BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010711
(503 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BID8|FXL14_MOUSE F-box/LRR-repeat protein 14 OS=Mus musculus GN=Fbxl14 PE=2 SV=1
Length = 400
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 180/338 (53%), Gaps = 48/338 (14%)
Query: 176 LSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
+ G+ N++SL +S C +TD+G+ + + +GSL LN
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGH----------------------AFVQEIGSLRALN 123
Query: 235 LNRC-QLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHLK-GLTNLESLNLDSC-GIG 289
L+ C Q++D + ++ + L+VL LG + IT+ L+ + GL L+SLNL SC +
Sbjct: 124 LSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLS 183
Query: 290 DEGLVNLTGLCN--------LKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSFTG-ISD 338
D G+ +L G+ L+ L L D Q + L+H+S GLT L +NLSF G ISD
Sbjct: 184 DVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISD 243
Query: 339 GSLRKLAGLSSLKSLNLDA-RQITDTGLA--ALTSLTGLTHLDL-FGARITDSGAAYL-R 393
L L+ + SL+SLNL + I+DTG+ A+ SL L+ LD+ F ++ D AY+ +
Sbjct: 244 AGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLR-LSGLDVSFCDKVGDQSLAYIAQ 302
Query: 394 NFKNLRSLEICGGGLTDAGV-KHIKDLSSLTLLNLSQNCNLTDKTLELIS-GLTGLVSLN 451
L+SL +C ++D G+ + ++ + L LN+ Q +TDK LELI+ L+ L ++
Sbjct: 303 GLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGID 362
Query: 452 VSN-SRITSAGLRHLKPLKNLRSLTLESCKVTANDIKR 488
+ +RIT GL + L L+ L L ++T ++ R
Sbjct: 363 LYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKVR 400
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 381
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 382 CLKVLNLGLWQMTDS 396
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 171/337 (50%), Gaps = 36/337 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTA-------ACLDSLSALG--SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A + +A G L L L CQ L+D + S+ + L++LNL F
Sbjct: 180 RHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCG 239
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRH 319
I+D L+HL + +L SLNL SC I D G+++L G L L++S +VG L +
Sbjct: 240 GISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAY 299
Query: 320 LS-GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L+S++L ISD + R + + L++LN+ +ITD GL + L+ LT
Sbjct: 300 IAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLT 359
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
+DL+G RIT G + L+ L + +TD+
Sbjct: 360 GIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDS 396
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 124/246 (50%), Gaps = 34/246 (13%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++G+ N+ESLNL C G+G + + L L C +++D+ +G ++L G
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIA-QYLKG 144
Query: 323 LTNLE---SINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLT------ 372
L LE N++ TG+ L GL LKSLNL + R ++D G+ L +T
Sbjct: 145 LEVLELGGCSNITNTGL----LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEG 200
Query: 373 --GLTHLDLFG-ARITDSGAAYL-RNFKNLR--SLEICGGGLTDAGVKHIKDLSSLTLLN 426
GL L L ++TD ++ R LR +L CGG ++DAG+ H+ + SL LN
Sbjct: 201 CLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG-ISDAGLLHLSHMGSLRSLN 259
Query: 427 LSQNCNLTDK-TLELISGLTGLVSLNVSN-SRITSAGLRHL-KPLKNLRSLTLESCKVTA 483
L N++D + L G L L+VS ++ L ++ + L L+SL+L SC ++
Sbjct: 260 LRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISD 319
Query: 484 NDIKRL 489
+ I R+
Sbjct: 320 DGINRM 325
>sp|Q17R01|FXL14_BOVIN F-box/LRR-repeat protein 14 OS=Bos taurus GN=FBXL14 PE=2 SV=1
Length = 400
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 180/338 (53%), Gaps = 48/338 (14%)
Query: 176 LSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
+ G+ N++SL +S C +TD+G+ + + +GSL LN
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGH----------------------AFVQEIGSLRALN 123
Query: 235 LNRC-QLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHLK-GLTNLESLNLDSC-GIG 289
L+ C Q++D + ++ + L+VL LG + IT+ L+ + GL L+SLNL SC +
Sbjct: 124 LSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLS 183
Query: 290 DEGLVNLTGLCN--------LKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSFTG-ISD 338
D G+ +L G+ L+ L L D Q + L+H+S GLT L +NLSF G ISD
Sbjct: 184 DVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISD 243
Query: 339 GSLRKLAGLSSLKSLNLDA-RQITDTGLA--ALTSLTGLTHLDL-FGARITDSGAAYL-R 393
L L+ + SL+SLNL + I+DTG+ A+ SL L+ LD+ F ++ D AY+ +
Sbjct: 244 AGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLR-LSGLDVSFCDKVGDQSLAYIAQ 302
Query: 394 NFKNLRSLEICGGGLTDAGV-KHIKDLSSLTLLNLSQNCNLTDKTLELIS-GLTGLVSLN 451
L+SL +C ++D G+ + ++ + L LN+ Q +TDK LELI+ L+ L ++
Sbjct: 303 GLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGID 362
Query: 452 VSN-SRITSAGLRHLKPLKNLRSLTLESCKVTANDIKR 488
+ +RIT GL + L L+ L L ++T ++ R
Sbjct: 363 LYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKVR 400
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 381
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 382 CLKVLNLGLWQMTDS 396
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 171/337 (50%), Gaps = 36/337 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTA-------ACLDSLSALG--SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A + +A G L L L CQ L+D + S+ + L++LNL F
Sbjct: 180 RHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCG 239
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRH 319
I+D L+HL + +L SLNL SC I D G+++L G L L++S +VG L +
Sbjct: 240 GISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAY 299
Query: 320 LS-GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L+S++L ISD + R + + L++LN+ +ITD GL + L+ LT
Sbjct: 300 IAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLT 359
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDA 411
+DL+G RIT G + L+ L + +TD+
Sbjct: 360 GIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDS 396
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 124/246 (50%), Gaps = 34/246 (13%)
Query: 272 LKGLTNLESLNLDSC------GIGDEGLVNLTGLCNLK---CLELSDTQVGSSGLRHLSG 322
++G+ N+ESLNL C G+G + + L L C +++D+ +G ++L G
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIA-QYLKG 144
Query: 323 LTNLE---SINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQITDTGLAALTSLT------ 372
L LE N++ TG+ L GL LKSLNL + R ++D G+ L +T
Sbjct: 145 LEVLELGGCSNITNTGL----LLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEG 200
Query: 373 --GLTHLDLFG-ARITDSGAAYL-RNFKNLR--SLEICGGGLTDAGVKHIKDLSSLTLLN 426
GL L L ++TD ++ R LR +L CGG ++DAG+ H+ + SL LN
Sbjct: 201 CLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG-ISDAGLLHLSHMGSLRSLN 259
Query: 427 LSQNCNLTDK-TLELISGLTGLVSLNVSN-SRITSAGLRHL-KPLKNLRSLTLESCKVTA 483
L N++D + L G L L+VS ++ L ++ + L L+SL+L SC ++
Sbjct: 260 LRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISD 319
Query: 484 NDIKRL 489
+ I R+
Sbjct: 320 DGINRM 325
>sp|Q8N1E6|FXL14_HUMAN F-box/LRR-repeat protein 14 OS=Homo sapiens GN=FBXL14 PE=1 SV=1
Length = 418
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 184/353 (52%), Gaps = 50/353 (14%)
Query: 176 LSGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
+ G+ N++SL +S C +TD+G+ + + +GSL LN
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGH----------------------AFVQEIGSLRALN 123
Query: 235 LNRC-QLSDDGCEKFSK-IGSLKVLNLG-FNEITDECLVHLK-GLTNLESLNLDSC-GIG 289
L+ C Q++D + ++ + L+VL LG + IT+ L+ + GL L+SLNL SC +
Sbjct: 124 LSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLS 183
Query: 290 DEGLVNLTGLCN--------LKCLELSDTQ-VGSSGLRHLS-GLTNLESINLSFTG-ISD 338
D G+ +L G+ L+ L L D Q + L+H+S GLT L +NLSF G ISD
Sbjct: 184 DVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISD 243
Query: 339 GSLRKLAGLSSLKSLNLDA-RQITDTGLA--ALTSLTGLTHLDL-FGARITDSGAAYL-R 393
L L+ + SL+SLNL + I+DTG+ A+ SL L+ LD+ F ++ D AY+ +
Sbjct: 244 AGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLR-LSGLDVSFCDKVGDQSLAYIAQ 302
Query: 394 NFKNLRSLEICGGGLTDAGV-KHIKDLSSLTLLNLSQNCNLTDKTLELIS-GLTGLVSLN 451
L+SL +C ++D G+ + ++ + L LN+ Q +TDK LELI+ L+ L ++
Sbjct: 303 GLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGID 362
Query: 452 VSN-SRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFRPE 503
+ +RIT GL + L L+ L L ++T D ++ D L + R
Sbjct: 363 LYGCTRITKRGLERITQLPCLKVLNLGLWQMT--DSEKEARGDFSPLFTVRTR 413
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 175/348 (50%), Gaps = 36/348 (10%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTA-------ACLDSLSALG--SLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGF-N 262
+ A + +A G L L L CQ L+D + S+ + L++LNL F
Sbjct: 180 RHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCG 239
Query: 263 EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLCNLKCLELSDT-QVGSSGLRH 319
I+D L+HL + +L SLNL SC I D G+++L G L L++S +VG L +
Sbjct: 240 GISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAY 299
Query: 320 LS-GLTNLESINLSFTGISDGSL-RKLAGLSSLKSLNL-DARQITDTGLAALTS-LTGLT 375
++ GL L+S++L ISD + R + + L++LN+ +ITD GL + L+ LT
Sbjct: 300 IAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLT 359
Query: 376 HLDLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 422
+DL+G RIT G + L+ L + +TD+ + D S L
Sbjct: 360 GIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPL 407
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 169/315 (53%), Gaps = 32/315 (10%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGL-- 293
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 294 --VNLTGLCNL---KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLS 348
+ GL L +C+ ++D + HLS LT ++ T I+ L ++ L
Sbjct: 325 MVRQMHGLRTLNIGQCVRITDKGLELIA-EHLSQLTGIDLYGC--TRITKRGLERITQLP 381
Query: 349 SLKSLNLDARQITDT 363
LK LNL Q+TD+
Sbjct: 382 CLKVLNLGLWQMTDS 396
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
>sp|Q723K6|INLA_LISMF Internalin-A OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlA PE=3 SV=1
Length = 800
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 183/393 (46%), Gaps = 60/393 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T+ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQEWTNPPVNYKV 426
Query: 394 N------FKNLRSLEICGGGLTDAGVKHIKDLS 420
N KN+ I ++D G D++
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGGSYAEPDIT 459
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 121/253 (47%), Gaps = 44/253 (17%)
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
DG E + +L +N N++TD + LK LT L + +++ I D + L L NL
Sbjct: 92 DGLEY---LNNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNNQIAD--ITPLANLSNL 144
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
L L + Q+ + + L LTNL + LS ISD + L+GL+SL+ L+ Q+TD
Sbjct: 145 TGLTLFNNQI--TDIDPLKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSF-GNQVTD 199
Query: 363 TGLAALTSLTGLTHLDLFGARITD-SGAAYLRNFK-------------------NLRSLE 402
L L +LT L LD+ +++D S A L N + NL L
Sbjct: 200 --LKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 403 ICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGL 462
+ G L D G + L++LT L+L+ N L +SGLT L L + ++I+
Sbjct: 258 LNGNQLKDIGT--LASLTNLTDLDLANNQ---ISNLAPLSGLTKLTELKLGANQIS---- 308
Query: 463 RHLKPLKNLRSLT 475
++ PL L +LT
Sbjct: 309 -NISPLAGLTALT 320
>sp|G2K3G6|INLA_LISM4 Internalin-A OS=Listeria monocytogenes serotype 1/2a (strain
10403S) GN=inlA PE=3 SV=1
Length = 800
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 184/393 (46%), Gaps = 60/393 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAGVKHIKDLS 420
N KN+ I ++D G D++
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGGSYAEPDIT 459
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 125/256 (48%), Gaps = 25/256 (9%)
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
+D L L +L +N + QL+D + L + + N+I D + L LTNL
Sbjct: 90 SIDGLEYLNNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNNQIAD--ITPLANLTNLT 145
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
L L + I D + L L NL LELS + S + LSGLTNL+ LSF G
Sbjct: 146 GLTLFNNQITD--IDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQ--LSF-GNQVT 198
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
L+ LA L++L+ L++ + +++D ++ L LT L L +I+D L NL
Sbjct: 199 DLKPLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISD--ITPLGILTNLD 254
Query: 400 SLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITS 459
L + G L D G + L++LT L+L+ N L +SGLT L L + ++I+
Sbjct: 255 ELSLNGNQLKDIGT--LASLTNLTDLDLANNQ---ISNLAPLSGLTKLTELKLGANQIS- 308
Query: 460 AGLRHLKPLKNLRSLT 475
++ PL L +LT
Sbjct: 309 ----NISPLAGLTALT 320
>sp|P0DJM0|INLA_LISMO Internalin-A OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlA PE=1 SV=1
Length = 800
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 184/393 (46%), Gaps = 60/393 (15%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I + +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--I 310
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD----GSLRK------ 343
L GL L LEL++ Q+ + +S L NL + L F ISD SL K
Sbjct: 311 SPLAGLTALTNLELNENQL--EDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 368
Query: 344 ----------LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
LA L+++ L+ QI+D L L +LT +T L L T++ Y
Sbjct: 369 YNNKVSDVSSLANLTNINWLSAGHNQISD--LTPLANLTRITQLGLNDQAWTNAPVNYKA 426
Query: 394 N------FKNLRSLEICGGGLTDAGVKHIKDLS 420
N KN+ I ++D G D++
Sbjct: 427 NVSIPNTVKNVTGALIAPATISDGGSYTEPDIT 459
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 121/253 (47%), Gaps = 44/253 (17%)
Query: 243 DGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNL 302
DG E + +L +N N++TD + LK LT L + +++ I D + L L NL
Sbjct: 92 DGVEY---LNNLTQINFSNNQLTD--ITPLKNLTKLVDILMNNNQIAD--ITPLANLTNL 144
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
L L + Q+ + + L LTNL + LS ISD + L+GL+SL+ L+ Q+TD
Sbjct: 145 TGLTLFNNQI--TDIDPLKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSF-GNQVTD 199
Query: 363 TGLAALTSLTGLTHLDLFGARITD-SGAAYLRNFK-------------------NLRSLE 402
L L +LT L LD+ +++D S A L N + NL L
Sbjct: 200 --LKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 403 ICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGL 462
+ G L D G + L++LT L+L+ N L +SGLT L L + ++I+
Sbjct: 258 LNGNQLKDIGT--LASLTNLTDLDLANNQ---ISNLAPLSGLTKLTELKLGANQIS---- 308
Query: 463 RHLKPLKNLRSLT 475
++ PL L +LT
Sbjct: 309 -NISPLAGLTALT 320
>sp|Q723X5|INLI_LISMF Internalin-I OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlI PE=3 SV=1
Length = 1775
Score = 75.5 bits (184), Expect = 1e-12, Method: Composition-based stats.
Identities = 117/422 (27%), Positives = 189/422 (44%), Gaps = 73/422 (17%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
+E L+ L NLTSL+ NN + L+NLV L+L + LVNL G
Sbjct: 172 IEGLQYLENLTSLNLSENN---ISDLAPIKDLVNLVSLNLSS----NRTLVNLSG----- 219
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
+ GL NL+ L +S +K + I+ + L L ++ +GC +
Sbjct: 220 -----------------VEGLVNLQELNVSANKALED-ISQVAALPVLKEISAQGCNIKT 261
Query: 219 ACLDSLSA--LGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLT 276
LD+ + L L L L+D +K+ LK L + N + + L LKG T
Sbjct: 262 LELDNPAGAILPELETFYLQENDLTD--LTSLAKLPKLKNLYIKGNA-SLKSLATLKGAT 318
Query: 277 NLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLES-INLSFTG 335
L+ ++ +C E L +++GL L+ ++LS G S L+ ++ L +L + +N++
Sbjct: 319 KLQLIDASNC-TDLETLGDISGLSELEMIQLS----GCSKLKEITSLKDLPNLVNITADS 373
Query: 336 ISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
+ L L L L++L L D + +T+ + A+T + L L L G IT G L N
Sbjct: 374 CAIEDLGTLNNLPKLQTLILSDNKDLTN--INAITDMPQLKTLALDGCGITSIGT--LDN 429
Query: 395 FKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQN----------------CNLTDKTL 438
L L++ LT + I DL L+ L++S N N++ L
Sbjct: 430 LPKLEKLDLKENQLTS--ISEINDLPRLSYLDVSVNYLTTIGELKKLPLLEWLNVSSNRL 487
Query: 439 ELISGLTGLVSL---NVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLP 495
+S LT SL NVSN+ I + G + L +L+ ++ V+ DI + D+P
Sbjct: 488 SDVSTLTNFPSLNYINVSNNVIRTVG--KMTELPSLKEFYAQNNNVS--DISMIH--DMP 541
Query: 496 NL 497
NL
Sbjct: 542 NL 543
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 125/494 (25%), Positives = 209/494 (42%), Gaps = 91/494 (18%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
S L + LSG + LKD NL ++ + C I D G L L L +L N
Sbjct: 341 SELEMIQLSGCSKLKE-ITSLKDLPNLVNITADSC-AIEDLGT--LNNLPKLQTLILSDN 396
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+T + A + L L L+ C G L L KLE L++K + S+ +
Sbjct: 397 KDLT--NINAITDMPQLKTLALDGCGITSIG--TLDNLPKLEKLDLKENQLTSISE---I 449
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
+ L L L +S + +T I LK L L LN+ ++ + +L+ SL Y+N++
Sbjct: 450 NDLPRLSYLDVSVNYLTT--IGELKKLPLLEWLNVSSNRLSD--VSTLTNFPSLNYINVS 505
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
+ G K +++ SLK N ++D ++H + NL ++ + I + G
Sbjct: 506 NNVIRTVG--KMTELPSLKEFYAQNNNVSDISMIH--DMPNLRKVDASNNLITNIG--TF 559
Query: 297 TGLCNLKCLELSDTQVGSSGLRH--------------------LSGLTNLESINLSFTGI 336
L L+ L++ ++ ++ + H + L L ++LSF I
Sbjct: 560 DNLPKLQNLDVHSNRITNTSVIHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRI 619
Query: 337 SD----GSLRKLA------------------GLSSLKSLNLDARQITDTG----LAALTS 370
G L KL G+S L++L L + TG L+AL+
Sbjct: 620 PSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYLNYTGTEGNLSALSD 679
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQN 430
LT LT L+L D+G Y+ + L +L D+ IKD+S+L+ L Q
Sbjct: 680 LTNLTELNL-----RDNG--YISDISGLSTLSRLIYLNLDS--NKIKDISALSNLTTLQE 730
Query: 431 CNLTDKTLELISGLTGLVSLN---VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 487
L + +E IS L+ L +LN +S ++I + P N+ + VTA++
Sbjct: 731 LTLENNQIEDISALSDLDNLNKLALSKNKIID-----ISPAANMVN---RGASVTASN-- 780
Query: 488 RLQSRDLPNLVSFR 501
Q+ LP ++S++
Sbjct: 781 --QTYTLPTVLSYQ 792
Score = 39.3 bits (90), Expect = 0.078, Method: Composition-based stats.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 30/207 (14%)
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
S + L L NL S+NLS ISD L + L +L SLNL + + T L+ + L L
Sbjct: 170 SNIEGLQYLENLTSLNLSENNISD--LAPIKDLVNLVSLNLSSNR-TLVNLSGVEGLVNL 226
Query: 375 THLDLFGARITD--SGAAYLRNFK-------NLRSLEI---CGGGLTDAGVKHIK--DLS 420
L++ + + S A L K N+++LE+ G L + +++ DL+
Sbjct: 227 QELNVSANKALEDISQVAALPVLKEISAQGCNIKTLELDNPAGAILPELETFYLQENDLT 286
Query: 421 SLT-------LLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRS 473
LT L NL N + K+L + G T L ++ SN L + L L
Sbjct: 287 DLTSLAKLPKLKNLYIKGNASLKSLATLKGATKLQLIDASNCTDLET-LGDISGLSELEM 345
Query: 474 LTLESCKVTANDIKRLQS-RDLPNLVS 499
+ L C + +K + S +DLPNLV+
Sbjct: 346 IQLSGC----SKLKEITSLKDLPNLVN 368
>sp|Q8NEE6|FXL13_HUMAN F-box/LRR-repeat protein 13 OS=Homo sapiens GN=FBXL13 PE=2 SV=3
Length = 735
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 197/449 (43%), Gaps = 86/449 (19%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHL-KDCSNLQSLDFNFC 91
LQ+L + P D+ M I+ +L ++LS + +T+ + L + NLQ+L +C
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 92 IQISDGGLEHLR---GLSNLTSLSFRRNNAITAQGMKAFA----GLINL----------- 133
+ +D GL++L G L L I+ QG + A G+++L
Sbjct: 307 RRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLTDN 366
Query: 134 -VKLDLERCTRI---------HGGLVNLKGL--MKLESLNIKWCNCITDSDMKPL-SGLT 180
VK +E+C+RI H + L KL + + +TD+ K +
Sbjct: 367 CVKALVEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASFKFIDKNYP 426
Query: 181 NLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ 239
NL + ++ C +TDS + L L++LT+LNL C
Sbjct: 427 NLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANC------------------------- 461
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTG 298
+++ ++G + D + LNL +C + D ++ L+
Sbjct: 462 --------------VRIGDMGLKQFLDG-----PASMRIRELNLSNCVRLSDASVMKLSE 502
Query: 299 LC-NLKCLELSDTQ-VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL- 355
C NL L L + + + + G+ ++ + +L SI+LS T IS+ L L+ LK L++
Sbjct: 503 RCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVS 562
Query: 356 DARQITDTGLAAL-TSLTGLTHLDL-FGARITDSGAAYLRNF-KNLRSLEICG-GGLTDA 411
+ +ITD G+ A S L HLD+ + ++++D L + NL SL I G +TD+
Sbjct: 563 ECYRITDDGIQAFCKSSLILEHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGCPKITDS 622
Query: 412 GVKHIK-DLSSLTLLNLSQNCNLTDKTLE 439
++ + L +L++S LTD+ LE
Sbjct: 623 AMEMLSAKCHYLHILDISGCVLLTDQILE 651
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 144/301 (47%), Gaps = 26/301 (8%)
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVL--NLGFNEITD 266
LN GC + S+S +L LN++ C D + G VL NL IT+
Sbjct: 226 LNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITN 285
Query: 267 ECLVHL-KGLTNLESLNLDSCG-IGDEGLVNLT---GLCNLKCLELSD-TQVGSSGLRHL 320
+ L + NL++L+L C D+GL L G L L+LS TQ+ G R++
Sbjct: 286 RTMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYI 345
Query: 321 S----GLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALTSLTGL 374
+ G+ +L +IN ++D ++ L S + SL A I+D AL++ L
Sbjct: 346 ANSCTGIMHL-TIN-DMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSA-CKL 402
Query: 375 THLDLFG-ARITDSGAAYL-RNFKNLRSLEICG-GGLTDAGVKHIKDLSSLTLLNLSQNC 431
+ G R+TD+ ++ +N+ NL + + G+TD+ ++ + L LT+LNL+
Sbjct: 403 RKIRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCV 462
Query: 432 NLTDKTL-ELISGLTGL--VSLNVSNS-RITSAGLRHL-KPLKNLRSLTLESCK-VTAND 485
+ D L + + G + LN+SN R++ A + L + NL L+L +C+ +TA
Sbjct: 463 RIGDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQG 522
Query: 486 I 486
I
Sbjct: 523 I 523
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 10/188 (5%)
Query: 83 LQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC 141
++ L+ + C+++SD + L NL LS R +TAQG+ + +LV +DL
Sbjct: 481 IRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGT 540
Query: 142 TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL--SGLTNLKSLQIS-CSKVTDSGIA 198
+ GL L KL+ L++ C ITD ++ S L L+ L +S CS+++D I
Sbjct: 541 DISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLI-LEHLDVSYCSQLSDMIIK 599
Query: 199 YLKGL-QKLTLLNLEGCP-VTAACLDSLSA-LGSLFYLNLNRCQLSDDGCEKFSKIG--S 253
L LT L++ GCP +T + ++ LSA L L+++ C L D + +IG
Sbjct: 600 ALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCKQ 659
Query: 254 LKVLNLGF 261
L++L + +
Sbjct: 660 LRILKMQY 667
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
SL+S+DLSG+D+++ GL L L+ L + C +I+D G++ +F +++
Sbjct: 531 SLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQ-----------AFCKSS 579
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGL--MKLESLNIKWCNCITDSDMKP 175
I L LD+ C+++ ++ + + L SL+I C ITDS M+
Sbjct: 580 LI-------------LEHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGCPKITDSAMEM 626
Query: 176 LSGLTN-LKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LS + L L IS C +TD + L+ G ++L +L ++ C
Sbjct: 627 LSAKCHYLHILDISGCVLLTDQILEDLQIGCKQLRILKMQYC 668
>sp|P23799|ESAG8_TRYBB Putative adenylate cyclase regulatory protein OS=Trypanosoma brucei
brucei GN=ESAG8 PE=2 SV=1
Length = 630
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 209/441 (47%), Gaps = 49/441 (11%)
Query: 66 GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN--NAITAQG 123
GS++ D L L+D L+ LD + C + L + L NL L +R N +
Sbjct: 121 GSELQD--LTALRDLEALEDLDLSECANLELRELMVVLTLRNLRKLRMKRTMVNDMWCSS 178
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN-IKWCNCITDSD-MKPLSGLTN 181
+ L++L ++D R G+ ++ GL +L++L + NCI + + L
Sbjct: 179 IGLLKFLVHL-EVDGSR------GVTDITGLFRLKTLEALSLDNCINITKGFDKICALPQ 231
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L SL + + VTD + + KL +L++ C L ++ + SL L+L+ C
Sbjct: 232 LTSLSLCQTNVTDKDLRCIHPDGKLKMLDISSCHEITD-LTAIGGVRSLEKLSLSGCWNV 290
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCN 301
G E+ K +L+ L++ + +V LK L NL+ L++ +C + L L L N
Sbjct: 291 TKGLEELCKFSNLRELDISGCLVLGSAVV-LKNLINLKVLSVSNCK-NFKDLNGLERLVN 348
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLS-------FTGISDGSLRKLAGLSSLKSLN 354
L+ L LS G S L ++ L+NL+ +++S F G+ D L++L+ L
Sbjct: 349 LEKLNLSGCH-GVSSLGFVANLSNLKELDISGCESLVCFDGLQD--------LNNLEVLY 399
Query: 355 L-DARQITDTGLAALTSLTGLTHLDLFGA-RITD-SGAAYLRNFKNLRSLEICGGGLTDA 411
L D + T+ G A+ +L+ + LDL G RIT SG L+ + L SLE CG ++
Sbjct: 400 LRDVKSFTNVG--AIKNLSKMRELDLSGCERITSLSGLETLKGLEEL-SLEGCGEIMS-- 454
Query: 412 GVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNL 471
I L L +L +S+ NL D L + LTGL + + R + + P+ NL
Sbjct: 455 -FDPIWSLYHLRVLYVSECGNLED--LSGLQCLTGLEEMYLHGCRKCT----NFGPIWNL 507
Query: 472 RSL-TLE-SCKVTANDIKRLQ 490
R++ LE SC +D+ LQ
Sbjct: 508 RNVCVLELSCCENLDDLSGLQ 528
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 189/430 (43%), Gaps = 56/430 (13%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
L S+ L ++VTD L + L+ LD + C +I+D L + G+ +L LS
Sbjct: 230 PQLTSLSLCQTNVTDKDLRCIHPDGKLKMLDISSCHEITD--LTAIGGVRSLEKLSLSGC 287
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
+T +G++ NL +LD+ C + G V LK L+ L+ L++ NC D+ L
Sbjct: 288 WNVT-KGLEELCKFSNLRELDISGCL-VLGSAVVLKNLINLKVLSVS--NCKNFKDLNGL 343
Query: 177 SGLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L NL+ L +S C V S + ++ L L L++ GC + C D L L +L L L
Sbjct: 344 ERLVNLEKLNLSGCHGV--SSLGFVANLSNLKELDISGCE-SLVCFDGLQDLNNLEVLYL 400
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNL-------GFNEITDECLVHLKGLTNLESLNLDSCGI 288
+ F+ +G++K L+ G IT L L+ L LE L+L+ CG
Sbjct: 401 RDVK-------SFTNVGAIKNLSKMRELDLSGCERITS--LSGLETLKGLEELSLEGCG- 450
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSG---LTNLESINL-------SFTGISD 338
+ L +L+ L +S+ L LSG LT LE + L +F I +
Sbjct: 451 EIMSFDPIWSLYHLRVLYVSEC----GNLEDLSGLQCLTGLEEMYLHGCRKCTNFGPIWN 506
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKN 397
LR + L NLD L+ L LTGL L L G IT G + N +N
Sbjct: 507 --LRNVCVLELSCCENLD-------DLSGLQCLTGLEELYLIGCEEITTIGV--VGNLRN 555
Query: 398 LRSLEICG-GGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSR 456
L+ L C L + G ++ L +L L+LS C L+ + L L SR
Sbjct: 556 LKCLSTCWCANLKELG--GLERLVNLEKLDLSGCCGLSSSVFMELMSLPKLQWFYGFGSR 613
Query: 457 ITSAGLRHLK 466
+ L+ LK
Sbjct: 614 VPDIVLKELK 623
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLE-LSDTQVGSSGLRHLS---GLTNLESINLSFTGI 336
LNL CG L +LT L +L+ LE L ++ + LR L L NL + + T +
Sbjct: 115 LNLSGCG---SELQDLTALRDLEALEDLDLSECANLELRELMVVLTLRNLRKLRMKRTMV 171
Query: 337 SDGSLRKLAGLSSLKSLNLD-ARQITD-TGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
+D + L L L +D +R +TD TGL L +L L+ L G +
Sbjct: 172 NDMWCSSIGLLKFLVHLEVDGSRGVTDITGLFRLKTLEALS---LDNCINITKGFDKICA 228
Query: 395 FKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSN 454
L SL +C +TD ++ I L +L++S +TD L I G+ L L++S
Sbjct: 229 LPQLTSLSLCQTNVTDKDLRCIHPDGKLKMLDISSCHEITD--LTAIGGVRSLEKLSLSG 286
Query: 455 SRITSAGLRHLKPLKNLRSLTLESCKVTANDI 486
+ GL L NLR L + C V + +
Sbjct: 287 CWNVTKGLEELCKFSNLRELDISGCLVLGSAV 318
>sp|Q9C5D2|FBL4_ARATH F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2
SV=1
Length = 610
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 146/512 (28%), Positives = 237/512 (46%), Gaps = 63/512 (12%)
Query: 13 ELVYSRCLTEVSLEAFRD--CALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVT 70
E V S LT+ L A + +++L L P V+ + +A + +SL S+DL G V
Sbjct: 120 ENVESSSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCYVG 179
Query: 71 DSGLIHL-KDCSNLQSLDFNFCIQISD-GGLEHLRGLS-NLTSLSFRRNNAITAQGMKAF 127
D GL + K C L+ L+ FC ++D G ++ + G S +L S+ + IT ++A
Sbjct: 180 DQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAV 239
Query: 128 AG---LINLVKLDLERCTRIH-GGLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGL-TN 181
L+ ++ LD E IH GL+ + +G +L++L ++ C +TD + L T+
Sbjct: 240 GSHCKLLEVLYLDSE---YIHDKGLIAVAQGCHRLKNLKLQ-CVSVTDVAFAAVGELCTS 295
Query: 182 LKSLQI-SCSKVTDSGI-AYLKGLQKLTLLNLEGCP-VTAACLDSLS-ALGSLFYLNLNR 237
L+ L + S TD G+ A KG +KL L L C V+ L++++ L + +N
Sbjct: 296 LERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEING 355
Query: 238 CQ-LSDDGCEKFSK-IGSLKVLNLGF-NEITDECLVHL-KGLTNLESLNLDSC-GIGD-- 290
C + G E K LK L L + I + L + KG +LE L+L C GIGD
Sbjct: 356 CHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIA 415
Query: 291 -----EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFT-GISDGSLRKL 344
+G NL L +C E+ + + S G +H LT L +L F + + +L +
Sbjct: 416 MCSIAKGCRNLKKLHIRRCYEIGNKGIISIG-KHCKSLTEL---SLRFCDKVGNKALIAI 471
Query: 345 AGLSSLKSLNLDA-RQITDTGLAALT-SLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
SL+ LN+ QI+D G+ A+ LTHLD+ + L+N ++ E
Sbjct: 472 GKGCSLQQLNVSGCNQISDAGITAIARGCPQLTHLDI----------SVLQNIGDMPLAE 521
Query: 403 ICGGG--LTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSA 460
+ G L D + H ++ L +L Q C L + T + V ITSA
Sbjct: 522 LGEGCPMLKDLVLSHCHHITDNGLNHLVQKCKLLE-TCHM-----------VYCPGITSA 569
Query: 461 GLRH-LKPLKNLRSLTLESCKVTANDIKRLQS 491
G+ + +++ + +E KVT +R S
Sbjct: 570 GVATVVSSCPHIKKVLIEKWKVTERTTRRAGS 601
>sp|P26337|ESA8C_TRYEQ Putative adenylate cyclase regulatory protein OS=Trypanosoma
equiperdum GN=ESAG8C PE=2 SV=1
Length = 630
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 202/439 (46%), Gaps = 45/439 (10%)
Query: 66 GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN--NAITAQG 123
GS++ D L L+D L+ LD + C + L + L NL L +R N +
Sbjct: 121 GSELQD--LTALRDLEALEDLDLSECANLELRELMVVLTLRNLRKLRMKRTMVNDMWCSS 178
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLK 183
+ L++L ++D R GL LK LE+L++ C IT + L L
Sbjct: 179 IGLLKFLVHL-EVDGSRGVTDITGLCRLK---TLEALSLDSCINITKG-FDKICALPQLT 233
Query: 184 SLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDD 243
SL + + VTD + + KL +L C L ++ + SL L+L+ C
Sbjct: 234 SLSLCQTNVTDKDLRCIHPDGKLKVLRYSSCHEITD-LTAIGGMRSLEKLSLSGCWNVTK 292
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLK 303
G E+ K +L+ L++ + +V LK L NL+ L++ +C + L L L NL
Sbjct: 293 GLEELCKFSNLRELDISGCLVLGSAVV-LKNLINLKVLSVSNCK-NFKDLNGLERLVNLD 350
Query: 304 CLELSDTQVGSSGLRHLSGLTNLESINLS-------FTGISDGSLRKLAGLSSLKSLNL- 355
L LS G S L ++ L+NL+ +++S F G+ D L++L+ L L
Sbjct: 351 KLNLSGCH-GVSSLGFVANLSNLKELDISGCESLVCFDGLQD--------LNNLEVLYLR 401
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGA-RITD-SGAAYLRNFKNLRSLEICGGGLTDAGV 413
D + T+ G A+ +L+ + LDL G RIT SG L+ + L SLE CG ++
Sbjct: 402 DVKSFTNVG--AIKNLSKMRELDLSGCERITSLSGLETLKGLEEL-SLEGCGEIMS---F 455
Query: 414 KHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRS 473
I L L +L +S+ NL D L + G+TGL L + R + + P+ NLR+
Sbjct: 456 DPIWSLHHLRVLYVSECGNLED--LSGLEGITGLEELYLHGCRKCT----NFGPIWNLRN 509
Query: 474 LTLE--SCKVTANDIKRLQ 490
+ + SC D+ LQ
Sbjct: 510 VCVVELSCCENLEDLSGLQ 528
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 152/345 (44%), Gaps = 55/345 (15%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
SL + LSG GL L SNL+ LD + C+ + G L+ L NL LS +N
Sbjct: 278 SLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVL--GSAVVLKNLINLKVLSV--SN 333
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHG--GLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+ + L+NL KL+L C HG L + L L+ L+I C + D
Sbjct: 334 CKNFKDLNGLERLVNLDKLNLSGC---HGVSSLGFVANLSNLKELDISGCESLVCFD--G 388
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L L NL+ L + K + + + +K L K+ L+L GC + SLS L +L L
Sbjct: 389 LQDLNNLEVLYLRDVK-SFTNVGAIKNLSKMRELDLSGCER----ITSLSGLETLKGLE- 442
Query: 236 NRCQLSDDGCEK---FSKIGSLKVLNLGFNEITDEC-----LVHLKGLTNLESLNLDSC- 286
+LS +GC + F I SL L + + EC L L+G+T LE L L C
Sbjct: 443 ---ELSLEGCGEIMSFDPIWSLHHLRVLY---VSECGNLEDLSGLEGITGLEELYLHGCR 496
Query: 287 ---GIGDEGLVNLTGLC--NLKCLE-LSDTQVGSSGLRHLSGLTNLESI---NLSFTGIS 337
G + NL +C L C E L D SGL+ L+GL L I ++ G+
Sbjct: 497 KCTNFGP--IWNLRNVCVVELSCCENLEDL----SGLQCLTGLEELYLIGCEEITPIGVV 550
Query: 338 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA 382
G+LR L LS+ NL L L L L LDL G
Sbjct: 551 -GNLRNLKCLSTCWCANLKE-------LGGLDRLVNLEKLDLSGC 587
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 90/216 (41%), Gaps = 22/216 (10%)
Query: 281 LNLDSCGIGDEGLVNLTGLCNLKCLE-LSDTQVGSSGLRHLS---GLTNLESINLSFTGI 336
LNL CG L +LT L +L+ LE L ++ + LR L L NL + + T +
Sbjct: 115 LNLSGCG---SELQDLTALRDLEALEDLDLSECANLELRELMVVLTLRNLRKLRMKRTMV 171
Query: 337 SDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNF- 395
+D + L L L +D G +T +TGL L A DS + F
Sbjct: 172 NDMWCSSIGLLKFLVHLEVD-------GSRGVTDITGLCRLKTLEALSLDSCINITKGFD 224
Query: 396 -----KNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSL 450
L SL +C +TD ++ I L +L S +TD L I G+ L L
Sbjct: 225 KICALPQLTSLSLCQTNVTDKDLRCIHPDGKLKVLRYSSCHEITD--LTAIGGMRSLEKL 282
Query: 451 NVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 486
++S + GL L NLR L + C V + +
Sbjct: 283 SLSGCWNVTKGLEELCKFSNLRELDISGCLVLGSAV 318
>sp|P35859|ALS_RAT Insulin-like growth factor-binding protein complex acid labile
subunit OS=Rattus norvegicus GN=Igfals PE=1 SV=1
Length = 603
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 160/402 (39%), Gaps = 21/402 (5%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLES 159
+GLS+L L+ N+ + F GL NL +L L + T + L GL +L
Sbjct: 166 FQGLSHLWDLNLGWNSLVVLPD-TVFQGLGNLHELVLAGNKLTYLQPAL--FCGLGELRE 222
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
L++ N + L L+ L + + +T G++ L L+L V
Sbjct: 223 LDLS-RNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGL 281
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
D+ L L L L ++ F + L+ L LG N I +GL LE
Sbjct: 282 MEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLE 341
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
L L+ I + + +GL N+ + LS + S R GL L S++L + +
Sbjct: 342 VLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHV 401
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
L AGLS L+ L L I+ +L L+ L LDL R+T + +L
Sbjct: 402 RLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLE 461
Query: 400 SLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITS 459
L + LT + + L L++S N +L L S L + L++ N+ + +
Sbjct: 462 YLLLSYNQLTTLSAEVLGPLQRAFWLDISHN-HLETLAEGLFSSLGRVRYLSLRNNSLQT 520
Query: 460 ----AGLRHLK----------PLKNLRSLTLESCKVTANDIK 487
GL L PLK LR L++ V ++
Sbjct: 521 FSPQPGLERLWLDANPWDCSCPLKALRDFALQNPGVVPRFVQ 562
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 155/408 (37%), Gaps = 37/408 (9%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLR-----GLSNLTSLSFRRNNAIT-AQGMKAFAGLINLV 134
NL SLDF + + L L GL NL L RN A G+ + +
Sbjct: 95 QNLSSLDF---LNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRNLAVGLFTHTPSLASL 151
Query: 135 KLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD 194
L R+ GL +GL L LN+ W + + D GL NL L ++ +K+T
Sbjct: 152 SLSSNLLGRLEEGL--FQGLSHLWDLNLGWNSLVVLPDTV-FQGLGNLHELVLAGNKLTY 208
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL 254
A GL G L L+L+R L F + L
Sbjct: 209 LQPALFCGL------------------------GELRELDLSRNALRSVKANVFVHLPRL 244
Query: 255 KVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 314
+ L L N IT G+ L L+L + GL L L L+ + S
Sbjct: 245 QKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIAS 304
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
R L LE + L I R GL L+ L L+ QIT+ + A + L +
Sbjct: 305 LRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNV 364
Query: 375 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLT 434
++L G + + L SL + L + LS L L L N +++
Sbjct: 365 AVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDN-SIS 423
Query: 435 DKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 482
+ ++GL+ L+ L+++ +R+T + + L +L L L ++T
Sbjct: 424 SIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLT 471
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 127/322 (39%), Gaps = 26/322 (8%)
Query: 183 KSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
++L + + ++ A + L L LNL+G + + +L L +L+YL+L R +L +
Sbjct: 77 RALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRN 136
Query: 243 DGCEKFSK------------------------IGSLKVLNLGFNEITDECLVHLKGLTNL 278
F+ + L LNLG+N + +GL NL
Sbjct: 137 LAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNL 196
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
L L + GL L+ L+LS + S L L+ + L I+
Sbjct: 197 HELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITA 256
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 398
+ G+ +L+ L+L ++ L GL L L I ++ L
Sbjct: 257 VAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFL 316
Query: 399 RSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRIT 458
L++ + G + + L L +L L+ N +T+ + SGL + +N+S + +
Sbjct: 317 EELQLGHNRIRQLGERTFEGLGQLEVLTLNDN-QITEVRVGAFSGLFNVAVMNLSGNCLR 375
Query: 459 SAGLRHLKPLKNLRSLTLE-SC 479
S R + L L SL LE SC
Sbjct: 376 SLPERVFQGLDKLHSLHLEHSC 397
>sp|P70389|ALS_MOUSE Insulin-like growth factor-binding protein complex acid labile
subunit OS=Mus musculus GN=Igfals PE=2 SV=1
Length = 603
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 155/402 (38%), Gaps = 21/402 (5%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLES 159
RGLS+L L+ N+ + F GL NL +L L + T + L L GL +L
Sbjct: 166 FRGLSHLWDLNLGWNSLVVLPD-TVFQGLGNLHELVLAGNKLTYLQPAL--LCGLGELRE 222
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
L++ N + L L+ L + + +T G++ L L+L V
Sbjct: 223 LDLS-RNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGL 281
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
D+ L L L L ++ F + L+ L LG N I +GL LE
Sbjct: 282 LEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLE 341
Query: 280 SLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDG 339
L L+ I + + GL N+ + LS + S GL L S++L + +
Sbjct: 342 VLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRI 401
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 399
L AGLS L+ L L I+ +L L+ L LDL ++T + L
Sbjct: 402 RLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLE 461
Query: 400 SLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSN----S 455
L + LT + L L+LS N L L S L L LN+ N +
Sbjct: 462 YLLLSNNQLTMLSEDVLGPLQRAFWLDLSHN-RLETPAEGLFSSLGRLRYLNLRNNSLQT 520
Query: 456 RITSAGLRHLK----------PLKNLRSLTLESCKVTANDIK 487
+ GL L PLK LR L++ V ++
Sbjct: 521 FVPQPGLERLWLDANPWDCSCPLKALRDFALQNPGVVPRFVQ 562
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 152/410 (37%), Gaps = 65/410 (15%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLR-----GLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
NL SLDF + + L L GL NL L RN + + F +L
Sbjct: 95 QNLSSLDF---LNLQGSWLRSLEPQALLGLQNLYHLHLERN-LLRSLAAGLFRHTPSLAS 150
Query: 136 LDL--ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
L L R+ GL +GL L LN+ W + + D GL NL L ++ +K+T
Sbjct: 151 LSLGNNLLGRLEEGL--FRGLSHLWDLNLGWNSLVVLPDTV-FQGLGNLHELVLAGNKLT 207
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS 253
A L GL G L L+L+R L F +
Sbjct: 208 YLQPALLCGL------------------------GELRELDLSRNALRSVKANVFIHLPR 243
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVG 313
L+ L L N IT G+ L L+L + GL L L L+ +
Sbjct: 244 LQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAIT 303
Query: 314 SSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 373
S R L LE + L I + GL L+ L L+ QI + + A L
Sbjct: 304 SLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFN 363
Query: 374 LTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHI-KDLSSLTLLNLSQNCN 432
+ ++L G LRSL +H+ + L L L+L +C
Sbjct: 364 VAVMNLSG--------------NCLRSLP-----------EHVFQGLGRLHSLHLEHSC- 397
Query: 433 LTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 482
L L +GL+GL L + ++ I+S + L L L L L + ++T
Sbjct: 398 LGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLT 447
>sp|Q8YA32|INLI_LISMO Internalin-I OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlI PE=4 SV=1
Length = 1778
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 198/469 (42%), Gaps = 111/469 (23%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG---LM 155
+E L+ L NLTSL+ NN + L+NLV L+L + LVNL G L+
Sbjct: 175 IEGLQYLENLTSLNLSENN---ISDLAPLKDLVNLVSLNLSS----NRTLVNLSGVEDLV 227
Query: 156 KLESLNIKWCNCITD-SDMKPLSGLT-------NLKSLQI-------------------- 187
L+ LN+ + D S + L L N+K+L++
Sbjct: 228 NLQELNVSANKALEDISQVASLPVLKEISAQGCNIKTLELKNPAGAVLPELETFYLQEND 287
Query: 188 -----SCSKVTDSGIAYLKGLQKL-TLLNLEGCP----VTAACLDSLSALGSLFYLN-LN 236
S +K+ Y+KG L +L L G + A+ L LG + L+ L
Sbjct: 288 LTNLTSLAKLPKLKNLYIKGNASLKSLETLNGATKLQLIDASNCTDLETLGDISGLSELE 347
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
QLS GC K +I S LK L NL ++ DSC I D G +N
Sbjct: 348 MIQLS--GCSKLKEITS------------------LKNLPNLVNITADSCAIEDLGTLN- 386
Query: 297 TGLCNLKCLELSDTQVGSSGLRHLSGLTNLESIN-LSFTGISDGSLRKLAGLSSLKSLNL 355
L L+ L LSD + L +++ +T+L + L+ G S+ L L L+ L+L
Sbjct: 387 -NLPKLQTLVLSDNE----NLTNITAITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLDL 441
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKH 415
QI T ++ +T L L++LD+ +T G L+ L L + L+D V
Sbjct: 442 KENQI--TSISEITDLPRLSYLDVSVNNLTTIGD--LKKLPLLEWLNVSSNRLSD--VST 495
Query: 416 IKDLSSLTLLNLS---------------------QNCNLTDKTLELISGLTGLVSLNVSN 454
+ + SL +N+S QN +++D + +I + L ++ SN
Sbjct: 496 LTNFPSLNYINISNNVIRTVGKMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASN 553
Query: 455 SRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFRPE 503
+ IT+ G L L+SL + S ++T+ + DLP+L +F +
Sbjct: 554 NLITNIGT--FDNLPKLQSLDVHSNRITSTSV----IHDLPSLETFNAQ 596
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 205/481 (42%), Gaps = 98/481 (20%)
Query: 74 LIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINL 133
+ LK+ NL ++ + C I D G L L L +L N +T + A L L
Sbjct: 360 ITSLKNLPNLVNITADSC-AIEDLGT--LNNLPKLQTLVLSDNENLT--NITAITDLPQL 414
Query: 134 VKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
L L+ C G L L KLE L++K N IT + ++ L L L +S + +T
Sbjct: 415 KTLTLDGCGITSIG--TLDNLPKLEKLDLKE-NQITS--ISEITDLPRLSYLDVSVNNLT 469
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS 253
I LK L L LN+ + + + +L+ SL Y+N++ + G K +++ S
Sbjct: 470 --TIGDLKKLPLLEWLNVSSNRL--SDVSTLTNFPSLNYINISNNVIRTVG--KMTELPS 523
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVG 313
LK N I+D ++H + NL ++ + I + G + L L+ L++ ++
Sbjct: 524 LKEFYAQNNSISDISMIH--DMPNLRKVDASNNLITNIGTFD--NLPKLQSLDVHSNRIT 579
Query: 314 SSGLRH--------------------LSGLTNLESINLSFTGI----------------- 336
S+ + H + L +L +NLSF I
Sbjct: 580 STSVIHDLPSLETFNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIV 639
Query: 337 SDG-----SLRKLAGLSSLKSLNLDARQITDTG----LAALTSLTGLTHLDLFGARITD- 386
SD SL + G+ L+ L+L + TG L++L+ LT LT L+L D
Sbjct: 640 SDNNSYLRSLGTMDGVPKLRILDLQNNYLNYTGTEGNLSSLSDLTNLTELNLRNNVYIDD 699
Query: 387 -SGAAYLRN--FKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISG 443
SG + L + NL S I+D+S+L+ L Q L + +E IS
Sbjct: 700 ISGLSTLSRLIYLNLDS-------------NKIEDISALSNLTNLQELTLENNKIENISA 746
Query: 444 LTGLVSLN---VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSF 500
L+ L +LN VS ++I + P+ N+ + VTA++ Q+ LP ++S+
Sbjct: 747 LSDLENLNKLVVSKNKII-----DISPVANMVN---RGAIVTASN----QTYTLPTVLSY 794
Query: 501 R 501
+
Sbjct: 795 Q 795
>sp|A6H779|FBXL2_BOVIN F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1
Length = 423
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 124/249 (49%), Gaps = 21/249 (8%)
Query: 57 SSLLSVDLSGS-DVTDSGLIHLKD-CSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSF 113
S L +DL+ +T+S L + + C +L+ L+ ++C QI+ G+E L RG L +L
Sbjct: 130 SKLKHLDLTSCVSITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLL 189
Query: 114 RRNNAITAQGMKAFAGLIN-LVKLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITD 170
R + + +K + LV L+L+ C+R+ G+V L +G +L++L + C +TD
Sbjct: 190 RGCTQLEDEALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTD 249
Query: 171 SDMKPLSGLTNLKSLQI----SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSL 224
+ + L+ N LQI CS +TD+G L + L ++LE C +T L L
Sbjct: 250 ASLTALA--LNCPRLQILEAARCSHLTDAGFTLLARNCHDLEKMDLEECILITDRTLTQL 307
Query: 225 S-ALGSLFYLNLNRCQL-SDDGCEKFSKIG----SLKVLNL-GFNEITDECLVHLKGLTN 277
S L L+L+ C+L +DDG S L+VL L ITD L HL+
Sbjct: 308 SIHCPKLQALSLSHCELITDDGILHLSNSPCGHERLRVLELDNCLLITDVALEHLEHCRG 367
Query: 278 LESLNLDSC 286
LE L L C
Sbjct: 368 LERLELYDC 376
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 142/354 (40%), Gaps = 86/354 (24%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C +I+D L R S L L +IT +K +
Sbjct: 101 QNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGIS-------- 152
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LN+ WC+ IT ++ L G L++L +
Sbjct: 153 ---------------EGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLLRGCTQLED 197
Query: 188 -------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSA 226
SCS+VTD G+ L +G +L L L GC +T A SL+A
Sbjct: 198 EALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTDA---SLTA 254
Query: 227 LGSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
L LN R Q+ + C + + GF + C +LE ++L+
Sbjct: 255 LA----LNCPRLQILEAARCSHLT--------DAGFTLLARNC-------HDLEKMDLEE 295
Query: 286 CG-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS----GLTNLESINL-SFTGIS 337
C I D L L+ C L+ L LS + + G+ HLS G L + L + I+
Sbjct: 296 CILITDRTLTQLSIHCPKLQALSLSHCELITDDGILHLSNSPCGHERLRVLELDNCLLIT 355
Query: 338 DGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
D +L L L+ L L D +Q+T G+ + + + + A +T AA
Sbjct: 356 DVALEHLEHCRGLERLELYDCQQVTRAGIKRMRAQLPHVRVHAYFAPVTPPTAA 409
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 160/374 (42%), Gaps = 79/374 (21%)
Query: 157 LESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEG 213
L L+++ C + DS +K + N++ L ++ C+K+TDS L + KL L+L
Sbjct: 80 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTS 139
Query: 214 C-PVTAACLDSLS-ALGSLFYLNLNRC-QLSDDGCEKFSK--IGSLKVLNLGFNEITDEC 268
C +T + L +S L YLNL+ C Q++ DG E + G +L G ++ DE
Sbjct: 140 CVSITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLLRGCTQLEDEA 199
Query: 269 LVHLKGLTN-LESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNL 326
L H++ + L SLNL SC + D+G+V L G L
Sbjct: 200 LKHIQNYCHELVSLNLQSCSRVTDDGVVQLC-----------------------RGCPRL 236
Query: 327 ESINLSFTG-ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARIT 385
+++ LS G ++D SL LA LN QI + + +T
Sbjct: 237 QALCLSGCGSLTDASLTALA-------LNCPRLQILEAARCS---------------HLT 274
Query: 386 DSGAAYL-RNFKNLRSLE------ICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLT--DK 436
D+G L RN +L ++ I LT + H L +L+L +C L D
Sbjct: 275 DAGFTLLARNCHDLEKMDLEECILITDRTLTQLSI-HCPKLQALSL----SHCELITDDG 329
Query: 437 TLELISGLTGLVSLNVSNSR----ITSAGLRHLKPLKNLRSLTLESC-KVTANDIKRLQS 491
L L + G L V IT L HL+ + L L L C +VT IKR+++
Sbjct: 330 ILHLSNSPCGHERLRVLELDNCLLITDVALEHLEHCRGLERLELYDCQQVTRAGIKRMRA 389
Query: 492 RDLPNL---VSFRP 502
+ LP++ F P
Sbjct: 390 Q-LPHVRVHAYFAP 402
Score = 36.2 bits (82), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSD-VTDSGLIHLKD--CSN--LQSLDFNFCIQISDGG 98
+ D+ + ++ L ++ LS + +TD G++HL + C + L+ L+ + C+ I+D
Sbjct: 299 ITDRTLTQLSIHCPKLQALSLSHCELITDDGILHLSNSPCGHERLRVLELDNCLLITDVA 358
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
LEHL L L +T G+K + V++
Sbjct: 359 LEHLEHCRGLERLELYDCQQVTRAGIKRMRAQLPHVRV 396
>sp|Q8BH16|FBXL2_MOUSE F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=1 SV=1
Length = 423
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 128/249 (51%), Gaps = 21/249 (8%)
Query: 57 SSLLSVDLSGS-DVTDSGLIHLKD-CSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSF 113
S L +DL+ VT+S L + + C NL+ L+ ++C QI+ G+E L RG L +L
Sbjct: 130 SKLKHLDLTSCVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLL 189
Query: 114 RRNNAITAQGMKAFAGLIN-LVKLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITD 170
R + + +K + LV L+L+ C+RI G+V + +G +L++L + C+ +TD
Sbjct: 190 RGCTQLEDEALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTD 249
Query: 171 SDMKPLSGLTNLKSLQI----SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSL 224
+ + L GL N LQ+ CS +TD+G L + +L ++LE C +T + L L
Sbjct: 250 ASLTAL-GL-NCPRLQVLEAARCSHLTDAGFTLLARNCHELEKMDLEECVLITDSTLVQL 307
Query: 225 S-ALGSLFYLNLNRCQL-SDDGCEKFSKIG----SLKVLNL-GFNEITDECLVHLKGLTN 277
S L L+L+ C+L +D+G S L+VL L +TD L HL+
Sbjct: 308 SIHCPKLQALSLSHCELITDEGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRG 367
Query: 278 LESLNLDSC 286
LE L L C
Sbjct: 368 LERLELYDC 376
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 142/354 (40%), Gaps = 86/354 (24%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C +I+D L R S L L ++T +K +
Sbjct: 101 QNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSVTNSSLKGIS-------- 152
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LN+ WC+ IT ++ L G LK+L +
Sbjct: 153 ---------------EGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLED 197
Query: 188 -------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSA 226
SCS++TD G+ + +G +L L L GC +T A SL+A
Sbjct: 198 EALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTDA---SLTA 254
Query: 227 LGSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
LG LN R Q+ + C + + GF + C LE ++L+
Sbjct: 255 LG----LNCPRLQVLEAARCSHLT--------DAGFTLLARNC-------HELEKMDLEE 295
Query: 286 CG-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS----GLTNLESINL-SFTGIS 337
C I D LV L+ C L+ L LS + + G+ HLS G L + L + ++
Sbjct: 296 CVLITDSTLVQLSIHCPKLQALSLSHCELITDEGILHLSSSTCGHERLRVLELDNCLLVT 355
Query: 338 DGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
D SL L L+ L L D +Q+T G+ + + + + A +T A
Sbjct: 356 DASLEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPPAV 409
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 166/366 (45%), Gaps = 63/366 (17%)
Query: 157 LESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEG 213
L L+++ C + DS +K + N++ L ++ C+K+TDS L + KL L+L
Sbjct: 80 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTS 139
Query: 214 C-PVTAACLDSLS-ALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDEC 268
C VT + L +S +L YLNL+ C Q++ +G E + LK L L G ++ DE
Sbjct: 140 CVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEA 199
Query: 269 LVHLKGLTN-LESLNLDSCG-IGDEGLVNLTGLCN-LKCLELSDTQVGSSGLRHLSGLTN 325
L H++ + L SLNL SC I D+G+V + C+ L+ L LSG +N
Sbjct: 200 LKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQAL-------------CLSGCSN 246
Query: 326 LESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALT-SLTGLTHLDLFGAR- 383
L +L+ G++ L+ L +TD G L + L +DL
Sbjct: 247 LTDASLTALGLNCPRLQVLEAAR--------CSHLTDAGFTLLARNCHELEKMDLEECVL 298
Query: 384 ITDSGAAYLR-NFKNLRSLEICGGGL-TDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELI 441
ITDS L + L++L + L TD G+ H LSS T
Sbjct: 299 ITDSTLVQLSIHCPKLQALSLSHCELITDEGILH---LSSST------------------ 337
Query: 442 SGLTGLVSLNVSNSR-ITSAGLRHLKPLKNLRSLTLESC-KVTANDIKRLQSRDLPNL-- 497
G L L + N +T A L HL+ + L L L C +VT IKR++++ LP++
Sbjct: 338 CGHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDCQQVTRAGIKRMRAQ-LPHVKV 396
Query: 498 -VSFRP 502
F P
Sbjct: 397 HAYFAP 402
Score = 35.4 bits (80), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 69 VTDSGLIHLKDCS----NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G++HL + L+ L+ + C+ ++D LEHL L L +T G+
Sbjct: 325 ITDEGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDCQQVTRAGI 384
Query: 125 KAFAGLINLVKL 136
K + VK+
Sbjct: 385 KRMRAQLPHVKV 396
>sp|O94898|LRIG2_HUMAN Leucine-rich repeats and immunoglobulin-like domains protein 2
OS=Homo sapiens GN=LRIG2 PE=2 SV=3
Length = 1065
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 133/300 (44%), Gaps = 11/300 (3%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT---AACLD 222
N I + + + L L+SL +S + +++ + +Q L LNL +T A C D
Sbjct: 130 NIIPEINAQALQFYPALESLDLSSNIISEIKTSSFPRMQ-LKYLNLSNNRITTLEAGCFD 188
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
+LS+ SL + LNR ++S + F K+ L+ L L N I + +GL +L SL
Sbjct: 189 NLSS--SLLVVKLNRNRMSMIPPKIF-KLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLK 245
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
+ GI GL N++ LEL + L GL L+ + +S I S
Sbjct: 246 MQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPD 305
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLE 402
L L+L Q+T +A L+ L L+L R+T R NL++L+
Sbjct: 306 AWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLD 365
Query: 403 ICGGGLTDA---GVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITS 459
+ ++ A + L+SLT L L N + T + GL L L+++N+ I S
Sbjct: 366 LRNNEISWAIEDASEAFAGLTSLTKLILQGN-QIKSITKKAFIGLESLEHLDLNNNAIMS 424
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 114/292 (39%), Gaps = 47/292 (16%)
Query: 105 LSNLTSLSFRR---------NNAITAQGMKAFAGLIN---LVKLDLERCTRIHGGLVNLK 152
+S + + SF R NN IT F L + +VKL+ R + I + L
Sbjct: 156 ISEIKTSSFPRMQLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMSMIPPKIFKLP 215
Query: 153 GL--MKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS---CSKVTDSGIAYLKGLQKLT 207
L ++L+ IK +T GL +L+SL++ SK+ D L +++L
Sbjct: 216 HLQFLELKRNRIKIVEGLT------FQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELE 269
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L + V L L L L+ ++S D E + L L+L +N++T
Sbjct: 270 LEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQR---LSELDLSYNQLTRL 326
Query: 268 CLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE 327
GL+ LE LNL GD + T + R LS L L+
Sbjct: 327 DESAFVGLSLLERLNL-----GDNRV----------------THIADGVFRFLSNLQTLD 365
Query: 328 SINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
N + + + AGL+SL L L QI A L L HLDL
Sbjct: 366 LRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDL 417
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 6/211 (2%)
Query: 130 LINLVKLDLERC-TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
L +L L+L+R +I GL +GL L SL ++ N I+ GL N++ L++
Sbjct: 214 LPHLQFLELKRNRIKIVEGLT-FQGLDSLRSLKMQ-RNGISKLKDGAFFGLNNMEELELE 271
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
+ +T +L GL+ L L + + D+ L L+L+ QL+ F
Sbjct: 272 HNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAF 331
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG---DEGLVNLTGLCNLKCL 305
+ L+ LNLG N +T + L+NL++L+L + I ++ GL +L L
Sbjct: 332 VGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKL 391
Query: 306 ELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
L Q+ S + GL +LE ++L+ I
Sbjct: 392 ILQGNQIKSITKKAFIGLESLEHLDLNNNAI 422
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 126/305 (41%), Gaps = 35/305 (11%)
Query: 182 LKSLQISCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
L+ ++++ +++T+ I Y + +TLL+L + +L +L L+L+ +
Sbjct: 99 LQEVKMNYNELTE--IPYFGEPTSNITLLSLVHNIIPEINAQALQFYPALESLDLSSNII 156
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITD---ECLVHLKGLTNLESLNLDSCGIGDEGLVNLT 297
S+ F ++ LK LNL N IT C +L + LN + + + L
Sbjct: 157 SEIKTSSFPRM-QLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMSMIPPKIFKLP 215
Query: 298 GLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA 357
+L+ LEL ++ + + GLT GL SL+SL +
Sbjct: 216 ---HLQFLELKRNRI-----KIVEGLT-------------------FQGLDSLRSLKMQR 248
Query: 358 RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIK 417
I+ A L + L+L +T +L + L+ L + + +
Sbjct: 249 NGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWE 308
Query: 418 DLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 477
L+ L+LS N LT GL+ L LN+ ++R+T + L NL++L L
Sbjct: 309 FCQRLSELDLSYN-QLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLR 367
Query: 478 SCKVT 482
+ +++
Sbjct: 368 NNEIS 372
>sp|Q149C3|LIGO4_MOUSE Leucine-rich repeat and immunoglobulin-like domain containing-NOGO
receptor-interacting protein 4 OS=Mus musculus GN=Lingo4
PE=2 SV=2
Length = 593
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 126/290 (43%), Gaps = 15/290 (5%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP---VTAACLDSLSALGSLFY 232
LS L L+ L +S ++++ GLQ L L L+G V L+AL +L
Sbjct: 80 LSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTAL-TLLD 138
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG---IG 289
L LN+ L DG FS++GSL+ L +G N + GL L ++ L+ C +
Sbjct: 139 LRLNQIVLFLDGA--FSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNLSTVP 196
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL-SFTGISDGSLRKLAGLS 348
L L L L+ EL ++ + LR L L LE + S + GSL L
Sbjct: 197 GLALAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEALDPGSLVGL---- 252
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 408
+L SL + ++ AL L+ L LDL I+ A L L+ L + G L
Sbjct: 253 NLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGACL 312
Query: 409 TDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRIT 458
T L++ LL+++ N T + S LV+L +S + +T
Sbjct: 313 TSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSP-DKLVTLRLSGNPLT 361
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 15/242 (6%)
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
S++G L+ L+L +N+++ GL +L +L L + G +GL L L+L
Sbjct: 81 SRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLR 140
Query: 309 DTQVG---SSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 365
Q+ L L LE + ++ G+ AGL+ L ++ L+ ++
Sbjct: 141 LNQIVLFLDGAFSELGSLQQLEVGDNHLVFVAPGAF---AGLAKLSTITLERCNLSTVPG 197
Query: 366 AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLL 425
AL L L L L I A LR L+ LEI +A D SL L
Sbjct: 198 LALAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEA-----LDPGSLVGL 252
Query: 426 NLSQ----NCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 481
NLS CNL+ + + L+ L L++S + I++ R L PL L+ L L +
Sbjct: 253 NLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGACL 312
Query: 482 TA 483
T+
Sbjct: 313 TS 314
Score = 38.9 bits (89), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 95/255 (37%), Gaps = 33/255 (12%)
Query: 58 SLLSVDLSGSD--VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
SLL++ L G+ + G+ L L N + DG L L L
Sbjct: 109 SLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIVLFLDGAFSELGSLQQLEV----G 164
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+N + AFAGL L + LERC L + GL
Sbjct: 165 DNHLVFVAPGAFAGLAKLSTITLERCN-----LSTVPGLA-------------------- 199
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG-SLFYLN 234
L+ L L +L++ + L+GL +L L + P A LD S +G +L L
Sbjct: 200 LAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEA-LDPGSLVGLNLSSLA 258
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
+ RC LS + + L++L+L N I+ L L L+ L L +
Sbjct: 259 ITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAH 318
Query: 295 NLTGLCNLKCLELSD 309
GL L+++D
Sbjct: 319 AFHGLTAFHLLDVAD 333
>sp|Q8CDU4|FXL13_MOUSE F-box/LRR-repeat protein 13 OS=Mus musculus GN=Fbxl13 PE=2 SV=2
Length = 790
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 175/422 (41%), Gaps = 69/422 (16%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRN 116
++L ++ G D L + C NLQ L+ + C +D + H+ G + L+ N
Sbjct: 306 NVLRLNFRGCDFRTKTLKAVSHCKNLQELNVSDCQSFTDESMRHISEGCPGVLYLNL-SN 364
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
IT + M+ + L++L++ +C
Sbjct: 365 TTITNRTMRLLP-----------------------RYFHNLQNLSLAYCR---------- 391
Query: 177 SGLTNLKSLQISCSKVTDSGIAYL---KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K TD G+ YL G KL L+L GC T ++ + S+ +
Sbjct: 392 --------------KFTDKGLQYLNLGNGCHKLIYLDLSGC--TQVLVEKCPRISSVVLI 435
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL-KGLTNLESLNLDSC-GIGDE 291
+SD + S K+ G I+D C + + + + + C G+ D
Sbjct: 436 GSP--HISDSAFKALSSCDLKKIRFEGNKRISDACFKSIDRNYPGINHIYMVDCKGLTDS 493
Query: 292 GLVNLTGLCNLKCLELSD-TQVGSSGLRH-LSGLTNLESINLSFTGIS---DGSLRKLAG 346
L +L+ L L L L++ ++G GL+H G ++ L+ T S D S+ +L+
Sbjct: 494 SLKSLSLLKQLTVLNLTNCIRIGDIGLKHFFDGPASIRLRELNLTNCSLLGDSSVIRLSE 553
Query: 347 -LSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 404
+L LNL + +TD + + S+ L +DL G I++ G L + LR + +
Sbjct: 554 RCPNLHYLNLRNCEHLTDLAIEYIASMLSLISVDLSGTLISNEGMTILSRHRKLREVSVS 613
Query: 405 G-GGLTDAGVK-HIKDLSSLTLLNLSQNCNLTDKTLELISGL-TGLVSLNVSN-SRITSA 460
+TD G++ + K L L++S LTD ++ I+ T + SLN++ +IT A
Sbjct: 614 DCVNITDFGIRAYCKTSLLLEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCPKITDA 673
Query: 461 GL 462
G+
Sbjct: 674 GM 675
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 164/373 (43%), Gaps = 54/373 (14%)
Query: 149 VNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTL 208
+ K +M +N W I + + +K++ C T LQK L
Sbjct: 255 LTFKDMMACSRVNRSWMAMIQRGSLWNSIDFSTVKNIADKCVVTT---------LQKWRL 305
Query: 209 ----LNLEGCPVTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSK-IGSLKVLNLGFN 262
LN GC L ++S +L LN++ CQ +D+ S+ + LNL
Sbjct: 306 NVLRLNFRGCDFRTKTLKAVSHCKNLQELNVSDCQSFTDESMRHISEGCPGVLYLNLSNT 365
Query: 263 EITDECLVHL-KGLTNLESLNLDSC-GIGDEGLVNLT---GLCNLKCLELSD-TQVGSSG 316
IT+ + L + NL++L+L C D+GL L G L L+LS TQV
Sbjct: 366 TITNRTMRLLPRYFHNLQNLSLAYCRKFTDKGLQYLNLGNGCHKLIYLDLSGCTQVLVEK 425
Query: 317 LRHLSGLTNLESINLS---FTGISDGSLRKLA-------GLSSLKSLN-----------L 355
+S + + S ++S F +S L+K+ + KS++ +
Sbjct: 426 CPRISSVVLIGSPHISDSAFKALSSCDLKKIRFEGNKRISDACFKSIDRNYPGINHIYMV 485
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKN------LRSLEICGGGL 408
D + +TD+ L +L+ L LT L+L RI D G L++F + LR L + L
Sbjct: 486 DCKGLTDSSLKSLSLLKQLTVLNLTNCIRIGDIG---LKHFFDGPASIRLRELNLTNCSL 542
Query: 409 T-DAGVKHIKD-LSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLK 466
D+ V + + +L LNL +LTD +E I+ + L+S+++S + I++ G+ L
Sbjct: 543 LGDSSVIRLSERCPNLHYLNLRNCEHLTDLAIEYIASMLSLISVDLSGTLISNEGMTILS 602
Query: 467 PLKNLRSLTLESC 479
+ LR +++ C
Sbjct: 603 RHRKLREVSVSDC 615
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 115/258 (44%), Gaps = 52/258 (20%)
Query: 41 YPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLE 100
YPG+N +M VD G +TDS L L L L+ CI+I D GL+
Sbjct: 476 YPGINHIYM------------VDCKG--LTDSSLKSLSLLKQLTVLNLTNCIRIGDIGLK 521
Query: 101 H---------LRGL--------------------SNLTSLSFRRNNAITAQGMKAFAGLI 131
H LR L NL L+ R +T ++ A ++
Sbjct: 522 HFFDGPASIRLRELNLTNCSLLGDSSVIRLSERCPNLHYLNLRNCEHLTDLAIEYIASML 581
Query: 132 NLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT-NLKSLQIS-C 189
+L+ +DL + G+ L KL +++ C ITD ++ + L+ L +S C
Sbjct: 582 SLISVDLSGTLISNEGMTILSRHRKLREVSVSDCVNITDFGIRAYCKTSLLLEHLDVSYC 641
Query: 190 SKVTDSGIAYLKGL-QKLTLLNLEGCP-VTAACLDSLSA-LGSLFYLNLNRC-QLSDDGC 245
S++TD I + ++T LN+ GCP +T A ++ LSA L L+++ C QL+D
Sbjct: 642 SQLTDDIIKTIAIFCTRITSLNIAGCPKITDAGMEILSARCHYLHILDISGCIQLTDQII 701
Query: 246 EKFSKIG--SLKVLNLGF 261
+ +IG L++L + F
Sbjct: 702 QDL-QIGCKQLRILKMQF 718
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 49 MDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNL 108
++ IAS SL+SVDLSG+ +++ G+ L L+ + + C+ I+D G +R
Sbjct: 574 IEYIASM-LSLISVDLSGTLISNEGMTILSRHRKLREVSVSDCVNITDFG---IRAYCKT 629
Query: 109 TSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLM--KLESLNIKWCN 166
+ L L LD+ C+++ ++ + ++ SLNI C
Sbjct: 630 SLL---------------------LEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCP 668
Query: 167 CITDSDMKPLSGLTN-LKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGCP-VTAACLD 222
ITD+ M+ LS + L L IS C ++TD I L+ G ++L +L ++ C ++ A
Sbjct: 669 KITDAGMEILSARCHYLHILDISGCIQLTDQIIQDLQIGCKQLRILKMQFCKSISPAAAQ 728
Query: 223 SLSAL 227
+S++
Sbjct: 729 KMSSV 733
>sp|Q42371|ERECT_ARATH LRR receptor-like serine/threonine-protein kinase ERECTA
OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1
Length = 976
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 184/434 (42%), Gaps = 19/434 (4%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC-----IQISDGGLEHLRGLSNLTSLS 112
SLLS+DL G+ ++ + DCS+LQ+LD +F I S L+ L L
Sbjct: 93 SLLSIDLRGNRLSGQIPDEIGDCSSLQNLDLSFNELSGDIPFSISKLKQLEQL------- 145
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMK-LESLNIKWCNCITDS 171
+NN + + + NL LDL + ++ G + L + L+ L ++ N +
Sbjct: 146 ILKNNQLIGPIPSTLSQIPNLKILDLAQ-NKLSGEIPRLIYWNEVLQYLGLRGNNLV--G 202
Query: 172 DMKP-LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
++ P L LT L + + +T S + +L+L +T + L +
Sbjct: 203 NISPDLCQLTGLWYFDVRNNSLTGSIPETIGNCTAFQVLDLSYNQLTGEIPFDIGFL-QV 261
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L+L QLS + +L VL+L N ++ L LT E L L S +
Sbjct: 262 ATLSLQGNQLSGKIPSVIGLMQALAVLDLSGNLLSGSIPPILGNLTFTEKLYLHSNKLTG 321
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
L + L LEL+D + L LT+L +N++ + L+ ++L
Sbjct: 322 SIPPELGNMSKLHYLELNDNHLTGHIPPELGKLTDLFDLNVANNDLEGPIPDHLSSCTNL 381
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
SLN+ + + T A L +T+L+L I L NL +L++ +
Sbjct: 382 NSLNVHGNKFSGTIPRAFQKLESMTYLNLSSNNIKGPIPVELSRIGNLDTLDLSNNKING 441
Query: 411 AGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKN 470
+ DL L +NLS+N ++T L ++ +++SN+ I+ L L+N
Sbjct: 442 IIPSSLGDLEHLLKMNLSRN-HITGVVPGDFGNLRSIMEIDLSNNDISGPIPEELNQLQN 500
Query: 471 LRSLTLESCKVTAN 484
+ L LE+ +T N
Sbjct: 501 IILLRLENNNLTGN 514
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 127/312 (40%), Gaps = 26/312 (8%)
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
L+ L ++L G ++ D + SL L+L+ +LS D SK+ L+ L L N
Sbjct: 91 LKSLLSIDLRGNRLSGQIPDEIGDCSSLQNLDLSFNELSGDIPFSISKLKQLEQLILKNN 150
Query: 263 EITDECLVHLKGLTNLESLNLDSCGIGDE--------------GLV--NLTG-----LCN 301
++ L + NL+ L+L + E GL NL G LC
Sbjct: 151 QLIGPIPSTLSQIPNLKILDLAQNKLSGEIPRLIYWNEVLQYLGLRGNNLVGNISPDLCQ 210
Query: 302 LKCLELSDTQVGS---SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDAR 358
L L D + S S + T + ++LS+ ++ G + G + +L+L
Sbjct: 211 LTGLWYFDVRNNSLTGSIPETIGNCTAFQVLDLSYNQLT-GEIPFDIGFLQVATLSLQGN 269
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKD 418
Q++ + + + L LDL G ++ S L N L + LT + + +
Sbjct: 270 QLSGKIPSVIGLMQALAVLDLSGNLLSGSIPPILGNLTFTEKLYLHSNKLTGSIPPELGN 329
Query: 419 LSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 478
+S L L L+ N +LT + LT L LNV+N+ + HL NL SL +
Sbjct: 330 MSKLHYLELNDN-HLTGHIPPELGKLTDLFDLNVANNDLEGPIPDHLSSCTNLNSLNVHG 388
Query: 479 CKVTANDIKRLQ 490
K + + Q
Sbjct: 389 NKFSGTIPRAFQ 400
>sp|Q91ZZ5|RXFP2_MOUSE Relaxin receptor 2 OS=Mus musculus GN=Rxfp2 PE=2 SV=2
Length = 737
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 32/277 (11%)
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC 165
SN+T LS ++N I +K F+ L K+ L+
Sbjct: 120 SNVTLLSLKKNK-IHRLPVKVFSRYTELRKIYLQH------------------------- 153
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
NCIT + GL NL+ L +S + +T K L +L L L+ P+T S
Sbjct: 154 NCITHISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQKSFM 213
Query: 226 ALGSLFYLNL--NRCQ-LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
L SLF+L++ NR + L + C + ++ + + N G IT+ + LT L L
Sbjct: 214 GLNSLFFLSMVGNRLEALPETLCAQMPQLNWVDLANNGIKYITNSTFLTCDSLTVL-FLP 272
Query: 283 LDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
+ G E + L NL L+LS + + S L L+ +NLS +
Sbjct: 273 RNQIGFVPEK--TFSSLKNLGELDLSSNMITKLPVHLFSDLHLLQKLNLSSNPLLYVHKN 330
Query: 343 KLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
+ L L+SL+L+ +I + + L+H+ L
Sbjct: 331 QFGSLKQLQSLDLERIEIPNISTGMFQPMKNLSHIYL 367
Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 96/253 (37%), Gaps = 11/253 (4%)
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEG 292
L+L + ++ + FS+ L+ + L N IT GL NL+ L L I
Sbjct: 125 LSLKKNKIHRLPVKVFSRYTELRKIYLQHNCITHISRRAFLGLHNLQILYLSHNCITSLR 184
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
L L L L D + + GL +L F + L L +
Sbjct: 185 PGIFKDLHQLAWLILDDNPITRISQKSFMGLNSL-----FFLSMVGNRLEALPETLCAQM 239
Query: 353 LNLDARQITDTGLAALTSLT-----GLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGG 407
L+ + + G+ +T+ T LT L L +I + KNL L++
Sbjct: 240 PQLNWVDLANNGIKYITNSTFLTCDSLTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNM 299
Query: 408 LTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKP 467
+T V DL L LNLS N L + L L SL++ I + +P
Sbjct: 300 ITKLPVHLFSDLHLLQKLNLSSNPLLYVHKNQF-GSLKQLQSLDLERIEIPNISTGMFQP 358
Query: 468 LKNLRSLTLESCK 480
+KNL + L++ +
Sbjct: 359 MKNLSHIYLKTFR 371
>sp|Q8LB33|FB330_ARATH F-box protein At3g58530 OS=Arabidopsis thaliana GN=At3g58530 PE=2
SV=1
Length = 353
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 32/247 (12%)
Query: 216 VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKI-GSLKVLNLGFN-EITDECLVHL 272
V C D AL SL +LNLN CQ +SD+G E + I LKV ++ +N +TD + +L
Sbjct: 102 VKTECPD---ALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDAGIRNL 158
Query: 273 -KGLTNLESLNLDSCG--------IGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGL 323
K ++ LNL C + E +L L +C++++D + L+ L
Sbjct: 159 VKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGL----LQVLQKC 214
Query: 324 TNLESINL-SFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDL-F 380
+L+++NL + +G +D + K++ L+ L+ L++ A+ I+D G+ + L L+L +
Sbjct: 215 FSLQTLNLYALSGFTDKAYMKISLLADLRFLDICGAQNISDEGIGHIAKCNKLESLNLTW 274
Query: 381 GARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLEL 440
RITD+G + N + SLE L+ G+ + D L LSQ C+ T TL+
Sbjct: 275 CVRITDAGVNTIAN--SCTSLEF----LSLFGIVGVTDRC---LETLSQTCSTTLTTLD- 324
Query: 441 ISGLTGL 447
++G TG+
Sbjct: 325 VNGCTGI 331
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 248 FSKIGSLKVLNLGFNE-ITDECLVHLK--------GLTNLESLNLDSC-GIGDEGLVNLT 297
+ +K +NL F + + D HLK L +LE LNL+ C I D G+ +T
Sbjct: 77 LPRYRQVKHINLEFAQGVVDS---HLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAIT 133
Query: 298 GLC-NLKCLELS-DTQVGSSGLRHL-SGLTNLESINLS-FTGISDGSLRKLA-GLSSLKS 352
+C LK + + +V +G+R+L ++ +NLS ++D S++ +A L+S
Sbjct: 134 SICPKLKVFSIYWNVRVTDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLES 193
Query: 353 LNLD-ARQITDTGL-AALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEICGG-GL 408
LN+ +ITD GL L L L+L+ + TD + +LR L+ICG +
Sbjct: 194 LNITRCVKITDDGLLQVLQKCFSLQTLNLYALSGFTDKAYMKISLLADLRFLDICGAQNI 253
Query: 409 TDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELIS 442
+D G+ HI + L LNL+ +TD + I+
Sbjct: 254 SDEGIGHIAKCNKLESLNLTWCVRITDAGVNTIA 287
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 105/243 (43%), Gaps = 57/243 (23%)
Query: 69 VTDSGLIHLK-DCSN----LQSLDFNFCIQISDGGLEHLRGL-SNLTSLSFRRNNAITAQ 122
V DS L +K +C + L+ L+ N C +ISD G+E + + L S N +T
Sbjct: 94 VVDSHLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDA 153
Query: 123 GMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS-GLTN 181
G++ NLVK C I LN+ C +TD M+ ++ +
Sbjct: 154 GIR------NLVK----NCRHI-------------TDLNLSGCKSLTDKSMQLVAESYPD 190
Query: 182 LKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ- 239
L+SL I+ C K+TD G+ L+ LQK C SL LNL
Sbjct: 191 LESLNITRCVKITDDGL--LQVLQK--------------CF-------SLQTLNLYALSG 227
Query: 240 LSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT 297
+D K S + L+ L++ G I+DE + H+ LESLNL C I D G+ +
Sbjct: 228 FTDKAYMKISLLADLRFLDICGAQNISDEGIGHIAKCNKLESLNLTWCVRITDAGVNTIA 287
Query: 298 GLC 300
C
Sbjct: 288 NSC 290
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 88/167 (52%), Gaps = 37/167 (22%)
Query: 311 QVGSSGLRHLSGLT-----NLESINLSFT-GISDGSLRKLA-----GLSSLKSLNLDA-R 358
++ ++G R L+ L+ ++ INL F G+ D L+ + L SL+ LNL+ +
Sbjct: 63 EMTNAGDRLLAALSLPRYRQVKHINLEFAQGVVDSHLKLVKTECPDALLSLEWLNLNVCQ 122
Query: 359 QITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKH-IK 417
+I+D G+ A+TS+ L +F + N+R +TDAG+++ +K
Sbjct: 123 KISDNGIEAITSICP--KLKVFSI------------YWNVR--------VTDAGIRNLVK 160
Query: 418 DLSSLTLLNLSQNCNLTDKTLELIS-GLTGLVSLNVSNS-RITSAGL 462
+ +T LNLS +LTDK+++L++ L SLN++ +IT GL
Sbjct: 161 NCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGL 207
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 25 LEAFRDC-ALQDLCLGQYPGVNDK-WMDVIASQGSSLLSVDLSGS-DVTDSGLIHLKDCS 81
L+ + C +LQ L L G DK +M + S + L +D+ G+ +++D G+ H+ C+
Sbjct: 208 LQVLQKCFSLQTLNLYALSGFTDKAYMKI--SLLADLRFLDICGAQNISDEGIGHIAKCN 265
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
L+SL+ +C++I+D G+ + ++ TSL F
Sbjct: 266 KLESLNLTWCVRITDAGVNTIA--NSCTSLEF 295
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 26/162 (16%)
Query: 81 SNLQSLDFNFCIQISDGGL-EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE 139
+L+SL+ C++I+D GL + L+ +L +L+ + T + + L +L LD+
Sbjct: 189 PDLESLNITRCVKITDDGLLQVLQKCFSLQTLNLYALSGFTDKAYMKISLLADLRFLDIC 248
Query: 140 RCTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIA 198
I G+ ++ KLESLN+ WC ITD+ + ++ SC+
Sbjct: 249 GAQNISDEGIGHIAKCNKLESLNLTWCVRITDAGVNTIAN---------SCT-------- 291
Query: 199 YLKGLQKLTLLNLEGCPVTAACLDSLSALGS--LFYLNLNRC 238
L+ L+L + G VT CL++LS S L L++N C
Sbjct: 292 ---SLEFLSLFGIVG--VTDRCLETLSQTCSTTLTTLDVNGC 328
>sp|Q6UY18|LIGO4_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 4 OS=Homo sapiens GN=LINGO4
PE=2 SV=1
Length = 593
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 126/290 (43%), Gaps = 15/290 (5%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT---AACLDSLSALGSLFY 232
LS L+ L+ L +S ++++ GLQ L L L+G + LSAL +L
Sbjct: 80 LSRLSLLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSAL-TLLD 138
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG---IG 289
L LN+ L DG F ++GSL+ L +G N + GL L +L L+ C +
Sbjct: 139 LRLNQIVLFLDGA--FGELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVP 196
Query: 290 DEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLE-SINLSFTGISDGSLRKLAGLS 348
L L L L+ EL ++ + LR L L LE + S + GSL L
Sbjct: 197 GLALARLPALVALRLRELDIGRLPAGALRGLGQLKELEIHLWPSLEALDPGSLVGL---- 252
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGL 408
+L SL + ++ AL L+ L LDL I+ A L L+ L + G L
Sbjct: 253 NLSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLSGACL 312
Query: 409 TDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRIT 458
T L++ LL+++ N T + S LV+L +S + +T
Sbjct: 313 TSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSP-DKLVTLRLSGNPLT 361
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
S++ L+ L+L +N+++ GL +L +L L + G +GL L L+L
Sbjct: 81 SRLSLLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLR 140
Query: 309 DTQV-----GSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 363
Q+ G+ G L L LE + ++ G+ AGL+ L +L L+ ++
Sbjct: 141 LNQIVLFLDGAFG--ELGSLQKLEVGDNHLVFVAPGAF---AGLAKLSTLTLERCNLSTV 195
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLT 423
AL L L L L I A LR L+ LEI +A D SL
Sbjct: 196 PGLALARLPALVALRLRELDIGRLPAGALRGLGQLKELEIHLWPSLEA-----LDPGSLV 250
Query: 424 LLNLSQ----NCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 479
LNLS CNL+ + + L+ L L++S + I++ R L PL L+ L L
Sbjct: 251 GLNLSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLSGA 310
Query: 480 KVTA 483
+T+
Sbjct: 311 CLTS 314
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 96/255 (37%), Gaps = 33/255 (12%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDF--NFCIQISDGGLEHLRGLSNLTSLSFRR 115
SLL++ L G+ + G S L LD N + DG L L L
Sbjct: 109 SLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIVLFLDGAFGELGSLQKLEV----G 164
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+N + AFAGL L L LERC L + GL
Sbjct: 165 DNHLVFVAPGAFAGLAKLSTLTLERCN-----LSTVPGLA-------------------- 199
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG-SLFYLN 234
L+ L L +L++ + L+GL +L L + P A LD S +G +L L
Sbjct: 200 LARLPALVALRLRELDIGRLPAGALRGLGQLKELEIHLWPSLEA-LDPGSLVGLNLSSLA 258
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV 294
+ RC LS + + L+VL+L N I+ L L L+ L L +
Sbjct: 259 ITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAH 318
Query: 295 NLTGLCNLKCLELSD 309
GL L+++D
Sbjct: 319 AFHGLTAFHLLDVAD 333
>sp|P35858|ALS_HUMAN Insulin-like growth factor-binding protein complex acid labile
subunit OS=Homo sapiens GN=IGFALS PE=1 SV=1
Length = 605
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 160/405 (39%), Gaps = 31/405 (7%)
Query: 100 EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKL 157
+ L GL NL L RN + + + FA L L L R +R+ GL +GL L
Sbjct: 116 QALLGLENLCHLHLERNQ-LRSLALGTFAHTPALASLGLSNNRLSRLEDGL--FEGLGSL 172
Query: 158 ESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVT 217
LN+ W + D GL +L+ L ++ +++ A GL +L L+L +
Sbjct: 173 WDLNLGWNSLAVLPDAA-FRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALR 231
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI------------- 264
A + L L L L+R ++ F + +L+ L+L N +
Sbjct: 232 AIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLG 291
Query: 265 ------TDECLVHL-----KGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVG 313
+ + L K L LE L L I + GL L+ L L Q+
Sbjct: 292 LRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQ 351
Query: 314 SSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 373
GLTN+ +NLS + + + GL L SL+L+ + T L+G
Sbjct: 352 EVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSG 411
Query: 374 LTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNL 433
L L L + L L L++ LT + + L L L LS+N L
Sbjct: 412 LRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRN-RL 470
Query: 434 TDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 478
+ + + L L+VS++R+ + L PL LR L+L +
Sbjct: 471 AELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRN 515
>sp|Q9Z1P4|LGR5_MOUSE Leucine-rich repeat-containing G-protein coupled receptor 5 OS=Mus
musculus GN=Lgr5 PE=2 SV=2
Length = 907
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 136/318 (42%), Gaps = 7/318 (2%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N +T +GL +LK L + +++ L+ L+ L L L+ ++ S
Sbjct: 100 NALTHIPKGAFTGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFS 159
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
L SL +L L+ L+D + F + +L+ + L N+I L++L L+L +
Sbjct: 160 GLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSSLVVLHLHN 219
Query: 286 CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA 345
I G GL +L+ L+L+ + + L+NL+ + I R
Sbjct: 220 NRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTA-IKTLSNLKELGFHSNNIRSIPERAFV 278
Query: 346 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEIC 404
G SL +++ I G++A L L L L GA IT+ +L L SL +
Sbjct: 279 GNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLNGASHITE--FPHLTGTATLESLTLT 336
Query: 405 GGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRH 464
G ++ L +L +L+LS N L D L +SG L +++ ++ I
Sbjct: 337 GAKISSLPQAVCDQLPNLQVLDLSYNL-LED--LPSLSGCQKLQKIDLRHNEIYEIKGST 393
Query: 465 LKPLKNLRSLTLESCKVT 482
+ L NLRSL L K+
Sbjct: 394 FQQLFNLRSLNLAWNKIA 411
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 153/378 (40%), Gaps = 36/378 (9%)
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
NA+T AF GL +L L L+ L+ L L+SL + N I+
Sbjct: 100 NALTHIPKGAFTGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLD-ANHISYVPPSCF 158
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
SGL +L+ L + + +TD + + L L + L + + L SL L+L+
Sbjct: 159 SGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSSLVVLHLH 218
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
++ G + F + SL+ L+L +N + DE +K L+NL+ L S I
Sbjct: 219 NNRIHSLGKKCFDGLHSLETLDLNYNNL-DEFPTAIKTLSNLKELGFHSNNIRSIPERAF 277
Query: 297 TGLCNLKCLELSDTQ---VGSSGLRHL--------------------SGLTNLESINLSF 333
G +L + D VG S +HL +G LES+ L+
Sbjct: 278 VGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLNGASHITEFPHLTGTATLESLTLTG 337
Query: 334 TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLR 393
IS L +L+ L+L + D L +L+ L +DL I + + +
Sbjct: 338 AKISSLPQAVCDQLPNLQVLDLSYNLLED--LPSLSGCQKLQKIDLRHNEIYEIKGSTFQ 395
Query: 394 NFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVS 453
NLRSL + + + H S+L L + + + + ++GL GL L ++
Sbjct: 396 QLFNLRSLNLAWNKI---AIIHPNAFSTLPSL-IKLDLSSNLLSSFPVTGLHGLTHLKLT 451
Query: 454 NSR-----ITSAGLRHLK 466
+R I SA LK
Sbjct: 452 GNRALQSLIPSANFPELK 469
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 122/333 (36%), Gaps = 56/333 (16%)
Query: 94 ISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG-GLVNLK 152
++D ++ R LS L +++ N I AF L +LV L L RIH G
Sbjct: 174 LTDVPVQAFRSLSALQAMTLALNK-IHHIADYAFGNLSSLVVLHLHN-NRIHSLGKKCFD 231
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
GL LE+L++ + N D + L+NLK L + + G L ++
Sbjct: 232 GLHSLETLDLNYNN--LDEFPTAIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFY 289
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVH 271
P+ G F + L+ L L G + IT+ H
Sbjct: 290 DNPIQFV------------------------GVSAFQHLPELRTLTLNGASHITE--FPH 323
Query: 272 LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL 331
L G LESL L I L NL+ L+LS + L LSG L+ I+L
Sbjct: 324 LTGTATLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYNLL--EDLPSLSGCQKLQKIDL 381
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL---------------------TS 370
I + L +L+SLNL +I A T
Sbjct: 382 RHNEIYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPVTG 441
Query: 371 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
L GLTHL L G R S NF L+ +E+
Sbjct: 442 LHGLTHLKLTGNRALQSLIPS-ANFPELKIIEM 473
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 97/243 (39%), Gaps = 24/243 (9%)
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
L+L N I+ L L LE L L + TGL +LK L L + Q+
Sbjct: 71 LDLSMNNISQLPASLLHRLCFLEELRLAGNALTHIPKGAFTGLHSLKVLMLQNNQLRQVP 130
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
L L +L+S+ L IS +GL SL+ L LD +TD + A SL+ L
Sbjct: 131 EEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQA 190
Query: 377 LDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTD- 435
+ L +I N +L L + + G K L SL L+L+ N NL +
Sbjct: 191 MTLALNKIHHIADYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYN-NLDEF 249
Query: 436 ----KTL------------------ELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRS 473
KTL G L++++ ++ I G+ + L LR+
Sbjct: 250 PTAIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGVSAFQHLPELRT 309
Query: 474 LTL 476
LTL
Sbjct: 310 LTL 312
>sp|Q9FL28|FLS2_ARATH LRR receptor-like serine/threonine-protein kinase FLS2
OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1
Length = 1173
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 1/300 (0%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
++ LT L+ L ++ + T A + L +L L L + + + L ++FYL+L
Sbjct: 92 IANLTYLQVLDLTSNSFTGKIPAEIGKLTELNQLILYLNYFSGSIPSGIWELKNIFYLDL 151
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
LS D E+ K SL ++ +N +T + L L +L+ + V+
Sbjct: 152 RNNLLSGDVPEEICKTSSLVLIGFDYNNLTGKIPECLGDLVHLQMFVAAGNHLTGSIPVS 211
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL 355
+ L NL L+LS Q+ R L NL+S+ L+ + ++ SSL L L
Sbjct: 212 IGTLANLTDLDLSGNQLTGKIPRDFGNLLNLQSLVLTENLLEGDIPAEIGNCSSLVQLEL 271
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKH 415
Q+T A L +L L L ++ ++T S + L L L + L +
Sbjct: 272 YDNQLTGKIPAELGNLVQLQALRIYKNKLTSSIPSSLFRLTQLTHLGLSENHLVGPISEE 331
Query: 416 IKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 475
I L SL +L L N N T + + I+ L L L V + I+ L L NLR+L+
Sbjct: 332 IGFLESLEVLTLHSN-NFTGEFPQSITNLRNLTVLTVGFNNISGELPADLGLLTNLRNLS 390
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 175/402 (43%), Gaps = 24/402 (5%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT---RIHGGLVNLKGLMKLESLN 161
L+NLT L N +T + + F L+NL L L I + N L++LE
Sbjct: 215 LANLTDLDLS-GNQLTGKIPRDFGNLLNLQSLVLTENLLEGDIPAEIGNCSSLVQLE--- 270
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 221
+ N +T L L L++L+I +K+T S + L L +LT L L +
Sbjct: 271 -LYDNQLTGKIPAELGNLVQLQALRIYKNKLTSSIPSSLFRLTQLTHLGLSENHLVGPIS 329
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
+ + L SL L L+ + + + + + +L VL +GFN I+ E L LTNL +L
Sbjct: 330 EEIGFLESLEVLTLHSNNFTGEFPQSITNLRNLTVLTVGFNNISGELPADLGLLTNLRNL 389
Query: 282 NLDS---CGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL---SFTG 335
+ G + N TG LK L+LS Q+ R G NL I++ FTG
Sbjct: 390 SAHDNLLTGPIPSSISNCTG---LKLLDLSHNQMTGEIPRGF-GRMNLTFISIGRNHFTG 445
Query: 336 -ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
I D + S+L++L++ +T T + L L L + +T + N
Sbjct: 446 EIPD----DIFNCSNLETLSVADNNLTGTLKPLIGKLQKLRILQVSYNSLTGPIPREIGN 501
Query: 395 FKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSN 454
K+L L + G T + + +L+ L L + N +L E + + L L++SN
Sbjct: 502 LKDLNILYLHSNGFTGRIPREMSNLTLLQGLRMYSN-DLEGPIPEEMFDMKLLSVLDLSN 560
Query: 455 SRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPN 496
++ + L++L L+L+ K + L+S L N
Sbjct: 561 NKFSGQIPALFSKLESLTYLSLQGNKFNGSIPASLKSLSLLN 602
>sp|Q9D1T0|LIGO1_MOUSE Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Mus musculus GN=Lingo1
PE=1 SV=1
Length = 614
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 112/269 (41%), Gaps = 13/269 (4%)
Query: 117 NAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N ++A AF L NL L L R I G+ GL L L+I + D
Sbjct: 99 NIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGV--FTGLSNLTKLDISENKIVILLDYM 156
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L NLKSL++ + + GL L L LE C +T+ ++LS L L L
Sbjct: 157 -FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 215
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L ++ F ++ LKVL + + +T CL L NL SL++ C +
Sbjct: 216 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL----NLTSLSITHCNLTA 271
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ + L L+ L LS +G+ L L L+ I L ++ GL+ L
Sbjct: 272 VPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYL 331
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDL 379
+ LN+ Q+T +A S+ L L L
Sbjct: 332 RVLNVSGNQLTTLEESAFHSVGNLETLIL 360
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
+ L+L ++ + + +LE + L+ +S L +L++L L + ++
Sbjct: 68 RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL 127
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 422
L T L+ LT LD+ +I ++ NL+SLE+ L + L+SL
Sbjct: 128 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSL 187
Query: 423 TLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 476
L L + CNLT E +S L GL+ L + + I + K L L+ L +
Sbjct: 188 EQLTL-EKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEI 240
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 99/257 (38%), Gaps = 48/257 (18%)
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
D ++ L L LN +S F+ + +L+ L L N + L GL+NL L
Sbjct: 83 DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKL 142
Query: 282 -------------------NLDSCGIGDEGLVNLT-----GLCNLKCLELSD---TQVGS 314
NL S +GD LV ++ GL +L+ L L T + +
Sbjct: 143 DISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 202
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK----------------SLNLDAR 358
L HL GL L +L+ I D S ++L L L+ LNL +
Sbjct: 203 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSL 262
Query: 359 QITDTGLAALT-----SLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGV 413
IT L A+ L L L+L I + L L+ +++ GG L
Sbjct: 263 SITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEP 322
Query: 414 KHIKDLSSLTLLNLSQN 430
+ L+ L +LN+S N
Sbjct: 323 YAFRGLNYLRVLNVSGN 339
>sp|Q5UQA7|YR542_MIMIV Putative F-box/LRR-repeat protein R542 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_R542 PE=4 SV=1
Length = 558
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 150/364 (41%), Gaps = 80/364 (21%)
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN---LKGLMKLESLNI 162
N S SF N +K + RC + +N LK L + SLNI
Sbjct: 42 QNPKSFSFNLKNCNPKDSIKYLQSV---------RCLNLSKSTINDDQLKYLSDVYSLNI 92
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCS-KVTDSGIAYLKGLQKLTLLNLEGC-PVTAAC 220
C ITD + LS LT + L +S + +TD+G LK Q++ +NL C +T
Sbjct: 93 SNCKSITD---RGLSFLTQVVKLNVSYNGNITDNG---LKNFQRIKKINLCFCGKITDKG 146
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLK------ 273
+++L +L SD+ + I +++ +NL IT +CL HL+
Sbjct: 147 IENLVYGKTLN---------SDEPIP--TVINTIRKINLQCCMRITSKCLQHLRRARSIN 195
Query: 274 -------------GLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHL 320
+ N+E+L +D + D+ L NL + + + HL
Sbjct: 196 MLYGPQTYNEDLQYIPNIETLKIDGLDVSDKNLTNLKYVKYI----FFGRNYPVIFMSHL 251
Query: 321 SGLTNL---------ESINLS---------FTGISDGSLRKLAGLSSLKSLNL-DARQIT 361
LT L E I+ + +G + +L GLS ++ LNL + IT
Sbjct: 252 DKLTKLILPNVPEHIEYIDFNKMPNLVKADLSGCINLLDEQLKGLSKVRKLNLKECYDIT 311
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG-GLTDAGVKHIKDLS 420
D GL+ LT + + F RITDSG YL N + ICG +T+ G ++K +
Sbjct: 312 DVGLSYLTMVKKINISYCF--RITDSGLKYL---SNADYVNICGCLKITNEGFFYLKKVP 366
Query: 421 SLTL 424
L +
Sbjct: 367 KLVV 370
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 127/287 (44%), Gaps = 49/287 (17%)
Query: 127 FAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQ 186
F + NLVK DL C + LKGL K+ LN+K C ITD LS LT +K +
Sbjct: 271 FNKMPNLVKADLSGCINLLDE--QLKGLSKVRKLNLKECYDITDVG---LSYLTMVKKIN 325
Query: 187 IS-CSKVTDSGIAYLKGLQKLTLLNLEGC-PVTAACLDSLSALGSLFY----LNLNRCQL 240
IS C ++TDSG+ YL +N+ GC +T L + L L+L C +
Sbjct: 326 ISYCFRITDSGLKYLSNAD---YVNICGCLKITNEGFFYLKKVPKLVVGYTTLSLYDCMI 382
Query: 241 SDDGCEKFSKI---GSLKVLNLG----FNEITDECL---------VHLKGLTNLESL--- 281
DGC + + + K L G + E T + V LK TNL +L
Sbjct: 383 --DGCGDYEYLTISDNTKQLITGKAFHYLENTSQIKIINCNNIIDVDLKSFTNLPTLSKI 440
Query: 282 NLDSC-GIGDEGLVNLTGLCNLKCLELSDT-QVGSSGLRHLSGLTNLESINLSFTGISDG 339
+L C I ++G L+ LCN+ +++S+ Q+ S G +S LTN + I++ S
Sbjct: 441 DLRYCNNITNQG---LSALCNIPIVKISNNYQISSKG---ISYLTNSKKISIE----SCP 490
Query: 340 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
+ L+ LK L + + + + +L H+D D
Sbjct: 491 KINSFPNLTGLKKLVF--KTMGKINMQLIQNLNEYYHIDTIHVYYRD 535
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 189/431 (43%), Gaps = 64/431 (14%)
Query: 60 LSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAI 119
L+V +G ++TD+GL K+ ++ ++ FC +I+D G+E+L L S
Sbjct: 112 LNVSYNG-NITDNGL---KNFQRIKKINLCFCGKITDKGIENLVYGKTLNS--------- 158
Query: 120 TAQGMKAFAGLINLV-KLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
+ +IN + K++L+ C RI L+ L + S+N+ + + D L
Sbjct: 159 ----DEPIPTVINTIRKINLQCCMRITSKC--LQHLRRARSINMLYGPQTYNED---LQY 209
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+ N+++L+I V+D + LK ++ + G + L L L N+
Sbjct: 210 IPNIETLKIDGLDVSDKNLTNLKYVKYIFF----GRNYPVIFMSHLDKLTKLILPNVPEH 265
Query: 239 QLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNL 296
D F+K+ +L +L G + DE LKGL+ + LNL C I D GL L
Sbjct: 266 IEYID----FNKMPNLVKADLSGCINLLDE---QLKGLSKVRKLNLKECYDITDVGLSYL 318
Query: 297 TGLCNLK---CLELSDTQVGSSGLRHLSGLTNLESIN----LSFTGISDGSLRKLAGLSS 349
T + + C ++D SGL++LS N + +N L T L+K+ L
Sbjct: 319 TMVKKINISYCFRITD-----SGLKYLS---NADYVNICGCLKITNEGFFYLKKVPKL-- 368
Query: 350 LKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLT 409
+ + D + LT D IT YL N + I +
Sbjct: 369 --VVGYTTLSLYDCMIDGCGDYEYLTISDNTKQLITGKAFHYLENTS--QIKIINCNNII 424
Query: 410 DAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNS-RITSAGLRHLKPL 468
D +K +L +L+ ++L N+T++ L S L + + +SN+ +I+S G+ + L
Sbjct: 425 DVDLKSFTNLPTLSKIDLRYCNNITNQGL---SALCNIPIVKISNNYQISSKGISY---L 478
Query: 469 KNLRSLTLESC 479
N + +++ESC
Sbjct: 479 TNSKKISIESC 489
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 124/294 (42%), Gaps = 61/294 (20%)
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV-------------------LNLGFN 262
DS+ L S+ LNL++ ++DD + S + SL + LN+ +N
Sbjct: 58 DSIKYLQSVRCLNLSKSTINDDQLKYLSDVYSLNISNCKSITDRGLSFLTQVVKLNVSYN 117
Query: 263 -EITDECLVHLKGLTNLESLNLDSCG-IGDEGLVNLTGLCNLKCLELSDT---------- 310
ITD LK ++ +NL CG I D+G+ NL L E T
Sbjct: 118 GNITDN---GLKNFQRIKKINLCFCGKITDKGIENLVYGKTLNSDEPIPTVINTIRKINL 174
Query: 311 ----QVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 366
++ S L+HL SIN+ + + L + ++++L +D ++D L
Sbjct: 175 QCCMRITSKCLQHLR---RARSINMLYGPQTYN--EDLQYIPNIETLKIDGLDVSDKNLT 229
Query: 367 AL-----------TSLTGLTHLDLFGARITDSGAAYLR--NFKNLRSLEICG-GGLTDAG 412
L + ++HLD I + ++ +F + +L G +
Sbjct: 230 NLKYVKYIFFGRNYPVIFMSHLDKLTKLILPNVPEHIEYIDFNKMPNLVKADLSGCINLL 289
Query: 413 VKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSN-SRITSAGLRHL 465
+ +K LS + LNL + ++TD L S LT + +N+S RIT +GL++L
Sbjct: 290 DEQLKGLSKVRKLNLKECYDITDVGL---SYLTMVKKINISYCFRITDSGLKYL 340
>sp|Q9SKK0|EBF1_ARATH EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1
SV=1
Length = 628
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 202/456 (44%), Gaps = 78/456 (17%)
Query: 67 SDVTDSGLIHL-KDCSNLQSLDFNFCIQISDGGL-EHLRGLSNLTSLSFRRNNAITAQGM 124
+ V+D GL + + C +L SL I+D GL E G + L L R + IT +G+
Sbjct: 162 AKVSDLGLRSIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGL 221
Query: 125 KAFA-GLINLVKLDLERCTRI--HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN 181
A A NL +L LE C+RI G L + KL+S++IK C + D + L L+N
Sbjct: 222 VAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQGIASL--LSN 279
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
T +A LK LQ L + ++ SL+ +G + L+ L
Sbjct: 280 -----------TTCSLAKLK-LQMLNVTDV-----------SLAVVG---HYGLSITDLV 313
Query: 242 DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNL-TGL 299
G S+ G V+ G GL L SL + +C G+ D GL ++ G
Sbjct: 314 LAGLSHVSEKG-FWVMGNGV------------GLQKLNSLTITACQGVTDMGLESVGKGC 360
Query: 300 CNLKCLELSDTQVGS-SGLRHLSGLT-NLESINLS---------FTGISDGSLRKLAGLS 348
N+K +S + + S +GL + + +LES+ L F G KL S
Sbjct: 361 PNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEECHRVTQFGFFGSLLNCGEKLKAFS 420
Query: 349 SLKSLNLDARQITDTGLAALTSLTGLTHLDL-----FGARITDSGAAYLRNF-KNLRSLE 402
+ L++ R +T TGL A + + L L + FG D+ A + L ++
Sbjct: 421 LVNCLSI--RDLT-TGLPASSHCSALRSLSIRNCPGFG----DANLAAIGKLCPQLEDID 473
Query: 403 ICG-GGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTG--LVSLNVSN-SRIT 458
+CG G+T++G H+ SSL +N S NLTD+ + I+ G L LN+ S IT
Sbjct: 474 LCGLKGITESGFLHLIQ-SSLVKINFSGCSNLTDRVISAITARNGWTLEVLNIDGCSNIT 532
Query: 459 SAGLRHLKP-LKNLRSLTLESCKVTANDIKRLQSRD 493
A L + + L L + C ++ + I+ L S D
Sbjct: 533 DASLVSIAANCQILSDLDISKCAISDSGIQALASSD 568
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 198/452 (43%), Gaps = 99/452 (21%)
Query: 67 SDVTDSGLIHLKD-CSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGM 124
S +TD+GL+ + + C+ L+ L+ N C I+D GL + + NLT L+ + I +G+
Sbjct: 188 STITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEACSRIGDEGL 247
Query: 125 KAFA--------------------GLINL----------VKLDLERCTRI------HGGL 148
A A G+ +L +KL + T + H GL
Sbjct: 248 LAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTTCSLAKLKLQMLNVTDVSLAVVGHYGL 307
Query: 149 ------------VNLKG---------LMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQ 186
V+ KG L KL SL I C +TD ++ + G N+K
Sbjct: 308 SITDLVLAGLSHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDMGLESVGKGCPNMKKAI 367
Query: 187 ISCSK-VTDSG-IAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDG 244
IS S ++D+G +++ K L L LE C ++ G F+ +L C +
Sbjct: 368 ISKSPLLSDNGLVSFAKASLSLESLQLEEC-------HRVTQFG--FFGSLLNC---GEK 415
Query: 245 CEKFSKIGSLKVLNLGFN-EITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTGLC-N 301
+ FS + L + +L + C + L SL++ +C G GD L + LC
Sbjct: 416 LKAFSLVNCLSIRDLTTGLPASSHC-------SALRSLSIRNCPGFGDANLAAIGKLCPQ 468
Query: 302 LKCLELSDTQ-VGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSS-----LKSLNL 355
L+ ++L + + SG H L + ++F+G S+ + R ++ +++ L+ LN+
Sbjct: 469 LEDIDLCGLKGITESGFLH---LIQSSLVKINFSGCSNLTDRVISAITARNGWTLEVLNI 525
Query: 356 DA-RQITDTGLAALTS-LTGLTHLDLFGARITDSGAAYLRNFKNLR--SLEICGGGL-TD 410
D ITD L ++ + L+ LD+ I+DSG L + L+ L + G + TD
Sbjct: 526 DGCSNITDASLVSIAANCQILSDLDISKCAISDSGIQALASSDKLKLQILSVAGCSMVTD 585
Query: 411 AGVKHIKDLSSLTL-LNLSQNCNLTDKTLELI 441
+ I L S L LNL Q ++++ T++ +
Sbjct: 586 KSLPAIVGLGSTLLGLNLQQCRSISNSTVDFL 617
>sp|Q5TJ59|TLR3_BOVIN Toll-like receptor 3 OS=Bos taurus GN=TLR3 PE=2 SV=1
Length = 904
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 137/337 (40%), Gaps = 47/337 (13%)
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
G + L +L LS NN I ++F GL NL +LDL R ++L L K+
Sbjct: 291 GNDSFAWLPHLEYLSLEYNN-IEHLSSRSFYGLSNLRRLDLRRSFTRQS--ISLTSLPKI 347
Query: 158 ESLNIKWCNCITDSDM----------KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
+ + +W C+ +M +GL LK L +S S + L+ L T
Sbjct: 348 DDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSS------LRTLTNET 401
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L+L GCP L L+L + ++S FS +G L+VL+LG NEI E
Sbjct: 402 FLSLAGCP--------------LLLLDLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQE 447
Query: 268 CL-VHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCL-----ELSDTQVGSSGLRHLS 321
+GL N+ + L + + T + +L+ L L + S R L
Sbjct: 448 LTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLP 507
Query: 322 GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAA-----LTSLTGLTH 376
L L+ N + I+D L+ GL L+ L+L + A + L GL H
Sbjct: 508 NLVILDLSNNNIANINDELLK---GLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFH 564
Query: 377 LDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGV 413
L + + FK+LR L+ G+ + +
Sbjct: 565 LHILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNLNI 601
>sp|Q3URE9|LIGO2_MOUSE Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 2 OS=Mus musculus GN=Lingo2
PE=2 SV=1
Length = 606
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 108/273 (39%), Gaps = 40/273 (14%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N I + + + L NL+SL++ +++ + GL LT L++ + LD +
Sbjct: 91 NIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKI-VILLDYM- 148
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
F + +LK L +G N++ GL +LE L L+
Sbjct: 149 ----------------------FQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEK 186
Query: 286 C---GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
C + E L +L L L L+ + + L L NLE I L
Sbjct: 187 CNLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLE--------IDYWPLL 238
Query: 343 KLAGLSSLKSLNLDARQITDTGLA-----ALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
L +SL LNL + IT+T L+ A L LTHL+L I+ A +
Sbjct: 239 DLMPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIR 298
Query: 398 LRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQN 430
L+ L I G L + L L +LN+SQN
Sbjct: 299 LQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQN 331
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
K L+LS ++ S LE I+LS I++ L +L+SL L ++
Sbjct: 60 KILDLSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKL 119
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 422
L T L+ LT LD+ +I ++ NL+SLE+ L + L SL
Sbjct: 120 VPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSL 179
Query: 423 TLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 477
L L + CNLT E +S L L++L++ + I + + K L +L++L ++
Sbjct: 180 EQLTL-EKCNLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEID 233
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 115/279 (41%), Gaps = 17/279 (6%)
Query: 212 EGCPVTAACLD-------SLSALGSLFYLNLNRCQLSDDGCEK-----FSKIGSLKVLNL 259
EG P+ LD S++ + Y L LSD+ F+ + +L+ L L
Sbjct: 53 EGIPIETKILDLSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRL 112
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
N + L GL+NL L++ I L NLK LE+ D + R
Sbjct: 113 KGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRA 172
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
SGL +LE + L ++ L+ L SL +L+L I + + A L L +L++
Sbjct: 173 FSGLLSLEQLTLEKCNLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEI 232
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLE 439
+ D A NL SL I L+ K L LT LNLS N T+E
Sbjct: 233 DYWPLLDLMPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYN---PISTIE 289
Query: 440 --LISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 476
+ S L L L++ +++ + + L+ LR L +
Sbjct: 290 AGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNV 328
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 7/243 (2%)
Query: 116 NNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
+N I AF L NL L L+ R + G+ GL L L+I + D
Sbjct: 90 DNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGV--FTGLSNLTKLDISENKIVILLDY 147
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
L NLKSL++ + + GL L L LE C +TA ++LS L SL L
Sbjct: 148 M-FQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLIAL 206
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH-LKGLTNLESLNLDSCGIGDEG 292
+L +++ F ++ LK L + + + D + L GL NL SL++ + +
Sbjct: 207 HLKHLNINNMPVYAFKRLFHLKNLEIDYWPLLDLMPANSLYGL-NLTSLSITNTNLSTVP 265
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+ L L L LS + + S L L+ +++ + GL L+
Sbjct: 266 FLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRV 325
Query: 353 LNL 355
LN+
Sbjct: 326 LNV 328
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 7/208 (3%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDF--NFCIQISDGGLEHLRGLSNLTSLSFR 114
S+L +D+S + + +D NL+SL+ N + IS GL +L L+
Sbjct: 129 SNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFS---GLLSLEQLTLE 185
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
+ N +TA +A + L +L+ L L+ + + K L L++L I + +
Sbjct: 186 KCN-LTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEIDYWPLLDLMPAN 244
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L GL NL SL I+ + ++ K L LT LNL P++ S L L L+
Sbjct: 245 SLYGL-NLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELH 303
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
+ QL F + L+VLN+ N
Sbjct: 304 IVGAQLRTIEPHSFQGLRFLRVLNVSQN 331
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 5/135 (3%)
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
K L+L ++ S L +DL I + N NLRSL + G L
Sbjct: 60 KILDLSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKL 119
Query: 411 AGVKHIKDLSSLTLLNLSQN--CNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPL 468
+ LS+LT L++S+N L D + L L SL V ++ + R L
Sbjct: 120 VPLGVFTGLSNLTKLDISENKIVILLDY---MFQDLHNLKSLEVGDNDLVYISHRAFSGL 176
Query: 469 KNLRSLTLESCKVTA 483
+L LTLE C +TA
Sbjct: 177 LSLEQLTLEKCNLTA 191
>sp|Q52KR2|LRIG2_MOUSE Leucine-rich repeats and immunoglobulin-like domains protein 2
OS=Mus musculus GN=Lrig2 PE=2 SV=1
Length = 1054
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 129/299 (43%), Gaps = 9/299 (3%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLK--GLQKLTLLNLEGCPVTAACLDS 223
N I + + + + L+SL +S + +++ + L+ L L N + A C D+
Sbjct: 129 NLIPEINAEAFELYSALESLDLSSNIISEIKTSSFPRMSLKYLNLSNNRISTLEAGCFDN 188
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
LS SL + LNR ++S + F K+ L+ L L N I + +GL +L SL +
Sbjct: 189 LS--DSLLVVKLNRNRISMIPPKVF-KLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKM 245
Query: 284 DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
GI GL N++ LEL + L GL L+ + +S I S
Sbjct: 246 QRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDA 305
Query: 344 LAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 403
L L+L Q+T +A L+ L L+L R+T R NL++L++
Sbjct: 306 WEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDL 365
Query: 404 CGGGLTDA---GVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITS 459
++ A + L SLT L L N + T + GL L L+++N+ I S
Sbjct: 366 RNNDISWAIEDASEAFSGLKSLTKLILQGN-RIKSVTQKAFIGLESLEYLDLNNNAIMS 423
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 7/224 (3%)
Query: 117 NAITAQGMKAFAGLINLVKLDLERC-TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKP 175
N I+ K F L +L L+L+R +I GL +GL L SL ++ N I+
Sbjct: 201 NRISMIPPKVFK-LPHLQFLELKRNRIKIVEGLT-FQGLDSLRSLKMQ-RNGISKLKDGA 257
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
GL N++ L++ + +T +L GL+ L L + + D+ L L+L
Sbjct: 258 FFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDL 317
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG---DEG 292
+ QL+ F + L+ LNLG N +T + L+NL++L+L + I ++
Sbjct: 318 SYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDA 377
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGI 336
+GL +L L L ++ S + GL +LE ++L+ I
Sbjct: 378 SEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAI 421
>sp|Q32Q07|LRRN1_RAT Leucine-rich repeat neuronal protein 1 OS=Rattus norvegicus
GN=Lrrn1 PE=2 SV=1
Length = 716
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 142/340 (41%), Gaps = 32/340 (9%)
Query: 140 RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 199
R TRI G L + ++ L+S NI T +++ L LT L Q + + + + G+A
Sbjct: 62 RLTRIPGNLSSDTQVLLLQSNNI----AKTVDELQQLFNLTELDFSQNNFTNIKEVGLAN 117
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
L L L L + +T CL LS L L+ +N Q+S FS + +L L+L
Sbjct: 118 LTQLTTLHLEENQISEMTDYCLQDLSNLQELY---INHNQISSISANAFSGLKNLLRLHL 174
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
N+ L ++S DS NL+ L + + V +
Sbjct: 175 NSNK-----------LKVIDSRWFDSTP-------------NLEILMIGENPVIGILDMN 210
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
L+NL S+ L+ ++D L GL SL+SL+ ++ AL + L LDL
Sbjct: 211 FRPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLIKVPQLALQKVPNLKFLDL 270
Query: 380 FGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTL 438
I +N L+ L I G L + +L LT L + N L+
Sbjct: 271 NKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHR 330
Query: 439 ELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 478
+ L SL ++N+ + + + ++ L NLR +++ S
Sbjct: 331 LAFRSVPALESLMLNNNALNAVYQKTVESLPNLREISIHS 370
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 126/289 (43%), Gaps = 19/289 (6%)
Query: 218 AACLDSLSALGSLFYLNL---NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 274
A +D L L +L L+ N + + G +++ +L + +E+TD CL +
Sbjct: 85 AKTVDELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDYCL---QD 141
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL--- 331
L+NL+ L ++ I +GL NL L L+ ++ R NLE + +
Sbjct: 142 LSNLQELYINHNQISSISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGEN 201
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
GI D + R LS+L+SL L +TD AL L L L + ++
Sbjct: 202 PVIGILDMNFRP---LSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLIKVPQLA 258
Query: 392 LRNFKNLRSLEICGGG---LTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLV 448
L+ NL+ L++ + + K++ L L + N+ + ++ L+ + LT L
Sbjct: 259 LQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLE 318
Query: 449 SLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 497
+ N N +++ + + L SL L + + A K ++S LPNL
Sbjct: 319 ATN--NPKLSYIHRLAFRSVPALESLMLNNNALNAVYQKTVES--LPNL 363
Score = 40.0 bits (92), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 17/230 (7%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L +D S ++ T+ + L + + L +L QIS+ L+ LSNL L + +N
Sbjct: 96 NLTELDFSQNNFTNIKEVGLANLTQLTTLHLEEN-QISEMTDYCLQDLSNLQEL-YINHN 153
Query: 118 AITAQGMKAFAGLINLVKLDLERC------TRIHGGLVNLKGLMKLESLNIKWCNCITDS 171
I++ AF+GL NL++L L +R NL+ LM E+ I I D
Sbjct: 154 QISSISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIG----ILDM 209
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
+ +PLS NL+SL ++ +TD L GL L L+ + +L + +L
Sbjct: 210 NFRPLS---NLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLIKVPQLALQKVPNLK 266
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
+L+LN+ + F + LK LG N + + V L NL L
Sbjct: 267 FLDLNKNPIHKIQEGDFKNMLRLK--ELGINNMGELVSVDRYALDNLPEL 314
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 105/257 (40%), Gaps = 7/257 (2%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
++ L+ L NLT L F +NN + + A L L L LE L+ L L+
Sbjct: 88 VDELQQLFNLTELDFSQNNFTNIKEV-GLANLTQLTTLHLEENQISEMTDYCLQDLSNLQ 146
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
L I N I+ SGL NL L ++ +K+ + L +L + PV
Sbjct: 147 ELYIN-HNQISSISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIG 205
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
+ L +L L L L+D + SL+ L+ N++ + L+ + NL
Sbjct: 206 ILDMNFRPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLIKVPQLALQKVPNL 265
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSD----TQVGSSGLRHLSGLTNLESI-NLSF 333
+ L+L+ I + + LK L +++ V L +L LT LE+ N
Sbjct: 266 KFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKL 325
Query: 334 TGISDGSLRKLAGLSSL 350
+ I + R + L SL
Sbjct: 326 SYIHRLAFRSVPALESL 342
>sp|Q61809|LRRN1_MOUSE Leucine-rich repeat neuronal protein 1 OS=Mus musculus GN=Lrrn1
PE=2 SV=1
Length = 716
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 142/340 (41%), Gaps = 32/340 (9%)
Query: 140 RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 199
R TRI G L + ++ L+S NI T +++ L LT L Q + + + + G+A
Sbjct: 62 RLTRIPGNLSSDTQVLLLQSNNI----AKTVDELQQLFNLTELDFSQNNFTNIKEVGLAN 117
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
L L L L + +T CL LS L L+ +N Q+S FS + +L L+L
Sbjct: 118 LTQLTTLHLEENQISEMTDYCLQDLSNLQELY---INHNQISTISANAFSGLKNLLRLHL 174
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
N+ L ++S DS NL+ L + + V +
Sbjct: 175 NSNK-----------LKVIDSRWFDSTP-------------NLEILMIGENPVIGILDMN 210
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
L+NL S+ L+ ++D L GL SL+SL+ ++ AL + L LDL
Sbjct: 211 FRPLSNLRSLVLAGMYLTDVPGNALVGLDSLESLSFYDNKLIKVPQLALQKVPNLKFLDL 270
Query: 380 FGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTL 438
I +N L+ L I G L + +L LT L + N L+
Sbjct: 271 NKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHR 330
Query: 439 ELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 478
+ L SL ++N+ + + + ++ L NLR +++ S
Sbjct: 331 LAFRSVPALESLMLNNNALNAVYQKTVESLPNLREISIHS 370
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 126/289 (43%), Gaps = 19/289 (6%)
Query: 218 AACLDSLSALGSLFYLNL---NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 274
A +D L L +L L+ N + + G +++ +L + +E+TD CL +
Sbjct: 85 AKTVDELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDYCL---QD 141
Query: 275 LTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL--- 331
L+NL+ L ++ I +GL NL L L+ ++ R NLE + +
Sbjct: 142 LSNLQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGEN 201
Query: 332 SFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
GI D + R LS+L+SL L +TD AL L L L + ++
Sbjct: 202 PVIGILDMNFRP---LSNLRSLVLAGMYLTDVPGNALVGLDSLESLSFYDNKLIKVPQLA 258
Query: 392 LRNFKNLRSLEICGGG---LTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLV 448
L+ NL+ L++ + + K++ L L + N+ + ++ L+ + LT L
Sbjct: 259 LQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLE 318
Query: 449 SLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 497
+ N N +++ + + L SL L + + A K ++S LPNL
Sbjct: 319 ATN--NPKLSYIHRLAFRSVPALESLMLNNNALNAVYQKTVES--LPNL 363
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 105/257 (40%), Gaps = 7/257 (2%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
++ L+ L NLT L F +NN + + A L L L LE L+ L L+
Sbjct: 88 VDELQQLFNLTELDFSQNNFTNIKEV-GLANLTQLTTLHLEENQISEMTDYCLQDLSNLQ 146
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
L I N I+ SGL NL L ++ +K+ + L +L + PV
Sbjct: 147 ELYIN-HNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIG 205
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
+ L +L L L L+D + SL+ L+ N++ + L+ + NL
Sbjct: 206 ILDMNFRPLSNLRSLVLAGMYLTDVPGNALVGLDSLESLSFYDNKLIKVPQLALQKVPNL 265
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSD----TQVGSSGLRHLSGLTNLESI-NLSF 333
+ L+L+ I + + LK L +++ V L +L LT LE+ N
Sbjct: 266 KFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKL 325
Query: 334 TGISDGSLRKLAGLSSL 350
+ I + R + L SL
Sbjct: 326 SYIHRLAFRSVPALESL 342
>sp|A2RT62|FXL16_MOUSE F-box/LRR-repeat protein 16 OS=Mus musculus GN=Fbxl16 PE=2 SV=1
Length = 479
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 128/264 (48%), Gaps = 23/264 (8%)
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNLESLNLDSC------ 286
+L+ C+ D+ SK G +K ++L + ITD L V L+ + + L L C
Sbjct: 178 DLDICEFIDN--YSLSKKG-VKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFTEA 234
Query: 287 GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLA- 345
G+ +T L C+ ++D + + + L L NL ++L ++D +L
Sbjct: 235 GLWSSLSARITSLSVSDCINVADDAIAA--ISQL--LPNLAELSLQAYHVTDTALAYFTA 290
Query: 346 --GLSSLKSLNLDARQITDTGLA-ALTSLTGLTHLDLFG-ARITDSGAAYL-RNFKNLRS 400
G S+ L +IT+ G+ + SL LT L L G +++TD G + N + LRS
Sbjct: 291 RQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRS 350
Query: 401 LEICG-GGLTDAGVKHIK-DLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNS-RI 457
L++ +TD ++++ DL L L L + +TD L +S ++ L SL + ++
Sbjct: 351 LDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQV 410
Query: 458 TSAGLRHLKPLKNLRSLTLESCKV 481
GL+HL ++NLR L+L C +
Sbjct: 411 QDFGLKHLLAMRNLRLLSLAGCPL 434
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 25/225 (11%)
Query: 20 LTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDL-SGSDVTDSGLIHL- 77
L E+SL+A+ + D L + A QG S ++ L S ++T+ G++++
Sbjct: 270 LAELSLQAYH---VTDTALAYF----------TARQGHSTHTLRLLSCWEITNHGVVNVV 316
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVK 135
NL SL + C +++D G+E + L L SL IT ++ A L L +
Sbjct: 317 HSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEE 376
Query: 136 LDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVT 193
L L+RC RI GL L + L SL ++WC + D +K L + NL+ L ++ C +T
Sbjct: 377 LVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLAMRNLRLLSLAGCPLLT 436
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+G++ L LQ+L L L CP + L F +L RC
Sbjct: 437 TTGLSGLVQLQELEELELTNCP------GATPELFKYFSQHLPRC 475
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 27/258 (10%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAF---------AGL-------INLVKLDLERCTRIH 145
L G+S+L F N +++ +G+KA AGL +V+L+L C
Sbjct: 173 LVGVSDLDICEFIDNYSLSKKGVKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFT 232
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL-TNLKSLQISCSKVTDSGIAYL---K 201
+ ++ SL++ C + D + +S L NL L + VTD+ +AY +
Sbjct: 233 EAGLWSSLSARITSLSVSDCINVADDAIAAISQLLPNLAELSLQAYHVTDTALAYFTARQ 292
Query: 202 GLQKLTLLNLEGCPVT-AACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLN 258
G TL L +T ++ + +L +L L+L+ C +++DDG E ++ + L+ L+
Sbjct: 293 GHSTHTLRLLSCWEITNHGVVNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLD 352
Query: 259 LGF-NEITDECLVHLK-GLTNLESLNLDSC-GIGDEGLVNLTGLCNLKCLELSD-TQVGS 314
L + ITD L ++ L LE L LD C I D GL L+ + +L+ L L QV
Sbjct: 353 LSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQD 412
Query: 315 SGLRHLSGLTNLESINLS 332
GL+HL + NL ++L+
Sbjct: 413 FGLKHLLAMRNLRLLSLA 430
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 123/251 (49%), Gaps = 25/251 (9%)
Query: 244 GCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV----NLTGL 299
G E F +G V +L E D + KG+ ++++L I D GL + G+
Sbjct: 167 GFEGFCLVG---VSDLDICEFIDNYSLSKKGV---KAMSLKRSTITDAGLEVMLEQMQGV 220
Query: 300 CNLK---CLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD 356
L+ C + ++ + SS ++ L+ + IN++ I+ ++ +L L +L L+L
Sbjct: 221 VRLELSGCNDFTEAGLWSSLSARITSLSVSDCINVADDAIA--AISQL--LPNLAELSLQ 276
Query: 357 ARQITDTGLAALTSLTGL-TH-LDLFGA-RITDSGAA-YLRNFKNLRSLEICG-GGLTDA 411
A +TDT LA T+ G TH L L IT+ G + + NL SL + G +TD
Sbjct: 277 AYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLTSLSLSGCSKVTDD 336
Query: 412 GVKHI-KDLSSLTLLNLSQNCNLTDKTLELIS-GLTGLVSLNVSNS-RITSAGLRHLKPL 468
GV+ + ++L L L+LS +TD LE ++ L L L + RIT GL +L +
Sbjct: 337 GVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTM 396
Query: 469 KNLRSLTLESC 479
+LRSL L C
Sbjct: 397 SSLRSLYLRWC 407
>sp|P58682|TLR8_MOUSE Toll-like receptor 8 OS=Mus musculus GN=Tlr8 PE=1 SV=2
Length = 1032
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 143/377 (37%), Gaps = 73/377 (19%)
Query: 50 DVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC------------IQISDG 97
+V + G + ++DLS + +T + NL +D N + I++G
Sbjct: 56 EVPQTIGKYVTNIDLSDNAITHITKESFQKLQNLTKIDLNHNAKQQHPNENKNGMNITEG 115
Query: 98 GLEHLRGLS------------------NLTSLSFRRNNAITAQGMKAFAGLINLVKLDL- 138
L LR L+ +L LS +NN F GL NL +L L
Sbjct: 116 ALLSLRNLTVLLLEDNQLYTIPAGLPESLKELSLIQNNIFQVTKNNTF-GLRNLERLYLG 174
Query: 139 -------ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSK 191
+ ++ G K L+ L+ L++ + N P ++L+ L +S +K
Sbjct: 175 WNCYFKCNQTFKVEDGA--FKNLIHLKVLSLSFNNLFYVPPKLP----SSLRKLFLSNAK 228
Query: 192 VTDSGIAYLKGLQKLTLLNLEG-CP----VTAACLD------------SLSALGSLFYLN 234
+ + KGL+ LTLL+L G CP C + +L L YLN
Sbjct: 229 IMNITQEDFKGLENLTLLDLSGNCPRCYNAPFPCTPCKENSSIHIHPLAFQSLTQLLYLN 288
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL--VHLKGLTNLESLNLDSCGIGDEG 292
L+ L F + +LK L+L FN + E L L +L+ L+L E
Sbjct: 289 LSSTSLRTIPSTWFENLSNLKELHLEFNYLVQEIASGAFLTKLPSLQILDLSFNFQYKEY 348
Query: 293 LV------NLTGLCNLKCLELSDT---QVGSSGLRHLSGLTNLESINLSFTGISDGSLRK 343
L N + L +LK L L ++ HL L NL +INL I +
Sbjct: 349 LQFINISSNFSKLRSLKKLHLRGYVFRELKKKHFEHLQSLPNLATINLGINFIEKIDFKA 408
Query: 344 LAGLSSLKSLNLDARQI 360
S L + L +I
Sbjct: 409 FQNFSKLDVIYLSGNRI 425
>sp|O15455|TLR3_HUMAN Toll-like receptor 3 OS=Homo sapiens GN=TLR3 PE=1 SV=1
Length = 904
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 151/380 (39%), Gaps = 57/380 (15%)
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
F N I + GL N+ L+L+R ++L L K++ + +W C+ +
Sbjct: 304 FLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQS--ISLASLPKIDDFSFQWLKCLEHLN 361
Query: 173 MK----P------LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
M+ P +GL NLK L +S S + L+ L T ++L P
Sbjct: 362 MEDNDIPGIKSNMFTGLINLKYLSLSNSFTS------LRTLTNETFVSLAHSP------- 408
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNLESL 281
L LNL + ++S + FS +G L+VL+LG NEI E +GL N+ +
Sbjct: 409 -------LHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEI 461
Query: 282 NL---DSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD 338
L + + L L ++ V SS L NL ++LS I++
Sbjct: 462 YLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSP-SPFQPLRNLTILDLSNNNIAN 520
Query: 339 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY-LRNFKN 397
+ L GL L+ L+L LA L G Y L+ +
Sbjct: 521 INDDMLEGLEKLEILDLQ-----HNNLARL------------WKHANPGGPIYFLKGLSH 563
Query: 398 LRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRI 457
L L + G + V+ KDL L +++L N NL + + L SLN+ + I
Sbjct: 564 LHILNLESNGFDEIPVEVFKDLFELKIIDLGLN-NLNTLPASVFNNQVSLKSLNLQKNLI 622
Query: 458 TSAGLRHLKP-LKNLRSLTL 476
TS + P +NL L +
Sbjct: 623 TSVEKKVFGPAFRNLTELDM 642
>sp|Q96IG2|FXL20_HUMAN F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2
Length = 436
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 138/355 (38%), Gaps = 88/355 (24%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C + +D L + S L L +IT +KA +
Sbjct: 114 QNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALS-------- 165
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LNI WC+ +T ++ L G LK+L +
Sbjct: 166 ---------------EGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLED 210
Query: 188 -------------------SCSKVTDSG-IAYLKGLQKLTLLNLEGCP-VTAACLDSLSA 226
+C ++TD G I +G KL L GC +T A L++L
Sbjct: 211 EALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQ 270
Query: 227 -LGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
L L + RC QL+D +GF + C LE ++L+
Sbjct: 271 NCPRLRILEVARCSQLTD----------------VGFTTLARNC-------HELEKMDLE 307
Query: 285 SC-GIGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHL----SGLTNLESINLSFTG-I 336
C I D L+ L+ C L+ L LS + + G+RHL LE I L I
Sbjct: 308 ECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLI 367
Query: 337 SDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
+D SL L SL+ + L D +QIT G+ L + + + A +T +
Sbjct: 368 TDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPPSV 422
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 133/298 (44%), Gaps = 57/298 (19%)
Query: 157 LESLNIKWCNCITDSDMKPLSGL-TNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
+E LN+ C TD+ LS + L+ L + SC+ +T+ + L EGC
Sbjct: 119 IEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALS----------EGC 168
Query: 215 PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDECLVH 271
P+ L LN++ C Q++ DG + + G LK L L G ++ DE L +
Sbjct: 169 PL-------------LEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKY 215
Query: 272 LKG-LTNLESLNLDSC-GIGDEGLV-------NLTGLCNLKCLELSDTQVGSSGLRHLSG 322
+ L +LNL +C I DEGL+ L LC C ++D + + G ++
Sbjct: 216 IGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALG-QNCPR 274
Query: 323 LTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALT------SLTGL 374
L LE S ++D LA L+ ++L+ QITD+ L L+ + L
Sbjct: 275 LRILEVARCS--QLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSL 332
Query: 375 THLDLFGARITDSGAAYLRN----FKNLRSLEICGGGL-TDAGVKHIKDLSSLTLLNL 427
+H +L ITD G +L N L +E+ L TDA ++H+K SL + L
Sbjct: 333 SHCEL----ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIEL 386
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+TD+ L HLK C +L+ ++ C QI+ G++ LR
Sbjct: 367 ITDASLEHLKSCHSLERIELYDCQQITRAGIKRLR 401
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 14 LVYSRC--LTEVSLEAF-RDC-ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD- 68
L +RC LT+V R+C L+ + L + + D + ++ L + LS +
Sbjct: 278 LEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCEL 337
Query: 69 VTDSGLIHLKD--CSN--LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G+ HL + C++ L+ ++ + C I+D LEHL+ +L + IT G+
Sbjct: 338 ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGI 397
Query: 125 K 125
K
Sbjct: 398 K 398
>sp|Q58DG6|FXL20_BOVIN F-box/LRR-repeat protein 20 OS=Bos taurus GN=FBXL20 PE=2 SV=2
Length = 436
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 138/355 (38%), Gaps = 88/355 (24%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C + +D L + S L L +IT +KA +
Sbjct: 114 QNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALS-------- 165
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LNI WC+ +T ++ L G LK+L +
Sbjct: 166 ---------------EGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLED 210
Query: 188 -------------------SCSKVTDSG-IAYLKGLQKLTLLNLEGCP-VTAACLDSLSA 226
+C ++TD G I +G KL L GC +T A L++L
Sbjct: 211 EALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQ 270
Query: 227 -LGSLFYLNLNRC-QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
L L + RC QL+D +GF + C LE ++L+
Sbjct: 271 NCPRLRILEVARCSQLTD----------------VGFTTLARNC-------HELEKMDLE 307
Query: 285 SC-GIGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHL----SGLTNLESINLSFTG-I 336
C I D L+ L+ C L+ L LS + + G+RHL LE I L I
Sbjct: 308 ECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLI 367
Query: 337 SDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
+D SL L SL+ + L D +QIT G+ L + + + A +T +
Sbjct: 368 TDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPPSV 422
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 133/298 (44%), Gaps = 57/298 (19%)
Query: 157 LESLNIKWCNCITDSDMKPLSGL-TNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGC 214
+E LN+ C TD+ LS + L+ L + SC+ +T+ + L EGC
Sbjct: 119 IEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALS----------EGC 168
Query: 215 PVTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDECLVH 271
P+ L LN++ C Q++ DG + + G LK L L G ++ DE L +
Sbjct: 169 PL-------------LEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKY 215
Query: 272 LKG-LTNLESLNLDSC-GIGDEGLV-------NLTGLCNLKCLELSDTQVGSSGLRHLSG 322
+ L +LNL +C I DEGL+ L LC C ++D + + G ++
Sbjct: 216 IGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALG-QNCPR 274
Query: 323 LTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALT------SLTGL 374
L LE S ++D LA L+ ++L+ QITD+ L L+ + L
Sbjct: 275 LRILEVARCS--QLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSL 332
Query: 375 THLDLFGARITDSGAAYLRN----FKNLRSLEICGGGL-TDAGVKHIKDLSSLTLLNL 427
+H +L ITD G +L N L +E+ L TDA ++H+K SL + L
Sbjct: 333 SHCEL----ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIEL 386
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLR 103
+TD+ L HLK C +L+ ++ C QI+ G++ LR
Sbjct: 367 ITDASLEHLKSCHSLERIELYDCQQITRAGIKRLR 401
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 14 LVYSRC--LTEVSLEAF-RDC-ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD- 68
L +RC LT+V R+C L+ + L + + D + ++ L + LS +
Sbjct: 278 LEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCEL 337
Query: 69 VTDSGLIHLKD--CSN--LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G+ HL + C++ L+ ++ + C I+D LEHL+ +L + IT G+
Sbjct: 338 ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGI 397
Query: 125 K 125
K
Sbjct: 398 K 398
>sp|A2ARI4|LGR4_MOUSE Leucine-rich repeat-containing G-protein coupled receptor 4 OS=Mus
musculus GN=Lgr4 PE=2 SV=1
Length = 951
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 103/252 (40%), Gaps = 30/252 (11%)
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K LSGL LK L + +++ ++GL L L L+ +T+ DS L L +L
Sbjct: 99 KALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHL 158
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
L+ L++ S + +L+ L L N I+ I D
Sbjct: 159 WLDDNILTEVPVRPLSNLPTLQALTLALNNIS---------------------SIPDFAF 197
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
NL+ L L L + ++ S GL NLE+++L++ + D + + L SLK L
Sbjct: 198 TNLSSLV---VLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNL-DEFPQAIKALPSLKEL 253
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD--- 410
+ I+ A L + L+ ++ G + N +L SL I G L
Sbjct: 254 GFHSNSISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASLVQWFP 313
Query: 411 --AGVKHIKDLS 420
AG H++ L+
Sbjct: 314 NLAGTVHLESLT 325
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 160/399 (40%), Gaps = 71/399 (17%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDF-----NFCIQISDGGLEHLRGLSNLTSLSF 113
L + L+G+D++ IH K S L+ L N Q+ E +RGLS L SL
Sbjct: 83 LEELQLAGNDLS---FIHPKALSGLKELKVLTLQNN---QLKTVPSEAIRGLSALQSLRL 136
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
N+ IT+ +F GL+ L L L+ + L L L++L + N + D
Sbjct: 137 DANH-ITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDF 195
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL-----NLEGCPVTAACLDSLSALG 228
+ L++L L + +K+ GL L L NL+ P L SL LG
Sbjct: 196 A-FTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNLDEFPQAIKALPSLKELG 254
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGI 288
+ N + DG F+ L+ ++L N ++ L++L SL + +
Sbjct: 255 ----FHSNSISVIPDG--AFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASL 308
Query: 289 GDEGLVNLTGLCNLKCLELSDTQVGS----------------------SGLRHLSGLTNL 326
+ NL G +L+ L L+ T++ S L +G L
Sbjct: 309 V-QWFPNLAGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNDIRDLPSFNGCRAL 367
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLD---ARQITDTGLAALTSLT----------- 372
E I+L IS GL+SL+ L+L R+I A L ++T
Sbjct: 368 EEISLQRNQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTS 427
Query: 373 -------GLTHLDLFG-ARITDSGAAYLRNFKNLRSLEI 403
GL L L G ++ D+ AA R+F NLRSL +
Sbjct: 428 FPTEGLNGLNQLKLVGNFQLKDALAA--RDFANLRSLSV 464
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 2/181 (1%)
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
L+ L+L+ + + LSGL L+ + L + + GLS+L+SL LDA IT
Sbjct: 83 LEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT 142
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSS 421
+ L L HL L +T+ L N L++L + ++ +LSS
Sbjct: 143 SVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSS 202
Query: 422 LTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 481
L +L+L N + + GL L +L+++ + + + +K L +L+ L S +
Sbjct: 203 LVVLHLHNN-KIKSLSQHCFDGLDNLETLDLNYNNLDEFP-QAIKALPSLKELGFHSNSI 260
Query: 482 T 482
+
Sbjct: 261 S 261
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 59/134 (44%), Gaps = 8/134 (5%)
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLT 423
GL+A T LD+ IT +NF L L++ G L+ K + L L
Sbjct: 54 GLSAFTQA-----LDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELK 108
Query: 424 LLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 483
+L L QN L E I GL+ L SL + + ITS + L LR L L+ +T
Sbjct: 109 VLTL-QNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTE 167
Query: 484 NDIKRLQSRDLPNL 497
++ L +LP L
Sbjct: 168 VPVRPLS--NLPTL 179
Score = 39.3 bits (90), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 2/204 (0%)
Query: 255 KVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGS 314
+ L++ N IT K LE L L + L+GL LK L L + Q+ +
Sbjct: 60 QALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT 119
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 374
+ GL+ L+S+ L I+ GL L+ L LD +T+ + L++L L
Sbjct: 120 VPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTL 179
Query: 375 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLT 434
L L I+ N +L L + + L +L L+L N N
Sbjct: 180 QALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDL--NYNNL 237
Query: 435 DKTLELISGLTGLVSLNVSNSRIT 458
D+ + I L L L ++ I+
Sbjct: 238 DEFPQAIKALPSLKELGFHSNSIS 261
>sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3
Length = 436
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 159/400 (39%), Gaps = 81/400 (20%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHL---KDCSN-LQSLDFNFCIQISDGGL 99
V+ W +V+A GS+ +DL G + K C L+ L C+ + D L
Sbjct: 51 VSRAW-NVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNAL 109
Query: 100 ----EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLM 155
++ R + L+ + T + F L LDL CT I ++LK L
Sbjct: 110 RTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCS--KLRHLDLASCTSITN--MSLKALS 165
Query: 156 K----LESLNIKWCNCITDSDMKPL-SGLTNLKSLQI----------------------- 187
+ LE LNI WC+ +T ++ L G LK+L +
Sbjct: 166 EGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVT 225
Query: 188 ----SCSKVTDSG-IAYLKGLQKLTLLNLEGCP-VTAACLDSLSA-LGSLFYLNLNRC-Q 239
+C ++TD G I +G KL L GC +T A L++L L L + RC Q
Sbjct: 226 LNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQ 285
Query: 240 LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLTG 298
L+D +GF + C LE ++L+ C I D L+ L+
Sbjct: 286 LTD----------------VGFTTLARNC-------HELEKMDLEECVQITDSTLIQLSI 322
Query: 299 LC-NLKCLELSDTQ-VGSSGLRHL----SGLTNLESINLSFTG-ISDGSLRKLAGLSSLK 351
C L+ L LS + + G+RHL LE I L I+D SL L SL+
Sbjct: 323 HCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLE 382
Query: 352 SLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
+ L D +QIT G+ L + + + A +T +
Sbjct: 383 RIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPPSV 422
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 142/303 (46%), Gaps = 41/303 (13%)
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYL-KGLQKLTLLNL 211
L L+++ C + D+ ++ + N +++++ C+K TD+ L K KL L+L
Sbjct: 93 LRKLSLRGCLGVGDNALRTFA--QNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLDL 150
Query: 212 EGC-PVTAACLDSLSALGSLF-YLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITD 266
C +T L +LS L LN++ C Q++ DG + + G LK L L G ++ D
Sbjct: 151 ASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLED 210
Query: 267 ECLVHLKG-LTNLESLNLDSC-GIGDEGLV-------NLTGLCNLKCLELSDTQVGSSGL 317
E L ++ L +LNL +C I DEGL+ L LC C ++D + + G
Sbjct: 211 EALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALG- 269
Query: 318 RHLSGLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALT------ 369
++ L LE S ++D LA L+ ++L+ QITD+ L L+
Sbjct: 270 QNCPRLRILEVARCS--QLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRL 327
Query: 370 SLTGLTHLDLFGARITDSGAAYLRN----FKNLRSLEICGGGL-TDAGVKHIKDLSSLTL 424
+ L+H +L ITD G +L N L +E+ L TDA ++H+K SL
Sbjct: 328 QVLSLSHCEL----ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLER 383
Query: 425 LNL 427
+ L
Sbjct: 384 IEL 386
Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 14 LVYSRC--LTEVSLEAF-RDC-ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSD- 68
L +RC LT+V R+C L+ + L + + D + ++ L + LS +
Sbjct: 278 LEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCEL 337
Query: 69 VTDSGLIHLKD--CSN--LQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G+ HL + C++ L+ ++ + C I+D LEHL+ +L + IT G+
Sbjct: 338 ITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGI 397
Query: 125 K 125
K
Sbjct: 398 K 398
>sp|P51886|LUM_RAT Lumican OS=Rattus norvegicus GN=Lum PE=2 SV=1
Length = 338
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 11/145 (7%)
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD-EGLVNLTGLCNLKCLE 306
FSK+ LK L++ +N +T+ K L +L+ N +G +GLVNLT + L+ +
Sbjct: 112 FSKLKQLKKLHINYNNLTESVGPLPKSLQDLQLANNKISKLGSFDGLVNLTFIY-LQHNQ 170
Query: 307 LSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGL-SSLKSLNLDARQITDTGL 365
L + V +S L GL +LE ++LSF +S + AGL +SL +L LD +IT+
Sbjct: 171 LKEEAVSAS----LKGLKSLEYLDLSFNQMS----KLPAGLPTSLLTLYLDNNKITNIPD 222
Query: 366 AALTSLTGLTHLDLFGARITDSGAA 390
TGL +L L + DSG
Sbjct: 223 EYFNRFTGLQYLRLSHNELADSGVP 247
>sp|Q7L985|LIGO2_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 2 OS=Homo sapiens GN=LINGO2
PE=1 SV=1
Length = 606
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 109/273 (39%), Gaps = 40/273 (14%)
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
N I + + + L NL+SL++ +++ + GL LT L++ + LD +
Sbjct: 91 NIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKI-VILLDYM- 148
Query: 226 ALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
F + +LK L +G N++ GL +LE L L+
Sbjct: 149 ----------------------FQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEK 186
Query: 286 C---GIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLR 342
C + E L +L L +L L+ + + L L +LE I L
Sbjct: 187 CNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLE--------IDYWPLL 238
Query: 343 KLAGLSSLKSLNLDARQITDTGLA-----ALTSLTGLTHLDLFGARITDSGAAYLRNFKN 397
+ +SL LNL + +T+T L+ A L LTHL+L I+ A +
Sbjct: 239 DMMPANSLYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIR 298
Query: 398 LRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQN 430
L+ L I G L + L L +LN+SQN
Sbjct: 299 LQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQN 331
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 115/279 (41%), Gaps = 17/279 (6%)
Query: 212 EGCPVTAACLD-------SLSALGSLFYLNLNRCQLSDDGCEK-----FSKIGSLKVLNL 259
EG P+ LD S++ + Y L LSD+ F+ + +L+ L L
Sbjct: 53 EGIPIETKILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRL 112
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRH 319
N + L GL+NL L++ I L NLK LE+ D + R
Sbjct: 113 KGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRA 172
Query: 320 LSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
SGL +LE + L ++ L+ L SL SL+L I + + A L L HL++
Sbjct: 173 FSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEI 232
Query: 380 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLE 439
+ D A NL SL + L+ K L LT LNLS N T+E
Sbjct: 233 DYWPLLDMMPANSLYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYN---PISTIE 289
Query: 440 --LISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 476
+ S L L L++ +++ + + L+ LR L +
Sbjct: 290 AGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNV 328
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 1/175 (0%)
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
K L+LS ++ S LE I+LS I++ L +L+SL L ++
Sbjct: 60 KILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKL 119
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 422
L T L+ LT LD+ +I ++ NL+SLE+ L + L SL
Sbjct: 120 VPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSL 179
Query: 423 TLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 477
L L + CNLT E +S L L+SL++ + I + + K L +L+ L ++
Sbjct: 180 EQLTL-EKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEID 233
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 7/243 (2%)
Query: 116 NNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
+N I AF L NL L L+ R + G+ GL L L+I + D
Sbjct: 90 DNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGV--FTGLSNLTKLDISENKIVILLDY 147
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
L NLKSL++ + + GL L L LE C +TA ++LS L SL L
Sbjct: 148 M-FQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISL 206
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH-LKGLTNLESLNLDSCGIGDEG 292
+L +++ F ++ LK L + + + D + L GL NL SL++ + +
Sbjct: 207 HLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLYGL-NLTSLSVTNTNLSTVP 265
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKS 352
+ L L L LS + + S L L+ +++ + GL L+
Sbjct: 266 FLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRV 325
Query: 353 LNL 355
LN+
Sbjct: 326 LNV 328
Score = 38.9 bits (89), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 30/187 (16%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT----------------RIH 145
+ L NL SL N+ + +AF+GL++L +L LE+C +H
Sbjct: 149 FQDLHNLKSLEVGDNDLVYI-SHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLH 207
Query: 146 GGLVNL--------KGLMKLESLNIKWCNCITDSDMKPLSGLT--NLKSLQISCSKVTDS 195
+N+ K L L+ L I + + DM P + L NL SL ++ + ++
Sbjct: 208 LKHLNINNMPVYAFKRLFHLKHLEIDYWPLL---DMMPANSLYGLNLTSLSVTNTNLSTV 264
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
K L LT LNL P++ S L L L++ QL F + L+
Sbjct: 265 PFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLR 324
Query: 256 VLNLGFN 262
VLN+ N
Sbjct: 325 VLNVSQN 331
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 5/135 (3%)
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
K L+L ++ S L +DL I + N NLRSL + G L
Sbjct: 60 KILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKL 119
Query: 411 AGVKHIKDLSSLTLLNLSQN--CNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPL 468
+ LS+LT L++S+N L D + L L SL V ++ + R L
Sbjct: 120 VPLGVFTGLSNLTKLDISENKIVILLDY---MFQDLHNLKSLEVGDNDLVYISHRAFSGL 176
Query: 469 KNLRSLTLESCKVTA 483
+L LTLE C +TA
Sbjct: 177 LSLEQLTLEKCNLTA 191
>sp|A4IIW9|LIGO1_XENTR Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Xenopus tropicalis
GN=lingo1 PE=2 SV=1
Length = 606
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 112/260 (43%), Gaps = 10/260 (3%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
S L+ L+++ + V+ GL L L L + L + L +L L++
Sbjct: 77 FSAFPYLEELELNENIVSIIEPGAFNGLFNLRSLGLRSNRLKLIPLGVFTGLSNLTQLDI 136
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC---GIGDEG 292
+ ++ + F + +LK L +G N++ +GL +LE L L+ C + E
Sbjct: 137 SENKIVILLDDMFQDLYNLKSLEVGDNDLVYISHRAFRGLNSLEELTLEKCNLTSVPTEA 196
Query: 293 LVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSF--TGISDGSLRKLAGLSSL 350
L +L GL LK L+ + + L L NLE + + T S+G L GL+ L
Sbjct: 197 LSHLHGLITLKLRYLNINVIRDYSFKRLYRLKNLEIAHWPYLDTMTSNG----LYGLN-L 251
Query: 351 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 410
SL++ ++ A+ L L L+L IT + L L+ + GG L+
Sbjct: 252 TSLSITHSNLSSIPYVAIRHLVYLRFLNLSYNPITAVEGSMLYELLRLQEFHLVGGQLSV 311
Query: 411 AGVKHIKDLSSLTLLNLSQN 430
+ L+ L +LN+S N
Sbjct: 312 VEPYAFRGLNHLKVLNVSSN 331
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 4/172 (2%)
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
+ L+LS ++ + S LE + L+ +S GL +L+SL L + ++
Sbjct: 60 RLLDLSKNRIKALNQDEFSAFPYLEELELNENIVSIIEPGAFNGLFNLRSLGLRSNRLKL 119
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 422
L T L+ LT LD+ +I ++ NL+SLE+ L + + L+SL
Sbjct: 120 IPLGVFTGLSNLTQLDISENKIVILLDDMFQDLYNLKSLEVGDNDLVYISHRAFRGLNSL 179
Query: 423 TLLNLSQNCNLTDKTLELISGLTGLVSLNVSN---SRITSAGLRHLKPLKNL 471
L L + CNLT E +S L GL++L + + I + L LKNL
Sbjct: 180 EELTL-EKCNLTSVPTEALSHLHGLITLKLRYLNINVIRDYSFKRLYRLKNL 230
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 139/355 (39%), Gaps = 40/355 (11%)
Query: 30 DCALQD---LCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSL 86
DC+ QD LC + +++DV + +DLS + + L+ L
Sbjct: 33 DCSPQDRSVLCHRK------RYLDVPEGIPTDTRLLDLSKNRIKALNQDEFSAFPYLEEL 86
Query: 87 DFNF-CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIH 145
+ N + I + G GL NL SL R +N + + F GL NL +LD+ +
Sbjct: 87 ELNENIVSIIEPGA--FNGLFNLRSLGLR-SNRLKLIPLGVFTGLSNLTQLDISENKIV- 142
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
I DM L NLKSL++ + + +GL
Sbjct: 143 ----------------------ILLDDM--FQDLYNLKSLEVGDNDLVYISHRAFRGLNS 178
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
L L LE C +T+ ++LS L L L L ++ F ++ LK L +
Sbjct: 179 LEELTLEKCNLTSVPTEALSHLHGLITLKLRYLNINVIRDYSFKRLYRLKNLEIAHWPYL 238
Query: 266 DECLVH-LKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLT 324
D + L GL NL SL++ + V + L L+ L LS + + L L
Sbjct: 239 DTMTSNGLYGL-NLTSLSITHSNLSSIPYVAIRHLVYLRFLNLSYNPITAVEGSMLYELL 297
Query: 325 NLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 379
L+ +L +S GL+ LK LN+ + ++ ++ S+ L L L
Sbjct: 298 RLQEFHLVGGQLSVVEPYAFRGLNHLKVLNVSSNYLSTLEESSFHSVGNLETLIL 352
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 82/217 (37%), Gaps = 54/217 (24%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC---TRIHGGLVNLKGL--MK 156
+ L NL SL N+ + +AF GL +L +L LE+C + L +L GL +K
Sbjct: 149 FQDLYNLKSLEVGDNDLVYI-SHRAFRGLNSLEELTLEKCNLTSVPTEALSHLHGLITLK 207
Query: 157 LESLNIKWCNCITDSDMKPLSGLTNLK---------------------SLQISCSKVTDS 195
L LNI N I D K L L NL+ SL I+ S ++
Sbjct: 208 LRYLNI---NVIRDYSFKRLYRLKNLEIAHWPYLDTMTSNGLYGLNLTSLSITHSNLSSI 264
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAAC------------------------LDSLSALGSLF 231
++ L L LNL P+TA + L L
Sbjct: 265 PYVAIRHLVYLRFLNLSYNPITAVEGSMLYELLRLQEFHLVGGQLSVVEPYAFRGLNHLK 324
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC 268
LN++ LS F +G+L+ L L N + +C
Sbjct: 325 VLNVSSNYLSTLEESSFHSVGNLETLILDKNPLACDC 361
>sp|Q9UKC9|FBXL2_HUMAN F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL2 PE=1 SV=3
Length = 423
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 164/379 (43%), Gaps = 89/379 (23%)
Query: 157 LESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEG 213
L L+++ C + DS +K + N++ L ++ C+K+TDS L + KL L+L
Sbjct: 80 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTS 139
Query: 214 C-PVTAACLDSLS-ALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDEC 268
C +T + L +S +L YLNL+ C Q++ DG E + LK L L G ++ DE
Sbjct: 140 CVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEA 199
Query: 269 LVHLKGLTN-LESLNLDSCG-IGDEGLVN-------LTGLCNLKCLELSDTQVGSSGLRH 319
L H++ + L SLNL SC I DEG+V L LC C L+D + + GL +
Sbjct: 200 LKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGL-N 258
Query: 320 LSGLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALT------SL 371
L LE+ S ++D LA L+ ++L+ ITD+ L L+
Sbjct: 259 CPRLQILEAARCSH--LTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQA 316
Query: 372 TGLTHLDLFGARITDSGAAYLRN----FKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNL 427
L+H +L ITD G +L N + LR LE+
Sbjct: 317 LSLSHCEL----ITDDGILHLSNSTCGHERLRVLEL------------------------ 348
Query: 428 SQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC-KVTANDI 486
NC L IT L HL+ + L L L C +VT I
Sbjct: 349 -DNCLL-----------------------ITDVALEHLENCRGLERLELYDCQQVTRAGI 384
Query: 487 KRLQSRDLPNL---VSFRP 502
KR++++ LP++ F P
Sbjct: 385 KRMRAQ-LPHVKVHAYFAP 402
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 142/354 (40%), Gaps = 86/354 (24%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C +I+D L R S L L +IT +K +
Sbjct: 101 QNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGIS-------- 152
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LN+ WC+ IT ++ L G LK+L +
Sbjct: 153 ---------------EGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLED 197
Query: 188 -------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSA 226
SCS++TD G+ + +G +L L L GC +T A SL+A
Sbjct: 198 EALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDA---SLTA 254
Query: 227 LGSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
LG LN R Q+ + C + + GF + C LE ++L+
Sbjct: 255 LG----LNCPRLQILEAARCSHLT--------DAGFTLLARNC-------HELEKMDLEE 295
Query: 286 CG-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS----GLTNLESINL-SFTGIS 337
C I D L+ L+ C L+ L LS + + G+ HLS G L + L + I+
Sbjct: 296 CILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLIT 355
Query: 338 DGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
D +L L L+ L L D +Q+T G+ + + + + A +T A
Sbjct: 356 DVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPTAV 409
Score = 35.4 bits (80), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 69 VTDSGLIHLKDCS----NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G++HL + + L+ L+ + C+ I+D LEHL L L +T G+
Sbjct: 325 ITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGI 384
Query: 125 KAFAGLINLVKL 136
K + VK+
Sbjct: 385 KRMRAQLPHVKV 396
>sp|Q5R3Z8|FBXL2_PONAB F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL2 PE=2 SV=1
Length = 423
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 164/379 (43%), Gaps = 89/379 (23%)
Query: 157 LESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEG 213
L L+++ C + DS +K + N++ L ++ C+K+TDS L + KL L+L
Sbjct: 80 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTS 139
Query: 214 C-PVTAACLDSLS-ALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDEC 268
C +T + L +S +L YLNL+ C Q++ DG E + LK L L G ++ DE
Sbjct: 140 CVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEA 199
Query: 269 LVHLKGLTN-LESLNLDSCG-IGDEGLVN-------LTGLCNLKCLELSDTQVGSSGLRH 319
L H++ + L SLNL SC I DEG+V L LC C L+D + + GL +
Sbjct: 200 LKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGL-N 258
Query: 320 LSGLTNLESINLSFTGISDGSLRKLA-GLSSLKSLNLD-ARQITDTGLAALT------SL 371
L LE+ S ++D LA L+ ++L+ ITD+ L L+
Sbjct: 259 CPRLQILEAARCSH--LTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQA 316
Query: 372 TGLTHLDLFGARITDSGAAYLRN----FKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNL 427
L+H +L ITD G +L N + LR LE+
Sbjct: 317 LSLSHCEL----ITDDGILHLSNSTCGHERLRVLEL------------------------ 348
Query: 428 SQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC-KVTANDI 486
NC L IT L HL+ + L L L C +VT I
Sbjct: 349 -DNCLL-----------------------ITDVALEHLENCRGLERLELYDCQQVTRAGI 384
Query: 487 KRLQSRDLPNL---VSFRP 502
KR++++ LP++ F P
Sbjct: 385 KRMRAQ-LPHVKVHAYFAP 402
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 142/354 (40%), Gaps = 86/354 (24%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C +I+D L R S L L +IT +K +
Sbjct: 101 QNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGIS-------- 152
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LN+ WC+ IT ++ L G LK+L +
Sbjct: 153 ---------------EGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLED 197
Query: 188 -------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSA 226
SCS++TD G+ + +G +L L L GC +T A SL+A
Sbjct: 198 EALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDA---SLTA 254
Query: 227 LGSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
LG LN R Q+ + C + + GF + C LE ++L+
Sbjct: 255 LG----LNCPRLQILEAARCSHLT--------DAGFTLLARNC-------HELEKMDLEE 295
Query: 286 CG-IGDEGLVNLTGLC-NLKCLELSDTQ-VGSSGLRHLS----GLTNLESINL-SFTGIS 337
C I D L+ L+ C L+ L LS + + G+ HLS G L + L + I+
Sbjct: 296 CILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLIT 355
Query: 338 DGSLRKLAGLSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 390
D +L L L+ L L D +Q+T G+ + + + + A +T A
Sbjct: 356 DVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPTAV 409
Score = 35.4 bits (80), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 69 VTDSGLIHLKDCS----NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G++HL + + L+ L+ + C+ I+D LEHL L L +T G+
Sbjct: 325 ITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGI 384
Query: 125 KAFAGLINLVKL 136
K + VK+
Sbjct: 385 KRMRAQLPHVKV 396
>sp|A0N0X6|LRRN1_BOVIN Leucine-rich repeat neuronal protein 1 OS=Bos taurus GN=LRRN1 PE=3
SV=1
Length = 716
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 144/343 (41%), Gaps = 38/343 (11%)
Query: 140 RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 199
R TRI L + ++ L+S NI T +++ L LT L Q + + + + G+A
Sbjct: 62 RLTRIPSNLSSDTQVLLLQSNNI----AKTVDELQQLFNLTELDFSQNNFTNIKEVGLA- 116
Query: 200 LKGLQKLTLLNLEGCPVTA---ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
L +LT L+LE +T CL LS L L+ +N Q+S FS + +L
Sbjct: 117 --NLTQLTTLHLEENQITEMNDYCLQDLSNLQELY---INHNQISTISANAFSGLKNLLR 171
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSG 316
L+L N+ L ++S DS NL+ L + + V
Sbjct: 172 LHLNSNK-----------LKVIDSRWFDSTP-------------NLEILMIGENPVIGIL 207
Query: 317 LRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTH 376
+ L+NL S+ L+ ++D L GL SL+SL+ ++ AL + L
Sbjct: 208 DMNFKPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLVKVPQLALQKVPNLKF 267
Query: 377 LDLFGARITDSGAAYLRNFKNLRSLEICG-GGLTDAGVKHIKDLSSLTLLNLSQNCNLTD 435
LDL I +N L+ L I G L + +L LT L + N L+
Sbjct: 268 LDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSY 327
Query: 436 KTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 478
+ L SL ++N+ + + + ++ L NLR +++ S
Sbjct: 328 IHRLAFRSVPALESLMLNNNALNAVYQKTVESLPNLREISIHS 370
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 13/286 (4%)
Query: 218 AACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTN 277
A +D L L +L L+ ++ ++ + + L L+L N+IT+ L+ L+N
Sbjct: 85 AKTVDELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMNDYCLQDLSN 144
Query: 278 LESLNLDSCGIGDEGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINL---SFT 334
L+ L ++ I +GL NL L L+ ++ R NLE + +
Sbjct: 145 LQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVI 204
Query: 335 GISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRN 394
GI D + + LS+L+SL L +TD AL L L L + ++ L+
Sbjct: 205 GILDMNFK---PLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLVKVPQLALQK 261
Query: 395 FKNLRSLEICGGG---LTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLN 451
NL+ L++ + + K++ L L + N+ + ++ L+ + LT L + N
Sbjct: 262 VPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATN 321
Query: 452 VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNL 497
N +++ + + L SL L + + A K ++S LPNL
Sbjct: 322 --NPKLSYIHRLAFRSVPALESLMLNNNALNAVYQKTVES--LPNL 363
Score = 39.7 bits (91), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 105/257 (40%), Gaps = 7/257 (2%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
++ L+ L NLT L F +NN + + A L L L LE L+ L L+
Sbjct: 88 VDELQQLFNLTELDFSQNNFTNIKEV-GLANLTQLTTLHLEENQITEMNDYCLQDLSNLQ 146
Query: 159 SLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA 218
L I N I+ SGL NL L ++ +K+ + L +L + PV
Sbjct: 147 ELYIN-HNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIG 205
Query: 219 ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNL 278
+ L +L L L L+D + SL+ L+ N++ + L+ + NL
Sbjct: 206 ILDMNFKPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLVKVPQLALQKVPNL 265
Query: 279 ESLNLDSCGIGDEGLVNLTGLCNLKCLELSD----TQVGSSGLRHLSGLTNLESI-NLSF 333
+ L+L+ I + + LK L +++ V L +L LT LE+ N
Sbjct: 266 KFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKL 325
Query: 334 TGISDGSLRKLAGLSSL 350
+ I + R + L SL
Sbjct: 326 SYIHRLAFRSVPALESL 342
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 93/231 (40%), Gaps = 41/231 (17%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+ L ++ L + +T+ L+D SNLQ L N +
Sbjct: 119 TQLTTLHLEENQITEMNDYCLQDLSNLQELYIN--------------------------H 152
Query: 117 NAITAQGMKAFAGLINLVKLDLERC------TRIHGGLVNLKGLMKLESLNIKWCNCITD 170
N I+ AF+GL NL++L L +R NL+ LM E+ I I D
Sbjct: 153 NQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIG----ILD 208
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
+ KPLS NL+SL ++ +TD L GL L L+ + +L + +L
Sbjct: 209 MNFKPLS---NLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLVKVPQLALQKVPNL 265
Query: 231 FYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
+L+LN+ + F + LK LG N + + V L NL L
Sbjct: 266 KFLDLNKNPIHKIQEGDFKNMLRLK--ELGINNMGELVSVDRYALDNLPEL 314
>sp|Q8R5M3|LRC15_RAT Leucine-rich repeat-containing protein 15 OS=Rattus norvegicus
GN=Lrrc15 PE=2 SV=1
Length = 578
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 141/364 (38%), Gaps = 36/364 (9%)
Query: 116 NNAITAQGMKAFAGLINLVKLDLER---CTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
N IT F + L+ L +E+ T + G NL L L N N +
Sbjct: 62 NTHITELPENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLAN----NKLRMLP 117
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
++ + NL+SL +S +++ A L L L G + + ++ L L
Sbjct: 118 IRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTK 177
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG--D 290
LNL R + F +G+L+VL L N ++D + L NL+ L L IG
Sbjct: 178 LNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLS 237
Query: 291 EGLVNLTGLCNLKCLELSDTQVGS-------------------SGLRHLS-----GLTNL 326
GL + NL+ L LS+ + + LR LS + NL
Sbjct: 238 PGLFHNNR--NLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNL 295
Query: 327 ESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITD 386
+ L I+ + + L+ L+ L L Q+T A LT L L L + D
Sbjct: 296 RELWLYNNHITSLADNTFSHLNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQD 355
Query: 387 SGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTG 446
+ R+ NL+++ + L +++ LT + L QN NL + L + L
Sbjct: 356 LDSNVFRSLANLQNISLQSNRLRQLPGSIFANVNGLTTIQL-QNNNLENLPLGIFDHLVN 414
Query: 447 LVSL 450
L L
Sbjct: 415 LCEL 418
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 132/330 (40%), Gaps = 35/330 (10%)
Query: 181 NLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQL 240
N SLQ+ + +T+ + L L +E ++ + LGSL YL+L +L
Sbjct: 54 NAMSLQVVNTHITELPENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKL 113
Query: 241 SDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL-----NLDSCGIGDEGLVN 295
F + +L+ L L N++ +NL L NL+S I +E +
Sbjct: 114 RMLPIRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLES--IPEEAFDH 171
Query: 296 LTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISD---------GSLRKLA- 345
L GL L S T + +HL NL+ + L +SD G+L++LA
Sbjct: 172 LVGLTKLNLGRNSFTHLSPRLFQHLG---NLQVLRLHENRLSDIPMGTFDALGNLQELAL 228
Query: 346 ----------GL----SSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAY 391
GL +L+ L L I+ L L L LFG + +
Sbjct: 229 QENQIGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGV 288
Query: 392 LRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLN 451
NLR L + +T L+ L +L LS N LT + +GLT L L+
Sbjct: 289 FGPMPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHN-QLTYISPGAFNGLTNLRELS 347
Query: 452 VSNSRITSAGLRHLKPLKNLRSLTLESCKV 481
+ + + + L NL++++L+S ++
Sbjct: 348 LHTNALQDLDSNVFRSLANLQNISLQSNRL 377
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 5/187 (2%)
Query: 300 CNLKCLELSDTQVGSSGLRHLSGLTNLE----SINLSFTGISDGSLRKLAGLSSLKSLNL 355
C +C +QV +G R ++ T L S+ + T I++ +S+L +L +
Sbjct: 25 CPSECTCSRASQVECTGARIVAMPTPLPWNAMSLQVVNTHITELPENLFLNISALIALKM 84
Query: 356 DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKH 415
+ +++ A +L L +L L ++ ++ NL SL + L
Sbjct: 85 EKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRVFQDVNNLESLLLSNNQLVQIQPAQ 144
Query: 416 IKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 475
S+L L L N NL E L GL LN+ + T R + L NL+ L
Sbjct: 145 FSQFSNLRELQLHGN-NLESIPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLR 203
Query: 476 LESCKVT 482
L +++
Sbjct: 204 LHENRLS 210
>sp|Q9BXB1|LGR4_HUMAN Leucine-rich repeat-containing G-protein coupled receptor 4 OS=Homo
sapiens GN=LGR4 PE=2 SV=2
Length = 951
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 103/252 (40%), Gaps = 30/252 (11%)
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K LSGL LK L + +++ ++GL L L L+ +T+ DS L L +L
Sbjct: 99 KALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHL 158
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
L+ L++ S + +L+ L L N+I+ I D
Sbjct: 159 WLDDNSLTEVPVHPLSNLPTLQALTLALNKIS---------------------SIPDFAF 197
Query: 294 VNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSL 353
NL+ L L L + ++ S GL NLE+++L++ + + + + L SLK L
Sbjct: 198 TNLSSLV---VLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFP-QAIKALPSLKEL 253
Query: 354 NLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD--- 410
+ I+ A L + L+ ++ G + N +L SL I G +
Sbjct: 254 GFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFP 313
Query: 411 --AGVKHIKDLS 420
G H++ L+
Sbjct: 314 NLTGTVHLESLT 325
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 2/182 (1%)
Query: 302 LKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQIT 361
L+ L+L+ + + LSGL L+ + L + + GLS+L+SL LDA IT
Sbjct: 83 LEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT 142
Query: 362 DTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSS 421
+ L L HL L +T+ L N L++L + ++ +LSS
Sbjct: 143 SVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSS 202
Query: 422 LTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 481
L +L+L N + + GL L +L+++ + + + +K L +L+ L S +
Sbjct: 203 LVVLHLHNN-KIRSLSQHCFDGLDNLETLDLNYNNLGEFP-QAIKALPSLKELGFHSNSI 260
Query: 482 TA 483
+
Sbjct: 261 SV 262
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 113/271 (41%), Gaps = 33/271 (12%)
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLCNLKCLELS 308
S + LKVL L N++ ++GL+ L+SL LD+ I + GL L+ L L
Sbjct: 102 SGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLD 161
Query: 309 DTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 368
D + + LS L L+++ L+ IS LSSL L+L +I
Sbjct: 162 DNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCF 221
Query: 369 TSLTGLTHLDLFGARITDSGAAY--LRNFKNL----RSLEICGGGLTDAG----VKHIKD 418
L L LDL + + A L + K L S+ + G D H+ D
Sbjct: 222 DGLDNLETLDLNYNNLGEFPQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYD 281
Query: 419 LSSLTLLNLSQNCNLTD---------KTLELISGLTGLV---SLNVSNSRITSAGLRHLK 466
+ L+ + S NL+D ++ LTG V SL ++ ++I+S +
Sbjct: 282 -NPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSIPNNLCQ 340
Query: 467 PLKNLRSLTLESCKVTANDIKRLQSRDLPNL 497
K LR+L L + N+I RDLP+
Sbjct: 341 EQKMLRTLDL-----SYNNI-----RDLPSF 361
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 8/134 (5%)
Query: 364 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLT 423
GL+A T LD+ IT +NF L L++ G L+ K + L L
Sbjct: 54 GLSAFTQA-----LDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELK 108
Query: 424 LLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTA 483
+L L QN L E I GL+ L SL + + ITS + L LR L L+ +T
Sbjct: 109 VLTL-QNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTE 167
Query: 484 NDIKRLQSRDLPNL 497
+ L +LP L
Sbjct: 168 VPVHPLS--NLPTL 179
>sp|Q96FE5|LIGO1_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Homo sapiens GN=LINGO1
PE=1 SV=2
Length = 620
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 104/251 (41%), Gaps = 13/251 (5%)
Query: 117 NAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N ++A AF L NL L L R I G+ GL L L+I + D
Sbjct: 105 NIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGV--FTGLSNLTKLDISENKIVILLDYM 162
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L NLKSL++ + + GL L L LE C +T+ ++LS L L L
Sbjct: 163 -FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 221
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L ++ F ++ LKVL + + +T CL L NL SL++ C +
Sbjct: 222 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL----NLTSLSITHCNLTA 277
Query: 291 EGLVNLTGLCNLKCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSL 350
+ + L L+ L LS + + L L L+ I L ++ GL+ L
Sbjct: 278 VPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYL 337
Query: 351 KSLNLDARQIT 361
+ LN+ Q+T
Sbjct: 338 RVLNVSGNQLT 348
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Query: 303 KCLELSDTQVGSSGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 362
+ L+L ++ + + +LE + L+ +S L +L++L L + ++
Sbjct: 74 RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL 133
Query: 363 TGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 422
L T L+ LT LD+ +I ++ NL+SLE+ L + L+SL
Sbjct: 134 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSL 193
Query: 423 TLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 476
L L + CNLT E +S L GL+ L + + I + K L L+ L +
Sbjct: 194 EQLTL-EKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEI 246
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 100/257 (38%), Gaps = 48/257 (18%)
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
D ++ L L LN +S F+ + +L+ L L N + L GL+NL L
Sbjct: 89 DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKL 148
Query: 282 -------------------NLDSCGIGDEGLVNLT-----GLCNLKCLELSD---TQVGS 314
NL S +GD LV ++ GL +L+ L L T + +
Sbjct: 149 DISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 208
Query: 315 SGLRHLSGLTNLESINLSFTGISDGSLRKLAGLSSLK----------------SLNLDAR 358
L HL GL L +L+ I D S ++L L L+ LNL +
Sbjct: 209 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSL 268
Query: 359 QITDTGLAALT-----SLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGV 413
IT L A+ L L L+L I+ + L L+ +++ GG L
Sbjct: 269 SITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEP 328
Query: 414 KHIKDLSSLTLLNLSQN 430
+ L+ L +LN+S N
Sbjct: 329 YAFRGLNYLRVLNVSGN 345
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,547,611
Number of Sequences: 539616
Number of extensions: 6724624
Number of successful extensions: 20386
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 514
Number of HSP's that attempted gapping in prelim test: 16222
Number of HSP's gapped (non-prelim): 2762
length of query: 503
length of database: 191,569,459
effective HSP length: 122
effective length of query: 381
effective length of database: 125,736,307
effective search space: 47905532967
effective search space used: 47905532967
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)