 525
Query: 273 VILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVG 331
V+LDEADRM DMGFEPQ+ ++ N+ PD+ QT++FSAT P +EALA+ L+ P++V+VG
Sbjct: 526 VVLDEADRMFDMGFEPQVMRIVDNVRPDR-QTVMFSATFPRAMEALARRILSKPIEVQVG 584
Query: 332 KVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVS 391
S ++V Q + + E +K + I+FV+++ D +
Sbjct: 585 GRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS--------VIIFVDKQEHADGLL 636
Query: 392 EALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDL 451
+ L+ ++LHGG +Q DR+S + DF+NG+ +LVAT VA+RGLDV + VVN
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSC 696
Query: 452 P 452
P
Sbjct: 697 P 697
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 677 (243.4 bits), Expect = 4.6e-66, P = 4.6e-66
Identities = 149/361 (41%), Positives = 221/361 (61%)
Query: 97 EEVRL-RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVA 155
EEV + RL ++ G P PI+S+ + I+ ++ H Y +PT IQ QA+P
Sbjct: 348 EEVNVFRLEMEGITVKGK-GCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAI 406
Query: 156 LSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVK 215
+SGRDL+G A+TGSGKT AF +PM +H + Q + G+GP+A+++ PTRELA QI KE K
Sbjct: 407 MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECK 466
Query: 216 ALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGN---TSLSRVSF 272
S++L + V GGT I+EQ +EL+ G I+V TPGR +D L + T+L RV++
Sbjct: 467 KFSKTL-GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTY 525
Query: 273 VILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVG 331
V+LDEADRM DMGFEPQ+ ++ N+ PD+ QT++FSAT P +EALA+ L+ P++V+VG
Sbjct: 526 VVLDEADRMFDMGFEPQVMRIVDNVRPDR-QTVMFSATFPRAMEALARRILSKPIEVQVG 584
Query: 332 KVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVS 391
S ++V Q + + E +K + I+FV+++ D +
Sbjct: 585 GRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS--------VIIFVDKQEHADGLL 636
Query: 392 EALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDL 451
+ L+ ++LHGG +Q DR+S + DF+NG+ +LVAT VA+RGLDV + VVN
Sbjct: 637 KDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSC 696
Query: 452 P 452
P
Sbjct: 697 P 697
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 672 (241.6 bits), Expect = 1.4e-65, P = 1.4e-65
Identities = 151/366 (41%), Positives = 224/366 (61%)
Query: 95 QIEEVRLRLNVDVTVASGSVPAPAPIESFTDMC-LHPSIMKDIEFHEYTRPTSIQAQAMP 153
+ E LRL +D SG P P++ ++ +C L I+ I EY +PT+IQ QA+P
Sbjct: 353 EAEVAELRLELDGIKVSGK-DVPKPVQKWS-LCGLTRPILDVIAKLEYDKPTAIQMQALP 410
Query: 154 VALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKE 213
V +SGRD++G A+TGSGKT AF +PM +H Q PV +GP+ L+L PTRELA QI ++
Sbjct: 411 VIMSGRDVVGVAKTGSGKTMAFLLPMFRHIKDQEPVKDNEGPIGLILTPTRELAVQIFRD 470
Query: 214 VKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHL--QQGNT-SLSRV 270
K ++L + GG I +Q ++L+ G IVVAT GR +D L QG SL R
Sbjct: 471 CKPFLKTL-GLRAVCAYGGPPIKDQIADLKRGAEIVVATTGRMIDLLAANQGRVVSLRRT 529
Query: 271 SFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVK 329
++++LDEADRM DMGFEPQ+ ++ N+ PD+ QT+LFSATMP ++AL ++ L +PV+++
Sbjct: 530 TYIVLDEADRMFDMGFEPQVMKIFANVRPDR-QTVLFSATMPKIMDALVKKVLKNPVEIE 588
Query: 330 VGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDE 389
VG S + + QI+E E K +R +++FVER+ + DE
Sbjct: 589 VGGKSVVASEITQIVEIRDEKSKFNRLLELLGELYKDDDDV-----RSLIFVERQEKADE 643
Query: 390 VSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNL 449
+ L+ +G ++LHGG++Q DR+S + DF++G +++AT VA+RGLDV + VVN
Sbjct: 644 LLRELLRKGYGCMSLHGGKDQVDRDSTISDFKSGVCPVMIATSVAARGLDVKQLKLVVNY 703
Query: 450 DLPKVL 455
D P L
Sbjct: 704 DAPNHL 709
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 672 (241.6 bits), Expect = 1.6e-65, P = 1.6e-65
Identities = 148/361 (40%), Positives = 221/361 (61%)
Query: 97 EEVRL-RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVA 155
EEV + RL ++ G P PI+++ + I+ ++ H Y +PT IQ+QA+P
Sbjct: 347 EEVNVYRLEMEGITVKGK-GCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQSQAIPAI 405
Query: 156 LSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVK 215
++GRDL+G A+TGSGKT AF +PM +H + Q + G+GP+A+++ PTRELA QI KE K
Sbjct: 406 MNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECK 465
Query: 216 ALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGN---TSLSRVSF 272
S++L + V GGT I+EQ +EL+ G I+V TPGR +D L N T+L RV++
Sbjct: 466 KFSKTL-GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTY 524
Query: 273 VILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVG 331
V+LDEADRM DMGFEPQ+ ++ N+ PD+ QT++FSAT P +EALA+ L+ P++V+VG
Sbjct: 525 VVLDEADRMFDMGFEPQVMRIVDNVRPDR-QTVMFSATFPRAMEALARRILSKPIEVQVG 583
Query: 332 KVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVS 391
S ++V Q + + E K + I+FV+++ D +
Sbjct: 584 GRSVVCSDVEQHVIVIEEENKFLKLLELLGHYQEKGS--------VIIFVDKQEHADGLL 635
Query: 392 EALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDL 451
+ L+ ++LHGG +Q DR+S + DF+NG+ +LVAT VA+RGLDV + VVN
Sbjct: 636 KDLMRASYPCLSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKQLMLVVNYSC 695
Query: 452 P 452
P
Sbjct: 696 P 696
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 148/383 (38%), Positives = 220/383 (57%)
Query: 74 VPQPVF--NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPS 131
+ P F N + + + P+Q+ E+R +LN+ V SG+ P P P SF
Sbjct: 203 IEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRV---SGAAP-PRPGSSFAHFGFDEQ 258
Query: 132 IMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGR 191
+M I EYT+PT IQ Q +PVA+SGRD++G A+TGSGKTAAF PM+ H + Q +
Sbjct: 259 LMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 318
Query: 192 GDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVA 251
GDGP+A+++ PTREL QQI E K ++ + ++ V GG ++ EQ L+ G IVV
Sbjct: 319 GDGPIAVIVCPTRELCQQIHSECKRFGKAYN-LRSVAVYGGGSMWEQAKALQEGAEIVVC 377
Query: 252 TPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATM 310
TPGR +DH+++ T+L RV++++ DEADRM DMGFE Q+R + ++ PD+ QTLLFSAT
Sbjct: 378 TPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDR-QTLLFSATF 436
Query: 311 PVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKS 370
+IE LA++ L DP++V G + +V QI+E
Sbjct: 437 RKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGS- 495
Query: 371 CHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVA 430
++FV +K +E++ L E + LHG +QS+R + +F+ ILVA
Sbjct: 496 ------VLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVA 549
Query: 431 TDVASRGLDVMGVAHVVNLDLPK 453
TDVA+RGLD+ + V+N D+ +
Sbjct: 550 TDVAARGLDIPSIKTVINYDVAR 572
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 664 (238.8 bits), Expect = 4.3e-65, P = 4.3e-65
Identities = 148/383 (38%), Positives = 220/383 (57%)
Query: 74 VPQPVF--NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPS 131
+ P F N + + + P+Q+ E+R +LN+ V SG+ P P P SF
Sbjct: 210 IEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRV---SGAAP-PRPGSSFAHFGFDEQ 265
Query: 132 IMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGR 191
+M I EYT+PT IQ Q +PVA+SGRD++G A+TGSGKTAAF PM+ H + Q +
Sbjct: 266 LMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 325
Query: 192 GDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVA 251
GDGP+A+++ PTREL QQI E K ++ + ++ V GG ++ EQ L+ G IVV
Sbjct: 326 GDGPIAVIVCPTRELCQQIHSECKRFGKAYN-LRSVAVYGGGSMWEQAKALQEGAEIVVC 384
Query: 252 TPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATM 310
TPGR +DH+++ T+L RV++++ DEADRM DMGFE Q+R + ++ PD+ QTLLFSAT
Sbjct: 385 TPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDR-QTLLFSATF 443
Query: 311 PVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKS 370
+IE LA++ L DP++V G + +V QI+E
Sbjct: 444 RKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGS- 502
Query: 371 CHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVA 430
++FV +K +E++ L E + LHG +QS+R + +F+ ILVA
Sbjct: 503 ------VLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVA 556
Query: 431 TDVASRGLDVMGVAHVVNLDLPK 453
TDVA+RGLD+ + V+N D+ +
Sbjct: 557 TDVAARGLDIPSIKTVINYDVAR 579
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 153/365 (41%), Positives = 216/365 (59%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P IESF+D+ + IM +IE YTRPT +Q A+P+ RDL+ CA
Sbjct: 207 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 266
Query: 166 ETGSGKTAAFTIPMIQHCVAQTP------------VGRGDG-PLALVLAPTRELAQQIEK 212
+TGSGKTAAF +P++ + P GR P++LVLAPTRELA QI +
Sbjct: 267 QTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 326
Query: 213 EVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVS 271
E + S RS + +V GG +I +Q +L G ++VATPGR +D +++G L
Sbjct: 327 EARKFSYRS--RVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCK 384
Query: 272 FVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLTDPVQ 327
+++LDEADRMLDMGFEPQIR +++ +P K T++FSAT P EI+ LA+++L + +
Sbjct: 385 YLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIF 444
Query: 328 VKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRC 387
+ VG+V S + N+ Q + V E++K R K LT+VFVE K
Sbjct: 445 LAVGRVGSTSENITQKVVWVEESDK--RSFLLDLLNATESGKDS----LTLVFVETKKGA 498
Query: 388 DEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVV 447
D + + L EG ++HG R+Q DRE AL FR+G + ILVAT VA+RGLD+ V HV+
Sbjct: 499 DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVI 558
Query: 448 NLDLP 452
N DLP
Sbjct: 559 NFDLP 563
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 663 (238.4 bits), Expect = 5.5e-65, P = 5.5e-65
Identities = 148/383 (38%), Positives = 220/383 (57%)
Query: 74 VPQPVF--NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPS 131
+ P F N + + + P+Q+ E+R +LN+ V SG+ P P P SF
Sbjct: 208 IEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRV---SGAAP-PRPGSSFARFGFDEQ 263
Query: 132 IMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGR 191
+M I EYT+PT IQ Q +PVA+SGRD++G A+TGSGKTAAF PM+ H + Q +
Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323
Query: 192 GDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVA 251
GDGP+A+++ PTREL QQI E K ++ + ++ V GG ++ EQ L+ G IVV
Sbjct: 324 GDGPIAVIVCPTRELCQQIHSECKRFGKAYN-LRSVAVYGGGSMWEQAKALQEGAEIVVC 382
Query: 252 TPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATM 310
TPGR +DH+++ T+L RV++++ DEADRM DMGFE Q+R + ++ PD+ QTLLFSAT
Sbjct: 383 TPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDR-QTLLFSATF 441
Query: 311 PVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKS 370
+IE LA++ L DP++V G + +V QI+E
Sbjct: 442 RKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGS- 500
Query: 371 CHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVA 430
++FV +K +E++ L E + LHG +QS+R + +F+ ILVA
Sbjct: 501 ------VLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVA 554
Query: 431 TDVASRGLDVMGVAHVVNLDLPK 453
TDVA+RGLD+ + V+N D+ +
Sbjct: 555 TDVAARGLDIPSIKTVINYDVAR 577
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 154/365 (42%), Positives = 215/365 (58%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P IESF+D+ + IM +IE YTRPT +Q A+P+ RDL+ CA
Sbjct: 165 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 224
Query: 166 ETGSGKTAAFTIPMIQHCVAQTP------------VGRGDG-PLALVLAPTRELAQQIEK 212
+TGSGKTAAF +P++ A P GR P++LVLAPTRELA QI +
Sbjct: 225 QTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 213 EVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVS 271
E + S RS + +V GG I +Q +L G ++VATPGR +D +++G L
Sbjct: 285 EARKFSYRS--RVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCK 342
Query: 272 FVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLTDPVQ 327
+++LDEADRMLDMGFEPQIR +++ +P K T++FSAT P EI+ LA+++L + +
Sbjct: 343 YLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIF 402
Query: 328 VKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRC 387
+ VG+V S + N+ Q KV E++D+ S LT+VFVE K
Sbjct: 403 LAVGRVGSTSENITQ---KVVWVEEIDKRSFLLDLLNATGKDS-----LTLVFVETKKGA 454
Query: 388 DEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVV 447
D + + L EG ++HG R+Q DRE AL FR+G + ILVAT VA+RGLD+ V HV+
Sbjct: 455 DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVI 514
Query: 448 NLDLP 452
N DLP
Sbjct: 515 NFDLP 519
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 154/365 (42%), Positives = 215/365 (58%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P IESF+D+ + IM +IE YTRPT +Q A+P+ RDL+ CA
Sbjct: 165 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 224
Query: 166 ETGSGKTAAFTIPMIQHCVAQTP------------VGRGDG-PLALVLAPTRELAQQIEK 212
+TGSGKTAAF +P++ A P GR P++LVLAPTRELA QI +
Sbjct: 225 QTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 213 EVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVS 271
E + S RS + +V GG I +Q +L G ++VATPGR +D +++G L
Sbjct: 285 EARKFSYRS--RVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCK 342
Query: 272 FVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLTDPVQ 327
+++LDEADRMLDMGFEPQIR +++ +P K T++FSAT P EI+ LA+++L + +
Sbjct: 343 YLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIF 402
Query: 328 VKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRC 387
+ VG+V S + N+ Q KV E++D+ S LT+VFVE K
Sbjct: 403 LAVGRVGSTSENITQ---KVVWVEEIDKRSFLLDLLNATGKDS-----LTLVFVETKKGA 454
Query: 388 DEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVV 447
D + + L EG ++HG R+Q DRE AL FR+G + ILVAT VA+RGLD+ V HV+
Sbjct: 455 DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVI 514
Query: 448 NLDLP 452
N DLP
Sbjct: 515 NFDLP 519
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 146/385 (37%), Positives = 226/385 (58%)
Query: 77 PVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDI 136
P+ +W+ +L + + VR + ++ V G P PI+SF +M +I++ +
Sbjct: 137 PIKTSWRAPRYILAMSEARHNRVRKKYHILVE-GEG---IPPPIKSFKEMKFPAAILRGL 192
Query: 137 EFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT---PVGRGD 193
+ +PT IQ Q +P LSGRD++G A TGSGKT FT+P+I C+ Q P + +
Sbjct: 193 KKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE 252
Query: 194 GPLALVLAPTRELAQQ----IEKEVKALSR-SLDSFKTAIVVGGTNIAEQRSELRGGVSI 248
GP L++ P+RELA+Q IE + L SL + A+ +GG ++ EQ ++ GV +
Sbjct: 253 GPYGLIICPSRELARQTHGIIEYYCRLLQEDSLPPLRCALCIGGMSVKEQMETIKHGVHM 312
Query: 249 VVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSA 308
+VATPGR +D LQ+ SL ++ LDEADRM+DMGFE IR + + QTLLFSA
Sbjct: 313 MVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSA 372
Query: 309 TMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXX 368
TMP +I+ A+ L P+ + VG+ + + +V+Q +E V E K+
Sbjct: 373 TMPKKIQNFAKSALVKPITINVGRAGAASLDVVQEVEYVKEEAKM-------VYLLECLQ 425
Query: 369 KSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNIL 428
K+ P P+ ++F E+K D + E L+ +G+ AVA+HGG++Q +R A+ FR+G ++L
Sbjct: 426 KT--PPPV-LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDVL 482
Query: 429 VATDVASRGLDVMGVAHVVNLDLPK 453
VATDVAS+GLD + HV+N D+P+
Sbjct: 483 VATDVASKGLDFPAIQHVINYDMPE 507
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 156/366 (42%), Positives = 219/366 (59%)
Query: 106 DVTV-ASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGC 164
D+ V A+GS P IESF+D+ + IM +IE YTRPT +Q A+P+ RDL+ C
Sbjct: 143 DIPVEATGS-NCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 201
Query: 165 AETGSGKTAAFTIPMIQHCVAQTP------------VGRGDG-PLALVLAPTRELAQQIE 211
A+TGSGKTAAF +P++ A P GR P++LVLAPTRELA QI
Sbjct: 202 AQTGSGKTAAFLLPILSQIYADGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 261
Query: 212 KEVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRV 270
+E + + RS + +V GG +I +Q +L G ++VATPGR +D +++G L
Sbjct: 262 EEARKFAYRS--RVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC 319
Query: 271 SFVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLTDPV 326
+++LDEADRMLDMGFEPQIR +++ +P K T++FSAT P EI+ LA+++L + +
Sbjct: 320 KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYI 379
Query: 327 QVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTR 386
+ VG+V S + N+ Q KV E++D+ S LT+VFVE K
Sbjct: 380 FLAVGRVGSTSENITQ---KVVWVEELDKRSFLLDLLNATGKDS-----LTLVFVETKKG 431
Query: 387 CDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHV 446
D + + L EG ++HG R+Q DRE AL FR+G + ILVAT VA+RGLD+ V HV
Sbjct: 432 ADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHV 491
Query: 447 VNLDLP 452
+N DLP
Sbjct: 492 INFDLP 497
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 143/385 (37%), Positives = 224/385 (58%)
Query: 76 QPVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKD 135
+P+ WKP + + + +Q + +R + ++ + +G P PI++F DM ++
Sbjct: 105 EPLLTGWKPPLHIRKMSSKQRDLIRKQWHI---IVNGD-DIPPPIKNFKDMKFPRPVLDT 160
Query: 136 IEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT---PVGRG 192
++ +PT IQ Q +PV L+GRD++G A TGSGKT F +PMI + + P+ G
Sbjct: 161 LKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAG 220
Query: 193 DGPLALVLAPTRELAQQ----IEKEVKALSRS-LDSFKTAIVVGGTNIAEQRSELRGGVS 247
+GP+ L++ P+RELA+Q +E+ V L + ++ + +GG ++ Q ++ GV
Sbjct: 221 EGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVH 280
Query: 248 IVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFS 307
IVVATPGR D L + SL ++ LDEADR++D+GFE IREV + + QTLLFS
Sbjct: 281 IVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFS 340
Query: 308 ATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXX 367
ATMP +I+ A+ L PV V VG+ + +VIQ +E V + K+
Sbjct: 341 ATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKI-------VYLLECL 393
Query: 368 XKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNI 427
K+ P ++F E K D++ E L+ +G+ AVA+HGG++Q DRE A+ F+ G ++
Sbjct: 394 QKTSPP---VLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDV 450
Query: 428 LVATDVASRGLDVMGVAHVVNLDLP 452
LVATDVAS+GLD + HV+N D+P
Sbjct: 451 LVATDVASKGLDFPDIQHVINYDMP 475
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 157/386 (40%), Positives = 225/386 (58%)
Query: 80 NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVA------SG--SVPAPAPIESFTDMCL--H 129
N +K + V +IE +R N +TV+ G S P P P+ +F + C +
Sbjct: 234 NFYKEAPEVANLTKSEIERIREENN-KITVSYVFEPKEGETSPPIPNPVWTF-EQCFAEY 291
Query: 130 PSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQ-TP 188
P ++++I +++P+ IQ+QA P+ L G D++G A+TG+GKT AF +P + H Q TP
Sbjct: 292 PDMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTP 351
Query: 189 VGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSI 248
G G LVLAPTRELA QIE EVK S K V GG N Q S+L G I
Sbjct: 352 RGTRGGANVLVLAPTRELALQIEMEVKKYS--FRGMKAVCVYGGGNRNMQISDLERGAEI 409
Query: 249 VVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFS 307
++ TPGR D + +S +++++LDEADRMLDMGFEPQIR+VM ++ PD+ QT++ S
Sbjct: 410 IICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDR-QTIMTS 468
Query: 308 ATMPVEIEALAQEYLTDPVQVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXX 366
AT P + LAQ Y+ +P+QV VG + + T +V QI+ K+ E++ +D+
Sbjct: 469 ATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQII-KLMEDD-MDKFNTITSFV--- 523
Query: 367 XXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTN 426
K+ I+F RK R D++S L +G +HG R+Q DRE A+ D ++G
Sbjct: 524 --KNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVR 581
Query: 427 ILVATDVASRGLDVMGVAHVVNLDLP 452
ILVATDVASRGLD+ + HV+N D P
Sbjct: 582 ILVATDVASRGLDIEDITHVINYDFP 607
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 156/367 (42%), Positives = 219/367 (59%)
Query: 106 DVTV-ASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGC 164
D+ V A+GS P IESF+D+ + IM +IE YTRPT +Q A+P+ RDL+ C
Sbjct: 141 DIPVEATGS-NCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 199
Query: 165 AETGSGKTAAFTIPMIQHCVAQTP-------------VGRGDG-PLALVLAPTRELAQQI 210
A+TGSGKTAAF +P++ A P GR P++LVLAPTRELA QI
Sbjct: 200 AQTGSGKTAAFLLPILSQIYADGPGDALRAMKATNGRYGRRKQYPISLVLAPTRELAVQI 259
Query: 211 EKEVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSR 269
+E + + RS + +V GG +I +Q +L G ++VATPGR +D +++G L
Sbjct: 260 YEEARKFAYRS--RVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDF 317
Query: 270 VSFVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLTDP 325
+++LDEADRMLDMGFEPQIR +++ +P K T++FSAT P EI+ LA+++L +
Sbjct: 318 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 377
Query: 326 VQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKT 385
+ + VG+V S + N+ Q KV E++D+ S LT+VFVE K
Sbjct: 378 IFLAVGRVGSTSENITQ---KVVWVEELDKRSFLLDLLNATGKDS-----LTLVFVETKK 429
Query: 386 RCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAH 445
D + + L EG ++HG R+Q DRE AL FR+G + ILVAT VA+RGLD+ V H
Sbjct: 430 GADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKH 489
Query: 446 VVNLDLP 452
V+N DLP
Sbjct: 490 VINFDLP 496
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 155/369 (42%), Positives = 213/369 (57%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P PI+ F D+ + IM +I YTRPT +Q A+P+ S RDL+ CA
Sbjct: 193 DIPVEATGHNGPQPIDRFHDLEMGEIIMGNINLSRYTRPTPVQKHAIPIIKSKRDLMACA 252
Query: 166 ETGSGKTAAFTIPMIQHCVAQTP----------------VGRGDG-PLALVLAPTRELAQ 208
+TGSGKTAAF +P++ P GR P++LVLAPTRELA
Sbjct: 253 QTGSGKTAAFLLPVLSQIYTDGPGEALQAAKNSAQENGKYGRRKQYPISLVLAPTRELAL 312
Query: 209 QIEKEVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSL 267
QI E + S RS + +V GG +I +Q +L G ++VATPGR LD +++G L
Sbjct: 313 QIYDEARKFSYRS--HVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLLDMMERGKIGL 370
Query: 268 SRVSFVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLT 323
++++LDEADRMLDMGFEPQIR +++ +P K QT++FSAT P EI+ LA+++L
Sbjct: 371 DYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRQTMMFSATFPKEIQILARDFLE 430
Query: 324 DPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVER 383
D + + VG+V S + N+ Q + V EN+K R LT+VFVE
Sbjct: 431 DYIFLAVGRVGSTSENITQKVVWVEENDK--RSFLLDLLNATGKDS------LTLVFVET 482
Query: 384 KTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGV 443
K D + + L EG ++HG R+Q DRE AL FR+G ILVAT VA+RGLD+ V
Sbjct: 483 KKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARGLDISNV 542
Query: 444 AHVVNLDLP 452
HV+N DLP
Sbjct: 543 KHVINFDLP 551
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 144/376 (38%), Positives = 224/376 (59%)
Query: 80 NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFH 139
N +K + + + + ++++E+R + + T+ G P P+ S + ++K ++ +
Sbjct: 75 NFYKEHEDISKLSTKEVKEIRDKHKI--TILEGE-NVPKPVVSINKIGFPDYVIKSLKNN 131
Query: 140 EYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALV 199
PT IQ Q P+ALSG+D++G AETGSGKT AF +P H +AQ + GDGP+ LV
Sbjct: 132 NIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLV 191
Query: 200 LAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDH 259
LAPTRELA+QI +E S + GG + Q L+ GV I++A PGR +D
Sbjct: 192 LAPTRELAEQIRQECIKFSTE-SKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLIDL 250
Query: 260 LQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALA 318
L+Q T+L RV++++LDEAD+MLDMGFE QIR+++ + PD+ QTL++SAT P E++ALA
Sbjct: 251 LEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQIRPDR-QTLMWSATWPKEVQALA 309
Query: 319 QEYLTD-PVQVKVGKVSSPTANVI-QILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPL 376
++ + P+QV VG ++ I Q + + E+EK+ +
Sbjct: 310 KDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNLKSLLQRIFKDNDR------- 362
Query: 377 TIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASR 436
IVFVE K D +++AL +G+ A+ +HG + Q +R L +F+ G + I++ATDVASR
Sbjct: 363 IIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATDVASR 422
Query: 437 GLDVMGVAHVVNLDLP 452
GLD+ V +V+N D P
Sbjct: 423 GLDIKNVKYVINFDFP 438
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 144/376 (38%), Positives = 224/376 (59%)
Query: 80 NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFH 139
N +K + + + + ++++E+R + + T+ G P P+ S + ++K ++ +
Sbjct: 75 NFYKEHEDISKLSTKEVKEIRDKHKI--TILEGE-NVPKPVVSINKIGFPDYVIKSLKNN 131
Query: 140 EYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALV 199
PT IQ Q P+ALSG+D++G AETGSGKT AF +P H +AQ + GDGP+ LV
Sbjct: 132 NIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLV 191
Query: 200 LAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDH 259
LAPTRELA+QI +E S + GG + Q L+ GV I++A PGR +D
Sbjct: 192 LAPTRELAEQIRQECIKFSTE-SKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLIDL 250
Query: 260 LQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALA 318
L+Q T+L RV++++LDEAD+MLDMGFE QIR+++ + PD+ QTL++SAT P E++ALA
Sbjct: 251 LEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQIRPDR-QTLMWSATWPKEVQALA 309
Query: 319 QEYLTD-PVQVKVGKVSSPTANVI-QILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPL 376
++ + P+QV VG ++ I Q + + E+EK+ +
Sbjct: 310 KDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNLKSLLQRIFKDNDR------- 362
Query: 377 TIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASR 436
IVFVE K D +++AL +G+ A+ +HG + Q +R L +F+ G + I++ATDVASR
Sbjct: 363 IIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATDVASR 422
Query: 437 GLDVMGVAHVVNLDLP 452
GLD+ V +V+N D P
Sbjct: 423 GLDIKNVKYVINFDFP 438
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 155/366 (42%), Positives = 217/366 (59%)
Query: 106 DVTV-ASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGC 164
D+ V A+GS P IE+F+D+ + IM +IE YTRPT +Q A+P+ RDL+ C
Sbjct: 160 DIPVEATGS-NCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMAC 218
Query: 165 AETGSGKTAAFTIPMIQHCVAQTP------------VGRGDG-PLALVLAPTRELAQQIE 211
A+TGSGKTAAF +P++ P GR P++LVLAPTRELA QI
Sbjct: 219 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIY 278
Query: 212 KEVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRV 270
+E + S RS + +V GG +I +Q +L G ++VATPGR +D +++G L
Sbjct: 279 EEARKFSYRS--RVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC 336
Query: 271 SFVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLTDPV 326
+++LDEADRMLDMGFEPQIR +++ +P K T++FSAT P EI+ LA+++L + +
Sbjct: 337 KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYI 396
Query: 327 QVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTR 386
+ VG+V S + N+ Q KV E +D+ S LT+VFVE K
Sbjct: 397 FLAVGRVGSTSENITQ---KVVWVEDLDKRSFLLDILGATGSDS-----LTLVFVETKKG 448
Query: 387 CDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHV 446
D + + L EG ++HG R+Q DRE AL FR+G + ILVAT VA+RGLD+ V HV
Sbjct: 449 ADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHV 508
Query: 447 VNLDLP 452
+N DLP
Sbjct: 509 INFDLP 514
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 155/366 (42%), Positives = 217/366 (59%)
Query: 106 DVTV-ASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGC 164
D+ V A+GS P IE+F+D+ + IM +IE YTRPT +Q A+P+ RDL+ C
Sbjct: 163 DIPVEATGS-NCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMAC 221
Query: 165 AETGSGKTAAFTIPMIQHCVAQTP------------VGRGDG-PLALVLAPTRELAQQIE 211
A+TGSGKTAAF +P++ P GR P++LVLAPTRELA QI
Sbjct: 222 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIY 281
Query: 212 KEVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRV 270
+E + S RS + +V GG +I +Q +L G ++VATPGR +D +++G L
Sbjct: 282 EEARKFSYRS--RVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC 339
Query: 271 SFVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLTDPV 326
+++LDEADRMLDMGFEPQIR +++ +P K T++FSAT P EI+ LA+++L + +
Sbjct: 340 KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYI 399
Query: 327 QVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTR 386
+ VG+V S + N+ Q KV E +D+ S LT+VFVE K
Sbjct: 400 FLAVGRVGSTSENITQ---KVVWVEDLDKRSFLLDILGATGSDS-----LTLVFVETKKG 451
Query: 387 CDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHV 446
D + + L EG ++HG R+Q DRE AL FR+G + ILVAT VA+RGLD+ V HV
Sbjct: 452 ADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHV 511
Query: 447 VNLDLP 452
+N DLP
Sbjct: 512 INFDLP 517
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 153/365 (41%), Positives = 215/365 (58%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P IESF+D+ + IM +IE YTRPT +Q A+P+ RDL+ CA
Sbjct: 164 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 223
Query: 166 ETGSGKTAAFTIPMIQHCVAQTP------------VGRGDG-PLALVLAPTRELAQQIEK 212
+TGSGKTAAF +P++ + P GR P++LVLAPTRELA QI +
Sbjct: 224 QTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 283
Query: 213 EVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVS 271
E + S RS + +V GG +I +Q +L G ++VATPGR +D +++G L
Sbjct: 284 EARKFSYRS--RVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCK 341
Query: 272 FVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLTDPVQ 327
+++LDEADRMLDMGFEPQIR +++ +P K T++FSAT P EI+ LA+++L + +
Sbjct: 342 YLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIF 401
Query: 328 VKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRC 387
+ VG+V S + N+ Q KV E+ D+ S LT+VFVE K
Sbjct: 402 LAVGRVGSTSENITQ---KVVWVEESDKRSFLLDLLNATGKDS-----LTLVFVETKKGA 453
Query: 388 DEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVV 447
D + + L EG ++HG R+Q DRE AL FR+G + ILVAT VA+RGLD+ V HV+
Sbjct: 454 DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVI 513
Query: 448 NLDLP 452
N DLP
Sbjct: 514 NFDLP 518
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 153/365 (41%), Positives = 215/365 (58%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P IESF+D+ + IM +IE YTRPT +Q A+P+ RDL+ CA
Sbjct: 165 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 224
Query: 166 ETGSGKTAAFTIPMIQHCVAQTP------------VGRGDG-PLALVLAPTRELAQQIEK 212
+TGSGKTAAF +P++ + P GR P++LVLAPTRELA QI +
Sbjct: 225 QTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 213 EVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVS 271
E + S RS + +V GG +I +Q +L G ++VATPGR +D +++G L
Sbjct: 285 EARKFSYRS--RVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCK 342
Query: 272 FVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLTDPVQ 327
+++LDEADRMLDMGFEPQIR +++ +P K T++FSAT P EI+ LA+++L + +
Sbjct: 343 YLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIF 402
Query: 328 VKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRC 387
+ VG+V S + N+ Q KV E+ D+ S LT+VFVE K
Sbjct: 403 LAVGRVGSTSENITQ---KVVWVEESDKRSFLLDLLNATGKDS-----LTLVFVETKKGA 454
Query: 388 DEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVV 447
D + + L EG ++HG R+Q DRE AL FR+G + ILVAT VA+RGLD+ V HV+
Sbjct: 455 DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVI 514
Query: 448 NLDLP 452
N DLP
Sbjct: 515 NFDLP 519
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 153/365 (41%), Positives = 215/365 (58%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P IESF+D+ + IM +IE YTRPT +Q A+P+ RDL+ CA
Sbjct: 165 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 224
Query: 166 ETGSGKTAAFTIPMIQHCVAQTP------------VGRGDG-PLALVLAPTRELAQQIEK 212
+TGSGKTAAF +P++ + P GR P++LVLAPTRELA QI +
Sbjct: 225 QTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 213 EVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVS 271
E + S RS + +V GG +I +Q +L G ++VATPGR +D +++G L
Sbjct: 285 EARKFSYRS--RVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCK 342
Query: 272 FVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLTDPVQ 327
+++LDEADRMLDMGFEPQIR +++ +P K T++FSAT P EI+ LA+++L + +
Sbjct: 343 YLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIF 402
Query: 328 VKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRC 387
+ VG+V S + N+ Q KV E+ D+ S LT+VFVE K
Sbjct: 403 LAVGRVGSTSENITQ---KVVWVEESDKRSFLLDLLNATGKDS-----LTLVFVETKKGA 454
Query: 388 DEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVV 447
D + + L EG ++HG R+Q DRE AL FR+G + ILVAT VA+RGLD+ V HV+
Sbjct: 455 DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVI 514
Query: 448 NLDLP 452
N DLP
Sbjct: 515 NFDLP 519
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 153/365 (41%), Positives = 215/365 (58%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P IESF+D+ + IM +IE YTRPT +Q A+P+ RDL+ CA
Sbjct: 165 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 224
Query: 166 ETGSGKTAAFTIPMIQHCVAQTP------------VGRGDG-PLALVLAPTRELAQQIEK 212
+TGSGKTAAF +P++ + P GR P++LVLAPTRELA QI +
Sbjct: 225 QTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 213 EVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVS 271
E + S RS + +V GG +I +Q +L G ++VATPGR +D +++G L
Sbjct: 285 EARKFSYRS--RVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCK 342
Query: 272 FVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLTDPVQ 327
+++LDEADRMLDMGFEPQIR +++ +P K T++FSAT P EI+ LA+++L + +
Sbjct: 343 YLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIF 402
Query: 328 VKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRC 387
+ VG+V S + N+ Q KV E+ D+ S LT+VFVE K
Sbjct: 403 LAVGRVGSTSENITQ---KVVWVEESDKRSFLLDLLNATGKDS-----LTLVFVETKKGA 454
Query: 388 DEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVV 447
D + + L EG ++HG R+Q DRE AL FR+G + ILVAT VA+RGLD+ V HV+
Sbjct: 455 DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVI 514
Query: 448 NLDLP 452
N DLP
Sbjct: 515 NFDLP 519
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 154/365 (42%), Positives = 213/365 (58%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V P IESF+D+ + IM +IE YTRPT +Q A+P+ RDL+ CA
Sbjct: 165 DIPVEVTGNNCPPHIESFSDVAMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 224
Query: 166 ETGSGKTAAFTIPMIQHCVAQTP---------VGR-G---DGPLALVLAPTRELAQQIEK 212
+TGSGKTAAF +P++ P GR G P++LVLAPTRELA QI +
Sbjct: 225 QTGSGKTAAFLLPILSQIYTDGPGEALKAVKESGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 213 EVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVS 271
E + S RS +V GG +I +Q +L G ++VATPGR +D +++G L
Sbjct: 285 EARKFSYRS--RVLPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCK 342
Query: 272 FVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLTDPVQ 327
+++LDEADRMLDMGFEPQIR +++ +P K T++FSAT P EI+ LA+++L + +
Sbjct: 343 YLVLDEADRMLDMGFEPQIRRIIEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIF 402
Query: 328 VKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRC 387
+ VG+V S + N+ Q KV E+ D+ S LT+VFVE K
Sbjct: 403 LAVGRVGSTSENITQ---KVVWVEEADKRSFLLDLLNATGTDS-----LTLVFVETKKGA 454
Query: 388 DEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVV 447
D + + L EG ++HG R+Q DRE AL FR+G + ILVAT VA+RGLD+ V HV+
Sbjct: 455 DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVI 514
Query: 448 NLDLP 452
N DLP
Sbjct: 515 NFDLP 519
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 153/365 (41%), Positives = 214/365 (58%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P IESF+D+ + IM +IE YTRPT +Q A+P+ RDL+ CA
Sbjct: 166 DIPVEATGNNCPRHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 225
Query: 166 ETGSGKTAAFTIPMIQHCVAQTP------------VGRGDG-PLALVLAPTRELAQQIEK 212
+TGSGKTAAF +P++ P GR P++LVLAPTRELA QI +
Sbjct: 226 QTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYE 285
Query: 213 EVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVS 271
E + S RS + +V GG +I +Q +L G ++VATPGR +D +++G L
Sbjct: 286 EARKFSYRS--RVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCK 343
Query: 272 FVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLTDPVQ 327
+++LDEADRMLDMGFEPQIR +++ +P K T++FSAT P EI+ LA+++L + +
Sbjct: 344 YLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIF 403
Query: 328 VKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRC 387
+ VG+V S + N+ Q KV E+ D+ S LT+VFVE K
Sbjct: 404 LAVGRVGSTSENITQ---KVVWVEESDKRSFLLDLLNATGKDS-----LTLVFVETKKGA 455
Query: 388 DEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVV 447
D + + L EG ++HG R+Q DRE AL FR+G + ILVAT VA+RGLD+ V HV+
Sbjct: 456 DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVI 515
Query: 448 NLDLP 452
N DLP
Sbjct: 516 NFDLP 520
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 145/362 (40%), Positives = 213/362 (58%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P PI FT L ++++I+ +T+PT +Q ++P+ +GRDL+ CA
Sbjct: 127 DIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACA 186
Query: 166 ETGSGKTAAFTIPMIQHC--VAQTPVGRGDG--------PLALVLAPTRELAQQIEKEVK 215
+TGSGKT F P++ +P G P A+++APTRELA QI E K
Sbjct: 187 QTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAK 246
Query: 216 ALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVI 274
+ RS K +V GG+ I Q E+ G ++VATPGR D L++G SL+ V +++
Sbjct: 247 KFTYRSW--VKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLV 304
Query: 275 LDEADRMLDMGFEPQIREVMQNL---P-DKHQTLLFSATMPVEIEALAQEYLTDPVQVKV 330
LDEADRMLDMGFEPQIR ++++ P + QTL+FSAT P +I+ LA+++L+D + + V
Sbjct: 305 LDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSDYIFLSV 364
Query: 331 GKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEV 390
G+V S + N+ Q KV E D+ LT++FVE K D++
Sbjct: 365 GRVGSTSENITQ---KVLYVENQDKKSALLDLLSASTDG------LTLIFVETKRMADQL 415
Query: 391 SEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLD 450
++ L+ + A A+HG R QS+RE AL FR+G+ +LVAT VA+RGLD+ V HV+N D
Sbjct: 416 TDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHVINYD 475
Query: 451 LP 452
LP
Sbjct: 476 LP 477
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 138/338 (40%), Positives = 208/338 (61%)
Query: 117 PAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFT 176
P P+ F + L P + ++ + ++ +PT IQ+ + P+A+SGRD++ A+TGSGKT AF
Sbjct: 126 PRPVFEFNEAPL-PGQIHELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFM 184
Query: 177 IPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIA 236
+P + H Q RG+GP LVL PTRELAQQ+++ SL K + GG +
Sbjct: 185 LPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSL-GLKMTCLFGGASKG 243
Query: 237 EQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQN 296
Q +L GV IVVATPGR LD L G T++ + S+++LDEADRMLDMGFEPQI++++
Sbjct: 244 PQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQ 303
Query: 297 L-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVS-SPTANVIQILEKVSENEKVD 354
+ PD+ QTL+FSAT P E+ ALA ++ D + VG + + N+ Q+++ + E+ K
Sbjct: 304 IRPDR-QTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAK-- 360
Query: 355 RXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRE 414
+ K C TI+FVE K + DE++ A+ +G + +HG +NQ +R+
Sbjct: 361 QAKLMELLNHIMNQKECK----TIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERD 416
Query: 415 SALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
L++F+ G T I++ATDVA+RGLDV + V+N D P
Sbjct: 417 WVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYP 454
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 148/362 (40%), Positives = 215/362 (59%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P PI SFT L ++++I+ +T+PT +Q ++P+ +GRDL+ CA
Sbjct: 171 DIPVEASGDKVPEPITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLMACA 230
Query: 166 ETGSGKTAAFTIPMIQHCVAQ--TPVGRGDG--------PLALVLAPTRELAQQIEKEVK 215
+TGSGKT F P++ + PV +G P LV+APTREL QI +E K
Sbjct: 231 QTGSGKTGGFLFPVLSESYMKGPAPVPESNGAFSSHKVYPTILVMAPTRELVSQIYEESK 290
Query: 216 ALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVI 274
S RS + +V GG +I +Q + G ++VATPGR D L +G SL+ + +++
Sbjct: 291 KFSYRSW--VRACVVYGGADIGQQMRNMDRGCDLLVATPGRLKDLLDRGKVSLANIRYLV 348
Query: 275 LDEADRMLDMGFEPQIREVMQ--NLP--DKHQTLLFSATMPVEIEALAQEYLTDPVQVKV 330
LDEADRMLDMGFEPQIR +++ ++P QTL+FSAT P +I+ LA+++L D V + V
Sbjct: 349 LDEADRMLDMGFEPQIRYIVEECDMPAVKDRQTLMFSATFPRDIQMLARDFLKDYVFLSV 408
Query: 331 GKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEV 390
G+V S + N+ Q + V ++EK S + LTIVF E K D +
Sbjct: 409 GRVGSTSENITQKILYVEDDEK---------KSVILDLLSANENGLTIVFTETKRMADNL 459
Query: 391 SEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLD 450
++ L +G A A+HG R+Q +RE AL F+NG+ ILVAT VA+RGLD+ V+HV+N D
Sbjct: 460 ADYLYDQGFPATAIHGDRSQYEREKALAAFKNGAAPILVATAVAARGLDIPNVSHVINYD 519
Query: 451 LP 452
LP
Sbjct: 520 LP 521
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 148/385 (38%), Positives = 224/385 (58%)
Query: 76 QPVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKD 135
+P+ WKP V + + +Q++ +R + ++ TV +P P PI++F DM +++
Sbjct: 56 EPLSTWWKPPLHVRKMSTKQMDLIRKQWHI--TVNGEDIP-P-PIKNFMDMKFPSPLLRM 111
Query: 136 IEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT---PVGRG 192
++ PT IQ Q +PV LSGRD++G A TGSGKT F +PMI + + P+ G
Sbjct: 112 LKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAG 171
Query: 193 DGPLALVLAPTRELAQQIEKEVKALSRSL--DSF---KTAIVVGGTNIAEQRSELRGGVS 247
+GP+ALV+ P+RELA+Q V+ SL D + ++ + +GG ++ Q ++ GV
Sbjct: 172 EGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVH 231
Query: 248 IVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFS 307
IVVATPGR D L + SL + LDEADR++D+GFE IR V + + QTLLFS
Sbjct: 232 IVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFS 291
Query: 308 ATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXX 367
ATMP +I+ A L PV V VG+ + +VIQ +E V + K+
Sbjct: 292 ATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKI-------VYLLECL 344
Query: 368 XKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNI 427
K+ P ++F E K D++ E L+ +G+ AVA+HGG++Q DR+ A+ F+ G ++
Sbjct: 345 QKTTPP---VLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDV 401
Query: 428 LVATDVASRGLDVMGVAHVVNLDLP 452
LVATDVAS+GLD + HV+N D+P
Sbjct: 402 LVATDVASKGLDFPDIQHVINYDMP 426
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 660 (237.4 bits), Expect = 7.1e-64, P = 7.1e-64
Identities = 150/377 (39%), Positives = 225/377 (59%)
Query: 83 KPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYT 142
+PSD + + + E E LRL +D G + P P++ ++ L + I+ +
Sbjct: 507 EPSD-LAQMSEE--EAANLRLELDGIKVRG-LDVPKPVQKWSQCGLGIQTLDVIDKLGFA 562
Query: 143 RPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAP 202
TSIQAQA+P +SGRD++G A+TGSGKT AF IPM +H Q P+ +GP+ L++ P
Sbjct: 563 SLTSIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLIPMFRHIKDQRPLENMEGPIGLIMTP 622
Query: 203 TRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHL-- 260
TRELA QI K+ K ++L+ + GG I +Q +EL+ G I+V TPGR +D L
Sbjct: 623 TRELATQIHKDCKPFLKALN-LRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAA 681
Query: 261 QQGN-TSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALA 318
G T+L RV++V+LDEADRM DMGFEPQ+ +++ N+ PD+ QT+LFSAT P +EALA
Sbjct: 682 NAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILSNVRPDR-QTVLFSATFPRNMEALA 740
Query: 319 QEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTI 378
++ LT P+++ VG S + QI+E +E +K R ++
Sbjct: 741 RKTLTKPIEIVVGGRSVVAPEITQIVEVCNEEKKFVRLLELLGNLYSTDENED---ARSL 797
Query: 379 VFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGL 438
+FV+R+ D + L+ +G +++HGG++Q DR+S + DF+ G +L+AT VA+RGL
Sbjct: 798 IFVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGL 857
Query: 439 DVMGVAHVVNLDLPKVL 455
DV + VVN D P L
Sbjct: 858 DVKQLKLVVNYDAPNHL 874
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 150/362 (41%), Positives = 209/362 (57%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P I SF D+ L I ++ Y +PT +Q A+P+ ++GRDL+ CA
Sbjct: 280 DIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACA 339
Query: 166 ETGSGKTAAFTIPMIQHC--VAQTPVG--------RGDGPLALVLAPTRELAQQIEKEVK 215
+TGSGKTAAF +P++ + P R PL LVLAPTRELA QI +E K
Sbjct: 340 QTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAK 399
Query: 216 ALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVI 274
+ RS + A++ GG N +EQ EL G ++VATPGR D + +G L + F++
Sbjct: 400 KFAYRS--RMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLV 457
Query: 275 LDEADRMLDMGFEPQIREVMQ--NLPD--KHQTLLFSATMPVEIEALAQEYLTDPVQVKV 330
LDEADRMLDMGFEPQIR +++ N+P + QTL+FSAT P +I+ LA ++L++ + + V
Sbjct: 458 LDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAV 517
Query: 331 GKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEV 390
G+V S + N+ Q + V E +K R LT++FVE K D +
Sbjct: 518 GRVGSTSENITQTILWVYEPDK--RSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSL 575
Query: 391 SEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLD 450
E L ++HG R Q +RE ALR FR+G ILVAT VA+RGLD+ V HV+N D
Sbjct: 576 EEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFD 635
Query: 451 LP 452
LP
Sbjct: 636 LP 637
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 152/365 (41%), Positives = 213/365 (58%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P IESF+D+ + IM +IE YTRPT +Q A+P+ RDL+ CA
Sbjct: 164 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 223
Query: 166 ETGSGKTAAFTIPMIQHCVAQTP------------VGRGDG-PLALVLAPTRELAQQIEK 212
+TGSGKTAAF +P++ P GR P++LVLAPTRELA QI +
Sbjct: 224 QTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYE 283
Query: 213 EVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVS 271
E + S RS + +V GG +I +Q +L G ++VATPGR +D +++G L
Sbjct: 284 EARKFSYRS--RVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCK 341
Query: 272 FVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLTDPVQ 327
+++LDEADRMLDMGFEPQIR +++ +P K T++FSAT P EI+ LA+++L + +
Sbjct: 342 YLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIF 401
Query: 328 VKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRC 387
+ VG+V S + N+ Q KV E+ D+ S L +VFVE K
Sbjct: 402 LAVGRVGSTSENITQ---KVVWVEEADKRSFLLDLLNATGKDS-----LILVFVETKKGA 453
Query: 388 DEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVV 447
D + + L EG ++HG R+Q DRE AL FR+G + ILVAT VA+RGLD+ V HV+
Sbjct: 454 DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVI 513
Query: 448 NLDLP 452
N DLP
Sbjct: 514 NFDLP 518
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 152/365 (41%), Positives = 213/365 (58%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P IESF+D+ + IM +IE YTRPT +Q A+P+ RDL+ CA
Sbjct: 163 DIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 222
Query: 166 ETGSGKTAAFTIPMIQHCVAQTP------------VGRGDG-PLALVLAPTRELAQQIEK 212
+TGSGKTAAF +P++ P GR P++LVLAPTRELA QI +
Sbjct: 223 QTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYE 282
Query: 213 EVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVS 271
E + S RS + +V GG +I +Q +L G ++VATPGR +D +++G L
Sbjct: 283 EARKFSYRS--RVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCK 340
Query: 272 FVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLTDPVQ 327
+++LDEADRMLDMGFEPQIR +++ +P K T++FSAT P EI+ LA+++L + +
Sbjct: 341 YLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIF 400
Query: 328 VKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRC 387
+ VG+V S + N+ Q KV E+ D+ S L +VFVE K
Sbjct: 401 LAVGRVGSTSENITQ---KVVWVEEADKRSFLLDLLNATGKDS-----LILVFVETKKGA 452
Query: 388 DEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVV 447
D + + L EG ++HG R+Q DRE AL FR+G + ILVAT VA+RGLD+ V HV+
Sbjct: 453 DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVI 512
Query: 448 NLDLP 452
N DLP
Sbjct: 513 NFDLP 517
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 151/370 (40%), Positives = 215/370 (58%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + +P IESF D+ + IM +I YTRPT +Q A+P+ + RDL+ CA
Sbjct: 208 DIPVEATGTNSPGHIESFHDVDMGEIIMGNITLSRYTRPTPVQKYAIPIIKTKRDLMACA 267
Query: 166 ETGSGKTAAFTIPMIQHCVAQTP------------------VGRGDGPLALVLAPTRELA 207
+TGSGKTAAF +P++ ++ P V R P++LVLAPTRELA
Sbjct: 268 QTGSGKTAAFLLPVLSQIYSEGPGEALQATKASTQQENGKYVRRKQYPISLVLAPTRELA 327
Query: 208 QQIEKEVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTS 266
QI E + + RS + +V GG +I +Q +L G ++VATPGR +D +++G
Sbjct: 328 LQIYDEARKFAYRS--RVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIG 385
Query: 267 LSRVSFVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYL 322
L +++LDEADRMLDMGFEPQIR +++ +P K QT++FSAT P EI+ LA+++L
Sbjct: 386 LDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQTMMFSATFPKEIQILARDFL 445
Query: 323 TDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVE 382
+ + + VG+V S + N+ Q + V EN+K R LT+VFVE
Sbjct: 446 EEYIFLAVGRVGSTSENITQKVVWVEENDK--RSFLLDLLNATGKDS------LTLVFVE 497
Query: 383 RKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMG 442
K D + + L EG ++HG R+Q DRE AL FR+G I+VAT VA+RGLD+
Sbjct: 498 TKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPIMVATAVAARGLDISN 557
Query: 443 VAHVVNLDLP 452
V HV+N DLP
Sbjct: 558 VKHVINFDLP 567
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 650 (233.9 bits), Expect = 1.7e-63, P = 1.7e-63
Identities = 141/348 (40%), Positives = 205/348 (58%)
Query: 107 VTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAE 166
++ SG+ P P P SF +M I EYT+PT IQ Q +PVALSGRD++G A+
Sbjct: 240 ISRVSGAAP-PRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAK 298
Query: 167 TGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKT 226
TGSGKTAAF PM+ H + Q + GDGP+A+++ PTREL QQI E K ++ + ++
Sbjct: 299 TGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYN-LRS 357
Query: 227 AIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGF 286
V GG ++ EQ L+ G IVV TPGR +DH+++ T+L RVS+++ DEADRM DMGF
Sbjct: 358 VAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGF 417
Query: 287 EPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILE 345
E Q+R + ++ PD+ QTLLFSAT +IE LA++ L DP++V G + +V QI+E
Sbjct: 418 EYQVRSIASHVRPDR-QTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVE 476
Query: 346 KVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALH 405
+ ++FV +K +E++ L EG + LH
Sbjct: 477 ILHSGPSKWNWLTRRLVEFTSSGS-------VLLFVTKKANAEELANNLKQEGHNLGLLH 529
Query: 406 GGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
G +QS+R + DF+ +LVATDVA+RGLD+ + V+N D+ +
Sbjct: 530 GDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVAR 577
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 156/364 (42%), Positives = 219/364 (60%)
Query: 104 NVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLG 163
N+ V V+ SVPA IE F + P++M+++ Y++PT +Q ++P L+ RDL+
Sbjct: 124 NIPVEVSGDSVPAA--IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMS 181
Query: 164 CAETGSGKTAAFTIPMIQHCVAQTPV---------GRGDG-PLALVLAPTRELAQQIEKE 213
CA+TGSGKTAAF +P+IQH +A P GR P ALVL+PTRELA QI KE
Sbjct: 182 CAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKE 241
Query: 214 VKALSRSLDSFKTAIVVGGT-NIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSF 272
S + +TAI+ GG N +Q + LR G I++ATPGR +D ++QG L+ +
Sbjct: 242 ATKFSYK-SNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRY 300
Query: 273 VILDEADRMLDMGFEPQIREVM-QNLPDK--HQTLLFSATMPVEIEALAQEYLTDP-VQV 328
++LDEADRMLDMGFEPQIR+++ Q +P K T +FSAT P EI+ LA+++L D + +
Sbjct: 301 LVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFL 360
Query: 329 KVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCD 388
VG+V S + N+ Q L V+E EK H L +VFVE K +
Sbjct: 361 AVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMNE--------HSENLVLVFVETKRGAN 412
Query: 389 EVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVN 448
E++ L + + +V++HG Q +RE L FR+G ILVAT VA+RGLD+ V HV+N
Sbjct: 413 ELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVIN 472
Query: 449 LDLP 452
DLP
Sbjct: 473 YDLP 476
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 144/385 (37%), Positives = 215/385 (55%)
Query: 76 QPVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKD 135
QP+ WKP + + E+ E VR L + + G P+P PI SF +M I+
Sbjct: 136 QPIKTAWKPPRYIREMSEEEREAVRHELRI---LVEGETPSP-PIRSFREMKFPKGILNG 191
Query: 136 IEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT---PVGRG 192
+ PT IQ Q +P L+GRDL+G A TGSGKT F +P+I + Q P R
Sbjct: 192 LAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERN 251
Query: 193 DGPLALVLAPTRELAQQIEKEVKALSRSLDS-----FKTAIVVGGTNIAEQRSELRGGVS 247
+GP L++ P+RELA+Q + ++ S+ L + ++ + +GG ++E + GV
Sbjct: 252 EGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVH 311
Query: 248 IVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFS 307
IVVATPGR +D L + +L ++ +DEADRM+DMGFE +R + + QTLLFS
Sbjct: 312 IVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFS 371
Query: 308 ATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXX 367
ATMP +I+ A+ L PV + VG+ + + NV Q +E V + KV
Sbjct: 372 ATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEYVKQEAKV-------VYLLDCL 424
Query: 368 XKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNI 427
K+ P ++F E+K D + E L+ +G+ AVA+HGG++Q +R A+ +R G ++
Sbjct: 425 QKTAPP---VLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDV 481
Query: 428 LVATDVASRGLDVMGVAHVVNLDLP 452
LVATDVAS+GLD V HV+N D+P
Sbjct: 482 LVATDVASKGLDFPNVQHVINYDMP 506
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 621 (223.7 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 145/342 (42%), Positives = 203/342 (59%)
Query: 117 PAPIESFTDMCLH-PSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAF 175
P P+ +F + H P IM++I + +PT IQ+QA PV L+G DL+G A+TG+GKT A+
Sbjct: 273 PNPVCTFEEAFAHYPGIMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLAY 332
Query: 176 TIPMIQHCVAQT-PVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTN 234
+P H Q P + +GP LVL PTRELA QIE E S FK+ + GG +
Sbjct: 333 LLPGFIHMDGQPMPRDKRNGPGMLVLTPTRELALQIEAECNKYSYK--GFKSICIYGGGD 390
Query: 235 IAEQRSELRGGVSIVVATPGRFLDHLQQGNT-SLSRVSFVILDEADRMLDMGFEPQIREV 293
Q + GV IV+ATPGR L+ LQ +L +++++LDEADRMLDMGFEPQI ++
Sbjct: 391 RNAQIKVVTSGVDIVIATPGR-LNDLQMNELINLRSITYLVLDEADRMLDMGFEPQIMKI 449
Query: 294 MQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQ-ILEKVSENE 351
+ ++ PD+ QT++ SAT P + LA+ YL DP+ V VG + N +Q + V E+E
Sbjct: 450 ILDIRPDR-QTVMTSATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVLFVQEDE 508
Query: 352 KVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQS 411
K D P ++FV +K + D++S L +G+ +LHG R Q
Sbjct: 509 KKD--------YVFDFIHRMEPLDKVLIFVGKKLKADDLSSDLCLQGIAVQSLHGDREQC 560
Query: 412 DRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
DRE AL+DF++G ILVATD+ASRGLDV + HV N D P+
Sbjct: 561 DREEALQDFKDGRVRILVATDLASRGLDVHDITHVFNYDFPR 602
Score = 40 (19.1 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 107 VTVASGSVPAPAPIE 121
V A+ + PAP PI+
Sbjct: 194 VKAAAAAAPAPTPID 208
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 648 (233.2 bits), Expect = 6.4e-63, P = 6.4e-63
Identities = 146/371 (39%), Positives = 219/371 (59%)
Query: 86 DRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPT 145
+ + +P +++E LR ++D G + P P+ S++ L + I Y +PT
Sbjct: 386 EELKNLSPAEVDE--LRASLDGIKIRG-IDCPKPVTSWSQCGLSAQTISVINSLGYEKPT 442
Query: 146 SIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRE 205
SIQAQA+P SGRD++G A+TGSGKT AF +PM +H Q P+ G+GP+A+++ PTRE
Sbjct: 443 SIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRE 502
Query: 206 LAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQ--G 263
LA QI +E K + L+ + GG I +Q ++L+ G IVV TPGR +D L G
Sbjct: 503 LAVQIFRECKPFLKLLN-IRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAG 561
Query: 264 N-TSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEY 321
T+L R ++++LDEADRM D+GFEPQ+ ++ N+ PD+ QT+LFSAT P +EALA++
Sbjct: 562 RVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDR-QTVLFSATFPRAMEALARKV 620
Query: 322 LTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFV 381
L PV++ VG S + V QI+E E K R T+VFV
Sbjct: 621 LKKPVEITVGGRSVVASEVEQIVEVRPEESKFSRLLELLGELYNNQLDV-----RTLVFV 675
Query: 382 ERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVM 441
+R+ D + L+ G + ++HGG++Q DR+S + D++ G ++L+AT V +RGLDV
Sbjct: 676 DRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVK 735
Query: 442 GVAHVVNLDLP 452
+ VVN D P
Sbjct: 736 SLQLVVNYDCP 746
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 141/330 (42%), Positives = 194/330 (58%)
Query: 123 FTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQH 182
F HP++ I Y PT IQAQA+P ++GRD++G A+TG+GKTAAF +P++ H
Sbjct: 3 FKSFGFHPAVATGIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPIL-H 61
Query: 183 CVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL 242
+ Q GR ALV+APTRELA+QI L R ++ V GG + Q +L
Sbjct: 62 RLQQGERGR---VRALVIAPTRELAEQINDSFVTLGRQT-RLRSVTVYGGVGVNPQVQKL 117
Query: 243 RGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQ 302
+ G +VVA PGR LDH+ QG LSR+ ++LDEAD+M DMGF P IR V+++LP + Q
Sbjct: 118 KAGAEVVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPRRQ 177
Query: 303 TLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXX 362
TLLFSATMP++I LAQ+ L DPV V+VG V+ P V L V ++ K
Sbjct: 178 TLLFSATMPIDIRTLAQDILVDPVTVQVGTVA-PAVTVAHALYPVEQHLKTPLLLELLRH 236
Query: 363 XXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRN 422
++F K R + E L G A +L G +Q+ R++AL FR+
Sbjct: 237 TDTES---------VLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRD 287
Query: 423 GSTNILVATDVASRGLDVMGVAHVVNLDLP 452
G+ ILVATD+A+RG+DV V+HV+N D+P
Sbjct: 288 GTFQILVATDIAARGIDVSQVSHVINYDIP 317
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 137/334 (41%), Positives = 203/334 (60%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
SF + L P I++ + Y PT IQ QA+P L GRDL+ A+TG+GKTA FT+P++Q
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 182 HCVAQTPVGRGDGPL-ALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRS 240
H + + P +G P+ AL+L PTRELA QI + V+ S+ L+ ++ +V GG +I Q
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-IRSLVVFGGVSINPQMM 120
Query: 241 ELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDK 300
+LRGGV ++VATPGR LD Q L +V ++LDEADRMLDMGF IR V+ LP K
Sbjct: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180
Query: 301 HQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXX 360
Q LLFSAT +I+ALA++ L +P++++V + ++ + V Q + V + K +
Sbjct: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240
Query: 361 XXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDF 420
+ +VF K + ++E L +G+ + A+HG ++Q R AL DF
Sbjct: 241 GKGN---------WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADF 291
Query: 421 RNGSTNILVATDVASRGLDVMGVAHVVNLDLPKV 454
++G +LVATD+A+RGLD+ + HVVN +LP V
Sbjct: 292 KSGDIRVLVATDIAARGLDIEELPHVVNYELPNV 325
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 147/372 (39%), Positives = 215/372 (57%)
Query: 80 NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFH 139
N + D + + EQ+ E+R L V VT G P P P+ SF ++K +
Sbjct: 232 NFYTQHDDIAALDDEQVRELRRTLGVKVT---GPSP-PKPVTSFGHFGFDEQLIKAVRKA 287
Query: 140 EYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALV 199
EYT+PT IQAQA+P ALSGRD++G A+TGSGKTAAF PM+ H + Q + GDGP+ L+
Sbjct: 288 EYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQLKPGDGPIGLI 347
Query: 200 LAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDH 259
LAPTREL+ QI E K + + + GG + EQ L G I+VATPGR +D
Sbjct: 348 LAPTRELSLQIYNEAKKFGK-VYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPGRMIDM 406
Query: 260 LQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALA 318
++ T+L RV+F++LDEADRM MGFEPQ+R + ++ PD+ Q L+FSAT IE LA
Sbjct: 407 VKMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDR-QCLMFSATFKKRIERLA 465
Query: 319 QEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTI 378
++ L+DPV++ G ++ ++ Q + V N + + + +
Sbjct: 466 RDVLSDPVRIVQGDLNEANQDITQSVY-VFPNP-LQKWNWLLCHLVKFLSEGS-----VL 518
Query: 379 VFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGL 438
+FV +K + VS L+ + + + LHG +Q+DR + F+ +ILVATDVA+RGL
Sbjct: 519 IFVTKKVDAETVSNNLLIKEYNCLLLHGDMDQADRNKVITQFKRKECDILVATDVAARGL 578
Query: 439 DVMGVAHVVNLD 450
D+ + +VVN D
Sbjct: 579 DIPHIRNVVNYD 590
>CGD|CAL0005725 [details] [associations]
symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 144/372 (38%), Positives = 228/372 (61%)
Query: 94 EQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHE---YTRPTSIQAQ 150
EQ+E +R L+ ++ V VP P I ++ + L P+ + + H+ + +P++IQ+Q
Sbjct: 269 EQVELIRQDLD-NIKVKGTDVPRP--ILKWSHLAL-PTNLSSV-IHDKLKFEKPSAIQSQ 323
Query: 151 AMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQI 210
A+P LSGRD++G A+TGSGKT ++ +PM++H Q GP+ L+L+PTRELA QI
Sbjct: 324 ALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQQFSKDNQGPIGLILSPTRELALQI 383
Query: 211 EKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHL--QQGNT-SL 267
EKE+ ++ ++ + GG++I Q +EL+ GV I+V TPGR +D L G +L
Sbjct: 384 EKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSGRVLNL 443
Query: 268 SRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPV 326
R +FV+LDEADRM D+GFEPQ+ +++ + PD+ QT+LFSAT P ++E LA++ LTDPV
Sbjct: 444 KRCTFVVLDEADRMFDLGFEPQVNKILTQIRPDR-QTVLFSATFPRKMETLAKQILTDPV 502
Query: 327 QVKVGKVSSPTANVIQ--ILEKVS--ENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVE 382
+ VG +S + Q +L + S E +K + + HP +VF E
Sbjct: 503 VIIVGGISVVAPEIKQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQIEHPDSKILVFTE 562
Query: 383 RKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRN--GSTNILVATDVASRGLDV 440
++ DE+ L++ A+A+HGG++Q DR+ A+++F + NIL+AT +A+RGLDV
Sbjct: 563 KQNDADELVANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINILIATSIAARGLDV 622
Query: 441 MGVAHVVNLDLP 452
+ V+N D P
Sbjct: 623 RNLGLVINFDPP 634
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 142/383 (37%), Positives = 225/383 (58%)
Query: 81 NWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHE 140
NW+ +L + + ++VR +LN+ + G P PI +F +M + P + D+ +
Sbjct: 186 NWRAPRYILERDEKDHQKVRDQLNI---ITDGE-DIPPPITTFKEMKI-PKPVIDVLLEK 240
Query: 141 -YTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT---PVGRGDGPL 196
+P+ IQ Q +PV LSGRD++G A TGSGKT FT+PM+ + + P+ +G+GP
Sbjct: 241 GIKKPSPIQVQGLPVILSGRDMIGIAYTGSGKTLVFTLPMVLFALEEECKLPIIQGEGPF 300
Query: 197 ALVLAPTRELAQQIEKEVKALSRSLDS------FKTAIVVGGTNIAEQRSELRGGVSIVV 250
L+L P+RELA+Q V + + +L +T + +GG ++ EQ + GV +++
Sbjct: 301 GLILCPSRELARQTYDLVNSFTNALHKNGGHPQLRTLLAIGGIDLREQEHIFKKGVHMII 360
Query: 251 ATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSATM 310
ATPGR LD L + + ++ LDEADR++D+GFE IR V+ N ++ QTLLFSATM
Sbjct: 361 ATPGRLLDLLNKKKINFKLCKYLGLDEADRLIDLGFEDDIRSVLDNFTNQRQTLLFSATM 420
Query: 311 PVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKS 370
P +I+ A+ L PV+V VG+ + NV Q +E V K+ K+
Sbjct: 421 PKKIQEFARSALVLPVEVNVGRAGAANLNVTQEVEFVKPEAKI-------VYLLECLQKT 473
Query: 371 CHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVA 430
P P+ ++F E K D++ E L+ + + AV++HG ++Q +RESA++ FR G ++LVA
Sbjct: 474 --PPPV-LIFCENKKDVDDIYEYLLLKQVEAVSIHGDKSQDERESAIKAFREGKKDVLVA 530
Query: 431 TDVASRGLDVMGVAHVVNLDLPK 453
TDVAS+GLD + HV+N D+P+
Sbjct: 531 TDVASKGLDFPEIQHVINFDMPR 553
>UNIPROTKB|Q5ADL0 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 144/372 (38%), Positives = 228/372 (61%)
Query: 94 EQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHE---YTRPTSIQAQ 150
EQ+E +R L+ ++ V VP P I ++ + L P+ + + H+ + +P++IQ+Q
Sbjct: 269 EQVELIRQDLD-NIKVKGTDVPRP--ILKWSHLAL-PTNLSSV-IHDKLKFEKPSAIQSQ 323
Query: 151 AMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQI 210
A+P LSGRD++G A+TGSGKT ++ +PM++H Q GP+ L+L+PTRELA QI
Sbjct: 324 ALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQQFSKDNQGPIGLILSPTRELALQI 383
Query: 211 EKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHL--QQGNT-SL 267
EKE+ ++ ++ + GG++I Q +EL+ GV I+V TPGR +D L G +L
Sbjct: 384 EKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSGRVLNL 443
Query: 268 SRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPV 326
R +FV+LDEADRM D+GFEPQ+ +++ + PD+ QT+LFSAT P ++E LA++ LTDPV
Sbjct: 444 KRCTFVVLDEADRMFDLGFEPQVNKILTQIRPDR-QTVLFSATFPRKMETLAKQILTDPV 502
Query: 327 QVKVGKVSSPTANVIQ--ILEKVS--ENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVE 382
+ VG +S + Q +L + S E +K + + HP +VF E
Sbjct: 503 VIIVGGISVVAPEIKQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQIEHPDSKILVFTE 562
Query: 383 RKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRN--GSTNILVATDVASRGLDV 440
++ DE+ L++ A+A+HGG++Q DR+ A+++F + NIL+AT +A+RGLDV
Sbjct: 563 KQNDADELVANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINILIATSIAARGLDV 622
Query: 441 MGVAHVVNLDLP 452
+ V+N D P
Sbjct: 623 RNLGLVINFDPP 634
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 150/365 (41%), Positives = 211/365 (57%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P IE+F+D+ + IM +IE YTRPT +Q A+P+ RDL+ CA
Sbjct: 164 DIPVEATGNNCPPHIENFSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 223
Query: 166 ETGSGKTAAFTIPMIQHCVAQTP------------VGRGDG-PLALVLAPTRELAQQIEK 212
+TGSGKTAAF +P++ P GR P++LVLAPTRELA QI +
Sbjct: 224 QTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 283
Query: 213 EVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVS 271
E + S RS + +V GG + +Q +L G ++VATPGR +D +++G L
Sbjct: 284 EARKFSYRS--RVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCK 341
Query: 272 FVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLTDPVQ 327
+++LDEADRMLDMGFEPQIR +++ +P K T++FSAT P EI+ LA+++L + +
Sbjct: 342 YLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIF 401
Query: 328 VKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRC 387
+ VG+V S + N+ Q KV E++D+ S LT+VFVE K
Sbjct: 402 LAVGRVGSTSENITQ---KVVWVEELDKRSFLLDLLNATGKDS-----LTLVFVETKKGA 453
Query: 388 DEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVV 447
D + L E ++HG R+Q DRE AL FR+G ILVAT VA+RGLD+ V HV+
Sbjct: 454 DSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVI 513
Query: 448 NLDLP 452
N DLP
Sbjct: 514 NFDLP 518
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 145/364 (39%), Positives = 213/364 (58%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P P+ +FT+ L ++ +I Y PT +Q ++P+ ++GRDL+ CA
Sbjct: 171 DIPVEASGHDVPEPVNTFTNPPLDDHLISNIALARYQTPTPVQKYSIPIVMNGRDLMACA 230
Query: 166 ETGSGKTAAFTIPMIQHC-----VAQTPVGRGD-G------PLALVLAPTRELAQQIEKE 213
+TGSGKT F P++ A P G G P +L+LAPTREL QI E
Sbjct: 231 QTGSGKTGGFLFPILSQAYQNGPAAPPPSAAGQFGRQRKAYPTSLILAPTRELVSQIFDE 290
Query: 214 VKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSF 272
+ + RS + +V GG +I Q ++ G ++VATPGR +D +++G SL + +
Sbjct: 291 ARKFAYRSW--VRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKY 348
Query: 273 VILDEADRMLDMGFEPQIREVMQ--NLPDKH--QTLLFSATMPVEIEALAQEYLTDPVQV 328
+ILDEADRMLDMGFEPQIR +++ ++P+ + QTL+FSAT P +I+ LA+++L D V +
Sbjct: 349 LILDEADRMLDMGFEPQIRRIVEGEDMPNVNDRQTLMFSATFPRDIQMLARDFLKDYVFL 408
Query: 329 KVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCD 388
VG+V S + N+ Q +E V +++K R LT++FVE K D
Sbjct: 409 SVGRVGSTSENITQKVEYVEDHDK--RSVLLDILHTHGTTG------LTLIFVETKRMAD 460
Query: 389 EVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVN 448
+SE L+ + A A+HG R Q +RE AL FR+G ILVAT VA+RGLD+ V HV+N
Sbjct: 461 ALSEFLINQRFPATAIHGDRTQRERERALEMFRSGRYPILVATAVAARGLDIPNVTHVIN 520
Query: 449 LDLP 452
DLP
Sbjct: 521 YDLP 524
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 149/365 (40%), Positives = 210/365 (57%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V + P IE+F+D+ + IM +IE YTRPT +Q A+P+ RDL+ CA
Sbjct: 158 DIPVEATGNNCPPHIENFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACA 217
Query: 166 ETGSGKTAAFTIPMIQHCVAQTP------------VGRGDG-PLALVLAPTRELAQQIEK 212
+TGSG TAAF +P++ P GR P++LVLAPTRELA QI +
Sbjct: 218 QTGSGCTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 277
Query: 213 EVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVS 271
E + S RS + +V GG + +Q +L G ++VATPGR +D +++G L
Sbjct: 278 EARKFSYRS--RVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCK 335
Query: 272 FVILDEADRMLDMGFEPQIREVMQN--LPDK--HQTLLFSATMPVEIEALAQEYLTDPVQ 327
+++LDEADRMLDMGFEPQIR +++ +P K T++FSAT P EI+ LA+++L + +
Sbjct: 336 YLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIF 395
Query: 328 VKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRC 387
+ VG+V S + N+ Q KV E++D+ S LT+VFVE K
Sbjct: 396 LAVGRVGSTSENITQ---KVVWVEELDKRSFLLDLLNATGRDS-----LTLVFVETKKGA 447
Query: 388 DEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVV 447
D + L E ++HG R+Q DRE AL FR+G ILVAT VA+RGLD+ V HV+
Sbjct: 448 DSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVI 507
Query: 448 NLDLP 452
N DLP
Sbjct: 508 NFDLP 512
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 142/349 (40%), Positives = 203/349 (58%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
++TV+ G VP P P+ SF P +++++ ++ PT IQAQ+ P+A+ GRD++ A
Sbjct: 145 EITVSGGQVP-P-PLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIA 202
Query: 166 ETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFK 225
+TGSGKT + IP H R GP LVL+PTRELA QI++E RS
Sbjct: 203 KTGSGKTLGYLIPGFLHLQRIRNDSRM-GPTILVLSPTRELATQIQEEAVKFGRS-SRIS 260
Query: 226 TAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMG 285
+ GG Q +L G IVVATPGR D L+ SL ++S+++LDEADRMLDMG
Sbjct: 261 CTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMG 320
Query: 286 FEPQIREVMQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTAN--VIQI 343
FEPQIR++++ +P K QTL+++AT P + +A + L +P QV +G V AN + Q
Sbjct: 321 FEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQH 380
Query: 344 LEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVA 403
+E V+ EK R +S P I+F K CD+++ L + A A
Sbjct: 381 IEVVAPMEKQRRLEQIL--------RSQEPGSKVIIFCSTKRMCDQLTRNLTRQ-FGAAA 431
Query: 404 LHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+HG ++Q +R++ L FR+G T +LVATDVA+RGLDV + VVN D P
Sbjct: 432 IHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFP 480
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 144/367 (39%), Positives = 214/367 (58%)
Query: 104 NVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLG 163
++ V V+ G + P+ FT L+ ++++I+ YT+PT +Q ++P+ SGRDL+
Sbjct: 155 DIPVEVSGGDIE---PVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMA 211
Query: 164 CAETGSGKTAAFTIPMIQHCV----AQTPVGRGDG---------PLALVLAPTRELAQQI 210
CA+TGSGKTA F P++ A PV + G P L+LAPTREL QI
Sbjct: 212 CAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQI 271
Query: 211 EKEVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSR 269
+E + RS + V GG +I Q ++ G ++ ATPGR +D + +G SL+
Sbjct: 272 HEESRKFCYRSW--VRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLAN 329
Query: 270 VSFVILDEADRMLDMGFEPQIREVMQNLP----DKHQTLLFSATMPVEIEALAQEYLTDP 325
+ F++LDEADRMLDMGFEPQIR +++ ++ QTL+FSAT P +I+ LA+++L D
Sbjct: 330 IKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDY 389
Query: 326 VQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKT 385
V + VG+V S + N+ Q + V ++EK + P LT++FVE K
Sbjct: 390 VFLSVGRVGSTSENITQKVVHVEDSEK--------RSYLLDILHTLPPEGLTLIFVETKR 441
Query: 386 RCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAH 445
D +++ L+ A ++HG R Q +RE AL FR+G T+I+VAT VASRGLD+ V H
Sbjct: 442 MADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTH 501
Query: 446 VVNLDLP 452
V+N DLP
Sbjct: 502 VINYDLP 508
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 146/364 (40%), Positives = 214/364 (58%)
Query: 104 NVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLG 163
N+ V ASG P PI F+ L +M++I+ +T+PT +Q ++P+ GRDL+
Sbjct: 139 NIPVD-ASGK-DVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMA 196
Query: 164 CAETGSGKTAAFTIPMIQHCV----------AQTPVGRGDGPLALVLAPTRELAQQIEKE 213
CA+TGSGKT F P+ AQ+ R P ALVLAPTRELA QI +E
Sbjct: 197 CAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEE 256
Query: 214 VKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSF 272
+ + RS + +V GG I Q E+ G ++VATPGR D L++G SL+ + +
Sbjct: 257 ARKFTYRSW--VRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANIKY 314
Query: 273 VILDEADRMLDMGFEPQIREVMQ--NLP--DKHQTLLFSATMPVEIEALAQEYLTDPVQV 328
++LDEADRMLDMGFEPQIR +++ ++P + QTL+FSAT PV+I+ LA+++L + + +
Sbjct: 315 LVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFL 374
Query: 329 KVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCD 388
VG+V S + N+ Q + V + +K S LT++FVE K D
Sbjct: 375 SVGRVGSTSENITQRILYVDDMDK---------KSALLDLLSAEHKGLTLIFVETKRMAD 425
Query: 389 EVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVN 448
++++ L+ + A A+HG R Q++RE AL F+ +ILVAT VA+RGLD+ V HV+N
Sbjct: 426 QLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVTHVIN 485
Query: 449 LDLP 452
DLP
Sbjct: 486 YDLP 489
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 630 (226.8 bits), Expect = 5.1e-61, P = 5.1e-61
Identities = 137/364 (37%), Positives = 208/364 (57%)
Query: 88 VLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSI 147
+ EQ+ E+R L++ +T P+ SF +++ I PT I
Sbjct: 276 IANLTEEQVFEIRKNLDIRMT----GTDLINPVTSFGHYGFDDILLQAIAKQSIETPTPI 331
Query: 148 QAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELA 207
Q QA+P+ALSGRDL+ A+TGSGKTA F P I H + Q + +GDGP+AL LAPTRELA
Sbjct: 332 QKQAIPIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDGPIALFLAPTRELA 391
Query: 208 QQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSL 267
QI E S+ KT ++ GG + +Q EL+ G I+VATPGR +D ++ T L
Sbjct: 392 HQIYLETLKYSKYF-KLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKLKATKL 450
Query: 268 SRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPV 326
+RVS+++LDEAD+M D GF PQ+ ++ ++ PD+ QTLLFSAT +E A+ L+DP+
Sbjct: 451 NRVSYLVLDEADKMFDFGFGPQVLSIVNHVRPDR-QTLLFSATFKPNVEEFARTILSDPI 509
Query: 327 QVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTR 386
++ +G + S +++ QI++ + + D+ + ++FV K
Sbjct: 510 KISIGMIGSANSDITQIVQVLKSDS--DKWNWLTNQLALLLSQGS-----VLIFVSTKVA 562
Query: 387 CDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHV 446
+++S L G LHG +NQ +R ++ F+ G NIL+ATDVA+RGLD+ + +V
Sbjct: 563 VEQLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARGLDIPLIKNV 622
Query: 447 VNLD 450
VN D
Sbjct: 623 VNYD 626
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 146/368 (39%), Positives = 212/368 (57%)
Query: 88 VLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSI 147
V R P +++E LR ++TV G V P P+ +F +M + +T PT I
Sbjct: 62 VARLTPYEVDE--LRRKKEITVRGGDV-CPKPVFAFHHANFPQYVMDVLMDQHFTEPTPI 118
Query: 148 QAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELA 207
Q Q P+ALSGRD++G A+TGSGKT A+ +P I H Q + RGDGP+ VL L
Sbjct: 119 QCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPIVSVLPFFSTLF 178
Query: 208 QQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE-LRGGVSIVVATPGRFLDHLQQGNTS 266
+ F + G ++ QR E L V I +ATPGR +D L+ G T+
Sbjct: 179 SVYRGGTDFKFKCSSLFWVCFL--GQSLKGQRLEWLSQCVEICIATPGR-IDFLESGKTN 235
Query: 267 LSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDP 325
L R ++++LDEADRMLDMGFEPQIR+++ + PD+ QTL++SAT P E+ LA+++L D
Sbjct: 236 LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLRDY 294
Query: 326 VQVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERK 384
Q+ VG + S N++QI++ E+EK D ++ TI+FVE K
Sbjct: 295 TQINVGNLELSANHNILQIVDVCMESEK-DHKLIQLMEEIMAEKEN-----KTIIFVETK 348
Query: 385 TRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVA 444
RCD+++ + +G A+ +HG ++Q +R+ L +FR+G IL+ATDVASRGLDV V
Sbjct: 349 RRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVK 408
Query: 445 HVVNLDLP 452
V+N D P
Sbjct: 409 FVINYDYP 416
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 628 (226.1 bits), Expect = 2.3e-60, P = 2.3e-60
Identities = 138/340 (40%), Positives = 208/340 (61%)
Query: 117 PAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFT 176
P PI+++ + M+ + + +PT IQ QA+P +SGRDL+G A+TGSGKT AF
Sbjct: 506 PKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFI 565
Query: 177 IPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIA 236
+PM +H + Q + GDG +A+++APTREL QI K+++ S+SL + V GGT I+
Sbjct: 566 LPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSL-GLRPVCVYGGTGIS 624
Query: 237 EQRSELRGGVSIVVATPGRFLDHLQQGN---TSLSRVSFVILDEADRMLDMGFEPQIREV 293
EQ +EL+ G I+V TPGR +D L + T+L RV++V+LDEADRM DMGFEPQ+ +
Sbjct: 625 EQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 684
Query: 294 MQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEK 352
+ N+ PD+ QT++FSAT P ++EALA+ L P++V VG S V Q + ++++ K
Sbjct: 685 IDNVRPDR-QTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAK 743
Query: 353 VDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSD 412
+ IVFV+++ D + L+ ++LHGG +Q D
Sbjct: 744 FFKLLELLGIYQEAGS--------IIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFD 795
Query: 413 RESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
R+S + DF++G +L+AT VA+RGLDV + VVN D+P
Sbjct: 796 RDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVP 835
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 145/381 (38%), Positives = 211/381 (55%)
Query: 94 EQIEEVRLRL-NVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAM 152
E++ E R+ D ++ P P+ S+ + L ++K +E Y +P+ IQ A+
Sbjct: 285 EEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAI 344
Query: 153 PVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRG---DGPLALVLAPTRELAQQ 209
P+ L RD++G AETGSGKTAAF +PM+ + P+ +GP A+V+APTRELAQQ
Sbjct: 345 PLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQ 404
Query: 210 IEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSR 269
IE+E + L F+ +VGG +I EQ ++ G IV+ATPGR +D L++ L++
Sbjct: 405 IEEETVKFAHYL-GFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQ 463
Query: 270 VSFVILDEADRMLDMGFEPQIREVMQNLPDKH-----------------QTLLFSATMPV 312
++V+LDEADRM+DMGFEPQ+ V+ +P + T +FSATMP
Sbjct: 464 CNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPP 523
Query: 313 EIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCH 372
+E LA++YL +PV V +G T + Q + + E+EK R
Sbjct: 524 GVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLLDELGEKTA---- 579
Query: 373 PFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATD 432
IVFV K CD +++ L G LHGG++Q RE +L FR N+LVATD
Sbjct: 580 -----IVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATD 634
Query: 433 VASRGLDVMGVAHVVNLDLPK 453
V RG+D+ VAHV+N D+PK
Sbjct: 635 VVGRGIDIPDVAHVINYDMPK 655
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 147/349 (42%), Positives = 205/349 (58%)
Query: 118 APIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTI 177
AP+ SF D+ L ++ +I+ +YT+PT +Q A+P+ L RDL+ CA+TGSGKTAAF
Sbjct: 244 APLNSFADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLF 303
Query: 178 PMIQHCV---------AQTP-VGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTA 227
P+I + A P V R P ALVLAPTRELAQQI E S +
Sbjct: 304 PIISGILLDGAPEAPPAYKPGVPRAACPRALVLAPTRELAQQIFDEANKFSYG-SPVSSV 362
Query: 228 IVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFE 287
++ GG + Q +EL G I+VAT GR +D L +G SLS++ +++LDEADRMLDMGFE
Sbjct: 363 VIYGGAEVFHQINELDRGCDILVATTGRLVDLLMRGRVSLSKIKYLVLDEADRMLDMGFE 422
Query: 288 PQIREVMQ--NLPD--KHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQI 343
PQIR+++ ++P QTL+FSAT P +I+ LA ++L + + +KVG V + T N+ Q
Sbjct: 423 PQIRQIISEFDMPGCRDRQTLMFSATFPKQIQNLAADFLYNYIFLKVGVVGT-TQNITQR 481
Query: 344 LEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVA 403
+E V E +K KS L ++FVE K CD ++ L
Sbjct: 482 IEYVVEEDK-----NSYLLDYLSGLKSDG---LCLIFVETKRSCDTLTYFLNQRNFPTTC 533
Query: 404 LHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+HG Q +RE+AL+ FR+ +T LVATD+ASRGL + V V+N DLP
Sbjct: 534 IHGDLTQPERENALQSFRSFATPFLVATDIASRGLHIGNVNLVINFDLP 582
>UNIPROTKB|F1NVJ6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
Length = 642
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 152/386 (39%), Positives = 219/386 (56%)
Query: 77 PVFNN-WKPSDRVLRFNPEQIEEVRLRLNVDVT--VASGSVPA-PAPIESFTDMC-LHPS 131
P+ N +K S R +PE++E R N + + G P P+ F D+ +P
Sbjct: 191 PIEKNFYKESSRTACMSPEEVELWRKENNNIICDDLKEGEKRCIPNPVCKFEDVFEQYPD 250
Query: 132 IMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT-PVG 190
IM +I + +PT IQ+QA P+ L G DL+G A+TG+GKT A+ +P H +Q P
Sbjct: 251 IMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLASQPIPKD 310
Query: 191 RGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVV 250
+ GP LVLAPTRELA Q+E E L + FK+ + GG + Q + + GV IV+
Sbjct: 311 KRGGPGMLVLAPTRELALQVEAE--CLKYTYKGFKSICIYGGGDRKAQINVVTKGVDIVI 368
Query: 251 ATPGRFLDHLQQGN-TSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSA 308
ATPGR L+ LQ N +L +++ + +EADRMLDMGFEPQI +++ ++ PD+ QT++ SA
Sbjct: 369 ATPGR-LNDLQMNNFINLKSITY-LANEADRMLDMGFEPQIMKILIDVRPDR-QTVMMSA 425
Query: 309 TMPVEIEALAQEYLTDPVQVKVGKVSSPTANVI-QILEKVSENEKVDRXXXXXXXXXXXX 367
T P + LA+ YL +P+ V VG + N + Q + ++E EK
Sbjct: 426 TWPDGVRRLAKSYLRNPMIVYVGTLDLAAVNTVEQKVIVINEEEK--------KAFMENF 477
Query: 368 XKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNI 427
S P I+FV +K+ D+++ L +G+ +LHG R Q DRE AL DF+ G I
Sbjct: 478 IDSMKPKDKAIIFVGKKSTADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRI 537
Query: 428 LVATDVASRGLDVMGVAHVVNLDLPK 453
LVATD+ASRGLDV + HV N D P+
Sbjct: 538 LVATDLASRGLDVHDITHVFNFDFPR 563
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 144/345 (41%), Positives = 202/345 (58%)
Query: 115 PAPAPIESFTD--MCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKT 172
P P P +F D C +P +M++I+ + +PT IQ+QA P+ L G DL+G A+TG+GKT
Sbjct: 235 PIPNPTCTFDDAFQC-YPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKT 293
Query: 173 AAFTIPMIQHCVAQTPV-GRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVG 231
+ +P H V Q + G+ + P LVL PTRELA Q+E E S ++ V G
Sbjct: 294 LCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGE--CCKYSYKGLRSVCVYG 351
Query: 232 GTNIAEQRSELRGGVSIVVATPGRFLDHLQQGN-TSLSRVSFVILDEADRMLDMGFEPQI 290
G N EQ EL+ GV I++ATPGR L+ LQ N +L +++++LDEAD+MLDMGFEPQI
Sbjct: 352 GGNRDEQIEELKKGVDIIIATPGR-LNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQI 410
Query: 291 REVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSS-PTANVIQILEKVS 348
+++ ++ PD+ QT++ SAT P + LAQ YL +P+ V VG + ++V Q + +
Sbjct: 411 MKILLDVRPDR-QTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTT 469
Query: 349 ENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGR 408
E EK +S IVFV RK D +S L+ + +LHG R
Sbjct: 470 EEEKWSHMQTFL--------QSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDR 521
Query: 409 NQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
Q DRE AL +F+ G IL+ATD+ASRGLDV V HV N D P+
Sbjct: 522 EQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPR 566
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 150/385 (38%), Positives = 219/385 (56%)
Query: 77 PVFNN-WKPSDRVLRFNPEQIEEVRLRLNVDVT--VASGSVPA-PAPIESFTDMC-LHPS 131
P+ N +K S R +PE++E R N + + G P P+ F D+ +P
Sbjct: 4 PIEKNFYKESSRTACMSPEEVELWRKENNNIICDDLKEGEKRCIPNPVCKFEDVFEQYPD 63
Query: 132 IMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT-PVG 190
IM +I + +PT IQ+QA P+ L G DL+G A+TG+GKT A+ +P H +Q P
Sbjct: 64 IMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLASQPIPKD 123
Query: 191 RGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVV 250
+ GP LVLAPTRELA Q+E E L + FK+ + GG + Q + + GV IV+
Sbjct: 124 KRGGPGMLVLAPTRELALQVEAE--CLKYTYKGFKSICIYGGGDRKAQINVVTKGVDIVI 181
Query: 251 ATPGRFLDHLQQGN-TSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSA 308
ATPGR L+ LQ N +L +++++LDEADRMLDMGFEPQI +++ ++ PD+ QT++ SA
Sbjct: 182 ATPGR-LNDLQMNNFINLKSITYLVLDEADRMLDMGFEPQIMKILIDVRPDR-QTVMMSA 239
Query: 309 TMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXX 368
T P + LA+ YL +P+ V VG + + V+ L+ + + D+
Sbjct: 240 TWPDGVRRLAKSYLRNPMIVYVGTLDLAVSGVV--LKYL----QFDKDIFTWKYMQVNAQ 293
Query: 369 KSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNIL 428
C + +VFV+ D+++ L +G+ +LHG R Q DRE AL DF+ G IL
Sbjct: 294 SFCTD--VVVVFVQLHVVADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRIL 351
Query: 429 VATDVASRGLDVMGVAHVVNLDLPK 453
VATD+ASRGLDV + HV N D P+
Sbjct: 352 VATDLASRGLDVHDITHVFNFDFPR 376
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 136/334 (40%), Positives = 198/334 (59%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
SF + L +++ I Y PT +Q QA+PV L RD++ A+TG+GKTA FT+P++Q
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70
Query: 182 HC-VAQTPVGRGDGPL--ALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQ 238
V++ P+ R P+ AL+L PTRELA Q+ + V+A + L K +V GG +I Q
Sbjct: 71 RLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLP-LKATVVHGGVSIKPQ 129
Query: 239 RSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLP 298
+ LR GV I+VATPGR LD + QG +LSRV F +LDEADRMLDMGF P IR +++ LP
Sbjct: 130 INHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLP 189
Query: 299 DKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXX 358
+ Q LLFSAT EI+ L + L P ++V + ++ A + ++ V DR
Sbjct: 190 ESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPV------DRQRK 243
Query: 359 XXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALR 418
K+ +VF K + +S+ L ++GL + A+HG ++Q+ R AL
Sbjct: 244 RELLSFMIGSKNWRQ---VLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALT 300
Query: 419 DFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
F+ G +LVATDVA+RGLD+ + HV+N +LP
Sbjct: 301 QFKQGKIRVLVATDVAARGLDIDKLPHVINFELP 334
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 136/334 (40%), Positives = 198/334 (59%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
SF + L +++ I Y PT +Q QA+PV L RD++ A+TG+GKTA FT+P++Q
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70
Query: 182 HC-VAQTPVGRGDGPL--ALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQ 238
V++ P+ R P+ AL+L PTRELA Q+ + V+A + L K +V GG +I Q
Sbjct: 71 RLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLP-LKATVVHGGVSIKPQ 129
Query: 239 RSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLP 298
+ LR GV I+VATPGR LD + QG +LSRV F +LDEADRMLDMGF P IR +++ LP
Sbjct: 130 INHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLP 189
Query: 299 DKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXX 358
+ Q LLFSAT EI+ L + L P ++V + ++ A + ++ V DR
Sbjct: 190 ESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPV------DRQRK 243
Query: 359 XXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALR 418
K+ +VF K + +S+ L ++GL + A+HG ++Q+ R AL
Sbjct: 244 RELLSFMIGSKNWRQ---VLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALT 300
Query: 419 DFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
F+ G +LVATDVA+RGLD+ + HV+N +LP
Sbjct: 301 QFKQGKIRVLVATDVAARGLDIDKLPHVINFELP 334
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 615 (221.5 bits), Expect = 4.7e-59, P = 4.7e-59
Identities = 143/362 (39%), Positives = 214/362 (59%)
Query: 95 QIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPV 154
++ + R L V +T G P PI+S+ L + ++ +Y +PTSIQAQ +P
Sbjct: 487 EVLDFRSELGVKIT---GK-DCPKPIQSWAQAGLTEKVHLLLKKFQYEKPTSIQAQTIPA 542
Query: 155 ALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEV 214
++GRDL+G A TGSGKT AF +PM +H +AQ G+G +AL+++PTRELA QI E
Sbjct: 543 IMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHVEC 602
Query: 215 KALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGN---TSLSRVS 271
K S+ L +TA V GG +I+EQ +EL+ G IVV TPGR +D L N T+L RV+
Sbjct: 603 KKFSKVL-GLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVT 661
Query: 272 FVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKV 330
F++LDEADRM DMGF PQI ++ ++ PD+ QT++FSAT P ++E +A++ L P+++
Sbjct: 662 FLVLDEADRMFDMGFGPQINCIVDSIRPDR-QTIMFSATFPPKVENVAKKILNKPLEIIA 720
Query: 331 GKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEV 390
G S ++++ Q +E V E R H + ++F R+ D +
Sbjct: 721 GGRSIVSSDIEQFVE-VRPTETRFRRLIELLSIWY------HKGQI-LIFTNRQETTDNL 772
Query: 391 SEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLD 450
L ++LHG ++Q+DR+ + DF+N IL+AT +ASRGLD+ + VVN D
Sbjct: 773 YRQLSNSQYQCLSLHGSKDQTDRDETISDFKNKVKTILIATPLASRGLDIKDLNLVVNFD 832
Query: 451 LP 452
P
Sbjct: 833 CP 834
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 541 (195.5 bits), Expect = 8.1e-59, Sum P(2) = 8.1e-59
Identities = 112/243 (46%), Positives = 162/243 (66%)
Query: 117 PAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFT 176
P PI+ + L I+ ++ Y +P IQAQA+P+ +SGRD +G A+TGSGKT F
Sbjct: 392 PRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFV 451
Query: 177 IPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIA 236
+PM++H Q PV GDGP+ LV+APTREL QQI +++ S++L V GG+ +A
Sbjct: 452 LPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVP-VYGGSGVA 510
Query: 237 EQRSELRGGVSIVVATPGRFLDHL--QQGN-TSLSRVSFVILDEADRMLDMGFEPQIREV 293
+Q SEL+ G IVV TPGR +D L G T+L RV+++++DEADRM DMGFEPQI +
Sbjct: 511 QQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRI 570
Query: 294 MQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEK 352
+QN+ PD+ QT+LFSAT P ++E LA++ L PV+++VG S ++ Q++E E+E+
Sbjct: 571 VQNIRPDR-QTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEIRPESER 629
Query: 353 VDR 355
R
Sbjct: 630 FSR 632
Score = 97 (39.2 bits), Expect = 8.1e-59, Sum P(2) = 8.1e-59
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 413 RESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+E ++ DF++ N+L+AT VA+RGLDV + VVN D P
Sbjct: 653 QEKSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAP 692
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 134/332 (40%), Positives = 194/332 (58%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F D L +MK I + T IQAQ +P+ LS +D++G A+TG+GKTAAF IP+++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
++P A+V+APTRELA Q+ +E+ + + + K + GG +I Q
Sbjct: 64 KINPESP-----NIQAIVIAPTRELAIQVSEELYKIGQDKRA-KVLPIYGGQDIGRQIRA 117
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L+ +I+V TPGR LDH+ + L+ V+ V++DEAD ML+MGF I ++ N+P +H
Sbjct: 118 LKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEH 177
Query: 302 QTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXX 361
QTLLFSATMP I+ +A+ ++T+P VKV +N+ Q +V E +K D
Sbjct: 178 QTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLTRLLD 237
Query: 362 XXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFR 421
P L IVF K R DE++EAL G A +HG Q+ R ALR F+
Sbjct: 238 IQS--------P-ELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFK 288
Query: 422 NGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
G+ +LVATDVA+RGLD+ GV HV N D+P+
Sbjct: 289 EGAIEVLVATDVAARGLDISGVTHVYNFDVPQ 320
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 135/333 (40%), Positives = 196/333 (58%)
Query: 123 FTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQH 182
F+++ L+P ++K IE Y PT IQA A+P AL GRD+LG A+TG+GKTA+FT+PMI
Sbjct: 4 FSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMIT- 62
Query: 183 CVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL 242
+A+ R P +LVL PTRELA Q+ + ++ L K A+++GG + EQ + +
Sbjct: 63 LLARGRA-RARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTK-ALLIGGVSFKEQDALI 120
Query: 243 RGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQ 302
GV +++ATPGR LDH ++G L+ V +++DEADRMLDMGF P I + P Q
Sbjct: 121 DRGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFTRQ 180
Query: 303 TLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQ--ILEKVSENEK-VDRXXXX 359
TL FSATM EIE + +L+ P +++V + ++ + + Q +L K S ++
Sbjct: 181 TLFFSATMAPEIERITNTFLSAPARIEVARQATASETIEQGVVLFKGSRRDREASEKRAV 240
Query: 360 XXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
+ C I+F RKT D V+++L G A +HG +QS R L
Sbjct: 241 LRALIDAEGEKCTN---AIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDG 297
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
FR G +LVA+DVA+RGLDV V+HV N D+P
Sbjct: 298 FREGKLRLLVASDVAARGLDVPSVSHVFNFDVP 330
>ASPGD|ASPL0000051195 [details] [associations]
symbol:AN1634 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 EMBL:BN001307
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000026 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:P09052
HOGENOM:HOG000268796 OMA:PIRNWKE RefSeq:XP_659238.1
ProteinModelPortal:Q5BCU6 EnsemblFungi:CADANIAT00008272
GeneID:2874876 KEGG:ani:AN1634.2 OrthoDB:EOG4KPXK0 Uniprot:Q5BCU6
Length = 782
Score = 392 (143.0 bits), Expect = 1.6e-58, Sum P(2) = 1.6e-58
Identities = 86/218 (39%), Positives = 132/218 (60%)
Query: 91 FNPEQIEEVRLR----LNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTS 146
++ +++E +R R D +A+ P P+ S+ + L +++ ++ Y PT
Sbjct: 312 WSEKKLEHMRERDWRIFKEDFNIATKGGSVPNPMRSWDESGLPKRLLELVDRVGYKEPTP 371
Query: 147 IQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPV------GRGDGPLALVL 200
IQ A+P+A+ RDL+G A TGSGKTAAF +P++ + +A+ P + DGP A+VL
Sbjct: 372 IQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLCY-IAELPRIDEFEWRKNDGPYAIVL 430
Query: 201 APTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHL 260
APTRELAQQIE E K + L F +VGG + EQ LR G I++ATPGR +D +
Sbjct: 431 APTRELAQQIEIEAKKFTEPL-GFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCI 489
Query: 261 QQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLP 298
++ LS+ +VI+DEADRM+D+GFE + +++ LP
Sbjct: 490 ERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALP 527
Score = 243 (90.6 bits), Expect = 1.6e-58, Sum P(2) = 1.6e-58
Identities = 55/154 (35%), Positives = 85/154 (55%)
Query: 299 DKH-QTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXX 357
D++ QT++++ATMP +E +A++YL P V +G V Q +E ++ +K R
Sbjct: 552 DRYRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDK--RKK 609
Query: 358 XXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESAL 417
+ P IVFV K CD ++ + G +V LHG + Q RE+AL
Sbjct: 610 RLGEILSSGDFR-----PPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAAL 664
Query: 418 RDFRNGSTNILVATDVASRGLDVMGVAHVVNLDL 451
RNGST++LVATD+A RG+DV V+ V+N ++
Sbjct: 665 ASVRNGSTDVLVATDLAGRGIDVPDVSLVINFNM 698
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 144/345 (41%), Positives = 201/345 (58%)
Query: 115 PAPAPIESFTDMC-LHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTA 173
P P PI F D +P +MK I+ + +PT IQ+QA P+ L G DL+G A+TG+GKT
Sbjct: 217 PIPNPICKFEDAFGPYPELMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTL 276
Query: 174 AFTIPMIQHCVAQTPVGRG--DGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVG 231
++ +P H +Q PV RG +GP LVL PTRELA Q+ E S K+ + G
Sbjct: 277 SYLMPGFIHLNSQ-PVSRGKRNGPGMLVLTPTRELALQVGAECSKYSYK--GLKSVCIYG 333
Query: 232 GTNIAEQRSELRGGVSIVVATPGRFLDHLQQGN-TSLSRVSFVILDEADRMLDMGFEPQI 290
G N Q ++ GV I++ATPGR L+ LQ N +L +++++LDEAD+MLD+GFE QI
Sbjct: 334 GGNRKGQIQDIMKGVDIIIATPGR-LNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQI 392
Query: 291 REVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVI-QILEKVS 348
+++ ++ PD+ QT++ SAT P I LA YL +P+ V VG + + + Q + +
Sbjct: 393 MKILLDVRPDR-QTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITT 451
Query: 349 ENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGR 408
E EK +S P IVFV RK D++S L +G+ +LHG R
Sbjct: 452 EEEK--------RSLFQEFLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDR 503
Query: 409 NQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
QSDRE AL DF+ G IL+ATD+ASRGLDV V HV N + P+
Sbjct: 504 EQSDRERALDDFKTGKVKILIATDLASRGLDVSDVTHVFNYNFPR 548
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 144/345 (41%), Positives = 201/345 (58%)
Query: 115 PAPAPIESFTDMC-LHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTA 173
P P PI F D +P +MK I+ + +PT IQ+QA P+ L G DL+G A+TG+GKT
Sbjct: 208 PIPNPICKFEDAFGPYPELMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTL 267
Query: 174 AFTIPMIQHCVAQTPVGRG--DGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVG 231
++ +P H +Q PV RG +GP LVL PTRELA Q+ E S K+ + G
Sbjct: 268 SYLMPGFIHLNSQ-PVSRGKRNGPGMLVLTPTRELALQVGAECSKYSYK--GLKSVCIYG 324
Query: 232 GTNIAEQRSELRGGVSIVVATPGRFLDHLQQGN-TSLSRVSFVILDEADRMLDMGFEPQI 290
G N Q ++ GV I++ATPGR L+ LQ N +L +++++LDEAD+MLD+GFE QI
Sbjct: 325 GGNRKGQIQDIMKGVDIIIATPGR-LNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQI 383
Query: 291 REVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVI-QILEKVS 348
+++ ++ PD+ QT++ SAT P I LA YL +P+ V VG + + + Q + +
Sbjct: 384 MKILLDVRPDR-QTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITT 442
Query: 349 ENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGR 408
E EK +S P IVFV RK D++S L +G+ +LHG R
Sbjct: 443 EEEK--------RSLFQEFLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDR 494
Query: 409 NQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
QSDRE AL DF+ G IL+ATD+ASRGLDV V HV N + P+
Sbjct: 495 EQSDRERALDDFKTGKVKILIATDLASRGLDVSDVTHVFNYNFPR 539
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 152/389 (39%), Positives = 219/389 (56%)
Query: 77 PVFNNWK-PSDRVLRFNPEQIEEVRLRLNVDVT---VASGSV-PAPAPIESFTDM--CLH 129
PV N+ S++ + EQ++ R + N ++ + G P P P +F D C +
Sbjct: 192 PVKKNFYIESEKTSSMSQEQVDNWR-KENYNIICDDLKDGEKRPLPNPTCNFEDAFHC-Y 249
Query: 130 PSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPV 189
P +M++IE + +PT IQ+QA P+ L G DL+G A+TG+GKT ++ +P H +Q +
Sbjct: 250 PEVMRNIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHIDSQPVL 309
Query: 190 GRG-DGPLALVLAPTRELAQQIEKEVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVS 247
R +GP LVL PTRELA Q++ E S R L K+ + GG + Q +L G
Sbjct: 310 QRARNGPGMLVLTPTRELALQVDAECSEYSYRGL---KSVCIYGGGDRDGQIKDLSKGAD 366
Query: 248 IVVATPGRFLDHLQQGN-TSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLL 305
I++ATPGR D LQ N L +++++LDEAD+MLDMGFEPQI +++ ++ PD+ QT++
Sbjct: 367 IIIATPGRLHD-LQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMKILLDVRPDR-QTVM 424
Query: 306 FSATMPVEIEALAQEYLTDPVQVKVGKVSS-PTANVIQILEKVSENEKVDRXXXXXXXXX 364
SAT P + LAQ YL +P+ V VG + + V Q + +E+EK
Sbjct: 425 TSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNIIVTTEDEK--------RSHI 476
Query: 365 XXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGS 424
S P I+FV RK D +S L + +LHG R QSDRE AL+ F+ G
Sbjct: 477 QAFIDSMSPKDKVIIFVSRKAVADHLSSDLGIRRISVESLHGNREQSDRERALKSFKTGK 536
Query: 425 TNILVATDVASRGLDVMGVAHVVNLDLPK 453
IL+ATD+ASRGLDV V HV N D P+
Sbjct: 537 VRILIATDLASRGLDVHDVTHVYNYDFPR 565
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 140/359 (38%), Positives = 201/359 (55%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D+ V PA I +F + L S+ +I Y +PT +Q +P+ +GRDL+ CA
Sbjct: 166 DILVDVSGTNLPAAIMTFEEAKLCESLENNISRSGYVKPTPVQKYGLPIISAGRDLMACA 225
Query: 166 ETGSGKTAAFTIPMIQHC----VAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSL 221
+TGSGKTAAF +P++Q VA + P A+++APTREL QI +E + S
Sbjct: 226 QTGSGKTAAFLLPILQQLMADGVAASRFSEIQEPEAVIVAPTRELINQIYQEARKFSFGT 285
Query: 222 DSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRM 281
+ +V GG N Q E+ G +++ TPGR LD + +G LS+V ++LDEADRM
Sbjct: 286 -CVRPVVVYGGVNTGYQMREIEKGCNVLCGTPGRLLDMIGRGKVGLSKVRHLVLDEADRM 344
Query: 282 LDMGFEPQIREVMQN--LPDKH--QTLLFSATMPVEIEALAQEYL-TDPVQVKVGKVSSP 336
LDMGFEP +R ++ + +P K QTL+FSAT P +I+ LA ++L D + V VG V
Sbjct: 345 LDMGFEPDMRRLVGSPGMPSKEERQTLMFSATFPEDIQRLAADFLKVDYLFVAVGVVGGA 404
Query: 337 TANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVA 396
+V Q +V++ K ++ T+VFVE K + D ++ L
Sbjct: 405 CTDVEQTFLQVTKFNKREQLLDLLRTIGSER---------TMVFVETKRQADFIAAFLCQ 455
Query: 397 EGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVL 455
E + ++HG R Q +RE AL DFR+G +LVAT VASRGLD+ V HVVN DLP +
Sbjct: 456 EKVPTTSIHGDREQREREKALADFRSGKCPVLVATSVASRGLDIPDVQHVVNFDLPNTI 514
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 605 (218.0 bits), Expect = 4.6e-58, P = 4.6e-58
Identities = 137/352 (38%), Positives = 197/352 (55%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
+VT ++PAP +F L P I++++ + PT IQAQ P+AL RD++ A
Sbjct: 422 EVTTTGENIPAP--YITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIA 479
Query: 166 ETGSGKTAAFTIP---MIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLD 222
+TGSGKT + IP +++HC + +GP L+LAPTRELA QI+ E RS
Sbjct: 480 KTGSGKTLGYLIPAFILLRHCRNDSR----NGPTVLILAPTRELATQIQDEALRFGRS-S 534
Query: 223 SFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRML 282
+ GG Q EL G IVVATPGR D L+ +VS ++LDEADRML
Sbjct: 535 RISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRML 594
Query: 283 DMGFEPQIREVMQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTAN--V 340
DMGFEPQIR+++ +P + QTL+++AT P E+ +A + L +PVQV +G+V AN +
Sbjct: 595 DMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAI 654
Query: 341 IQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLH 400
Q +E V + EK +R K I+F K CD ++ + V
Sbjct: 655 TQYVEVVPQMEK-ERRLEQILRSQERGSK-------VIIFCSTKRLCDHLARS-VGRHFG 705
Query: 401 AVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
AV +HG + Q +R+ L FR+G + +L+ATDVA+RGLD+ + V+N D P
Sbjct: 706 AVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFP 757
>DICTYBASE|DDB_G0277857 [details] [associations]
symbol:helB2 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0277857 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 GO:GO:0000375 HSSP:P09052 EMBL:X81824
RefSeq:XP_642321.1 ProteinModelPortal:Q54Y81 STRING:Q54Y81
EnsemblProtists:DDB0219950 GeneID:8621527 KEGG:ddi:DDB_G0277857
OMA:DRYRDND Uniprot:Q54Y81
Length = 834
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 141/373 (37%), Positives = 212/373 (56%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D +++ AP PI ++ + L I++ I Y +P+ IQ Q++P++L+GRD+LG A
Sbjct: 398 DFNISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIA 457
Query: 166 ETGSGKTAAFTIPMIQHCVAQ---TPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLD 222
ETGSGKT AF IPM+ + Q T DGP ALV+APTREL QQIEKE + ++
Sbjct: 458 ETGSGKTCAFVIPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQHF- 516
Query: 223 SFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRML 282
F+ +VGG +I +Q ++ G I++ATPGR D L++ L++ ++++LDEAD M+
Sbjct: 517 GFRVVSLVGGQSIEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVLNQCNYIVLDEADMMI 576
Query: 283 DMGFEPQIREVMQNLP------------DKHQ---------TLLFSATMPVEIEALAQEY 321
D+GFEPQ+ V+ +P +K + T+LFSATMP +E L+++Y
Sbjct: 577 DLGFEPQVTSVLDAMPSSFLKSEDDEMAEKQESDRSHIYRTTILFSATMPPLVEKLSKKY 636
Query: 322 LTDPVQVKVGKVSSPTANVIQILEKV-SENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVF 380
L P + +G+ + Q + V SEN+K + K P P+ I+F
Sbjct: 637 LRRPCTITIGEAGKVVDRIRQTVIFVKSENDKKEHLTQLI--------KDGPPPPI-IIF 687
Query: 381 VERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDV 440
V +K CD ++ L + LH GR+Q RE+AL F+ +L+AT VASRG+ V
Sbjct: 688 VNKKKHCDIIAPVLEECRVSYTILHSGRSQEQREAALEGFKKRKYEVLIATGVASRGIHV 747
Query: 441 MGVAHVVNLDLPK 453
GV HV+N D+PK
Sbjct: 748 DGVTHVINFDIPK 760
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 135/336 (40%), Positives = 190/336 (56%)
Query: 119 PIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIP 178
P F + P+ + + ++ P+ IQAQ+ P+A+ RD++ A+TGSGKT + IP
Sbjct: 227 PAAGFNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIP 286
Query: 179 MIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQ 238
H R GP LVL+PTRELA QI+ E +S A + GG Q
Sbjct: 287 GFMHLQRIHNDSRM-GPTILVLSPTRELATQIQVEALKFGKS-SKISCACLYGGAPKGPQ 344
Query: 239 RSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLP 298
E+ GV IVVATPGR D L+ SL +VS+++LDEADRMLDMGFEPQIR+++ +P
Sbjct: 345 LKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVP 404
Query: 299 DKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTAN--VIQILEKVSENEKVDRX 356
K QTL+++AT P E+ +A + L +P QV +G V AN + Q +E ++ EK R
Sbjct: 405 TKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRL 464
Query: 357 XXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESA 416
+S P I+F K CD+++ L A A+HG ++Q++R+
Sbjct: 465 EQIL--------RSQEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDV 515
Query: 417 LRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
L FR+G T +LVATDVA+RGLDV + VVN D P
Sbjct: 516 LNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFP 551
>WB|WBGene00013214 [details] [associations]
symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
Uniprot:Q9XVZ6
Length = 504
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 147/390 (37%), Positives = 215/390 (55%)
Query: 76 QPVFNN-WKPSDRVLRFNPEQIEEVRLR---LNVDVTVASGSVPAPAPIESFTDMC-LHP 130
+P+ + +K + +PEQ++E+ + V +V P P+ SF +
Sbjct: 34 KPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAFGSNA 93
Query: 131 SIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQ-TPV 189
SIM +I + + +P+ IQ+Q P+ LSG+D +G ++TGSGKT AF +P + H AQ
Sbjct: 94 SIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQY 153
Query: 190 GRGD-----GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRG 244
+ D P LVL+PTRELAQQIE EVK S + +K+ + GG + EQ RG
Sbjct: 154 EKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRG 211
Query: 245 GVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQT 303
GV IV+ATPGR D G SL+ V++V+LDEADRMLDMGFE IR ++ + PD+
Sbjct: 212 GVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDR-LV 270
Query: 304 LLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTA-NVIQILEKVSENEKVDRXXXXXXX 362
L SAT P + L +Y + V G + + +V Q E V + + R
Sbjct: 271 ALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFEFVPHDSRFLRVCEIVNF 330
Query: 363 XXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRN 422
++ + + I+FV+ K D +S +G+++ LHGGR+QSDRE +L R+
Sbjct: 331 LTAAHGQN---YKM-IIFVKSKVMADHLSSDFCMKGINSQGLHGGRSQSDREMSLNMLRS 386
Query: 423 GSTNILVATDVASRGLDVMGVAHVVNLDLP 452
G ILVATD+ASRG+DV + HV+N D P
Sbjct: 387 GEVQILVATDLASRGIDVPDITHVLNYDFP 416
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 144/364 (39%), Positives = 207/364 (56%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
++ V + P PI F+D+ LH I ++I+ Y RPT +Q ++P GRDL+ CA
Sbjct: 216 EIPVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCA 275
Query: 166 ETGSGKTAAFTIPMIQHCVAQTP------VGRGDG-----PLALVLAPTRELAQQIEKEV 214
+TGSGKTAAF +P++ + P V G P ALVL+PTREL+ QI E
Sbjct: 276 QTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNES 335
Query: 215 KALSRSLDSFKTAIVVGGT-NIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFV 273
+ + +A++ GG N +Q +LR G I++ATPGR +D + QG + ++
Sbjct: 336 RKFAYRTP-ITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYL 394
Query: 274 ILDEADRMLDMGFEPQIREVMQ--NLPDKHQ--TLLFSATMPVEIEALAQEYLTDP-VQV 328
+LDEADRMLDMGFEPQIR++++ +P K + T +FSAT P EI+ LAQ++L + V +
Sbjct: 395 VLDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSATFPKEIQLLAQDFLKENYVFL 454
Query: 329 KVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCD 388
VG+V S + N++Q + V E+EK R LT+VFVE K
Sbjct: 455 AVGRVGSTSENIMQKIVWVEEDEK--RSYLMDLLDATGDSS------LTLVFVETKRGAS 506
Query: 389 EVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVN 448
+++ L + V +HG Q +RE L FR G+ ILVAT VA+RGLD+ V HV+N
Sbjct: 507 DLAYYLNRQNYEVVTIHGDLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPNVKHVIN 566
Query: 449 LDLP 452
DLP
Sbjct: 567 YDLP 570
>UNIPROTKB|G3X7G8 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:DAAA02043967 EMBL:DAAA02043968
RefSeq:NP_001179318.1 UniGene:Bt.41740 Ensembl:ENSBTAT00000027398
GeneID:514901 KEGG:bta:514901 NextBio:20871562 Uniprot:G3X7G8
Length = 620
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 143/367 (38%), Positives = 211/367 (57%)
Query: 88 VLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIM-KDIEFHEYTRPTS 146
V +QIE +R +L + TV VP P I F + C P + ++++ Y PT
Sbjct: 175 VSHLREDQIENLRRQLGI--TVRGRGVPRP--IVDF-EHCGFPEALNRNLKASGYEVPTP 229
Query: 147 IQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTREL 206
IQ Q +PV L GRD+L A+TGSGKTAAF +P+I ++Q+ P LVL PTREL
Sbjct: 230 IQMQMIPVGLLGRDVLASADTGSGKTAAFLLPVILRALSQSK-----SPSGLVLTPTREL 284
Query: 207 AQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTS 266
A QIE++ K L L +TA++VGG QR LR + +++ATPGR LD ++Q +
Sbjct: 285 AIQIERQAKELMSGLPCLRTALLVGGLPAPPQRHRLRQRIQVIIATPGRLLDIIKQRSVE 344
Query: 267 LSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSATMPVEIEALAQEYLTDPV 326
L + V++DEAD ML MGF+ Q+ +V++ LP QT+L SAT+P +E LA + L DPV
Sbjct: 345 LGSIKIVVVDEADTMLKMGFQQQVLDVLEQLPHDCQTVLASATIPASVEQLACQLLRDPV 404
Query: 327 QVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTR 386
+ G+ + P +V QI+ V E K + K P P+ +VFV+ K
Sbjct: 405 AITAGERNLPCPSVRQIVLWVEEPAKKKKLFEILNDK-----KLFKP-PV-LVFVDCKLG 457
Query: 387 CDEVSEALVA-EGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAH 445
D +SEA+ GL + ++H + Q +R++ L+ G +++V+T V RGLD++GV
Sbjct: 458 ADLLSEAVQKITGLKSTSVHSDKTQMERKNILKGLLEGDYDVVVSTGVLGRGLDLVGVKL 517
Query: 446 VVNLDLP 452
VVN D+P
Sbjct: 518 VVNFDMP 524
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 149/396 (37%), Positives = 219/396 (55%)
Query: 66 RRSYAS-HPVPQPVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFT 124
+R +A P+ + ++ K + + E + + D P P P +F
Sbjct: 144 KRKWADLPPIKKNLYIESKATHSLSEAQVEIWRKENFNIRCDDLTEGEKRPIPKPTCTFE 203
Query: 125 DMCL-HPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHC 183
D +P IM+ I + +PT IQ+Q+ P+ L G DL+G A+TG+GKT ++ +P H
Sbjct: 204 DAFQQYPEIMQSIRRAGFQKPTPIQSQSWPIILQGIDLIGIAQTGTGKTLSYLMPGFIHI 263
Query: 184 VAQTPVGRG--DGPLALVLAPTRELAQQIEKEV-KALSRSLDSFKTAIVVGGTNIAEQRS 240
+Q PV R +GP LVL PTRELA Q+E E K L + L K+ + GG N Q
Sbjct: 264 HSQ-PVSRKQRNGPGMLVLTPTRELALQVEAECSKYLYKGL---KSVCIYGGGNRKGQIQ 319
Query: 241 ELRGGVSIVVATPGRFLDHLQQGN-TSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-P 298
++ GV I++ATPGR L+ LQ N +L +++++LDEAD+MLD+GFE QI +++ ++ P
Sbjct: 320 DVTKGVDIIIATPGR-LNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRP 378
Query: 299 DKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVI-QILEKVSENEKVDRXX 357
D+ QT++ +A+ P LAQ YL P+ V VG + T N + Q + +E EK
Sbjct: 379 DR-QTVMTTASWPDSTRRLAQSYLKQPMIVYVGTLDLVTVNTVKQNIIVTTEEEK----- 432
Query: 358 XXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESAL 417
+S P IVFV RK D++S L +G+ +LHG R QSDR+ AL
Sbjct: 433 ---RSLVKEFLQSLSPKDKVIVFVSRKLVADDLSSDLSIQGIPVQSLHGDREQSDRDQAL 489
Query: 418 RDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
DFR G IL+ATD+A+RGLDV V HV N + P+
Sbjct: 490 EDFRTGRVKILIATDLAARGLDVSDVTHVYNYNFPR 525
>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490
ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
Uniprot:F1QQ09
Length = 473
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 140/382 (36%), Positives = 212/382 (55%)
Query: 81 NWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHE 140
+W +L + E VR + ++ V G PAPI+SF +M +I+K ++
Sbjct: 1 SWNAPRYILSMPAVRHERVRKKYHILVE-GEG---IPAPIKSFREMKFPQAILKGLKKKG 56
Query: 141 YTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT---PVGRGDGPLA 197
PT IQ Q +P LSGRD++G A TGSGKT FT+P+I C+ Q P + +GP
Sbjct: 57 IVHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEKRLPFCKREGPYG 116
Query: 198 LVLAPTRELAQQ-----IEKEVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVA 251
L++ P+ +A+ IE K L + A+ +GG ++ EQ ++ +A
Sbjct: 117 LIICPSVNVAKHTHHGIIEYYCKLLEDEGAPQMRCALCIGGMSVKEQMEVVK------LA 170
Query: 252 TPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSATMP 311
TPGR +D L + SL ++ LDEADRM+DMGFE IR + + QTLLFSATMP
Sbjct: 171 TPGRLMDLLNKKMVSLDICRYLALDEADRMIDMGFEEDIRTIFSYFKGQRQTLLFSATMP 230
Query: 312 VEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSC 371
+I+ A+ L P+ + VG+ + + +VIQ +E V E K+ K+
Sbjct: 231 KKIQNFAKSALVKPITINVGRAGAASLDVIQEVEYVKEEAKM-------VYLLECLQKT- 282
Query: 372 HPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVAT 431
P P+ ++F E+K D + E L+ +G+ AVA+HGG++Q +R A+ F+ G ++LVAT
Sbjct: 283 -PPPV-LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVAT 340
Query: 432 DVASRGLDVMGVAHVVNLDLPK 453
DVAS+GLD + HVVN D+P+
Sbjct: 341 DVASKGLDFPAIQHVVNYDMPE 362
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 134/338 (39%), Positives = 188/338 (55%)
Query: 115 PAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAA 174
PA A +F D+ +HP +++ I Y PT+IQA +P ++G D++G A+TG+GKTAA
Sbjct: 8 PA-ASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAA 66
Query: 175 FTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTN 234
F IPM+ + V P ALVL PTRELA Q+ + L + GG++
Sbjct: 67 FAIPMLSKIDITSKV-----PQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSS 121
Query: 235 IAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVM 294
A Q + LR G +VV TPGR +DHL++ LSRV F++LDEAD ML MGF + ++
Sbjct: 122 YAVQLAGLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERIL 181
Query: 295 QNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVD 354
P+ Q LFSATMP I L+ +YL DP +V ++ N+ Q +V+ K+D
Sbjct: 182 SETPEYKQVALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVAR--KMD 239
Query: 355 RXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRE 414
PF IVFV K +E++E L A G A A+ G Q+ RE
Sbjct: 240 ALTRVL---------EVEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRE 290
Query: 415 SALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+ R+G +ILVATDVA+RGLDV ++HV+N D+P
Sbjct: 291 RTITALRDGDIDILVATDVAARGLDVERISHVLNYDIP 328
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 139/340 (40%), Positives = 194/340 (57%)
Query: 117 PAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFT 176
P P + FTD P + + I F +T PT IQ Q+ P+ L G DL+G A TGSGKT AF
Sbjct: 108 PNPFQKFTDYEF-PRMFQHI-FQGFTAPTVIQGQSWPIILGGNDLVGLAATGSGKTLAFL 165
Query: 177 IPMIQHCVA--QTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTN 234
+P + ++ + P G PL LV+APTRELAQQIE+ K R S + GG
Sbjct: 166 LPALLKIISLPKRP-SYGATPLVLVMAPTRELAQQIEEVCKTSIRGT-SIRQLCAYGGLG 223
Query: 235 IAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVM 294
+Q LR GV IV+ TPGR D L++ + LS V +++LDEADRMLDMGF PQI ++
Sbjct: 224 KIDQSRILRNGVDIVIGTPGRLNDLLRKHH--LSSVQYLVLDEADRMLDMGFMPQIESLI 281
Query: 295 QNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVS-SPTANVIQILEKVSENEKV 353
+P + QTL+FSAT P E++ LA ++L DP+++ VG + + NV Q + V+ ++
Sbjct: 282 DQIPKERQTLMFSATWPKEVKLLASKFLKDPIKITVGSQELTGSINVTQHI--VNIDDLS 339
Query: 354 DRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAE-GLHAVALHGGRNQSD 412
D + P IVF K +CD+ L + + ++ LH G++Q
Sbjct: 340 DLQSDDLIYDEINKILTADPTNTVIVFCNEKYKCDDFQHYLSTQKNVKSIVLHSGKDQRM 399
Query: 413 RESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
RES L+ FR+ IL+ATDVA+RGLD+ V V N LP
Sbjct: 400 RESGLKLFRDHRIRILIATDVAARGLDIPSVKAVFNYRLP 439
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 132/332 (39%), Positives = 192/332 (57%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F D L + K I+ + T IQAQ +P+ L+ +D++G A+TG+GKTAAF IP+++
Sbjct: 4 TFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
++P A+V+APTRELA Q+ +E+ + + + + + GG +I Q
Sbjct: 64 KINPESP-----NIQAIVIAPTRELAIQVSEELYKIGQDKRA-RVLPIYGGQDIGRQIRA 117
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L+ I+V TPGR LDH+ + L V+ V+LDEAD ML+MGF I ++ N+P +H
Sbjct: 118 LKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEH 177
Query: 302 QTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXX 361
QTLLFSATMP I+ +A+ ++T+P VKV +N+ Q +V E +K D
Sbjct: 178 QTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLLD 237
Query: 362 XXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFR 421
P L IVF K R DE++EAL G A +HG Q+ R ALR F+
Sbjct: 238 IQS--------P-ELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFK 288
Query: 422 NGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
G+ +LVATDVA+RGLD+ GV HV N D+P+
Sbjct: 289 QGAIEVLVATDVAARGLDISGVTHVYNFDVPQ 320
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 128/331 (38%), Positives = 191/331 (57%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
SF P++M + Y PT IQAQA+P L G D++G A+TG+GKTAA+ +P+IQ
Sbjct: 2 SFESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVIQ 61
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
++ TP GR LVLAPTRELA QI + ++L + + + GG N+ +Q
Sbjct: 62 KMLS-TPRGR---VRTLVLAPTRELACQIAESFRSLGQRA-RIRECSIYGGVNMDQQIRR 116
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
LR GV +VVA PGR LDH+ +G + V +I+DEADRM DMGF+P I+ +++ L H
Sbjct: 117 LRSGVDVVVACPGRLLDHIWRGTIDICGVETLIIDEADRMFDMGFQPDIQSILKCLVQPH 176
Query: 302 QTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXX 361
QTLLFSATMP E+ L E T+PV +++G +P ++V + V ++K
Sbjct: 177 QTLLFSATMPPEVRKLTLETQTNPVTIQIG-TQAPASSVSHSVYPVKNHQKTP---LLIE 232
Query: 362 XXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFR 421
KS ++F K + +++ + G +L G +Q+ R + + FR
Sbjct: 233 ILKTTETKS------VLIFARTKYGAENLADEISRAGFTTASLQGNLSQNRRHAVMEGFR 286
Query: 422 NGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
G+ ILVATD+A+RGLD+ ++HV+N D+P
Sbjct: 287 RGNFKILVATDIAARGLDIDHISHVINYDMP 317
>UNIPROTKB|B7Z5N6 [details] [associations]
symbol:DDX59 "cDNA FLJ56549, highly similar to Homo sapiens
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (DDX59), transcript
variant 2, mRNA" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL445483 UniGene:Hs.497332 HGNC:HGNC:25360
HOGENOM:HOG000006599 HOVERGEN:HBG106120 OrthoDB:EOG4K9BBZ
EMBL:AK299219 IPI:IPI00514037 SMR:B7Z5N6 Ensembl:ENST00000367348
UCSC:uc010ppl.1 Uniprot:B7Z5N6
Length = 567
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 138/373 (36%), Positives = 215/373 (57%)
Query: 82 WKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMK-DIEFHE 140
+K +L +QIE ++ +L + + G PI F + C P ++ +++
Sbjct: 168 YKEHPFILNLQEDQIENLKQQLGI---LVQGQ-EVTRPIIDF-EHCSLPEVLNHNLKKSG 222
Query: 141 YTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVL 200
Y PT IQ Q +PV L GRD+L A+TGSGKTAAF +P+I + ++ P AL+L
Sbjct: 223 YEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALFESKT-----PSALIL 277
Query: 201 APTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHL 260
PTRELA QIE++ K L L KT ++VGG + Q L+ V +++ATPGR LD +
Sbjct: 278 TPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDII 337
Query: 261 QQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSATMPVEIEALAQE 320
+Q + L V V++DEAD ML MGF+ Q+ ++++N+P+ QT+L SAT+P IE LA +
Sbjct: 338 KQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQ 397
Query: 321 YLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVF 380
L +PV++ G+ + P ANV QI+ V + K + K P P+ +VF
Sbjct: 398 LLHNPVRIITGEKNLPCANVRQIILWVEDPAKKKKLFEILNDK-----KLFKP-PV-LVF 450
Query: 381 VERKTRCDEVSEALVA-EGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLD 439
V+ K D +SEA+ GL ++++H ++Q +R++ L+ G ++V+T V RGLD
Sbjct: 451 VDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILKGLLEGDYEVVVSTGVLGRGLD 510
Query: 440 VMGVAHVVNLDLP 452
++ V VVN D+P
Sbjct: 511 LISVRLVVNFDMP 523
>UNIPROTKB|Q5T1V6 [details] [associations]
symbol:DDX59 "Probable ATP-dependent RNA helicase DDX59"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL136611 EMBL:AL445483 EMBL:BC014183 EMBL:BC041801
IPI:IPI00010449 IPI:IPI00217157 RefSeq:NP_001026895.2
UniGene:Hs.497332 PDB:2YQP PDBsum:2YQP ProteinModelPortal:Q5T1V6
SMR:Q5T1V6 PhosphoSite:Q5T1V6 DMDM:74762230 PaxDb:Q5T1V6
PRIDE:Q5T1V6 DNASU:83479 Ensembl:ENST00000331314
Ensembl:ENST00000447706 GeneID:83479 KEGG:hsa:83479 UCSC:uc009wzk.3
CTD:83479 GeneCards:GC01M200594 HGNC:HGNC:25360 HPA:HPA047166
neXtProt:NX_Q5T1V6 PharmGKB:PA142672000 HOGENOM:HOG000006599
HOVERGEN:HBG106120 InParanoid:Q5T1V6 OMA:VTRPIID PhylomeDB:Q5T1V6
EvolutionaryTrace:Q5T1V6 GenomeRNAi:83479 NextBio:72419
ArrayExpress:Q5T1V6 Bgee:Q5T1V6 CleanEx:HS_DDX59
Genevestigator:Q5T1V6 Uniprot:Q5T1V6
Length = 619
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 138/373 (36%), Positives = 215/373 (57%)
Query: 82 WKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMK-DIEFHE 140
+K +L +QIE ++ +L + + G PI F + C P ++ +++
Sbjct: 168 YKEHPFILNLQEDQIENLKQQLGI---LVQGQ-EVTRPIIDF-EHCSLPEVLNHNLKKSG 222
Query: 141 YTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVL 200
Y PT IQ Q +PV L GRD+L A+TGSGKTAAF +P+I + ++ P AL+L
Sbjct: 223 YEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALFESKT-----PSALIL 277
Query: 201 APTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHL 260
PTRELA QIE++ K L L KT ++VGG + Q L+ V +++ATPGR LD +
Sbjct: 278 TPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDII 337
Query: 261 QQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSATMPVEIEALAQE 320
+Q + L V V++DEAD ML MGF+ Q+ ++++N+P+ QT+L SAT+P IE LA +
Sbjct: 338 KQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQ 397
Query: 321 YLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVF 380
L +PV++ G+ + P ANV QI+ V + K + K P P+ +VF
Sbjct: 398 LLHNPVRIITGEKNLPCANVRQIILWVEDPAKKKKLFEILNDK-----KLFKP-PV-LVF 450
Query: 381 VERKTRCDEVSEALVA-EGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLD 439
V+ K D +SEA+ GL ++++H ++Q +R++ L+ G ++V+T V RGLD
Sbjct: 451 VDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILKGLLEGDYEVVVSTGVLGRGLD 510
Query: 440 VMGVAHVVNLDLP 452
++ V VVN D+P
Sbjct: 511 LISVRLVVNFDMP 523
>UNIPROTKB|F1S0I6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
Length = 650
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 143/348 (41%), Positives = 199/348 (57%)
Query: 115 PAPAPIESFTD--MCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKT 172
P P P F D C +P +M +I+ + +PT IQ+QA P+ L G DL+G A+TG+GKT
Sbjct: 234 PIPNPACKFEDAFQC-YPEVMINIKKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKT 292
Query: 173 AAFTIPMIQHCVAQTPV---GRG-DGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAI 228
++ +P H +Q V R +GP LVL PTRELA Q+E E S K+
Sbjct: 293 LSYLMPGFIHVDSQPVVFSLQRARNGPGMLVLTPTRELALQVEAECSKYSYK--GLKSVC 350
Query: 229 VVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGN-TSLSRVSFVILDEADRMLDMGFE 287
V GG + Q +L GV I++ATPGR L+ LQ N L +S+++LDEAD+MLDMGFE
Sbjct: 351 VYGGGDRDGQIKDLLKGVDIIIATPGR-LNDLQMNNFVYLKSISYLVLDEADKMLDMGFE 409
Query: 288 PQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVI-QILE 345
PQI +++ ++ PD+ QT++ SAT P + LAQ YL +P+ V VG + + + Q +
Sbjct: 410 PQIMKILLDIRPDR-QTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNII 468
Query: 346 KVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALH 405
+E+EK +S P I+FV RK D +S L + +LH
Sbjct: 469 VTTEDEK--------RSHIQTFIESMSPKDKVIIFVSRKAVADHLSSDLGIRHISVESLH 520
Query: 406 GGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
G R Q DRE AL++F+ G IL+ATD+ASRGLDV V HV N D P+
Sbjct: 521 GNREQGDRERALKNFKTGKVRILIATDLASRGLDVHDVTHVYNYDFPR 568
>UNIPROTKB|I3LV06 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:FP312674 RefSeq:XP_003357711.1
Ensembl:ENSSSCT00000031167 GeneID:100621580 KEGG:ssc:100621580
Uniprot:I3LV06
Length = 607
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 148/386 (38%), Positives = 213/386 (55%)
Query: 70 ASHP-VPQPVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCL 128
+S P P P + + +QIE +R +L + V G P PI F C
Sbjct: 143 SSEPGAPCPASYVYTEHAFISNLREDQIENLRGQLGI---VVEGR-GVPRPIIDFGH-CG 197
Query: 129 HPSIMK-DIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT 187
P + +++ Y PT IQ Q +PV L GRDLL A+TGSGKTAAF +P+I + Q+
Sbjct: 198 FPETLNFNLKTAGYEVPTPIQMQMIPVGLLGRDLLASADTGSGKTAAFLLPVITRALVQS 257
Query: 188 PVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVS 247
P ALVL PTRELA QIE++ K L L +TA++VGG Q LR V
Sbjct: 258 KA-----PSALVLTPTRELAIQIERQAKELMGGLPRMRTALLVGGLPAPPQLHRLRQRVQ 312
Query: 248 IVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFS 307
+++ATPGR LD ++Q + L + V++DEAD ML MGF+ Q+ +V++N+P QT+L S
Sbjct: 313 VIIATPGRLLDIMKQSSVDLGNIKIVVVDEADTMLKMGFQEQVLDVLENVPQDCQTILVS 372
Query: 308 ATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXX 367
AT+P IE LA L DPV+V G+ + P +V QI+ V E K +
Sbjct: 373 ATIPTRIEQLASRLLHDPVRVLAGEKNLPCPSVRQIVLWVEEPAKKKKLFEILNDK---- 428
Query: 368 XKSCHPFPLTIVFVERKTRCDEVSEALVA-EGLHAVALHGGRNQSDRESALRDFRNGSTN 426
K P P+ +VFV+ K D +SEA+ GL + ++H ++Q +R++ L G +
Sbjct: 429 -KLFKP-PV-LVFVDCKLGADLLSEAVEKITGLKSTSMHSEKSQIERKTILEGLLEGDYD 485
Query: 427 ILVATDVASRGLDVMGVAHVVNLDLP 452
++V+T V RGLD++ V VVN D+P
Sbjct: 486 VVVSTGVLGRGLDLISVKLVVNFDMP 511
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 138/357 (38%), Positives = 204/357 (57%)
Query: 106 DVTV-ASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGC 164
D+ V SGS P P I +F + L S+ K++ Y +PT +Q +P+ +GRDL+ C
Sbjct: 262 DILVDVSGSNP-PKAIMTFEEAGLCDSLSKNVSKSGYVKPTPVQKHGIPIISAGRDLMAC 320
Query: 165 AETGSGKTAAFTIPMIQHC----VAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRS 220
A+TGSGKTAAF +P++Q VA + P A+++APTREL QI E + +
Sbjct: 321 AQTGSGKTAAFLLPILQRFMTDGVAASKFSEIQEPEAIIVAPTRELINQIYLEARKFAYG 380
Query: 221 LDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADR 280
+ +V GG N E+ G +++ ATPGR D + +G LS+V +++LDEADR
Sbjct: 381 T-CVRPVVVYGGINTGYTIREVLKGCNVLCATPGRLHDLIGRGKIGLSKVRYLVLDEADR 439
Query: 281 MLDMGFEPQIREVMQN--LPDKH--QTLLFSATMPVEIEALAQEYL-TDPVQVKVGKVSS 335
MLDMGFEP++R+++ + +P K QTL+FSAT P +I+ +A ++L D + + VG V
Sbjct: 440 MLDMGFEPEMRKLVASPGMPSKEERQTLMFSATYPEDIQRMAADFLKVDYIFLAVGVVGG 499
Query: 336 PTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALV 395
++V Q + +V + K D+ T+VFVE K D ++ L
Sbjct: 500 ACSDVEQTVVQVDQYSKRDQLLELLRATGNER---------TMVFVETKRSADFIATFLC 550
Query: 396 AEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
E + ++HG R Q +RE AL DFR G +LVAT VA+RGLD+ V HVVN D+P
Sbjct: 551 QEKISTTSIHGDREQREREKALSDFRLGHCPVLVATSVAARGLDIEQVQHVVNFDMP 607
>UNIPROTKB|E2R4Z9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
Length = 569
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 145/417 (34%), Positives = 229/417 (54%)
Query: 82 WKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMK-DIEFHE 140
+K +L +QIE ++ +L + V G PI F + C P + +++
Sbjct: 169 YKEHPFILNLQEDQIENLKRQLGI---VVQGQ-DVTRPIIDF-EHCGFPEALNHNLKTSG 223
Query: 141 YTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVL 200
Y PT IQ Q +PV L GRD+L A+TGSGKTAAF +P+I + ++ P AL+L
Sbjct: 224 YEVPTPIQMQMIPVGLLGRDVLASADTGSGKTAAFLLPVITRALCESKT-----PSALIL 278
Query: 201 APTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHL 260
PTRELA QIE + K L L KT ++VGG + Q LR V +++ATPGR LD +
Sbjct: 279 TPTRELAIQIENQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDII 338
Query: 261 QQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSATMPVEIEALAQE 320
+Q + L + V++DEAD ML MGF+ Q+ ++++++P+ QT+L SAT+P IE LA +
Sbjct: 339 KQSSVELCGIKIVVVDEADTMLKMGFQQQVLDILEHVPNDSQTILVSATIPTSIEQLASQ 398
Query: 321 YLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVF 380
L +PV++ G+ + P ++V QI+ V E K + K P P+ +VF
Sbjct: 399 LLHNPVRIITGEKNLPCSSVRQIILWVEEPAKKKKLFEILNDK-----KLFKP-PV-LVF 451
Query: 381 VERKTRCDEVSEALVA-EGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLD 439
V+ K D +SEA+ GL +V++H ++Q++R++ L+ G ++V+T V RGLD
Sbjct: 452 VDCKLGADLLSEAVQKITGLKSVSIHSEKSQTERKNILKGLLEGDYEVVVSTGVLGRGLD 511
Query: 440 VMGVAHVVNLDLPKVLLAASESLCTTS--FNITTNLDGDMKKLEFCLILAITVLLFV 494
++ V VVN D+P + + T F L + + C L++ +LF+
Sbjct: 512 LISVRLVVNFDMPSSMDEYVHQVRTHIWIFGFLGILSSSLLHILICSRLSLIKVLFL 568
>UNIPROTKB|E2R4Y9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
Length = 623
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 138/373 (36%), Positives = 214/373 (57%)
Query: 82 WKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMK-DIEFHE 140
+K +L +QIE ++ +L + V G PI F + C P + +++
Sbjct: 169 YKEHPFILNLQEDQIENLKRQLGI---VVQGQ-DVTRPIIDF-EHCGFPEALNHNLKTSG 223
Query: 141 YTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVL 200
Y PT IQ Q +PV L GRD+L A+TGSGKTAAF +P+I + ++ P AL+L
Sbjct: 224 YEVPTPIQMQMIPVGLLGRDVLASADTGSGKTAAFLLPVITRALCESKT-----PSALIL 278
Query: 201 APTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHL 260
PTRELA QIE + K L L KT ++VGG + Q LR V +++ATPGR LD +
Sbjct: 279 TPTRELAIQIENQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDII 338
Query: 261 QQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSATMPVEIEALAQE 320
+Q + L + V++DEAD ML MGF+ Q+ ++++++P+ QT+L SAT+P IE LA +
Sbjct: 339 KQSSVELCGIKIVVVDEADTMLKMGFQQQVLDILEHVPNDSQTILVSATIPTSIEQLASQ 398
Query: 321 YLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVF 380
L +PV++ G+ + P ++V QI+ V E K + K P P+ +VF
Sbjct: 399 LLHNPVRIITGEKNLPCSSVRQIILWVEEPAKKKKLFEILNDK-----KLFKP-PV-LVF 451
Query: 381 VERKTRCDEVSEALVA-EGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLD 439
V+ K D +SEA+ GL +V++H ++Q++R++ L+ G ++V+T V RGLD
Sbjct: 452 VDCKLGADLLSEAVQKITGLKSVSIHSEKSQTERKNILKGLLEGDYEVVVSTGVLGRGLD 511
Query: 440 VMGVAHVVNLDLP 452
++ V VVN D+P
Sbjct: 512 LISVRLVVNFDMP 524
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 134/334 (40%), Positives = 194/334 (58%)
Query: 123 FTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQH 182
FTD+ L +++K + Y P+ IQAQA+P +SGRD++ A+TG+GKTA FT+P++Q
Sbjct: 8 FTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLLQR 67
Query: 183 CVAQ--TPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRS 240
+ V + AL+L PTRELA QI + ++ + L+ + +V GG I Q +
Sbjct: 68 LSSSKGNKVS-SNNVRALILTPTRELAAQISESIEVYGKYLN-LHSMVVFGGVKINPQIA 125
Query: 241 ELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDK 300
LR GV ++VATPGR LD Q S++ ILDEADRMLDMGF I+++M LP
Sbjct: 126 RLRQGVDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMGFIRDIKKLMTALPKD 185
Query: 301 HQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXX 360
Q LLFSAT EI ALA+ + +P+++ V +S V Q L V + K
Sbjct: 186 RQNLLFSATFSPEIRALAKGMVNNPLEISVDAENSTAEKVTQWLTAVDKKRKP------- 238
Query: 361 XXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDF 420
K + + +VF + K +++++ L AEGL A A+HG ++Q R AL F
Sbjct: 239 -AVLTHLIKE-NNWQQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAAF 296
Query: 421 RNGSTNILVATDVASRGLDVMGVAHVVNLDLPKV 454
++GS ILVATD+A+RG+D+ + VVN DLP V
Sbjct: 297 KDGSVKILVATDIAARGIDIDLLPQVVNFDLPNV 330
>ZFIN|ZDB-GENE-050208-665 [details] [associations]
symbol:ddx59 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-050208-665 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:BX649292
IPI:IPI00786758 Ensembl:ENSDART00000105600 Bgee:F1R8P9
Uniprot:F1R8P9
Length = 584
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 132/374 (35%), Positives = 211/374 (56%)
Query: 81 NWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIM-KDIEFH 139
++K + EQIE V+ L + V+ G+ P+ F C P+++ ++++
Sbjct: 134 SYKQDAFISELTEEQIERVKAELGI---VSVGTEVC-RPVIEFQH-CRFPTVLERNLKAA 188
Query: 140 EYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALV 199
Y PT +Q Q +PV L+GRD++ A+TGSGKT AF +P++ + Q+ P L+
Sbjct: 189 GYEAPTPVQMQMVPVGLTGRDVIATADTGSGKTVAFLLPVVMRAL-QSESASPSCPACLI 247
Query: 200 LAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDH 259
L PTRELA QIE++ K L R L + +TA++VGG + Q L+ + IV+ TPGR L+
Sbjct: 248 LTPTRELAIQIEEQAKELMRGLPNMRTALLVGGMPLPPQLHRLKHNIKIVIGTPGRLLEI 307
Query: 260 LQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSATMPVEIEALAQ 319
L+Q L V V++DEAD ML MGF+ Q+ ++++ +P+ HQTLL SAT+P + LA+
Sbjct: 308 LKQKAVQLDHVRTVVVDEADTMLKMGFQQQVLDILEQVPEDHQTLLTSATIPTGTQQLAE 367
Query: 320 EYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIV 379
DPV + +G+ + P ANV QI+ V E K + K P P+ +V
Sbjct: 368 RLTHDPVTITIGQKNQPCANVRQIVLWVEEPSKKKKLFEILNDE-----KLYQP-PV-VV 420
Query: 380 FVERKTRCDEVSEALV-AEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGL 438
FV+ K D + EA+ L+ VA+H + Q +R ++ G +++++T + RGL
Sbjct: 421 FVDCKLGADLLCEAVQKVMSLNTVAIHSDKMQWERNKIVKGLLEGQFDVVISTGILGRGL 480
Query: 439 DVMGVAHVVNLDLP 452
D++ V V+N D+P
Sbjct: 481 DLVNVKLVINFDMP 494
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 129/332 (38%), Positives = 188/332 (56%)
Query: 123 FTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQH 182
FT + L I+K IE Y P+ IQ QA+P L+G+D++ A+TG+GKTA FT+P+++
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILE- 61
Query: 183 CVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL 242
+A+ P R + AL+L PTRELA QI+ V R L K+A+V GG I Q +
Sbjct: 62 LLAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRM 120
Query: 243 RGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQ 302
G I+VATPGR +D Q ++ ++LDEADRMLDMGF I ++++ LP+K Q
Sbjct: 121 CKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQ 180
Query: 303 TLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXX 362
LLFSAT EI LA+ + +PV++ V +S V Q + +K D
Sbjct: 181 NLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLVKE 240
Query: 363 XXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRN 422
+ +VF+ K + ++ L +GL A A+HG ++Q R AL DF+
Sbjct: 241 GN---------WQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKA 291
Query: 423 GSTNILVATDVASRGLDVMGVAHVVNLDLPKV 454
G ILVATD+A+RG+D+ + VVN +LPK+
Sbjct: 292 GEVRILVATDIAARGIDIPQLPQVVNFELPKI 323
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 129/332 (38%), Positives = 188/332 (56%)
Query: 123 FTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQH 182
FT + L I+K IE Y P+ IQ QA+P L+G+D++ A+TG+GKTA FT+P+++
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILE- 61
Query: 183 CVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL 242
+A+ P R + AL+L PTRELA QI+ V R L K+A+V GG I Q +
Sbjct: 62 LLAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRM 120
Query: 243 RGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQ 302
G I+VATPGR +D Q ++ ++LDEADRMLDMGF I ++++ LP+K Q
Sbjct: 121 CKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQ 180
Query: 303 TLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXX 362
LLFSAT EI LA+ + +PV++ V +S V Q + +K D
Sbjct: 181 NLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLVKE 240
Query: 363 XXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRN 422
+ +VF+ K + ++ L +GL A A+HG ++Q R AL DF+
Sbjct: 241 GN---------WQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKA 291
Query: 423 GSTNILVATDVASRGLDVMGVAHVVNLDLPKV 454
G ILVATD+A+RG+D+ + VVN +LPK+
Sbjct: 292 GEVRILVATDIAARGIDIPQLPQVVNFELPKI 323
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 134/355 (37%), Positives = 204/355 (57%)
Query: 101 LRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRD 160
+RL + + G + P P+ SF +M+ I EY +PT IQA A+P ALSGRD
Sbjct: 245 IRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRD 304
Query: 161 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRS 220
+LG A+TGSGKTAA+ P I H + Q + G+GP+A+++ PTRELA Q+ +E K +
Sbjct: 305 VLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCK- 363
Query: 221 LDSFKTAIVVGGTNIAEQRSELRG-GVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEAD 279
+ + GG + EQ +EL+ G +VV TPGR +D ++ G T+ R +F++ DEAD
Sbjct: 364 VYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEAD 423
Query: 280 RMLDMGFEPQIREVMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTA 338
RM DMGFE Q++ + ++ PD+ Q L+FSAT ++E LA++ L DPV++ G+V A
Sbjct: 424 RMFDMGFEAQVKSISDHVRPDR-QCLMFSATFKQKVERLARDALVDPVRIVQGEVGEANA 482
Query: 339 NVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEG 398
++ Q + V +N+ V ++FV +K ++V++ L +
Sbjct: 483 DIEQKVF-VMQNQDVKLHWLIRNLVEFASLGK------VLIFVTKKLDSEDVAKKLKMKD 535
Query: 399 LHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
V LHG Q++R L FR S ILVATDVA+RGLD+ + V+N D+ +
Sbjct: 536 FDIVLLHGDMLQAERNENLLKFRKKS-QILVATDVAARGLDISEIRTVINFDMAR 589
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 133/354 (37%), Positives = 201/354 (56%)
Query: 111 SGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSG 170
SG P PAP+ +F + ++ K+I Y++ T +Q ++PV +GRDL+ CA+TGSG
Sbjct: 158 SGLDP-PAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSCAQTGSG 216
Query: 171 KTAAFTIPMIQHC----VAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKT 226
KTAAF +P++ V + + P +++APTREL QI E + +
Sbjct: 217 KTAAFLLPIVDRMMKDGVTASAFQKQQEPQCIIVAPTRELINQIFLEARKFVYGT-CIRP 275
Query: 227 AIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGF 286
++ GGT ++ G +I+ ATPGR LD +++G SL V +++LDEADRMLDMGF
Sbjct: 276 VVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLDMGF 335
Query: 287 EPQIREVMQ--NLP--DKHQTLLFSATMPVEIEALAQEYL-TDPVQVKVGKVSSPTANVI 341
+++++ +P D+ QTL+FSAT P E++ LA E+L TD + + +G ++V
Sbjct: 336 GLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSDVQ 395
Query: 342 QILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHA 401
Q + +V K D+ T+VFV+ K + D ++ L E L +
Sbjct: 396 QNILQVPRLSKRDKLIEILQSTGGER---------TMVFVDTKKKADYLAAFLCQENLPS 446
Query: 402 VALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVL 455
++HG R Q +RE ALRDFR+G ILVAT VASRGLD+ V HV+N DLP +
Sbjct: 447 TSIHGDREQREREIALRDFRSGKCQILVATSVASRGLDIENVQHVINFDLPNTI 500
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 133/354 (37%), Positives = 201/354 (56%)
Query: 111 SGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSG 170
SG P PAP+ +F + ++ K+I Y++ T +Q ++PV +GRDL+ CA+TGSG
Sbjct: 158 SGLDP-PAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSCAQTGSG 216
Query: 171 KTAAFTIPMIQHC----VAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKT 226
KTAAF +P++ V + + P +++APTREL QI E + +
Sbjct: 217 KTAAFLLPIVDRMMKDGVTASAFQKQQEPQCIIVAPTRELINQIFLEARKFVYGT-CIRP 275
Query: 227 AIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGF 286
++ GGT ++ G +I+ ATPGR LD +++G SL V +++LDEADRMLDMGF
Sbjct: 276 VVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLDMGF 335
Query: 287 EPQIREVMQ--NLP--DKHQTLLFSATMPVEIEALAQEYL-TDPVQVKVGKVSSPTANVI 341
+++++ +P D+ QTL+FSAT P E++ LA E+L TD + + +G ++V
Sbjct: 336 GLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSDVQ 395
Query: 342 QILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHA 401
Q + +V K D+ T+VFV+ K + D ++ L E L +
Sbjct: 396 QNILQVPRLSKRDKLIEILQSTGGER---------TMVFVDTKKKADYLAAFLCQENLPS 446
Query: 402 VALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVL 455
++HG R Q +RE ALRDFR+G ILVAT VASRGLD+ V HV+N DLP +
Sbjct: 447 TSIHGDREQREREIALRDFRSGKCQILVATSVASRGLDIENVQHVINFDLPNTI 500
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 129/331 (38%), Positives = 183/331 (55%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F D L +I+K + YT PT IQ +A+P L G D+ G A+TG+GKTAAF +PMIQ
Sbjct: 5 TFADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMIQ 64
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
T R P L+L PTRELA Q+ + + + L A+++GG + EQ +
Sbjct: 65 RL--STGRARARMPRCLILCPTRELAAQVAENFEKYGKYL-KLTMALLIGGVSFKEQETL 121
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L+ GV +++ATPGR +D +G + V +I+DEADRMLDMGF P I ++ LP
Sbjct: 122 LQRGVDVLIATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKICAKLPANR 181
Query: 302 QTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXX 361
QTLLFSAT P +I+ LA+ + DP +++V + + + Q + K+ N+ R
Sbjct: 182 QTLLFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQFVVKLPTNDGKARRTALRR 241
Query: 362 XXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFR 421
K+ IVF RK D V+ +L G A +HG QS R L+ FR
Sbjct: 242 VIEATNVKN------GIVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRFR 295
Query: 422 NGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+G +LVA+DVA+RGLD+ V HV N P
Sbjct: 296 DGKLKLLVASDVAARGLDIPDVGHVFNFGPP 326
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 133/334 (39%), Positives = 195/334 (58%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F ++ L S+++ +E + T IQA+ +P AL G+D++G A+TG+GKTAAF +P++
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
+G +V+APTRELA Q+ +E+ + + + + GG +I Q
Sbjct: 63 KVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRA 116
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L+ I+V TPGR LDH+ + L V V+LDEAD ML+MGF I ++ ++P+ H
Sbjct: 117 LKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176
Query: 302 QTLLFSATMPVEIEALAQEYLTDP--VQVKVGKVSSPTANVIQILEKVSENEKVDRXXXX 359
QTLLFSATMP I +A+ ++T+P ++VK +V+ P N+ Q +V E +K D
Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP--NIQQFYLEVQEKKKFD----- 229
Query: 360 XXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
+S P L IVF K R DE+SEAL G A +HG Q+ R S LR
Sbjct: 230 -VLTRLLDIQS--P-ELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRK 285
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
F+ GS +LVATDVA+RGLD+ GV HV N D+P+
Sbjct: 286 FKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQ 319
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 133/334 (39%), Positives = 195/334 (58%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F ++ L S+++ +E + T IQA+ +P AL G+D++G A+TG+GKTAAF +P++
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
+G +V+APTRELA Q+ +E+ + + + + GG +I Q
Sbjct: 63 KVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRA 116
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L+ I+V TPGR LDH+ + L V V+LDEAD ML+MGF I ++ ++P+ H
Sbjct: 117 LKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176
Query: 302 QTLLFSATMPVEIEALAQEYLTDP--VQVKVGKVSSPTANVIQILEKVSENEKVDRXXXX 359
QTLLFSATMP I +A+ ++T+P ++VK +V+ P N+ Q +V E +K D
Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP--NIQQFYLEVQEKKKFD----- 229
Query: 360 XXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
+S P L IVF K R DE+SEAL G A +HG Q+ R S LR
Sbjct: 230 -VLTRLLDIQS--P-ELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRK 285
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
F+ GS +LVATDVA+RGLD+ GV HV N D+P+
Sbjct: 286 FKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQ 319
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 133/334 (39%), Positives = 195/334 (58%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F ++ L S+++ +E + T IQA+ +P AL G+D++G A+TG+GKTAAF +P++
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
+G +V+APTRELA Q+ +E+ + + + + GG +I Q
Sbjct: 63 KVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRA 116
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L+ I+V TPGR LDH+ + L V V+LDEAD ML+MGF I ++ ++P+ H
Sbjct: 117 LKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176
Query: 302 QTLLFSATMPVEIEALAQEYLTDP--VQVKVGKVSSPTANVIQILEKVSENEKVDRXXXX 359
QTLLFSATMP I +A+ ++T+P ++VK +V+ P N+ Q +V E +K D
Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP--NIQQFYLEVQEKKKFD----- 229
Query: 360 XXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
+S P L IVF K R DE+SEAL G A +HG Q+ R S LR
Sbjct: 230 -VLTRLLDIQS--P-ELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRK 285
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
F+ GS +LVATDVA+RGLD+ GV HV N D+P+
Sbjct: 286 FKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQ 319
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 133/334 (39%), Positives = 195/334 (58%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F ++ L S+++ +E + T IQA+ +P AL G+D++G A+TG+GKTAAF +P++
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
+G +V+APTRELA Q+ +E+ + + + + GG +I Q
Sbjct: 63 KVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRA 116
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L+ I+V TPGR LDH+ + L V V+LDEAD ML+MGF I ++ ++P+ H
Sbjct: 117 LKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176
Query: 302 QTLLFSATMPVEIEALAQEYLTDP--VQVKVGKVSSPTANVIQILEKVSENEKVDRXXXX 359
QTLLFSATMP I +A+ ++T+P ++VK +V+ P N+ Q +V E +K D
Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP--NIQQFYLEVQEKKKFD----- 229
Query: 360 XXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
+S P L IVF K R DE+SEAL G A +HG Q+ R S LR
Sbjct: 230 -VLTRLLDIQS--P-ELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRK 285
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
F+ GS +LVATDVA+RGLD+ GV HV N D+P+
Sbjct: 286 FKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQ 319
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 133/334 (39%), Positives = 195/334 (58%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F ++ L S+++ +E + T IQA+ +P AL G+D++G A+TG+GKTAAF +P++
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
+G +V+APTRELA Q+ +E+ + + + + GG +I Q
Sbjct: 63 KVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRA 116
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L+ I+V TPGR LDH+ + L V V+LDEAD ML+MGF I ++ ++P+ H
Sbjct: 117 LKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176
Query: 302 QTLLFSATMPVEIEALAQEYLTDP--VQVKVGKVSSPTANVIQILEKVSENEKVDRXXXX 359
QTLLFSATMP I +A+ ++T+P ++VK +V+ P N+ Q +V E +K D
Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP--NIQQFYLEVQEKKKFD----- 229
Query: 360 XXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
+S P L IVF K R DE+SEAL G A +HG Q+ R S LR
Sbjct: 230 -VLTRLLDIQS--P-ELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRK 285
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
F+ GS +LVATDVA+RGLD+ GV HV N D+P+
Sbjct: 286 FKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQ 319
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 133/334 (39%), Positives = 195/334 (58%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F ++ L S+++ +E + T IQA+ +P AL G+D++G A+TG+GKTAAF +P++
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
+G +V+APTRELA Q+ +E+ + + + + GG +I Q
Sbjct: 63 KVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRA 116
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L+ I+V TPGR LDH+ + L V V+LDEAD ML+MGF I ++ ++P+ H
Sbjct: 117 LKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176
Query: 302 QTLLFSATMPVEIEALAQEYLTDP--VQVKVGKVSSPTANVIQILEKVSENEKVDRXXXX 359
QTLLFSATMP I +A+ ++T+P ++VK +V+ P N+ Q +V E +K D
Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP--NIQQFYLEVQEKKKFD----- 229
Query: 360 XXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
+S P L IVF K R DE+SEAL G A +HG Q+ R S LR
Sbjct: 230 -VLTRLLDIQS--P-ELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRK 285
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
F+ GS +LVATDVA+RGLD+ GV HV N D+P+
Sbjct: 286 FKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQ 319
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 133/334 (39%), Positives = 195/334 (58%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F ++ L S+++ +E + T IQA+ +P AL G+D++G A+TG+GKTAAF +P++
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
+G +V+APTRELA Q+ +E+ + + + + GG +I Q
Sbjct: 63 KVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKH-KRVRILPIYGGQDINRQIRA 116
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L+ I+V TPGR LDH+ + L V V+LDEAD ML+MGF I ++ ++P+ H
Sbjct: 117 LKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176
Query: 302 QTLLFSATMPVEIEALAQEYLTDP--VQVKVGKVSSPTANVIQILEKVSENEKVDRXXXX 359
QTLLFSATMP I +A+ ++T+P ++VK +V+ P N+ Q +V E +K D
Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP--NIQQFYLEVQEKKKFD----- 229
Query: 360 XXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
+S P L IVF K R DE+SEAL G A +HG Q+ R S LR
Sbjct: 230 -VLTRLLDIQS--P-ELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRK 285
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
F+ GS +LVATDVA+RGLD+ GV HV N D+P+
Sbjct: 286 FKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQ 319
>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
symbol:PFL1310c "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
Uniprot:Q8I5E7
Length = 742
Score = 433 (157.5 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 95/266 (35%), Positives = 152/266 (57%)
Query: 191 RGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVV 250
R L+L PTREL Q+ E+K+ ++L K+ V GG Q + L+ G I+V
Sbjct: 424 RASDTYGLILLPTRELCLQVLDEIKSFEKNLP-IKSVAVYGGVPKYYQINNLKKGADIIV 482
Query: 251 ATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSATM 310
ATPGR LD L+ GN +L + +V++DEADR+LDMGFE Q+R++M + Q L +AT
Sbjct: 483 ATPGRLLDFLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNKNKQLLFLTATW 542
Query: 311 PVEIEALAQEYLT-DPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXK 369
P ++ LA ++ + DPV++++GK + TAN I + V + +D K
Sbjct: 543 PEQVRKLAYDFCSYDPVKIQIGK-NELTANK-NIEQNVIISSSIDMKKKLLDWL-----K 595
Query: 370 SCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILV 429
+ ++F + K CD + + L +A+++HG + Q +R+ L +++ NILV
Sbjct: 596 ENYENNKILIFCDTKRNCDNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILV 655
Query: 430 ATDVASRGLDVMGVAHVVNLDLPKVL 455
ATDVASRGLD+ ++ V+N D+P +
Sbjct: 656 ATDVASRGLDIKNISVVINYDIPNTI 681
Score = 169 (64.5 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 120 IESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPM 179
I F+D+C H SI+ + ++++ PT+IQ P+ALSG+DL+G AETGSGKT AF +P
Sbjct: 287 INKFSDVCFHESILNYLN-NKFSEPTAIQKITWPIALSGKDLIGVAETGSGKTLAFVLPC 345
Query: 180 IQH 182
H
Sbjct: 346 FMH 348
>UNIPROTKB|E1BXX5 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:AADN02033796 IPI:IPI00587299
RefSeq:XP_422189.2 ProteinModelPortal:E1BXX5
Ensembl:ENSGALT00000003389 GeneID:424346 KEGG:gga:424346
NextBio:20826688 Uniprot:E1BXX5
Length = 625
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 135/373 (36%), Positives = 214/373 (57%)
Query: 82 WKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMK-DIEFHE 140
+K +L EQ+E ++L+L + + G P PI F + C P + +++
Sbjct: 174 YKDHSFILSLQDEQVENLKLQLGIAI---QGQ-QVPRPIIEF-EHCGFPETLNSNLKNSG 228
Query: 141 YTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVL 200
Y PT IQ Q +PV L GRD++ A+TGSGKTAAF +P+I + +T + P AL+L
Sbjct: 229 YEVPTPIQMQMIPVGLLGRDIVASADTGSGKTAAFLLPVIMKVLNET-----ETPSALIL 283
Query: 201 APTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHL 260
APTRELA QIE++ K L L + +T ++VGG + Q L+ V +++ATPGR L+ L
Sbjct: 284 APTRELAIQIERQAKELMAGLPNMRTVLLVGGLPLPPQLHRLKQSVKVIIATPGRLLEIL 343
Query: 261 QQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSATMPVEIEALAQE 320
+Q + L + V++DE D ML MGF+ Q+ ++++++ HQT+L SAT+PV IE LA +
Sbjct: 344 RQSSVQLHGIKIVVVDEVDTMLKMGFQQQVLDILEDISHDHQTILVSATIPVGIEHLANQ 403
Query: 321 YLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVF 380
L + V++ +G+ + P +NV QI+ V E K + K P P+ +VF
Sbjct: 404 LLHNFVRITIGEKNLPCSNVRQIILWVEEPSKKKKLFEILNDK-----KLFKP-PV-LVF 456
Query: 381 VERKTRCDEVSEAL-VAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLD 439
V+ K D +S+A+ GL ++H ++Q +R + L+ ++V+T V RGLD
Sbjct: 457 VDCKLGADLLSDAVHKITGLQCTSMHSEKSQVERTAILQGLLQEKYEVIVSTGVLGRGLD 516
Query: 440 VMGVAHVVNLDLP 452
++ V VVN D+P
Sbjct: 517 LVNVKLVVNFDMP 529
>UNIPROTKB|Q4K4K3 [details] [associations]
symbol:dbpA "ATP-independent RNA helicase DbpA"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 OMA:THEKSTI RefSeq:YP_262830.1
ProteinModelPortal:Q4K4K3 STRING:Q4K4K3 GeneID:3480144
KEGG:pfl:PFL_5772 PATRIC:19881049
BioCyc:PFLU220664:GIX8-5812-MONOMER Uniprot:Q4K4K3
Length = 461
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 133/333 (39%), Positives = 192/333 (57%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F + L P+++ +++ Y + T IQAQ++PV L G DL+ A+TGSGKTAAF I ++
Sbjct: 7 AFNTLPLSPAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIGLLN 66
Query: 182 HCVAQTPVG-RGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRS 240
P+ R G ALV+ PTRELA Q+ KEV+ L+R+ D+ K + GG + Q +
Sbjct: 67 ------PINPRYFGCQALVICPTRELADQVAKEVRRLARAEDNIKVLTLCGGVSFGPQIA 120
Query: 241 ELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDK 300
L G I+V TPGR HL++G+ L ++ ++LDEADRMLDMGF I ++++ P +
Sbjct: 121 SLEHGAHIIVGTPGRIQQHLRKGSLVLDGLNTLVLDEADRMLDMGFYDAIEDIIEKTPSR 180
Query: 301 HQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXX 360
QTLLFSAT PV I+ LA +++ DP VK T QI ++ E +R
Sbjct: 181 RQTLLFSATYPVGIKQLASKFMRDPQTVKAEAFHDDT----QIEQRFYEISPEERMSAVT 236
Query: 361 XXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDF 420
SC F T K + E + L A+G+ AV LHG Q DR+ L F
Sbjct: 237 KVLHHFRPASCVAFCFT------KQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMF 290
Query: 421 RNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
N ST++LVATDVA+RGLD+ + V+N++L +
Sbjct: 291 ANRSTSVLVATDVAARGLDIDALDMVINVELAR 323
>WB|WBGene00001600 [details] [associations]
symbol:glh-3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0043186 "P granule" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA helicase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 134/390 (34%), Positives = 214/390 (54%)
Query: 77 PVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDI 136
PV + + +L+ N + +V + V+ G P +SF+D + S+ +++
Sbjct: 255 PVVDKMEEVFSMLKINAGDFFDKFFDASVQL-VSRGQPVTIQPCKSFSDSDIPQSMRRNV 313
Query: 137 EFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRG-DG- 194
E YTR T IQ +P+ G+D+L CA+TGSGKTAAF +P++ + + + G +G
Sbjct: 314 ERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGG 373
Query: 195 --PLALVLAPTRELAQQIEKEVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVA 251
P ++L PTRELA QI E + S +S+ K V GG N+ +S++ G +I+V
Sbjct: 374 CYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKP--VYGGINVGYNKSQIMKGCTIIVG 431
Query: 252 TPGRFLDHLQQGNTSLSRVSFVILDEADRMLD-MGFEPQIREVM--QNLP--DKHQTLLF 306
T GR + G L + +++LDEADRM+D MGF P+I +++ +N+P DK QT++F
Sbjct: 432 TIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMF 491
Query: 307 SATMPVEIEALAQEYLT-DPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXX-- 363
SAT P ++ A++ L D + + K+ + VIQ E KVD+
Sbjct: 492 SATFPSSVQEAARKLLREDYTMITIDKIGAANKCVIQEFELCDRTSKVDKLLKLLGIDID 551
Query: 364 XXXXXKSCHPF-PLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRN 422
K+ F TIVFV ++ D ++ + A + A+ +HG R Q +R +AL+ FR+
Sbjct: 552 TYTTEKNSDVFVKKTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRS 611
Query: 423 GSTNILVATDVASRGLDVMGVAHVVNLDLP 452
G+ +L+AT V RGLD+ GV HV+N D+P
Sbjct: 612 GAKPVLIATAVVERGLDIKGVDHVINYDMP 641
>UNIPROTKB|O01836 [details] [associations]
symbol:glh-3 "ATP-dependent RNA helicase glh-3"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 134/390 (34%), Positives = 214/390 (54%)
Query: 77 PVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDI 136
PV + + +L+ N + +V + V+ G P +SF+D + S+ +++
Sbjct: 255 PVVDKMEEVFSMLKINAGDFFDKFFDASVQL-VSRGQPVTIQPCKSFSDSDIPQSMRRNV 313
Query: 137 EFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRG-DG- 194
E YTR T IQ +P+ G+D+L CA+TGSGKTAAF +P++ + + + G +G
Sbjct: 314 ERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGG 373
Query: 195 --PLALVLAPTRELAQQIEKEVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVA 251
P ++L PTRELA QI E + S +S+ K V GG N+ +S++ G +I+V
Sbjct: 374 CYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKP--VYGGINVGYNKSQIMKGCTIIVG 431
Query: 252 TPGRFLDHLQQGNTSLSRVSFVILDEADRMLD-MGFEPQIREVM--QNLP--DKHQTLLF 306
T GR + G L + +++LDEADRM+D MGF P+I +++ +N+P DK QT++F
Sbjct: 432 TIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMF 491
Query: 307 SATMPVEIEALAQEYLT-DPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXX-- 363
SAT P ++ A++ L D + + K+ + VIQ E KVD+
Sbjct: 492 SATFPSSVQEAARKLLREDYTMITIDKIGAANKCVIQEFELCDRTSKVDKLLKLLGIDID 551
Query: 364 XXXXXKSCHPF-PLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRN 422
K+ F TIVFV ++ D ++ + A + A+ +HG R Q +R +AL+ FR+
Sbjct: 552 TYTTEKNSDVFVKKTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRS 611
Query: 423 GSTNILVATDVASRGLDVMGVAHVVNLDLP 452
G+ +L+AT V RGLD+ GV HV+N D+P
Sbjct: 612 GAKPVLIATAVVERGLDIKGVDHVINYDMP 641
>MGI|MGI:1915247 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915247
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 GO:GO:0005622
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
GeneTree:ENSGT00610000086076 CTD:83479 HOGENOM:HOG000006599
HOVERGEN:HBG106120 OMA:VTRPIID EMBL:AK004833 EMBL:AK013179
EMBL:AK076462 EMBL:BC023840 IPI:IPI00119928 IPI:IPI00226119
RefSeq:NP_080776.1 UniGene:Mm.385462 UniGene:Mm.486546
ProteinModelPortal:Q9DBN9 SMR:Q9DBN9 PhosphoSite:Q9DBN9
PRIDE:Q9DBN9 Ensembl:ENSMUST00000027655 GeneID:67997 KEGG:mmu:67997
UCSC:uc007cut.1 UCSC:uc007cuu.2 InParanoid:Q9DBN9 OrthoDB:EOG4K9BBZ
ChiTaRS:DDX59 NextBio:326168 Bgee:Q9DBN9 CleanEx:MM_DDX59
Genevestigator:Q9DBN9 Uniprot:Q9DBN9
Length = 619
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 143/386 (37%), Positives = 216/386 (55%)
Query: 70 ASHPV-PQPVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCL 128
A+ P P F +K ++ +QIE ++ +L + V G A PI F + C
Sbjct: 155 AAEPESPLDAFYVYKEHPFIVTLKEDQIETLKQQLGISV---QGQDVA-RPIIDF-EHCG 209
Query: 129 HPSIM-KDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQT 187
P + ++++ Y PT IQ Q +PV L GRD+L A+TGSGKTAAF +P+I ++
Sbjct: 210 FPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIIRAFSED 269
Query: 188 PVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVS 247
P AL+L PTRELA QIE++ K L L KT ++VGG + Q LR V
Sbjct: 270 KT-----PSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVK 324
Query: 248 IVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFS 307
+++ATPGR LD ++Q + SLS + V++DEAD ML MGF+ Q+ +V+++ P QT+L S
Sbjct: 325 VIIATPGRLLDIIKQSSVSLSGIKIVVVDEADTMLKMGFQQQVLDVLEHTPGDCQTILVS 384
Query: 308 ATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXX 367
AT+P IE L + L +PV++ G + P A+V QI+ V + K +
Sbjct: 385 ATIPDSIEQLTDQLLHNPVRIITGDKNLPCASVRQIILWVEDPAKKKKLFEILNDQ---- 440
Query: 368 XKSCHPFPLTIVFVERKTRCDEVSEALVA-EGLHAVALHGGRNQSDRESALRDFRNGSTN 426
K P P+ +VFV+ K D +SEA+ GL++ ++H ++Q +R L+ G
Sbjct: 441 -KLFKP-PV-LVFVDCKLGADLLSEAVQKITGLNSTSIHSEKSQVERRDILKGLLEGDYE 497
Query: 427 ILVATDVASRGLDVMGVAHVVNLDLP 452
++V+T V RGLD++ V VVN D+P
Sbjct: 498 VVVSTGVLGRGLDLVNVKLVVNFDMP 523
>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
symbol:PFE0430w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 577 (208.2 bits), Expect = 1.1e-54, P = 1.1e-54
Identities = 121/339 (35%), Positives = 197/339 (58%)
Query: 117 PAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFT 176
P P++ F L I++ +E + + +IQ Q +P + GRD++ AETGSGKT ++
Sbjct: 719 PRPVQYFYQCGLPSKILQILEKKNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKTLSYL 778
Query: 177 IPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIA 236
P+I+H + Q P+ DGP++++L PTREL+ Q++ E K ++++ + V GG+NIA
Sbjct: 779 FPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNEAKIYCKAVN-IEILAVYGGSNIA 837
Query: 237 EQRSELRGGVSIVVATPGRFLDHLQQGN---TSLSRVSFVILDEADRMLDMGFEPQIREV 293
Q L+ GV I+V TPGR +D L N T+L+RVSFV+LDEADR+LD+GFE QI +
Sbjct: 838 RQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLGFESQIYNI 897
Query: 294 MQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKV 353
++N QT + SAT P I+ +A++ L P+++ VG+ N+ Q +E + E++KV
Sbjct: 898 LRNCRKDKQTAMISATFPNYIQNMAKKLLYKPIEIIVGEKGKTNNNIYQFVEIIEESKKV 957
Query: 354 DRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDR 413
R + L ++FV ++ D + L + + LHGG++Q+DR
Sbjct: 958 FRLLKLLGEWIK--------YGLVLIFVNKQIEADLLYLELYKYDYNLLVLHGGQDQTDR 1009
Query: 414 ESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+ L F+ +L+AT V +RG+D+ + V+N P
Sbjct: 1010 QFTLEKFKKEENKVLIATSVMARGIDIKNIILVINYQCP 1048
>UNIPROTKB|Q8I416 [details] [associations]
symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 577 (208.2 bits), Expect = 1.1e-54, P = 1.1e-54
Identities = 121/339 (35%), Positives = 197/339 (58%)
Query: 117 PAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFT 176
P P++ F L I++ +E + + +IQ Q +P + GRD++ AETGSGKT ++
Sbjct: 719 PRPVQYFYQCGLPSKILQILEKKNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKTLSYL 778
Query: 177 IPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIA 236
P+I+H + Q P+ DGP++++L PTREL+ Q++ E K ++++ + V GG+NIA
Sbjct: 779 FPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNEAKIYCKAVN-IEILAVYGGSNIA 837
Query: 237 EQRSELRGGVSIVVATPGRFLDHLQQGN---TSLSRVSFVILDEADRMLDMGFEPQIREV 293
Q L+ GV I+V TPGR +D L N T+L+RVSFV+LDEADR+LD+GFE QI +
Sbjct: 838 RQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLGFESQIYNI 897
Query: 294 MQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKV 353
++N QT + SAT P I+ +A++ L P+++ VG+ N+ Q +E + E++KV
Sbjct: 898 LRNCRKDKQTAMISATFPNYIQNMAKKLLYKPIEIIVGEKGKTNNNIYQFVEIIEESKKV 957
Query: 354 DRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDR 413
R + L ++FV ++ D + L + + LHGG++Q+DR
Sbjct: 958 FRLLKLLGEWIK--------YGLVLIFVNKQIEADLLYLELYKYDYNLLVLHGGQDQTDR 1009
Query: 414 ESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+ L F+ +L+AT V +RG+D+ + V+N P
Sbjct: 1010 QFTLEKFKKEENKVLIATSVMARGIDIKNIILVINYQCP 1048
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 132/357 (36%), Positives = 209/357 (58%)
Query: 106 DVTV-ASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGC 164
D+ V SGS PA I +F + L S+ K++ Y + T IQ ++P+ ++GRDL+ C
Sbjct: 271 DIVVEVSGSDVPPA-ILTFEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMAC 329
Query: 165 AETGSGKTAAFTIPMIQHCVAQTPVGRG----DGPLALVLAPTRELAQQIEKEVKALSRS 220
A+TGSGKTAAF +P++ H + + P A+++APTREL QI + + S
Sbjct: 330 AQTGSGKTAAFLLPILAHLMVKGVESSAFQTLKEPEAIIVAPTRELINQIYLDARKFSYG 389
Query: 221 LDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADR 280
+ ++ GGT + ++ G +I+ ATPGR LD +++ L+++ +++LDEADR
Sbjct: 390 T-CVRPVVIYGGTQMFHSLKQISEGCNILCATPGRLLDVIRKEKIGLTKLRYLVLDEADR 448
Query: 281 MLDMGFEPQIREVMQN--LPDKH--QTLLFSATMPVEIEALAQEYLT-DPVQVKVGKVSS 335
MLDMGF I ++++ +P K QTL+FSAT P I++LA+E L D + V VG+V
Sbjct: 449 MLDMGFREDIENLLKSSGMPSKEERQTLMFSATFPSSIQSLAREILKPDYLFVVVGQVGG 508
Query: 336 PTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALV 395
++V Q++ +V E K D+ T+VFV+ K + D ++ L
Sbjct: 509 ACSDVEQMVIEVDEFGKKDKLMEILQEIGSER---------TMVFVKTKKKADFIATFLC 559
Query: 396 AEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
E + + ++HG R Q +RE+ALRDFR G ++VAT VA+RGLD+ V++V+N D+P
Sbjct: 560 QEKVPSTSIHGDREQKERETALRDFRTGQCPVIVATSVAARGLDIENVSYVINFDIP 616
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 130/332 (39%), Positives = 191/332 (57%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F ++ L +MK IE + T IQA+ +P++L +D++G A+TG+GKTAAF IP+++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
+ V + ALV+APTRELA Q+ +E+ + ++ + + GG +I Q
Sbjct: 63 ----KVNV-KNSAVQALVVAPTRELAIQVSEELYKIG-AVKRVRVLPIYGGQDIERQIRA 116
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L+ ++V TPGR +DH+ +G L V V+LDEAD ML+MGF I ++ ++P +
Sbjct: 117 LKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAER 176
Query: 302 QTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXX 361
QTLLFSATMP I +A+ ++ +P VKV N+ Q +V E +K D
Sbjct: 177 QTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLD 236
Query: 362 XXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFR 421
P L IVF K R DE++EAL G A +HG +Q+ R S LR F+
Sbjct: 237 IQA--------P-ELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFK 287
Query: 422 NGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
G+ ILVATDVA+RGLD+ GV HV N D+P+
Sbjct: 288 EGAIEILVATDVAARGLDISGVTHVYNFDIPQ 319
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 129/333 (38%), Positives = 195/333 (58%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F+ + L ++ + PT IQ QA+P L G+D+L A+TG+GKTAAF +P+IQ
Sbjct: 7 TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQ 66
Query: 182 HCVAQTPVGRGDGP--LALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQR 239
+ Q + ALVL PTRELAQQ+ ++A ++ + K V GGT++ Q
Sbjct: 67 RFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTE-LKIVAVYGGTSMKVQL 125
Query: 240 SELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPD 299
+ LRGGV I++ATPGR LDH + L +V ++LDEADRMLDMGF P ++ V++ L
Sbjct: 126 NHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSP 185
Query: 300 KHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXX 359
QTL FSAT +I+A+A + DP++V+V S+ TA +Q + V VD+
Sbjct: 186 LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTP-SNSTAETVQ--QMVYP---VDKKRKR 239
Query: 360 XXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
K+ + +VF + + D ++E L +G+ AV+++G ++Q R+ AL D
Sbjct: 240 ELLSYLIGSKN---WQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDD 296
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
F+ G L+ATDVA+RGLD+ + VVN D+P
Sbjct: 297 FKAGKVRALIATDVAARGLDIAQLEQVVNYDMP 329
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 129/333 (38%), Positives = 195/333 (58%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F+ + L ++ + PT IQ QA+P L G+D+L A+TG+GKTAAF +P+IQ
Sbjct: 7 TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQ 66
Query: 182 HCVAQTPVGRGDGP--LALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQR 239
+ Q + ALVL PTRELAQQ+ ++A ++ + K V GGT++ Q
Sbjct: 67 RFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTE-LKIVAVYGGTSMKVQL 125
Query: 240 SELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPD 299
+ LRGGV I++ATPGR LDH + L +V ++LDEADRMLDMGF P ++ V++ L
Sbjct: 126 NHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSP 185
Query: 300 KHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXX 359
QTL FSAT +I+A+A + DP++V+V S+ TA +Q + V VD+
Sbjct: 186 LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTP-SNSTAETVQ--QMVYP---VDKKRKR 239
Query: 360 XXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
K+ + +VF + + D ++E L +G+ AV+++G ++Q R+ AL D
Sbjct: 240 ELLSYLIGSKN---WQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDD 296
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
F+ G L+ATDVA+RGLD+ + VVN D+P
Sbjct: 297 FKAGKVRALIATDVAARGLDIAQLEQVVNYDMP 329
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 130/335 (38%), Positives = 184/335 (54%)
Query: 120 IESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPM 179
+ F + L I+ + YT PT IQ QA+P+ + GRD++G A+TG+GKT AF P+
Sbjct: 6 MSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPI 65
Query: 180 IQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQR 239
+ G LVLAPTRELA QI L+ + +V GG I Q
Sbjct: 66 LDRLSRNASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLN-LRVVMVCGGAKIGGQI 124
Query: 240 SELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPD 299
+L G I+VATPGR +D ++Q SL +V +ILDEAD+MLD+GF +R + +N+P
Sbjct: 125 RQLERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAKNVPS 184
Query: 300 KHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXX 359
K QTL FSATMP +E+LA +L +P +V V + P +I ++V E+ ++
Sbjct: 185 KRQTLFFSATMPKAVESLAATFLRNPAEVSV---APPATTAGRIEQRVCFVEQPEKASLL 241
Query: 360 XXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
+S IVF K D V + L + +VA+HG ++QS RE AL
Sbjct: 242 IEKIRDPELRSA------IVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEA 295
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKV 454
F+ G ILVATD+A+RG+ V + HV+N DLP V
Sbjct: 296 FKAGRVPILVATDIAARGIHVDALTHVINYDLPDV 330
>DICTYBASE|DDB_G0293064 [details] [associations]
symbol:DDB_G0293064 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
Length = 573
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 126/342 (36%), Positives = 203/342 (59%)
Query: 117 PAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFT 176
P PI++ + +I K+ ++ +PT +Q+ P+ALSG D+LG ++TGSGKT +F
Sbjct: 136 PKPIDTIESVPFQSTI-KNFLSKKFEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSFI 194
Query: 177 IPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIA 236
+P I+H +AQ GP LV+APTRELA QI +E + R L + + A + GG
Sbjct: 195 LPAIEHILAQPRQSYYPGPSVLVVAPTRELANQINQEAEQYLR-LVNIEIATIYGGAPRR 253
Query: 237 EQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQN 296
Q+ +L IVV TPGR +D ++ G+ SL +SF+++DEADR+++MGFE QI + +
Sbjct: 254 SQQLQLSRRPKIVVGTPGRIIDFMESGDLSLKNISFLVVDEADRLMEMGFEQQIDGIFNS 313
Query: 297 L-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTAN--VIQILEKV-SENEK 352
+ PD+ Q L +SAT P ++ + A++++ P+++++G S TAN + Q + V ++ +K
Sbjct: 314 IRPDR-QVLYWSATWPKKVSSFAEKHIRTPIRLQIGS-SQLTANKNISQKFKIVPTDADK 371
Query: 353 VDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEG--LHAVALHGGRNQ 410
VD K+ T++F K D + + + G + LHG +Q
Sbjct: 372 VDALMDTLGEIYSADEKA-----QTLIFTMTKKGADTLKHYIQSNGDNVRIDTLHGDVDQ 426
Query: 411 SDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+ RE ++DF+N +I+VATDVASRGLD+ G++HV+N LP
Sbjct: 427 NRRERIVQDFKNKRLDIVVATDVASRGLDIKGISHVINFSLP 468
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 129/338 (38%), Positives = 192/338 (56%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
SF + L ++++ IE YT+PT +Q +A+P L GRDL+ A+TG+GKT F +P+++
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 182 HCVAQ-TP-VGRGDGPL---ALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIA 236
P + GP LVL PTRELA Q+ + K +R L F +A + GG +
Sbjct: 62 RLFPNGVPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKLYARDL-KFVSACIFGGVGMN 120
Query: 237 EQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQN 296
Q + GV ++VA PGR LD QG+ LS V ++LDEADRMLDMGF +++V+
Sbjct: 121 PQVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR 180
Query: 297 LPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRX 356
LP K Q LLFSAT +I +LA + L +P +++V +P ++ +E ++V R
Sbjct: 181 LPAKRQNLLFSATFSNDITSLAGKLLHNPERIEV----TPPNTTVERIE-----QRVFRL 231
Query: 357 XXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESA 416
+ + +VF K + ++E L GL AVA+HG ++Q+ R A
Sbjct: 232 AANHKRSLLAHLITVGAWEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKA 291
Query: 417 LRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKV 454
L DF+ G I+VATD+A+RGLD+ + HVVN +LP V
Sbjct: 292 LADFKAGDVRIMVATDIAARGLDIDQLPHVVNFELPNV 329
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 131/337 (38%), Positives = 191/337 (56%)
Query: 119 PIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIP 178
P+ SF + L SI +I ++ +PT IQA A P LSG+D++G AETGSGKT AF +P
Sbjct: 112 PLLSFDYLSLDSSIQAEIS--KFPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVP 169
Query: 179 MIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQ 238
I H + + G LV++PTRELA QI + L+ + + V GG EQ
Sbjct: 170 AISHLMNDQ---KKRGIQVLVISPTRELASQIYDNLIVLTDKV-GMQCCCVYGGVPKDEQ 225
Query: 239 RSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLP 298
R +L+ +VVATPGR LD LQ+G+ LS+V++++LDEADRML+ GFE I+ +++
Sbjct: 226 RIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETD 284
Query: 299 -DKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTAN--VIQILEKVSENEKVDR 355
K QTL+F+AT P E+ LA ++ +P++V +G TAN + QI+E V K +
Sbjct: 285 ASKRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERK 344
Query: 356 XXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRES 415
K+ ++F K V L G + A+HG +Q R
Sbjct: 345 LLELLKKYHSGPKKN----EKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQ 400
Query: 416 ALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
AL +F++G +N+L+ATDVA+RGLD+ V V+NL P
Sbjct: 401 ALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFP 437
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 121/331 (36%), Positives = 193/331 (58%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F+ L +++K I Y PT IQ Q++P+ L+ D++ A+TG+GKTAAF +P++Q
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
++ P ALVL PTRELAQQ+ K + D I GG + +Q SE
Sbjct: 66 QLISVQPCK--PELRALVLTPTRELAQQVHKSFCHYGQFTD-VTIGIAYGGVSTKKQISE 122
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L+ GV I++ATPGR LD L+ + SLS + ++ DEADRMLDMGF+ +I ++ Q LP
Sbjct: 123 LKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTK 182
Query: 302 QTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXX 361
QTLLFSAT +I +++ L +P V++ + + +V Q++ V + K +
Sbjct: 183 QTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADRKRELTSFLIG 242
Query: 362 XXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFR 421
+ +VF K D++++ + +G+ ++A+HG ++Q RE AL +F+
Sbjct: 243 SRN---------WKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFK 293
Query: 422 NGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
G L+ATDVA+RG+D+ G++HV+N +LP
Sbjct: 294 EGKVRALIATDVAARGIDIKGLSHVINYELP 324
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 121/331 (36%), Positives = 193/331 (58%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F+ L +++K I Y PT IQ Q++P+ L+ D++ A+TG+GKTAAF +P++Q
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
++ P ALVL PTRELAQQ+ K + D I GG + +Q SE
Sbjct: 66 QLISVQPCK--PELRALVLTPTRELAQQVHKSFCHYGQFTD-VTIGIAYGGVSTKKQISE 122
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L+ GV I++ATPGR LD L+ + SLS + ++ DEADRMLDMGF+ +I ++ Q LP
Sbjct: 123 LKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTK 182
Query: 302 QTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXX 361
QTLLFSAT +I +++ L +P V++ + + +V Q++ V + K +
Sbjct: 183 QTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADRKRELTSFLIG 242
Query: 362 XXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFR 421
+ +VF K D++++ + +G+ ++A+HG ++Q RE AL +F+
Sbjct: 243 SRN---------WKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFK 293
Query: 422 NGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
G L+ATDVA+RG+D+ G++HV+N +LP
Sbjct: 294 EGKVRALIATDVAARGIDIKGLSHVINYELP 324
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 125/333 (37%), Positives = 194/333 (58%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
SF+ + L + K + Y P+ IQAQA+P L+G+D++ A+TG+GKTA FT+P+++
Sbjct: 2 SFSALGLSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
+A+ + ALVL PTRELA Q+ + V+ + L ++A+V GG I Q ++
Sbjct: 62 -LLAKGHKAKSGQTRALVLTPTRELAAQVGESVETYGKYLP-LRSAVVFGGVPINPQINK 119
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
LR GV ++VATPGR LD +QQ +++ ++LDEADRMLDMGF I++++ LP K
Sbjct: 120 LRHGVDVLVATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKR 179
Query: 302 QTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXX 361
Q L+FSAT EI LA+ + PV++ V ++ V Q + V + +K
Sbjct: 180 QNLMFSATFSDEIRELAKGLVNHPVEISVTPRNAAATTVKQWICPVDKTQK--------S 231
Query: 362 XXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFR 421
K + +VF K + ++++L+ + A A+HG ++Q R AL DF+
Sbjct: 232 ALLIQLIKQ-ENWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFK 290
Query: 422 NGSTNILVATDVASRGLDVMGVAHVVNLDLPKV 454
+G +LVATD+A+RGLD+ + VVN DLP V
Sbjct: 291 SGEVRVLVATDIAARGLDIDQLPQVVNFDLPNV 323
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 133/333 (39%), Positives = 191/333 (57%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+ +++ + P I+K + + IQ + A+ GRD++G A TG+GKT AF IP+I
Sbjct: 105 AISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIID 164
Query: 182 HCVAQTPV-GRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRS 240
+ GRG PL LVLAPTRELA+Q+EKE + + SLD T + GGT I +Q
Sbjct: 165 KIIKYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLD---TICLYGGTPIGQQMR 221
Query: 241 ELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDK 300
+L GV + V TPGR +D +++G +LS V FV+LDEAD+ML +GF + +++ LP+K
Sbjct: 222 QLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEK 281
Query: 301 HQTLLFSATMPVEIEALAQEYLTDPVQVK-VGKVSSPTANVIQILEKVSENEKVDRXXXX 359
Q+++FSATMP I +L ++YL +P+ V VG A+ I ++++
Sbjct: 282 RQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGP 341
Query: 360 XXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
K C IVF + K D +S AL A ALHG +QS RE L
Sbjct: 342 LVTEHAKGGK-C------IVFTQTKRDADRLSYAL-ARSFKCEALHGDISQSQRERTLAG 393
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
FR+G NILVATDVA+RGLDV V +++ +LP
Sbjct: 394 FRDGHFNILVATDVAARGLDVPNVDLIIHYELP 426
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 129/334 (38%), Positives = 190/334 (56%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F D+ L I++ + Y +P+ IQA+ +P L+GRD+LG A+TGSGKTAAF++P++Q
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
+ + P LVLAPTRELA Q+ + + S+ + + GG Q
Sbjct: 67 NLDPELKA-----PQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRA 121
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
LR G IVV TPGR LDHL++G LS++S ++LDEAD ML MGF + +M +P+ H
Sbjct: 122 LRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGH 181
Query: 302 QTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKV---SENEKVDRXXX 358
QT LFSATMP I + + ++ +P +V++ + ++ Q V +NE + R
Sbjct: 182 QTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL- 240
Query: 359 XXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALR 418
F I+FV K EV+EAL G ++ AL+G NQ+ RE L
Sbjct: 241 -----------EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLE 289
Query: 419 DFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
++G +IL+ATDVA+RGLDV ++ VVN D+P
Sbjct: 290 RLKDGRLDILIATDVAARGLDVERISLVVNYDIP 323
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 132/341 (38%), Positives = 190/341 (55%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
SF + L +++ IE YT+PT +Q +A+P L GRDL+ A+TG+GKT F +P+++
Sbjct: 2 SFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 182 HCVAQTPVGRGD-----GPL---ALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGT 233
P G D GP LVL PTRELA Q+ K +R L F +A + GG
Sbjct: 62 RLF---PNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDL-KFVSACIFGGV 117
Query: 234 NIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREV 293
+ Q + GV ++VA PGR LD QG+ LS V ++LDEADRMLDMGF +++V
Sbjct: 118 GMNPQVQAMARGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKV 177
Query: 294 MQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKV 353
+ LP K Q LLFSAT +I LA + L +P +++V +P ++ +E ++V
Sbjct: 178 LARLPAKRQNLLFSATFSKDITDLAGKLLHNPERIEV----TPPNTTVERIE-----QRV 228
Query: 354 DRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDR 413
R + + +VF K + ++E L GL AVA+HG ++Q+ R
Sbjct: 229 FRLPASHKRALLAHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNAR 288
Query: 414 ESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKV 454
AL DF+ G ILVATD+A+RGLD+ + HVVN +LP V
Sbjct: 289 TKALADFKAGEVRILVATDIAARGLDIDQLPHVVNFELPNV 329
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 126/346 (36%), Positives = 193/346 (55%)
Query: 113 SVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKT 172
+V PA +FT++ L ++ + EY +PT IQA+A+P +GRDL+ A TGSGKT
Sbjct: 3 TVTTPA---TFTELGLITPLLARLAELEYHQPTPIQARAIPSVFAGRDLIAGANTGSGKT 59
Query: 173 AAFTIPMIQHCVAQTPVG----RGDGPLALVLAPTRELAQQIEKEVKALSRSLDS-FKTA 227
A F +PM+Q G +G+ LVL PTRELA+Q+ +K+ + + KT
Sbjct: 60 ATFALPMLQKLREDISSGSKNSKGNFVTGLVLVPTRELAKQVADSIKSYAVHFNGEIKTL 119
Query: 228 IVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFE 287
V GG ++ Q LRGGV I+VATPGR LD + L +V ++LDEADRML +GF
Sbjct: 120 AVFGGVSVNIQMLALRGGVDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFT 179
Query: 288 PQIREVMQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKV 347
++ ++ P K QTLLFSAT P ++ L QE L +P+++++ + T ++Q + V
Sbjct: 180 EELTALLALTPKKKQTLLFSATFPEQVTTLTQELLNNPIEIQLQSADAST--LVQRVFTV 237
Query: 348 SENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGG 407
++ EK + ++FV K C+ ++E L G+ A HG
Sbjct: 238 NKGEKT---------AVLAHLIQQEQWRQALIFVNAKHHCEHLAEKLAKRGITAAVFHGD 288
Query: 408 RNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
+ QS+R L F+ G +L+ATD+A+RGLD+ + V+N +LP+
Sbjct: 289 KGQSERSRVLDGFKAGDIEVLIATDIAARGLDIEKLPVVINFNLPR 334
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 129/349 (36%), Positives = 197/349 (56%)
Query: 116 APAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAF 175
AP I +F + L ++ +I YT+ T +Q ++P+ L+GRDL+ CA+TGSGKTAAF
Sbjct: 257 APPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAF 316
Query: 176 TIPMIQHC----VAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVG 231
+P++ H + + P +++APTREL QI E + S + ++ G
Sbjct: 317 LLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGT-CVRAVVIYG 375
Query: 232 GTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIR 291
GT ++ G +I+ ATPGR +D + + L +V +++LDEADRMLDMGF P+++
Sbjct: 376 GTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMK 435
Query: 292 EVMQ--NLPDKHQ--TLLFSATMPVEIEALAQEYL-TDPVQVKVGKVSSPTANVIQILEK 346
+++ +P K Q TLLFSAT P EI+ LA E+L ++ + V VG+V +V Q + +
Sbjct: 436 KLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQSILQ 495
Query: 347 VSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHG 406
V + K ++ T+VFVE K + D ++ L E + ++HG
Sbjct: 496 VGQYSKREKLVEILRNIGDER---------TMVFVETKKKADFIATFLCQEKISTTSIHG 546
Query: 407 GRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVL 455
R Q +RE AL DFR G +LVAT VA+RGLD+ V HV+N DLP +
Sbjct: 547 DREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTI 595
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 127/349 (36%), Positives = 198/349 (56%)
Query: 116 APAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAF 175
AP I +F + L ++ +I YT+ T +Q ++P+ L+GRDL+ CA+TGSGKTAAF
Sbjct: 263 APPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAF 322
Query: 176 TIPMIQHC----VAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVG 231
+P++ H + + P +++APTREL QI E + S + ++ G
Sbjct: 323 LLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGT-CVRAVVIYG 381
Query: 232 GTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIR 291
GT + ++ G +I+ ATPGR +D + + L ++ +++LDEADRMLDMGF P+++
Sbjct: 382 GTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMK 441
Query: 292 EVMQ--NLPDKHQ--TLLFSATMPVEIEALAQEYL-TDPVQVKVGKVSSPTANVIQILEK 346
+++ +P K Q TL+FSAT P EI+ LA E+L ++ + V VG+V +V Q + +
Sbjct: 442 KLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQ 501
Query: 347 VSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHG 406
V + K ++ T+VFVE K + D ++ L E + ++HG
Sbjct: 502 VGQFSKREKLVEILRNIGDER---------TMVFVETKKKADFIATFLCQEKISTTSIHG 552
Query: 407 GRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVL 455
R Q +RE AL DFR G +LVAT VA+RGLD+ V HV+N DLP +
Sbjct: 553 DREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTI 601
>UNIPROTKB|Q86TM3 [details] [associations]
symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
GermOnline:ENSG00000184735 Uniprot:Q86TM3
Length = 631
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 132/343 (38%), Positives = 197/343 (57%)
Query: 117 PAPIESFTDMCL-HPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAF 175
P P F D +P ++K I +PT IQ+QA P+ L G DL+ A+TG+GKT ++
Sbjct: 217 PKPTCRFKDAFQQYPDLLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSY 276
Query: 176 TIPMIQHCVAQTPVGRG--DGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGT 233
+P H +Q P+ R +GP LVL PTRELA +E E S K+ + GG
Sbjct: 277 LMPGFIHLDSQ-PISREQRNGPGMLVLTPTRELALHVEAECSKYSYK--GLKSICIYGGR 333
Query: 234 NIAEQRSELRGGVSIVVATPGRFLDHLQQGNT-SLSRVSFVILDEADRMLDMGFEPQIRE 292
N Q ++ GV I++ATPGR L+ LQ N+ +L ++++++DEAD+MLDM FEPQIR+
Sbjct: 334 NRNGQIEDISKGVDIIIATPGR-LNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRK 392
Query: 293 VMQNL-PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVI-QILEKVSEN 350
++ ++ PD+ QT++ SAT P + LA YL DP+ V VG ++ N + Q + +E
Sbjct: 393 ILLDVRPDR-QTVMTSATWPDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVTTEK 451
Query: 351 EKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQ 410
EK ++ P I+FV +K D++S +G+ A +LHG Q
Sbjct: 452 EK--------RALTQEFVENMSPNDKVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQ 503
Query: 411 SDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
SD+E A+ DF++G+ IL+ TD+ SRGLD+ V HV N D P+
Sbjct: 504 SDQERAVEDFKSGNIKILITTDIVSRGLDLNDVTHVYNYDFPR 546
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 127/349 (36%), Positives = 198/349 (56%)
Query: 116 APAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAF 175
AP I +F + L ++ +I YT+ T +Q ++P+ L+GRDL+ CA+TGSGKTAAF
Sbjct: 283 APPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAF 342
Query: 176 TIPMIQHC----VAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVG 231
+P++ H + + P +++APTREL QI E + S + ++ G
Sbjct: 343 LLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGT-CVRAVVIYG 401
Query: 232 GTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIR 291
GT + ++ G +I+ ATPGR +D + + L ++ +++LDEADRMLDMGF P+++
Sbjct: 402 GTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMK 461
Query: 292 EVMQ--NLPDKHQ--TLLFSATMPVEIEALAQEYL-TDPVQVKVGKVSSPTANVIQILEK 346
+++ +P K Q TL+FSAT P EI+ LA E+L ++ + V VG+V +V Q + +
Sbjct: 462 KLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQ 521
Query: 347 VSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHG 406
V + K ++ T+VFVE K + D ++ L E + ++HG
Sbjct: 522 VGQFSKREKLVEILRNIGDER---------TMVFVETKKKADFIATFLCQEKISTTSIHG 572
Query: 407 GRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVL 455
R Q +RE AL DFR G +LVAT VA+RGLD+ V HV+N DLP +
Sbjct: 573 DREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTI 621
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 128/349 (36%), Positives = 198/349 (56%)
Query: 116 APAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAF 175
AP I +F + L ++ +I YT+ T +Q ++P+ L+GRDL+ CA+TGSGKTAAF
Sbjct: 284 APPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAF 343
Query: 176 TIPMIQHC----VAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVG 231
+P++ H + + P +++APTREL QI E + S + ++ G
Sbjct: 344 LLPILAHMMHDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGT-CVRAVVIYG 402
Query: 232 GTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIR 291
GT + ++ G +I+ ATPGR +D + + L +V +++LDEADRMLDMGF P+++
Sbjct: 403 GTQLGYSIRQIVQGCNILCATPGRLMDIIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMK 462
Query: 292 EVMQ--NLPDKHQ--TLLFSATMPVEIEALAQEYL-TDPVQVKVGKVSSPTANVIQILEK 346
+++ +P K Q TL+FSAT P EI+ LA E+L ++ + V VG+V +V Q + +
Sbjct: 463 KLISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQTILQ 522
Query: 347 VSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHG 406
V + K ++ T+VFVE K + D ++ L E + ++HG
Sbjct: 523 VGQYSKREKLVEILRSIGDER---------TMVFVETKKKADFIATFLCQEKISTTSIHG 573
Query: 407 GRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVL 455
R Q +RE AL DFR G +LVAT VA+RGLD+ V HV+N DLP +
Sbjct: 574 DREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTI 622
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 127/349 (36%), Positives = 198/349 (56%)
Query: 116 APAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAF 175
AP I +F + L ++ +I YT+ T +Q ++P+ L+GRDL+ CA+TGSGKTAAF
Sbjct: 284 APPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAF 343
Query: 176 TIPMIQHC----VAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVG 231
+P++ H + + P +++APTREL QI E + S + ++ G
Sbjct: 344 LLPILAHMMHDGITASCFKELQEPECIIVAPTRELVNQIYLEARKFSFGT-CVRAVVIYG 402
Query: 232 GTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIR 291
GT + ++ G +I+ ATPGR +D + + L ++ +++LDEADRMLDMGF P+++
Sbjct: 403 GTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMK 462
Query: 292 EVMQ--NLPDKHQ--TLLFSATMPVEIEALAQEYL-TDPVQVKVGKVSSPTANVIQILEK 346
+++ +P K Q TL+FSAT P EI+ LA E+L ++ + V VG+V +V Q + +
Sbjct: 463 KLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQ 522
Query: 347 VSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHG 406
V + K ++ T+VFVE K + D ++ L E + ++HG
Sbjct: 523 VGQFSKREKLVEILRNIGDER---------TMVFVETKKKADFIATFLCQEKISTTSIHG 573
Query: 407 GRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVL 455
R Q +RE AL DFR G +LVAT VA+RGLD+ V HV+N DLP +
Sbjct: 574 DREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTI 622
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 133/358 (37%), Positives = 205/358 (57%)
Query: 105 VDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGC 164
VDVT VP PA I +F + L ++ +++ Y + T +Q ++P+ ++GRDL+ C
Sbjct: 262 VDVT--GKDVP-PA-ILTFEEANLCETLRRNVARAGYVKLTPVQKHSIPIIMAGRDLMAC 317
Query: 165 AETGSGKTAAFTIPMIQHC----VAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRS 220
A+TGSGKTAAF +P++ + + + + P A+++APTREL QI + + S
Sbjct: 318 AQTGSGKTAAFLLPILSYMMNEGITASQYLQLQEPEAIIIAPTRELINQIYLDARKFSYG 377
Query: 221 LDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADR 280
+ +V GG ++ G +I+ ATPGR LD + + LS++ +++LDEADR
Sbjct: 378 T-CVRPVVVYGGIQPVHAMRDVEKGCNILCATPGRLLDIVSKEKIGLSKLRYLVLDEADR 436
Query: 281 MLDMGFEPQIREVMQN--LP--DKHQTLLFSATMPVEIEALAQEYL-TDPVQVKVGKVSS 335
MLDMGF P+I ++M +P +K QTL+FSAT P EI LA YL ++ + V VG V
Sbjct: 437 MLDMGFAPEIEKLMTKPGMPTKEKRQTLMFSATYPEEIRRLASNYLKSEHLFVVVGLVGG 496
Query: 336 PTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALV 395
++V Q + ++ EN K+++ KS T++FV K + D ++ L
Sbjct: 497 ACSDVAQTVLEMRENGKMEKLLEIL--------KSSEK-ERTMIFVNTKKKADFIAGYLC 547
Query: 396 AEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
E + ++HG R Q RESAL DFR G ++V T VA+RGLD+ V HV+N D+PK
Sbjct: 548 QEKFSSTSIHGDREQYQRESALWDFRTGKCTVIVCTAVAARGLDIENVQHVINYDVPK 605
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 126/332 (37%), Positives = 186/332 (56%)
Query: 121 ESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMI 180
ESF+ C P I++ I Y + T IQ QA+P G+D+L A+TG+GKTAAF +P++
Sbjct: 4 ESFS-FC--PEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPIL 60
Query: 181 QHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRS 240
Q V L+L PTRELA Q+ + V+A S+ L+ F + GG + Q
Sbjct: 61 QKMVENPSETLKSNTRVLILTPTRELAAQVAENVEAYSKYLN-FSVLTIYGGVKVETQAQ 119
Query: 241 ELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDK 300
+L+ G I+VATPGR L+HL N SLS V F++LDEADRMLDMGF I++++Q + K
Sbjct: 120 KLKRGADIIVATPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNKK 179
Query: 301 HQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXX 360
Q LLFSAT ++ LA E + P + K ++ V Q++ V + K +
Sbjct: 180 RQNLLFSATFSSAVKKLANEMMIKPQVISADKQNTTADTVSQVVYPVEQRRKRE------ 233
Query: 361 XXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDF 420
K+ + +VF + D + + L +G+ + +HG + Q R ALR+F
Sbjct: 234 LLSELIGKKN---WQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREF 290
Query: 421 RNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+G +LVAT+VA+RGLD+ + +VVN DLP
Sbjct: 291 VSGKVRVLVATEVAARGLDIPSLEYVVNFDLP 322
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 133/341 (39%), Positives = 199/341 (58%)
Query: 116 APAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAF 175
A ++F ++ L P +++ IE ++T+PT IQ++A+P AL G+D++G A+TGSGKTAAF
Sbjct: 118 AELKFKTFKELNLVPDLLESIESMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAF 177
Query: 176 TIPMIQHCV-AQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTN 234
IP++Q AQ P ALVLAPTREL QI+ AL S+ +++ +VGG +
Sbjct: 178 AIPILQSLWHAQQPY------FALVLAPTRELTFQIKDTFDALGSSM-GLRSSCIVGGMD 230
Query: 235 IAEQRSELRGGVSIVVATPGRFLDHLQQGNT-SLSRVSFVILDEADRMLDMGFEPQIREV 293
+ +Q +L ++VATPGR +DHL+ SL + ++++DEADR+LDM F P + ++
Sbjct: 231 MMDQARDLMRKPHVIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKI 290
Query: 294 MQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKV 353
++ +P K T LFSATM +IE L + L +PV+V V N++Q + V++ K
Sbjct: 291 LKVIPIKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQTADNLVQSMMLVNDGYK- 349
Query: 354 DRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAE--GLHAVALHGGRNQS 411
KS F T+ +R AL+A G +AV LHG +QS
Sbjct: 350 --NTILIHLLNEFMGKSIIVFTRTVAHAQRT--------ALLARILGFNAVPLHGQLSQS 399
Query: 412 DRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
R +L F++ NILVATDVA+RGLD+ V V+N D+P
Sbjct: 400 QRLGSLNKFKSNQANILVATDVAARGLDIPSVDVVINYDIP 440
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 130/354 (36%), Positives = 199/354 (56%)
Query: 111 SGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSG 170
SG P PA I +F + L ++ +I YT+ T +Q ++P+ GRDL+ CA+TGSG
Sbjct: 281 SGHDPPPA-ILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTGSG 339
Query: 171 KTAAFTIPMIQHC----VAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKT 226
KTAAF +P++ H + + P +++APTREL QI E + S +
Sbjct: 340 KTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGT-CVRA 398
Query: 227 AIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGF 286
++ GGT + ++ G +I+ ATPGR +D + + L +V +++LDEADRMLDMGF
Sbjct: 399 VVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKEKIGLRQVKYLVLDEADRMLDMGF 458
Query: 287 EPQIREVMQ--NLPDKHQ--TLLFSATMPVEIEALAQEYL-TDPVQVKVGKVSSPTANVI 341
P++++++ +P K Q TL+FSAT P EI+ LA E+L ++ + V VG+V +V
Sbjct: 459 GPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQ 518
Query: 342 QILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHA 401
Q + +V + K ++ T+VFVE K + D ++ L E +
Sbjct: 519 QTILQVGQYSKREKLVEILRNIGDER---------TMVFVETKKKADFIATFLCQEKIST 569
Query: 402 VALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVL 455
++HG R Q +RE AL DFR G +LVAT VA+RGLD+ V HV+N DLP +
Sbjct: 570 TSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTI 623
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 130/354 (36%), Positives = 199/354 (56%)
Query: 111 SGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSG 170
SG P PA I +F + L ++ +I YT+ T +Q ++P+ GRDL+ CA+TGSG
Sbjct: 281 SGHDPPPA-ILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTGSG 339
Query: 171 KTAAFTIPMIQHC----VAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKT 226
KTAAF +P++ H + + P +++APTREL QI E + S +
Sbjct: 340 KTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGT-CVRA 398
Query: 227 AIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGF 286
++ GGT + ++ G +I+ ATPGR +D + + L +V +++LDEADRMLDMGF
Sbjct: 399 VVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKEKIGLRQVKYLVLDEADRMLDMGF 458
Query: 287 EPQIREVMQ--NLPDKHQ--TLLFSATMPVEIEALAQEYL-TDPVQVKVGKVSSPTANVI 341
P++++++ +P K Q TL+FSAT P EI+ LA E+L ++ + V VG+V +V
Sbjct: 459 GPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQ 518
Query: 342 QILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHA 401
Q + +V + K ++ T+VFVE K + D ++ L E +
Sbjct: 519 QTILQVGQYSKREKLVEILRNIGDER---------TMVFVETKKKADFIATFLCQEKIST 569
Query: 402 VALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVL 455
++HG R Q +RE AL DFR G +LVAT VA+RGLD+ V HV+N DLP +
Sbjct: 570 TSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTI 623
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 128/349 (36%), Positives = 195/349 (55%)
Query: 116 APAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAF 175
AP I +F + L ++ +I YT+ T +Q ++P+ L+GRDL+ CA+TGSGKTAAF
Sbjct: 256 APPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAF 315
Query: 176 TIPMIQHC----VAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVG 231
+P++ H + + P +++APTREL QI E + S + ++ G
Sbjct: 316 LLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGT-CVRAVVIYG 374
Query: 232 GTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIR 291
GT ++ G +I+ ATPGR +D + + L +V +++LDEADRMLDMGF P+++
Sbjct: 375 GTQFGHSVRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMK 434
Query: 292 EVMQ--NLPDKHQ--TLLFSATMPVEIEALAQEYLTDP-VQVKVGKVSSPTANVIQILEK 346
+++ +P K Q TLLFSAT P EI+ LA ++L + V VG+V +V Q + +
Sbjct: 435 KLISCPGMPSKEQRQTLLFSATFPEEIQRLAGDFLKSSYLFVAVGQVGGACRDVQQTILQ 494
Query: 347 VSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHG 406
V + K ++ T+VFVE K + D ++ L E + ++HG
Sbjct: 495 VGQYSKREKLVEILRNIGDER---------TMVFVETKKKADFIATFLCQEKISTTSIHG 545
Query: 407 GRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVL 455
R Q +RE AL DFR G +LVAT VA+RGLD+ V HV+N DLP +
Sbjct: 546 DREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTI 594
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 127/349 (36%), Positives = 197/349 (56%)
Query: 116 APAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAF 175
AP I +F + L ++ +I YT+ T +Q ++P+ L+GRDL+ CA+TGSGKTAAF
Sbjct: 281 APPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAF 340
Query: 176 TIPMIQHC----VAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVG 231
+P++ H + + P +++APTREL QI E + S + ++ G
Sbjct: 341 LLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGT-CVRAVVIYG 399
Query: 232 GTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIR 291
GT + ++ G +I+ ATPGR +D + + L ++ +++LDEADRMLDMGF P+++
Sbjct: 400 GTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMK 459
Query: 292 EVMQ--NLPDKHQ--TLLFSATMPVEIEALAQEYL-TDPVQVKVGKVSSPTANVIQILEK 346
+++ +P K Q TL+FSAT P EI+ LA E+L ++ + V VG+V +V Q +
Sbjct: 460 KLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQADLQ 519
Query: 347 VSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHG 406
V + K ++ T+VFVE K + D ++ L E + ++HG
Sbjct: 520 VGQYSKREKLLEILRNIGDER---------TMVFVETKKKADFIATFLCQEKISTTSIHG 570
Query: 407 GRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVL 455
R Q +RE AL DFR G +LVAT VA+RGLD+ V HV+N DLP +
Sbjct: 571 DREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTI 619
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 126/333 (37%), Positives = 188/333 (56%)
Query: 120 IESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPM 179
I F + LHP+I+ + Y P++IQ Q++P+ L+G D++G A+TG+GKTAAF +P+
Sbjct: 5 IGGFAALELHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPI 64
Query: 180 IQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQR 239
+ H + P R P AL+LAPTRELA Q+ + ++ + V GG + Q
Sbjct: 65 L-HRI--DPSKRE--PQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQL 119
Query: 240 SELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPD 299
+R G IVVATPGR DHL++ L+ V+ ++LDEAD ML +GF + + + +P+
Sbjct: 120 KAIRNGAQIVVATPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKAMPE 179
Query: 300 KHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXX 359
QT+LFSAT+P I A+A+ +L DP VK+ S T V I E+ D+
Sbjct: 180 TRQTVLFSATLPQSIRAIAERHLKDPKHVKI---QSKTQTVTAI-EQAHLLVHADQKTSA 235
Query: 360 XXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
F I+FV K +++ AL A+G A AL+G Q+ RE +
Sbjct: 236 VLSLL-----EVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDS 290
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
++G +I+VATDVA+RGLDV + HV N+D+P
Sbjct: 291 LKDGRLDIVVATDVAARGLDVPRITHVFNVDMP 323
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 126/334 (37%), Positives = 193/334 (57%)
Query: 121 ESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMI 180
++F+ + L +++++ Y T IQA ++P+ L+G+D++ A+TGSGKTAAF I ++
Sbjct: 4 KAFSSLRLKAPMLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGIGLL 63
Query: 181 QHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRS 240
A + R ALVL PTRELA Q+ KE++ L+R D+ K + GG Q
Sbjct: 64 SRLDALS--FRVQ---ALVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLG 118
Query: 241 ELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDK 300
L G +V+ TPGR LDHL++G+ LS + ++LDEADRMLDMGF+ I ++ P K
Sbjct: 119 SLEHGAHVVIGTPGRLLDHLRRGSLDLSALRTLVLDEADRMLDMGFQDDISALIAAAPPK 178
Query: 301 HQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXX 360
QTLLFSAT P I A++ +PV+V V +V A + Q+ +V ++++
Sbjct: 179 RQTLLFSATYPDSIAAMSAGVQREPVEVSVDEVHGEGA-IEQVFYEVDSGQRIEAVERIL 237
Query: 361 XXXXXXXXKSCHPFPLT-IVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
H P + ++F K C EV+ AL G A+A+HG +Q +R+ L
Sbjct: 238 G----------HYRPESALIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVR 287
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
F N S ++LVATDVA+RGLD+ ++ V+N +L +
Sbjct: 288 FANRSASVLVATDVAARGLDIKELSAVINYELTR 321
>POMBASE|SPAC31A2.07c [details] [associations]
symbol:dbp10 "ATP-dependent RNA helicase Dbp10
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC31A2.07c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455 OrthoDB:EOG4JWZP1
EMBL:AB027882 PIR:S59645 RefSeq:NP_592919.1
ProteinModelPortal:Q09719 STRING:Q09719 EnsemblFungi:SPAC31A2.07c.1
GeneID:2543197 KEGG:spo:SPAC31A2.07c OMA:FYIPYRP NextBio:20804220
Uniprot:Q09719
Length = 848
Score = 418 (152.2 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 97/232 (41%), Positives = 138/232 (59%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F M L+ ++++ I + PT IQ + +P+ L GRD++G A TGSGKTAAF IPMI+
Sbjct: 70 NFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIE 129
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
H + AL+L+P RELA Q K VK S+ D ++ +VGG ++ EQ S
Sbjct: 130 HLKSTLA---NSNTRALILSPNRELALQTVKVVKDFSKGTD-LRSVAIVGGVSLEEQFSL 185
Query: 242 LRGGVSIVVATPGRFLDHLQ-QGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDK 300
L G IVVATPGRFL HL+ + LS + +V+ DEADR+ +MGF Q+ E++ LP
Sbjct: 186 LSGKPDIVVATPGRFL-HLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTS 244
Query: 301 HQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEK 352
QTLLFSAT+P + A+ L DPV V++ S +A++ V E+
Sbjct: 245 RQTLLFSATLPRTLVDFAKAGLQDPVLVRLDVESKVSADLQSAFFSVKTAER 296
Score = 162 (62.1 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 377 TIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASR 436
T+VFV K + VSE LV G ++G +Q R + + +FR G TN+LV TDVASR
Sbjct: 349 TLVFVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASR 408
Query: 437 GLDVMGVAHVVNLDLP 452
G+D+ +A+V+N D P
Sbjct: 409 GIDIPLLANVINYDFP 424
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 129/335 (38%), Positives = 187/335 (55%)
Query: 120 IESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPM 179
+E F + L ++K + + PT IQ +A+P+ L G +L+G A TG+GKTAA+ +P+
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 180 IQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQR 239
+Q + RG L++ PTRELA Q+ EV L + L + V GG I Q
Sbjct: 61 LQR------IQRGKKAQVLIVTPTRELALQVADEVAKLGKYL-KVRALAVYGGQAIERQI 113
Query: 240 SELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPD 299
LR GV ++V TPGR LDH+ + + + VILDEAD MLDMGF I ++ L +
Sbjct: 114 RGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTN 173
Query: 300 KHQTLLFSATMPVEIEALAQEYLTDPVQVK-VGKVSSPTANVIQILEKVSENEKVDRXXX 358
+ QTLLFSAT+P I+ + +++L VK VG+ + A + Q+ ++ E EK++
Sbjct: 174 RQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPA-IRQVYYELPETEKIE---- 228
Query: 359 XXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALR 418
S P IVF K R DEV E L G A LHG +Q +R ++
Sbjct: 229 ----GLVSILNSELPIQ-AIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIK 283
Query: 419 DFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
F+ G T +LVATDVA+RGLD+ V+HV+N D+P+
Sbjct: 284 SFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQ 318
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 129/335 (38%), Positives = 187/335 (55%)
Query: 120 IESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPM 179
+E F + L ++K + + PT IQ +A+P+ L G +L+G A TG+GKTAA+ +P+
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 180 IQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQR 239
+Q + RG L++ PTRELA Q+ EV L + L + V GG I Q
Sbjct: 61 LQR------IQRGKKAQVLIVTPTRELALQVADEVAKLGKYL-KVRALAVYGGQAIERQI 113
Query: 240 SELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPD 299
LR GV ++V TPGR LDH+ + + + VILDEAD MLDMGF I ++ L +
Sbjct: 114 RGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTN 173
Query: 300 KHQTLLFSATMPVEIEALAQEYLTDPVQVK-VGKVSSPTANVIQILEKVSENEKVDRXXX 358
+ QTLLFSAT+P I+ + +++L VK VG+ + A + Q+ ++ E EK++
Sbjct: 174 RQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPA-IRQVYYELPETEKIE---- 228
Query: 359 XXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALR 418
S P IVF K R DEV E L G A LHG +Q +R ++
Sbjct: 229 ----GLVSILNSELPIQ-AIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIK 283
Query: 419 DFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
F+ G T +LVATDVA+RGLD+ V+HV+N D+P+
Sbjct: 284 SFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQ 318
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 130/341 (38%), Positives = 192/341 (56%)
Query: 118 APIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTI 177
A +++F + L +++ + E +P+ IQ+ P L GRDL+G A+TGSGKT AF I
Sbjct: 113 AALKTFAESNLPENVLDCCKTFE--KPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGI 170
Query: 178 PMIQHCVAQTP-VGRGD---GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGT 233
P I H + + +G G P LVL+PTRELA QI ++ K+ V GG+
Sbjct: 171 PAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPC-GLKSICVYGGS 229
Query: 234 NIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREV 293
+ Q S +R GV IV+ TPGR D ++ LS VSFV+LDEADRMLDMGFE +R +
Sbjct: 230 SKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFI 289
Query: 294 MQNLPDKHQTLLFSATMPVEIEALAQEYLT-DPVQVKVGKVS-SPTANVIQILEKVSENE 351
+ N Q ++FSAT P+++ LAQE++ +P++V +G V + +V+QI+E + E
Sbjct: 290 LSNTNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERA 349
Query: 352 KVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQS 411
+ D+ K+ +VF K + + L G AV++HG + QS
Sbjct: 350 R-DQRLIALLEKYHKSQKN-----RVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQS 403
Query: 412 DRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+R +L F+ GS +LVATDVA+RGLD+ V V+N P
Sbjct: 404 ERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFP 444
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 130/333 (39%), Positives = 190/333 (57%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+ D+ + P I+K ++ + IQ + A+ GRD++G A TG+GKT AF IP+I
Sbjct: 117 AIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIID 176
Query: 182 HCVA-QTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRS 240
+ GRG P LVLAPTRELA+Q+EKE + + SLD T + GGT I +Q
Sbjct: 177 KIIKFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLD---TICLYGGTPIGQQMR 233
Query: 241 ELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDK 300
EL G+ + V TPGR +D +++G +LS V FV+LDEAD+ML +GF + ++Q LP K
Sbjct: 234 ELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAK 293
Query: 301 HQTLLFSATMPVEIEALAQEYLTDPVQVK-VGKVSSPTANVIQILEKVSENEKVDRXXXX 359
Q+++FSATMP I +L ++YL +P+ + VG A+ I + +++
Sbjct: 294 RQSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGP 353
Query: 360 XXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
K C IVF + K D ++ L A+ ALHG +Q+ RE L
Sbjct: 354 LVKEHGKGGK-C------IVFTQTKRDADRLAFGL-AKSYKCEALHGDISQAQRERTLAG 405
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
FR+G+ +ILVATDVA+RGLDV V V++ +LP
Sbjct: 406 FRDGNFSILVATDVAARGLDVPNVDLVIHYELP 438
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 119/332 (35%), Positives = 183/332 (55%)
Query: 121 ESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMI 180
+SF++ L + + + Y PT +Q + +PVAL +DL+ ++TGSGKTA+F IP+
Sbjct: 4 KSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLC 63
Query: 181 QHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRS 240
+ + + + P ALVL PTRELA Q+++++ + R K A + G + A Q+
Sbjct: 64 E--MVEWEENK---PQALVLTPTRELAVQVKEDITNIGR-FKRIKAAAIYGKSPFARQKL 117
Query: 241 ELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDK 300
EL+ IVV TPGR LDH+++G SL R+ ++++DEAD ML+MGF Q+ ++ LP K
Sbjct: 118 ELKQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTK 177
Query: 301 HQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXX 360
T+LFSAT+P ++E L++ Y+ P +++ T + L +V E EK+
Sbjct: 178 RMTMLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEEKLS---LLK 234
Query: 361 XXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDF 420
SC I+F + D V L +HGG Q DR + DF
Sbjct: 235 DVTTIENPDSC------IIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDF 288
Query: 421 RNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
R G LVATDVA+RG+D+ + HV+N D+P
Sbjct: 289 RKGKFRYLVATDVAARGIDIDNITHVINYDIP 320
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 119/332 (35%), Positives = 183/332 (55%)
Query: 121 ESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMI 180
+SF++ L + + + Y PT +Q + +PVAL +DL+ ++TGSGKTA+F IP+
Sbjct: 4 KSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLC 63
Query: 181 QHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRS 240
+ + + + P ALVL PTRELA Q+++++ + R K A + G + A Q+
Sbjct: 64 E--MVEWEENK---PQALVLTPTRELAVQVKEDITNIGR-FKRIKAAAIYGKSPFARQKL 117
Query: 241 ELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDK 300
EL+ IVV TPGR LDH+++G SL R+ ++++DEAD ML+MGF Q+ ++ LP K
Sbjct: 118 ELKQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTK 177
Query: 301 HQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXX 360
T+LFSAT+P ++E L++ Y+ P +++ T + L +V E EK+
Sbjct: 178 RMTMLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEEKLS---LLK 234
Query: 361 XXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDF 420
SC I+F + D V L +HGG Q DR + DF
Sbjct: 235 DVTTIENPDSC------IIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDF 288
Query: 421 RNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
R G LVATDVA+RG+D+ + HV+N D+P
Sbjct: 289 RKGKFRYLVATDVAARGIDIDNITHVINYDIP 320
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 113/331 (34%), Positives = 191/331 (57%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F ++ L ++++ ++ Y +PT IQ+ ++ ++G+D+LG A+TG+GKT AF +P++
Sbjct: 7 TFRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLN 66
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
+QT P LVLAPTRELA Q+ + + ++ + +F + GG ++ +Q +
Sbjct: 67 KVTSQTT------PQILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNA 120
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L+ G ++V TPGR +DH+++G L + ++LDEAD ML MGF I ++++ P +
Sbjct: 121 LKRGPQVIVGTPGRVMDHMRRGTLKLETLQALVLDEADEMLKMGFIDDIEWILEHTPPQR 180
Query: 302 QTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXX 361
Q LFSATMP +I+ +A ++L + + + + ++ Q +VS++ K++
Sbjct: 181 QLALFSATMPEQIKRVANKHLKNATNISIAASHTTVDSIEQRFVQVSQHNKLEALVRVLE 240
Query: 362 XXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFR 421
I+FV + C E++E L A G + LHG NQ RE A+ +
Sbjct: 241 VENTEGI---------IIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQLK 291
Query: 422 NGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
NG +IL+ATDVA+RGLDV + HVVN D+P
Sbjct: 292 NGKLDILIATDVAARGLDVERIGHVVNYDIP 322
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 121/334 (36%), Positives = 189/334 (56%)
Query: 120 IESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPM 179
+++F ++ + + + + T T IQ +A+PV LSG+D++G A+TG+GKT AF +P+
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 180 IQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQR 239
++ ++ AL++APTRELA QI E+K + + + GG ++A+Q
Sbjct: 64 LEKIDPES-----SDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQL 118
Query: 240 SELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPD 299
+L+G IVVATPGR LDH+++ LS +S ++LDEAD+ML GF I +++ P
Sbjct: 119 RKLKGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPG 178
Query: 300 KHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXX 359
QT+LFSAT+P +I+ LA+ Y+ +P ++V S V I ++V E DR
Sbjct: 179 SKQTMLFSATIPKDIKKLAKRYMDEPQMIQV---QSEEVTVDTIEQRVIET--TDRAKPD 233
Query: 360 XXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
+ PF L ++F K R ++ + L G + LHG Q+ RE ++
Sbjct: 234 ALRFVMDRDQ---PF-LAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKS 289
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
FR L+ATDVA+RGLDV GV HV N D+P+
Sbjct: 290 FREAKIQYLIATDVAARGLDVDGVTHVFNYDIPE 323
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 121/334 (36%), Positives = 189/334 (56%)
Query: 120 IESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPM 179
+++F ++ + + + + T T IQ +A+PV LSG+D++G A+TG+GKT AF +P+
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 180 IQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQR 239
++ ++ AL++APTRELA QI E+K + + + GG ++A+Q
Sbjct: 64 LEKIDPES-----SDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQL 118
Query: 240 SELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPD 299
+L+G IVVATPGR LDH+++ LS +S ++LDEAD+ML GF I +++ P
Sbjct: 119 RKLKGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPG 178
Query: 300 KHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXX 359
QT+LFSAT+P +I+ LA+ Y+ +P ++V S V I ++V E DR
Sbjct: 179 SKQTMLFSATIPKDIKKLAKRYMDEPQMIQV---QSEEVTVDTIEQRVIET--TDRAKPD 233
Query: 360 XXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
+ PF L ++F K R ++ + L G + LHG Q+ RE ++
Sbjct: 234 ALRFVMDRDQ---PF-LAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKS 289
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
FR L+ATDVA+RGLDV GV HV N D+P+
Sbjct: 290 FREAKIQYLIATDVAARGLDVDGVTHVFNYDIPE 323
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 120/334 (35%), Positives = 187/334 (55%)
Query: 120 IESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPM 179
+ F L SI+ + Y +PT IQ + +P ++G DLLG A+TG+GKTAAF++P+
Sbjct: 1 MSEFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPI 60
Query: 180 IQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQR 239
I + +L+L PTRELA QI + + S L KT +V GG Q
Sbjct: 61 INKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGL-GLKTKVVYGGVGRQAQV 119
Query: 240 SELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPD 299
+ G+ I+VATPGR LD ++ G+ + + +LDEAD MLDMGF ++ ++ LP
Sbjct: 120 DSIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPK 179
Query: 300 KHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXX 359
QTLLFSATMP EIE LA+ LTDP ++++ ++ T + + + V +K ++
Sbjct: 180 SRQTLLFSATMPAEIEILAEAILTDPTKIQI---TAETVTIDLVNQSVYHLDKSNKVPLL 236
Query: 360 XXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 419
+ ++F + K D + +AL + A +LH G+ Q+ RE AL++
Sbjct: 237 FNILTKADYEK------VLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQN 290
Query: 420 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
F++ + +LVATDVA+RG+DV + V+N +LP+
Sbjct: 291 FKDSTLRVLVATDVAARGIDVDNITLVINYNLPE 324
>TAIR|locus:2828586 [details] [associations]
symbol:AT3G02065 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0003723 EMBL:AC011664 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000006599 OMA:VTRPIID EMBL:AY065172
EMBL:BT001184 IPI:IPI00516794 IPI:IPI00525607 RefSeq:NP_001030621.1
RefSeq:NP_850499.1 RefSeq:NP_974208.1 UniGene:At.41185
UniGene:At.47211 ProteinModelPortal:Q3EBD3 SMR:Q3EBD3 IntAct:Q3EBD3
PaxDb:Q3EBD3 PRIDE:Q3EBD3 EnsemblPlants:AT3G02065.2
EnsemblPlants:AT3G02065.3 GeneID:821155 KEGG:ath:AT3G02065
GeneFarm:1017 TAIR:At3g02065 InParanoid:Q3EBD3 PhylomeDB:Q3EBD3
ProtClustDB:PLN00206 Genevestigator:Q3EBD3 Uniprot:Q3EBD3
Length = 505
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 123/359 (34%), Positives = 192/359 (53%)
Query: 101 LRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRD 160
LR +D+ V P P+ +FT L P ++ ++E Y PT IQ QA+P AL+G+
Sbjct: 90 LRRKLDIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKS 149
Query: 161 LLGCAETGSGKTAAFTIPMIQHCV---AQTPVGRGDGPLALVLAPTRELAQQIEKEVKAL 217
LL A+TGSGKTA+F +P+I C ++ P + PLA+VLAPTREL Q+E + K L
Sbjct: 150 LLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKML 209
Query: 218 SRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDE 277
+ L FKTA+VVGG ++ Q ++ GV +++ TPGR +D L + L + +LDE
Sbjct: 210 GKGLP-FKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDE 268
Query: 278 ADRMLDMGFEPQIREVMQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPT 337
D ML GF Q+ ++ Q L + Q LLFSAT+ E+E + + + V +G + P
Sbjct: 269 VDCMLQRGFRDQVMQIFQAL-SQPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPN 327
Query: 338 ANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEAL-VA 396
V Q+ V +K + H P +V+V + D ++ A+ V
Sbjct: 328 KAVNQLAIWVDAKQKKQKLFDILRSQN-------HFKPPAVVYVSSRVGADLLANAITVV 380
Query: 397 EGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVL 455
G+ A+++HG + +R + F G +LV+T V RG+D++ V V+ D+P +
Sbjct: 381 TGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTI 439
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 113/264 (42%), Positives = 166/264 (62%)
Query: 191 RGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVV 250
RGDGP+ LVLAPTRELAQQ+++ R+ K+ + GG Q +L GV I +
Sbjct: 85 RGDGPICLVLAPTRELAQQVQQVAAEYCRAC-RLKSTCIYGGAPKGPQIRDLERGVEICI 143
Query: 251 ATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL-PDKHQTLLFSAT 309
ATPGR +D L+ G T+L R ++++LDEADRMLDMGFEPQIR+++ + PD+ QTL++SAT
Sbjct: 144 ATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR-QTLMWSAT 202
Query: 310 MPVEIEALAQEYLTDPVQVKVGKVS-SPTANVIQILEKVSENEKVDRXXXXXXXXXXXXX 368
P E+ LA+++L D + + +G + S N++QI++ + EK ++
Sbjct: 203 WPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKE 262
Query: 369 KSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNIL 428
TIVFVE K RCDE++ + +G A+ +HG ++Q +R+ L +F++G IL
Sbjct: 263 NK------TIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPIL 316
Query: 429 VATDVASRGLDVMGVAHVVNLDLP 452
+ATDVASRGLDV V V+N D P
Sbjct: 317 IATDVASRGLDVEDVKFVINYDYP 340
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 123/335 (36%), Positives = 187/335 (55%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
SF+ + L I+ I YT+PT+IQ +A+PV L+G+D++ A+TG+GKTA+F +P+++
Sbjct: 2 SFSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLE 61
Query: 182 HCVAQ-TPVG---RGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAE 237
+Q G R AL+L PTRELA Q+E + ++ LD A+ GG + E
Sbjct: 62 QLNSQYKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAMY-GGVDAQE 120
Query: 238 QRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL 297
Q+ L GV I+VATPGR LD Q + ++LDEADRMLDMGF I ++++ L
Sbjct: 121 QKQRLIWGVDILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIERL 180
Query: 298 PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXX 357
P+ Q LLFSATM E+ LA+ + PV++ +G + + Q L V +K ++
Sbjct: 181 PEHRQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTV---DKANKSA 237
Query: 358 XXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESAL 417
+ ++F+E K ++ L G+ A ++H GR Q RE L
Sbjct: 238 LLSHIITTQNWQQA------LIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKIL 291
Query: 418 RDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
DF++G LVAT +A+RGLD+ ++ V+N DLP
Sbjct: 292 NDFKSGKIKFLVATAIAARGLDIGELSRVINYDLP 326
>UNIPROTKB|I3LNN1 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:PIRNWKE Ensembl:ENSSSCT00000027880 Uniprot:I3LNN1
Length = 801
Score = 427 (155.4 bits), Expect = 1.1e-51, Sum P(2) = 1.1e-51
Identities = 90/205 (43%), Positives = 128/205 (62%)
Query: 102 RLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDL 161
R + +T G +P P I S+ D L P I++ I+ Y PT IQ QA+P+ L RD+
Sbjct: 374 REDYSITTKGGKIPNP--IRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDI 431
Query: 162 LGCAETGSGKTAAFTIPMIQHCVAQTPVGR----GDGPLALVLAPTRELAQQIEKEVKAL 217
+G AETGSGKTAAF IP++ + R GP A++LAPTRELAQQIE+E
Sbjct: 432 IGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKF 491
Query: 218 SRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDE 277
+ L + V+GG + +Q LR G IV+ATPGR +D L+ LSR ++V+LDE
Sbjct: 492 GKPL-GIRPVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDE 550
Query: 278 ADRMLDMGFEPQIREVMQNLPDKHQ 302
ADRM+DMGFEP ++++++++P +Q
Sbjct: 551 ADRMIDMGFEPDVQKILEHMPVSNQ 575
Score = 142 (55.0 bits), Expect = 1.1e-51, Sum P(2) = 1.1e-51
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 400 HAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
+A LHGG+ Q RE AL + + G+ +ILVATDVA RG+D+ V+ VVN D+ K
Sbjct: 671 NACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAK 724
>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
symbol:PFE0925c "snrnp protein, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 545 (196.9 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 143/366 (39%), Positives = 201/366 (54%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
++ + G VP P PI + + L ++K I+ +Y +PT IQ QA+P+AL RDL+G A
Sbjct: 685 EIYIKGGVVP-P-PIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIA 742
Query: 166 ETGSGKTAAFTIPMIQHCVAQTPVG---RGDGPLALVLAPTRELAQQIEKEVKALSRSLD 222
ETGSGKTAAF +PM+ + P+ DGP ALV+AP+RELA QI +E + S
Sbjct: 743 ETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFA-SYC 801
Query: 223 SFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRML 282
S +T VVGG N Q ELR GV IV+ TPGR D L++ T L++ ++VILDEADRM+
Sbjct: 802 SCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILDEADRMM 861
Query: 283 DMGFEPQIREVMQNLPDKH-----QTLLFSATMPVE----IEALAQEY-LTDPVQV-KVG 331
DMGFE + ++ +P + L M + + L Q + T P V ++
Sbjct: 862 DMGFEDTVHYILDKIPTSNLKSEDDALALQEEMMTKAGHRLYRLTQMFSATMPPSVERLS 921
Query: 332 KVSSPTANVIQILE----KVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRC 387
+ I I + K S +K++ + P+ IVFV +K
Sbjct: 922 RKYLRAPAYISIGDPGAGKRSIEQKLEFLTEGKKKQKLQEILEMYEPPI-IVFVNQKKVA 980
Query: 388 DEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVV 447
D +S+++ AVALHGG+ Q RE L F+N +ILVATDVA RG+DV GV V+
Sbjct: 981 DIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEFDILVATDVAGRGIDVHGVKLVI 1040
Query: 448 NLDLPK 453
N D+PK
Sbjct: 1041 NFDMPK 1046
>UNIPROTKB|Q8I0W7 [details] [associations]
symbol:PFE0925c "Snrnp protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 545 (196.9 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 143/366 (39%), Positives = 201/366 (54%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
++ + G VP P PI + + L ++K I+ +Y +PT IQ QA+P+AL RDL+G A
Sbjct: 685 EIYIKGGVVP-P-PIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIA 742
Query: 166 ETGSGKTAAFTIPMIQHCVAQTPVG---RGDGPLALVLAPTRELAQQIEKEVKALSRSLD 222
ETGSGKTAAF +PM+ + P+ DGP ALV+AP+RELA QI +E + S
Sbjct: 743 ETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFA-SYC 801
Query: 223 SFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRML 282
S +T VVGG N Q ELR GV IV+ TPGR D L++ T L++ ++VILDEADRM+
Sbjct: 802 SCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILDEADRMM 861
Query: 283 DMGFEPQIREVMQNLPDKH-----QTLLFSATMPVE----IEALAQEY-LTDPVQV-KVG 331
DMGFE + ++ +P + L M + + L Q + T P V ++
Sbjct: 862 DMGFEDTVHYILDKIPTSNLKSEDDALALQEEMMTKAGHRLYRLTQMFSATMPPSVERLS 921
Query: 332 KVSSPTANVIQILE----KVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRC 387
+ I I + K S +K++ + P+ IVFV +K
Sbjct: 922 RKYLRAPAYISIGDPGAGKRSIEQKLEFLTEGKKKQKLQEILEMYEPPI-IVFVNQKKVA 980
Query: 388 DEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVV 447
D +S+++ AVALHGG+ Q RE L F+N +ILVATDVA RG+DV GV V+
Sbjct: 981 DIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEFDILVATDVAGRGIDVHGVKLVI 1040
Query: 448 NLDLPK 453
N D+PK
Sbjct: 1041 NFDMPK 1046
>WB|WBGene00001598 [details] [associations]
symbol:glh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 535 (193.4 bits), Expect = 1.7e-51, P = 1.7e-51
Identities = 132/391 (33%), Positives = 211/391 (53%)
Query: 76 QPVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKD 135
+ VFN K S+ ++ FN EV+L + + TV P ++F + L ++ K+
Sbjct: 304 EDVFNMQKISEGLM-FNKFFDAEVKLTSS-EKTVGI------KPCKTFAEANLTETMQKN 355
Query: 136 IEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGR-GDG 194
+ Y++ T IQ A+P+ G D++ CA+TGSGKTAAF +P++ + + G+G
Sbjct: 356 VAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEG 415
Query: 195 ---PLALVLAPTRELAQQIEKEVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVV 250
P ++L PTRELA QI E + + +++ K V GG + + ++ G +I+V
Sbjct: 416 GCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKP--VYGGLAVGYNKGQIEKGATIIV 473
Query: 251 ATPGRFLDHLQQGNTSLSRVSFVILDEADRMLD-MGFEPQIREVMQ--NLPDKH--QTLL 305
T GR ++G L + F +LDEADRM+D MGF I ++ ++P K QTL+
Sbjct: 474 GTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLM 533
Query: 306 FSATMPVEIEALAQEYLTDP-VQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXX- 363
FSAT P ++ A+ +L + V + + K+ + V+Q E+ +EK D+
Sbjct: 534 FSATFPDSVQEAARAFLRENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDI 593
Query: 364 -XXXXXKSCHPFPL-TIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFR 421
KS + T+VFV ++ D ++ L + + A+ +HG R Q +R ALR FR
Sbjct: 594 DSYTTEKSAEVYTKKTMVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFR 653
Query: 422 NGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
NGS +L+AT VA RGLD+ GV HV+N D+P
Sbjct: 654 NGSKPVLIATAVAERGLDIKGVDHVINYDMP 684
>UNIPROTKB|P34689 [details] [associations]
symbol:glh-1 "ATP-dependent RNA helicase glh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 535 (193.4 bits), Expect = 1.7e-51, P = 1.7e-51
Identities = 132/391 (33%), Positives = 211/391 (53%)
Query: 76 QPVFNNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMCLHPSIMKD 135
+ VFN K S+ ++ FN EV+L + + TV P ++F + L ++ K+
Sbjct: 304 EDVFNMQKISEGLM-FNKFFDAEVKLTSS-EKTVGI------KPCKTFAEANLTETMQKN 355
Query: 136 IEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGR-GDG 194
+ Y++ T IQ A+P+ G D++ CA+TGSGKTAAF +P++ + + G+G
Sbjct: 356 VAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEG 415
Query: 195 ---PLALVLAPTRELAQQIEKEVKALS-RSLDSFKTAIVVGGTNIAEQRSELRGGVSIVV 250
P ++L PTRELA QI E + + +++ K V GG + + ++ G +I+V
Sbjct: 416 GCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKP--VYGGLAVGYNKGQIEKGATIIV 473
Query: 251 ATPGRFLDHLQQGNTSLSRVSFVILDEADRMLD-MGFEPQIREVMQ--NLPDKH--QTLL 305
T GR ++G L + F +LDEADRM+D MGF I ++ ++P K QTL+
Sbjct: 474 GTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLM 533
Query: 306 FSATMPVEIEALAQEYLTDP-VQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXX- 363
FSAT P ++ A+ +L + V + + K+ + V+Q E+ +EK D+
Sbjct: 534 FSATFPDSVQEAARAFLRENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDI 593
Query: 364 -XXXXXKSCHPFPL-TIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFR 421
KS + T+VFV ++ D ++ L + + A+ +HG R Q +R ALR FR
Sbjct: 594 DSYTTEKSAEVYTKKTMVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFR 653
Query: 422 NGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
NGS +L+AT VA RGLD+ GV HV+N D+P
Sbjct: 654 NGSKPVLIATAVAERGLDIKGVDHVINYDMP 684
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 128/349 (36%), Positives = 195/349 (55%)
Query: 116 APAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAF 175
AP I +F + L ++ +I YT+ T +Q ++P+ L+GRDL+ CA+TGSGKTAAF
Sbjct: 268 APPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAF 327
Query: 176 TIPMIQHC----VAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVG 231
+P++ H + + P +++APTREL QI E + S + ++ G
Sbjct: 328 LLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGT-CVRAVVIYG 386
Query: 232 GTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIR 291
GT ++ G +I+ ATPGR +D + + L +V +++LDEADRMLDMGF P+++
Sbjct: 387 GTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMK 446
Query: 292 EVMQ--NLPDKHQ--TLLFSATMPVEIEALAQEYL-TDPVQVKVGKVSSPTANVIQILEK 346
+++ +P K Q TLLFSAT P EI+ LA E+L ++ + V VG+V +V Q + +
Sbjct: 447 KLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQSILQ 506
Query: 347 VSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHG 406
V K + P+ VFVE K + D ++ L E + ++HG
Sbjct: 507 VGPVFKKRKLVEILRNIGDER-------PM--VFVETKKKADFIATFLCQEKISTTSIHG 557
Query: 407 GRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVL 455
R Q +RE AL DFR G +LVAT VA+RGLD+ V HV+N +LP +
Sbjct: 558 DREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFNLPSTI 606
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 128/349 (36%), Positives = 195/349 (55%)
Query: 116 APAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAF 175
AP I +F + L ++ +I YT+ T +Q ++P+ L+GRDL+ CA+TGSGKTAAF
Sbjct: 268 APPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAF 327
Query: 176 TIPMIQHC----VAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVG 231
+P++ H + + P +++APTREL QI E + S + ++ G
Sbjct: 328 LLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGT-CVRAVVIYG 386
Query: 232 GTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIR 291
GT ++ G +I+ ATPGR +D + + L +V +++LDEADRMLDMGF P+++
Sbjct: 387 GTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMK 446
Query: 292 EVMQ--NLPDKHQ--TLLFSATMPVEIEALAQEYL-TDPVQVKVGKVSSPTANVIQILEK 346
+++ +P K Q TLLFSAT P EI+ LA E+L ++ + V VG+V +V Q + +
Sbjct: 447 KLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQSILQ 506
Query: 347 VSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHG 406
V K + P+ VFVE K + D ++ L E + ++HG
Sbjct: 507 VGPVFKKRKLVEILRNIGDER-------PM--VFVETKKKADFIATFLCQEKISTTSIHG 557
Query: 407 GRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVL 455
R Q +RE AL DFR G +LVAT VA+RGLD+ V HV+N +LP +
Sbjct: 558 DREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFNLPSTI 606
>SGD|S000000441 [details] [associations]
symbol:PRP5 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000348 "mRNA branch
site recognition" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000000441 GO:GO:0005524
GO:GO:0005681 EMBL:BK006936 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GeneTree:ENSGT00610000086076 KO:K12811 HOGENOM:HOG000007229
GO:GO:0000348 OMA:SLVIIYN OrthoDB:EOG40CMR1 EMBL:M33191 EMBL:Z36106
EMBL:AY692817 PIR:A35791 RefSeq:NP_009796.1
ProteinModelPortal:P21372 SMR:P21372 DIP:DIP-88N IntAct:P21372
MINT:MINT-403988 STRING:P21372 PaxDb:P21372 EnsemblFungi:YBR237W
GeneID:852539 KEGG:sce:YBR237W CYGD:YBR237w NextBio:971604
Genevestigator:P21372 GermOnline:YBR237W Uniprot:P21372
Length = 849
Score = 539 (194.8 bits), Expect = 2.0e-51, P = 2.0e-51
Identities = 138/402 (34%), Positives = 221/402 (54%)
Query: 66 RRSYASHPVPQPVFNNWK-PSDRVLRFNPEQIEEVRLRL-NVDVTVASGSVPAPAPIESF 123
++ Y S +P N+ S+ V + ++EE+RL L N+ + +G P P+ +
Sbjct: 202 KQIYYSPEELEPFQKNFYIESETVSSMSEMEVEELRLSLDNIKIK-GTG---CPKPVTKW 257
Query: 124 TDMCLHPSIMKDI-EFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQH 182
+ + L M I E + T IQ+QA+P +SGRD++G ++TGSGKT ++ +P+++
Sbjct: 258 SQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQ 317
Query: 183 CVAQTPVGRGD-GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
AQ P+ + + GP+ L+LAPTRELA QI +EV + + S ++ GG+ + +Q ++
Sbjct: 318 VKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITD 377
Query: 242 LRGGVSIVVATPGRFLD--HLQQGNT-SLSRVSFVILDEADRMLDMGFEPQIREVMQNL- 297
L+ G IVVATPGRF+D L G S R++FV++DEADR+ D+GFEPQI ++M+ +
Sbjct: 378 LKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGFEPQITQIMKTVR 437
Query: 298 PDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKV-SENEKVD-- 354
PDK Q +LFSAT P ++ + A L P+ + + NV Q SE+EK D
Sbjct: 438 PDK-QCVLFSATFPNKLRSFAVRVLHSPISITINSKGMVNENVKQKFRICHSEDEKFDNL 496
Query: 355 ------RXXXXXXXXXXXXXKSCHPFPL---TIVFVERKTRCDEVSEALVAEGLHAVALH 405
R +S + I+FV + CD +S+ L+ G+ A+H
Sbjct: 497 VQLIHERSEFFDEVQSENDGQSSDVEEVDAKAIIFVSSQNICDFISKKLLNAGIVTCAIH 556
Query: 406 GGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVV 447
G+ +R L F+ +IL+ T+V SRGL+V V+ V+
Sbjct: 557 AGKPYQERLMNLEKFKREKNSILLCTEVLSRGLNVPEVSLVI 598
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 131/356 (36%), Positives = 194/356 (54%)
Query: 104 NVDVTVASGSVPAPAPIESFTDMCLHPSIMKDI--EFHEYTRPTSIQAQAMPVALSGRDL 161
++ +T AS P+ PI SF+ L PS KD+ + PT+IQ+ P+ +GRD+
Sbjct: 57 SIKITDASADKPSLRPIISFS--FLPPS-NKDLYAPLDGFASPTAIQSATWPLLFAGRDV 113
Query: 162 LGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSL 221
+G AETGSGKT AF +P ++ + + PLA+V++PTRELA QI ++ + +
Sbjct: 114 IGIAETGSGKTLAFGLPCLKKVLDLKTKQKSCRPLAVVISPTRELAMQIYDQLVKFAEKV 173
Query: 222 DSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRM 281
D + A + GG EQR L+ ++VVATPGR D G+ L RV +++LDEADRM
Sbjct: 174 D-IQVACIFGGVKKDEQREALKSA-AVVVATPGRLKDLQNDGSLDLGRVKYLVLDEADRM 231
Query: 282 LDMGFEPQIREVMQNLP-DKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSS--PTA 338
LD GFE I++++ +P K QT++F+AT P + LA ++T PV V +G S P A
Sbjct: 232 LDKGFEQDIKDIISPMPVSKRQTVMFTATWPPIVRNLASTFMTSPVTVTIGGDPSADPRA 291
Query: 339 N--VIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVA 396
N + Q++E V +EK R + F K V L
Sbjct: 292 NSRIKQVVEVVKPHEKEQRLVQILNRHQRGTPDK------VLAFCLYKKEAMRVERLLRT 345
Query: 397 EGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+G +HG +Q +R +L F++G+ +LVATDVA+RGLD+ V VVN+ P
Sbjct: 346 KGFKVAGIHGDLSQQERFRSLEAFKSGAATVLVATDVAARGLDIPHVKLVVNVTFP 401
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 114/332 (34%), Positives = 195/332 (58%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
SF+ + L+ ++ + Y +PT IQ +A+P L+ +D++ A+TG+GKTAAF +P++Q
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 182 HCVAQTPVGRGDGPL-ALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRS 240
+A + ALVL PTRELA Q+++ ++ D + I GG +I Q++
Sbjct: 62 LLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTD-IRVGIAYGGVSIEAQQA 120
Query: 241 ELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDK 300
G+ +++ATPGR LDHL+QG +L++++ ++ DEADRMLDMGF +I+ V++ +P +
Sbjct: 121 VFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQ 180
Query: 301 HQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXX 360
QTLLFSAT+ I + ++ L DP +++V K ++ A + Q + + + K +
Sbjct: 181 RQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDRKTE------ 234
Query: 361 XXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDF 420
K+ + ++F K D+++ L G+ + HG +Q RE L++F
Sbjct: 235 FVSHLVRSKN---WQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEF 291
Query: 421 RNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+ G +LVATDVA+RGLD+ + +V+N +LP
Sbjct: 292 KQGLVQVLVATDVAARGLDIAELQYVINFELP 323
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 114/332 (34%), Positives = 195/332 (58%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
SF+ + L+ ++ + Y +PT IQ +A+P L+ +D++ A+TG+GKTAAF +P++Q
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 182 HCVAQTPVGRGDGPL-ALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRS 240
+A + ALVL PTRELA Q+++ ++ D + I GG +I Q++
Sbjct: 62 LLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTD-IRVGIAYGGVSIEAQQA 120
Query: 241 ELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDK 300
G+ +++ATPGR LDHL+QG +L++++ ++ DEADRMLDMGF +I+ V++ +P +
Sbjct: 121 VFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQ 180
Query: 301 HQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXX 360
QTLLFSAT+ I + ++ L DP +++V K ++ A + Q + + + K +
Sbjct: 181 RQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDRKTE------ 234
Query: 361 XXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDF 420
K+ + ++F K D+++ L G+ + HG +Q RE L++F
Sbjct: 235 FVSHLVRSKN---WQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEF 291
Query: 421 RNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+ G +LVATDVA+RGLD+ + +V+N +LP
Sbjct: 292 KQGLVQVLVATDVAARGLDIAELQYVINFELP 323
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 118/330 (35%), Positives = 189/330 (57%)
Query: 123 FTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQH 182
F+ + LH +++K + Y PT IQ QA+P L+G+++L A+TG+GKTA+F +P++ H
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLL-H 61
Query: 183 CVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL 242
A P R +++L PTRELA Q+E+ + ++ L A+ GG + A Q+ L
Sbjct: 62 RFADAPKIRPKRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMY-GGVDAAPQKKRL 120
Query: 243 RGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQ 302
GV ++VATPGR LD Q VS ++LDEADRMLDMGF I +++ LP++ Q
Sbjct: 121 IEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQRQ 180
Query: 303 TLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXX 362
LLFSAT+ +++ALA+ + D +++++ + ++ + + Q L V ++ K
Sbjct: 181 NLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDRK--------SA 232
Query: 363 XXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRN 422
K + + ++F++ K ++ L G+ A A H GR+Q+ RE L DF+
Sbjct: 233 LLSHLIKE-NNWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKA 291
Query: 423 GSTNILVATDVASRGLDVMGVAHVVNLDLP 452
G LVAT V SRG+D+ + V+N DLP
Sbjct: 292 GKVPFLVATGVVSRGIDIDALERVINYDLP 321
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 124/332 (37%), Positives = 177/332 (53%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F ++ L P I+K + YT PT +QA A+P AL DLL A+TG+GKTAAF +P +Q
Sbjct: 2 TFAELKLAPHILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPALQ 61
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
++ P G G GP LVL PTRELAQQ+ V+ + ++ ++GG Q
Sbjct: 62 R-LSSPPQGPGRGPRVLVLTPTRELAQQVTDAVRTYGAFM-RVRSGAILGGMPYHAQLRL 119
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L V +VATPGR +D L + + LSR+ ++LDEADRMLDMGF + + P
Sbjct: 120 LSAPVDFIVATPGRLVDLLDRRSLDLSRLELLVLDEADRMLDMGFSDDVDRIAAASPATR 179
Query: 302 QTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXX 361
QTLLF+ATM + LA L +P ++ + + ++ Q L + +R
Sbjct: 180 QTLLFTATMDSAMARLAGRLLREPERIDIAGTKTTHEHIEQRLHVADDLHHKNRLLRHLI 239
Query: 362 XXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFR 421
I+F K + ++ L A+G A ALHG Q+ R + +
Sbjct: 240 TDESLRR--------AIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRTIAAMK 291
Query: 422 NGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
G +LVATDVA+RGLDV G++HV+N DLPK
Sbjct: 292 QGRIRLLVATDVAARGLDVTGISHVINFDLPK 323
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 118/330 (35%), Positives = 189/330 (57%)
Query: 123 FTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQH 182
F+ + LH +++K + Y PT IQ QA+P L+G+++L A+TG+GKTA+F +P++ H
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLL-H 61
Query: 183 CVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL 242
A P R +++L PTRELA Q+E+ + ++ L A+ GG + A Q+ L
Sbjct: 62 RFADAPKIRPKRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMY-GGVDAAPQKKRL 120
Query: 243 RGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQ 302
GV ++VATPGR LD Q VS ++LDEADRMLDMGF I +++ LP++ Q
Sbjct: 121 IEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQRQ 180
Query: 303 TLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXX 362
LLFSAT+ +++ALA+ + D +++++ + ++ + + Q L V ++ K
Sbjct: 181 NLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDRK--------SA 232
Query: 363 XXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRN 422
K + + ++F++ K ++ L G+ A A H GR+Q+ RE L DF+
Sbjct: 233 LLSHLIKE-NNWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKA 291
Query: 423 GSTNILVATDVASRGLDVMGVAHVVNLDLP 452
G LVAT V SRG+D+ + V+N DLP
Sbjct: 292 GKVPFLVATGVVSRGIDIDALERVINYDLP 321
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 128/353 (36%), Positives = 195/353 (55%)
Query: 116 APAPIESF--TDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTA 173
AP I +F TD+C ++ DI YT+ T +Q +P+ L+GRDL+ CA+TGSGKTA
Sbjct: 261 APPAILTFEETDLC--QTLNNDITKAGYTKLTPVQKYGIPIILAGRDLMACAQTGSGKTA 318
Query: 174 AFTIPMIQHCVAQ-TPVGR---GDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIV 229
AF +P++ H + R P +++APTREL QI E + S + ++
Sbjct: 319 AFLLPILAHMMRDGVTASRFKDQQEPECIIVAPTRELINQIFLEARKFSFGT-CVRPVVI 377
Query: 230 VGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQ 289
GGT + ++ G +I+ ATPGR +D + + L ++ +++LDEADRMLDMGF P+
Sbjct: 378 YGGTQLGHSIRQIMQGCNILCATPGRLMDIIGKEKIGLGQIRYLVLDEADRMLDMGFGPE 437
Query: 290 IREVMQ--NLPDKHQ--TLLFSATMPV-EIEALAQEYLTDPV--QVKVGKVSSPTANVIQ 342
+++++ +P K Q TL+FSAT P + A E+L + V VG+V ++V Q
Sbjct: 438 MKKLISFPGMPSKEQRQTLMFSATFPRGNFKDWAGEFLKNLTICLVAVGQVGGACSDVQQ 497
Query: 343 ILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAV 402
+ +V + K ++ T+VFVE K + D ++ L E +
Sbjct: 498 TVLQVGQYSKREKLVEILRNIGEER---------TMVFVETKKKADFIATFLCQEKISTT 548
Query: 403 ALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKVL 455
++HG R Q +RE AL DFR G +LVAT VA+RGLD+ V HV+N DLP +
Sbjct: 549 SIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTI 601
>UNIPROTKB|Q47Z59 [details] [associations]
symbol:CPS_3215 "Putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0042254
"ribosome biogenesis" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 119/336 (35%), Positives = 188/336 (55%)
Query: 123 FTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQH 182
F+D L ++M IE + PT IQ QA+P A++G DL+ ++TGSGKT AF IP +Q
Sbjct: 3 FSDFGLDSALMSTIEHMGFNEPTQIQQQAIPAAMAGHDLIASSKTGSGKTLAFIIPALQR 62
Query: 183 CVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL 242
+ + D P ++L PTRELA+Q+ +++ + + +K +++GG N +Q L
Sbjct: 63 LSKNRALSKRD-PRVVILTPTRELAKQVFSQLRLFTANTQ-YKAVLILGGENFNDQVKVL 120
Query: 243 RGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPD-KH 301
+ +VATPGR DHL QG+ L+ + +ILDEADRMLD+GF ++ ++ + K
Sbjct: 121 QKEPEFIVATPGRLADHLTQGHFHLNGLELLILDEADRMLDLGFSKELTQINKAADHRKR 180
Query: 302 QTLLFSATMP-VEIEALAQEYLTDPVQVKVGKVSSPTANVIQ---ILEKVSENEKVDRXX 357
QTLLFSAT+ ++ A E LT P ++ + S ++ + + + +++ E +
Sbjct: 181 QTLLFSATLDHAQVNEFATELLTKPKRIAINAGHSEHVDIAKRFYLADNLTQKEAL---- 236
Query: 358 XXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESAL 417
KS I+F ++ D +++ L + L+AVAL G NQ R +
Sbjct: 237 ---LQHFLVTEKSQQ----IIIFTATRSDTDRLAKLLTEQNLNAVALSGELNQGQRNQIM 289
Query: 418 RDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
F G ILV TD+ASRGLD++ V+HV+N D+PK
Sbjct: 290 ESFSKGQHKILVTTDLASRGLDLINVSHVINFDMPK 325
>TIGR_CMR|CPS_3215 [details] [associations]
symbol:CPS_3215 "putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 119/336 (35%), Positives = 188/336 (55%)
Query: 123 FTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQH 182
F+D L ++M IE + PT IQ QA+P A++G DL+ ++TGSGKT AF IP +Q
Sbjct: 3 FSDFGLDSALMSTIEHMGFNEPTQIQQQAIPAAMAGHDLIASSKTGSGKTLAFIIPALQR 62
Query: 183 CVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL 242
+ + D P ++L PTRELA+Q+ +++ + + +K +++GG N +Q L
Sbjct: 63 LSKNRALSKRD-PRVVILTPTRELAKQVFSQLRLFTANTQ-YKAVLILGGENFNDQVKVL 120
Query: 243 RGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPD-KH 301
+ +VATPGR DHL QG+ L+ + +ILDEADRMLD+GF ++ ++ + K
Sbjct: 121 QKEPEFIVATPGRLADHLTQGHFHLNGLELLILDEADRMLDLGFSKELTQINKAADHRKR 180
Query: 302 QTLLFSATMP-VEIEALAQEYLTDPVQVKVGKVSSPTANVIQ---ILEKVSENEKVDRXX 357
QTLLFSAT+ ++ A E LT P ++ + S ++ + + + +++ E +
Sbjct: 181 QTLLFSATLDHAQVNEFATELLTKPKRIAINAGHSEHVDIAKRFYLADNLTQKEAL---- 236
Query: 358 XXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESAL 417
KS I+F ++ D +++ L + L+AVAL G NQ R +
Sbjct: 237 ---LQHFLVTEKSQQ----IIIFTATRSDTDRLAKLLTEQNLNAVALSGELNQGQRNQIM 289
Query: 418 RDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
F G ILV TD+ASRGLD++ V+HV+N D+PK
Sbjct: 290 ESFSKGQHKILVTTDLASRGLDLINVSHVINFDMPK 325
>DICTYBASE|DDB_G0281711 [details] [associations]
symbol:ddx27 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
Length = 783
Score = 528 (190.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 118/334 (35%), Positives = 192/334 (57%)
Query: 120 IESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPM 179
+ +F ++ L ++K ++ +++PT IQA+A+P+AL+G+D+L A TGSGKTAAF +P+
Sbjct: 189 LPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPV 248
Query: 180 IQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQR 239
++ + + R L+L PTRELA Q + ++ L++ + + ++VGG + Q
Sbjct: 249 LERLLFRDSEYRAIR--VLILLPTRELALQCQSVMENLAQ-FSNITSCLIVGGLSNKAQE 305
Query: 240 SELRGGVSIVVATPGRFLDHLQQGN-TSLSRVSFVILDEADRMLDMGFEPQIREVMQNLP 298
ELR +V+ATPGR +DHL + L + +ILDEADR+LDMGF+ +I +++++ P
Sbjct: 306 VELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCP 365
Query: 299 DKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXX 358
QT+LFSAT+ E++ LA+ L P++V+V + T+ + Q K+ DR
Sbjct: 366 TNRQTMLFSATLNDEVKTLAKLSLQQPIRVQVDALMQVTSTLEQEFVKIKPQHLSDRPAI 425
Query: 359 XXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALR 418
+ TI+F K + L A LHG +Q R +L+
Sbjct: 426 LLSLCTRVFNQGG-----TIIFCRSKKEVHRLRIIFGLSDLKAAELHGNLSQEQRFDSLQ 480
Query: 419 DFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
FR+G N L+A+DVASRGLD++GV V+N ++P
Sbjct: 481 QFRDGQVNYLLASDVASRGLDIIGVKTVINYNMP 514
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 138/348 (39%), Positives = 195/348 (56%)
Query: 106 DVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCA 165
D T SG PAPA +SF ++ + + + E Y PT IQ+QA+P+AL GRD++G A
Sbjct: 33 DETQTSGEEPAPA--KSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLA 90
Query: 166 ETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFK 225
ETGSGKTAAF +PM+Q + + P LVLAPTRELA QI + + L ++ +
Sbjct: 91 ETGSGKTAAFALPMLQ-ALMEAP----QTLFGLVLAPTRELAYQISQAFETLGSTI-GVR 144
Query: 226 TAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNT-SLSRVSFVILDEADRMLDM 284
A++VGG ++ Q L I+VATPGR LDHL+ SL + ++ +DEADR+LDM
Sbjct: 145 CAVIVGGMDMVAQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLAIDEADRLLDM 204
Query: 285 GFEPQIREVMQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQIL 344
F + ++++ LP T LFSATM ++E+L + L++PV+V V T + +Q
Sbjct: 205 DFGESLDKIIRILPRTRHTYLFSATMSTKVESLQRASLSNPVRVSVSS-KYQTVSTLQS- 262
Query: 345 EKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVAL 404
+ K + +S F T+ +R V+ L A G A+ L
Sbjct: 263 SYICIPHK-HKNLYLVYLLNEFAGQSAIIFTTTVHETQR------VAFMLRALGFGAIPL 315
Query: 405 HGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
HG +QS R AL FR+ S +ILVATDVA+RGLD+ V V N DLP
Sbjct: 316 HGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVFNFDLP 363
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 124/333 (37%), Positives = 183/333 (54%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
SF + L P ++ ++E + T IQAQ++P L G+D++G +TGSGKTAAF + ++
Sbjct: 5 SFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVLS 64
Query: 182 HC-VAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRS 240
+ V + V ALVL PTRELA Q+ +++ L R++ + K + GG + Q
Sbjct: 65 NLNVKRFRVQ------ALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIG 118
Query: 241 ELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDK 300
L G I+V TPGR LDHL + LS ++ ++LDEADRML+MGF+ + ++ P +
Sbjct: 119 SLEHGAHILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAE 178
Query: 301 HQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXX 360
QTLLFSAT P IE +AQ + + +KV + + T+++ Q KV + D
Sbjct: 179 RQTLLFSATYPASIEQIAQSVTRNALMIKV-EATHDTSSIRQYFYKVEGSAARDEALETL 237
Query: 361 XXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDF 420
H ++VF K V++AL G + LHG Q +R+ AL F
Sbjct: 238 LLH--------HQPTSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQF 289
Query: 421 RNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
N S +ILVATDVA+RGLDV + V N DL +
Sbjct: 290 ANKSISILVATDVAARGLDVDNLDAVFNYDLSR 322
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 119/340 (35%), Positives = 187/340 (55%)
Query: 113 SVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKT 172
+V P + +F + L +++ + +T T IQA +P L+G+D+LG A+TG+GKT
Sbjct: 8 TVTEPEAV-AFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKT 66
Query: 173 AAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGG 232
AAF +P + T + + P +VLAPTRELA Q+ + +++ + + + A + GG
Sbjct: 67 AAFGLPALAKI--DTSIKK---PQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGG 121
Query: 233 TNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIRE 292
+ Q +L G +VV TPGR +DHL++ + L + +LDEAD ML+MGF I+
Sbjct: 122 QSYGPQFQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQW 181
Query: 293 VMQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEK 352
++ ++P Q LFSATMP I +A +L DP +KV V AN+ Q KVS K
Sbjct: 182 ILDHIPKTAQMCLFSATMPPAIRKIANRFLKDPEHIKVAAVKKAKANITQYAWKVSGITK 241
Query: 353 VDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSD 412
+ + I+FV + +++E L G A+AL+G NQ+
Sbjct: 242 MTALERIAEVVE---------YDAMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQ 292
Query: 413 RESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
RE + ++G ++ILVATDV +RGLD+ ++ V+N DLP
Sbjct: 293 RERCIDQMKSGKSSILVATDVVARGLDIPRISLVINYDLP 332
>POMBASE|SPCC63.11 [details] [associations]
symbol:prp28 "U5 snRNP-associated protein Prp28
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC63.11
GO:GO:0005524 GO:GO:0005737 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0000354 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE OrthoDB:EOG4KPXK0 PIR:T41512 RefSeq:NP_587984.1
ProteinModelPortal:Q9Y7T7 STRING:Q9Y7T7 EnsemblFungi:SPCC63.11.1
GeneID:2538728 KEGG:spo:SPCC63.11 NextBio:20799913 Uniprot:Q9Y7T7
Length = 662
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 131/366 (35%), Positives = 197/366 (53%)
Query: 103 LNVDVTVASGSVPAPAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLL 162
L D ++ P P+ ++ + L ++K ++ Y P+SIQ A+PV L +DL+
Sbjct: 231 LKEDYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLI 290
Query: 163 GCAETGSGKTAAFTIPMIQHCVAQTPVGRGD---GPLALVLAPTRELAQQIEKEVKALSR 219
G AETGSGKTAAF IP+I P+ + GP A+VLAPTRELAQQI+ E +
Sbjct: 291 GIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAE 350
Query: 220 SLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEAD 279
L F+ VVGG EQ ++ G IVVATPGR LD L++ LS+ ++V++DEAD
Sbjct: 351 PL-GFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEAD 409
Query: 280 RMLDMGFEPQIREVMQNLP-----DKHQTLLFSATMPVEIEALAQEYLTDPVQVK----- 329
RMLDMGFE + +++ +LP +K ++L +A T P +V
Sbjct: 410 RMLDMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPRVANLAKS 469
Query: 330 --VGKVSSPTANVIQILEKVSENEKVDRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRC 387
+ V N+ Q +++V + ++ +S P I+FV K
Sbjct: 470 YLIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVEEILESNRFSPPIIIFVNLKRNI 529
Query: 388 DEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVV 447
+ +++ L A G HAV LHG ++Q RE A+ RN + +ILVATD+A RG+D+ V+ V+
Sbjct: 530 EAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTADILVATDIAGRGIDIPNVSLVL 589
Query: 448 NLDLPK 453
N ++ K
Sbjct: 590 NYNMAK 595
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 118/332 (35%), Positives = 187/332 (56%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F+ + L ++K++ Y + T IQA+ +P L G+D++G A+TGSGKTAAF + ++
Sbjct: 11 AFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAFGLALLN 70
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
+ R ++V+ PTRELA Q+ KE++ L+R + + K + GGT Q
Sbjct: 71 KL--EVKKFRIQ---SMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIGS 125
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L G ++V TPGR +H+ +G L ++ ++LDEADRML+MGF+ + ++ P
Sbjct: 126 LEHGAHVIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPLDR 185
Query: 302 QTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXX 361
QTLLFSAT P +I+++++ +TDPV VK+ S + + Q KV ++ DR
Sbjct: 186 QTLLFSATFPDQIKSISESIMTDPVMVKIAS-SEDQSTISQKFFKVGNDD--DRLDALRL 242
Query: 362 XXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFR 421
+S T +F K +V++AL +G +ALHG Q DR+ L F
Sbjct: 243 LLLGNQVES------TAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFA 296
Query: 422 NGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
N S +ILVATDVA+RGLD+ + V+N + +
Sbjct: 297 NKSASILVATDVAARGLDIDSLDLVINYHIAR 328
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 119/340 (35%), Positives = 181/340 (53%)
Query: 116 APAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAF 175
A + + SF ++ + + + Y PT +QA +P LSGRD+L A TGSGKTAAF
Sbjct: 4 ASSSVASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAF 63
Query: 176 TIPMIQHCVAQTPVGRGDGPL-ALVLAPTRELAQQIEKEVKALSRSLDS-FKTAIVVGGT 233
+P++Q + G + LVL PTRELAQQ+ + + + K GG
Sbjct: 64 ALPLLQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGV 123
Query: 234 NIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREV 293
++ Q LR G ++VATPGR LD L L++VS +LDEADRML +GF ++ +V
Sbjct: 124 SVNLQMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQV 183
Query: 294 MQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKV 353
+ LP + QTLLFSAT P E+ AL + L P++ + S + + Q + V+ +K
Sbjct: 184 LAALPRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQ--SEQESTIEQRVITVNREQKT 241
Query: 354 DRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDR 413
K H + ++FV K C+ +++ L G+ A HG + Q R
Sbjct: 242 --------ALLAHLIKQ-HQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGAR 292
Query: 414 ESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
L F+NG ++L+ATD+A+RG+D+ + V+N DLP+
Sbjct: 293 TRVLDGFKNGEISVLIATDIAARGIDIDKLPVVINFDLPR 332
>UNIPROTKB|Q8EDC4 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 119/333 (35%), Positives = 183/333 (54%)
Query: 123 FTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQH 182
FTD L +++ ++ PT+IQ QA+P+AL+G+DL+ ++TGSGKT AF +P +Q
Sbjct: 3 FTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQR 62
Query: 183 CVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL 242
++ + + D P L+L PTRELA Q+ +++ L + +K V+GG N +Q L
Sbjct: 63 VISTRALSKRD-PRVLILLPTRELAHQVYSQLRLLVANTQ-YKAISVLGGENFNDQAKAL 120
Query: 243 RGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH- 301
+VATPGR DHL+Q N L+ + +ILDEADRMLD+GF PQ++ + + K
Sbjct: 121 AKEPHFIVATPGRIADHLEQKNLFLNGLELLILDEADRMLDLGFAPQLKAINEAADHKRR 180
Query: 302 QTLLFSATMP-VEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXX 360
QTL+FSAT+ EI +A L +P+ V +G + ++ Q ++ + +D
Sbjct: 181 QTLMFSATLDHSEINEIAAALLKNPLHVAIGTAHAEHQDISQ---RIYLCDHLDHKEALL 237
Query: 361 XXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDF 420
H I+F + + ++ L A+G AL G Q+ R + F
Sbjct: 238 SRLLSDES---HK--QVIIFTATRADTERLAAKLSAQGFATAALSGELKQAARNQIMDQF 292
Query: 421 RNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
G ILV TDVASRGLD++ V+ V+N D+PK
Sbjct: 293 ARGQQQILVTTDVASRGLDLLNVSLVINFDMPK 325
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 119/331 (35%), Positives = 184/331 (55%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
SF+ + L +++ + Y +PT IQ QA+PV L GRDL+ A+TG+GKTA+F +P+++
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
+ Q R AL+L PTRELA Q+ ++V+ + K+ V GG + Q+
Sbjct: 62 K-LRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDT-GLKSLAVFGGVDEQAQKQR 119
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L GV ++VATPGR +D Q + V+LDEADRMLDMGF I +++ LP +
Sbjct: 120 LIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEV 179
Query: 302 QTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXX 361
Q LLFSAT+ ++ LA+ + DP ++ + + +N+ Q L V ++ K
Sbjct: 180 QFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTK--------- 230
Query: 362 XXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFR 421
+ + ++F+E K ++ L G+HA A H GR+Q+ R L DF+
Sbjct: 231 SALLSHLINEQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFK 290
Query: 422 NGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+G LVAT VA+RG+D+ ++ VVN DLP
Sbjct: 291 SGKIKYLVATGVAARGIDIDQLSRVVNYDLP 321
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 118/332 (35%), Positives = 187/332 (56%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
+F+ + L ++K++ Y + T IQA+ +P L G+D++G A+TGSGKTAAF + ++
Sbjct: 11 AFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAFGLALLN 70
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
+ R ++V+ PTRELA Q+ KE++ L+R + + K + GGT Q
Sbjct: 71 KL--EVKKFRIQ---SMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIGS 125
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L G ++V TPGR +H+ +G L ++ ++LDEADRML+MGF+ + ++ P
Sbjct: 126 LEHGAHVIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPLDR 185
Query: 302 QTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXX 361
QTLLFSAT P +I+++++ +TDPV VK+ S + + Q KV ++ DR
Sbjct: 186 QTLLFSATFPDQIKSISESIMTDPVMVKIAS-SEDQSTISQKFFKVGNDD--DRLDALRL 242
Query: 362 XXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFR 421
+S T +F K +V++AL +G +ALHG Q DR+ L F
Sbjct: 243 LLLGNQVES------TAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFA 296
Query: 422 NGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
N S +ILVATDVA+RGLD+ + V+N + +
Sbjct: 297 NKSASILVATDVAARGLDIDSLDLVINYHIAR 328
>TIGR_CMR|SO_2838 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 119/333 (35%), Positives = 183/333 (54%)
Query: 123 FTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQH 182
FTD L +++ ++ PT+IQ QA+P+AL+G+DL+ ++TGSGKT AF +P +Q
Sbjct: 3 FTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQR 62
Query: 183 CVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL 242
++ + + D P L+L PTRELA Q+ +++ L + +K V+GG N +Q L
Sbjct: 63 VISTRALSKRD-PRVLILLPTRELAHQVYSQLRLLVANTQ-YKAISVLGGENFNDQAKAL 120
Query: 243 RGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH- 301
+VATPGR DHL+Q N L+ + +ILDEADRMLD+GF PQ++ + + K
Sbjct: 121 AKEPHFIVATPGRIADHLEQKNLFLNGLELLILDEADRMLDLGFAPQLKAINEAADHKRR 180
Query: 302 QTLLFSATMP-VEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXX 360
QTL+FSAT+ EI +A L +P+ V +G + ++ Q ++ + +D
Sbjct: 181 QTLMFSATLDHSEINEIAAALLKNPLHVAIGTAHAEHQDISQ---RIYLCDHLDHKEALL 237
Query: 361 XXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDF 420
H I+F + + ++ L A+G AL G Q+ R + F
Sbjct: 238 SRLLSDES---HK--QVIIFTATRADTERLAAKLSAQGFATAALSGELKQAARNQIMDQF 292
Query: 421 RNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
G ILV TDVASRGLD++ V+ V+N D+PK
Sbjct: 293 ARGQQQILVTTDVASRGLDLLNVSLVINFDMPK 325
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 119/340 (35%), Positives = 181/340 (53%)
Query: 116 APAPIESFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAF 175
A + + SF ++ + + + Y PT +QA +P LSGRD+L A TGSGKTAAF
Sbjct: 4 ASSSVASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAF 63
Query: 176 TIPMIQHCVAQTPVGRGDGPL-ALVLAPTRELAQQIEKEVKALSRSLDS-FKTAIVVGGT 233
+P++Q + G + LVL PTRELAQQ+ + + + K GG
Sbjct: 64 ALPLLQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGV 123
Query: 234 NIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREV 293
++ Q LR G ++VATPGR LD L L++VS +LDEADRML +GF ++ +V
Sbjct: 124 SVNLQMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQV 183
Query: 294 MQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKV 353
+ LP + QTLLFSAT P E+ AL + L P++ + S + + Q + V+ +K
Sbjct: 184 LAALPRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQ--SEQESTIEQRVITVNREQKT 241
Query: 354 DRXXXXXXXXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDR 413
K H + ++FV K C+ +++ L G+ A HG + Q R
Sbjct: 242 --------ALLAHLIKQ-HQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGAR 292
Query: 414 ESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK 453
L F+NG ++L+ATD+A+RG+D+ + V+N DLP+
Sbjct: 293 TRVLDGFKNGEISVLIATDIAARGIDIDKLPVVINFDLPR 332
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 119/331 (35%), Positives = 184/331 (55%)
Query: 122 SFTDMCLHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQ 181
SF+ + L +++ + Y +PT IQ QA+PV L GRDL+ A+TG+GKTA+F +P+++
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
Query: 182 HCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSE 241
+ Q R AL+L PTRELA Q+ ++V+ + K+ V GG + Q+
Sbjct: 62 K-LRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDT-GLKSLAVFGGVDEQAQKQR 119
Query: 242 LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 301
L GV ++VATPGR +D Q + V+LDEADRMLDMGF I +++ LP +
Sbjct: 120 LIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEV 179
Query: 302 QTLLFSATMPVEIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXX 361
Q LLFSAT+ ++ LA+ + DP ++ + + +N+ Q L V ++ K
Sbjct: 180 QFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTK--------- 230
Query: 362 XXXXXXXKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFR 421
+ + ++F+E K ++ L G+HA A H GR+Q+ R L DF+
Sbjct: 231 SALLSHLINEQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFK 290
Query: 422 NGSTNILVATDVASRGLDVMGVAHVVNLDLP 452
+G LVAT VA+RG+D+ ++ VVN DLP
Sbjct: 291 SGKIKYLVATGVAARGIDIDQLSRVVNYDLP 321
>WB|WBGene00001599 [details] [associations]
symbol:glh-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 529 (191.3 bits), Expect = 5.0e-50, P = 5.0e-50
Identities = 124/379 (32%), Positives = 202/379 (53%)
Query: 91 FNPEQIEEVRLR---LNVDVTVASGSVPAPAPI-ESFTDMCLHPSIMKDIEFHEYTRPTS 146
FN ++I E + + +V + S P ++F++ L ++ K++ YT+ T
Sbjct: 518 FNMQKISEGLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTP 577
Query: 147 IQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGR-GDG---PLALVLAP 202
IQ +P+ G D++ CA+TGSGKTAAF +P++ + + + G+G P ++L P
Sbjct: 578 IQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTP 637
Query: 203 TRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQ 262
TREL QI E + + + V GG + + ++ G +I+V T GR ++
Sbjct: 638 TRELTDQIYNEGRKFAYQT-MMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEE 696
Query: 263 GNTSLSRVSFVILDEADRMLD-MGFEPQIREVM--QNLPDKH--QTLLFSATMPVEIEAL 317
G L + F +LDEADRM+D MGF I ++ +++P K QTL+FSAT P ++
Sbjct: 697 GTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEA 756
Query: 318 AQEYLTDP-VQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXX--XXXXXKSCHPF 374
A+ +L + + + + K+ + V+Q EK +EK D+ K+ +
Sbjct: 757 ARNHLKEGYIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVY 816
Query: 375 PL-TIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDV 433
TIVFV ++ D ++ L + + A+ +HG R Q +R ALR FRNGS +L+AT V
Sbjct: 817 TKKTIVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAV 876
Query: 434 ASRGLDVMGVAHVVNLDLP 452
A RGLD+ GV HV+N D+P
Sbjct: 877 AERGLDIKGVDHVINYDMP 895
>UNIPROTKB|Q966L9 [details] [associations]
symbol:glh-2 "ATP-dependent RNA helicase glh-2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 529 (191.3 bits), Expect = 5.0e-50, P = 5.0e-50
Identities = 124/379 (32%), Positives = 202/379 (53%)
Query: 91 FNPEQIEEVRLR---LNVDVTVASGSVPAPAPI-ESFTDMCLHPSIMKDIEFHEYTRPTS 146
FN ++I E + + +V + S P ++F++ L ++ K++ YT+ T
Sbjct: 518 FNMQKISEGLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTP 577
Query: 147 IQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGR-GDG---PLALVLAP 202
IQ +P+ G D++ CA+TGSGKTAAF +P++ + + + G+G P ++L P
Sbjct: 578 IQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTP 637
Query: 203 TRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQ 262
TREL QI E + + + V GG + + ++ G +I+V T GR ++
Sbjct: 638 TRELTDQIYNEGRKFAYQT-MMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEE 696
Query: 263 GNTSLSRVSFVILDEADRMLD-MGFEPQIREVM--QNLPDKH--QTLLFSATMPVEIEAL 317
G L + F +LDEADRM+D MGF I ++ +++P K QTL+FSAT P ++
Sbjct: 697 GTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEA 756
Query: 318 AQEYLTDP-VQVKVGKVSSPTANVIQILEKVSENEKVDRXXXXXXXX--XXXXXKSCHPF 374
A+ +L + + + + K+ + V+Q EK +EK D+ K+ +
Sbjct: 757 ARNHLKEGYIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVY 816
Query: 375 PL-TIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDV 433
TIVFV ++ D ++ L + + A+ +HG R Q +R ALR FRNGS +L+AT V
Sbjct: 817 TKKTIVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAV 876
Query: 434 ASRGLDVMGVAHVVNLDLP 452
A RGLD+ GV HV+N D+P
Sbjct: 877 AERGLDIKGVDHVINYDMP 895
WARNING: HSPs involving 680 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 503 438 0.00088 118 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 930
No. of states in DFA: 612 (65 KB)
Total size of DFA: 242 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.37u 0.10s 36.47t Elapsed: 00:00:01
Total cpu time: 36.43u 0.10s 36.53t Elapsed: 00:00:01
Start: Sat May 11 05:08:06 2013 End: Sat May 11 05:08:07 2013
WARNINGS ISSUED: 2