Query 010710
Match_columns 503
No_of_seqs 225 out of 1477
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 03:41:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010710.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010710hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2067 Mitochondrial processi 100.0 4E-81 8.7E-86 578.6 37.0 428 72-503 21-460 (472)
2 KOG0960 Mitochondrial processi 100.0 1.1E-62 2.4E-67 455.5 38.8 422 74-502 32-464 (467)
3 COG0612 PqqL Predicted Zn-depe 100.0 6.7E-50 1.5E-54 409.6 42.6 399 75-486 16-428 (438)
4 TIGR02110 PQQ_syn_pqqF coenzym 100.0 2.5E-43 5.5E-48 367.8 41.3 328 78-422 2-345 (696)
5 PRK15101 protease3; Provisiona 100.0 7.5E-42 1.6E-46 382.7 41.0 396 74-486 42-458 (961)
6 KOG2583 Ubiquinol cytochrome c 100.0 1.7E-36 3.6E-41 282.7 37.7 405 75-496 22-429 (429)
7 PTZ00432 falcilysin; Provision 100.0 1.8E-34 3.9E-39 320.1 41.2 400 75-491 91-575 (1119)
8 PRK15101 protease3; Provisiona 100.0 2.8E-34 6.1E-39 321.8 40.4 408 52-486 496-924 (961)
9 COG1025 Ptr Secreted/periplasm 100.0 2.7E-30 5.9E-35 267.6 37.8 403 72-493 20-444 (937)
10 KOG0959 N-arginine dibasic con 100.0 6.6E-29 1.4E-33 261.9 37.5 398 74-486 26-443 (974)
11 COG1025 Ptr Secreted/periplasm 99.9 1.1E-24 2.4E-29 226.1 36.2 409 52-486 475-902 (937)
12 KOG0959 N-arginine dibasic con 99.9 2.3E-22 5E-27 212.7 37.5 403 50-479 480-910 (974)
13 COG1026 Predicted Zn-dependent 99.9 1.1E-21 2.4E-26 204.8 30.8 393 75-485 21-452 (978)
14 COG1026 Predicted Zn-dependent 99.9 9.1E-21 2E-25 198.0 30.6 395 67-486 519-955 (978)
15 PF00675 Peptidase_M16: Insuli 99.9 1E-21 2.2E-26 170.6 15.9 146 86-231 1-148 (149)
16 PF05193 Peptidase_M16_C: Pept 99.9 4.5E-21 9.8E-26 172.4 17.2 173 237-423 1-184 (184)
17 PTZ00432 falcilysin; Provision 99.9 6.9E-19 1.5E-23 196.3 32.8 381 80-486 664-1100(1119)
18 KOG0961 Predicted Zn2+-depende 99.8 6.1E-18 1.3E-22 167.8 27.8 396 83-499 28-466 (1022)
19 KOG2019 Metalloendoprotease HM 99.8 7.1E-17 1.5E-21 160.5 28.3 400 76-493 54-498 (998)
20 KOG2019 Metalloendoprotease HM 99.8 1E-16 2.2E-21 159.5 26.2 382 77-486 562-979 (998)
21 KOG0961 Predicted Zn2+-depende 99.3 9.1E-11 2E-15 117.5 19.3 391 89-501 555-997 (1022)
22 PF08367 M16C_assoc: Peptidase 98.6 1.1E-06 2.4E-11 82.6 13.9 132 67-201 62-207 (248)
23 PF03410 Peptidase_M44: Protei 97.9 0.00043 9.3E-09 67.9 15.5 185 79-285 2-195 (590)
24 PHA03081 putative metalloprote 97.8 0.0007 1.5E-08 66.5 14.5 186 79-284 2-194 (595)
25 TIGR02110 PQQ_syn_pqqF coenzym 97.5 0.011 2.4E-07 63.4 20.1 169 303-491 19-195 (696)
26 COG0612 PqqL Predicted Zn-depe 97.5 0.0022 4.8E-08 66.0 14.1 172 303-492 36-209 (438)
27 PF00675 Peptidase_M16: Insuli 96.2 0.41 8.9E-06 40.9 15.9 130 302-451 9-140 (149)
28 KOG0960 Mitochondrial processi 96.1 0.14 2.9E-06 49.8 13.1 177 84-264 258-450 (467)
29 KOG2067 Mitochondrial processi 95.6 0.21 4.6E-06 48.6 12.1 162 96-262 264-442 (472)
30 PF05193 Peptidase_M16_C: Pept 85.6 7 0.00015 33.9 9.5 108 84-196 67-184 (184)
31 PF09851 SHOCT: Short C-termin 82.8 2.4 5.2E-05 25.4 3.4 26 399-424 5-30 (31)
32 KOG2583 Ubiquinol cytochrome c 82.2 41 0.0009 33.3 13.3 165 300-485 38-205 (429)
33 COG5023 Tubulin [Cytoskeleton] 76.3 32 0.00069 33.8 10.4 148 342-501 140-318 (443)
34 KOG1374 Gamma tubulin [Cytoske 73.8 4.7 0.0001 39.3 4.3 169 326-499 118-324 (448)
35 PF08367 M16C_assoc: Peptidase 62.6 1.3E+02 0.0029 28.0 13.1 117 301-430 87-209 (248)
36 PF01729 QRPTase_C: Quinolinat 34.6 51 0.0011 28.8 3.7 42 233-274 104-147 (169)
37 PF05120 GvpG: Gas vesicle pro 27.2 2.2E+02 0.0047 21.4 5.4 34 396-429 34-67 (79)
38 cd05026 S-100Z S-100Z: S-100Z 26.4 3E+02 0.0065 21.1 6.9 77 388-465 2-83 (93)
39 COG0012 Predicted GTPase, prob 24.8 5.4E+02 0.012 25.7 9.1 133 346-493 84-221 (372)
40 PRK11032 hypothetical protein; 24.5 1.5E+02 0.0032 25.7 4.6 37 391-430 26-62 (160)
41 PF07295 DUF1451: Protein of u 22.4 2.6E+02 0.0056 23.8 5.7 44 388-434 13-56 (146)
42 COG0157 NadC Nicotinate-nucleo 22.0 1.8E+02 0.0039 27.6 5.1 44 231-274 210-254 (280)
43 COG3462 Predicted membrane pro 20.9 1.5E+02 0.0032 23.6 3.5 23 401-423 93-115 (117)
44 cd04922 ACT_AKi-HSDH-ThrA_2 AC 20.7 2.5E+02 0.0055 19.2 4.8 46 135-180 19-65 (66)
45 PRK06851 hypothetical protein; 20.6 1.8E+02 0.0039 29.1 5.1 45 328-373 20-67 (367)
46 PF00531 Death: Death domain; 20.6 3.5E+02 0.0075 19.7 7.8 60 411-477 24-83 (83)
47 PRK06978 nicotinate-nucleotide 20.2 2E+02 0.0044 27.7 5.1 41 232-274 228-269 (294)
48 PF14659 Phage_int_SAM_3: Phag 20.2 86 0.0019 21.1 2.1 17 461-477 42-58 (58)
No 1
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4e-81 Score=578.58 Aligned_cols=428 Identities=45% Similarity=0.707 Sum_probs=410.0
Q ss_pred CCCceEEEEcCCCcEEEEecCCCCeEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCCHHHHHHHHHHcCCeeeEe
Q 010710 72 EPGKVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILAS 151 (503)
Q Consensus 72 ~~~~~~~~~L~NG~~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s~~~l~~~l~~~g~~~~~~ 151 (503)
++..+++++|+||+||++++++++.++++++|++|+++|.+...|++|++++|+|++|.+++..++.+.||.+||+++|+
T Consensus 21 ~~~~~kvttL~NGlkvase~~pg~f~~vGlyIdsGsrYE~~~~~GisH~lerLAF~ST~~~~~~ei~~~LE~~GGn~~cq 100 (472)
T KOG2067|consen 21 EPSNTKVTTLPNGLKVASENTPGQFCTVGLYIDSGSRYEAKYFSGISHFLERLAFKSTERFSSKEILAELEKLGGNCDCQ 100 (472)
T ss_pred ccccceeeecCCccEEeccCCCCCceEEEEEEecCccccCcCcccHHHHHHHHhhccccCCcHHHHHHHHHHhCCccccc
Confidence 55689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccceEEEEEecccCCHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHhHhhhCChHHHHHHHHHHHhc-CCCCCCCCCC
Q 010710 152 ASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGY-AGALGNPLLA 230 (503)
Q Consensus 152 ~~~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~ 230 (503)
++||.+.|.+++.+++++.++++|+|.+.+|.|++|+++.++..++-|+.+...+|+..+.+.+|.++| ++.++.|..+
T Consensus 101 sSRetm~Yaas~~~~~v~sm~~lLadtV~~P~~~d~ev~~~~~~v~~E~~el~~~Pe~lL~e~iH~Aay~~ntlg~pl~c 180 (472)
T KOG2067|consen 101 SSRETMMYAASADSDGVDSMVELLADTVLNPKFTDQEVEEARRAVKYEIEELWMRPEPLLTEMIHSAAYSGNTLGLPLLC 180 (472)
T ss_pred ccHhhhHHHHHhhhcccHHHHHHHHHHHhcccccHHHHHHHHHhhhheccccccCchhhHHHHHHHHHhccCcccccccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 8899999999
Q ss_pred ChhhhcCCCHHHHHHHHHhhcCCCCeEEEEeCCChHHHHHHHHhhcCCCCCCCCCCC--CCCCccCCceEEcCC------
Q 010710 231 PESALNRLDGTILEEIVAENFTAPRMVLAASGVDLDELLPIAEPLLSDLPRLPPPTE--PKSVYIGGDYRQQAD------ 302 (503)
Q Consensus 231 ~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G~~~~~l~~l~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~------ 302 (503)
+.+.+++|+.+.|.+|.+.+|+|.||++..+|++||++++++++++++||+...++. ++.+|.|+...++.+
T Consensus 181 p~~~i~~I~~~~l~~yl~~~ytp~rmVlA~vGV~heelv~~~~~~~~~~~s~~~p~i~~~~aQYtGG~~~~~~d~~~~~~ 260 (472)
T KOG2067|consen 181 PEENIDKINREVLEEYLKYFYTPERMVLAGVGVEHEELVEIAEKLLGDLPSTKVPPIDESKAQYTGGELKIDTDAPQVTG 260 (472)
T ss_pred ChhhhhhhhHHHHHHHHHhcCChhheEeeecCCCHHHHHHHHHHHhccCCccCCCCcccchhhccccccccCCCCccccC
Confidence 999999999999999999999999999999999999999999999999998644443 557899997665433
Q ss_pred -CCceEEEEEeeeCCCCCCCchhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEeeeccccCcceEE
Q 010710 303 -SPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIFNNTGLFG 381 (503)
Q Consensus 303 -~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~~~~Y~~~a~~~~~~~~~~f~ 381 (503)
.+-+|++++|++++ ++++|.+++.+|+.+||||||||||||||||+||||.++.++++|.|++.|++..|.++|+|+
T Consensus 261 g~EltHv~lg~Eg~~--~~deD~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sctAfnhsy~DtGlfg 338 (472)
T KOG2067|consen 261 GPELTHVVLGFEGCS--WNDEDFVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSCTAFNHSYSDTGLFG 338 (472)
T ss_pred ccceeeeeEeeccCC--CCChhHHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHhhhhhccccCCceeE
Confidence 36899999999997 688899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHhCCcCCHHHHHHHH
Q 010710 382 IYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLESRVIVSEDIGRQILTYGERKSVDQFLSVL 461 (503)
Q Consensus 382 i~~~~~p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i 461 (503)
|+.+++|+++.+++..+.+|+..+.. | ++++|++|||+++++.++||++++....++++||++.+|.++.++++++.|
T Consensus 339 i~~s~~P~~a~~aveli~~e~~~~~~-~-v~~~el~RAK~qlkS~LlMNLESR~V~~EDvGRQVL~~g~rk~p~e~~~~I 416 (472)
T KOG2067|consen 339 IYASAPPQAANDAVELIAKEMINMAG-G-VTQEELERAKTQLKSMLLMNLESRPVAFEDVGRQVLTTGERKPPDEFIKKI 416 (472)
T ss_pred EeccCCHHHHHHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHHHhcccccchhHHHHhHHHHhccCcCCHHHHHHHH
Confidence 99999999999999999999999877 4 999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHhhcCCceEEEE--ccCCCCHHHHHhHhhcC
Q 010710 462 EHITLDDITNIAQKIISSPLTMASY--VINVPGYESVSSKFHAK 503 (503)
Q Consensus 462 ~~vT~~di~~~a~~~l~~~~~~~~~--~~~~p~~~~~~~~~~~~ 503 (503)
+++|++||+++++++|..+++++.+ +.++|+|+.|.+++++|
T Consensus 417 e~lt~~DI~rva~kvlt~~p~va~~Gd~~~lpt~~~i~~~~~~~ 460 (472)
T KOG2067|consen 417 EQLTPSDISRVASKVLTGKPSVAAFGDGTGLPTYDHIGNAVSSG 460 (472)
T ss_pred HhcCHHHHHHHHHHHhcCCceeccCCcccCCcchhhhhhhcccC
Confidence 9999999999999999999999999 99999999999998874
No 2
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-62 Score=455.48 Aligned_cols=422 Identities=32% Similarity=0.548 Sum_probs=395.8
Q ss_pred CceEEEEcCCCcEEEEecCCCCeEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCCHHHHHHHHHHcCCeeeEeec
Q 010710 74 GKVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASAS 153 (503)
Q Consensus 74 ~~~~~~~L~NG~~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~~ 153 (503)
|++++++|+||++|..+++....+++++||++|+++|++++.|.+|++|||+|+||++++...+..+++.+|+.+|++++
T Consensus 32 P~t~vttL~NGlrVaTE~~~a~TATVGVwidaGSR~EnekNNG~ahFLEhlaFKGT~~Rs~~alElEieniGahLNAytS 111 (467)
T KOG0960|consen 32 PETEVTTLPNGLRVATEHNSASTATVGVWIDAGSRFENEKNNGTAHFLEHLAFKGTKNRSQAALELEIENIGAHLNAYTS 111 (467)
T ss_pred CcceEEEcCCCcEEEeccCCCcceEEEEEeccCccccccccccHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHhccccc
Confidence 57799999999999999887789999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEecccCCHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHhHhhhCChHHHHHHHHHHHhc-CCCCCCCCCCCh
Q 010710 154 REQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGY-AGALGNPLLAPE 232 (503)
Q Consensus 154 ~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~ 232 (503)
|+++.|.++++++++++++++|.|.+++..+.+.+++++|+.+.+|.++...+-.+.+++.+|...| ++|++.+.+|+.
T Consensus 112 ReqT~yyakal~~dv~kavdiLaDIlqns~L~~s~IerER~vILrEmqevd~~~~eVVfdhLHatafQgtPL~~tilGp~ 191 (467)
T KOG0960|consen 112 REQTVYYAKALSKDVPKAVDILADILQNSKLEESAIERERDVILREMQEVDKNHQEVVFDHLHATAFQGTPLGRTILGPS 191 (467)
T ss_pred ccceeeehhhccccchHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCcccccccChh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred hhhcCCCHHHHHHHHHhhcCCCCeEEEEeC-CChHHHHHHHHhhcCCCCCCCC---CC-CCCCCccCCceEEcCC-CCce
Q 010710 233 SALNRLDGTILEEIVAENFTAPRMVLAASG-VDLDELLPIAEPLLSDLPRLPP---PT-EPKSVYIGGDYRQQAD-SPET 306 (503)
Q Consensus 233 ~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~l~~~~~~~l~~~~~---~~-~~~~~~~~~~~~~~~~-~~~~ 306 (503)
+.|++|+..||++|.+.||.++||+++.+| ++||++.+++++||++++.... ++ .+++.|.|.+.+...| .|.+
T Consensus 192 enI~si~r~DL~~yi~thY~~~RmVlaaaGgV~He~lv~la~k~fg~~~~~~~~~~~~~~~~~~FtgsEvR~rdd~lP~a 271 (467)
T KOG0960|consen 192 ENIKSISRADLKDYINTHYKASRMVLAAAGGVKHEELVKLAEKYFGDLSKLQTGDKVPLVPPARFTGSEVRVRDDDLPLA 271 (467)
T ss_pred hhhhhhhHHHHHHHHHhcccCccEEEEecCCcCHHHHHHHHHHHcCCCcccccCcCCCCCCCccccCceeeecCCCCchh
Confidence 999999999999999999999999999999 9999999999999999774322 22 2345688998887654 8999
Q ss_pred EEEEEeeeCCCCCCCchhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEeeeccccCcceEEEEEEe
Q 010710 307 HIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYACT 386 (503)
Q Consensus 307 ~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~~~~Y~~~a~~~~~~~~~~f~i~~~~ 386 (503)
++++++++.+ +.++|+.++.|.+.|+|....+-.||+-.+ ++|-+.+-+. +++.++.+|+.+|.++|+|++|+.|
T Consensus 272 ~~AiAVEG~~--w~~pD~~~l~van~iiG~wdr~~g~g~~~~--s~La~~~~~~-~l~~sfqsFnt~YkDTGLwG~y~V~ 346 (467)
T KOG0960|consen 272 HIAIAVEGVS--WAHPDYFALMVANTIIGNWDRTEGGGRNLS--SRLAQKIQQD-QLCHSFQSFNTSYKDTGLWGIYFVT 346 (467)
T ss_pred heeeeEecCC--cCCccHHHHHHHHHHhhhhhcccCCccCCc--cHHHHHHHHH-HHHHHHhhhhcccccccceeEEEEe
Confidence 9999999997 599999999999999998887777777766 9999888876 6788999999999999999999999
Q ss_pred -CcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHhCCcCCHHHHHHHHccCC
Q 010710 387 -GSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLESRVIVSEDIGRQILTYGERKSVDQFLSVLEHIT 465 (503)
Q Consensus 387 -~p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~vT 465 (503)
++..++.++..+++++.++.. .+|+.|++|||++++..+...++...-.+++++++++.+|++.+..++.++|++||
T Consensus 347 ~~~~~iddl~~~vl~eW~rL~~--~vteaEV~RAKn~Lkt~Lll~ldgttpi~ediGrqlL~~Grri~l~El~~rId~vt 424 (467)
T KOG0960|consen 347 DNLTMIDDLIHSVLKEWMRLAT--SVTEAEVERAKNQLKTNLLLSLDGTTPIAEDIGRQLLTYGRRIPLAELEARIDAVT 424 (467)
T ss_pred cChhhHHHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHhhcCCcCChHHHHHHHhhcc
Confidence 899999999999999999988 59999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhc-CCceEEEE--ccCCCCHHHHHhHhhc
Q 010710 466 LDDITNIAQKIIS-SPLTMASY--VINVPGYESVSSKFHA 502 (503)
Q Consensus 466 ~~di~~~a~~~l~-~~~~~~~~--~~~~p~~~~~~~~~~~ 502 (503)
.+||++++.+|+. .+++++++ +..+|.|..|++.|.+
T Consensus 425 ~~~Vr~va~k~iyd~~iAia~vG~ie~lpdy~~irs~m~w 464 (467)
T KOG0960|consen 425 AKDVREVASKYIYDKDIAIAAVGPIEGLPDYNRIRSGMSW 464 (467)
T ss_pred HHHHHHHHHHHhhcCCcceeeecccccCchHHHHhccchh
Confidence 9999999999997 57899999 9999999999998865
No 3
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=6.7e-50 Score=409.56 Aligned_cols=399 Identities=27% Similarity=0.451 Sum_probs=348.0
Q ss_pred ceEEEEcCCCcEEEEecCC-CCeEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCCHHHHHHHHHHcCCeeeEeec
Q 010710 75 KVKVTTLENGIRIASETSV-SPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASAS 153 (503)
Q Consensus 75 ~~~~~~L~NG~~v~~~~~~-~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~~ 153 (503)
.++..+|+||++++..+++ .+.+++.+++++|+.+|++...|++|+++||+|+||.+++..++.+.++..|+..|++++
T Consensus 16 ~~~~~~L~nGl~~~~~~~~~~~~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~~~~~~~i~~~~~~~G~~~na~ts 95 (438)
T COG0612 16 GLQVFTLPNGLRVITYPNPTAPTVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPSAELAEAFEKLGGQLNAFTS 95 (438)
T ss_pred cceEEEcCCCCEEEEEeCCCCCEEEEEEEEeecccCCCCCcccHHHHHHHHHccCCCCCChHHHHHHHHHhcCeeecccc
Confidence 5899999999999987777 689999999999999999999999999999999999998888999999999999999999
Q ss_pred cceEEEEEecccCCHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHhHhhhCChHHHHHHHHHHHhc-CCCCCCCCCCCh
Q 010710 154 REQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGY-AGALGNPLLAPE 232 (503)
Q Consensus 154 ~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~ 232 (503)
.+.+.|.+++++++++.+|+++.+++.+|.|++++|+++|..+.+|++....+|...+.+.++..+| +|||+++..|+.
T Consensus 96 ~d~t~y~~~~l~~~~~~~l~llad~l~~p~f~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~~~G~~ 175 (438)
T COG0612 96 FDYTVYYLSVLPDNLDKALDLLADILLNPTFDEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPILGTE 175 (438)
T ss_pred chhhhhhhhhchhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhccCCCCCCCCCCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred hhhcCCCHHHHHHHHHhhcCCCCeEEEEeC-CChHHHHHHHHhhcCCCCCC-CCCCCCC-CCccCC-ceEEc----CCCC
Q 010710 233 SALNRLDGTILEEIVAENFTAPRMVLAASG-VDLDELLPIAEPLLSDLPRL-PPPTEPK-SVYIGG-DYRQQ----ADSP 304 (503)
Q Consensus 233 ~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~l~~~~~~~l~~~-~~~~~~~-~~~~~~-~~~~~----~~~~ 304 (503)
+.|.+++.++|++||++||+|+||+++|+| ++++++.++++++|++|+.. +....+. +...+. ...+. .+..
T Consensus 176 e~I~~it~~dl~~f~~k~Y~p~n~~l~vvGdi~~~~v~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (438)
T COG0612 176 ESIEAITREDLKDFYQKWYQPDNMVLVVVGDVDAEEVVELIEKYFGDLPGAAPPPKIPPEPPLGPERVVRVNDPEQPDLE 255 (438)
T ss_pred HHHHhCCHHHHHHHHHHhcCcCceEEEEecCCCHHHHHHHHHHHHccCCccCCCCCCCCccccCCCceEEecCCCCchhh
Confidence 999999999999999999999999999999 99999999999999999972 2222222 222222 22222 3456
Q ss_pred ceEEEEEeeeCCCCCCC-chhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEeeeccccCcceEEEE
Q 010710 305 ETHIALAFEVPGGWLKD-KEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIY 383 (503)
Q Consensus 305 ~~~v~~~~~~~~~~~~~-~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~~~~Y~~~a~~~~~~~~~~f~i~ 383 (503)
++++.++|+.+. ... .+++++.+++.++|++ ++||||..+|++.|++|+++++...+.+.+.+.++
T Consensus 256 ~~~~~~g~~~~~--~~~~~~~~~~~l~~~llgg~-----------~~SrLf~~~re~~glay~~~~~~~~~~~~~~~~~~ 322 (438)
T COG0612 256 QAWLALGYPGPD--YDSPDDYAALLLLNGLLGGG-----------FSSRLFQELREKRGLAYSVSSFSDFLSDSGLFSIY 322 (438)
T ss_pred hhhhhccccCcC--cCcchhhHHHHHHHHHhCCC-----------cchHHHHHHHHhcCceeeeccccccccccCCceEE
Confidence 788888988886 444 4889999999999976 45999999999999999999988888888999999
Q ss_pred EEeCcchHHHHHHHHHHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHhCCcCCHHHHHHHH
Q 010710 384 ACTGSDFVSKAVDLVVRELILIATP--KQVTQVQLNRAKEATKSAVLMNLESRVIVSEDIGRQILTYGERKSVDQFLSVL 461 (503)
Q Consensus 384 ~~~~p~~~~~~~~~~~~~l~~~~~~--g~i~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i 461 (503)
+.+.+.+..++.+.+.+++..++.. +.+++++++++|..++..+....+++...++.++.+...++...+.+++.+.|
T Consensus 323 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~k~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i 402 (438)
T COG0612 323 AGTAPENPEKTAELVEEILKALKKGLKGPFTEEELDAAKQLLIGLLLLSLDSPSSIAELLGQYLLLGGSLITLEELLERI 402 (438)
T ss_pred EEecCCChhhHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHhcCCccCHHHHHHHH
Confidence 9998555555555555444444442 34999999999999999999999999999999888877557778899999999
Q ss_pred ccCCHHHHHHHHHHhhcCC-ceEEEE
Q 010710 462 EHITLDDITNIAQKIISSP-LTMASY 486 (503)
Q Consensus 462 ~~vT~~di~~~a~~~l~~~-~~~~~~ 486 (503)
++||++||+++|++++..+ .+++++
T Consensus 403 ~~vt~~dv~~~a~~~~~~~~~~~~~~ 428 (438)
T COG0612 403 EAVTLEDVNAVAKKLLAPENLTIVVL 428 (438)
T ss_pred HhcCHHHHHHHHHHhcCCCCcEEEEE
Confidence 9999999999999999876 444444
No 4
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=100.00 E-value=2.5e-43 Score=367.78 Aligned_cols=328 Identities=16% Similarity=0.155 Sum_probs=282.4
Q ss_pred EEEcCCCcEEEEecCC-CCeEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCCHH-HHHHHHHHcCCeeeEeeccc
Q 010710 78 VTTLENGIRIASETSV-SPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHL-RIVREVEAIGGSILASASRE 155 (503)
Q Consensus 78 ~~~L~NG~~v~~~~~~-~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s~~-~l~~~l~~~g~~~~~~~~~~ 155 (503)
.++|+||++|++.+.+ .+.+++.++|++|+.+|+++..|++|++|||+|+||++++.. ++.+.++..|+.+|++++.+
T Consensus 2 ~~tL~NGLrVllv~~p~~p~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~le~lGG~lNA~Ts~d 81 (696)
T TIGR02110 2 RITLPNGLRVHLYHQPDAKRAAALLRVAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWVQRQGGQVNATTLER 81 (696)
T ss_pred eEEcCCCCEEEEEECCCCCEEEEEEEEeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHHHHhCCeEEEEEcCC
Confidence 4789999999965554 689999999999999999999999999999999999999985 79999999999999999999
Q ss_pred eEEEEEecccCCHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHhHhhhCChHHHHHHHHHHHhc-CCCCCCCCCCChhh
Q 010710 156 QMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGY-AGALGNPLLAPESA 234 (503)
Q Consensus 156 ~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 234 (503)
++.|.+++++++++.+|+++.+++.+|.|++++|+++|+.+.+|++...++|...+.+.+...+| +|||+++..|+.++
T Consensus 82 ~T~y~~~v~~~~l~~aL~lLaD~l~~P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iGt~es 161 (696)
T TIGR02110 82 TTAFFFELPAAALAAGLARLCDMLARPLLTAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAGSRDS 161 (696)
T ss_pred eEEEEEEecHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred hcCCC---HHHHHHHHHhhcCCCCeEEEEeC-CChHHHHHHHHhhcCCCCCCCCCCCC--CCCccCCceE-EcCCCCceE
Q 010710 235 LNRLD---GTILEEIVAENFTAPRMVLAASG-VDLDELLPIAEPLLSDLPRLPPPTEP--KSVYIGGDYR-QQADSPETH 307 (503)
Q Consensus 235 l~~l~---~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~l~~~~~~~l~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~ 307 (503)
|+.++ .+++++||+++|.++||+++|+| +++++++++++++|+.|+++..+... .+.+.+.... ...+.++.+
T Consensus 162 L~~it~~t~edL~~F~~~~Y~p~NmvLvIvGdvs~eel~~l~e~~f~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~q~~ 241 (696)
T TIGR02110 162 LALPNTAFQQALRDFHRRHYQAGNMQLWLQGPQSLDELEQLAARFGASLAAGGECAQAPPAPLLRFDRLTLAGGSEPRLW 241 (696)
T ss_pred HhCcccchHHHHHHHHHHhcchhcEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCceeEEEecCcceEE
Confidence 99876 99999999999999999999999 99999999999999999866543221 2222223222 233345666
Q ss_pred EEEEeeeCCCCCCCchhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEeeeccccCcc--eEEEEEE
Q 010710 308 IALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIFNNTG--LFGIYAC 385 (503)
Q Consensus 308 v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~~~~Y~~~a~~~~~~~~~--~f~i~~~ 385 (503)
+.+.++... ..++ ..+.+++++|+++. .++|+.+||+ +|++|++++.. .+.+.+ .|.|++.
T Consensus 242 l~~~~p~~~--~~d~--~al~lL~~iLg~g~-----------sSrL~~~LRe-~GLaysV~s~~-~~~~~g~~lf~I~~~ 304 (696)
T TIGR02110 242 LLFALAGLP--ATAR--DNVTLLCEFLQDEA-----------PGGLLAQLRE-RGLAESVAATW-LYQDAGQALLALEFS 304 (696)
T ss_pred EEEeecCCC--CCCh--HHHHHHHHHhCCCc-----------chHHHHHHHH-CCCEEEEEEec-cccCCCCcEEEEEEE
Confidence 666665443 3333 35899999999864 4999999996 79999999865 444444 8999998
Q ss_pred e---CcchHHHHHHHHHHHHHHhhCCC-CCCHHHHHHHHHH
Q 010710 386 T---GSDFVSKAVDLVVRELILIATPK-QVTQVQLNRAKEA 422 (503)
Q Consensus 386 ~---~p~~~~~~~~~~~~~l~~~~~~g-~i~~~el~~ak~~ 422 (503)
+ .+++.+++++.+.++|.++.+++ +++.+|++++|+.
T Consensus 305 lt~~~~~~~~~v~~~i~~~L~~L~~~~~~~~~eel~rlk~~ 345 (696)
T TIGR02110 305 ARCISAAAAQQIEQLLTQWLGALAEQTWAEQLEHYAQLAQR 345 (696)
T ss_pred EcCCCccCHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Confidence 7 35689999999999999998872 3999999999986
No 5
>PRK15101 protease3; Provisional
Probab=100.00 E-value=7.5e-42 Score=382.74 Aligned_cols=396 Identities=14% Similarity=0.125 Sum_probs=325.8
Q ss_pred CceEEEEcCCCcEEEEe-cCCCCeEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCC-HHHHHHHHHHcCCeeeEe
Q 010710 74 GKVKVTTLENGIRIASE-TSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRS-HLRIVREVEAIGGSILAS 151 (503)
Q Consensus 74 ~~~~~~~L~NG~~v~~~-~~~~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s-~~~l~~~l~~~g~~~~~~ 151 (503)
..++.++|+||++|++. +...+.+.+.+++++|+.+|+++..|++|++|||+|+||++++ ..++.+.++.+||.+|++
T Consensus 42 ~~~~~~~L~NGL~v~l~~~~~~~~~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf~GT~~~p~~~~~~~~l~~~Gg~~NA~ 121 (961)
T PRK15101 42 RQYQAIRLDNGMTVLLVSDPQAVKSLAALALPVGSLEDPDAQQGLAHYLEHMVLMGSKKYPQPDSLAEFLKKHGGSHNAS 121 (961)
T ss_pred cceEEEEeCCCCEEEEEeCCCCcceeEEEEeCcCCCCCCCCCCchHHHHHHHHhcCCccCCCcchHHHHHHHhCCCccce
Confidence 47889999999999954 4456899999999999999999999999999999999999996 578999999999999999
Q ss_pred eccceEEEEEecccCCHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHhHhhhCChHHHHHHHHHHHhc-CCCCCCCCCC
Q 010710 152 ASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGY-AGALGNPLLA 230 (503)
Q Consensus 152 ~~~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~ 230 (503)
|+.+++.|.+++++++++.+|+++.+++.+|.|+++++++++..+.+|++...++|...+.+.+...+| +|||+++..|
T Consensus 122 T~~d~T~y~~~~~~~~l~~aL~~~ad~~~~P~f~~~~~erE~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~hp~~~~~~G 201 (961)
T PRK15101 122 TASYRTAFYLEVENDALPPAVDRLADAIAEPLLDPKNADRERNAVNAELTMARSRDGMRMAQVSAETINPAHPGSRFSGG 201 (961)
T ss_pred ECCCceEEEEEcCHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhCCCCCCcccCCCC
Confidence 999999999999999999999999999999999999999999999999998888999999999999999 9999999999
Q ss_pred ChhhhcCC----CHHHHHHHHHhhcCCCCeEEEEeC-CChHHHHHHHHhhcCCCCCCCCCCC--CCCCcc---CCc-eEE
Q 010710 231 PESALNRL----DGTILEEIVAENFTAPRMVLAASG-VDLDELLPIAEPLLSDLPRLPPPTE--PKSVYI---GGD-YRQ 299 (503)
Q Consensus 231 ~~~~l~~l----~~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~l~~~~~~~l~~~~~~~~--~~~~~~---~~~-~~~ 299 (503)
+.++|..+ +.++|++||++||.|++|+++|+| ++++++.++++++|+.||+...+.. ..+.+. .+. ...
T Consensus 202 ~~etl~~~~~~~~~~~L~~f~~~~Y~p~nm~lvv~G~~~~~~l~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (961)
T PRK15101 202 NLETLSDKPGSKLQDALVDFYQRYYSANLMKAVIYSNQPLPELAKLAADTFGRVPNKNASVPEITVPVVTDAQKGIIIHY 281 (961)
T ss_pred CHHHhhcCCchHHHHHHHHHHHHhCcccceEEEEEcCCCHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCHHHcCeEEEE
Confidence 99999997 699999999999999999999999 9999999999999999987653221 111111 122 222
Q ss_pred cCCCCceEEEEEeeeCCCCCCC-chhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEeeeccc--cC
Q 010710 300 QADSPETHIALAFEVPGGWLKD-KEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIF--NN 376 (503)
Q Consensus 300 ~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~~~~Y~~~a~~~~~--~~ 376 (503)
.+..++..+.+.|+.|+ ... .......+++.+|+++++ +.|+..|+ +.||+|+++++.... .+
T Consensus 282 ~~~~~~~~l~l~~~~p~--~~~~~~~~~~~~l~~ll~~~~~-----------g~l~~~L~-~~gla~~v~s~~~~~~~~~ 347 (961)
T PRK15101 282 VPAQPRKVLRVEFRIDN--NSAKFRSKTDEYISYLIGNRSP-----------GTLSDWLQ-KQGLAEGISAGADPMVDRN 347 (961)
T ss_pred EECCCCcEEEEEEecCC--cHHHHhhCHHHHHHHHhcCCCC-----------CcHHHHHH-HcCccceeeeccccccCCC
Confidence 34467788899999886 322 223357789999997633 56666664 889999999886543 46
Q ss_pred cceEEEEEEeCcc---hHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHc-cCChHHHHHHHHHHHHHhCCcC
Q 010710 377 TGLFGIYACTGSD---FVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMN-LESRVIVSEDIGRQILTYGERK 452 (503)
Q Consensus 377 ~~~f~i~~~~~p~---~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~ 452 (503)
.+.|.+++.+.++ +.+++++.+.+++..+.++| +++++|+++|+.+...+... ...+...+..+...+. ...+.
T Consensus 348 ~g~f~i~~~~~~~~~~~~~~v~~~i~~~i~~l~~~g-~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 425 (961)
T PRK15101 348 SGVFAISVSLTDKGLAQRDQVVAAIFSYLNLLREKG-IDKSYFDELAHVLDLDFRYPSITRDMDYIEWLADTML-RVPVE 425 (961)
T ss_pred ceEEEEEEEcChHHHHhHHHHHHHHHHHHHHHHhcC-CcHHHHHHHHHHHhccccCCCCCChHHHHHHHHHHhh-hCCHH
Confidence 7899999999885 78999999999999999998 99999999999988776443 2333444555555532 22222
Q ss_pred CHHHHHHHHccCCHHHHHHHHHHhhcCCceEEEE
Q 010710 453 SVDQFLSVLEHITLDDITNIAQKIISSPLTMASY 486 (503)
Q Consensus 453 ~~~~~~~~i~~vT~~di~~~a~~~l~~~~~~~~~ 486 (503)
........++.+++++|+++++. |.+....+++
T Consensus 426 ~~l~~~~~~~~~~~~~i~~~~~~-l~~~n~~i~~ 458 (961)
T PRK15101 426 HTLDAPYIADRYDPKAIKARLAE-MTPQNARIWY 458 (961)
T ss_pred HheeCchhhhcCCHHHHHHHHhh-cCHhHEEEEE
Confidence 23344567899999999999988 5655444444
No 6
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=100.00 E-value=1.7e-36 Score=282.73 Aligned_cols=405 Identities=27% Similarity=0.404 Sum_probs=333.7
Q ss_pred ceEEEEcCCCcEEEEecCCCCeEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCCHHHHHHHHHHcCCeeeEeecc
Q 010710 75 KVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASASR 154 (503)
Q Consensus 75 ~~~~~~L~NG~~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~~~ 154 (503)
......|.||++|...+.+.+..++.+.+++||++|+..+.|++||++...++.|.+++...|.+..+..||.++..++|
T Consensus 22 ~~~~~kl~ngL~Vas~e~~~~is~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~sal~ivr~se~~GG~Lss~~tR 101 (429)
T KOG2583|consen 22 ISKTTKLVNGLTVASREAPTAISSLSLAFRAGSRYEPADQQGLSHLLRNFVGRDTQERSALKIVRESEQLGGTLSSTATR 101 (429)
T ss_pred hhhhhccccceEEEeccCCCcceEEEEEEecCccCCccccccHHHHHHHhcccCccccchhhhhhhhHhhCceeeeeeec
Confidence 44667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEecccCCHHHHHHHHHHhhcCCCCChHHHHHHH-HHHHHHhHhhhCChHHHHHHHHHHHhcCCCCCCCCCCChh
Q 010710 155 EQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEEL-RKLKSELGELHNNPQGLLLEAIHSTGYAGALGNPLLAPES 233 (503)
Q Consensus 155 ~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k-~~~~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (503)
|.+.|++++++++++..|.+|.+.+.+|.|.+|++++.. ..+..++. ..+|+..+++.+|...|.+.+|++.+.+.-
T Consensus 102 e~~~~tvt~lrd~~~~~l~~L~~V~~~paFkPwEl~D~~~~ti~~~l~--~~t~~~~a~e~lH~aAfRngLgnslY~p~~ 179 (429)
T KOG2583|consen 102 ELIGLTVTFLRDDLEYYLSLLGDVLDAPAFKPWELEDVVLATIDADLA--YQTPYTIAIEQLHAAAFRNGLGNSLYSPGY 179 (429)
T ss_pred ceEEEEEEEecccHHHHHHHHHHhhcccCcCchhhhhhhhhhhHHHhh--hcChHHHHHHHHHHHHHhcccCCcccCCcc
Confidence 999999999999999999999999999999999999988 56555444 479999999999999994489999988777
Q ss_pred hhcCCCHHHHHHHHHhhcCCCCeEEEEeCCChHHHHHHHHhhcCCCCCCCCCCCCCCCccCCceEEcCCCCceEEEEEee
Q 010710 234 ALNRLDGTILEEIVAENFTAPRMVLAASGVDLDELLPIAEPLLSDLPRLPPPTEPKSVYIGGDYRQQADSPETHIALAFE 313 (503)
Q Consensus 234 ~l~~l~~~~l~~f~~~~~~~~~~~l~i~G~~~~~l~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 313 (503)
.+.+++.++|.+|.+++|...|++++.+|+|++.++...++++ .++........+..|.+++.+........+++++-.
T Consensus 180 ~vg~vss~eL~~Fa~k~fv~gn~~lvg~nvd~~~L~~~~~~~~-~~~~~~~~k~a~a~~~gGe~Rk~~~g~~~~v~vage 258 (429)
T KOG2583|consen 180 QVGSVSSSELKDFAAKHFVKGNAVLVGVNVDHDDLKQFADEYA-PIRDGLPLKPAPAKYSGGEARKDARGNRVHVAVAGE 258 (429)
T ss_pred cccCccHHHHHHHHHHHhhccceEEEecCCChHHHHHHHHHhc-cccCCCCCCCCCccccCCccccccCCceeEEEEecC
Confidence 8999999999999999999999999999999999999999983 233322222234467888888776677777776655
Q ss_pred eCCCCCCCchhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEeeeccccCcceEEEEEEeCcchHHH
Q 010710 314 VPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYACTGSDFVSK 393 (503)
Q Consensus 314 ~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~~~~Y~~~a~~~~~~~~~~f~i~~~~~p~~~~~ 393 (503)
.-. ..+.++..+..++.+.|+......-| .+.+.+..-...+..-+++++...|.+.|+|++|+...-.++.+
T Consensus 259 gAA-a~~~k~~~a~av~~~~Lg~~~~~k~~------t~~~~~aa~~a~~~~~s~sA~~a~ysDsGL~gv~~~~~~~~a~~ 331 (429)
T KOG2583|consen 259 GAA-AGNLKVLAAQAVLLAALGNSAPVKRG------TGLLSEAAGAAGEQGASASAFNAPYSDSGLFGVYVSAQGSQAGK 331 (429)
T ss_pred ccc-ccchHHHHHHHHHHHHHhcccccccc------cchHHHHHhhccccCceeeeecccccCCceEEEEEEecCccHHH
Confidence 443 23578999999999999975311111 13343333333334557788899999999999999999888999
Q ss_pred HHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHhCCcCCHHHHHHHHccCCHHHHHHHH
Q 010710 394 AVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLESRVIVSEDIGRQILTYGERKSVDQFLSVLEHITLDDITNIA 473 (503)
Q Consensus 394 ~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~vT~~di~~~a 473 (503)
++......+...+..+ ++......+++.++....+..+... ... ... .+..-+.+.++..|++||..||++++
T Consensus 332 ~v~s~v~~lks~~~~~-id~~~~~a~~~~l~~~~~ss~~a~~---~~~--~~~-a~~~~~~d~~i~~id~Vt~sdV~~a~ 404 (429)
T KOG2583|consen 332 VVSSEVKKLKSALVSD-IDNAKVKAAIKALKASYLSSVEALE---LAT--GSQ-ANLVSEPDAFIQQIDKVTASDVQKAA 404 (429)
T ss_pred HHHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHhhcchHHHH---Hhh--HHH-hcCCCChHHHHHHhccccHHHHHHHH
Confidence 9999999998888876 8888888887777766655543321 111 112 22222568899999999999999999
Q ss_pred HHhhcCCceEEEE--ccCCCCHHHH
Q 010710 474 QKIISSPLTMASY--VINVPGYESV 496 (503)
Q Consensus 474 ~~~l~~~~~~~~~--~~~~p~~~~~ 496 (503)
++++..+.+++++ +..+|.+|++
T Consensus 405 kk~~s~kls~aA~Gnl~~vPY~DEL 429 (429)
T KOG2583|consen 405 KKFLSGKLSLAAYGNLSNVPYLDEL 429 (429)
T ss_pred HHhccCcceeeeeccccCCcccccC
Confidence 9999999999999 9999999874
No 7
>PTZ00432 falcilysin; Provisional
Probab=100.00 E-value=1.8e-34 Score=320.11 Aligned_cols=400 Identities=12% Similarity=0.093 Sum_probs=309.2
Q ss_pred ceEEEEcCCCcEEEEecCCC---CeEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCCHHHHHHHHHHcC--Ceee
Q 010710 75 KVKVTTLENGIRIASETSVS---PAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIG--GSIL 149 (503)
Q Consensus 75 ~~~~~~L~NG~~v~~~~~~~---~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s~~~l~~~l~~~g--~~~~ 149 (503)
.+......||++|++...+. +...+.++++.|+. +..|++|++|||+|.||++++..++...++..| +.+|
T Consensus 91 ~~~~~H~~nGl~vl~~~~~d~~~~~~~f~i~f~T~~~----d~~G~aH~LEH~~f~GS~k~p~~~~~~~l~~~gl~~~lN 166 (1119)
T PTZ00432 91 ATVYSHKKTGLQVISLKTNDSSGKEMCFDFYVPTPPH----NDKGIPHILEHSVLSGSKKYNYKDSFSLLVQGGFNSFLN 166 (1119)
T ss_pred EEEEEEcCCCCEEEEEecCCCccceeEEEEEecCCCC----CCcchhHHHHHHHhCCCCCCCcccHHHHHHhcCcCCCcc
Confidence 45666788999999655443 47889999999973 457999999999999999999999999998866 7799
Q ss_pred EeeccceEEEEEecccC-CHHHHHHHHHHhhcCCCCChHHH--HH---------H--------------------HHHHH
Q 010710 150 ASASREQMGYSFDALKT-YVPEMVELLVDCVRNPVFLDWEV--NE---------E--------------------LRKLK 197 (503)
Q Consensus 150 ~~~~~~~~~~~~~~~~~-~l~~~l~ll~~~~~~p~f~~~~~--~~---------~--------------------k~~~~ 197 (503)
++|+.|+++|.+++.++ ++..+++++.+.+.+|.|+++++ .+ . +..+.
T Consensus 167 A~T~~D~T~Y~~~~~~e~d~~~~ldv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kgVV~ 246 (1119)
T PTZ00432 167 AYTFKDRTSYLFASTNEKDFYNTADVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSGIVY 246 (1119)
T ss_pred ccCCCCceEEEeccCCHHHHHHHHHHHHHHHhCcCcccccchhhhhhhhccccccccccccccccccccccccchhhHHH
Confidence 99999999999999885 79999999999999999988763 22 1 66788
Q ss_pred HHhHhhhCChHHHHHHHHHHHhcCCCCCCCCCCChhhhcCCCHHHHHHHHHhhcCCCCeEEEEeC-CChHHHHHHHHhhc
Q 010710 198 SELGELHNNPQGLLLEAIHSTGYAGALGNPLLAPESALNRLDGTILEEIVAENFTAPRMVLAASG-VDLDELLPIAEPLL 276 (503)
Q Consensus 198 ~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~l~~~~~ 276 (503)
+|++...++|...+.+.+...+|+|||+++..|+++.|..++.+++++||+++|+|+|++++++| ++++++.++++++|
T Consensus 247 ~Emk~~~~~p~~~~~~~~~~~lf~~pY~~~~~G~~~~I~~lt~e~l~~Fh~~~Y~P~N~~l~v~Gdid~~~~l~~l~~~f 326 (1119)
T PTZ00432 247 SEMKKRFSDPLSFGYSVIYQNLFSNVYKYDSGGDPKDIVELTYEELVEFYKTYYGPKTATVYFYGPNDVTERLEFVDNYL 326 (1119)
T ss_pred HHHHHhhCCHHHHHHHHHHHHHhCCCCCCCCCCChHhhccCCHHHHHHHHHHhcCccceEEEEEcCCCHHHHHHHHHHHH
Confidence 99999999999999999988888899999999999999999999999999999999999999999 99999999999999
Q ss_pred CCCCCCCCC------C-C--CCC--CccCCceEE-----cCCCCceEEEEE-eeeCCCC----------CCCchhHHHHH
Q 010710 277 SDLPRLPPP------T-E--PKS--VYIGGDYRQ-----QADSPETHIALA-FEVPGGW----------LKDKEAIILTV 329 (503)
Q Consensus 277 ~~l~~~~~~------~-~--~~~--~~~~~~~~~-----~~~~~~~~v~~~-~~~~~~~----------~~~~~~~~~~v 329 (503)
+.+|..... . . +.+ .+..+...+ ..+..+..+.++ |.+++.. .+.+++.++.|
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~e~~~l~~~~w~~~p~~~~~~~~~~~~~d~~~~~AL~V 406 (1119)
T PTZ00432 327 TKHPKTGQLSHTAYREDADENLLYEEYKDKPKHVKKKFSSHSEEEENLMSVSWLLNPKHNGSKDYDKSLIDPVDYLALLV 406 (1119)
T ss_pred hhcccccccccccccccccccccccccccCCeEEEeccCCCccccccEEEEEEEcCCccccccccccccCCHHHHHHHHH
Confidence 888754211 0 0 011 111111111 122345666665 9774210 12368899999
Q ss_pred HHHhcCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEE-EeeeccccCcceEEEEEE-eCc-------chHHHHHHHHHH
Q 010710 330 LQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSF-SAFNSIFNNTGLFGIYAC-TGS-------DFVSKAVDLVVR 400 (503)
Q Consensus 330 l~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~~~~Y~~-~a~~~~~~~~~~f~i~~~-~~p-------~~~~~~~~~~~~ 400 (503)
|+++|+++++ ++|++.||+ .|++|++ +++.......+.|.|++. +++ +++.++.+.+.+
T Consensus 407 Ls~lLggg~s-----------S~L~q~LrE-~GLa~svv~~~~~~~~~~~~f~I~l~g~~~~~~~~~~~~~~ev~~~I~~ 474 (1119)
T PTZ00432 407 LNYLLLGTPE-----------SVLYKALID-SGLGKKVVGSGLDDYFKQSIFSIGLKGIKETNEKRKDKVHYTFEKVVLN 474 (1119)
T ss_pred HHHHHcCCCc-----------cHHHHHHHh-cCCCcCCCcCcccCCCCceEEEEEEEcCChHhccchhhhHHHHHHHHHH
Confidence 9999998755 999999996 7999986 344444556788888876 332 347789999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHccCC----hHHHHHHHHHHHHHhCCcCC---HHHHHHHHcc---CCHHHHH
Q 010710 401 ELILIATPKQVTQVQLNRAKEATKSAVLMNLES----RVIVSEDIGRQILTYGERKS---VDQFLSVLEH---ITLDDIT 470 (503)
Q Consensus 401 ~l~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~---~~~~~~~i~~---vT~~di~ 470 (503)
+|.++.++| +++++++++++++...+...... ....+..+...+++++.+.. .+...+.++. -+...+.
T Consensus 475 ~L~~l~~eG-i~~eele~a~~qlef~~rE~~~~~~p~gl~~~~~~~~~~~~g~dp~~~l~~~~~l~~lr~~~~~~~~y~e 553 (1119)
T PTZ00432 475 ALTKVVTEG-FNKSAVEASLNNIEFVMKELNLGTYPKGLMLIFLMQSRLQYGKDPFEILRFEKLLNELKLRIDNESKYLE 553 (1119)
T ss_pred HHHHHHHhC-CCHHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHHHhcCCCHHHHHhhHHHHHHHHHHHhcccHHHH
Confidence 999999998 99999999999998887665321 23445566666665554433 2222333221 1335799
Q ss_pred HHHHHhhcCCceEEEE-ccCCC
Q 010710 471 NIAQKIISSPLTMASY-VINVP 491 (503)
Q Consensus 471 ~~a~~~l~~~~~~~~~-~~~~p 491 (503)
++.++||..++..+++ +...|
T Consensus 554 ~Li~k~ll~N~h~~~v~~~p~~ 575 (1119)
T PTZ00432 554 KLIEKHLLNNNHRVTVHLEAVE 575 (1119)
T ss_pred HHHHHHccCCCeeeEEEEecCC
Confidence 9999999888777766 66666
No 8
>PRK15101 protease3; Provisional
Probab=100.00 E-value=2.8e-34 Score=321.76 Aligned_cols=408 Identities=11% Similarity=0.066 Sum_probs=318.6
Q ss_pred CCCCccCCCCCCCCCC---CCCCCCCceEEEEcCCCcEEEEecCC----CCeEEEEEEEeccccCCCCCCCcHHHHHHHH
Q 010710 52 PSLDTPLEGVSFPPSL---PDFVEPGKVKVTTLENGIRIASETSV----SPAASIGLYLDFGSVYETPSSCGASNLLEKM 124 (503)
Q Consensus 52 ~~l~~plp~~~~p~~~---~~~~~~~~~~~~~L~NG~~v~~~~~~----~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l 124 (503)
+.++.|-++.++|+.. +.......++.++++||++||+.+.+ .|++.+.+.+.+|...+++...+++.|+..|
T Consensus 496 ~~l~lP~~n~fip~~~~~~~~~~~~~~p~~i~~~~g~~vw~~~d~~f~~~Pk~~i~~~~~~~~~~~~~~~~~l~~L~~~l 575 (961)
T PRK15101 496 IALSLPELNPYIPDDFSLIKADKAYKHPELIVDEPGLRVVYMPSQYFADEPKADISLVLRNPKAMDSARNQVLFALNDYL 575 (961)
T ss_pred ccCCCCCCCCccCCCCeeccCCCCCCCCeEEEcCCCeEEEEeCCCccccCCCEEEEEEEeCCCccCCHHHHHHHHHHHHH
Confidence 4567777777777732 11112235788999999999954443 5899999999999999999999999999999
Q ss_pred HcccCCCCCHHHHHHHHHHcCCeeeEeeccceEEEEEecccCCHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHhHhhh
Q 010710 125 AFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELH 204 (503)
Q Consensus 125 ~~~gt~~~s~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~ 204 (503)
+ +.+..++.+..+..|.+++.+ +.+++.+++++++++++.+|+++.+.+.+|.|++++|+++|+.+.+++++..
T Consensus 576 l-----~~~l~e~~y~a~~aG~~~~~~-~~~g~~i~v~g~s~~l~~ll~~l~d~l~~~~~~~~~fe~~k~~~~~~l~~~~ 649 (961)
T PRK15101 576 A-----GLALDQLSNQASVGGISFSTN-ANNGLMVNANGYTQRLPQLLQALLEGYFSFTPTEEQLAQAKSWYREQLDSAE 649 (961)
T ss_pred H-----HHHHHHHhchHHhcCcEEEEc-cCCCEEEEEEecChhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhhc
Confidence 8 556677778888899999999 7999999999999999999999999999999999999999999999998654
Q ss_pred -CChHHHHHHHHHHHhc-CCCCCCCCCCChhhhcCCCHHHHHHHHHhhcCCCCeEEEEeC-CChHHHHHHHHhhcCCCCC
Q 010710 205 -NNPQGLLLEAIHSTGY-AGALGNPLLAPESALNRLDGTILEEIVAENFTAPRMVLAASG-VDLDELLPIAEPLLSDLPR 281 (503)
Q Consensus 205 -~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~l~~~~~~~l~~ 281 (503)
..|...+...+ ..+ .|||+.+ .++.+.|+++|.+++++|++++|.+.+++++|+| ++.+++.++++++++.++.
T Consensus 650 ~~~~~~~~~~~~--~~~~~~py~~~-~~~~~~l~~it~edl~~f~~~~~~~~~~~~~v~GNi~~~ea~~l~~~~~~~l~~ 726 (961)
T PRK15101 650 KGKAYEQAIMPA--QMLSQVPYFER-DERRKLLPSITLKDVLAYRDALLSGATPEFLVVGNLTEEQVTTLARDVQKQLGA 726 (961)
T ss_pred ccCcHHHHHHHH--HHHhcCCCCCH-HHHHHHHhcCCHHHHHHHHHHHHHhceEEEEEEcCCCHHHHHHHHHHHHHHhcc
Confidence 34554444433 234 8898864 5688999999999999999999999999999999 9999999999998888865
Q ss_pred CCCCC-CCC--CCccCCceEE--cCCCCceEEEEEeeeCCCCCCCchhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHH
Q 010710 282 LPPPT-EPK--SVYIGGDYRQ--QADSPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLR 356 (503)
Q Consensus 282 ~~~~~-~~~--~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~ 356 (503)
.+... ... ....+....+ .....+..+.+.|...+ .+ .....+++.||+++ |+++||++
T Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~---~~~~~v~~~lLg~~-----------~ssrlf~~ 790 (961)
T PRK15101 727 DGTEWWRGKDVVVDKKQSVNFEKAGSSTDSALAAVYVPTG--YD---EYQSSAYSSLLGQI-----------IQPWFYNQ 790 (961)
T ss_pred CCcccccccceEeCCCCeEEEecCCCCCCCeEEEEEEeCC--CC---CHHHHHHHHHHHHH-----------HhHHHHHH
Confidence 32211 100 0111112222 22334455555554343 22 25667777777764 45999999
Q ss_pred HHhhcCCeEEEEeeeccccCcceEEEEEEeC---cchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHccCC
Q 010710 357 VLNEYQQIQSFSAFNSIFNNTGLFGIYACTG---SDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLES 433 (503)
Q Consensus 357 lR~~~~~~Y~~~a~~~~~~~~~~f~i~~~~~---p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~ 433 (503)
||+++|++|+|+++.....+.+.+.++++++ |+.+.+.++.+++++.+... | +|++||+++|+.++.++....++
T Consensus 791 LRtk~qLgY~V~s~~~~~~~~~~~~~~vqs~~~~~~~l~~~i~~f~~~~~~~l~-~-lt~eE~~~~k~~l~~~~~~~~~s 868 (961)
T PRK15101 791 LRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPAYLWQRYQAFFPQAEAKLR-A-MKPEEFAQYQQALINQLLQAPQT 868 (961)
T ss_pred HHHHhhhceEEEEEeeccCCeeeEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH-h-CCHHHHHHHHHHHHHHhcCCCCC
Confidence 9999999999999987776666777777655 67788888888888655454 5 99999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhCCc-CCHHHHHHHHccCCHHHHHHHHHHh-hcCCc-eEEEE
Q 010710 434 RVIVSEDIGRQILTYGER-KSVDQFLSVLEHITLDDITNIAQKI-ISSPL-TMASY 486 (503)
Q Consensus 434 ~~~~~~~~~~~~~~~g~~-~~~~~~~~~i~~vT~~di~~~a~~~-l~~~~-~~~~~ 486 (503)
....+.++|..+..++.+ +..+++.+.|++||++||.+++++| +.... .+++.
T Consensus 869 l~~~a~~~~~~i~~~~~~fd~~~~~~~~i~~vT~edv~~~~~~~~~~~~~~~~~~~ 924 (961)
T PRK15101 869 LGEEASRLSKDFDRGNMRFDSRDKIIAQIKLLTPQKLADFFHQAVIEPQGLAILSQ 924 (961)
T ss_pred HHHHHHHHHHHHhcCCCCcChHHHHHHHHHcCCHHHHHHHHHHHhcCCCCCEEEEE
Confidence 999999999998755544 4578999999999999999999998 55443 44333
No 9
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.7e-30 Score=267.58 Aligned_cols=403 Identities=17% Similarity=0.188 Sum_probs=321.8
Q ss_pred CCCceEEEEcCCCcEEE-EecCCCCeEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCC-HHHHHHHHHHcCCeee
Q 010710 72 EPGKVKVTTLENGIRIA-SETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRS-HLRIVREVEAIGGSIL 149 (503)
Q Consensus 72 ~~~~~~~~~L~NG~~v~-~~~~~~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s-~~~l~~~l~~~g~~~~ 149 (503)
+...++..+|+||+++. ..|...+++...|.|+.|+.++|.+..|+||++|||+|.|+++++ ...+..+|+.+||+.|
T Consensus 20 d~r~y~~I~LpNGl~~LlisDP~a~ks~aAL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskhgGs~N 99 (937)
T COG1025 20 DDRKYRAIKLPNGLRALLVSDPQADKSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHGGSHN 99 (937)
T ss_pred cCcceeEEECCCCceEEEecCCCCCccceeEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHcCCccc
Confidence 33588999999999999 566667899999999999999999999999999999999999965 5668999999999999
Q ss_pred EeeccceEEEEEecccCCHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHhHhhhCChHHHHHHHHHHHhc-CCCCCCCC
Q 010710 150 ASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGY-AGALGNPL 228 (503)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~ 228 (503)
++|..+.|+|.+++.++.++.+|+.++++|.+|.|+++..++++..+.+|+.....+-.+++.......+- +||+.+..
T Consensus 100 A~T~~~~T~fyFeV~~~al~~ALDrFa~ff~~PLf~~e~~dRE~~AV~sE~~~~~~~D~~R~~~~~~~~~np~HP~srFs 179 (937)
T COG1025 100 ASTAGERTAFYFEVENDALEGALDRFADFFIEPLFNKEALDRERNAVNSEFTMNLTSDGWRMYQVQALTANPGHPLSKFS 179 (937)
T ss_pred cccCCCceeEEEEecHHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHhcCcCchHHHHHHHHHhhcCCCCCccccC
Confidence 99999999999999999999999999999999999999999999999999999888888888888888888 99999999
Q ss_pred CCChhhhcC----CCHHHHHHHHHhhcCCCCeEEEEeC-CChHHHHHHHHhhcCCCCCCCCCCCCC--CC----ccCCce
Q 010710 229 LAPESALNR----LDGTILEEIVAENFTAPRMVLAASG-VDLDELLPIAEPLLSDLPRLPPPTEPK--SV----YIGGDY 297 (503)
Q Consensus 229 ~~~~~~l~~----l~~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~l~~~~~~~l~~~~~~~~~~--~~----~~~~~~ 297 (503)
.|+.++|.. ...+++.+||+++|.+++|+++|.| -+.+++.+++.++|+.+|+......+. |+ ..+...
T Consensus 180 ~GN~~TL~~~p~~~v~~el~ef~~~~YSa~~M~lviyg~q~ldeL~~~a~~~F~~Ipn~~~~~p~~p~p~~~d~~t~~ii 259 (937)
T COG1025 180 TGNLETLSDKPGLVVQQELKEFHEKHYSANNMKLVIYGNQPLDELAKLAADLFGDIPNRARKIPPIPVPVVTDEQTGKII 259 (937)
T ss_pred CCChhhhccCCCchHHHHHHHHHHHhcChhheEEEEecCCCHHHHHHHHHHHhCcCCCCCCCCCCCCCCCCChHHhCceE
Confidence 999999987 5589999999999999999999999 999999999999999999765443322 22 233445
Q ss_pred EEcCCCCceEEEEEeeeCCCCCCCchhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEeeecccc-C
Q 010710 298 RQQADSPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIFN-N 376 (503)
Q Consensus 298 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~~~~Y~~~a~~~~~~-~ 376 (503)
++.+..+...+.++|++++. ...-..-....+.+++|.. ||| +-+ ....++||+-++.++..... +
T Consensus 260 ~i~p~~~~~~L~i~f~i~~~-~~~~~~~~~~~~s~Lig~e------s~g----sL~--~~Lk~~Glit~l~a~~~~~~~n 326 (937)
T COG1025 260 HIVPAKPRPRLRIYFPIDDN-SAKFRSKPDEYLSHLIGNE------SPG----SLL--AWLKKQGLITELSAGLDPISGN 326 (937)
T ss_pred EeccCCCCceEEEEEEcCCc-ccccccCCHHHHHHHhccC------CCc----hHH--HHHHhccchhhhccccccccCC
Confidence 55566677888999999972 2222345678889999976 344 333 45568899999999876655 7
Q ss_pred cceEEEEEEeC---cchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHccCC-hHHHHHHHHHHHHHhCCcC
Q 010710 377 TGLFGIYACTG---SDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLES-RVIVSEDIGRQILTYGERK 452 (503)
Q Consensus 377 ~~~f~i~~~~~---p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~ 452 (503)
.+.|.|..... -.+.++++..+.+.+.-+...| +....|++..+-.-..+.....+ +.+.+..+... ....
T Consensus 327 ~~~f~is~~LT~~Gl~~~~~VI~~~F~yl~~l~~~~-~~~~~f~Elq~v~~l~f~y~~~t~~~~~~~~l~~~---m~~~- 401 (937)
T COG1025 327 YGVFAISYELTDKGLAHYDRVIALTFQYLNLLREKG-IPKYTFDELQNVLDLDFRYPSKTRPMDYVSWLADN---MERE- 401 (937)
T ss_pred cceEEEEeehhhcchhhHHHHHHHHHHHHHHHHhcc-chhhHHHHHHHHHHhhhcccccCChHHHHHHHHHh---cccC-
Confidence 77787765443 4688999999999999999888 88888887766544444433333 23333333322 2222
Q ss_pred CHHHH---HHHHccCCHHHHHHHHHHhhcCCceEEEEccCCCCH
Q 010710 453 SVDQF---LSVLEHITLDDITNIAQKIISSPLTMASYVINVPGY 493 (503)
Q Consensus 453 ~~~~~---~~~i~~vT~~di~~~a~~~l~~~~~~~~~~~~~p~~ 493 (503)
+++.+ .-.+..-++++++.++.-+. +....+.++...+..
T Consensus 402 p~~~~~~~~~~~~~yd~~~~~~~l~~~~-pen~R~~lis~~~~~ 444 (937)
T COG1025 402 PVEHTLYASLVLPRYDPKAIQERLALMT-PENARLWLISKLEEH 444 (937)
T ss_pred ChhhhhchhhcccccCHHHHHHHHHhhC-ccceEEEEecCCCCc
Confidence 33333 33577778899999998877 666766665444443
No 10
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=6.6e-29 Score=261.89 Aligned_cols=398 Identities=16% Similarity=0.167 Sum_probs=311.7
Q ss_pred CceEEEEcCCCcEEE-EecCCCCeEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCC-HHHHHHHHHHcCCeeeEe
Q 010710 74 GKVKVTTLENGIRIA-SETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRS-HLRIVREVEAIGGSILAS 151 (503)
Q Consensus 74 ~~~~~~~L~NG~~v~-~~~~~~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s-~~~l~~~l~~~g~~~~~~ 151 (503)
-.++...|+||+++. ..|...++++..+.|..||..+|.+..|+||++|||+|.||.+++ .+++..++..+||..||+
T Consensus 26 r~yr~~~L~Ngl~alLisDp~tD~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~gGssNA~ 105 (974)
T KOG0959|consen 26 REYRGIELTNGLRALLISDPKTDKSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKNGGSSNAY 105 (974)
T ss_pred cceeEEEecCCceEEEecCCCCCccceeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhcCCccccc
Confidence 378999999999999 455446689999999999999999999999999999999999965 666888999999999999
Q ss_pred eccceEEEEEecccCCHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHhHhhhCChHHHHHHHHHHHhc-CCCCCCCCCC
Q 010710 152 ASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGY-AGALGNPLLA 230 (503)
Q Consensus 152 ~~~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~ 230 (503)
|+.++|.|.+.+..++++.+|+.+++++..|.|++++.++++..+.+|..+..++..++..+......- +||++....|
T Consensus 106 T~~e~T~y~F~V~~~~l~~ALDrFaqFf~~Plf~~~a~eREv~AVdSE~~~nl~~D~wr~~ql~~~l~~~~hp~~kF~tG 185 (974)
T KOG0959|consen 106 TDSEHTNYYFDVQHDHLEGALDRFAQFFSDPLFNKSATEREVGAVDSEHEKNLNSDGWRFDQLLRSLSNPGHPYSKFSTG 185 (974)
T ss_pred cccccceEEEecchHHHHHHHHHHHHHhhCcccChHHHHHHHHHHHHHHHhccCcchhHHHHHHHHhcCCCCcchhcccc
Confidence 999999999999999999999999999999999999999999999999999999999998888888888 9999999999
Q ss_pred ChhhhcCCC-----HHHHHHHHHhhcCCCCeEEEEeC-CChHHHHHHHHhhcCCCCCCCCCCCC--CCC----ccCCceE
Q 010710 231 PESALNRLD-----GTILEEIVAENFTAPRMVLAASG-VDLDELLPIAEPLLSDLPRLPPPTEP--KSV----YIGGDYR 298 (503)
Q Consensus 231 ~~~~l~~l~-----~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~l~~~~~~~l~~~~~~~~~--~~~----~~~~~~~ 298 (503)
+.++|.... .+.|.+||++||.+++|+++|+| .+.|++..++...|+.+++...+.+. .++ ..++.+.
T Consensus 186 N~~tL~~~p~~~~~r~~L~kF~k~~Yssn~M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~p~f~~~p~~~e~~~~~~~ 265 (974)
T KOG0959|consen 186 NKKTLLEGPREIDLRDELLKFYKNWYSSNIMTLVIVGKESLDVLESLVTRLFDEISNKKKPRPVFPEPPFLPEELKKLVR 265 (974)
T ss_pred chhhhhhccccchHHHHHHHHHHhhcccccceEEEEcCCChhHHHHHHHHHcccccccCCCCCcccCCCCChHHhCcEEE
Confidence 999999998 99999999999999999999999 99999999999999999877654432 122 2334555
Q ss_pred EcCCCCceEEEEEeeeCCCCCCCchhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEeeec-cccCc
Q 010710 299 QQADSPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNS-IFNNT 377 (503)
Q Consensus 299 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~~~~Y~~~a~~~-~~~~~ 377 (503)
+.+-.+-..+.+.|+.|+. ...-+.-....+.+++|.. ||| -|...|+ +.||+-+..++.. ...+.
T Consensus 266 v~pik~~~~l~is~~~p~~-~~~y~~kP~~y~~hLighe------g~G-----SL~~~Lk-~~gw~~sl~a~~~~~as~~ 332 (974)
T KOG0959|consen 266 VVPIKDGRSLMISWPVPPL-NHHYKSKPLRYLSHLIGHE------GPG-----SLLSYLK-RLGWATSLEAGIPEFASGY 332 (974)
T ss_pred EEeccccceEEEEEecCCc-ccccccCcHHHHHHHhccC------Ccc-----hHHHHHH-HhhchheeecCCCcccccc
Confidence 6566677888899999973 3455666788999999987 443 4444666 5699999988876 34466
Q ss_pred ceEEEEEEeC---cchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHc-cCChHHHHHHHHHHHHHhCCcCC
Q 010710 378 GLFGIYACTG---SDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMN-LESRVIVSEDIGRQILTYGERKS 453 (503)
Q Consensus 378 ~~f~i~~~~~---p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~ 453 (503)
+.|.+.+... -+++++++..+.+.+..+...| ....-+++....-...+... .+.+...+..+...+. +-....
T Consensus 333 ~~f~v~idLtd~G~e~~~~ii~~~f~yi~~l~~~~-~~~~i~~E~~~~~~~~Frf~~k~~p~~~~~~~~~nlq-~~P~~~ 410 (974)
T KOG0959|consen 333 SFFNVSIDLTDEGLEHVDEIIGLVFNYIKLLQSAG-PEKWIFKELQLISEVKFRFQDKEPPMEYASEIASNLQ-YYPVED 410 (974)
T ss_pred ceEEEEEEeccccchhHHHHHHHHHHHHHHHHhcC-chhHHHHHHHHhhhhheeecccCCcHHHHHHHHhhcc-cCChHH
Confidence 7777766544 4688999999999999888766 55555554433222222222 2245555556655433 111122
Q ss_pred HHHHHHHHccCCHHHHHHHHHHhhcCCceEEEE
Q 010710 454 VDQFLSVLEHITLDDITNIAQKIISSPLTMASY 486 (503)
Q Consensus 454 ~~~~~~~i~~vT~~di~~~a~~~l~~~~~~~~~ 486 (503)
+-.....+....++.|+.+...+--.+..++.+
T Consensus 411 il~~~~ll~~~~p~~i~~~~~~L~p~n~~v~~~ 443 (974)
T KOG0959|consen 411 VLTGSYLLTEFDPDLIQEVLSSLVPSNMRVILV 443 (974)
T ss_pred hhcchhhhhhcChHHHHHHHHhcCcccceeeee
Confidence 223344677788888888876654444444433
No 11
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.1e-24 Score=226.10 Aligned_cols=409 Identities=11% Similarity=0.095 Sum_probs=320.7
Q ss_pred CCCCccCCCCCCCCCCCC-CCC--CCceEEEEcCCCcEEE-EecCC--C-CeEEEEEEEeccccCCCCCCCcHHHHHHHH
Q 010710 52 PSLDTPLEGVSFPPSLPD-FVE--PGKVKVTTLENGIRIA-SETSV--S-PAASIGLYLDFGSVYETPSSCGASNLLEKM 124 (503)
Q Consensus 52 ~~l~~plp~~~~p~~~~~-~~~--~~~~~~~~L~NG~~v~-~~~~~--~-~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l 124 (503)
+.+..|.||.+||..+.. +.+ ...++...-..|.++| .+++. . |++.+.+.++.+.+..++....+..|+..+
T Consensus 475 ~~l~lP~~N~fIp~~~~~~~~~~~~~~p~ll~~~~~~~~wy~~~d~F~~~PK~~v~~~irsp~~~~s~r~~Vl~~l~~~l 554 (937)
T COG1025 475 IELSLPEPNPFIPDDVSLIKSEKKFTFPQLLSEDPNLRLWYLKEDYFAVEPKASVSLAIRSPHASRSPRNQVLTELYAYL 554 (937)
T ss_pred ccccCCCCCCCCCccccccccccCCCCchhhhcCCCceEEEecCCccccCCcceeEEEEeCcccccCHHHHHHHHHHHHH
Confidence 446688889888885433 111 1123444445677777 44444 4 899999999999999998888889999999
Q ss_pred HcccCCCCCHHHHHHHHHHcCCeeeEeeccceEEEEEecccCCHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHhHh-h
Q 010710 125 AFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGE-L 203 (503)
Q Consensus 125 ~~~gt~~~s~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~-~ 203 (503)
+ +....++.+.+...|.+++...+..++.++++|+++.++.+++.+.+.+..-.++++.|...|+++.+++++ .
T Consensus 555 a-----~dal~~~~y~A~~aG~sfs~~~~~~Gl~ltisGft~~lp~L~~~~l~~l~~~~~~~~~f~~~K~~~~~~~~~a~ 629 (937)
T COG1025 555 A-----NDALDKLSYQASLAGLSFSLAANSNGLDLTISGFTQRLPQLLRAFLDGLFSLPVDEDRFEQAKSQLSEELKNAL 629 (937)
T ss_pred H-----HHHHHhhhhHHHhcceEEEeecCCCceEEEeeccccchHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhh
Confidence 9 444455556688899999999999999999999999999999999999999999999999999999999995 5
Q ss_pred hCChHHHHHHHHHHHhcCCCCCCCCCCChhhhcCCCHHHHHHHHHhhcCCCCeEEEEeC-CChHHHHHHHHhhcCCCCCC
Q 010710 204 HNNPQGLLLEAIHSTGYAGALGNPLLAPESALNRLDGTILEEIVAENFTAPRMVLAASG-VDLDELLPIAEPLLSDLPRL 282 (503)
Q Consensus 204 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~l~~~~~~~l~~~ 282 (503)
..+|..++.+.+...+- +...+.....+.++.++.+++..|...++++..+.+.++| ++.+++.++++.....++..
T Consensus 630 ~~~p~~~~~~~l~~l~~--~~~~s~~e~~~~l~~v~~~e~~~f~~~l~~~~~lE~lv~Gn~~~~da~~l~~~~~~~l~~~ 707 (937)
T COG1025 630 TGKPYRQALDGLTGLLQ--VPYWSREERRNALESVSVEEFAAFRDTLLNGVHLEMLVLGNLTEADATNLAETLQKKLPAI 707 (937)
T ss_pred hcCCHHHHHHHhhhhhC--CCCcCHHHHHHHhhhccHHHHHHHHHHhhhccceeeeeeccchHHHHHHHHHHHHhhhccc
Confidence 58999999998888774 2233333456889999999999999999999999999999 99999999988776656543
Q ss_pred CCCCCC-CC--CccCCceEE--cCCCC-ceEEEEEeeeCCCCCCCchhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHH
Q 010710 283 PPPTEP-KS--VYIGGDYRQ--QADSP-ETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLR 356 (503)
Q Consensus 283 ~~~~~~-~~--~~~~~~~~~--~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~ 356 (503)
...... +. ...++.... ..+.+ .+..++.+...- .+.++.+...++.+++. ..+|.+
T Consensus 708 ~s~~~~~~~~~~~~~~~~~~e~~~~~~~~an~~i~~~~~~--~~~~~~a~s~Ll~~l~~---------------~~ff~~ 770 (937)
T COG1025 708 GSTWYRNPSVYLLKGGTRIFETVGGESDSANAAILYPQQY--DEIKSSALSSLLGQLIH---------------PWFFDQ 770 (937)
T ss_pred CCcccCCCceeccCCCeeEeeeccCCcccccceeEecccc--chHHHHHHHHHHHHHHh---------------HHhHHH
Confidence 321111 11 112332221 22333 333344444332 23667777789999998 999999
Q ss_pred HHhhcCCeEEEEeeeccccCcceEEEEEEeC---cchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHccCC
Q 010710 357 VLNEYQQIQSFSAFNSIFNNTGLFGIYACTG---SDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLES 433 (503)
Q Consensus 357 lR~~~~~~Y~~~a~~~~~~~~~~f~i~~~~~---p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~ 433 (503)
||+|+|++|.|+++.....+...+.++++++ |+...+.+..|++.+..... ++++++|+..|..+++++.....+
T Consensus 771 LRTkeQLGY~Vfs~~~~v~~~~gi~f~vqS~~~~p~~L~~r~~~F~~~~~~~l~--~ms~e~Fe~~k~alin~il~~~~n 848 (937)
T COG1025 771 LRTKEQLGYAVFSGPREVGRTPGIGFLVQSNSKSPSYLLERINAFLETAEPELR--EMSEEDFEQIKKALINQILQPPQN 848 (937)
T ss_pred hhhhhhcceEEEecceeecCccceEEEEeCCCCChHHHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHccCCC
Confidence 9999999999999999888887788888888 77889999999999988887 599999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhCCcCC-HHHHHHHHccCCHHHHHHHHHHhhcCCceEEEE
Q 010710 434 RVIVSEDIGRQILTYGERKS-VDQFLSVLEHITLDDITNIAQKIISSPLTMASY 486 (503)
Q Consensus 434 ~~~~~~~~~~~~~~~g~~~~-~~~~~~~i~~vT~~di~~~a~~~l~~~~~~~~~ 486 (503)
....+.++|..+..+....+ ++..++.++.+|.+++.++....+.......+.
T Consensus 849 l~e~a~r~~~~~~~g~~~Fd~~ek~i~~vk~LT~~~l~~f~~~~l~~~~g~~l~ 902 (937)
T COG1025 849 LAEEASRLWKAFGRGNLDFDHREKKIEAVKTLTKQKLLDFFENALSYEQGSKLL 902 (937)
T ss_pred HHHHHHHHHHHhccCCCCcCcHHHHHHHHHhcCHHHHHHHHHHhhcccccceee
Confidence 99999999966553333343 688999999999999999999999866443333
No 12
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=2.3e-22 Score=212.70 Aligned_cols=403 Identities=15% Similarity=0.119 Sum_probs=326.3
Q ss_pred CCCCCCccCCCCCCCCC---CCCCCC-CCceEEEEcCCCcEEEEe-cCC--CCeEEEEEEEeccccCCCCCCCcHHHHHH
Q 010710 50 SLPSLDTPLEGVSFPPS---LPDFVE-PGKVKVTTLENGIRIASE-TSV--SPAASIGLYLDFGSVYETPSSCGASNLLE 122 (503)
Q Consensus 50 ~~~~l~~plp~~~~p~~---~~~~~~-~~~~~~~~L~NG~~v~~~-~~~--~~~~~i~l~~~~G~~~e~~~~~g~a~l~~ 122 (503)
..+.++.|.|+.+||.. .+.+++ ...++.+.-....++|.+ ++. .|++.+.+.+.+..+..++...+++.++.
T Consensus 480 ~~~~l~lP~~nefI~t~f~~~~~~~~~~~~P~Li~~~~~~~lw~k~dd~f~~Pka~~~~~~~~p~~~~~~~~~~l~~l~~ 559 (974)
T KOG0959|consen 480 LNPELHLPTPNEFIPTDFSILPAPIPKLEYPVLISDTPFSELWYKQDDKFNVPKAYTKFDFICPGATQSPLNSVLSTLYV 559 (974)
T ss_pred ccccccCCCCCcccccccccccccCccccCCeeeecCCcceeEEecccccccchhheeeeecCcccccCHHHHHHHHHHH
Confidence 33679999999998851 122211 123455555567899954 444 48999999999999999999999999999
Q ss_pred HHHcccCCCCCHHHHHHHHHHcCCeeeEeeccceEEEEEecccCCHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHhHh
Q 010710 123 KMAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGE 202 (503)
Q Consensus 123 ~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~ 202 (503)
.++ .....+..+.+...|..+..+.+..+..+++.++++++..+++.+.+++.+...++++|+..++.+.+++++
T Consensus 560 ~~l-----~d~l~E~~Y~A~~aGl~~~~~~s~~G~~~~v~Gfnekl~~ll~~~~~~~~~f~~~~~rf~iike~~~~~~~n 634 (974)
T KOG0959|consen 560 RLL-----KDQLNEYLYPALLAGLTYSLSSSSKGVELRVSGFNEKLPLLLEKVVQMMANFELDEDRFEIIKELLKRELRN 634 (974)
T ss_pred HHH-----HHHHhHHHHHHHhccceEEeeecCCceEEEEeccCcccHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhh
Confidence 999 555566777888899999999999999999999999999999999999999999999999999999999998
Q ss_pred -hhCChHHHHHHHHHHHhcCCCCCCCCCCChhhhcCCCHHHHHHHHHhhcCCCCeEEEEeC-CChHHHHHHHHhhcCCCC
Q 010710 203 -LHNNPQGLLLEAIHSTGYAGALGNPLLAPESALNRLDGTILEEIVAENFTAPRMVLAASG-VDLDELLPIAEPLLSDLP 280 (503)
Q Consensus 203 -~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~l~~~~~~~l~ 280 (503)
...+|+.++.+.++..+-...+ +.....+.++.++.+++..|...++++..++++|+| ++++++..+++.....+
T Consensus 635 ~~~~~p~~~a~~~~~lll~~~~W--~~~e~~~al~~~~le~~~~F~~~~~~~~~~e~~i~GN~te~~A~~l~~~v~d~l- 711 (974)
T KOG0959|consen 635 HAFDNPYQLANDYLLLLLEESIW--SKEELLEALDDVTLEDLESFISEFLQPFHLELLIHGNLTEKEALQLLKSVLDIL- 711 (974)
T ss_pred hhhccHHHHHHHHHHHHhhcccc--chHHHHHHhhcccHHHHHHHHHHHhhhhheEEEEecCcchHHHHHHHHHHHhhh-
Confidence 6688998888877766643333 333456888999999999999999999999999999 99999999866655544
Q ss_pred CCCCCCC-C----------CCCccCC-ceEE----cCCCCceEEEEEeeeCCCCCCCchhHHHHHHHHhcCCCCCCCCCC
Q 010710 281 RLPPPTE-P----------KSVYIGG-DYRQ----QADSPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGG 344 (503)
Q Consensus 281 ~~~~~~~-~----------~~~~~~~-~~~~----~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg 344 (503)
+...+.. + ....+.| .+.+ ....+++.+.+++++.. .+.++.+.+.++.+++.
T Consensus 712 ~~~~~~~~p~~~~~~~~~~~~~lp~G~~~~~~~~~n~~~~ns~i~~~~Q~~~--~~~~~~~~~~L~~~li~--------- 780 (974)
T KOG0959|consen 712 KSAAPNSRPLFRSEHLPRREIQLPNGDYYFYRHLLNKTDDNSCIEVYYQIGV--QDTRDNAVLGLLEQLIK--------- 780 (974)
T ss_pred hccCCCCccccccccCcccceeccCCceEEEEcccccCCCCceEEEEEEccc--chhHHHHHHHHHHHHhc---------
Confidence 2222111 1 0112222 2221 23357888889999754 67899999999999999
Q ss_pred CCCCcccHHHHHHHhhcCCeEEEEeeeccccCcceEEEEEEeC--cchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHH
Q 010710 345 PGKGMHTRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYACTG--SDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEA 422 (503)
Q Consensus 345 ~g~g~~s~L~~~lR~~~~~~Y~~~a~~~~~~~~~~f~i~~~~~--p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~ 422 (503)
.++|+.||++.+++|.+++......+.-.+.+.+++. ++.+++.|..+++.+.+... ++++++++.-+..
T Consensus 781 ------ep~Fd~LRTkeqLGYiv~~~~r~~~G~~~~~i~Vqs~~~~~~le~rIe~fl~~~~~~i~--~m~~e~Fe~~~~~ 852 (974)
T KOG0959|consen 781 ------EPAFDQLRTKEQLGYIVSTGVRLNYGTVGLQITVQSEKSVDYLEERIESFLETFLEEIV--EMSDEEFEKHKSG 852 (974)
T ss_pred ------cchHHhhhhHHhhCeEeeeeeeeecCcceeEEEEccCCCchHHHHHHHHHHHHHHHHHH--hcchhhhhhhHHH
Confidence 8999999999999999999988877766677766655 78999999999999998888 6999999999999
Q ss_pred HHHHHHHccCChHHHHHHHHHHHHHhCCcCC-HHHHHHHHccCCHHHHHHHHHHhhcC
Q 010710 423 TKSAVLMNLESRVIVSEDIGRQILTYGERKS-VDQFLSVLEHITLDDITNIAQKIISS 479 (503)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~i~~vT~~di~~~a~~~l~~ 479 (503)
+|.....+.++......++|..+..+..... .+...+.+..+|++|+..+...++..
T Consensus 853 lI~~~~ek~~~l~~e~~~~w~ei~~~~y~f~r~~~~v~~l~~i~k~~~i~~f~~~~~~ 910 (974)
T KOG0959|consen 853 LIASKLEKPKNLSEESSRYWDEIIIGQYNFDRDEKEVEALKKITKEDVINFFDEYIRK 910 (974)
T ss_pred HHHHHhhcCcchhHHHHHHHHHHHhhhhcchhhHHHHHHHHhhhHHHHHHHHHhhccc
Confidence 9999999999999999999999885555444 36678889999999999999999973
No 13
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.91 E-value=1.1e-21 Score=204.79 Aligned_cols=393 Identities=10% Similarity=0.083 Sum_probs=294.8
Q ss_pred ceEEEEcCCCcEEEEecCCCCeEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCCHHHHHHHHHHcC--CeeeEee
Q 010710 75 KVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIG--GSILASA 152 (503)
Q Consensus 75 ~~~~~~L~NG~~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s~~~l~~~l~~~g--~~~~~~~ 152 (503)
.+....-++|+++++-.++.+...+.+.++.- +.+..|++|++||+++.|+.+++..+..-.+.... --+||.|
T Consensus 21 ~~~~~H~~TGa~l~hi~~~d~~~vFsi~F~T~----p~dstGVaHiLEHtvlcGS~kYPvkdPF~~ml~rSLntF~NA~T 96 (978)
T COG1026 21 GYILEHEKTGAELAHIKNEDPNNVFSIAFKTE----PHDSTGVAHILEHTVLCGSKKYPVKDPFFKMLKRSLNTFLNAFT 96 (978)
T ss_pred eEEEeeccCCceEEEecCCCcCceEEEEeecC----CCCCCCcchHHHHHhhhCCCCCCCCChHHHHHHHhHHHHHhhcc
Confidence 44555556899999777777766667777554 45567999999999999999999888766665543 3489999
Q ss_pred ccceEEEEEeccc-CCHHHHHHHHHHhhcCCCCChHHHHHH--------------HHHHHHHhHhhhCChHHHHHHHHHH
Q 010710 153 SREQMGYSFDALK-TYVPEMVELLVDCVRNPVFLDWEVNEE--------------LRKLKSELGELHNNPQGLLLEAIHS 217 (503)
Q Consensus 153 ~~~~~~~~~~~~~-~~l~~~l~ll~~~~~~p~f~~~~~~~~--------------k~~~~~e~~~~~~~p~~~~~~~~~~ 217 (503)
..|.|+|.+++.. ++.-.++.+.+|.+.+|...++.|.++ +..|..|.+....++...+++.+.+
T Consensus 97 ~~D~T~YP~sS~~~~Df~NLl~VYlDavf~PlL~~e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~ss~~~~~~~~~~~ 176 (978)
T COG1026 97 FPDKTVYPASSANEKDFYNLLSVYLDAVFHPLLTKESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYSSGESVLSRAMQQ 176 (978)
T ss_pred CCCcceeeccccCcchHHHHHHHHHHhhhCcccchHHHhhhhhccccCCCccceeeeEEeehhcccccCchhHHHHHHHH
Confidence 9999999998875 689999999999999999999988765 3345566677778999999999999
Q ss_pred Hhc-CCCCCCCCCCChhhhcCCCHHHHHHHHHhhcCCCCeEEEEeC-CChHHHHHHHHhh-cCCCCCCCCCCC--CCCCc
Q 010710 218 TGY-AGALGNPLLAPESALNRLDGTILEEIVAENFTAPRMVLAASG-VDLDELLPIAEPL-LSDLPRLPPPTE--PKSVY 292 (503)
Q Consensus 218 ~~~-~~~~~~~~~~~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~l~~~~-~~~l~~~~~~~~--~~~~~ 292 (503)
.+| +..|+....|.+..|..++.+++++||+++|+|+|+.++++| ++.++.++.++.. +...++...... +...+
T Consensus 177 slfp~~ty~~~SGG~P~~I~~LtyE~~r~FHkk~Y~pSN~~i~~yGni~~~~~L~~iee~~l~~~~k~~~~~~i~~~~~~ 256 (978)
T COG1026 177 SLFPGTTYGVNSGGDPKNIPDLTYEEFRAFHKKHYHPSNCKIFVYGNIPTERLLDFIEEKVLRPFGKRELDVPIPDQKAF 256 (978)
T ss_pred hhCCCccccccCCCCcccccccCHHHHHHHHHHhCCccceEEEEECCCCHHHHHHHHHHhhhccccccccCCCCCccccc
Confidence 999 889998889999999999999999999999999999999999 9999999999987 554443331111 11111
Q ss_pred c---CCceE--E---cCCCCceEEEEEeeeCCCCCCCchhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhcCCe
Q 010710 293 I---GGDYR--Q---QADSPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQI 364 (503)
Q Consensus 293 ~---~~~~~--~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~~~~ 364 (503)
. ..... + ..+..++.+.+.|-++. ..+..+..++.||..+|-++.+ ++|.++|.+. |++
T Consensus 257 ~~~~~~~~~ypi~~~~~de~q~~~~lsWl~~~-~~d~~~~lal~vL~~iLl~~~a-----------sPl~~~lies-glg 323 (978)
T COG1026 257 KKPRRKVLEYPISFDEEDEDQGLLSLSWLGGS-ASDAEDSLALEVLEEILLDSAA-----------SPLTQALIES-GLG 323 (978)
T ss_pred CcccccceeeccCCCCCCCceeEEEEEEecCC-cccHHHHHHHHHHHHHHccCcc-----------cHHHHHHHHc-CCC
Confidence 1 11111 1 23467888999999986 3467889999999999998876 9999999976 444
Q ss_pred -EEEEeeeccccCcceEEEEEEe-CcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHccCChHHH--HHH
Q 010710 365 -QSFSAFNSIFNNTGLFGIYACT-GSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLESRVIV--SED 440 (503)
Q Consensus 365 -Y~~~a~~~~~~~~~~f~i~~~~-~p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~~~~~--~~~ 440 (503)
+.+...+...--...|.+.++. +.++.++.-+.+++.++++..+| ++.+.++.++.++.-.+......+... +.+
T Consensus 324 ~~~~~g~~~~~~~~~~f~v~~~gv~~ek~~~~k~lV~~~L~~l~~~g-i~~~~ie~~~~q~E~s~ke~~s~pfgl~l~~~ 402 (978)
T COG1026 324 FADVSGSYDSDLKETIFSVGLKGVSEEKIAKLKNLVLSTLKELVKNG-IDKKLIEAILHQLEFSLKEVKSYPFGLGLMFR 402 (978)
T ss_pred cccccceeccccceeEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHhhhhhcCCCccHHHHHH
Confidence 3333333333345566666544 45788888899999999999999 999999999999888877764444332 334
Q ss_pred HHHHHHHhCCcCCH---HHHHHHHccCCHHH--HHHHHHHhhcCCceEEE
Q 010710 441 IGRQILTYGERKSV---DQFLSVLEHITLDD--ITNIAQKIISSPLTMAS 485 (503)
Q Consensus 441 ~~~~~~~~g~~~~~---~~~~~~i~~vT~~d--i~~~a~~~l~~~~~~~~ 485 (503)
+...+++++.+.+. ..+.+.+++--..+ +.+..++||-.++..+.
T Consensus 403 ~~~gw~~G~dp~~~Lr~~~~~~~Lr~~le~~~~fe~LI~ky~l~N~h~~~ 452 (978)
T COG1026 403 SLYGWLNGGDPEDSLRFLDYLQNLREKLEKGPYFEKLIRKYFLDNPHYVT 452 (978)
T ss_pred hccccccCCChhhhhhhHHHHHHHHHhhhcChHHHHHHHHHhhcCCccEE
Confidence 44455556666432 34444444444444 99999999987663333
No 14
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.89 E-value=9.1e-21 Score=197.98 Aligned_cols=395 Identities=22% Similarity=0.218 Sum_probs=271.2
Q ss_pred CCCCCCCCceEEEEcCCCcEEEEec-CCCCeEEEEEEEeccccCCCCCCCcHHHHHHHHH-cccCCCCCHHHHHHHHHHc
Q 010710 67 LPDFVEPGKVKVTTLENGIRIASET-SVSPAASIGLYLDFGSVYETPSSCGASNLLEKMA-FKSTKNRSHLRIVREVEAI 144 (503)
Q Consensus 67 ~~~~~~~~~~~~~~L~NG~~v~~~~-~~~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~-~~gt~~~s~~~l~~~l~~~ 144 (503)
+|..++. ..-.+.-.|..+|+..+ .+++.+++.++++.+....+ ......|+...+ ..||.++++.++..+++.+
T Consensus 519 vp~~~~k-~~l~~~~~~~~~v~~~~~~tn~i~yl~~~~~~~~l~~~--llpyL~L~~~~l~~lgt~~~~y~e~~~~i~~~ 595 (978)
T COG1026 519 VPDPIEK-TSLETEVSNEAKVLHHDLFTNGITYLRLYFDLDMLPSE--LLPYLPLFAFALTNLGTETYSYKELLNQIERH 595 (978)
T ss_pred CCCcccc-cceeeeccCCcceEEeecCCCCeEEEEEEeecCCCChh--hhhhHHHHHHHHHhcCCCCcCHHHHHHHHHHH
Confidence 3455444 23445556778887554 45779999999999665544 444556666666 5599999999999999998
Q ss_pred CCeeeEeec-----------cceEEEEEecccCCHHHHHHHHHHhhcCCCC-ChHHHHHHHHHHHHHhHhhh-CChHHHH
Q 010710 145 GGSILASAS-----------REQMGYSFDALKTYVPEMVELLVDCVRNPVF-LDWEVNEELRKLKSELGELH-NNPQGLL 211 (503)
Q Consensus 145 g~~~~~~~~-----------~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f-~~~~~~~~k~~~~~e~~~~~-~~p~~~~ 211 (503)
.|+++++.+ +..++++++++.++.+++++++.+++.++.| |.++++...++....+.... +.+...+
T Consensus 596 TGgis~~~~~~~~~~~~~~~~~~~~i~~K~l~~k~~~~~~~i~~~l~~~~F~D~~Rlkell~q~~~~l~~~vr~sG~~~A 675 (978)
T COG1026 596 TGGISVSLSVDTDPGDDGEYRPSFSISGKALRSKVEKLFELIREILANTDFHDRERLKELLEQYLSDLTSSVRNSGHSIA 675 (978)
T ss_pred hCCceeeEeeccCCCccccccceEEEEEEehhhhhhHHHHHHHHHHhcCCcCcHHHHHHHHHHHHhhhHHhhhccchHHH
Confidence 776666543 3468999999999999999999999999999 66777777777777777544 4477776
Q ss_pred HHHHHHHhc-CCCCCCCCCCC--hhhhcCC--------C---HHHHHHHHHhhcCCCCeEEEEeC-CChHHHHHHH-Hhh
Q 010710 212 LEAIHSTGY-AGALGNPLLAP--ESALNRL--------D---GTILEEIVAENFTAPRMVLAASG-VDLDELLPIA-EPL 275 (503)
Q Consensus 212 ~~~~~~~~~-~~~~~~~~~~~--~~~l~~l--------~---~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~l~-~~~ 275 (503)
.....+.++ ...+.....|. .+-|..+ . .+.|++.+++++..+++-+++.| .+ ++.+.+ .++
T Consensus 676 ~~~~~s~~~~~~~l~e~~~Gl~q~k~i~~l~~~~~~~~~~ei~~kL~~l~~~i~~~~n~~i~i~~~~~--~~~~~~e~~l 753 (978)
T COG1026 676 SSLANSRLSSAGALKELLNGLSQVKFLRELSSNFEENFEKEIADKLQALRKKIFQTNNLRIAIIGDID--KILDLLENPL 753 (978)
T ss_pred HHHhhcccccchhHHHHhcChhHHHHHHHHHHhhcccccHHHHHHHHHHHHHHhhcCceEEEEecChh--hhHHHHHHHh
Confidence 666666655 33332221111 1111111 1 46788899999999999777777 32 222333 333
Q ss_pred cCCCC----CCCCCCCCC---CCccC-CceEEcCCCCceEEEEEeeeCCCCCCCchhHHHHHHHHhcCCCCCCCCCCCCC
Q 010710 276 LSDLP----RLPPPTEPK---SVYIG-GDYRQQADSPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGK 347 (503)
Q Consensus 276 ~~~l~----~~~~~~~~~---~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg~g~ 347 (503)
+...+ ....+..+. ....+ .......+.+..+..++|+.....+++++++++.|++++|+.
T Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~p~a~~~l~fs~~~~~y~hpd~~~l~vls~~L~~----------- 822 (978)
T COG1026 754 LKFLEHLLPGFELPTPPKNPHLDLISSLSEATIIPSPVAYNALAFSIGGLPYTHPDYAALQVLSEYLGS----------- 822 (978)
T ss_pred hhhhcccCcccccCCCCCCcchhhhccccceEEeccHHHHHHHhhhccCCCCCCccchHHHHHHHHhcc-----------
Confidence 33221 111111111 11111 112222334445555667554444789999999999999995
Q ss_pred CcccHHHHHHHhhcCCeEEEEeeeccccCcceEEEEEEeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHH
Q 010710 348 GMHTRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAV 427 (503)
Q Consensus 348 g~~s~L~~~lR~~~~~~Y~~~a~~~~~~~~~~f~i~~~~~p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~ 427 (503)
..||.+||++ |++||+++... .+.|.|.++...+|+ ..+.++.+.+.++.++.+ .+++.++++++-..++.+
T Consensus 823 ---~~lw~~IR~~-GGAYGa~as~~--~~~G~f~f~sYRDPn-~~kt~~v~~~~v~~l~s~-~~~~~d~~~~ilg~i~~~ 894 (978)
T COG1026 823 ---GYLWNKIREK-GGAYGASASID--ANRGVFSFASYRDPN-ILKTYKVFRKSVKDLASG-NFDERDLEEAILGIISTL 894 (978)
T ss_pred ---chhHHHHHhh-ccccccccccc--cCCCeEEEEecCCCc-HHHHHHHHHHHHHHHHcC-CCCHHHHHHHHHHhhccc
Confidence 8999999998 55998877754 456788888888888 778888888888888886 599999999999999887
Q ss_pred HHccCChHHHHHHHHHHHHHhCCcCCHHHHHHHHccCCHHHHHHHHHHhhc---CCceEEEE
Q 010710 428 LMNLESRVIVSEDIGRQILTYGERKSVDQFLSVLEHITLDDITNIAQKIIS---SPLTMASY 486 (503)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~vT~~di~~~a~~~l~---~~~~~~~~ 486 (503)
.+. +++......-..+.+.+-.+..++.++++|..||++||++++++|+. +..+++++
T Consensus 895 d~p-~sp~~~~~~s~~~~~sg~~~~~~qa~re~~l~vt~~di~~~~~~yl~~~~~e~~i~~~ 955 (978)
T COG1026 895 DTP-ESPASEGSKSFYRDLSGLTDEERQAFRERLLDVTKEDIKEVMDKYLLNFSSENSIAVF 955 (978)
T ss_pred ccc-cCCcceehhhHHHHHhcCCHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccceEEEE
Confidence 664 45555553333333323334457889999999999999999999997 45666666
No 15
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.88 E-value=1e-21 Score=170.58 Aligned_cols=146 Identities=35% Similarity=0.560 Sum_probs=138.4
Q ss_pred EEEEecC-CCCeEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCCHHHHHHHHHHcCCeeeEeeccceEEEEEecc
Q 010710 86 RIASETS-VSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDAL 164 (503)
Q Consensus 86 ~v~~~~~-~~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~ 164 (503)
||++..+ ..+.+.+.+++++|+.+|++...|++||+++|+++|+.+++..++.+.++..|+.++++++++++.|.++++
T Consensus 1 ~V~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs~~~~~~~l~~~l~~~G~~~~~~t~~d~t~~~~~~~ 80 (149)
T PF00675_consen 1 KVVLVEDPGSPVVSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGSKKYSSDELQEELESLGASFNASTSRDSTSYSASVL 80 (149)
T ss_dssp EEEEEESTTSSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSBHHHHHHHHHHTTCEEEEEEESSEEEEEEEEE
T ss_pred CEEEEEcCCCCEEEEEEEEeeccCCCCCCCCchhhhhhhhcccccchhhhhhhHHHhhhhccccceEecccceEEEEEEe
Confidence 6775555 678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHhHhhhCChHHHHHHHHHHHhc-CCCCCCCCCCC
Q 010710 165 KTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGY-AGALGNPLLAP 231 (503)
Q Consensus 165 ~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~ 231 (503)
+++++.+|+++.+++.+|.|++++|+++|..+..++++...+|...+.+.++..+| ++||+++..|+
T Consensus 81 ~~~~~~~l~~l~~~~~~P~f~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~~p~~~~~~~~ 148 (149)
T PF00675_consen 81 SEDLEKALELLADMLFNPSFDEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFRGHPYGNPLLGP 148 (149)
T ss_dssp GGGHHHHHHHHHHHHHSBGGCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSGGGSHSS-T
T ss_pred cccchhHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhccCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999 99999998876
No 16
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.87 E-value=4.5e-21 Score=172.43 Aligned_cols=173 Identities=25% Similarity=0.404 Sum_probs=144.9
Q ss_pred CCCHHHHHHHHHhhcCCCCeEEEEeC-CChHHHHHHHHhhcCCCCCCC---CCCC--CC-C--CccCCceEE-cCCCCce
Q 010710 237 RLDGTILEEIVAENFTAPRMVLAASG-VDLDELLPIAEPLLSDLPRLP---PPTE--PK-S--VYIGGDYRQ-QADSPET 306 (503)
Q Consensus 237 ~l~~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~l~~~~~~~l~~~~---~~~~--~~-~--~~~~~~~~~-~~~~~~~ 306 (503)
++|.++|++||++||.|++|+++++| ++++++.++++++|+.|+... .... .. + ...+..... ..+.+++
T Consensus 1 ~it~e~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (184)
T PF05193_consen 1 NITLEDLRAFYKKFYRPSNMTLVIVGDIDPDELEKLIEKYFGSLPKSSIPPKPKPRSPPLPPSEPQGKEIVIPSKDESQS 80 (184)
T ss_dssp C--HHHHHHHHHHHSSGGGEEEEEEESSGHHHHHHHHHHHHTTSSHSCHGGSSSCSSSSSSCGGSSEEEEEEEESSSSSE
T ss_pred CCCHHHHHHHHHHhcCccceEEEEEcCccHHHHHHHHHhhhhhhcccccccccccccccccccccccccccccccccccc
Confidence 47899999999999999999999999 999999999999999998653 1111 11 1 111222222 2334899
Q ss_pred EEEEEeeeCCCCC-CCchhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEeeeccccCcceEEEEEE
Q 010710 307 HIALAFEVPGGWL-KDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYAC 385 (503)
Q Consensus 307 ~v~~~~~~~~~~~-~~~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~~~~Y~~~a~~~~~~~~~~f~i~~~ 385 (503)
.+.++|++++ . +.++..++.++.++|+++ ++++|+..||++.+++|++.++...+.+.+.|.++++
T Consensus 81 ~v~~~~~~~~--~~~~~~~~~~~~l~~~l~~~-----------~~s~l~~~lr~~~~l~y~v~~~~~~~~~~~~~~i~~~ 147 (184)
T PF05193_consen 81 IVSIAFPGPP--IKDSKDYFALNLLSSLLGNG-----------MSSRLFQELREKQGLAYSVSASNSSYRDSGLFSISFQ 147 (184)
T ss_dssp EEEEEEEEEE--TGTSTTHHHHHHHHHHHHCS-----------TTSHHHHHHHTTTTSESEEEEEEEEESSEEEEEEEEE
T ss_pred cccccccccc--ccccchhhHHHHHHHHHhcC-----------ccchhHHHHHhccccceEEEeeeeccccceEEEEEEE
Confidence 9999999997 5 889999999999999976 4599999999999999999999777778899999999
Q ss_pred eCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHH
Q 010710 386 TGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEAT 423 (503)
Q Consensus 386 ~~p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~ 423 (503)
+.|++..++++.+.+++.++.+.| ++++||+++|+++
T Consensus 148 ~~~~~~~~~~~~~~~~l~~l~~~~-~s~~el~~~k~~L 184 (184)
T PF05193_consen 148 VTPENLDEAIEAILQELKRLREGG-ISEEELERAKNQL 184 (184)
T ss_dssp EEGGGHHHHHHHHHHHHHHHHHHC-S-HHHHHHHHHHH
T ss_pred cCcccHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHhcC
Confidence 999999999999999999999987 9999999999875
No 17
>PTZ00432 falcilysin; Provisional
Probab=99.85 E-value=6.9e-19 Score=196.27 Aligned_cols=381 Identities=15% Similarity=0.094 Sum_probs=258.8
Q ss_pred EcCCCcEEEEecCCC-CeEEEEEEEeccccCCCCCCCcHHHHHHHHHcc-cCCCCCHHHHHHHHHHcCCeeeEe----ec
Q 010710 80 TLENGIRIASETSVS-PAASIGLYLDFGSVYETPSSCGASNLLEKMAFK-STKNRSHLRIVREVEAIGGSILAS----AS 153 (503)
Q Consensus 80 ~L~NG~~v~~~~~~~-~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~-gt~~~s~~~l~~~l~~~g~~~~~~----~~ 153 (503)
...+|++|+.++.++ ..+++.++++.....+. ......|+..++.. ||.++++.++...++...|+++++ .+
T Consensus 664 ~~~~~~~~~~~~~~TnGi~y~~~~fdl~~l~~e--~~~yl~L~~~~l~~~gT~~~s~~el~~~i~~~tGg~~~~~~~~~~ 741 (1119)
T PTZ00432 664 SDGGSVTVLVHPIESRGILYLDFAFSLDSLTVD--ELKYLNLFKALLKENGTDKLSSEEFTYKREKNLGGLSASTAFYSE 741 (1119)
T ss_pred ccCCCcceEEEecCCCCeEEEEEEecCCCCCHH--HHhhHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCeEEEEEEecc
Confidence 345899999766664 59999999999976553 55567778777755 999999999999999987776654 22
Q ss_pred ------------cceEEEEEecccCCHHHHHHHHHHhhcCCCCChHH-HHHHHHHHHHHhHhhh-CChHHHHHHHHHHHh
Q 010710 154 ------------REQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWE-VNEELRKLKSELGELH-NNPQGLLLEAIHSTG 219 (503)
Q Consensus 154 ------------~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~-~~~~k~~~~~e~~~~~-~~p~~~~~~~~~~~~ 219 (503)
...+.++++++.++++++++++.+++.++.|++.+ +....++.+..+.+.. ++....+...+.+..
T Consensus 742 ~~~~~~~~~~~~~~~~~v~~k~l~~~~~~~~~l~~eil~~~~f~d~~rl~~il~~~~~~~~~~~~~~Gh~~A~~~~~s~~ 821 (1119)
T PTZ00432 742 TNNLTYDDPYNGVGYLNVRAKVLKHKVNEMVDIVLEALKDADFSNSKKGVEILKRKINGMKTVFSSKGHKFALKRMKSKF 821 (1119)
T ss_pred ccccccCcccccceEEEEEEEEhhhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcC
Confidence 23689999999999999999999999999998755 7777777766666433 355444443332211
Q ss_pred cCCCCCCCC-CC--ChhhhcCC-------C----HHHHHHHHHhhcCCCCeEEEEeC-C-ChHHHHHHHHhhcCCCCCC-
Q 010710 220 YAGALGNPL-LA--PESALNRL-------D----GTILEEIVAENFTAPRMVLAASG-V-DLDELLPIAEPLLSDLPRL- 282 (503)
Q Consensus 220 ~~~~~~~~~-~~--~~~~l~~l-------~----~~~l~~f~~~~~~~~~~~l~i~G-~-~~~~l~~l~~~~~~~l~~~- 282 (503)
....+.... .| ...-|+.+ + .+.|.++++.+|+.+++.+.++| . ..+.+.+.+..++..++..
T Consensus 822 S~~~~~~e~~~G~~~~~fl~~l~~~~~e~~~~~v~~~L~~i~~~i~~~~~l~~~vt~~~~~~~~~~~~~~~~~~~l~~~~ 901 (1119)
T PTZ00432 822 SVSDYADELVNGYSQLLFLKETLVPLAEKDWSKVESKLNEIRNKLLSMKNLTVNVTGDSELLDSLLDDSTTFLKKLSSTF 901 (1119)
T ss_pred CHHHHHHHHhcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCcCCcEEEEEeCHHHHHHHHHHHHHHHHhccccc
Confidence 100000000 11 01111111 1 34577888999999999999999 4 5667777666677666421
Q ss_pred ---C--CCC-CCCC------CccC--CceEEcCCCCceEEEEEeeeCCCCCCCchhHHHHHHHHhcCCCCCCCCCCCCCC
Q 010710 283 ---P--PPT-EPKS------VYIG--GDYRQQADSPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKG 348 (503)
Q Consensus 283 ---~--~~~-~~~~------~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg~g~g 348 (503)
. ... .... .+.. ....+..+....++..+..... ..+++.+++.|+.++|..
T Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~p~~V~yv~~~~~~~~--~~~~~~~~l~Vl~~~L~~------------ 967 (1119)
T PTZ00432 902 KENDNKSSDKVWVKEVLDKKLMESVDKNEFIVLPTRVNFVGMGGKLFD--KSDKVDGSFQVIVHYLKN------------ 967 (1119)
T ss_pred ccccccccccccccccccccccCCcccceEEEccCceeEEEEeccccc--CCCccCHHHHHHHHHHcc------------
Confidence 1 010 0010 0111 1222334555666666644333 467779999999999995
Q ss_pred cccHHHHHHHhhcCCeEEEEeeeccccCcceEEEEEEeCcchHHHHHHHHHHHHHHhhC--CCCCCHHHHHHHHHHHHHH
Q 010710 349 MHTRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIAT--PKQVTQVQLNRAKEATKSA 426 (503)
Q Consensus 349 ~~s~L~~~lR~~~~~~Y~~~a~~~~~~~~~~f~i~~~~~p~~~~~~~~~~~~~l~~~~~--~g~i~~~el~~ak~~~~~~ 426 (503)
..||++||++.| +||+++... ..|.|.++...+|. ..+.++.+.+....+.. . .+|++++++++.+.++.
T Consensus 968 --~yLw~~IR~~GG-AYG~~~~~~---~~G~~~f~SYRDPn-~~~Tl~~f~~~~~~l~~~~~-~~~~~~l~~~iig~~~~ 1039 (1119)
T PTZ00432 968 --SYLWKTVRMSLG-AYGVFADLL---YTGHVIFMSYADPN-FEKTLEVYKEVASALREAAE-TLTDKDLLRYKIGKISN 1039 (1119)
T ss_pred --ccchHHHcccCC-ccccCCccC---CCCeEEEEEecCCC-HHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhc
Confidence 899999999855 999986543 24777777777776 55666666666665554 3 49999999999999999
Q ss_pred HHHccCChHHHHHHHHHHHHHhCC-cCCHHHHHHHHccCCHHHHHHHHHHhhc--CCceEEEE
Q 010710 427 VLMNLESRVIVSEDIGRQILTYGE-RKSVDQFLSVLEHITLDDITNIAQKIIS--SPLTMASY 486 (503)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~i~~vT~~di~~~a~~~l~--~~~~~~~~ 486 (503)
+.... ++..........++ .|. ...++++++.|-++|++||+++|+++.. ....++++
T Consensus 1040 ~D~p~-~p~~~g~~~~~~~l-~g~t~e~rq~~R~~il~~t~edi~~~a~~~~~~~~~~~~~v~ 1100 (1119)
T PTZ00432 1040 IDKPL-HVDELSKLALLRII-RNESDEDRQKFRKDILETTKEDFYRLADLMEKSKEWEKVIAV 1100 (1119)
T ss_pred cCCCC-ChHHHHHHHHHHHH-cCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhccCeEEEE
Confidence 87755 55555544443434 454 4568999999999999999999999997 33344444
No 18
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=6.1e-18 Score=167.77 Aligned_cols=396 Identities=14% Similarity=0.119 Sum_probs=279.1
Q ss_pred CCcEEEEecCCCCeEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCCHHHHHHHHHHcC-CeeeEeeccceEEEEE
Q 010710 83 NGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIG-GSILASASREQMGYSF 161 (503)
Q Consensus 83 NG~~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s~~~l~~~l~~~g-~~~~~~~~~~~~~~~~ 161 (503)
-|++|++-.++++.+.-...+. .|...+.|+.|-+|||+|+|+++++...+...+.... ++.|+.++.+++.|+.
T Consensus 28 Tkl~va~~~~pts~vhG~f~v~----TEa~~d~G~PHTLEHL~FMGSKkYP~kGvLd~~anr~l~dtNAwTDtD~T~YtL 103 (1022)
T KOG0961|consen 28 TKLRVAIGEVPTSMVHGAFSVV----TEADSDDGLPHTLEHLVFMGSKKYPFKGVLDVIANRCLADTNAWTDTDHTAYTL 103 (1022)
T ss_pred cceEEEEeecCCcceeeeEEee----eeecCCCCCchhHHHHhhhccccCCcccHHHHhhcchhcccccccccCcceEEe
Confidence 5788887776666443333332 2233467999999999999999999999887776653 6799999999999999
Q ss_pred eccc-CCHHHHHHHHHHhhcCCCCChHHHHHH----------HHHHHHHhHhhhCChHHHHHHHHHHHhc--CCCCCCCC
Q 010710 162 DALK-TYVPEMVELLVDCVRNPVFLDWEVNEE----------LRKLKSELGELHNNPQGLLLEAIHSTGY--AGALGNPL 228 (503)
Q Consensus 162 ~~~~-~~l~~~l~ll~~~~~~p~f~~~~~~~~----------k~~~~~e~~~~~~~p~~~~~~~~~~~~~--~~~~~~~~ 228 (503)
++.- +..-++|....+.+..|..++++|-.+ +..+..|.++....-............| .++|....
T Consensus 104 Stag~dGFlklLPvy~dHiL~P~Ltdeaf~TEVyHI~geg~d~GVVySEMq~~es~~~~im~~~~~~~~yP~~sgY~~eT 183 (1022)
T KOG0961|consen 104 STAGSDGFLKLLPVYIDHILTPMLTDEAFATEVYHITGEGNDAGVVYSEMQDHESEMESIMDRKTKEVIYPPFSGYAVET 183 (1022)
T ss_pred ecccccchHHHhHHHHHhhcCcccchhhhhhheeeecCCCCccceeehhhhhhhcccchhhhhhhheeecCCCCCceecc
Confidence 9875 679999999999999999999999765 4556677777777777777778888888 77787777
Q ss_pred CCChhhhcCCCHHHHHHHHHhhcCCCCeEEEEeC-CChHHHHHHHHhhcCCCCCCCC--CCCCCCCc----------cCC
Q 010710 229 LAPESALNRLDGTILEEIVAENFTAPRMVLAASG-VDLDELLPIAEPLLSDLPRLPP--PTEPKSVY----------IGG 295 (503)
Q Consensus 229 ~~~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~l~~~~~~~l~~~~~--~~~~~~~~----------~~~ 295 (503)
.|..+.|+.++.+++++||+++|.++||.+.++| +++++++......-..++.... |...+.++ ...
T Consensus 184 GG~~knLR~lt~ekIR~yHK~~Y~~sN~cviVcG~v~~d~lL~~m~~~~neile~~s~vP~~~~rPf~~tn~~~~i~e~t 263 (1022)
T KOG0961|consen 184 GGRLKNLRELTLEKIRDYHKKFYHLSNMCVIVCGMVDHDQLLEIMNNVENEILEHMSTVPDHFPRPFSFTNALSDIKEST 263 (1022)
T ss_pred CCChhhHHHhhHHHHHHHHHHhccccceEEEEecCcCHHHHHHHHHHHHhhhhhccccCCCCCCCCcccccCcccCCccc
Confidence 8888999999999999999999999999999999 9999999987766544432211 11111010 111
Q ss_pred ceEEc---CCCCceEEEEEeeeCCCCCCCchhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhc-CCeEEEEeee
Q 010710 296 DYRQQ---ADSPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEY-QQIQSFSAFN 371 (503)
Q Consensus 296 ~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~-~~~Y~~~a~~ 371 (503)
...++ .|.-+..+.++|.++. ..+...-.++.+|-.+|....- +++-+.+-+-. .++-+++...
T Consensus 264 ~~tVefp~~Des~G~v~~aW~g~s-~sD~~t~~a~~vL~dyls~sav-----------apf~~~fVeieDP~assv~f~~ 331 (1022)
T KOG0961|consen 264 VHTVEFPTDDESRGAVEVAWFGHS-PSDLETHSALHVLFDYLSNSAV-----------APFQKDFVEIEDPLASSVSFHI 331 (1022)
T ss_pred eeeeecCCcccccceEEEEEcCCC-HHHhhhHHHHHHHHHHhccccc-----------cccccceEEecCccccceeeee
Confidence 22233 2356788889998886 2356777899999999986432 45544444422 3444443332
Q ss_pred ccccCcceEEEEEEeC-cchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHccCChHH--HHHHHHHHHHHh
Q 010710 372 SIFNNTGLFGIYACTG-SDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLESRVI--VSEDIGRQILTY 448 (503)
Q Consensus 372 ~~~~~~~~f~i~~~~~-p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 448 (503)
.+.-...+.+.++.- .+++.+.-..+++.+.+.++ |+-+.+.....+.+-+++.+++.+.. .+..+....+ +
T Consensus 332 -~~~vrc~i~L~f~gVP~EKi~~~~~k~l~~l~et~~---iDm~Rm~~~i~~t~~~yL~nlE~n~~s~fms~ii~d~~-y 406 (1022)
T KOG0961|consen 332 -AEGVRCDIRLNFAGVPVEKIDECAPKFLDKLVETAN---IDMERMGYLIDQTILNYLVNLETNAPSDFMSHIIGDQL-Y 406 (1022)
T ss_pred -ecccceeEEEeecCCcHHHhhhhhHHHHHHHHHhcc---cCHHHHHHHHHHHHHHHHHhhhcCChHHHHHHHhhhhh-c
Confidence 222233455555444 46777777777776655443 88888888888888888888886643 3333333334 3
Q ss_pred CCcC--CH------HHHHHHHccCCHHHHHHHHHHhhcCCceEEEE-ccCCCCHHHHHhH
Q 010710 449 GERK--SV------DQFLSVLEHITLDDITNIAQKIISSPLTMASY-VINVPGYESVSSK 499 (503)
Q Consensus 449 g~~~--~~------~~~~~~i~~vT~~di~~~a~~~l~~~~~~~~~-~~~~p~~~~~~~~ 499 (503)
|..+ .. -++.+.+.+-...|..+..+||+..++.+.|+ ++..-.+|.|++.
T Consensus 407 gnedg~~l~~~lk~l~~~~~L~~w~~kdW~~Llnk~Fven~s~tVia~Ps~em~e~i~kE 466 (1022)
T KOG0961|consen 407 GNEDGELLKKRLKELDFLKKLKSWPAKDWVQLLNKYFVENPSATVIAVPSEEMVEKIAKE 466 (1022)
T ss_pred cCcchhHHHHHHHhHHHHHHHhhccHHHHHHHHHHHhccCCCeEEEecCcHHHHHHHHHH
Confidence 4332 11 33567788899999999999999977777766 6665556666543
No 19
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=7.1e-17 Score=160.52 Aligned_cols=400 Identities=12% Similarity=0.096 Sum_probs=288.1
Q ss_pred eEEEEcCCCcEEEEecCCCCeEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCCHHH-HHHHHHH-cCCeeeEeec
Q 010710 76 VKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLR-IVREVEA-IGGSILASAS 153 (503)
Q Consensus 76 ~~~~~L~NG~~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s~~~-l~~~l~~-~g~~~~~~~~ 153 (503)
+....-.-|.++.+.+.+.+--.+++.++.. +++..|+.|++||-..=|+.+|+-.+ +.+.|.. ..--+|+.+.
T Consensus 54 v~lkH~~Tgae~lhl~reD~N~vFsI~FrTp----p~dstGiPHILEHtvLCGS~KYPvrdPFfkmLnrSLatFmNAfT~ 129 (998)
T KOG2019|consen 54 VLLKHKKTGAEVLHLDREDENNVFSIVFRTP----PKDSTGIPHILEHTVLCGSRKYPVRDPFFKMLNRSLATFMNAFTA 129 (998)
T ss_pred eeeeecCCCceeEeeccCCCCceeEEEeecC----CCccCCCchhhhhheeeccCcCcccChHHHHHHHHHHHHHhhccC
Confidence 4445556799999766665544455566555 45566999999999988998887544 4444433 2345789999
Q ss_pred cceEEEEEeccc-CCHHHHHHHHHHhhcCCCCChHHHHHH------------------HHHHHHHhHhhhCChHHHHHHH
Q 010710 154 REQMGYSFDALK-TYVPEMVELLVDCVRNPVFLDWEVNEE------------------LRKLKSELGELHNNPQGLLLEA 214 (503)
Q Consensus 154 ~~~~~~~~~~~~-~~l~~~l~ll~~~~~~p~f~~~~~~~~------------------k~~~~~e~~~~~~~p~~~~~~~ 214 (503)
.+++.|-+.+.+ +|...+.++..|....|..-..+|.++ +..+-.|.+-...+|...+...
T Consensus 130 pD~T~yPfattN~kDf~NL~dVYLDAtffPklr~~dF~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S~~~~if~~~ 209 (998)
T KOG2019|consen 130 PDYTFYPFATTNTKDFYNLRDVYLDATFFPKLRKLDFQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYSDPDYIFGML 209 (998)
T ss_pred CCcceeecccCChHHHHHHHHHhhhcccchHHHhhhhhhhcceeecCCCCCCcccceeeeeeeecccccccChhHHHHHH
Confidence 999999988865 689999999999999998777777654 5566677777778899999999
Q ss_pred HHHHhc-CCCCCCCCCCChhhhcCCCHHHHHHHHHhhcCCCCeEEEEeC-CChHHHHHHHHhhcCCCCCCCCCCCCC-C-
Q 010710 215 IHSTGY-AGALGNPLLAPESALNRLDGTILEEIVAENFTAPRMVLAASG-VDLDELLPIAEPLLSDLPRLPPPTEPK-S- 290 (503)
Q Consensus 215 ~~~~~~-~~~~~~~~~~~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~l~~~~~~~l~~~~~~~~~~-~- 290 (503)
+.+.+| ++.||....|.+..|..++.+++++||.++|.|+|..+...| +..+..+.+++.-|....+........ .
T Consensus 210 ~Qq~L~p~~tYgv~SGGDPl~IpdLt~eelk~FHr~~YHPSNAri~tYGn~Pl~~~l~~l~e~~~~~sk~~~s~kv~~qk 289 (998)
T KOG2019|consen 210 FQQALFPENTYGVNSGGDPLDIPDLTYEELKEFHRQHYHPSNARIFTYGNFPLEDLLKQLEEDFSPFSKRELSSKVTFQK 289 (998)
T ss_pred HHHhhCccccccccCCCCcccCccccHHHHHHHHHhccCCCcceeEeecCchHHHHHHHHHHhhcccccccccCcccccc
Confidence 999999 999999889999999999999999999999999999999999 999999998887665553332211111 1
Q ss_pred Ccc-CCceE-------EcCCCCceEEEEEeeeCCCCCCCchhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhcC
Q 010710 291 VYI-GGDYR-------QQADSPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQ 362 (503)
Q Consensus 291 ~~~-~~~~~-------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~~ 362 (503)
.+. ..... ...+..+....+.|-.++ ..+..+..++.+|++||-+|.+ |++|+.|.|- |
T Consensus 290 ~f~kp~rvve~~p~d~~~~p~Kq~~~s~s~L~~~-p~d~~etfaL~~L~~Ll~~gps-----------Sp~yk~LiES-G 356 (998)
T KOG2019|consen 290 LFDKPRRVVEKGPADPGDLPKKQTKCSNSFLSND-PLDTYETFALKVLSHLLLDGPS-----------SPFYKALIES-G 356 (998)
T ss_pred ccccCceeeeecCCCCCCCccceeEEEEEeecCC-chhHHHHHHHHHHHHHhcCCCc-----------cHHHHHHHHc-C
Confidence 111 11111 122345777778887775 3567889999999999998766 9999999976 4
Q ss_pred Ce--EEEEeeeccccCcceEEEEEEeCc-chHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHccCChH-HHH
Q 010710 363 QI--QSFSAFNSIFNNTGLFGIYACTGS-DFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLESRV-IVS 438 (503)
Q Consensus 363 ~~--Y~~~a~~~~~~~~~~f~i~~~~~p-~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~~~-~~~ 438 (503)
++ .++.+++...--.+.|++.++.-. ++++++-+.+...+.+++..| ++.+.+|...+++--++..+..... ..+
T Consensus 357 LGtEfsvnsG~~~~t~~~~fsVGLqGvseediekve~lV~~t~~~lae~g-fd~drieAil~qiEislk~qst~fGL~L~ 435 (998)
T KOG2019|consen 357 LGTEFSVNSGYEDTTLQPQFSVGLQGVSEEDIEKVEELVMNTFNKLAETG-FDNDRIEAILHQIEISLKHQSTGFGLSLM 435 (998)
T ss_pred CCcccccCCCCCcccccceeeeeeccccHHHHHHHHHHHHHHHHHHHHhc-cchHHHHHHHHHhhhhhhccccchhHHHH
Confidence 44 456666655556778888887664 567777788889999999998 9999999888877666555443321 122
Q ss_pred HHHHHHHHHhCCcCCH-------HHHHHHHccCCHHHHHHHHHHhhcCCceEEEE-ccCCCCH
Q 010710 439 EDIGRQILTYGERKSV-------DQFLSVLEHITLDDITNIAQKIISSPLTMASY-VINVPGY 493 (503)
Q Consensus 439 ~~~~~~~~~~g~~~~~-------~~~~~~i~~vT~~di~~~a~~~l~~~~~~~~~-~~~~p~~ 493 (503)
..+..-+.+..++... +.+...+..-...=++...++|+..++..+.+ +-.-|++
T Consensus 436 ~~i~~~W~~d~DPfE~Lk~~~~L~~lk~~l~ek~~~lfq~lIkkYilnn~h~~t~smqpd~e~ 498 (998)
T KOG2019|consen 436 QSIISKWINDMDPFEPLKFEEQLKKLKQRLAEKSKKLFQPLIKKYILNNPHCFTFSMQPDPEF 498 (998)
T ss_pred HHHhhhhccCCCccchhhhhhHHHHHHHHHhhhchhHHHHHHHHHHhcCCceEEEEecCCchh
Confidence 2333333444454332 22334444445667889999999988877777 4444443
No 20
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=1e-16 Score=159.45 Aligned_cols=382 Identities=16% Similarity=0.088 Sum_probs=252.9
Q ss_pred EEEEcCCCcEEEEecCC-CCeEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCCHHHHHHHHHHcCCeeeEeecc-
Q 010710 77 KVTTLENGIRIASETSV-SPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASASR- 154 (503)
Q Consensus 77 ~~~~L~NG~~v~~~~~~-~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~~~- 154 (503)
..+..-||++|...+.. +..+++++.+..++.-+. --+.+.-++..++..||+..+..++.+++..+.|+++++...
T Consensus 562 ~~v~dingvkv~~~dl~tngi~Y~r~~~~l~~~p~e-L~PylPlfc~sll~lGt~~lsf~el~qqI~rkTGGiS~~p~~~ 640 (998)
T KOG2019|consen 562 LEVGDINGVKVQRCDLFTNGITYTRVVFDLNSLPEE-LLPYLPLFCQSLLNLGTGDLSFVELEQQIGRKTGGISVSPLVS 640 (998)
T ss_pred eeeeeccCceeEEeeccCCceEEEEEeeccccCcHH-hhcchHHHHHHHHhcCCCcccHHHHHHHhhhhcCceeecceec
Confidence 34456699999987777 569999999999996665 244556667777788999999999999999998777775432
Q ss_pred ---------ceEEEEEecccCCHHHHHHHHHHhhcCCCCCh-HHHHHHHHHHHHHhHhhhCChHHHHHHHHHHHhcCCCC
Q 010710 155 ---------EQMGYSFDALKTYVPEMVELLVDCVRNPVFLD-WEVNEELRKLKSELGELHNNPQGLLLEAIHSTGYAGAL 224 (503)
Q Consensus 155 ---------~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~-~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~~~~~ 224 (503)
..+.++..++..+.+.+++++...+.++.|.+ +.|+.......+++.+.-.+.- ..+....+.+--.+-
T Consensus 641 s~~~~d~p~~~i~~~~~~l~rn~~dlfel~n~il~e~~f~n~dkfkvlvk~s~s~~~n~i~dsG-H~~A~~rs~a~l~~a 719 (998)
T KOG2019|consen 641 SDDGMDEPELGIVFSGSMLDRNADDLFELWNKILQETCFTNQDKFKVLVKQSASRMTNGIADSG-HGFAAARSAAMLTPA 719 (998)
T ss_pred cCCCCCccceeEEechhhhcCChhHHHHHHHHHhcccCcccHHHHHHHHHHHHHHhhccCCccc-chhHhhhhhcccCcc
Confidence 24778888889999999999999999999975 4566666665555554332211 112222222110111
Q ss_pred CC--CCCCChhhhc------CCC-------HHHHHHHHHhhcCCCCeEEEEeC--CChHHHHHHHHhhcCCCCCC-CCCC
Q 010710 225 GN--PLLAPESALN------RLD-------GTILEEIVAENFTAPRMVLAASG--VDLDELLPIAEPLLSDLPRL-PPPT 286 (503)
Q Consensus 225 ~~--~~~~~~~~l~------~l~-------~~~l~~f~~~~~~~~~~~l~i~G--~~~~~l~~l~~~~~~~l~~~-~~~~ 286 (503)
|. ..++-.++++ ... .+.|.++.+-+...++|.+.|.. ..+..+++.+++++..+|.. +...
T Consensus 720 g~i~EqlgGl~ql~fl~~L~~~~d~d~~~i~~kL~eIrk~ll~~ng~~~~itAd~~q~~~vEkav~kFl~~lp~e~p~g~ 799 (998)
T KOG2019|consen 720 GWISEQLGGLSQLEFLHRLEEKVDNDWEPIVSKLTEIRKSLLNTNGMIVNITADPKQLTNVEKAVEKFLDSLPRENPSGS 799 (998)
T ss_pred cchHhHhcchHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEecCcccchhHHHHHHHHHHhccccCCCCC
Confidence 11 1111111111 111 24566666666688999999988 89999999999999888842 2211
Q ss_pred C--CCCCcc--CCceEEcCC-CCceEEEEEeeeCCCCCCCchhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhc
Q 010710 287 E--PKSVYI--GGDYRQQAD-SPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEY 361 (503)
Q Consensus 287 ~--~~~~~~--~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~ 361 (503)
. +.+..+ ....++..+ -+..++.-+..+-+ +++++-+.+.|++.+|.. ..||.+||++.
T Consensus 800 ~st~d~r~p~~~~~i~~~~P~fqvnyvgka~~~vp--yt~~d~asl~vlS~~lt~--------------k~Lh~evRekG 863 (998)
T KOG2019|consen 800 KSTWDARLPLRSEAIRVVIPTFQVNYVGKAGLGVP--YTHPDGASLQVLSKLLTN--------------KWLHDEVREKG 863 (998)
T ss_pred ccCccccCCCCceeEEEeccccchhhhhhhccccc--CCCCCCcHHHHHHHHHHH--------------HHHHHHHHHhc
Confidence 1 122211 122233333 22333333333333 788999999999999985 89999999985
Q ss_pred CCeEEEEeeeccccCcceEEEEEEeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHccCChHHHHHHH
Q 010710 362 QQIQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLESRVIVSEDI 441 (503)
Q Consensus 362 ~~~Y~~~a~~~~~~~~~~f~i~~~~~p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~~~~~~~~~ 441 (503)
| +|+.++.+... .|.|+++...+|+ ..+.++.+-..-+-++.. .+++++|++||...+++..... .+.... +
T Consensus 864 G-AYGgg~s~~sh--~GvfSf~SYRDpn-~lktL~~f~~tgd~~~~~-~~~~~dldeAkl~~f~~VDap~-~P~~kG--~ 935 (998)
T KOG2019|consen 864 G-AYGGGCSYSSH--SGVFSFYSYRDPN-PLKTLDIFDGTGDFLRGL-DVDQQDLDEAKLGTFGDVDAPQ-LPDAKG--L 935 (998)
T ss_pred C-ccCCccccccc--cceEEEEeccCCc-hhhHHHhhcchhhhhhcC-CccccchhhhhhhhcccccCCc-CCcccc--h
Confidence 5 89888876554 6777777777776 445555555554444443 5999999999999998865433 333222 3
Q ss_pred HHHHHHhCCcC-CHHHHHHHHccCCHHHHHHHHHHhhcCCceEEEE
Q 010710 442 GRQILTYGERK-SVDQFLSVLEHITLDDITNIAQKIISSPLTMASY 486 (503)
Q Consensus 442 ~~~~~~~g~~~-~~~~~~~~i~~vT~~di~~~a~~~l~~~~~~~~~ 486 (503)
.+. + .|..+ ..+...+.|-.++..|++++|++|+......+++
T Consensus 936 ~~f-l-~gvtDemkQarREqll~vSl~d~~~vae~yl~~~~~~~~v 979 (998)
T KOG2019|consen 936 LRF-L-LGVTDEMKQARREQLLAVSLKDFKAVAEAYLGVGDKGVAV 979 (998)
T ss_pred HHH-H-hcCCHHHHHHHHHHHHhhhHHHHHHHHHHHhccCCcceEE
Confidence 333 3 45544 4677788899999999999999999754443333
No 21
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=9.1e-11 Score=117.49 Aligned_cols=391 Identities=14% Similarity=0.107 Sum_probs=241.7
Q ss_pred EecCCCCeEEEEEEEeccccCCCCCCCcHHHHHHHHHc------ccCCCC----CHHHHHHHHHHcCCeeeEe-----ec
Q 010710 89 SETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAF------KSTKNR----SHLRIVREVEAIGGSILAS-----AS 153 (503)
Q Consensus 89 ~~~~~~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~------~gt~~~----s~~~l~~~l~~~g~~~~~~-----~~ 153 (503)
+..-++..+.+..+++.....-+ ......++..+++ .|+-+- +..++.+.+....+..+.. +-
T Consensus 555 l~h~ps~Fvel~fl~dss~i~~s--l~pYl~~f~~l~~~~pa~ldgtiptp~~~s~~~v~~~~~s~~id~si~~g~~G~~ 632 (1022)
T KOG0961|consen 555 LHHCPSKFVELFFLLDSSNISIS--LRPYLFLFTDLLFESPAMLDGTIPTPVLTSADDVAKHFTSDLIDHSIQVGVSGLY 632 (1022)
T ss_pred cccCchHHHhHhhhhccccCchh--hhhHHHHHHHHHhcCHHHhcCCCCcchhhhHHHHHHHHHhhhhhhhhcccccccc
Confidence 34444455666666666555432 2333344444443 354443 3445555444433222222 23
Q ss_pred cceEEEEEecccCCHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHhHhhhCChHHHHHHHHHHHhc-CCCCCCCC--CC
Q 010710 154 REQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGY-AGALGNPL--LA 230 (503)
Q Consensus 154 ~~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~--~~ 230 (503)
++-+.+.+++..++.+..++++-.++....||+.++....+++..++...+.|....+.......+| .+.+.... +-
T Consensus 633 ~~lvn~~Ikv~a~~Y~~~v~Wi~~~l~~~VfD~~Ri~~~~~~~l~~i~~~KRdg~~vlss~~~~~lY~~~slk~s~d~L~ 712 (1022)
T KOG0961|consen 633 DRLVNLRIKVGADKYPLLVKWIQIFLQGVVFDPSRIHQCAQKLLGEIRDRKRDGCTVLSSAVASMLYGKNSLKISFDELV 712 (1022)
T ss_pred hhheeEEEEEccCCcchhHHHHHHHhhhhccCHHHHHHHHHHHHhhhhhhhcCccEehHHHHHHHHhcccchhhcccHHH
Confidence 4568999999999999999999999999999999999999999999998888888888888888888 55443321 11
Q ss_pred ChhhhcCCC----------HHHHHHHHHhhcCCCCeEEEEeC-CCh-HHHHHHHHhhcCCCCCCCCCCC----------C
Q 010710 231 PESALNRLD----------GTILEEIVAENFTAPRMVLAASG-VDL-DELLPIAEPLLSDLPRLPPPTE----------P 288 (503)
Q Consensus 231 ~~~~l~~l~----------~~~l~~f~~~~~~~~~~~l~i~G-~~~-~~l~~l~~~~~~~l~~~~~~~~----------~ 288 (503)
.++-++.|. .+.++...+-....+.+.+.++| ++. +....-...+..+..-. .|.. .
T Consensus 713 ~Ek~l~ei~~~v~n~~~~Il~~~e~mR~y~l~~n~~~ihvvgDI~kid~~~~~Wn~l~~~~~~~-nP~~~f~~tf~~~~~ 791 (1022)
T KOG0961|consen 713 LEKLLEEISKDVMNNPEAILEKLEQMRSYALFSNGVNIHVVGDIDKIDPKMLSWNWLQADPRFG-NPGHQFSATFEAGEN 791 (1022)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhcceEEEEEeehhcCCccccCchhhhcCcccC-CchhhcccccccCcc
Confidence 112222221 12233333322355788999999 642 22211122222221111 0100 1
Q ss_pred CCCccC---CceEEcCC-CCceEEEEEeeeCCCCCCCchhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhcCCe
Q 010710 289 KSVYIG---GDYRQQAD-SPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQI 364 (503)
Q Consensus 289 ~~~~~~---~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~~~~ 364 (503)
.+.-.| +...+..+ .+.+.+...-+.... +.+++.+...+++++|+- |..++|+.||.. |++
T Consensus 792 ~s~e~gsssk~~~I~~p~sESs~l~~sip~~~~-w~dpel~~~~l~~~YL~~------------~eGPfW~~IRG~-GLA 857 (1022)
T KOG0961|consen 792 VSLELGSSSKELLIGVPGSESSFLYQSIPLDAN-WNDPELIPAMLFGQYLSQ------------CEGPFWRAIRGD-GLA 857 (1022)
T ss_pred cceeccCCcceeEecCCCccccceeeecccccc-cCCcchhHHHHHHHHHHh------------cccchhhhhccc-chh
Confidence 111112 12233333 455544444444433 367899999999999985 668999999976 899
Q ss_pred EEEEeeeccccCcceEEEEEEeCcchHHHHHHHHHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHccCChHHHH--HHH
Q 010710 365 QSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIAT-PKQVTQVQLNRAKEATKSAVLMNLESRVIVS--EDI 441 (503)
Q Consensus 365 Y~~~a~~~~~~~~~~f~i~~~~~p~~~~~~~~~~~~~l~~~~~-~g~i~~~el~~ak~~~~~~~~~~~~~~~~~~--~~~ 441 (503)
|++..+..+..+...|.||...+|.++ .+.-.+.++.+.. .|++++.+|+-||...+..+......-.+-+ ..+
T Consensus 858 YGanm~~~~d~~~~~~~iyr~ad~~ka---ye~~rdiV~~~vsG~~e~s~~~~egAk~s~~~~~~~~Eng~~~~a~~~~~ 934 (1022)
T KOG0961|consen 858 YGANMFVKPDRKQITLSIYRCADPAKA---YERTRDIVRKIVSGSGEISKAEFEGAKRSTVFEMMKRENGTVSGAAKISI 934 (1022)
T ss_pred ccceeEEeccCCEEEEEeecCCcHHHH---HHHHHHHHHHHhcCceeecHHHhccchHHHHHHHHHHhccceechHHHHH
Confidence 999888766655566667766666544 4555555566665 4579999999999999887654432221111 122
Q ss_pred HHHHHHhCCcC-CHHHHHHHHccCCHHHHHHHHHHhhc----CCceEEEEccCCCCHHHHHhHhh
Q 010710 442 GRQILTYGERK-SVDQFLSVLEHITLDDITNIAQKIIS----SPLTMASYVINVPGYESVSSKFH 501 (503)
Q Consensus 442 ~~~~~~~g~~~-~~~~~~~~i~~vT~~di~~~a~~~l~----~~~~~~~~~~~~p~~~~~~~~~~ 501 (503)
...+ .+.+. ...+++++|.+||.+|+.+..+.|+. ++..++++.......+++++.|.
T Consensus 935 l~~~--~q~~~~fn~~~leri~nvT~~~~~~~~~~y~~~~Fds~~~va~i~~hpaKle~~~e~F~ 997 (1022)
T KOG0961|consen 935 LNNF--RQTPHPFNIDLLERIWNVTSEEMVKIGGPYLARLFDSKCFVASIAVHPAKLEEMKEAFP 997 (1022)
T ss_pred HHHH--HhcCCcccHHHHHHHHHhhHHHHHHhcccceehhhcccCceEEEeccHHHHHHHHHHhh
Confidence 2222 23333 34789999999999999999998874 66777777666677788887774
No 22
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=98.58 E-value=1.1e-06 Score=82.62 Aligned_cols=132 Identities=24% Similarity=0.268 Sum_probs=89.6
Q ss_pred CCCCCCCCceEEEEcCCCcEEEEecCC-CCeEEEEEEEeccccCCCCCCCcHHHHHHHHHcc-cCCCCCHHHHHHHHHHc
Q 010710 67 LPDFVEPGKVKVTTLENGIRIASETSV-SPAASIGLYLDFGSVYETPSSCGASNLLEKMAFK-STKNRSHLRIVREVEAI 144 (503)
Q Consensus 67 ~~~~~~~~~~~~~~L~NG~~v~~~~~~-~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~-gt~~~s~~~l~~~l~~~ 144 (503)
++..++..+++... .+|++|+..+.+ +..+++.++++.+..... ..-...|+..++.. ||+++++.++...+..+
T Consensus 62 i~~~~~~~~~~~~~-~~~~~v~~~~~~TnGI~Y~~l~fdl~~l~~e--~l~yl~Ll~~ll~~lgT~~~sy~el~~~i~~~ 138 (248)
T PF08367_consen 62 IPREIEKIPLEVEK-LGGIPVLFHEQPTNGIVYVRLYFDLSDLPEE--DLPYLPLLTDLLGELGTKNYSYEELSNEIDLY 138 (248)
T ss_dssp S-SS------EECC-CTTCEEEEEE---TTEEEEEEEEE-TTS-CC--CHCCHHHHHHHCCCS-BSSS-HHHHHHHHHHH
T ss_pred cCCCCCCCCceeee-cCCccEEEEEcCCCCeEEEEEEecCCCCCHH--HHHhHHHHHHHHHhCCCCCCCHHHHHHHHHHh
Confidence 34444443444443 378999965555 679999999999965544 55667788888866 99999999999999999
Q ss_pred CCeeeEeecc-----------ceEEEEEecccCCHHHHHHHHHHhhcCCCCChH-HHHHHHHHHHHHhH
Q 010710 145 GGSILASASR-----------EQMGYSFDALKTYVPEMVELLVDCVRNPVFLDW-EVNEELRKLKSELG 201 (503)
Q Consensus 145 g~~~~~~~~~-----------~~~~~~~~~~~~~l~~~l~ll~~~~~~p~f~~~-~~~~~k~~~~~e~~ 201 (503)
.|++++++.. ..+.++++++.++++++++++.+++.+++|++. .+.....+.+..+.
T Consensus 139 tGGis~~~~~~~~~~~~~~~~~~l~is~k~L~~~~~~~~~ll~eil~~~~f~d~~rl~~ll~~~~s~~~ 207 (248)
T PF08367_consen 139 TGGISFSIEVYTDYDDDDKYRPYLVISAKCLDEKLDEAFELLSEILTETDFDDKERLKELLKELKSDME 207 (248)
T ss_dssp SSEEEEEEEEEEEECTECCCEEEEEEEEEEEGGGHHHHHHHHHHHHHCB-TT-HHHHHHHHHHHHHHHH
T ss_pred CCCeEEEeeeccCCCCccceeEEEEEEEEeHhhhHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHH
Confidence 8887776532 358899999999999999999999999999875 34444444444443
No 23
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=97.92 E-value=0.00043 Score=67.88 Aligned_cols=185 Identities=19% Similarity=0.288 Sum_probs=113.3
Q ss_pred EEcCCCcEEEEecCCCCeEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCCHHHHHHHHHHcCCeeeEeeccceEE
Q 010710 79 TTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMG 158 (503)
Q Consensus 79 ~~L~NG~~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~~~~~~~ 158 (503)
..|+||+||...+.-...+++++. +.|.-.+-++-.|+|||+||.+.+ +++.. ...|++|+|.+++
T Consensus 2 IvL~NGVRiFin~~M~KDIYlGIs-~FGFe~DI~~iLGiAHLLEHILIs----FD~~~---------F~ANASTaRsYMS 67 (590)
T PF03410_consen 2 IVLSNGVRIFINPSMKKDIYLGIS-NFGFENDIGEILGIAHLLEHILIS----FDSSK---------FLANASTARSYMS 67 (590)
T ss_pred eEecCceEEEecCccccceEEeec-ccccccchHHHHhHHHHHHHHeee----cchHH---------hhcccchhhhhhh
Confidence 579999999998888778888864 566666656788999999999942 22221 2347899999999
Q ss_pred EEEecccCC-HHHHHHHHHHhhcCC-----CCChHHHHHHHHHHHHHhHhhhCChHHHHHHHHHHHhcCCCCCCCCCCCh
Q 010710 159 YSFDALKTY-VPEMVELLVDCVRNP-----VFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGYAGALGNPLLAPE 232 (503)
Q Consensus 159 ~~~~~~~~~-l~~~l~ll~~~~~~p-----~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (503)
|-+.+.+.. -.+++..+...+..- .|+...++.....+..|+-- .|-.-...+.+.-+. ++.+-+ .|..
T Consensus 68 FWC~si~g~~~~DAvrtliSWFF~~g~Lk~~F~~~~i~~hikELENEYYF--RnEvfHCmDvLtfL~-gGDLYN--GGRi 142 (590)
T PF03410_consen 68 FWCKSIRGRTYIDAVRTLISWFFDNGKLKDNFSRSKIKNHIKELENEYYF--RNEVFHCMDVLTFLG-GGDLYN--GGRI 142 (590)
T ss_pred hhhhhccCCChhHHHHHHHHHhhcCCcccccccHhHHHHHHHHHhhhhhh--hhhHHHHHHHHHHhc-CCcccC--CchH
Confidence 988887754 345555555555442 35555554444444443331 222233344433322 333322 3455
Q ss_pred hhhcCCCHHHHHHHHHhhc---CCCCeEEEEeCCChHHHHHHHHhhcCCCCCCCCC
Q 010710 233 SALNRLDGTILEEIVAENF---TAPRMVLAASGVDLDELLPIAEPLLSDLPRLPPP 285 (503)
Q Consensus 233 ~~l~~l~~~~l~~f~~~~~---~~~~~~l~i~G~~~~~l~~l~~~~~~~l~~~~~~ 285 (503)
..+++++ ++.+...... ...++++.+--.++ .+..++++.||.+|..+..
T Consensus 143 ~ML~~l~--~i~~mL~~RM~~I~GpniVIFVk~l~~-~~l~lL~~TFGtLP~cP~~ 195 (590)
T PF03410_consen 143 DMLNNLN--DIRNMLSNRMHRIIGPNIVIFVKELNP-NILSLLSNTFGTLPSCPLT 195 (590)
T ss_pred HHHhhhH--HHHHHHHHHHHhhcCCcEEEEEeccCH-HHHHHHHHhcCCCCCCccc
Confidence 6665553 3433333322 44555555444775 5779999999999987643
No 24
>PHA03081 putative metalloprotease; Provisional
Probab=97.78 E-value=0.0007 Score=66.49 Aligned_cols=186 Identities=19% Similarity=0.253 Sum_probs=114.6
Q ss_pred EEcCCCcEEEEecCCCCeEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCCHHHHHHHHHHcCCeeeEeeccceEE
Q 010710 79 TTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMG 158 (503)
Q Consensus 79 ~~L~NG~~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s~~~l~~~l~~~g~~~~~~~~~~~~~ 158 (503)
.+|+||+||...+.-...+++++. +.|.-.+-.+-.|++||+||.+.. ++... ...|+++.+.+++
T Consensus 2 i~~~ngvr~f~~~~m~kdiy~gi~-~fgfe~di~~~lg~ahllehili~----fd~~~---------f~anast~r~yms 67 (595)
T PHA03081 2 IVLSNGVRIFINPSMKKDIYLGIS-NFGFENDIGEILGIAHLLEHILIS----FDSSK---------FVANASTARSYMS 67 (595)
T ss_pred eEecCceEEEecCccccceEEeec-ccccccchHHHHhHHHHHHHHeee----cchHH---------hcccchhhhhhHh
Confidence 579999999988887777888764 566655556788999999999942 22221 2347888999999
Q ss_pred EEEecccCC-HHHHHHHHHHhhcCCCCChHHHHHHH-HHHHHHhHhh--hCChHHHHHHHHHHHhcCCCCCCCCCCChhh
Q 010710 159 YSFDALKTY-VPEMVELLVDCVRNPVFLDWEVNEEL-RKLKSELGEL--HNNPQGLLLEAIHSTGYAGALGNPLLAPESA 234 (503)
Q Consensus 159 ~~~~~~~~~-l~~~l~ll~~~~~~p~f~~~~~~~~k-~~~~~e~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (503)
|-..+.... ..+++..+...+..+.--.+.|...+ +....|+++. ..|-.-...+.+.-+. ++.+-+ .|....
T Consensus 68 fwc~sirg~~y~DAvrtliSWFF~~~~Lr~~F~~~~ik~~ikELENEYYFRnEvfHCmDvLTfL~-gGDLYN--GGRi~M 144 (595)
T PHA03081 68 FWCKSIRGRSYIDAIRTLISWFFDNGKLKDNFSLSKIRNHIKELENEYYFRNEVFHCMDVLTFLG-GGDLYN--GGRIDM 144 (595)
T ss_pred HhhHhhcCCchHHHHHHHHHHhccCCccccccchhhHHHHHHHHhhhhhhhhhhHHHHHHHHHhc-CCcccC--CchHHH
Confidence 988877653 36778888888877664444443322 1222333321 1222233444443332 333332 345566
Q ss_pred hcCCCHHHHHHHHHhhc---CCCCeEEEEeCCChHHHHHHHHhhcCCCCCCCC
Q 010710 235 LNRLDGTILEEIVAENF---TAPRMVLAASGVDLDELLPIAEPLLSDLPRLPP 284 (503)
Q Consensus 235 l~~l~~~~l~~f~~~~~---~~~~~~l~i~G~~~~~l~~l~~~~~~~l~~~~~ 284 (503)
|+++ +++.+.....+ ...++++.+--.++ .+..++++.||.+|..+.
T Consensus 145 L~~l--~~i~~~L~~RM~~I~GpniVIFVk~ln~-~~l~lL~~TFGtLP~~P~ 194 (595)
T PHA03081 145 LDNL--NDVRDMLSNRMHRISGPNIVIFVKELNP-NTLSLLNNTFGTLPSCPE 194 (595)
T ss_pred Hhhh--HHHHHHHHHHHHhhcCCcEEEEEeccCH-HHHHHHHHhcCCCCCCcc
Confidence 6655 34444443333 34555555444775 577999999999998764
No 25
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=97.49 E-value=0.011 Score=63.41 Aligned_cols=169 Identities=8% Similarity=-0.028 Sum_probs=108.9
Q ss_pred CCceEEEEEeeeCCCCCCC--chhHHHHHHHHhcCCCCCCCCCCCCCCcccH-HHHHHHhhcCCeEEEEeeeccccCcce
Q 010710 303 SPETHIALAFEVPGGWLKD--KEAIILTVLQVLMGGGGSFSAGGPGKGMHTR-LYLRVLNEYQQIQSFSAFNSIFNNTGL 379 (503)
Q Consensus 303 ~~~~~v~~~~~~~~~~~~~--~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~-L~~~lR~~~~~~Y~~~a~~~~~~~~~~ 379 (503)
.+.+.+.+.+.... .++ .......++.++|..|+. .+... =+.+..++.|..+++++. .-.
T Consensus 19 ~p~vav~l~v~aGS--~~Ep~~~~GLAHfLEHMLFkGT~--------~~~~~~~i~~~le~lGG~lNA~Ts------~d~ 82 (696)
T TIGR02110 19 AKRAAALLRVAAGS--HDEPSAWPGLAHFLEHLLFLGGE--------RFQGDDRLMPWVQRQGGQVNATTL------ERT 82 (696)
T ss_pred CCEEEEEEEEeecc--CCCCCCCCcHHHHHHHHHhcCCC--------CCCcHHHHHHHHHHhCCeEEEEEc------CCe
Confidence 56677778887765 332 345677788888876532 12221 234555566654433332 223
Q ss_pred EEEEEEeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHhCCcC--CHHHH
Q 010710 380 FGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLESRVIVSEDIGRQILTYGERK--SVDQF 457 (503)
Q Consensus 380 f~i~~~~~p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~ 457 (503)
..+++.+.+++.+++++.+.+.+.+ ..++++++++-|..++.++....+++...........++.+.+. +..--
T Consensus 83 T~y~~~v~~~~l~~aL~lLaD~l~~----P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iGt 158 (696)
T TIGR02110 83 TAFFFELPAAALAAGLARLCDMLAR----PLLTAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAGS 158 (696)
T ss_pred EEEEEEecHHHHHHHHHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCCC
Confidence 4567778888888777766555443 35999999999999999999988888877766555544333221 11112
Q ss_pred HHHHcc---CCHHHHHHHHHHhhcCCceEEEEccCCC
Q 010710 458 LSVLEH---ITLDDITNIAQKIISSPLTMASYVINVP 491 (503)
Q Consensus 458 ~~~i~~---vT~~di~~~a~~~l~~~~~~~~~~~~~p 491 (503)
.+.|++ +|.+||++|.+++..+++++++++.+++
T Consensus 159 ~esL~~it~~t~edL~~F~~~~Y~p~NmvLvIvGdvs 195 (696)
T TIGR02110 159 RDSLALPNTAFQQALRDFHRRHYQAGNMQLWLQGPQS 195 (696)
T ss_pred HHHHhCcccchHHHHHHHHHHhcchhcEEEEEEeCCC
Confidence 334444 5599999999999988777777755553
No 26
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=97.46 E-value=0.0022 Score=66.00 Aligned_cols=172 Identities=17% Similarity=0.129 Sum_probs=113.9
Q ss_pred CCceEEEEEeeeCCCCCCCchhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEeeeccccCcceEEE
Q 010710 303 SPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGI 382 (503)
Q Consensus 303 ~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~~~~Y~~~a~~~~~~~~~~f~i 382 (503)
.+...+.+.+.....+..........+|.+++..|.. +.+. .-+.+.+- +.|.. ..++.+. +... .
T Consensus 36 ~~~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~---~~~~----~~i~~~~~-~~G~~--~na~ts~--d~t~--y 101 (438)
T COG0612 36 APTVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTT---GLPS----AELAEAFE-KLGGQ--LNAFTSF--DYTV--Y 101 (438)
T ss_pred CCEEEEEEEEeecccCCCCCcccHHHHHHHHHccCCC---CCCh----HHHHHHHH-HhcCe--eeccccc--hhhh--h
Confidence 4556666777655434455667788899999875421 0000 13444443 44433 2333221 1112 2
Q ss_pred EEEeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHhCCcC--CHHHHHHH
Q 010710 383 YACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLESRVIVSEDIGRQILTYGERK--SVDQFLSV 460 (503)
Q Consensus 383 ~~~~~p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~ 460 (503)
++.+.+++.+++++.+.+.+.+- .+++++|++-|..++..+.+..+++...+..........+.+. +..-..+.
T Consensus 102 ~~~~l~~~~~~~l~llad~l~~p----~f~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~~~G~~e~ 177 (438)
T COG0612 102 YLSVLPDNLDKALDLLADILLNP----TFDEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPILGTEES 177 (438)
T ss_pred hhhhchhhhHHHHHHHHHHHhCC----CCCHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhccCCCCCCCCCCHHH
Confidence 33357788888888777666553 5999999999999999999999999988887777766454442 22334688
Q ss_pred HccCCHHHHHHHHHHhhcCCceEEEEccCCCC
Q 010710 461 LEHITLDDITNIAQKIISSPLTMASYVINVPG 492 (503)
Q Consensus 461 i~~vT~~di~~~a~~~l~~~~~~~~~~~~~p~ 492 (503)
|+++|++|++++.++|..++..+++++.++..
T Consensus 178 I~~it~~dl~~f~~k~Y~p~n~~l~vvGdi~~ 209 (438)
T COG0612 178 IEAITREDLKDFYQKWYQPDNMVLVVVGDVDA 209 (438)
T ss_pred HHhCCHHHHHHHHHHhcCcCceEEEEecCCCH
Confidence 99999999999999999988766666555443
No 27
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=96.21 E-value=0.41 Score=40.91 Aligned_cols=130 Identities=15% Similarity=0.086 Sum_probs=87.1
Q ss_pred CCCceEEEEEeeeCCCCCCC--chhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEeeeccccCcce
Q 010710 302 DSPETHIALAFEVPGGWLKD--KEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIFNNTGL 379 (503)
Q Consensus 302 ~~~~~~v~~~~~~~~~~~~~--~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~~~~Y~~~a~~~~~~~~~~ 379 (503)
+.+.+.+.+.|.++. ..+ .......++.+++..++. ++.+.=..+..++.|..+.+.+. .-.
T Consensus 9 ~~~~~~~~l~~~~Gs--~~e~~~~~G~a~ll~~l~~~gs~--------~~~~~~l~~~l~~~G~~~~~~t~------~d~ 72 (149)
T PF00675_consen 9 GSPVVSVSLVFKAGS--RYEPPGKPGLAHLLEHLLFRGSK--------KYSSDELQEELESLGASFNASTS------RDS 72 (149)
T ss_dssp TSSEEEEEEEES-SG--GGSCTTTTTHHHHHHHHTTSBBS--------SSBHHHHHHHHHHTTCEEEEEEE------SSE
T ss_pred CCCEEEEEEEEeecc--CCCCCCCCchhhhhhhhcccccc--------hhhhhhhHHHhhhhccccceEec------ccc
Confidence 467778888887775 333 234777888888876532 23343334555566766644433 334
Q ss_pred EEEEEEeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHhCCc
Q 010710 380 FGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLESRVIVSEDIGRQILTYGER 451 (503)
Q Consensus 380 f~i~~~~~p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 451 (503)
..+++.+.+++..++++.+.+.+..- .+++++|++.|..+...+....+++...+........+.+.+
T Consensus 73 t~~~~~~~~~~~~~~l~~l~~~~~~P----~f~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~~p 140 (149)
T PF00675_consen 73 TSYSASVLSEDLEKALELLADMLFNP----SFDEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFRGHP 140 (149)
T ss_dssp EEEEEEEEGGGHHHHHHHHHHHHHSB----GGCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSG
T ss_pred eEEEEEEecccchhHHHHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhccCC
Confidence 66778888888888888777666543 499999999999999999988877766666666555545443
No 28
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=96.12 E-value=0.14 Score=49.84 Aligned_cols=177 Identities=12% Similarity=0.085 Sum_probs=115.6
Q ss_pred CcEEEEecCCCCeEEEEEEEeccccCCCCCCCcHHHHHHHHHc-----ccCCCCCHHHHHHHHHHcC-Ce--eeE---ee
Q 010710 84 GIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAF-----KSTKNRSHLRIVREVEAIG-GS--ILA---SA 152 (503)
Q Consensus 84 G~~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~-----~gt~~~s~~~l~~~l~~~g-~~--~~~---~~ 152 (503)
|-.|-..+++.|.+.+.+.+.+-+-..+ ++-.+.+...++. .|++......|.+.+.... ++ .++ |.
T Consensus 258 gsEvR~rdd~lP~a~~AiAVEG~~w~~p--D~~~l~van~iiG~wdr~~g~g~~~~s~La~~~~~~~l~~sfqsFnt~Yk 335 (467)
T KOG0960|consen 258 GSEVRVRDDDLPLAHIAIAVEGVSWAHP--DYFALMVANTIIGNWDRTEGGGRNLSSRLAQKIQQDQLCHSFQSFNTSYK 335 (467)
T ss_pred CceeeecCCCCchhheeeeEecCCcCCc--cHHHHHHHHHHhhhhhcccCCccCCccHHHHHHHHHHHHHHHhhhhcccc
Confidence 7777888899999999999999887766 3333444444442 2555555555655544321 11 112 22
Q ss_pred ccceEEEEEec-ccCCHHHHHHHHHHhhcC--CCCChHHHHHHHHHHHHHhHhhhCChHHHHHHHHHHHhc-CCCCCCCC
Q 010710 153 SREQMGYSFDA-LKTYVPEMVELLVDCVRN--PVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGY-AGALGNPL 228 (503)
Q Consensus 153 ~~~~~~~~~~~-~~~~l~~~l~ll~~~~~~--p~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~ 228 (503)
+..-.++.+-+ ....++.++..+..-... ...++.++++.|.+++..+-.........+.+.-++.+. +.. .|+
T Consensus 336 DTGLwG~y~V~~~~~~iddl~~~vl~eW~rL~~~vteaEV~RAKn~Lkt~Lll~ldgttpi~ediGrqlL~~Grr--i~l 413 (467)
T KOG0960|consen 336 DTGLWGIYFVTDNLTMIDDLIHSVLKEWMRLATSVTEAEVERAKNQLKTNLLLSLDGTTPIAEDIGRQLLTYGRR--IPL 413 (467)
T ss_pred cccceeEEEEecChhhHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHhhcCCc--CCh
Confidence 33334444545 455666666554332222 268999999999999998886554444456777777775 321 233
Q ss_pred CCChhhhcCCCHHHHHHHHHhhcCCCCeEEEEeC-CC
Q 010710 229 LAPESALNRLDGTILEEIVAENFTAPRMVLAASG-VD 264 (503)
Q Consensus 229 ~~~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-~~ 264 (503)
-.....|+.++.++++++..+++-...+.++.+| +.
T Consensus 414 ~El~~rId~vt~~~Vr~va~k~iyd~~iAia~vG~ie 450 (467)
T KOG0960|consen 414 AELEARIDAVTAKDVREVASKYIYDKDIAIAAVGPIE 450 (467)
T ss_pred HHHHHHHhhccHHHHHHHHHHHhhcCCcceeeecccc
Confidence 2345789999999999999999988899999999 53
No 29
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=95.62 E-value=0.21 Score=48.63 Aligned_cols=162 Identities=15% Similarity=0.019 Sum_probs=107.5
Q ss_pred eEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCC--------HHHHH-------HHHHHcCCeeeEeeccceEEEE
Q 010710 96 AASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRS--------HLRIV-------REVEAIGGSILASASREQMGYS 160 (503)
Q Consensus 96 ~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s--------~~~l~-------~~l~~~g~~~~~~~~~~~~~~~ 160 (503)
..++.+-+.+.+..++ +.....++.-|+. |-+.+| +..+. .+++...+.-+.+.+..-+++.
T Consensus 264 ltHv~lg~Eg~~~~de--D~v~~avLq~lmG-GGGSFSAGGPGKGMySrLY~~vLNry~wv~sctAfnhsy~DtGlfgi~ 340 (472)
T KOG2067|consen 264 LTHVVLGFEGCSWNDE--DFVALAVLQMLMG-GGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSCTAFNHSYSDTGLFGIY 340 (472)
T ss_pred eeeeeEeeccCCCCCh--hHHHHHHHHHHhc-CCcccCCCCCCcchHHHHHHHHHhhhHHHHHhhhhhccccCCceeEEe
Confidence 5566677777766665 4444444444442 222222 22221 2344444455666777789999
Q ss_pred EecccCCHHHHHHHHHHhhcCC--CCChHHHHHHHHHHHHHhHhhhCChHHHHHHHHHHHhcCCCCCCCCCCChhhhcCC
Q 010710 161 FDALKTYVPEMVELLVDCVRNP--VFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGYAGALGNPLLAPESALNRL 238 (503)
Q Consensus 161 ~~~~~~~l~~~l~ll~~~~~~p--~f~~~~~~~~k~~~~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 238 (503)
+++.++...++++++..-+.+- ..+++++++.|.++++.+-.+..+-.-.+.+.-++++-.+ ...++..-.+.|+++
T Consensus 341 ~s~~P~~a~~aveli~~e~~~~~~~v~~~el~RAK~qlkS~LlMNLESR~V~~EDvGRQVL~~g-~rk~p~e~~~~Ie~l 419 (472)
T KOG2067|consen 341 ASAPPQAANDAVELIAKEMINMAGGVTQEELERAKTQLKSMLLMNLESRPVAFEDVGRQVLTTG-ERKPPDEFIKKIEQL 419 (472)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccccchhHHHHhHHHHhcc-CcCCHHHHHHHHHhc
Confidence 9999999999999998777663 3789999999999999988655544445666666666422 222222334788999
Q ss_pred CHHHHHHHHHhhcCCCCeEEEEeC
Q 010710 239 DGTILEEIVAENFTAPRMVLAASG 262 (503)
Q Consensus 239 ~~~~l~~f~~~~~~~~~~~l~i~G 262 (503)
+++|+.++-.+.++ .+.++...|
T Consensus 420 t~~DI~rva~kvlt-~~p~va~~G 442 (472)
T KOG2067|consen 420 TPSDISRVASKVLT-GKPSVAAFG 442 (472)
T ss_pred CHHHHHHHHHHHhc-CCceeccCC
Confidence 99999999999885 455666666
No 30
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=85.63 E-value=7 Score=33.89 Aligned_cols=108 Identities=17% Similarity=0.174 Sum_probs=65.3
Q ss_pred CcEEEEecCCCCeEEEEEEEeccccCCCCCCCcHHHHHHHHHcccCCCCCHHHHHHHHH-HcCCeeeEeec------cce
Q 010710 84 GIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVE-AIGGSILASAS------REQ 156 (503)
Q Consensus 84 G~~v~~~~~~~~~~~i~l~~~~G~~~e~~~~~g~a~l~~~l~~~gt~~~s~~~l~~~l~-~~g~~~~~~~~------~~~ 156 (503)
+-.+.....+.+...+.+.+.+...... .......++..++..+ ....+...+. ..|..+++.+. ...
T Consensus 67 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~l~~~l~~~----~~s~l~~~lr~~~~l~y~v~~~~~~~~~~~~ 141 (184)
T PF05193_consen 67 GKEIVIPSKDESQSIVSIAFPGPPIKDS-KDYFALNLLSSLLGNG----MSSRLFQELREKQGLAYSVSASNSSYRDSGL 141 (184)
T ss_dssp EEEEEEEESSSSSEEEEEEEEEEETGTS-TTHHHHHHHHHHHHCS----TTSHHHHHHHTTTTSESEEEEEEEEESSEEE
T ss_pred cccccccccccccccccccccccccccc-chhhHHHHHHHHHhcC----ccchhHHHHHhccccceEEEeeeeccccceE
Confidence 3444444444466666677777666222 3567788888888554 3344555565 44433333222 234
Q ss_pred EEEEEecccCCHHHHHHHHHHhhcC---CCCChHHHHHHHHHH
Q 010710 157 MGYSFDALKTYVPEMVELLVDCVRN---PVFLDWEVNEELRKL 196 (503)
Q Consensus 157 ~~~~~~~~~~~l~~~l~ll~~~~~~---p~f~~~~~~~~k~~~ 196 (503)
+.+.+.+.+++++++++.+.+.+.. -.|++++|++.|..+
T Consensus 142 ~~i~~~~~~~~~~~~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 142 FSISFQVTPENLDEAIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp EEEEEEEEGGGHHHHHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred EEEEEEcCcccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 6777777777888877777666654 248999999988763
No 31
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=82.75 E-value=2.4 Score=25.35 Aligned_cols=26 Identities=8% Similarity=0.135 Sum_probs=21.0
Q ss_pred HHHHHHhhCCCCCCHHHHHHHHHHHH
Q 010710 399 VRELILIATPKQVTQVQLNRAKEATK 424 (503)
Q Consensus 399 ~~~l~~~~~~g~i~~~el~~ak~~~~ 424 (503)
++.+..+...|.||++|+++.|..+.
T Consensus 5 L~~L~~l~~~G~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 5 LEKLKELYDKGEISEEEYEQKKARLL 30 (31)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHh
Confidence 45666777778899999999998764
No 32
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=82.25 E-value=41 Score=33.34 Aligned_cols=165 Identities=13% Similarity=0.057 Sum_probs=93.1
Q ss_pred cCCCCceEEEEEeeeCCCCCCCchh--HHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEeeeccccCc
Q 010710 300 QADSPETHIALAFEVPGGWLKDKEA--IILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIFNNT 377 (503)
Q Consensus 300 ~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~~~~Y~~~a~~~~~~~~ 377 (503)
+.+.+.+.+.++|.... +..+.. ....+|..-.+... ++ ..-++-+|+-.+.+ .......+.
T Consensus 38 e~~~~is~l~l~~~AGS--RYe~~~~~G~sHllr~f~g~~T--------q~--~sal~ivr~se~~G----G~Lss~~tR 101 (429)
T KOG2583|consen 38 EAPTAISSLSLAFRAGS--RYEPADQQGLSHLLRNFVGRDT--------QE--RSALKIVRESEQLG----GTLSSTATR 101 (429)
T ss_pred cCCCcceEEEEEEecCc--cCCccccccHHHHHHHhcccCc--------cc--cchhhhhhhhHhhC----ceeeeeeec
Confidence 34467889999998875 444333 44445544433221 11 22334566655533 222333345
Q ss_pred ceEEEEEEeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHccCChHHHH-HHHHHHHHHhCCcCCHHH
Q 010710 378 GLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLESRVIVS-EDIGRQILTYGERKSVDQ 456 (503)
Q Consensus 378 ~~f~i~~~~~p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~ 456 (503)
-.|++.+.+..++.+-.+ ..+.++.....+-+.|++...-..+.. ....+++...+ +++-..-++.|.-.+.--
T Consensus 102 e~~~~tvt~lrd~~~~~l----~~L~~V~~~paFkPwEl~D~~~~ti~~-~l~~~t~~~~a~e~lH~aAfRngLgnslY~ 176 (429)
T KOG2583|consen 102 ELIGLTVTFLRDDLEYYL----SLLGDVLDAPAFKPWELEDVVLATIDA-DLAYQTPYTIAIEQLHAAAFRNGLGNSLYS 176 (429)
T ss_pred ceEEEEEEEecccHHHHH----HHHHHhhcccCcCchhhhhhhhhhhHH-HhhhcChHHHHHHHHHHHHHhcccCCcccC
Confidence 678888888888774444 444555554348888888877422222 33344554443 444444344454333211
Q ss_pred HHHHHccCCHHHHHHHHHHhhcCCceEEE
Q 010710 457 FLSVLEHITLDDITNIAQKIISSPLTMAS 485 (503)
Q Consensus 457 ~~~~i~~vT~~di~~~a~~~l~~~~~~~~ 485 (503)
-.-.+.+++.+||..|+++++......++
T Consensus 177 p~~~vg~vss~eL~~Fa~k~fv~gn~~lv 205 (429)
T KOG2583|consen 177 PGYQVGSVSSSELKDFAAKHFVKGNAVLV 205 (429)
T ss_pred CcccccCccHHHHHHHHHHHhhccceEEE
Confidence 12259999999999999999975544433
No 33
>COG5023 Tubulin [Cytoskeleton]
Probab=76.32 E-value=32 Score=33.77 Aligned_cols=148 Identities=15% Similarity=0.077 Sum_probs=85.8
Q ss_pred CCCCCCCcccHHHHHHHhhcC----CeEEEEeeeccccCcceEEEEEEeCcchHHHHH---------------HHHHHHH
Q 010710 342 AGGPGKGMHTRLYLRVLNEYQ----QIQSFSAFNSIFNNTGLFGIYACTGSDFVSKAV---------------DLVVREL 402 (503)
Q Consensus 342 ~gg~g~g~~s~L~~~lR~~~~----~~Y~~~a~~~~~~~~~~f~i~~~~~p~~~~~~~---------------~~~~~~l 402 (503)
+||-|.||.+-|-++||++++ +.|+|.-.... . -+..+|-+..-.+ +++.+..
T Consensus 140 gGGTGSG~GslLLerl~~eypkK~~~tfSV~P~p~~----S----d~VVePYNsvLt~h~l~ensD~tf~~DNeal~di~ 211 (443)
T COG5023 140 GGGTGSGLGSLLLERLREEYPKKIKLTFSVFPAPKV----S----DVVVEPYNSVLTLHRLLENSDCTFVVDNEALYDIC 211 (443)
T ss_pred cCcCcccHHHHHHHHHHHhcchhheeEEEeccCCcc----C----cceecccHHHHHHHHHHhcCCceEEechHHHHHHH
Confidence 689999999999999999987 45555432110 0 0011111111000 1222333
Q ss_pred HHhhCCCCCCHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHhCCcCCH------------HHHHHHHccCCHHHHH
Q 010710 403 ILIATPKQVTQVQLNRAKEATKSAVLMNLESRVIVSEDIGRQILTYGERKSV------------DQFLSVLEHITLDDIT 470 (503)
Q Consensus 403 ~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------------~~~~~~i~~vT~~di~ 470 (503)
.+.+.-+.++=+++.+.+..+.+.....+.=+.+...++... ...--|.++ .+-.+..++.|..
T Consensus 212 ~~~L~i~~P~y~~lN~LIs~VmSsvTtslRfpG~ln~dl~~~-~~nLVP~PrlHF~l~sytP~~s~~~~~~~~~sv~--- 287 (443)
T COG5023 212 RRNLRIQNPSYDDLNQLISTVMSSVTTSLRFPGYLNVDLRSI-QTNLVPYPRLHFPLVSYTPFTSDGSAAHEKNSVS--- 287 (443)
T ss_pred HHhcCCCCCChHHHHHHHHHHHHhhhheeecCccccchHHHH-HhcCCCCCcccccccccCcccchhhHHHhcccHH---
Confidence 322222248999999999999999888877666655554332 212212111 2234456666654
Q ss_pred HHHHHhhcCCceEEEEccCCCCHHHHHhHhh
Q 010710 471 NIAQKIISSPLTMASYVINVPGYESVSSKFH 501 (503)
Q Consensus 471 ~~a~~~l~~~~~~~~~~~~~p~~~~~~~~~~ 501 (503)
++.+++|.++..++..-+.-+.|-.+...|+
T Consensus 288 evt~~~f~p~N~mv~~dpr~g~y~~~~~l~r 318 (443)
T COG5023 288 EVTNQLFDPKNQMVSCDPRKGRYMAVCLLFR 318 (443)
T ss_pred HHHHHHhCcccceeeecCCCCeeeehhHHHh
Confidence 5567889888888888556666666555554
No 34
>KOG1374 consensus Gamma tubulin [Cytoskeleton]
Probab=73.79 E-value=4.7 Score=39.29 Aligned_cols=169 Identities=17% Similarity=0.206 Sum_probs=90.5
Q ss_pred HHHHHHHhcCCCCCCC--------CCCCCCCcccHHHHHHHhhcC----CeEEEEeeeccccC------cceEEE-EEEe
Q 010710 326 ILTVLQVLMGGGGSFS--------AGGPGKGMHTRLYLRVLNEYQ----QIQSFSAFNSIFNN------TGLFGI-YACT 386 (503)
Q Consensus 326 ~~~vl~~lL~~~~~~~--------~gg~g~g~~s~L~~~lR~~~~----~~Y~~~a~~~~~~~------~~~f~i-~~~~ 386 (503)
.+.++..=..+.-+|+ |||-|.||.+.|.++|++++. ..|++.....-..+ ...+.+ ...-
T Consensus 118 ImdiIdrEad~~DsleGF~l~hSiAGGTGSGlGS~llErL~drypkkliqtysVfPn~d~ssdVVVQpYNsiLtL~rL~~ 197 (448)
T KOG1374|consen 118 IMDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSFLLERLNDRYPKKLVQTYSVFPNQDESSDVVVQPYNSILTLKRLTE 197 (448)
T ss_pred HHHHHHHhhcCCCcccceeEEEeecCCCCcchHHHHHHHHHHhchhhhheeeeeccCCCCccceEEecchHHHHHHHHhh
Confidence 4556666566666663 999999999999999999876 46666544311100 001100 0000
Q ss_pred Ccch----HHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHH-----------hCC-
Q 010710 387 GSDF----VSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLESRVIVSEDIGRQILT-----------YGE- 450 (503)
Q Consensus 387 ~p~~----~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~g~- 450 (503)
+++. --.++..+... .+..+ .+|=..+........+.-...+..+.+....+..-+.. .+.
T Consensus 198 nsD~vVVlDN~AL~ria~~--~l~i~-~ptF~~iNqLvstims~st~t~r~p~Ym~n~l~~l~~~LiP~P~lhfl~~~~t 274 (448)
T KOG1374|consen 198 NSDCVVVLDNTALHRIAAD--RLHIQ-NPTFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLYASLIPTPELHFLMTGYT 274 (448)
T ss_pred CCCeEEEeccHHHHHHHHH--HhcCC-CCCHHHHHHHHHHHHhhccccccchhhccCcHHHHHhhcCCCCCeeeeeccCC
Confidence 1110 01122222222 22222 37777777666666655555555555444443322110 111
Q ss_pred cCCHHHHHHHHccCCHHHHHHHHHHhhcCCceEEEE---ccCCCCHHHHHhH
Q 010710 451 RKSVDQFLSVLEHITLDDITNIAQKIISSPLTMASY---VINVPGYESVSSK 499 (503)
Q Consensus 451 ~~~~~~~~~~i~~vT~~di~~~a~~~l~~~~~~~~~---~~~~p~~~~~~~~ 499 (503)
|.. .+..... .++..-+.++.+++|.++..++.. ....|++-.|-.-
T Consensus 275 P~~-sd~~~~~-~~rkttvldvmRrLL~pkn~mvs~~~~~~~~~~~~si~n~ 324 (448)
T KOG1374|consen 275 PLT-SDNSLAT-AVRKTTVLDVMRRLLQPKNMMVSTADDLSGNPCYISILNI 324 (448)
T ss_pred ccc-Chhhhhh-hhhcchHHHHHHHHhCcchhhhhccccccCCcchHhHHhh
Confidence 111 1122222 677778888899999999888888 5577777665543
No 35
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=62.59 E-value=1.3e+02 Score=27.98 Aligned_cols=117 Identities=17% Similarity=0.122 Sum_probs=70.1
Q ss_pred CCCCceEEEEEeeeCCCCCCCchhHHHHHHHHhcCCCCCCCCCCCCCCcccHHHHHHHhhcCCeEEEEe--eecc---cc
Q 010710 301 ADSPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSA--FNSI---FN 375 (503)
Q Consensus 301 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~vl~~lL~~~~~~~~gg~g~g~~s~L~~~lR~~~~~~Y~~~a--~~~~---~~ 375 (503)
....-+++.+.|+.++ .+.++...+.++..+|+.-+. .... +..|-..+...-| +-+++. .... ..
T Consensus 87 ~TnGI~Y~~l~fdl~~--l~~e~l~yl~Ll~~ll~~lgT-----~~~s-y~el~~~i~~~tG-Gis~~~~~~~~~~~~~~ 157 (248)
T PF08367_consen 87 PTNGIVYVRLYFDLSD--LPEEDLPYLPLLTDLLGELGT-----KNYS-YEELSNEIDLYTG-GISFSIEVYTDYDDDDK 157 (248)
T ss_dssp --TTEEEEEEEEE-TT--S-CCCHCCHHHHHHHCCCS-B-----SSS--HHHHHHHHHHHSS-EEEEEEEEEEEECTECC
T ss_pred CCCCeEEEEEEecCCC--CCHHHHHhHHHHHHHHHhCCC-----CCCC-HHHHHHHHHHhCC-CeEEEeeeccCCCCccc
Confidence 3467889999999997 788899999999999996532 1111 2344444444444 233332 2222 11
Q ss_pred CcceEEEEEEeCcchHHHHHHHHHHHHHHhhCCCCCCHH-HHHHHHHHHHHHHHHc
Q 010710 376 NTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQV-QLNRAKEATKSAVLMN 430 (503)
Q Consensus 376 ~~~~f~i~~~~~p~~~~~~~~~~~~~l~~~~~~g~i~~~-el~~ak~~~~~~~~~~ 430 (503)
....|.+.+.|-.++++++++.+.+.+.+. .+++. .+.....+.++.+...
T Consensus 158 ~~~~l~is~k~L~~~~~~~~~ll~eil~~~----~f~d~~rl~~ll~~~~s~~~~~ 209 (248)
T PF08367_consen 158 YRPYLVISAKCLDEKLDEAFELLSEILTET----DFDDKERLKELLKELKSDMESS 209 (248)
T ss_dssp CEEEEEEEEEEEGGGHHHHHHHHHHHHHCB-----TT-HHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEEEeHhhhHHHHHHHHHHHHhcc----CCCcHHHHHHHHHHHHHHHHHh
Confidence 345677888888999999999887777654 36665 4455555555554443
No 36
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2.4.2.19 from EC is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [, ]. Unlike IPR004393 from INTERPRO, this domain also includes the molybdenum transport system protein ModD.; GO: 0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity, 0009435 NAD biosynthetic process; PDB: 3C2O_A 3C2F_A 3C2E_A 3C2R_A 3C2V_A 1QPN_E 1QPO_A 1QPQ_F 1QPR_E 2I14_D ....
Probab=34.58 E-value=51 Score=28.83 Aligned_cols=42 Identities=29% Similarity=0.398 Sum_probs=33.8
Q ss_pred hhhcCCCHHHHHHHHHhhc-CCCCeEEEEeC-CChHHHHHHHHh
Q 010710 233 SALNRLDGTILEEIVAENF-TAPRMVLAASG-VDLDELLPIAEP 274 (503)
Q Consensus 233 ~~l~~l~~~~l~~f~~~~~-~~~~~~l~i~G-~~~~~l~~l~~~ 274 (503)
=.+++.+++++++..+..- ...++.+.++| ++.+.+.++++.
T Consensus 104 I~lD~~~~~~~~~~v~~l~~~~~~v~ie~SGGI~~~ni~~ya~~ 147 (169)
T PF01729_consen 104 IMLDNMSPEDLKEAVEELRELNPRVKIEASGGITLENIAEYAKT 147 (169)
T ss_dssp EEEES-CHHHHHHHHHHHHHHTTTSEEEEESSSSTTTHHHHHHT
T ss_pred EEecCcCHHHHHHHHHHHhhcCCcEEEEEECCCCHHHHHHHHhc
Confidence 4578899999999998553 35669999999 999999998754
No 37
>PF05120 GvpG: Gas vesicle protein G ; InterPro: IPR007804 Gas vesicles are intracellular, protein-coated, and hollow organelles found in cyanobacteria and halophilic archaea. They are permeable to ambient gases by diffusion and provide buoyancy, enabling cells to move upwards in water to access oxygen and/or light. Proteins containing this family are involved in the formation of gas vesicles [].
Probab=27.24 E-value=2.2e+02 Score=21.40 Aligned_cols=34 Identities=9% Similarity=0.091 Sum_probs=24.0
Q ss_pred HHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHH
Q 010710 396 DLVVRELILIATPKQVTQVQLNRAKEATKSAVLM 429 (503)
Q Consensus 396 ~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~ 429 (503)
..-+.++......|+||++++++....+...+..
T Consensus 34 ~~~L~~L~~~~e~GEIseeEf~~~E~eLL~rL~~ 67 (79)
T PF05120_consen 34 RRELAELQEALEAGEISEEEFERREDELLDRLEE 67 (79)
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 3344445555555789999999999988876643
No 38
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=26.42 E-value=3e+02 Score=21.08 Aligned_cols=77 Identities=10% Similarity=0.211 Sum_probs=42.9
Q ss_pred cchHHHHHHHHHHHHHHhh---CCC-CCCHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHhCC-cCCHHHHHHHHc
Q 010710 388 SDFVSKAVDLVVRELILIA---TPK-QVTQVQLNRAKEATKSAVLMNLESRVIVSEDIGRQILTYGE-RKSVDQFLSVLE 462 (503)
Q Consensus 388 p~~~~~~~~~~~~~l~~~~---~~g-~i~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~i~ 462 (503)
|-.+++++..+.+.|.... .+| .|+.+||..+-............+. .....+.+.+-..+. ..+.+++...+.
T Consensus 2 ~~~le~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~-~~v~~i~~elD~n~dG~Idf~EF~~l~~ 80 (93)
T cd05026 2 PTQLEGAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDP-MLVDKIMNDLDSNKDNEVDFNEFVVLVA 80 (93)
T ss_pred CcHHHHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCH-HHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 4457778888888787776 234 3899999887654333322222222 233445544322222 245677776665
Q ss_pred cCC
Q 010710 463 HIT 465 (503)
Q Consensus 463 ~vT 465 (503)
.++
T Consensus 81 ~l~ 83 (93)
T cd05026 81 ALT 83 (93)
T ss_pred HHH
Confidence 553
No 39
>COG0012 Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis]
Probab=24.76 E-value=5.4e+02 Score=25.68 Aligned_cols=133 Identities=13% Similarity=0.052 Sum_probs=65.3
Q ss_pred CCCcccHHHHHHHhhcCCeEEEEeeeccccCcceEEEEEEeCcchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHH
Q 010710 346 GKGMHTRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKS 425 (503)
Q Consensus 346 g~g~~s~L~~~lR~~~~~~Y~~~a~~~~~~~~~~f~i~~~~~p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~ 425 (503)
|.|+.+.+-.+||+-...+.-|.|+-... .-.+....+|-.-.+.+ ..|+....- +.=+..+++.......
T Consensus 84 GeGLGNkFL~~IRevdaI~hVVr~f~d~d----i~hv~~~vDP~~DIe~I---~~EL~l~d~--~~lek~~~r~~k~a~~ 154 (372)
T COG0012 84 GEGLGNKFLDNIREVDAIIHVVRCFGDTD----IEHVEGKVDPVEDIEII---NTELILWDL--ESLEKRWERLEKRAKA 154 (372)
T ss_pred CCCcchHHHHhhhhcCeEEEEEEecCCCc----ccCCCCCcCcHHHHHHH---HHHHHHHHH--HHHHHHHHHHHHHHhc
Confidence 55677999999999988888888875432 22233336675443333 333321110 1223334444443332
Q ss_pred HHHHccCChHHHHHHHH--HHHHHhCCcCCHHHHHH-HHccCCHHHHHHHHHHhh-cCCceEEEE-ccCCCCH
Q 010710 426 AVLMNLESRVIVSEDIG--RQILTYGERKSVDQFLS-VLEHITLDDITNIAQKII-SSPLTMASY-VINVPGY 493 (503)
Q Consensus 426 ~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~-~i~~vT~~di~~~a~~~l-~~~~~~~~~-~~~~p~~ 493 (503)
.-. ..+........+. ...+..+.+ ... .+...+.+|+..+....+ ..+|.+.+. +...+..
T Consensus 155 ~~~-~~k~~~~~l~~l~~~~~~l~~~~~-----~~~~~~~~~~~e~~~~l~~l~llt~KP~lyvaN~~e~~~~ 221 (372)
T COG0012 155 GKK-LDKELKEELSLLGKLEEHLEEGKP-----ARGLDLSKWSEEDLEALASLNLLTAKPMLYVANVSEDDLA 221 (372)
T ss_pred ccc-hHHHHHHHHHHHHhHHHHHHhhhh-----hhcCCcccCCHHHHHHHHHhhhhhcCCeEEEEECCccccc
Confidence 100 0011111111111 011111111 000 345688899998887555 477888888 6666653
No 40
>PRK11032 hypothetical protein; Provisional
Probab=24.45 E-value=1.5e+02 Score=25.68 Aligned_cols=37 Identities=8% Similarity=0.092 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHc
Q 010710 391 VSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMN 430 (503)
Q Consensus 391 ~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~ 430 (503)
+.++++.+.+.+.... ++|++|++..+..+..++..-
T Consensus 26 l~~~ve~a~~~~~~~~---elT~dEl~lv~~ylkRDL~ef 62 (160)
T PRK11032 26 IDALVESARKRVDAAG---ELTRDEVDLITRAVRRDLEEF 62 (160)
T ss_pred HHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHH
Confidence 5666666655554442 599999999999888877653
No 41
>PF07295 DUF1451: Protein of unknown function (DUF1451); InterPro: IPR009912 This family consists of several hypothetical bacterial proteins of around 160 residues in length. Members of this family contain four highly conserved cysteine resides toward the C-terminal region of the protein. The function of this family is unknown.
Probab=22.44 E-value=2.6e+02 Score=23.81 Aligned_cols=44 Identities=11% Similarity=0.050 Sum_probs=30.6
Q ss_pred cchHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHccCCh
Q 010710 388 SDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLESR 434 (503)
Q Consensus 388 p~~~~~~~~~~~~~l~~~~~~g~i~~~el~~ak~~~~~~~~~~~~~~ 434 (503)
+..+.++++...+.+.... ++|++|++.++..+..++..-.+..
T Consensus 13 ~~~L~~~le~a~e~~~~~~---elT~eEl~lv~~ylkRDl~~~a~~~ 56 (146)
T PF07295_consen 13 EEELQEALEKAKEYLVAAG---ELTREELALVSAYLKRDLEEFARYY 56 (146)
T ss_pred HHHHHHHHHHHHHHHHHHh---hcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666666666555543 4999999999999988876644333
No 42
>COG0157 NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
Probab=21.98 E-value=1.8e+02 Score=27.60 Aligned_cols=44 Identities=30% Similarity=0.276 Sum_probs=37.6
Q ss_pred ChhhhcCCCHHHHHHHHHhhcCCCCeEEEEeC-CChHHHHHHHHh
Q 010710 231 PESALNRLDGTILEEIVAENFTAPRMVLAASG-VDLDELLPIAEP 274 (503)
Q Consensus 231 ~~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~l~~~ 274 (503)
..-.|++++++++++..+..-.+.++.+-++| ++.+.+...+..
T Consensus 210 DiImLDNm~~e~~~~av~~l~~~~~~~lEaSGgIt~~ni~~yA~t 254 (280)
T COG0157 210 DIIMLDNMSPEELKEAVKLLGLAGRALLEASGGITLENIREYAET 254 (280)
T ss_pred CEEEecCCCHHHHHHHHHHhccCCceEEEEeCCCCHHHHHHHhhc
Confidence 34568899999999999887667799999999 999999888764
No 43
>COG3462 Predicted membrane protein [Function unknown]
Probab=20.86 E-value=1.5e+02 Score=23.58 Aligned_cols=23 Identities=13% Similarity=0.031 Sum_probs=15.7
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHH
Q 010710 401 ELILIATPKQVTQVQLNRAKEAT 423 (503)
Q Consensus 401 ~l~~~~~~g~i~~~el~~ak~~~ 423 (503)
.+++....|++||||..+.++.+
T Consensus 93 IlkER~AkGEItEEEY~r~~~~i 115 (117)
T COG3462 93 ILKERYAKGEITEEEYRRIIRTI 115 (117)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHh
Confidence 33333333679999999988764
No 44
>cd04922 ACT_AKi-HSDH-ThrA_2 ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). This CD includes the second of two ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). The ACT domains are positioned between the N-terminal catalytic domain of AK and the C-terminal HSDH domain found in bacteria (Escherichia coli (EC) ThrA) and higher plants (Zea mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. HSDH is the first committed reaction in the branch of the pathway that leads to Thr and Met. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathwa
Probab=20.71 E-value=2.5e+02 Score=19.21 Aligned_cols=46 Identities=9% Similarity=-0.052 Sum_probs=32.9
Q ss_pred HHHHHHHHHcCCeeeEee-ccceEEEEEecccCCHHHHHHHHHHhhc
Q 010710 135 LRIVREVEAIGGSILASA-SREQMGYSFDALKTYVPEMVELLVDCVR 180 (503)
Q Consensus 135 ~~l~~~l~~~g~~~~~~~-~~~~~~~~~~~~~~~l~~~l~ll~~~~~ 180 (503)
.++.+.+...|.++..-. +.....+++....++.+.+++.|++.+.
T Consensus 19 ~~i~~~l~~~~I~v~~i~~~~s~~~is~~v~~~~~~~~~~~lh~~~~ 65 (66)
T cd04922 19 ATFFSALAKANVNIRAIAQGSSERNISAVIDEDDATKALRAVHERFF 65 (66)
T ss_pred HHHHHHHHHCCCCEEEEEecCcccEEEEEEeHHHHHHHHHHHHHHHh
Confidence 345566777887775443 2244778888888889999999988775
No 45
>PRK06851 hypothetical protein; Provisional
Probab=20.58 E-value=1.8e+02 Score=29.06 Aligned_cols=45 Identities=18% Similarity=0.415 Sum_probs=24.4
Q ss_pred HHHHHhcCCCCC--CCCCCCCCCcccHHHHHHHhhc-CCeEEEEeeecc
Q 010710 328 TVLQVLMGGGGS--FSAGGPGKGMHTRLYLRVLNEY-QQIQSFSAFNSI 373 (503)
Q Consensus 328 ~vl~~lL~~~~~--~~~gg~g~g~~s~L~~~lR~~~-~~~Y~~~a~~~~ 373 (503)
.++..++.+... +=.||||.|-++.+ +++.+.. ..+|.+......
T Consensus 20 s~~~~~~~~~~~~~il~G~pGtGKStl~-~~i~~~~~~~g~~Ve~~~~~ 67 (367)
T PRK06851 20 SLYDSIIDGANRIFILKGGPGTGKSTLM-KKIGEEFLEKGYDVEFLHCS 67 (367)
T ss_pred hhhhhhccccceEEEEECCCCCCHHHHH-HHHHHHHHHcCCeEEEEEcC
Confidence 455555543322 24789999866554 3444433 235666655433
No 46
>PF00531 Death: Death domain; InterPro: IPR000488 The death domain (DD) is a homotypic protein interaction module composed of a bundle of six alpha-helices. DD is related in sequence and structure to the death effector domain (DED, see IPR001875 from INTERPRO) and the caspase recruitment domain (CARD, see IPR001315 from INTERPRO), which work in similar pathways and show similar interaction properties []. DD bind each other forming oligomers. Mammals have numerous and diverse DD-containing proteins []. Within these proteins, the DD domains can be found in combination with other domains, including: CARDs, DEDs, ankyrin repeats (IPR002110 from INTERPRO), caspase-like folds, kinase domains, leucine zippers (IPR002158 from INTERPRO), leucine-rich repeats (LRR) (IPR001611 from INTERPRO), TIR domains (IPR000157 from INTERPRO), and ZU5 domains (IPR000906 from INTERPRO) []. Some DD-containing proteins are involved in the regulation of apoptosis and inflammation through their activation of caspases and NF-kappaB, which typically involves interactions with TNF (tumour necrosis factor) cytokine receptors [, ]. In humans, eight of the over 30 known TNF receptors contain DD in their cytoplasmic tails; several of these TNF receptors use caspase activation as a signalling mechanism. The DD mediates self-association of these receptors, thus giving the signal to downstream events that lead to apoptosis. Other DD-containing proteins, such as ankyrin, MyD88 and pelle, are probably not directly involved in cell death signalling. DD-containing proteins also have links to innate immunity, communicating with Toll family receptors through bipartite adapter proteins such as MyD88 [].; GO: 0005515 protein binding, 0007165 signal transduction; PDB: 3OQ9_L 3EZQ_F 1E41_A 1E3Y_A 2GF5_A 2OF5_L 3EWV_E 3G5B_A 3MOP_L 2A9I_A ....
Probab=20.57 E-value=3.5e+02 Score=19.72 Aligned_cols=60 Identities=18% Similarity=0.334 Sum_probs=38.0
Q ss_pred CCHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHhCCcCCHHHHHHHHccCCHHHHHHHHHHhh
Q 010710 411 VTQVQLNRAKEATKSAVLMNLESRVIVSEDIGRQILTYGERKSVDQFLSVLEHITLDDITNIAQKII 477 (503)
Q Consensus 411 i~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~vT~~di~~~a~~~l 477 (503)
+++.+++..+..-. ...++...+-..|.. ..|.......+.+++..+...|+.+..+.++
T Consensus 24 ~~~~~i~~i~~~~~-----~~~~~~~~~L~~W~~--~~~~~at~~~L~~aL~~~~~~d~~~~i~~~~ 83 (83)
T PF00531_consen 24 LSESEIENIEEENP-----DLREQTYEMLQRWRQ--REGPNATVDQLIQALRDIGRNDLAEKIEQML 83 (83)
T ss_dssp S-HHHHHHHHHHST-----SHHHHHHHHHHHHHH--HHGSTSSHHHHHHHHHHTTHHHHHHHHHHH-
T ss_pred cCHHHHHHHHHhCC-----ChHHHHHHHHHHHHH--hcCCCCcHHHHHHHHHHCCcHHHHHHHHhhC
Confidence 99999988876211 011222222233333 2455667899999999999999999888764
No 47
>PRK06978 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=20.21 E-value=2e+02 Score=27.66 Aligned_cols=41 Identities=32% Similarity=0.426 Sum_probs=34.5
Q ss_pred hhhhcCCCHHHHHHHHHhhcCCCCeEEEEeC-CChHHHHHHHHh
Q 010710 232 ESALNRLDGTILEEIVAENFTAPRMVLAASG-VDLDELLPIAEP 274 (503)
Q Consensus 232 ~~~l~~l~~~~l~~f~~~~~~~~~~~l~i~G-~~~~~l~~l~~~ 274 (503)
.=.+++++++++++..+.. +.++.+-++| ++.+.+.++++.
T Consensus 228 iImLDnmspe~l~~av~~~--~~~~~lEaSGGIt~~ni~~yA~t 269 (294)
T PRK06978 228 SVLLDNFTLDMMREAVRVT--AGRAVLEVSGGVNFDTVRAFAET 269 (294)
T ss_pred EEEECCCCHHHHHHHHHhh--cCCeEEEEECCCCHHHHHHHHhc
Confidence 3567899999999998754 4589999999 999999998764
No 48
>PF14659 Phage_int_SAM_3: Phage integrase, N-terminal SAM-like domain; PDB: 2KD1_A 2KOB_A 2KHQ_A 3LYS_E 2KIW_A 2KKP_A.
Probab=20.20 E-value=86 Score=21.13 Aligned_cols=17 Identities=29% Similarity=0.559 Sum_probs=12.5
Q ss_pred HccCCHHHHHHHHHHhh
Q 010710 461 LEHITLDDITNIAQKII 477 (503)
Q Consensus 461 i~~vT~~di~~~a~~~l 477 (503)
|.+||+.+|+++.++++
T Consensus 42 i~~It~~~i~~~~~~l~ 58 (58)
T PF14659_consen 42 IKDITPRDIQNFINELL 58 (58)
T ss_dssp GGG--HHHHHHHHHHH-
T ss_pred HHHCCHHHHHHHHHHcC
Confidence 78899999999998874
Done!