BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010713
(503 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 9 GDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
GD M ++ K LS YA ++ G+ LHSKGI+ +LK N +L++ + D
Sbjct: 104 GDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADF 163
Query: 68 XXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
+++ GTP+Y+APE + + D W F + EML G
Sbjct: 164 GMCKENMLGDAKTNEF---CGTPDYIAPEIL---LGQKYNHSVDWWSFGVLLYEMLIGQS 217
Query: 128 PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCF----------EYDLRSRPLMT 177
P G+ +E++ ++ R + P P L +++L+ F D+R PL
Sbjct: 218 PFHGQDEEELFHSI--RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFR 275
Query: 178 DI 179
+I
Sbjct: 276 EI 277
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 16/150 (10%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
YA ++A + LHS I+ +LKP N +L+ VL D +S
Sbjct: 144 YAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTF---C 200
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + P D W + EML G+ P R+ E+YD ++ +
Sbjct: 201 GTPEYLAPEVLH---KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK--- 254
Query: 148 PPIPSGLPPAVEN----VLLGCFEYDLRSR 173
P L P + N +L G + D R
Sbjct: 255 ---PLQLKPNITNSARHLLEGLLQKDRTKR 281
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 21/190 (11%)
Query: 1 MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
M++ G GD M ++ K LS YA ++ G+ LHSKGI+ +LK N +L++
Sbjct: 97 MEYLNG--GDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD 154
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
+ D ++ GTP+Y+APE + + D W F +
Sbjct: 155 GHIKIADFGMCKENMLGDAKTNXF---CGTPDYIAPEIL---LGQKYNHSVDWWSFGVLL 208
Query: 120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCF----------EYD 169
EML G P G+ +E++ ++ R + P P L +++L+ F D
Sbjct: 209 YEMLIGQSPFHGQDEEELFHSI--RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGD 266
Query: 170 LRSRPLMTDI 179
+R PL +I
Sbjct: 267 IRQHPLFREI 276
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 5/166 (3%)
Query: 19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 78
K + + A AQG+ LH+K I+ +LK N L+E +GD
Sbjct: 128 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 187
Query: 79 XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEI 137
S + G+ +MAPE + + + P SF++D + F + E++TG P + D+I
Sbjct: 188 -SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
Query: 138 YDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
V R ++ + S P A++ ++ C + RPL IL
Sbjct: 247 IFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
EGS + K + + A AQG+ LH+K I+ +LK N L+E +
Sbjct: 91 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 150
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
GD S + G+ +MAPE + + + P SF++D + F + E++T
Sbjct: 151 GDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + D+I V R ++ + S P A++ ++ C + RPL IL
Sbjct: 210 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
EGS + K + + A AQG+ LH+K I+ +LK N L+E +
Sbjct: 88 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 147
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
GD S + G+ +MAPE + + + P SF++D + F + E++T
Sbjct: 148 GDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 206
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + D+I V R ++ + S P A++ ++ C + RPL IL
Sbjct: 207 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 266
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
EGS + K + + A AQG+ LH+K I+ +LK N L+E +
Sbjct: 114 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 173
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
GD S + G+ +MAPE + + + P SF++D + F + E++T
Sbjct: 174 GDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + D+I V R ++ + S P A++ ++ C + RPL IL
Sbjct: 233 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
EGS + K + + A AQG+ LH+K I+ +LK N L+E +
Sbjct: 106 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 165
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
GD S + G+ +MAPE + + + P SF++D + F + E++T
Sbjct: 166 GDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 224
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + D+I V R ++ + S P A++ ++ C + RPL IL
Sbjct: 225 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 284
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
EGS + K + + A AQG+ LH+K I+ +LK N L+E +
Sbjct: 91 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 150
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
GD S + G+ +MAPE + + + P SF++D + F + E++T
Sbjct: 151 GDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + D+I V R ++ + S P A++ ++ C + RPL IL
Sbjct: 210 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
EGS + K + + A AQG+ LH+K I+ +LK N L+E +
Sbjct: 113 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 172
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
GD S + G+ +MAPE + + + P SF++D + F + E++T
Sbjct: 173 GDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 231
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + D+I V R ++ + S P A++ ++ C + RPL IL
Sbjct: 232 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 291
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
EGS + K + + A AQG+ LH+K I+ +LK N L+E +
Sbjct: 86 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 145
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
GD S + G+ +MAPE + + + P SF++D + F + E++T
Sbjct: 146 GDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + D+I V R ++ + S P A++ ++ C + RPL IL
Sbjct: 205 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
EGS + K + + A AQG+ LH+K I+ +LK N L+E +
Sbjct: 86 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 145
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
GD S + G+ +MAPE + + + P SF++D + F + E++T
Sbjct: 146 GDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + D+I V R ++ + S P A++ ++ C + RPL IL
Sbjct: 205 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
EGS + K + + A AQG+ LH+K I+ +LK N L+E +
Sbjct: 86 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 145
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
GD S + G+ +MAPE + + + P SF++D + F + E++T
Sbjct: 146 GDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + D+I V R ++ + S P A++ ++ C + RPL IL
Sbjct: 205 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ DR+ + +G L L + RYA+ +A+G+ L SK + +L N +L D +G
Sbjct: 105 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 163
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
D R + APE + S +D+W F ++ EM T
Sbjct: 164 DFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 220
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
G +P G + +I + + E P P P + NV++ C+ + RP
Sbjct: 221 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ DR+ + +G L L + RYA+ +A+G+ L SK + +L N +L D +G
Sbjct: 99 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
D R + APE + S +D+W F ++ EM T
Sbjct: 158 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 214
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
G +P G + +I + + E P P P + NV++ C+ + RP
Sbjct: 215 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ DR+ + +G L L + RYA+ +A+G+ L SK + +L N +L D +G
Sbjct: 95 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
D R + APE + S +D+W F ++ EM T
Sbjct: 154 DFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 210
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
G +P G + +I + + E P P P + NV++ C+ + RP
Sbjct: 211 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 9/150 (6%)
Query: 1 MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
M+F G GD M + K + + YA ++ ++ LH KGI+ +LK N +L+
Sbjct: 103 MEFVNG--GDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHE 160
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
L D ++ GTP+Y+APE Q + GP D W +
Sbjct: 161 GHCKLADFGMCKEGICNGVTTATF---CGTPDYIAPEILQEMLYGP---AVDWWAMGVLL 214
Query: 120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 149
EML G P + D++++A++ + + P
Sbjct: 215 YEMLCGHAPFEAENEDDLFEAILNDEVVYP 244
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ DR+ + +G L L + RYA+ +A+G+ L SK + +L N +L D +G
Sbjct: 99 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
D R + APE + S +D+W F ++ EM T
Sbjct: 158 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 214
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
G +P G + +I + + E P P P + NV++ C+ + RP
Sbjct: 215 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ DR+ + +G L L + RYA+ +A+G+ L SK + +L N +L D +G
Sbjct: 95 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
D R + APE + S +D+W F ++ EM T
Sbjct: 154 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 210
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
G +P G + +I + + E P P P + NV++ C+ + RP
Sbjct: 211 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ DR+ + +G L L + RYA+ +A+G+ L SK + +L N +L D +G
Sbjct: 105 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 163
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
D R + APE + S +D+W F ++ EM T
Sbjct: 164 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 220
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
G +P G + +I + + E P P P + NV++ C+ + RP
Sbjct: 221 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ DR+ + +G L L + RYA+ +A+G+ L SK + +L N +L D +G
Sbjct: 95 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
D R + APE + S +D+W F ++ EM T
Sbjct: 154 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 210
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
G +P G + +I + + E P P P + NV++ C+ + RP
Sbjct: 211 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 5/190 (2%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
EGS + ++ K + + A AQG+ LH+K I+ ++K N L+E +
Sbjct: 114 EGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKI 173
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
GD S + + G+ +MAPE + + P SF++D + + + E++T
Sbjct: 174 GDFGLATVKSRWSG-SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT 232
Query: 125 GVQPRCG-RSVDEIYDAVVRRQEIPPIP---SGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + D+I V R P + P A++ ++ C + RPL IL
Sbjct: 233 GELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQIL 292
Query: 181 RVFKSSQNSV 190
+ Q+S+
Sbjct: 293 SSIELLQHSL 302
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 5/166 (3%)
Query: 19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 78
K + + A A+G+ LH+K I+ +LK N L+E + +GD
Sbjct: 116 KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175
Query: 79 XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEI 137
S + G+ +MAPE + + P SF++D + F + E++TG P + D+I
Sbjct: 176 -SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
Query: 138 YDAVVRRQ---EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ V R ++ + S P ++ ++ C + RP IL
Sbjct: 235 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 5/166 (3%)
Query: 19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 78
K + + A A+G+ LH+K I+ +LK N L+E + +GD
Sbjct: 116 KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175
Query: 79 XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEI 137
S + G+ +MAPE + + P SF++D + F + E++TG P + D+I
Sbjct: 176 -SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
Query: 138 YDAVVRRQ---EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ V R ++ + S P ++ ++ C + RP IL
Sbjct: 235 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 5/166 (3%)
Query: 19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 78
K + + A A+G+ LH+K I+ +LK N L+E + +GD
Sbjct: 104 KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSG 163
Query: 79 XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEI 137
S + G+ +MAPE + + P SF++D + F + E++TG P + D+I
Sbjct: 164 -SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 222
Query: 138 YDAVVRRQ---EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ V R ++ + S P ++ ++ C + RP IL
Sbjct: 223 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 268
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 1 MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
M++ G GD M ++ G+ + YA ++A G+ L SKGI+ +LK N +L+
Sbjct: 421 MEYVNG--GDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE 478
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGFAC 117
+ D + GTP+Y+APE +QP + D W F
Sbjct: 479 GHIKIADFGMCKENIWDGVTTKXF---CGTPDYIAPEIIAYQPYGKS-----VDWWAFGV 530
Query: 118 SIIEMLTGVQPRCGRSVDEIYDAVV 142
+ EML G P G DE++ +++
Sbjct: 531 LLYEMLAGQAPFEGEDEDELFQSIM 555
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 10/164 (6%)
Query: 24 NVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDL 83
V++Y + L + +HS+ ++ ++KP N + LGD+ + L
Sbjct: 137 TVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL 196
Query: 84 PRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV-- 141
+GTP YM+PE+ +F++D W C + EM P G ++ +Y
Sbjct: 197 ---VGTPYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKK 249
Query: 142 VRRQEIPPIPSG-LPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
+ + + PP+PS + ++ C D RP +T + V K
Sbjct: 250 IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 11/144 (7%)
Query: 9 GDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
GD M ++ G+ + YA ++A G+ L SKGI+ +LK N +L+ + D
Sbjct: 106 GDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADF 165
Query: 68 XXXXXXXXXXXXSSDLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ GTP+Y+APE +QP + D W F + EML G
Sbjct: 166 GMCKENIWDGVTTKXF---CGTPDYIAPEIIAYQPYGKS-----VDWWAFGVLLYEMLAG 217
Query: 126 VQPRCGRSVDEIYDAVVRRQEIPP 149
P G DE++ +++ P
Sbjct: 218 QAPFEGEDEDELFQSIMEHNVAYP 241
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 8/140 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y +LA + LHS GI+ +LKP N +L+E L D +
Sbjct: 132 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF---C 188
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GT YMAPE RG D W F + EMLTG P G+ E +++ +
Sbjct: 189 GTVEYMAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK-- 243
Query: 148 PPIPSGLPPAVENVLLGCFE 167
+P L P +++L F+
Sbjct: 244 LGMPQFLSPEAQSLLRMLFK 263
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 8/140 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y +LA + LHS GI+ +LKP N +L+E L D +
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF---C 187
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GT YMAPE RG D W F + EMLTG P G+ E +++ +
Sbjct: 188 GTVEYMAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK-- 242
Query: 148 PPIPSGLPPAVENVLLGCFE 167
+P L P +++L F+
Sbjct: 243 LGMPQFLSPEAQSLLRMLFK 262
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 1 MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
M++ G GD M ++ GK YA +++ G+ LH +GI+ +LK N +L+
Sbjct: 99 MEYVNG--GDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSE 156
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGFAC 117
+ D + + GTP+Y+APE +QP + D W +
Sbjct: 157 GHIKIADFGMCKEHMMDGVTTREF---CGTPDYIAPEIIAYQPYGKS-----VDWWAYGV 208
Query: 118 SIIEMLTGVQPRCGRSVDEIYDAVVRR 144
+ EML G P G DE++ +++
Sbjct: 209 LLYEMLAGQPPFDGEDEDELFQSIMEH 235
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 9/166 (5%)
Query: 9 GDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
GD +L K + +V Y +LA + LHS GI+ +LKP N +L+E L D
Sbjct: 111 GDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDF 170
Query: 68 XXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
+ GT YMAPE RG D W F + EMLTG
Sbjct: 171 GLSKESIDHEKKAYSF---CGTVEYMAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTL 224
Query: 128 PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
P G+ E +++ + +P L P +++L F+ + +R
Sbjct: 225 PFQGKDRKETMTMILKAK--LGMPQFLSPEAQSLLRMLFKRNPANR 268
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 9/160 (5%)
Query: 9 GDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
GD +L K + +V Y +LA G+ LHS GI+ +LKP N +L+E L D
Sbjct: 115 GDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDF 174
Query: 68 XXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
+ GT YMAPE R S D W + + EMLTG
Sbjct: 175 GLSKEAIDHEKKAYSF---CGTVEYMAPEVVN---RQGHSHSADWWSYGVLMFEMLTGSL 228
Query: 128 PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFE 167
P G+ E +++ + +P L +++L F+
Sbjct: 229 PFQGKDRKETMTLILKAK--LGMPQFLSTEAQSLLRALFK 266
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y + G LH ++ +LK N LNE +GD L
Sbjct: 122 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL---C 178
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTPNY+APE + SFE D W C + +L G P + E Y + + +
Sbjct: 179 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 234
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
IP + P +++ + D +RP + ++L
Sbjct: 235 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y + G LH ++ +LK N LNE +GD L
Sbjct: 122 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL---C 178
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTPNY+APE + SFE D W C + +L G P + E Y + + +
Sbjct: 179 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 234
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
IP + P +++ + D +RP + ++L
Sbjct: 235 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y + G LH ++ +LK N LNE +GD L
Sbjct: 126 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL---C 182
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTPNY+APE + SFE D W C + +L G P + E Y + + +
Sbjct: 183 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 238
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
IP + P +++ + D +RP + ++L
Sbjct: 239 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Query: 34 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 93
QG+ LH+ ++ +LK N LN+ +GD DL GTPNY+
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL---CGTPNYI 209
Query: 94 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 153
APE + SFE D W C + +L G P + E Y + + + +P
Sbjct: 210 APEVL---CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRH 264
Query: 154 LPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ P ++ D RP + ++L
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Query: 34 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 93
QG+ LH+ ++ +LK N LN+ +GD DL GTPNY+
Sbjct: 137 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL---CGTPNYI 193
Query: 94 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 153
APE + SFE D W C + +L G P + E Y + + + +P
Sbjct: 194 APEVL---CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRH 248
Query: 154 LPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ P ++ D RP + ++L
Sbjct: 249 INPVASALIRRMLHADPTLRPSVAELL 275
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y + G LH ++ +LK N LNE +GD L
Sbjct: 120 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL---C 176
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTPNY+APE + SFE D W C + +L G P + E Y + + +
Sbjct: 177 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 232
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
IP + P +++ + D +RP + ++L
Sbjct: 233 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 14/170 (8%)
Query: 23 SNVFRYAIDLAQGILQLHSKGILV----LNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 78
S ++A+D+A+G+ LH+ L+ LN + + R + DV
Sbjct: 111 SQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKF--------- 161
Query: 79 XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY 138
S P R+ P ++APE Q + D W FA + E++T P S EI
Sbjct: 162 -SFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG 220
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN 188
V P IP G+ P V ++ C D RP I+ + + Q+
Sbjct: 221 MKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y + G LH ++ +LK N LNE +GD L
Sbjct: 144 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL---C 200
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTPNY+APE + SFE D W C + +L G P + E Y + + +
Sbjct: 201 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 256
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
IP + P +++ + D +RP + ++L
Sbjct: 257 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y + G LH ++ +LK N LNE +GD L
Sbjct: 146 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL---C 202
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTPNY+APE + SFE D W C + +L G P + E Y + + +
Sbjct: 203 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 258
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
IP + P +++ + D +RP + ++L
Sbjct: 259 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 10/174 (5%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G ++ D Q + H GI+ ++KP N +++ + + D
Sbjct: 111 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
+ +GT Y++PEQ + + + +D + C + E+LTG P G S D +
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSV 227
Query: 138 YDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 184
VR IPP GL ++ V+L + +R + D++RV
Sbjct: 228 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXX-XXXXXX 78
+S ++V R + +G+ LH I+ L+LKP N +L+ LGD+
Sbjct: 128 VSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSI--YPLGDIKIVDFGMSRKIG 185
Query: 79 XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY 138
+ +L +GTP Y+APE + PI+ TD W +LT P G E Y
Sbjct: 186 HACELREIMGTPEYLAPEILNYD---PITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY 242
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 34 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 93
QG+ LH+ ++ +LK N LN+ +GD L GTPNY+
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL---CGTPNYI 209
Query: 94 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 153
APE + SFE D W C + +L G P + E Y + + + +P
Sbjct: 210 APEVL---CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRH 264
Query: 154 LPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ P ++ D RP + ++L
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 34 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 93
QG+ LH+ ++ +LK N LN+ +GD L GTPNY+
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL---CGTPNYI 209
Query: 94 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 153
APE + SFE D W C + +L G P + E Y + + + +P
Sbjct: 210 APEVL---CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRH 264
Query: 154 LPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ P ++ D RP + ++L
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y +++ + LH KGI+ +LKP N +LN L D +
Sbjct: 126 YLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF---C 182
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-RQE 146
GT YMAPE +R + D W + +MLTG P G + + D +++ +
Sbjct: 183 GTIEYMAPEIL---MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 147 IPP 149
+PP
Sbjct: 240 LPP 242
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 71/187 (37%), Gaps = 14/187 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILV----LNLKPFNFILNEADR 61
GS+ + + + + S ++A+D A+G LH+ L+ LN + + R
Sbjct: 94 GSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTAR 153
Query: 62 AVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE 121
DV S P R P ++APE Q + D W FA + E
Sbjct: 154 ISXADVKF----------SFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWE 203
Query: 122 MLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
++T P S EI V P IP G+ P V + C D RP I+
Sbjct: 204 LVTREVPFADLSNXEIGXKVALEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVP 263
Query: 182 VFKSSQN 188
+ + Q+
Sbjct: 264 ILEKXQD 270
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y +++ + LH KGI+ +LKP N +LN L D +
Sbjct: 126 YLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXF---C 182
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-RQE 146
GT YMAPE +R + D W + +MLTG P G + + D +++ +
Sbjct: 183 GTIEYMAPEIL---MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 147 IPP 149
+PP
Sbjct: 240 LPP 242
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 16/186 (8%)
Query: 16 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 75
K G L S + ++ +G+ LH G + ++K N +L E + D
Sbjct: 114 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 173
Query: 76 XXXXSSDLPRR--LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS 133
+ + R+ +GTP +MAPE + +VRG F+ D W F + IE+ TG P
Sbjct: 174 GGDITRNKVRKTFVGTPCWMAPEVME-QVRG-YDFKADIWSFGITAIELATGAAPYHKYP 231
Query: 134 VDEIYDAVVRRQEIPPIPSGLP---------PAVENVLLGCFEYDLRSRPLMTDILR--V 182
++ + + + P + +G+ + ++ C + D RP ++LR
Sbjct: 232 PMKVL-MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 290
Query: 183 FKSSQN 188
F+ ++N
Sbjct: 291 FQKAKN 296
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
YA ++ + LHSK I+ +LKP N +L++ + D D+ L
Sbjct: 111 YAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV-------PDVTYXL 163
Query: 88 -GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ- 145
GTP+Y+APE + P + D W F I EML G P + + Y+ ++ +
Sbjct: 164 CGTPDYIAPEVVSTK---PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL 220
Query: 146 EIPPI 150
PP
Sbjct: 221 RFPPF 225
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 14/177 (7%)
Query: 16 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 75
K G L S + ++ +G+ LH G + ++K N +L E + D
Sbjct: 109 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 168
Query: 76 XXXXSSDLPRR--LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS 133
+ + R+ +GTP +MAPE + +VRG F+ D W F + IE+ TG P
Sbjct: 169 GGDITRNKVRKTFVGTPCWMAPEVME-QVRG-YDFKADIWSFGITAIELATGAAPYHKYP 226
Query: 134 VDEIYDAVVRRQEIPPIPSGLP---------PAVENVLLGCFEYDLRSRPLMTDILR 181
++ + + + P + +G+ + ++ C + D RP ++LR
Sbjct: 227 PMKVL-MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 11/195 (5%)
Query: 3 FYEGSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
F G++ + + +LK G L+ + + + +G+ +H+KG +LKP N +L +
Sbjct: 112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG 171
Query: 61 RAVLGDVXXXXXXXXXXXXS------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG 114
+ VL D+ S D + T +Y APE + + I TD W
Sbjct: 172 QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWS 231
Query: 115 FACSIIEMLTGVQPR--CGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 172
C + M+ G P + D + AV + IP P A+ +L D
Sbjct: 232 LGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRH-SSALWQLLNSMMTVDPHQ 290
Query: 173 RPLMTDILRVFKSSQ 187
RP + +L ++ Q
Sbjct: 291 RPHIPLLLSQLEALQ 305
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14 QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
Q++ L L+++ YA L+ + L SK + ++ N +++ D LGD
Sbjct: 107 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166
Query: 74 XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
+ LP + +MAPE I+F +D W F + E+L
Sbjct: 167 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 213
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
GV+P G +++ + + +P +P PP + +++ C+ YD RP T++
Sbjct: 214 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 10/174 (5%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G ++ D Q + H GI+ ++KP N +++ + + D
Sbjct: 128 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 187
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
+ +GT Y++PEQ + + + +D + C + E+LTG P G S +
Sbjct: 188 NSVTQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 244
Query: 138 YDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 184
VR IPP GL ++ V+L + +R + D++RV
Sbjct: 245 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 298
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14 QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
Q++ L L+++ YA L+ + L SK + ++ N +++ D LGD
Sbjct: 105 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 164
Query: 74 XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
+ LP + +MAPE I+F +D W F + E+L
Sbjct: 165 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 211
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
GV+P G +++ + + +P +P PP + +++ C+ YD RP T++
Sbjct: 212 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 265
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14 QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
Q++ L L+++ YA L+ + L SK + ++ N +++ D LGD
Sbjct: 102 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM 161
Query: 74 XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
+ LP + +MAPE I+F +D W F + E+L
Sbjct: 162 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 208
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
GV+P G +++ + + +P +P PP + +++ C+ YD RP T++
Sbjct: 209 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14 QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
Q++ L L+++ YA L+ + L SK + ++ N +++ D LGD
Sbjct: 130 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 189
Query: 74 XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
+ LP + +MAPE I+F +D W F + E+L
Sbjct: 190 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 236
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
GV+P G +++ + + +P +P PP + +++ C+ YD RP T++
Sbjct: 237 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 290
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
YA ++ G+ LH + I+ +LKP N +L++ + D+ + R+
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDL----GLAVHVPEGQTIKGRV 346
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT YMAPE + E +F D W C + EM+ G P
Sbjct: 347 GTVGYMAPEVVKNER---YTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
YA ++ G+ LH + I+ +LKP N +L++ + D+ + R+
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDL----GLAVHVPEGQTIKGRV 346
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT YMAPE + E +F D W C + EM+ G P
Sbjct: 347 GTVGYMAPEVVKNER---YTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 10/174 (5%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G ++ D Q + H GI+ ++KP N +++ + + D
Sbjct: 111 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
+ +GT Y++PEQ + + + +D + C + E+LTG P G S +
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
Query: 138 YDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 184
VR IPP GL ++ V+L + +R + D++RV
Sbjct: 228 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14 QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
Q++ L L+++ YA L+ + L SK + ++ N +++ D LGD
Sbjct: 104 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 163
Query: 74 XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
+ LP + +MAPE I+F +D W F + E+L
Sbjct: 164 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 210
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
GV+P G +++ + + +P +P PP + +++ C+ YD RP T++
Sbjct: 211 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 264
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 10/174 (5%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G ++ D Q + H GI+ ++KP N +++ + + D
Sbjct: 111 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
+ +GT Y++PEQ + + + +D + C + E+LTG P G S +
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
Query: 138 YDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 184
VR IPP GL ++ V+L + +R + D++RV
Sbjct: 228 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 10/174 (5%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G ++ D Q + H GI+ ++KP N +++ + + D
Sbjct: 111 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
+ +GT Y++PEQ + + + +D + C + E+LTG P G S +
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
Query: 138 YDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 184
VR IPP GL ++ V+L + +R + D++RV
Sbjct: 228 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14 QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
Q++ L L+++ YA L+ + L SK + ++ N +++ D LGD
Sbjct: 99 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 158
Query: 74 XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
+ LP + +MAPE I+F +D W F + E+L
Sbjct: 159 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 205
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
GV+P G +++ + + +P +P PP + +++ C+ YD RP T++
Sbjct: 206 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 259
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14 QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
Q++ L L+++ YA L+ + L SK + ++ N +++ D LGD
Sbjct: 102 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 74 XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
+ LP + +MAPE I+F +D W F + E+L
Sbjct: 162 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 208
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
GV+P G +++ + + +P +P PP + +++ C+ YD RP T++
Sbjct: 209 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14 QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
Q++ L L+++ YA L+ + L SK + ++ N +++ D LGD
Sbjct: 102 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 74 XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
+ LP + +MAPE I+F +D W F + E+L
Sbjct: 162 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 208
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
GV+P G +++ + + +P +P PP + +++ C+ YD RP T++
Sbjct: 209 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 14 QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
Q++ L L+++ YA L+ + L SK + ++ N +++ D LGD
Sbjct: 102 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 74 XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
+ LP + +MAPE I+F +D W F + E+L
Sbjct: 162 EDSTXXKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 208
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
GV+P G +++ + + +P +P PP + +++ C+ YD RP T++
Sbjct: 209 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 15/166 (9%)
Query: 17 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 76
G L + V+ Y D + LHS+G++ L++KP N L R LGD
Sbjct: 151 GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210
Query: 77 XXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ-PRCGRSVD 135
+ G P YMAPE Q G D + +I+E+ ++ P G
Sbjct: 211 GAGEV----QEGDPRYMAPELLQ----GSYGTAADVFSLGLTILEVACNMELPHGGEGWQ 262
Query: 136 EIYDAVVRRQEIPP-IPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ R+ +PP +GL + +VL+ E D + R +L
Sbjct: 263 QL-----RQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALL 303
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 80 SSDLPRRLGTPNYMAPEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
++D + LG N + P +W PE + G S ++D W + + E+ + G+QP CG S
Sbjct: 180 AADYYKLLG--NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 237
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
++ + ++R +++ P P P V +++ C+ RP DI
Sbjct: 238 DVVE-MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 29 AIDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
A D+A+G+ LH++ I+ NLK N ++++ + D S
Sbjct: 143 AYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA--- 199
Query: 87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
GTP +MAPE + E P + ++D + F + E+ T QP + ++ AV + +
Sbjct: 200 AGTPEWMAPEVLRDE---PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK 256
Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
IP L P V ++ GC+ + RP I+ + +
Sbjct: 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14 QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
Q++ L L+++ YA L+ + L SK + ++ N +++ D LGD
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM 541
Query: 74 XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
+ LP + +MAPE I+F +D W F + E+L
Sbjct: 542 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 588
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
GV+P G +++ + + +P +P PP + +++ C+ YD RP T++
Sbjct: 589 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 80 SSDLPRRLGTPNYMAPEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
++D + LG N + P +W PE + G S ++D W + + E+ + G+QP CG S
Sbjct: 197 AADYYKLLG--NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 254
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
++ + ++R +++ P P P V +++ C+ RP DI
Sbjct: 255 DVVE-MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G S +++ YA ++ G+ +H++ ++ +LKP N +L+E + D+
Sbjct: 286 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 345
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSVDE 136
+S +GT YMAPE Q V S D + C + ++L G P R ++ D+
Sbjct: 346 PHAS-----VGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSPFRQHKTKDK 398
Query: 137 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
+ +P P + ++L G + D+ R
Sbjct: 399 HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 435
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G S +++ YA ++ G+ +H++ ++ +LKP N +L+E + D+
Sbjct: 287 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSVDE 136
+S +GT YMAPE Q V S D + C + ++L G P R ++ D+
Sbjct: 347 PHAS-----VGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
Query: 137 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
+ +P P + ++L G + D+ R
Sbjct: 400 HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
M+F +G ++ D ++Q++ + ++ V + Q + LH++G++ ++K + +L
Sbjct: 121 MEFLQGGALTDIVSQVRLNEEQIATVCEAVL---QALAYLHAQGVIHRDIKSDSILLTLD 177
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
R L D S D+P+R +GTP +MAPE R + E D W
Sbjct: 178 GRVKLSDFGFCAQI------SKDVPKRKXLVGTPYWMAPEVIS---RSLYATEVDIWSLG 228
Query: 117 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 149
+IEM+ G P D A+ R ++ PP
Sbjct: 229 IMVIEMVDGEPPYFS---DSPVQAMKRLRDSPP 258
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G S +++ YA ++ G+ +H++ ++ +LKP N +L+E + D+
Sbjct: 287 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSVDE 136
+S +GT YMAPE Q V S D + C + ++L G P R ++ D+
Sbjct: 347 PHAS-----VGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
Query: 137 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
+ +P P + ++L G + D+ R
Sbjct: 400 HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G S +++ YA ++ G+ +H++ ++ +LKP N +L+E + D+
Sbjct: 287 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSVDE 136
+S +GT YMAPE Q V S D + C + ++L G P R ++ D+
Sbjct: 347 PHAS-----VGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
Query: 137 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
+ +P P + ++L G + D+ R
Sbjct: 400 HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 68/174 (39%), Gaps = 10/174 (5%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G ++ D Q + H GI+ ++KP N +++ + + D
Sbjct: 111 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSG 170
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
+GT Y++PEQ + + + +D + C + E+LTG P G S +
Sbjct: 171 NSVXQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
Query: 138 YDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 184
VR IPP GL ++ V+L + +R + D++RV
Sbjct: 228 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14 QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
Q++ L L+++ YA L+ + L SK + ++ N +++ D LGD
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541
Query: 74 XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
+ LP + +MAPE I+F +D W F + E+L
Sbjct: 542 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 588
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
GV+P G +++ + + +P +P PP + +++ C+ YD RP T++
Sbjct: 589 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 60/156 (38%), Gaps = 8/156 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV-LGDVXXXXXXXXXXXXSSDLPRR 86
Y + +G+ LH I+ ++K N ++N + + D +
Sbjct: 127 YTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF--- 183
Query: 87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEIYDAVVRR 144
GT YMAPE RG D W C+IIEM TG P G ++ + +
Sbjct: 184 TGTLQYMAPEIIDKGPRG-YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK 242
Query: 145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P IP + + +L CFE D R D+L
Sbjct: 243 VH-PEIPESMSAEAKAFILKCFEPDPDKRACANDLL 277
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 68/185 (36%), Gaps = 21/185 (11%)
Query: 12 MAQLKGGKLSL-------------SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE 58
M Q+ GG LS + Y + +G+ LH I+ ++K N ++N
Sbjct: 84 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT 143
Query: 59 ADRAV-LGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFAC 117
+ + D + GT YMAPE RG D W C
Sbjct: 144 YSGVLKISDFGTSKRLAGINPCTETF---TGTLQYMAPEIIDKGPRG-YGKAADIWSLGC 199
Query: 118 SIIEMLTGVQP--RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
+IIEM TG P G ++ + + P IP + + +L CFE D R
Sbjct: 200 TIIEMATGKPPFYELGEPQAAMFKVGMFKVH-PEIPESMSAEAKAFILKCFEPDPDKRAC 258
Query: 176 MTDIL 180
D+L
Sbjct: 259 ANDLL 263
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 15/188 (7%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVL---NLKPFNFILN 57
M+F G +R+ L G ++ + +A+ +A+G+ LH + I+ + +LK N ++
Sbjct: 85 MEFARGGPLNRV--LSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILIL 142
Query: 58 EADRAVLGDVXXXXXXXXXXXXSSDLPRRL-----GTPNYMAPEQWQPEVRGPISFETDS 112
+ + GD+ + + R G +MAPE + + S +D
Sbjct: 143 Q--KVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASM---FSKGSDV 197
Query: 113 WGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 172
W + + E+LTG P G + V + PIPS P ++ C+ D S
Sbjct: 198 WSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHS 257
Query: 173 RPLMTDIL 180
RP T+IL
Sbjct: 258 RPSFTNIL 265
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 5/127 (3%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GSV D + KG L + ++ +G+ LH ++ ++K N +L E L
Sbjct: 112 GSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLV 171
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGFACSIIEML 123
D + +GTP +MAPE F++D W + IEM
Sbjct: 172 DFGVSAQLDRTVGRRNTF---IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228
Query: 124 TGVQPRC 130
G P C
Sbjct: 229 EGAPPLC 235
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 12/172 (6%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+L LS + A +A G++ L S+ + +L N ++ +GD
Sbjct: 128 GELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVY--- 184
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRS 133
S+D R G + M P +W P + + E+D W F + E+ T G QP S
Sbjct: 185 --STDYYRVGG--HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 240
Query: 134 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 185
E+ + + + + + P P V +V+LGC++ + + R + +I ++ +
Sbjct: 241 NTEVIECITQGRVLER-PRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHA 291
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
M+F EG ++ D + + + ++ V + + Q + LH++G++ ++K + +L
Sbjct: 100 MEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHD 156
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
R L D S ++PRR +GTP +MAPE R P E D W
Sbjct: 157 GRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLG 207
Query: 117 CSIIEMLTGVQP 128
+IEM+ G P
Sbjct: 208 IMVIEMVDGEPP 219
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
M+F EG ++ D + + + ++ V + + Q + LH++G++ ++K + +L
Sbjct: 105 MEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHD 161
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
R L D S ++PRR +GTP +MAPE R P E D W
Sbjct: 162 GRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLG 212
Query: 117 CSIIEMLTGVQP 128
+IEM+ G P
Sbjct: 213 IMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
M+F EG G + +++ + + + Q + LH++G++ ++K + +L
Sbjct: 107 MEFLEG--GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 164
Query: 61 RAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFAC 117
R L D S ++PRR +GTP +MAPE R P E D W
Sbjct: 165 RVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLGI 215
Query: 118 SIIEMLTGVQP 128
+IEM+ G P
Sbjct: 216 MVIEMVDGEPP 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
M+F EG ++ D + + + ++ V + + Q + LH++G++ ++K + +L
Sbjct: 96 MEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHD 152
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
R L D S ++PRR +GTP +MAPE R P E D W
Sbjct: 153 GRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLG 203
Query: 117 CSIIEMLTGVQP 128
+IEM+ G P
Sbjct: 204 IMVIEMVDGEPP 215
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
M+F EG G + +++ + + + Q + LH++G++ ++K + +L
Sbjct: 227 MEFLEG--GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 284
Query: 61 RAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFAC 117
R L D S ++PRR +GTP +MAPE R P E D W
Sbjct: 285 RVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLGI 335
Query: 118 SIIEMLTGVQP 128
+IEM+ G P
Sbjct: 336 MVIEMVDGEPP 346
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
M+F EG ++ D + + + ++ V + + Q + LH++G++ ++K + +L
Sbjct: 150 MEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHD 206
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
R L D S ++PRR +GTP +MAPE R P E D W
Sbjct: 207 GRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLG 257
Query: 117 CSIIEMLTGVQP 128
+IEM+ G P
Sbjct: 258 IMVIEMVDGEPP 269
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 9 GDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
GD M + + KL + Y+ +++ + LH +GI+ +LK N +L+ L D
Sbjct: 138 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 197
Query: 68 XXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
+S GTPNY+APE + E G F D W + EM+ G
Sbjct: 198 GMCKEGLRPGDTTSTF---CGTPNYIAPEILRGEDYG---FSVDWWALGVLMFEMMAGRS 251
Query: 128 P 128
P
Sbjct: 252 P 252
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 8/163 (4%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSL-SNVFRYAI-DLAQGILQLHSKGILVLNLKPFNFILNE 58
M +Y G GD + L + L ++ R+ I ++ I +H + ++KP N +L+
Sbjct: 153 MDYYVG--GDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV 210
Query: 59 ADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISF--ETDSWGFA 116
L D S + +GTP+Y++PE Q G + E D W
Sbjct: 211 NGHIRLADFGSCLKMNDDGTVQSSVA--VGTPDYISPEILQAMEDGMGKYGPECDWWSLG 268
Query: 117 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE 159
+ EML G P S+ E Y ++ +E PS + E
Sbjct: 269 VCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSE 311
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 9 GDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
GD M + + KL + Y+ +++ + LH +GI+ +LK N +L+ L D
Sbjct: 95 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 154
Query: 68 XXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
+S GTPNY+APE + E G F D W + EM+ G
Sbjct: 155 GMCKEGLRPGDTTSXF---CGTPNYIAPEILRGEDYG---FSVDWWALGVLMFEMMAGRS 208
Query: 128 P 128
P
Sbjct: 209 P 209
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 9 GDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
GD M + + KL + Y+ +++ + LH +GI+ +LK N +L+ L D
Sbjct: 106 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 165
Query: 68 XXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
+S GTPNY+APE + E G F D W + EM+ G
Sbjct: 166 GMCKEGLRPGDTTSXF---CGTPNYIAPEILRGEDYG---FSVDWWALGVLMFEMMAGRS 219
Query: 128 P 128
P
Sbjct: 220 P 220
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 9 GDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
GD M + + KL + Y+ +++ + LH +GI+ +LK N +L+ L D
Sbjct: 91 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 150
Query: 68 XXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
+S GTPNY+APE + E G F D W + EM+ G
Sbjct: 151 GMCKEGLRPGDTTSXF---CGTPNYIAPEILRGEDYG---FSVDWWALGVLMFEMMAGRS 204
Query: 128 P 128
P
Sbjct: 205 P 205
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
M+F EG ++ D + + + ++ V + + + + LH++G++ ++K + +L
Sbjct: 121 MEFLEGGALTDIVTHTRMNEEQIATV---CLSVLRALSYLHNQGVIHRDIKSDSILLTSD 177
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
R L D S ++P+R +GTP +MAPE R P E D W
Sbjct: 178 GRIKLSDFGFCAQV------SKEVPKRKXLVGTPYWMAPEVIS---RLPYGTEVDIWSLG 228
Query: 117 CSIIEMLTGVQP 128
+IEM+ G P
Sbjct: 229 IMVIEMIDGEPP 240
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 8/163 (4%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSL-SNVFRYAI-DLAQGILQLHSKGILVLNLKPFNFILNE 58
M +Y G GD + L + L ++ R+ I ++ I +H + ++KP N +L+
Sbjct: 169 MDYYVG--GDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV 226
Query: 59 ADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISF--ETDSWGFA 116
L D S + +GTP+Y++PE Q G + E D W
Sbjct: 227 NGHIRLADFGSCLKMNDDGTVQSSVA--VGTPDYISPEILQAMEDGMGKYGPECDWWSLG 284
Query: 117 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE 159
+ EML G P S+ E Y ++ +E PS + E
Sbjct: 285 VCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSE 327
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 6 GSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
GS+ DR++ L G LS + A A GI LH + ++K N +L+EA A +
Sbjct: 115 GSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKI 174
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
D R +GT YMAPE +RG I+ ++D + F ++E++T
Sbjct: 175 SDFGLARASEKFAQTVM-XSRIVGTTAYMAPEA----LRGEITPKSDIYSFGVVLLEIIT 229
Query: 125 GV 126
G+
Sbjct: 230 GL 231
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 68/171 (39%), Gaps = 13/171 (7%)
Query: 1 MKFYEGSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE 58
M++Y G GD + L G ++ Y ++ I +H G + ++KP N +L+
Sbjct: 140 MEYYVG--GDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDR 197
Query: 59 ADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISF----ETDSWG 114
L D S + +GTP+Y++PE Q GP + E D W
Sbjct: 198 CGHIRLADFGSCLKLRADGTVRSLVA--VGTPDYLSPEILQAVGGGPGTGSYGPECDWWA 255
Query: 115 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE---IPPIPSGLPPAVENVL 162
EM G P S E Y +V +E +P + G+P + +
Sbjct: 256 LGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFI 306
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 29 AIDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
A D+A+G+ LH++ I+ +LK N ++++ + D S
Sbjct: 143 AYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSK---XA 199
Query: 87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
GTP +MAPE + E P + ++D + F + E+ T QP + ++ AV + +
Sbjct: 200 AGTPEWMAPEVLRDE---PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK 256
Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
IP L P V ++ GC+ + RP I+ + +
Sbjct: 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 6 GSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
GS+ DR++ L G LS + A A GI LH + ++K N +L+EA A +
Sbjct: 115 GSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKI 174
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
D R +GT YMAPE +RG I+ ++D + F ++E++T
Sbjct: 175 SDFGLARASEKFAQTVM-XXRIVGTTAYMAPEA----LRGEITPKSDIYSFGVVLLEIIT 229
Query: 125 GV 126
G+
Sbjct: 230 GL 231
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 6 GSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
GS+ DR++ L G LS + A A GI LH + ++K N +L+EA A +
Sbjct: 109 GSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKI 168
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
D R +GT YMAPE +RG I+ ++D + F ++E++T
Sbjct: 169 SDFGLARASEKFAQXVM-XXRIVGTTAYMAPEA----LRGEITPKSDIYSFGVVLLEIIT 223
Query: 125 GV 126
G+
Sbjct: 224 GL 225
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEA 59
M+ +G D++ + K G++ + + +I + +G+ L K I+ ++KP N ++N
Sbjct: 86 MEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 144
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
L D +GT +YM+PE+ Q S ++D W S+
Sbjct: 145 GEIKLCDFGVSGQLIDEMAN-----EFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSL 196
Query: 120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 158
+EM G PR ++ E+ D +V E PP LP AV
Sbjct: 197 VEMAVGRYPRPPMAIFELLDYIV--NEPPP---KLPSAV 230
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ I +H + ++KP N +++ L D S + +
Sbjct: 180 YLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA--V 237
Query: 88 GTPNYMAPEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ 145
GTP+Y++PE Q G + E D W + EML G P S+ E Y ++ +
Sbjct: 238 GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK 297
Query: 146 EIPPIPSGLPPAVEN 160
E P+ + EN
Sbjct: 298 ERFQFPTQVTDVSEN 312
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 91
+ G+L LHS GIL +L N +L + D L GTPN
Sbjct: 121 IITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL---CGTPN 177
Query: 92 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 142
Y++PE G E+D W C +L G P +V + VV
Sbjct: 178 YISPEIATRSAHG---LESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 26 FRYAIDLAQGI--LQLHSKGILVLNLKPFNFILNEADR--AVLGDVXXXXXXXXXXXXSS 81
R +D+A GI +Q + I+ +L+ N L D V V S
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVS 184
Query: 82 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI-YDA 140
L LG +MAPE E + + D++ FA + +LTG P S +I +
Sbjct: 185 GL---LGNFQWMAPETIGAEEES-YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240
Query: 141 VVRRQEI-PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
++R + + P IP PP + NV+ C+ D + RP + I++
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 26 FRYAIDLAQGI--LQLHSKGILVLNLKPFNFILNEADR--AVLGDVXXXXXXXXXXXXSS 81
R +D+A GI +Q + I+ +L+ N L D V V S
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVS 184
Query: 82 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI-YDA 140
L LG +MAPE E + + D++ FA + +LTG P S +I +
Sbjct: 185 GL---LGNFQWMAPETIGAEEES-YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240
Query: 141 VVRRQEI-PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
++R + + P IP PP + NV+ C+ D + RP + I++
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 26 FRYAIDLAQGI--LQLHSKGILVLNLKPFNFILNEADR--AVLGDVXXXXXXXXXXXXSS 81
R +D+A GI +Q + I+ +L+ N L D V V S
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVS 184
Query: 82 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI-YDA 140
L LG +MAPE E + + D++ FA + +LTG P S +I +
Sbjct: 185 GL---LGNFQWMAPETIGAEEES-YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240
Query: 141 VVRRQEI-PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
++R + + P IP PP + NV+ C+ D + RP + I++
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 6 GSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
GS+ DR++ L G LS + A A GI LH + ++K N +L+EA A +
Sbjct: 106 GSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKI 165
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
D R +GT Y APE +RG I+ ++D + F ++E++T
Sbjct: 166 SDFGLARASEKFAQXVX-XSRIVGTTAYXAPEA----LRGEITPKSDIYSFGVVLLEIIT 220
Query: 125 GV 126
G+
Sbjct: 221 GL 222
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 8/146 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LHS+ ++ ++K N +L++ + D + +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKTFC 166
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + G D WG + EM+ G P + + +++ ++ E
Sbjct: 167 GTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEE 221
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
P L P +++L G + D + R
Sbjct: 222 IRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 8/146 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LHS+ ++ ++K N +L++ + D + +
Sbjct: 113 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKTFC 169
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + G D WG + EM+ G P + + +++ ++ E
Sbjct: 170 GTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEE 224
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
P L P +++L G + D + R
Sbjct: 225 IRFPRTLSPEAKSLLAGLLKKDPKQR 250
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 8/146 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LHS+ ++ ++K N +L++ + D + +
Sbjct: 115 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFC 171
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + G D WG + EM+ G P + + +++ ++ E
Sbjct: 172 GTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEE 226
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
P L P +++L G + D + R
Sbjct: 227 IRFPRTLSPEAKSLLAGLLKKDPKQR 252
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 8/146 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LHS+ ++ ++K N +L++ + D + +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKTFC 166
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + G D WG + EM+ G P + + +++ ++ E
Sbjct: 167 GTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEE 221
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
P L P +++L G + D + R
Sbjct: 222 IRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 8/146 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LHS+ ++ ++K N +L++ + D + +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFC 166
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + G D WG + EM+ G P + + +++ ++ E
Sbjct: 167 GTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEE 221
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
P L P +++L G + D + R
Sbjct: 222 IRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 8/146 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LHS+ ++ ++K N +L++ + D + +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFC 166
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + G D WG + EM+ G P + + +++ ++ E
Sbjct: 167 GTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEE 221
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
P L P +++L G + D + R
Sbjct: 222 IRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 8/146 (5%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LHS+ ++ ++K N +L++ + D + +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFC 166
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + G D WG + EM+ G P + + +++ ++ E
Sbjct: 167 GTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEE 221
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
P L P +++L G + D + R
Sbjct: 222 IRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 12/166 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G L L + A +A G++ L + +L N ++ + +GD
Sbjct: 153 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY--- 209
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRS 133
S+D R G M P +W P + + E+D W F + E+ T G QP S
Sbjct: 210 --STDYYRVGG--RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS 265
Query: 134 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
E D + + +E+ P PP V ++ GC++ + + R + D+
Sbjct: 266 NTEAIDCITQGRELER-PRACPPEVYAIMRGCWQREPQQRHSIKDV 310
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 3/139 (2%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + +HS G + ++KP N +L+++ L D D +
Sbjct: 178 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--V 235
Query: 88 GTPNYMAPEQWQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
GTP+Y++PE + + G E D W + EML G P S+ Y ++ +
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN 295
Query: 147 IPPIPSGLPPAVENVLLGC 165
P + E L C
Sbjct: 296 SLTFPDDNDISKEAKNLIC 314
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 25/198 (12%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + +G K L + ++ +A+G+ + + + +L+ N +++ + +
Sbjct: 266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKI 325
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PEV--RGPISFETDSWGF 115
D L R + Y A P +W PE G + ++D W F
Sbjct: 326 ADFG--------------LARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 371
Query: 116 ACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
++E++T G P G S E+ A+ R +P P P + N+++ C++ RP
Sbjct: 372 GILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERP 430
Query: 175 LMTDILRVFKSSQNSVHS 192
I V + S
Sbjct: 431 TFEYIQSVLDDFYTATES 448
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 3/139 (2%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + +HS G + ++KP N +L+++ L D D +
Sbjct: 178 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--V 235
Query: 88 GTPNYMAPEQWQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
GTP+Y++PE + + G E D W + EML G P S+ Y ++ +
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN 295
Query: 147 IPPIPSGLPPAVENVLLGC 165
P + E L C
Sbjct: 296 SLTFPDDNDISKEAKNLIC 314
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 12/166 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G L L + A +A G++ L + +L N ++ + +GD
Sbjct: 124 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY--- 180
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRS 133
S+D R G M P +W P + + E+D W F + E+ T G QP S
Sbjct: 181 --STDYYRVGG--RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS 236
Query: 134 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
E D + + +E+ P PP V ++ GC++ + + R + D+
Sbjct: 237 NTEAIDCITQGRELER-PRACPPEVYAIMRGCWQREPQQRHSIKDV 281
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 3/139 (2%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + +HS G + ++KP N +L+++ L D D +
Sbjct: 173 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--V 230
Query: 88 GTPNYMAPEQWQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
GTP+Y++PE + + G E D W + EML G P S+ Y ++ +
Sbjct: 231 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN 290
Query: 147 IPPIPSGLPPAVENVLLGC 165
P + E L C
Sbjct: 291 SLTFPDDNDISKEAKNLIC 309
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 12/166 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G L L + A +A G++ L + +L N ++ + +GD
Sbjct: 130 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY--- 186
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRS 133
S+D R G M P +W P + + E+D W F + E+ T G QP S
Sbjct: 187 --STDYYRVGG--RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS 242
Query: 134 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
E D + + +E+ P PP V ++ GC++ + + R + D+
Sbjct: 243 NTEAIDCITQGRELER-PRACPPEVYAIMRGCWQREPQQRHSIKDV 287
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 27/156 (17%)
Query: 9 GDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV--LGD 66
G + + KG KL ++ Y +++ + LHS G++ +LKP N +L E + LG
Sbjct: 168 GQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGA 227
Query: 67 VXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGV 126
V + GTP + APE VR + TD + ++ + +
Sbjct: 228 VSRI----------NSFGYLYGTPGFQAPEI----VRTGPTVATDIYTVGRTLAALTLDL 273
Query: 127 QPRCGRSVD---------EIYDAVVR--RQEIPPIP 151
R GR VD + YD+ R R+ I P P
Sbjct: 274 PTRNGRYVDGLPEDDPVLKTYDSYGRLLRRAIDPDP 309
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 81/196 (41%), Gaps = 28/196 (14%)
Query: 1 MKFYEGSVGDRMAQLKGGK----LSLSNVFRYAIDLAQGILQLHS---KGILVLNLKPFN 53
M++ EG G L G + + ++ + + +QG+ LHS K ++ +LKP N
Sbjct: 79 MEYAEG--GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 136
Query: 54 FILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSW 113
+L G V + + G+ +MAPE ++ S + D +
Sbjct: 137 LLLVAG-----GTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFE---GSNYSEKCDVF 188
Query: 114 GFACSIIEMLTGVQPRCGRSVDEIYDAVVR------RQEIPPIPSGLPPAVENVLLGCFE 167
+ + E++T +P DEI R PP+ LP +E+++ C+
Sbjct: 189 SWGIILWEVITRRKP-----FDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWS 243
Query: 168 YDLRSRPLMTDILRVF 183
D RP M +I+++
Sbjct: 244 KDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 81/196 (41%), Gaps = 28/196 (14%)
Query: 1 MKFYEGSVGDRMAQLKGGK----LSLSNVFRYAIDLAQGILQLHS---KGILVLNLKPFN 53
M++ EG G L G + + ++ + + +QG+ LHS K ++ +LKP N
Sbjct: 78 MEYAEG--GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135
Query: 54 FILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSW 113
+L G V + + G+ +MAPE ++ S + D +
Sbjct: 136 LLLVAG-----GTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFE---GSNYSEKCDVF 187
Query: 114 GFACSIIEMLTGVQPRCGRSVDEIYDAVVR------RQEIPPIPSGLPPAVENVLLGCFE 167
+ + E++T +P DEI R PP+ LP +E+++ C+
Sbjct: 188 SWGIILWEVITRRKP-----FDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWS 242
Query: 168 YDLRSRPLMTDILRVF 183
D RP M +I+++
Sbjct: 243 KDPSQRPSMEEIVKIM 258
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 79/180 (43%), Gaps = 25/180 (13%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + +GGK+ L + ++ +A+G+ + K + +L+ N +++E+ +
Sbjct: 92 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKI 151
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PEV--RGPISFETDSWGF 115
D L R + Y A P +W PE G + ++D W F
Sbjct: 152 ADFG--------------LARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSF 197
Query: 116 ACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
+ E++T G P GR+ ++ A+ + +P + P + +++ C++ RP
Sbjct: 198 GILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRV-ENCPDELYDIMKMCWKEKAEERP 256
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 79/189 (41%), Gaps = 25/189 (13%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + +G K L + ++ +A+G+ + + + +L+ N +++ + +
Sbjct: 93 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKI 152
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PEV--RGPISFETDSWGF 115
D L R + Y A P +W PE G + ++D W F
Sbjct: 153 ADF--------------GLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 198
Query: 116 ACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
++E++T G P G S E+ A+ R +P P P + N+++ C++ RP
Sbjct: 199 GILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERP 257
Query: 175 LMTDILRVF 183
I V
Sbjct: 258 TFEYIQSVL 266
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 3/125 (2%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + +HS G++ ++KP N +L++ L D D +
Sbjct: 179 YTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA--V 236
Query: 88 GTPNYMAPEQWQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
GTP+Y++PE + + G E D W + EML G P S+ Y ++ +
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKN 296
Query: 147 IPPIP 151
P
Sbjct: 297 SLCFP 301
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANSFV 195
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT Y++PE S +D W C I +++ G+ P
Sbjct: 196 GTAQYVSPELL---TEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 26/199 (13%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G++ D + + ++S + A ++ + L K + NL N ++ E +
Sbjct: 301 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVA 360
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFA 116
D L R + Y A P +W PE S ++D W F
Sbjct: 361 DF--------------GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 406
Query: 117 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
+ E+ T G+ P G + ++Y+ + + + P G P V ++ C++++ RP
Sbjct: 407 VLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPS 465
Query: 176 MTDILRVFKSS-QNSVHSD 193
+I + F++ Q S SD
Sbjct: 466 FAEIHQAFETMFQESSISD 484
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 93 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 145
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLT 124
++ SS GT +Y+ PE + G + E D W E L
Sbjct: 146 ELKIADFGWSVHAPSSRRTELCGTLDYLPPEM----IEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 202 GKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 60/168 (35%), Gaps = 22/168 (13%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y + G+ LH + I+ +LKP N +L++ + D+ +
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--- 350
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--Q 145
GTP +MAPE E F D + ++ EM+ P R + +R +
Sbjct: 351 GTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
Query: 146 EIPPIPSGLPPAVENVLLGCFEYD--------------LRSRPLMTDI 179
+ P PA ++ + D LR+ PL DI
Sbjct: 408 QAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 60/168 (35%), Gaps = 22/168 (13%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y + G+ LH + I+ +LKP N +L++ + D+ +
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--- 350
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--Q 145
GTP +MAPE E F D + ++ EM+ P R + +R +
Sbjct: 351 GTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
Query: 146 EIPPIPSGLPPAVENVLLGCFEYD--------------LRSRPLMTDI 179
+ P PA ++ + D LR+ PL DI
Sbjct: 408 QAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 60/168 (35%), Gaps = 22/168 (13%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y + G+ LH + I+ +LKP N +L++ + D+ +
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--- 350
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--Q 145
GTP +MAPE E F D + ++ EM+ P R + +R +
Sbjct: 351 GTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
Query: 146 EIPPIPSGLPPAVENVLLGCFEYD--------------LRSRPLMTDI 179
+ P PA ++ + D LR+ PL DI
Sbjct: 408 QAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 78/192 (40%), Gaps = 23/192 (11%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + +G K L + ++ +A+G+ + + + +L+ N +++ + +
Sbjct: 260 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKI 319
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIE 121
D R+G + APE G + ++D W F ++E
Sbjct: 320 ADFGLA---------------RVGAKFPIKWTAPEAIN---FGSFTIKSDVWSFGILLME 361
Query: 122 MLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++T G P G S E+ A+ R +P P P + N+++ C++ RP I
Sbjct: 362 IVTYGRIPYPGMSNPEVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQ 420
Query: 181 RVFKSSQNSVHS 192
V + S
Sbjct: 421 SVLDDFYTATES 432
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 95 PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 150
P +W PE S ++D W F + E+ T G+ P G + ++YD + + +
Sbjct: 194 PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQ- 252
Query: 151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 185
P G PP V ++ C+++ RP + + F++
Sbjct: 253 PEGCPPKVYELMRACWKWSPADRPSFAETHQAFET 287
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Query: 28 YAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
Y ++ + LHS K ++ +LK N +L++ + D + +
Sbjct: 253 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD---GATMKTF 309
Query: 87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
GTP Y+APE + G D WG + EM+ G P + +++++ ++ E
Sbjct: 310 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL--ME 364
Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSR 173
P L P +++L G + D + R
Sbjct: 365 EIRFPRTLGPEAKSLLSGLLKKDPKQR 391
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Query: 28 YAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
Y ++ + LHS K ++ +LK N +L++ + D + +
Sbjct: 256 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD---GATMKTF 312
Query: 87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
GTP Y+APE + G D WG + EM+ G P + +++++ ++ E
Sbjct: 313 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL--ME 367
Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSR 173
P L P +++L G + D + R
Sbjct: 368 EIRFPRTLGPEAKSLLSGLLKKDPKQR 394
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D +AQ + LS + + G+ LH+K I +LKP N +L + + +
Sbjct: 100 GELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ GTP ++APE E P+ E D W +L+G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 214
Query: 126 VQPRCGRSVDE 136
P G + E
Sbjct: 215 ASPFLGDTKQE 225
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 95 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 147
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLT 124
++ SS GT +Y+ PE + G + E D W E L
Sbjct: 148 ELKIANFGWSVHAPSSRRTTLCGTLDYLPPEM----IEGRMHDEKVDLWSLGVLCYEFLV 203
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 204 GKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 12/175 (6%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 93 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 145
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ SS GT +Y+ PE + + + D W E L G
Sbjct: 146 ELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVG 202
Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 203 KPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 12/175 (6%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 96 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 148
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ SS GT +Y+ PE + + + D W E L G
Sbjct: 149 ELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVG 205
Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 206 KPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 12/175 (6%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 97 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 149
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ SS GT +Y+ PE + + + D W E L G
Sbjct: 150 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVG 206
Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 207 KPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 259
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 60/168 (35%), Gaps = 22/168 (13%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y + G+ LH + I+ +LKP N +L++ + D+ +
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--- 350
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--Q 145
GTP +MAPE E F D + ++ EM+ P R + +R +
Sbjct: 351 GTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
Query: 146 EIPPIPSGLPPAVENVLLGCFEYD--------------LRSRPLMTDI 179
+ P PA ++ + D LR+ PL DI
Sbjct: 408 QAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 12/154 (7%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y +LA + HSK ++ ++KP N +L A G++ SS
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLC 172
Query: 88 GTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
GT +Y+ PE + G + E D W E L G P + E Y + R +
Sbjct: 173 GTLDYLPPEM----IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF 228
Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + +++ +++ RP++ ++L
Sbjct: 229 T--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 12/175 (6%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 93 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 145
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ SS GT +Y+ PE + + + D W E L G
Sbjct: 146 ELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVG 202
Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 203 KPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 12/154 (7%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y +LA + HSK ++ ++KP N +L A G++ SS
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRXXLX 172
Query: 88 GTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
GT +Y+ PE + G + E D W E L G P + E Y + R +
Sbjct: 173 GTLDYLPPEM----IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF 228
Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + +++ +++ RP++ ++L
Sbjct: 229 T--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 12/175 (6%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 98 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 150
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ SS GT +Y+ PE + + + D W E L G
Sbjct: 151 ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVG 207
Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 208 KPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 12/175 (6%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 98 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 150
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ SS GT +Y+ PE + + + D W E L G
Sbjct: 151 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVG 207
Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 208 KPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 93 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 145
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLT 124
++ SS GT +Y+ PE + G + E D W E L
Sbjct: 146 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM----IEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 202 GKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 12/175 (6%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 96 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 148
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ SS GT +Y+ PE + + + D W E L G
Sbjct: 149 ELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVG 205
Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 206 KPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 94 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 146
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLT 124
++ SS GT +Y+ PE + G + E D W E L
Sbjct: 147 ELKIADFGWSVHAPSSRRDTLCGTLDYLPPEM----IEGRMHDEKVDLWSLGVLCYEFLV 202
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 203 GKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 10/153 (6%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y +LA + HSK ++ ++KP N +L A G++ SS
Sbjct: 116 YITELANALSYCHSKRVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRAALC 170
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GT +Y+ PE + + + D W E L G P + E Y + R +
Sbjct: 171 GTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 227
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + +++ +++ RP++ ++L
Sbjct: 228 --FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 95 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 147
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLT 124
++ SS GT +Y+ PE + G + E D W E L
Sbjct: 148 ELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM----IEGRMHDEKVDLWSLGVLCYEFLV 203
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 204 GKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 96 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 148
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLT 124
++ SS GT +Y+ PE + G + E D W E L
Sbjct: 149 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM----IEGRMHDEKVDLWSLGVLCYEFLV 204
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 205 GKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 94 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 146
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLT 124
++ SS GT +Y+ PE + G + E D W E L
Sbjct: 147 ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM----IEGRMHDEKVDLWSLGVLCYEFLV 202
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 203 GKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 12/175 (6%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 92 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 144
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ SS GT +Y+ PE + + + D W E L G
Sbjct: 145 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVG 201
Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 202 KPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 254
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 12/175 (6%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 96 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 148
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ SS GT +Y+ PE + + + D W E L G
Sbjct: 149 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVG 205
Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 206 KPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
Query: 28 YAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
Y ++ + LHS K ++ +LK N +L++ + D + +
Sbjct: 114 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD---GATMKXF 170
Query: 87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
GTP Y+APE + G D WG + EM+ G P + +++++ ++ +E
Sbjct: 171 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL-MEE 226
Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSR 173
I P L P +++L G + D + R
Sbjct: 227 I-RFPRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D +AQ + LS + + G+ LH+K I +LKP N +L + + +
Sbjct: 100 GELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ GTP ++APE E P+ E D W +L+G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 214
Query: 126 VQPRCGRSVDE 136
P G + E
Sbjct: 215 ASPFLGDTKQE 225
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 12/175 (6%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 93 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 145
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ SS GT +Y+ PE + + + D W E L G
Sbjct: 146 ELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVG 202
Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 203 KPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 66/171 (38%), Gaps = 8/171 (4%)
Query: 13 AQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXX 72
AQ +G LS V + + HS+ ++ +LKP N + D + +
Sbjct: 114 AQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQ--DTSPHSPIKIIDF 171
Query: 73 XXXXXXXSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG 131
S + GT YMAPE ++ +V +F+ D W + +LTG P G
Sbjct: 172 GLAELFKSDEHSTNAAGTALYMAPEVFKRDV----TFKCDIWSAGVVMYFLLTGCLPFTG 227
Query: 132 RSVDEIYDAVVRRQEIPPIPSG-LPPAVENVLLGCFEYDLRSRPLMTDILR 181
S++E+ ++ + L P ++L D RP +L
Sbjct: 228 TSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Query: 28 YAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
Y ++ + LHS K ++ +LK N +L++ + D + +
Sbjct: 113 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD---GATMKXF 169
Query: 87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
GTP Y+APE + G D WG + EM+ G P + +++++ ++ E
Sbjct: 170 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL--ME 224
Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSR 173
P L P +++L G + D + R
Sbjct: 225 EIRFPRTLGPEAKSLLSGLLKKDPKQR 251
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 119 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 171
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLT 124
++ SS GT +Y+ PE + G + E D W E L
Sbjct: 172 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM----IEGRMHDEKVDLWSLGVLCYEFLV 227
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 228 GKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 110 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 162
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLT 124
++ SS GT +Y+ PE + G + E D W E L
Sbjct: 163 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM----IEGRMHDEKVDLWSLGVLCYEFLV 218
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 219 GKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 272
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D +AQ + LS + + G+ LH+K I +LKP N +L + + +
Sbjct: 100 GELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ GTP ++APE E P+ E D W +L+G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 214
Query: 126 VQPRCGRSVDE 136
P G + E
Sbjct: 215 ASPFLGDTKQE 225
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 13/135 (9%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD----R 61
G + D +A+ + L+ ++ + G+ LHSK I +LKP N +L + + R
Sbjct: 100 GELFDFLAEKES--LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR 157
Query: 62 AVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE 121
L D ++ GTP ++APE E P+ E D W
Sbjct: 158 IKLIDF----GIAHKIEAGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYI 210
Query: 122 MLTGVQPRCGRSVDE 136
+L+G P G + E
Sbjct: 211 LLSGASPFLGETKQE 225
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D +AQ + LS + + G+ LH+K I +LKP N +L + + +
Sbjct: 100 GELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ GTP ++APE E P+ E D W +L+G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 214
Query: 126 VQPRCGRSVDE 136
P G + E
Sbjct: 215 ASPFLGDTKQE 225
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 93 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 145
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLT 124
++ SS GT +Y+ PE + G + E D W E L
Sbjct: 146 ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM----IEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 202 GKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEA 59
M+ +G D++ + K G++ + + +I + +G+ L K I+ ++KP N ++N
Sbjct: 102 MEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 160
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
L D S +GT +YM+PE+ Q S ++D W S+
Sbjct: 161 GEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQGT---HYSVQSDIWSMGLSL 212
Query: 120 IEMLTGVQP----RCGRSVDEIYDAVVRRQEIPP-IPSGL 154
+EM G P ++ E+ D +V E PP +PSG+
Sbjct: 213 VEMAVGRYPIGSGSGSMAIFELLDYIV--NEPPPKLPSGV 250
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 21/167 (12%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 140 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFV 198
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GT Y++PE + S D W C I +++ G+ P + I+ +++ +
Sbjct: 199 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY- 254
Query: 148 PPIPSGLPPA----VENVL-------LGCFEYD----LRSRPLMTDI 179
P+ P VE +L LGC E + L++ P +
Sbjct: 255 -DFPAAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 300
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 12/175 (6%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 90 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 142
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ SS GT +Y+ PE + + + D W E L G
Sbjct: 143 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVG 199
Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 200 KPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 252
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 13/135 (9%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD----R 61
G + D +A+ + L+ ++ + G+ LHSK I +LKP N +L + + R
Sbjct: 93 GELFDFLAEKES--LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR 150
Query: 62 AVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE 121
L D ++ GTP ++APE E P+ E D W
Sbjct: 151 IKLIDF----GIAHKIEAGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYI 203
Query: 122 MLTGVQPRCGRSVDE 136
+L+G P G + E
Sbjct: 204 LLSGASPFLGETKQE 218
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
Query: 28 YAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
Y ++ + LHS K ++ +LK N +L++ + D + +
Sbjct: 115 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD---GATMKXF 171
Query: 87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
GTP Y+APE + G D WG + EM+ G P + +++++ ++ +E
Sbjct: 172 CGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL-MEE 227
Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSR 173
I P L P +++L G + D + R
Sbjct: 228 I-RFPRTLGPEAKSLLSGLLKKDPKQR 253
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D +AQ + LS + + G+ LH+K I +LKP N +L + + +
Sbjct: 100 GELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ GTP ++APE E P+ E D W +L+G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 214
Query: 126 VQPRCGRSVDE 136
P G + E
Sbjct: 215 ASPFLGDTKQE 225
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 13/135 (9%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD----R 61
G + D +A+ + L+ ++ + G+ LHSK I +LKP N +L + + R
Sbjct: 114 GELFDFLAEKES--LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR 171
Query: 62 AVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE 121
L D ++ GTP ++APE E P+ E D W
Sbjct: 172 IKLIDF----GIAHKIEAGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYI 224
Query: 122 MLTGVQPRCGRSVDE 136
+L+G P G + E
Sbjct: 225 LLSGASPFLGETKQE 239
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFV 195
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT Y++PE + S D W C I +++ G+ P
Sbjct: 196 GTAQYVSPELLTEKSAXKSS---DLWALGCIIYQLVAGLPP 233
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 12/175 (6%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 93 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 145
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ SS GT +Y+ PE + + + D W E L G
Sbjct: 146 ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVG 202
Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 203 KPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/190 (19%), Positives = 76/190 (40%), Gaps = 25/190 (13%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G++ D + + +++ + A ++ + L K + NL N ++ E +
Sbjct: 340 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVA 399
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFA 116
D L R + Y A P +W PE S ++D W F
Sbjct: 400 DF--------------GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 445
Query: 117 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
+ E+ T G+ P G + ++Y+ + + + P G P V ++ C++++ RP
Sbjct: 446 VLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPS 504
Query: 176 MTDILRVFKS 185
+I + F++
Sbjct: 505 FAEIHQAFET 514
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 12/175 (6%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 96 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 148
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ SS GT +Y+ PE + + + D W E L G
Sbjct: 149 ELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVG 205
Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 206 KPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 26/199 (13%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G++ D + + +++ + A ++ + L K + NL N ++ E +
Sbjct: 298 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVA 357
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFA 116
D L R + Y A P +W PE S ++D W F
Sbjct: 358 DF--------------GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 403
Query: 117 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
+ E+ T G+ P G + ++Y+ + + + P G P V ++ C++++ RP
Sbjct: 404 VLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPS 462
Query: 176 MTDILRVFKSS-QNSVHSD 193
+I + F++ Q S SD
Sbjct: 463 FAEIHQAFETMFQESSISD 481
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 119 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 171
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLT 124
++ SS GT +Y+ PE + G + E D W E L
Sbjct: 172 ELKIADFGWSVHAPSSRRDDLCGTLDYLPPEM----IEGRMHDEKVDLWSLGVLCYEFLV 227
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 228 GKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 60/161 (37%), Gaps = 12/161 (7%)
Query: 25 VFRYAIDLAQGILQLHSKG-----ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
V R L + + H + +L +LKP N L+ LGD
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF 172
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD 139
+ + +GTP YM+PEQ R + ++D W C + E+ + P S E+
Sbjct: 173 AKEF---VGTPYYMSPEQMN---RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL-A 225
Query: 140 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
+R + IP + ++ RP + +IL
Sbjct: 226 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFV 195
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT Y++PE + S D W C I +++ G+ P
Sbjct: 196 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 19/166 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NSFV 192
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GT Y++PE + S D W C I +++ G+ P + I+ +++ +
Sbjct: 193 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 249
Query: 148 PPIPSGLPPA---VENVL-------LGCFEYD----LRSRPLMTDI 179
P P A VE +L LGC E + L++ P +
Sbjct: 250 FP-EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 26/199 (13%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G++ D + + ++S + A ++ + L K + +L N ++ E +
Sbjct: 94 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFA 116
D L R + Y A P +W PE S ++D W F
Sbjct: 154 DF--------------GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 199
Query: 117 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
+ E+ T G+ P G + ++Y+ + + + P G P V ++ C++++ RP
Sbjct: 200 VLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPS 258
Query: 176 MTDILRVFKSS-QNSVHSD 193
+I + F++ Q S SD
Sbjct: 259 FAEIHQAFETMFQESSISD 277
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 19/166 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFV 192
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GT Y++PE + S D W C I +++ G+ P + I+ +++ +
Sbjct: 193 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 249
Query: 148 PPIPSGLPPA---VENVL-------LGCFEYD----LRSRPLMTDI 179
P P A VE +L LGC E + L++ P +
Sbjct: 250 FP-EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 8/139 (5%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + DR+A + K+S + V Y +G+ +H I+ L++KP N I+ E +A
Sbjct: 133 GELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPEN-IMCETKKA--S 188
Query: 66 DVXXXXXXXXXXXXSSDLPR-RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
V ++ + T + APE R P+ F TD W +L+
Sbjct: 189 SVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVD---REPVGFYTDMWAIGVLGYVLLS 245
Query: 125 GVQPRCGRSVDEIYDAVVR 143
G+ P G E V R
Sbjct: 246 GLSPFAGEDDLETLQNVKR 264
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 6/137 (4%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + DR+ L + + + +GI +H IL L+LKP N + D +
Sbjct: 171 GELFDRIIDESYNLTELDTIL-FMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIK 229
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L GTP ++APE + +SF TD W +L+G
Sbjct: 230 IIDFGLARRYKPREK--LKVNFGTPEFLAPEVVNYDF---VSFPTDMWSVGVIAYMLLSG 284
Query: 126 VQPRCGRSVDEIYDAVV 142
+ P G + E + ++
Sbjct: 285 LSPFLGDNDAETLNNIL 301
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 70/162 (43%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
+++ ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE ++ S ++D W + + E+ + G P G +DE +
Sbjct: 256 VRKGDTRLPL-KWMAPESIFDKI---YSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDF 311
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ +R P P + ++L C+ D + RP +++
Sbjct: 312 CSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELV 353
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFV 195
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT Y++PE + S D W C I +++ G+ P
Sbjct: 196 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 233
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 12/166 (7%)
Query: 9 GDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
GD + L+ G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 126 GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADF 185
Query: 68 XXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
GTP Y+APE + + D W I EM G
Sbjct: 186 GFAKRVKGRTWXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 128 PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
P +IY+ +V + PS ++++L + DL R
Sbjct: 237 PFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 19/166 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 119 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFV 177
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GT Y++PE + S D W C I +++ G+ P + I+ +++ +
Sbjct: 178 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 234
Query: 148 PPIPSGLPPA---VENVL-------LGCFEYD----LRSRPLMTDI 179
P P A VE +L LGC E + L++ P +
Sbjct: 235 FP-EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 279
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFV 195
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT Y++PE + S D W C I +++ G+ P
Sbjct: 196 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 233
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 26/199 (13%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G++ D + + ++S + A ++ + L K + +L N ++ E +
Sbjct: 94 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFA 116
D L R + Y A P +W PE S ++D W F
Sbjct: 154 DF--------------GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 199
Query: 117 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
+ E+ T G+ P G + ++Y+ + + + P G P V ++ C++++ RP
Sbjct: 200 VLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPS 258
Query: 176 MTDILRVFKSS-QNSVHSD 193
+I + F++ Q S SD
Sbjct: 259 FAEIHQAFETMFQESSISD 277
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 14/176 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 94 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 146
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLT 124
++ SS GT +Y+ PE + G + E D W E L
Sbjct: 147 ELKIADFGWSCHAPSSRRTTLSGTLDYLPPEM----IEGRMHDEKVDLWSLGVLCYEFLV 202
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
G P + E Y + R + P + +++ +++ RP++ ++L
Sbjct: 203 GKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFV 196
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT Y++PE + S D W C I +++ G+ P
Sbjct: 197 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 12/166 (7%)
Query: 9 GDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
GD + L+ G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 126 GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADF 185
Query: 68 XXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
GTP Y+APE + + D W I EM G
Sbjct: 186 GFAKRVKGRTWXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 128 PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
P +IY+ +V + PS ++++L + DL R
Sbjct: 237 PFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 79/180 (43%), Gaps = 25/180 (13%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + +GGK+ L + ++ +A+G+ + K + +L+ N +++E+ +
Sbjct: 91 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKI 150
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PEV--RGPISFETDSWGF 115
D L R + Y A P +W PE G + +++ W F
Sbjct: 151 ADF--------------GLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSF 196
Query: 116 ACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
+ E++T G P GR+ ++ A+ + +P + P + +++ C++ RP
Sbjct: 197 GILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRM-ENCPDELYDIMKMCWKEKAEERP 255
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 26/199 (13%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G++ D + + ++S + A ++ + L K + +L N ++ E +
Sbjct: 94 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFA 116
D L R + Y A P +W PE S ++D W F
Sbjct: 154 DF--------------GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 199
Query: 117 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
+ E+ T G+ P G + ++Y+ + + + P G P V ++ C++++ RP
Sbjct: 200 VLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPS 258
Query: 176 MTDILRVFKSS-QNSVHSD 193
+I + F++ Q S SD
Sbjct: 259 FAEIHQAFETMFQESSISD 277
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 142 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFV 200
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT Y++PE + S D W C I +++ G+ P
Sbjct: 201 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 238
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFV 193
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT Y++PE + S D W C I +++ G+ P
Sbjct: 194 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFV 193
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT Y++PE + S D W C I +++ G+ P
Sbjct: 194 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANSFV 196
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT Y++PE + S D W C I +++ G+ P
Sbjct: 197 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 234
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D +AQ + LS + + G+ LH+K I +LKP N +L + + +
Sbjct: 100 GELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ GTP ++APE E P+ E D W +L+G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 214
Query: 126 VQPRCGRSVDE 136
P G + E
Sbjct: 215 ASPFLGDTKQE 225
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 26/199 (13%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G++ D + + ++S + A ++ + L K + +L N ++ E +
Sbjct: 99 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 158
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFA 116
D L R + Y A P +W PE S ++D W F
Sbjct: 159 DF--------------GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 204
Query: 117 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
+ E+ T G+ P G + ++Y+ + + + P G P V ++ C++++ RP
Sbjct: 205 VLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPS 263
Query: 176 MTDILRVFKSS-QNSVHSD 193
+I + F++ Q S SD
Sbjct: 264 FAEIHQAFETMFQESSISD 282
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFV 193
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT Y++PE + S D W C I +++ G+ P
Sbjct: 194 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFV 195
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT Y++PE + S D W C I +++ G+ P
Sbjct: 196 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 233
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 141 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDY 200
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 201 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 256
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ P P + +L C+ + RP ++++
Sbjct: 257 XRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 298
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 112 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFV 170
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT Y++PE + S D W C I +++ G+ P
Sbjct: 171 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 208
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 26/199 (13%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G++ D + + ++S + A ++ + L K + +L N ++ E +
Sbjct: 94 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFA 116
D L R + Y A P +W PE S ++D W F
Sbjct: 154 DF--------------GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 199
Query: 117 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
+ E+ T G+ P G + ++Y+ + + + P G P V ++ C++++ RP
Sbjct: 200 VLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPS 258
Query: 176 MTDILRVFKSS-QNSVHSD 193
+I + F++ Q S SD
Sbjct: 259 FAEIHQAFETMFQESSISD 277
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 106 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 164
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 249
Query: 165 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 193
C++++ RP +I + F++ Q S SD
Sbjct: 250 CWQWNPSDRPSFAEIHQAFETMFQESSISD 279
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANAFV 193
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT Y++PE + S D W C I +++ G+ P
Sbjct: 194 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 231
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 12/122 (9%)
Query: 83 LPRRLGTPNYMAPE------QWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGR 132
L R + Y AP +W PE S ++D W F + E+ T G+ P G
Sbjct: 159 LSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 218
Query: 133 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS-QNSVH 191
+ ++Y+ + + + P G P V ++ C++++ RP +I + F++ Q S
Sbjct: 219 DLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 277
Query: 192 SD 193
SD
Sbjct: 278 SD 279
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 113 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFV 171
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT Y++PE + S D W C I +++ G+ P
Sbjct: 172 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 209
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 106 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 164
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 249
Query: 165 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 193
C++++ RP +I + F++ Q S SD
Sbjct: 250 CWQWNPSDRPSFAEIHQAFETMFQESSISD 279
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 114 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFV 172
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT Y++PE + S D W C I +++ G+ P
Sbjct: 173 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 210
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 12/122 (9%)
Query: 83 LPRRLGTPNYMAPE------QWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGR 132
L R + Y AP +W PE S ++D W F + E+ T G+ P G
Sbjct: 158 LSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 217
Query: 133 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS-QNSVH 191
+ ++Y+ + + + P G P V ++ C++++ RP +I + F++ Q S
Sbjct: 218 DLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 276
Query: 192 SD 193
SD
Sbjct: 277 SD 278
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 78/195 (40%), Gaps = 14/195 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G++ D + + ++S + A ++ + L K + +L N ++ E +
Sbjct: 92 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 151
Query: 66 DVXXXXXXXXXXXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
D + + P + P +A S ++D W F + E+
Sbjct: 152 DFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEI 203
Query: 123 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
T G+ P G ++Y+ + + + P G P V ++ C++++ RP +I +
Sbjct: 204 ATYGMSPYPGIDPSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
Query: 182 VFKSS-QNSVHSDGG 195
F++ Q S SD G
Sbjct: 263 AFETMFQESSISDEG 277
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 106 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 164
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 202 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 260
Query: 165 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 193
C++++ RP +I + F++ Q S SD
Sbjct: 261 CWQWNPSDRPSFAEIHQAFETMFQESSISD 290
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 106 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 164
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 248
Query: 165 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 193
C++++ RP +I + F++ Q S SD
Sbjct: 249 CWQWNPSDRPSFAEIHQAFETMFQESSISD 278
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 106 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 164
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 252
Query: 165 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 193
C++++ RP +I + F++ Q S SD
Sbjct: 253 CWQWNPSDRPSFAEIHQAFETMFQESSISD 282
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 59/161 (36%), Gaps = 12/161 (7%)
Query: 25 VFRYAIDLAQGILQLHSKG-----ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
V R L + + H + +L +LKP N L+ LGD
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF 172
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD 139
+ +GTP YM+PEQ R + ++D W C + E+ + P S E+
Sbjct: 173 AKTF---VGTPYYMSPEQMN---RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL-A 225
Query: 140 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
+R + IP + ++ RP + +IL
Sbjct: 226 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 6/147 (4%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPR-R 86
Y L G+ LHS+GI+ ++KP N +L L + D R
Sbjct: 114 YFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTG--GTLKISALGVAEALHPFAADDTCRTS 171
Query: 87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
G+P + PE + F+ D W ++ + TG+ P G ++ ++++ + +
Sbjct: 172 QGSPAFQPPEIAN-GLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSY 230
Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSR 173
IP P + ++L G EY+ R
Sbjct: 231 A--IPGDCGPPLSDLLKGMLEYEPAKR 255
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + LH KGI+ +LKP N +LNE + D + +
Sbjct: 115 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFV 173
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
GT Y++PE + S D W C I +++ G+ P
Sbjct: 174 GTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 211
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 13/174 (7%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + +G L L N+ A +A G+ + + +L+ N ++ +
Sbjct: 87 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKI 146
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIE 121
D ++ R G + APE + G + ++D W F + E
Sbjct: 147 ADFGLARLIE-----DNEXTARQGAKFPIKWTAPEA---ALYGRFTIKSDVWSFGILLTE 198
Query: 122 MLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
++T G P G + E+ + V R +P P P ++ +++ C++ D RP
Sbjct: 199 LVTKGRVPYPGMNNREVLEQVERGYRMP-CPQDCPISLHELMIHCWKKDPEERP 251
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Query: 35 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMA 94
G+ LH I+ +LKP N +L ++ L + + RLGT Y+A
Sbjct: 148 GVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK-MKERLGTAYYIA 206
Query: 95 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
PE +R + D W + +L G P G++ EI
Sbjct: 207 PEV----LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI 245
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 67/175 (38%), Gaps = 12/175 (6%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 93 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSA-----G 145
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ SS GT +Y+ PE + + + D W E L G
Sbjct: 146 ELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVG 202
Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + + Y + R + P + +++ +++ RP++ ++L
Sbjct: 203 KPPFEANTYQDTYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 23/166 (13%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEA 59
M+ +G D++ + K G++ + + +I + +G+ L K I+ ++KP N ++N
Sbjct: 83 MEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 141
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
L D S +GT +YM+PE+ Q S ++D W S+
Sbjct: 142 GEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQ---GTHYSVQSDIWSMGLSL 193
Query: 120 IEMLTGVQP----------RCGRSVDEIYDAVVRRQEIPP-IPSGL 154
+EM G P R ++ E+ D +V E PP +PSG+
Sbjct: 194 VEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIV--NEPPPKLPSGV 237
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 16/112 (14%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
+ +L + L ++ I+ ++KP N +L+E + D ++ LPR
Sbjct: 120 FICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNI----------AAMLPRET 169
Query: 88 ------GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS 133
GT YMAPE + SF D W + E+L G +P RS
Sbjct: 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRS 221
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 59/161 (36%), Gaps = 12/161 (7%)
Query: 25 VFRYAIDLAQGILQLHSKG-----ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
V R L + + H + +L +LKP N L+ LGD
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF 172
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD 139
+ +GTP YM+PEQ R + ++D W C + E+ + P S E+
Sbjct: 173 AKAF---VGTPYYMSPEQMN---RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL-A 225
Query: 140 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
+R + IP + ++ RP + +IL
Sbjct: 226 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 106 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 164
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 252
Query: 165 CFEYDLRSRPLMTDILRVFKS 185
C++++ RP +I + F++
Sbjct: 253 CWQWNPSDRPSFAEIHQAFET 273
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N I+++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEYLAPE---IIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 106 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 164
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 193 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 251
Query: 165 CFEYDLRSRPLMTDILRVFKS 185
C++++ RP +I + F++
Sbjct: 252 CWQWNPSDRPSFAEIHQAFET 272
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 106 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 164
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 247
Query: 165 CFEYDLRSRPLMTDILRVFKS 185
C++++ RP +I + F++
Sbjct: 248 CWQWNPSDRPSFAEIHQAFET 268
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 106 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 164
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 247
Query: 165 CFEYDLRSRPLMTDILRVFKS 185
C++++ RP +I + F++
Sbjct: 248 CWQWNPSDRPSFAEIHQAFET 268
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 74/186 (39%), Gaps = 6/186 (3%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
M+ +G + +G +L + + + D A G+ L SK + +L N ++ E +
Sbjct: 191 MELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN 250
Query: 61 RAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
+ D +S R++ + APE G S E+D W F +
Sbjct: 251 VLKISDFGMSREEADGVYAASGGLRQVPV-KWTAPEALN---YGRYSSESDVWSFGILLW 306
Query: 121 EMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
E + G P S + + V + +P P P AV ++ C+ Y+ RP + I
Sbjct: 307 ETFSLGASPYPNLSNQQTREFVEKGGRLP-CPELCPDAVFRLMEQCWAYEPGQRPSFSTI 365
Query: 180 LRVFKS 185
+ +S
Sbjct: 366 YQELQS 371
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 6/186 (3%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
M+ +G + +G +L + + + D A G+ L SK + +L N ++ E +
Sbjct: 191 MELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN 250
Query: 61 RAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
+ D +S R++ + APE G S E+D W F +
Sbjct: 251 VLKISDFGMSREEADGVXAASGGLRQVPV-KWTAPEALN---YGRYSSESDVWSFGILLW 306
Query: 121 EMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
E + G P S + + V + +P P P AV ++ C+ Y+ RP + I
Sbjct: 307 ETFSLGASPYPNLSNQQTREFVEKGGRLP-CPELCPDAVFRLMEQCWAYEPGQRPSFSTI 365
Query: 180 LRVFKS 185
+ +S
Sbjct: 366 YQELQS 371
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 106 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 164
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 252
Query: 165 CFEYDLRSRPLMTDILRVFKS 185
C++++ RP +I + F++
Sbjct: 253 CWQWNPSDRPSFAEIHQAFET 273
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 65/175 (37%), Gaps = 12/175 (6%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V + +L K Y +LA + HSK ++ ++KP N +L A G
Sbjct: 98 GTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA-----G 150
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ SS GT +Y+ PE + + D W E L G
Sbjct: 151 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDE---KVDLWSLGVLCYEFLVG 207
Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
P + E Y + R + P + +++ +++ RP + ++L
Sbjct: 208 KPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPXLREVL 260
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 106 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 164
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 252
Query: 165 CFEYDLRSRPLMTDILRVFKS 185
C++++ RP +I + F++
Sbjct: 253 CWQWNPSDRPSFAEIHQAFET 273
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 205 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ P P + +L C+ + RP ++++
Sbjct: 261 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 2 KFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEAD 60
KFY+ + KG + + + A+ + + + LHSK ++ ++KP N ++N
Sbjct: 138 KFYKQVID------KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG 191
Query: 61 RAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGP-ISFETDSWGFACSI 119
+ + D + D G YMAPE+ PE+ S ++D W ++
Sbjct: 192 QVKMCDFGISGYLVDSVAKTIDA----GCKPYMAPERINPELNQKGYSVKSDIWSLGITM 247
Query: 120 IEM 122
IE+
Sbjct: 248 IEL 250
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 196 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ P P + +L C+ + RP ++++
Sbjct: 252 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 196 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ P P + +L C+ + RP ++++
Sbjct: 252 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N +++E + D
Sbjct: 123 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT 182
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 183 WXLC------GTPEYLAPE---IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 233
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 234 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 267
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 248 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 303
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ P P + +L C+ + RP ++++
Sbjct: 304 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 345
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 250 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 305
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ P P + +L C+ + RP ++++
Sbjct: 306 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 347
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 257 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 312
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ P P + +L C+ + RP ++++
Sbjct: 313 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 354
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 196 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ P P + +L C+ + RP ++++
Sbjct: 252 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 196 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ P P + +L C+ + RP ++++
Sbjct: 252 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 255 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 310
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ P P + +L C+ + RP ++++
Sbjct: 311 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 352
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
+L + + A ++A G+ L++K + NL N ++ +GD
Sbjct: 129 TLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY-----E 183
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +MAPE + G + +D W F + E+ + QP G S +
Sbjct: 184 TDYYRKGGKGLLPVRWMAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 240
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P V +++ C++++ RP +I+ + K
Sbjct: 241 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 206
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 207 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 262
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ P P + +L C+ + RP ++++
Sbjct: 263 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 304
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
+L + + A ++A G+ L++K + NL N ++ +GD
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY-----E 182
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +MAPE + G + +D W F + E+ + QP G S +
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P V +++ C++++ RP +I+ + K
Sbjct: 240 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 60/156 (38%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
+ GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLA------GTPEYLAPE---IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 204
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 205 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ P P + +L C+ + RP ++++
Sbjct: 261 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 68/162 (41%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDX 204
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 205 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ P P + +L C+ + RP ++++
Sbjct: 261 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 196
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 197 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 248 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 7/119 (5%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+G++ + + +G KL + +G+ +HSK ++ +LKP N L + + +
Sbjct: 118 KGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKI 177
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEML 123
GD + R GT YM+PEQ + G E D + + E+L
Sbjct: 178 GDFGLVTSLKNDGKRT----RSKGTLRYMSPEQISSQDYGK---EVDLYALGLILAELL 229
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 241
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 242 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 297
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ P P + +L C+ + RP ++++
Sbjct: 298 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 339
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 77/193 (39%), Gaps = 14/193 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G++ D + + ++S + A ++ + L K + +L N ++ E +
Sbjct: 92 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 151
Query: 66 DVXXXXXXXXXXXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
D + + P + P +A S ++D W F + E+
Sbjct: 152 DFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEI 203
Query: 123 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
T G+ P G ++Y+ + + + P G P V ++ C++++ RP +I +
Sbjct: 204 ATYGMSPYPGIDPSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
Query: 182 VFKSS-QNSVHSD 193
F++ Q S SD
Sbjct: 263 AFETMFQESSISD 275
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 5/119 (4%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
K+S Y + +G+ +H + L+LKP N + L +
Sbjct: 250 NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE 136
S + GT + APE + + P+ + TD W +L+G+ P G + DE
Sbjct: 310 KQSVKV--TTGTAEFAAPEVAEGK---PVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 363
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 5/119 (4%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
K+S Y + +G+ +H + L+LKP N + L +
Sbjct: 144 NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 203
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE 136
S + GT + APE + + P+ + TD W +L+G+ P G + DE
Sbjct: 204 KQSVKV--TTGTAEFAAPEVAEGK---PVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 257
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 74/177 (41%), Gaps = 9/177 (5%)
Query: 2 KFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR 61
+F E D +L G+ ++ + +A G+ L + +L N ++N
Sbjct: 97 EFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSN-- 154
Query: 62 AVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFET--DSWGFACS 118
++ V SSD P + P +W PE F + D+W +
Sbjct: 155 -LVCKVSDFGLSRFLEENSSD-PTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIV 212
Query: 119 IIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
+ E+++ G +P S ++ +A+ + +PP P P ++ ++L C++ D +RP
Sbjct: 213 MWEVMSFGERPYWDMSNQDVINAIEQDYRLPP-PPDCPTSLHQLMLDCWQKDRNARP 268
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 11/130 (8%)
Query: 17 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 76
G +++ NV + L +G+ H + +L +LKP N ++NE L D
Sbjct: 94 GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADF--------G 145
Query: 77 XXXSSDLPRRLGTPNYMAPEQWQPEV-RGPISFET--DSWGFACSIIEMLTGVQPRCGRS 133
+ +P + + P++ G + T D WG C EM TG G +
Sbjct: 146 LARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST 205
Query: 134 VDEIYDAVVR 143
V+E + R
Sbjct: 206 VEEQLHFIFR 215
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/193 (18%), Positives = 76/193 (39%), Gaps = 14/193 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G++ D + + ++S + A ++ + L K + +L N ++ E +
Sbjct: 92 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 151
Query: 66 DVXXXXXXXXXXXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
D + + P + P +A S ++D W F + E+
Sbjct: 152 DFGLSRLMTGDTFTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEI 203
Query: 123 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
T G+ P G ++Y+ + + + P G P V ++ C++++ RP +I +
Sbjct: 204 ATYGMSPYPGIDPSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
Query: 182 VFKSS-QNSVHSD 193
F++ Q S SD
Sbjct: 263 AFETMFQESSISD 275
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 205 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ P P + +L C+ + RP ++++
Sbjct: 261 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 205 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ P P + +L C+ + RP ++++
Sbjct: 261 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 74/177 (41%), Gaps = 9/177 (5%)
Query: 2 KFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR 61
+F E D +L G+ ++ + +A G+ L + +L N ++N
Sbjct: 95 EFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSN-- 152
Query: 62 AVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFET--DSWGFACS 118
++ V SSD P + P +W PE F + D+W +
Sbjct: 153 -LVCKVSDFGLSRFLEENSSD-PTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIV 210
Query: 119 IIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
+ E+++ G +P S ++ +A+ + +PP P P ++ ++L C++ D +RP
Sbjct: 211 MWEVMSFGERPYWDMSNQDVINAIEQDYRLPP-PPDCPTSLHQLMLDCWQKDRNARP 266
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 157 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGAT 216
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 217 WTLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 268 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 141 LTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 200
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 138
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 201 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 256
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
++ P P + +L C+ + RP ++++
Sbjct: 257 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 298
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
+L + + A ++A G+ L++K + +L N ++ +GD
Sbjct: 125 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX-----E 179
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +MAPE + G + +D W F + E+ + QP G S +
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 236
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P V +++ C++++ + RP +I+ + K
Sbjct: 237 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 62/164 (37%), Gaps = 27/164 (16%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG--------- 186
Query: 78 XXSSDLPRRL--------GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPR 129
L +R+ GTP Y+APE + + D W I EM G P
Sbjct: 187 -----LAKRVKGRTWXLCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 130 CGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
+IY+ +V + PS ++++L + DL R
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 2 KFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEAD 60
KFY+ + KG + + + A+ + + + LHSK ++ ++KP N ++N
Sbjct: 94 KFYKQVID------KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG 147
Query: 61 RAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGP-ISFETDSWGFACSI 119
+ + D D G YMAPE+ PE+ S ++D W ++
Sbjct: 148 QVKMCDFGISGYLVDDVAKDIDA----GCKPYMAPERINPELNQKGYSVKSDIWSLGITM 203
Query: 120 IEM 122
IE+
Sbjct: 204 IEL 206
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 157 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 216
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 217 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 268 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 63/166 (37%), Gaps = 12/166 (7%)
Query: 9 GDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
G+ + L+ G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 112 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF 171
Query: 68 XXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
GTP Y+APE + + D W I EM G
Sbjct: 172 GFAKRVKGRTWTLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYP 222
Query: 128 PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
P +IY+ +V + PS ++++L + DL R
Sbjct: 223 PFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 266
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 62/164 (37%), Gaps = 27/164 (16%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFG--------- 186
Query: 78 XXSSDLPRRL--------GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPR 129
L +R+ GTP Y+APE + + D W I EM G P
Sbjct: 187 -----LAKRVKGRTWXLCGTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 130 CGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
+IY+ +V + PS ++++L + DL R
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D++ K K + ++ Y + LA + LH GI+ +LKP N +L+ + L
Sbjct: 105 GELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCL- 161
Query: 66 DVXXXXXXXXXXXXSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
+ + L R L GTP Y+APE + D W + L+
Sbjct: 162 -IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 220
Query: 125 GVQP 128
G P
Sbjct: 221 GYPP 224
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
+L + + A ++A G+ L++K + +L N ++ +GD
Sbjct: 127 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY-----E 181
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +MAPE + G + +D W F + E+ + QP G S +
Sbjct: 182 TDYYRKGGKGLLPVRWMAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 238
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P V +++ C++++ + RP +I+ + K
Sbjct: 239 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
+L + + A ++A G+ L++K + +L N ++ +GD
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX-----E 182
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +MAPE + G + +D W F + E+ + QP G S +
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P V +++ C++++ + RP +I+ + K
Sbjct: 240 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 197 WTLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 248 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 25/119 (21%)
Query: 16 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 75
+G +L+L F++ L QG+ H IL +LKP N ++N+ + LGD
Sbjct: 103 RGLELNLVKYFQW--QLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDF-------- 152
Query: 76 XXXXSSDLPRRLGTP-NYMAPEQWQPEVRGP--------ISFETDSWGFACSIIEMLTG 125
L R G P N + E R P S D W C + EM+TG
Sbjct: 153 ------GLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG 205
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 71/171 (41%), Gaps = 15/171 (8%)
Query: 14 QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
QL G +++ +Y D+ L ++ IL+ + N + +D LG V
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS----NLVCKVSDFG-LGRVLEDDPE 202
Query: 74 XXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR 132
+P R +P +A ++ + +D W + + E+++ G +P
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKF--------TSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 133 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 183
S ++ AV +PP P P A+ ++L C++ D +RP I+ +
Sbjct: 255 SNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D++ K K + ++ Y + LA + LH GI+ +LKP N +L+ + L
Sbjct: 224 GELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCL- 280
Query: 66 DVXXXXXXXXXXXXSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
+ + L R L GTP Y+APE + D W + L+
Sbjct: 281 -IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 339
Query: 125 GVQP 128
G P
Sbjct: 340 GYPP 343
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Query: 9 GDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVX 68
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 130 ADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 189
Query: 69 XXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 190 LARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 244
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 14/171 (8%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + + + ++ V R + Q + LHS ++ N+K N +L L
Sbjct: 103 GSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQVIHRNIKSDNILLGMDGSVKLT 159
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
D S + +GTP +MAPE + GP + D W IEM+ G
Sbjct: 160 DFGFCAQITPEQSKRSTM---VGTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEMIEG 213
Query: 126 VQPRCGRS-VDEIYDAVVRRQEIPPI--PSGLPPAVENVLLGCFEYDLRSR 173
P + + +Y ++ P + P L + L C E D+ R
Sbjct: 214 EPPYLNENPLRALY--LIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 262
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D++ K K + ++ Y + LA + LH GI+ +LKP N +L+ + L
Sbjct: 238 GELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCL- 294
Query: 66 DVXXXXXXXXXXXXSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
+ + L R L GTP Y+APE + D W + L+
Sbjct: 295 -IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 353
Query: 125 GVQP 128
G P
Sbjct: 354 GYPP 357
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D++ K K + ++ Y + LA + LH GI+ +LKP N +L+ + L
Sbjct: 98 GELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCL- 154
Query: 66 DVXXXXXXXXXXXXSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
+ + L R L GTP Y+APE + D W + L+
Sbjct: 155 -IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 213
Query: 125 GVQP 128
G P
Sbjct: 214 GYPP 217
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 7/119 (5%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+G++ + + +G KL + +G+ +HSK ++ +LKP N L + + +
Sbjct: 104 KGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKI 163
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEML 123
GD R GT YM+PEQ + G E D + + E+L
Sbjct: 164 GDFGLVTSLKNDGKRX----RSKGTLRYMSPEQISSQDYGK---EVDLYALGLILAELL 215
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D++ K K + ++ Y + LA + LH GI+ +LKP N +L+ + L
Sbjct: 99 GELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCL- 155
Query: 66 DVXXXXXXXXXXXXSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
+ + L R L GTP Y+APE + D W + L+
Sbjct: 156 -IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
Query: 125 GVQP 128
G P
Sbjct: 215 GYPP 218
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 197 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 248 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 197 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 248 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 197 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 248 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D++ K K + ++ Y + LA + LH GI+ +LKP N +L+ + L
Sbjct: 99 GELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCL- 155
Query: 66 DVXXXXXXXXXXXXSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
+ + L R L GTP Y+APE + D W + L+
Sbjct: 156 -IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
Query: 125 GVQP 128
G P
Sbjct: 215 GYPP 218
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 197 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 248 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
+L + + A ++A G+ L++K + +L N ++ +GD
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY-----E 182
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +MAPE + G + +D W F + E+ + QP G S +
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P V +++ C++++ + RP +I+ + K
Sbjct: 240 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLX------GTPEYLAPE---IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 197 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 248 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D++ K K + ++ Y + LA + LH GI+ +LKP N +L+ + L
Sbjct: 99 GELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCL- 155
Query: 66 DVXXXXXXXXXXXXSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
+ + L R L GTP Y+APE + D W + L+
Sbjct: 156 -IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
Query: 125 GVQP 128
G P
Sbjct: 215 GYPP 218
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 197 WXLC------GTPEYLAPE---IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 248 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 197 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 248 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 129 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 188
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 189 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 239
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 240 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 273
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 137 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 197 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 248 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEYLAPE---IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEYLAPE---IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEYLAPE---IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGL 172
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 173 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 226
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 61/165 (36%), Gaps = 10/165 (6%)
Query: 16 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 75
K G+L R + G+ H ++ +LKP N +L+ A + D
Sbjct: 109 KNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168
Query: 76 XXXXSSDLPRRLGTPNYMAPEQWQPEVR-GPISFETDSWGFACSIIEMLTGVQPRCGRSV 134
L G+PNY APE + GP E D W + +L G P V
Sbjct: 169 GEF----LRXSCGSPNYAAPEVISGRLYAGP---EVDIWSSGVILYALLCGTLPFDDDHV 221
Query: 135 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
++ + I P L P+V ++L + D R + DI
Sbjct: 222 PTLFKKIC--DGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDI 264
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEA 59
M+ +G D++ + K G++ + + +I + +G+ L K I+ ++KP N ++N
Sbjct: 110 MEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 168
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
L D S +GT +YM+PE+ Q S ++D W S+
Sbjct: 169 GEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQGT---HYSVQSDIWSMGLSL 220
Query: 120 IEMLTGVQP 128
+EM G P
Sbjct: 221 VEMAVGRYP 229
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 5/107 (4%)
Query: 35 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMA 94
G LH I+ +LKP N +L R L + + RLGT Y+A
Sbjct: 133 GTTYLHKHNIVHRDLKPENLLLESKSRDALIKI-VDFGLSAHFEVGGKMKERLGTAYYIA 191
Query: 95 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 141
PE +R + D W + +L G P G++ EI V
Sbjct: 192 PEV----LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 27 RYAIDLAQGILQLHSK---GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDL 83
R A+ A+G+ LH I+ ++K N +L+E AV+GD
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 202
Query: 84 PRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
R GT ++APE G S +TD +G+ ++E++TG
Sbjct: 203 VR--GTIGHIAPEYLST---GKSSEKTDVFGYGVMLLELITG 239
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV---LGDVXXXXXXXXXXXXSSDLP 84
Y + + + H I+ ++KP N +L + + LGD +
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGG-- 192
Query: 85 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 143
R+GTP++MAPE + R P D WG + +L+G P G + + +++ +++
Sbjct: 193 -RVGTPHFMAPEVVK---REPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIK 246
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 5/164 (3%)
Query: 17 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 76
G L L ++ ++ +AQG+ L SK + ++ N +L A +GD
Sbjct: 146 GRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 205
Query: 77 XXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
RL +MAPE V + ++D W + + E+ + G+ P G V+
Sbjct: 206 SNYIVKGNARLPV-KWMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGLNPYPGILVN 261
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
+ +V+ P+ P + +++ C+ + RP I
Sbjct: 262 SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 305
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 5/164 (3%)
Query: 17 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 76
G L L ++ ++ +AQG+ L SK + ++ N +L A +GD
Sbjct: 152 GRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 77 XXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
RL +MAPE V + ++D W + + E+ + G+ P G V+
Sbjct: 212 SNYIVKGNARLPV-KWMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGLNPYPGILVN 267
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
+ +V+ P+ P + +++ C+ + RP I
Sbjct: 268 SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 311
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEA 59
M+ +G D++ + K G++ + + +I + +G+ L K I+ ++KP N ++N
Sbjct: 83 MEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 141
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
L D S +GT +YM+PE+ Q S ++D W S+
Sbjct: 142 GEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQGT---HYSVQSDIWSMGLSL 193
Query: 120 IEMLTGVQP 128
+EM G P
Sbjct: 194 VEMAVGRYP 202
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGL 170
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 171 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 224
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGL 174
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 175 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 228
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGL 170
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 171 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 224
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEA 59
M+ +G D++ + K G++ + + +I + +G+ L K I+ ++KP N ++N
Sbjct: 145 MEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 203
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
L D S +GT +YM+PE+ Q S ++D W S+
Sbjct: 204 GEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQ---GTHYSVQSDIWSMGLSL 255
Query: 120 IEMLTGVQP 128
+EM G P
Sbjct: 256 VEMAVGRYP 264
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEA 59
M+ +G D++ + K G++ + + +I + +G+ L K I+ ++KP N ++N
Sbjct: 83 MEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 141
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
L D S +GT +YM+PE+ Q S ++D W S+
Sbjct: 142 GEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQGT---HYSVQSDIWSMGLSL 193
Query: 120 IEMLTGVQP 128
+EM G P
Sbjct: 194 VEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEA 59
M+ +G D++ + K G++ + + +I + +G+ L K I+ ++KP N ++N
Sbjct: 83 MEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 141
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
L D S +GT +YM+PE+ Q S ++D W S+
Sbjct: 142 GEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQGT---HYSVQSDIWSMGLSL 193
Query: 120 IEMLTGVQP 128
+EM G P
Sbjct: 194 VEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEA 59
M+ +G D++ + K G++ + + +I + +G+ L K I+ ++KP N ++N
Sbjct: 83 MEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 141
Query: 60 DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
L D S +GT +YM+PE+ Q S ++D W S+
Sbjct: 142 GEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQGT---HYSVQSDIWSMGLSL 193
Query: 120 IEMLTGVQP 128
+EM G P
Sbjct: 194 VEMAVGRYP 202
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 5/164 (3%)
Query: 17 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 76
G L L ++ ++ +AQG+ L SK + ++ N +L A +GD
Sbjct: 154 GRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 213
Query: 77 XXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
RL +MAPE V + ++D W + + E+ + G+ P G V+
Sbjct: 214 SNYIVKGNARLPV-KWMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGLNPYPGILVN 269
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
+ +V+ P+ P + +++ C+ + RP I
Sbjct: 270 SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 313
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGL 174
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 175 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 228
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGL 170
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 171 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 224
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 14/179 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G +G + + K L + + Y++ + + + L S + ++ N ++ + LG
Sbjct: 97 GELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLG 155
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFET--DSWGFACSIIEM 122
D + + R P +W PE F T D W FA + E+
Sbjct: 156 DFGLSRYIEDEDYYKASVTR--------LPIKWMSPESINFRRFTTASDVWMFAVCMWEI 207
Query: 123 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
L+ G QP ++ V+ + + P P PP + ++ C++YD RP T+++
Sbjct: 208 LSFGKQPFFWLENKDVI-GVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 265
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 14/179 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G +G + + K L + + Y++ + + + L S + ++ N ++ + LG
Sbjct: 109 GELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLG 167
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFET--DSWGFACSIIEM 122
D + + R P +W PE F T D W FA + E+
Sbjct: 168 DFGLSRYIEDEDYYKASVTR--------LPIKWMSPESINFRRFTTASDVWMFAVCMWEI 219
Query: 123 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
L+ G QP ++ V+ + + P P PP + ++ C++YD RP T+++
Sbjct: 220 LSFGKQPFFWLENKDVI-GVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 277
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 10/141 (7%)
Query: 40 HSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 99
H ++ +LKP N +L+ A + D L G+PNY APE
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD----GEFLRTSCGSPNYAAPEVIS 183
Query: 100 PEVR-GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 158
+ GP E D W + +L G P V ++ + R + IP L +V
Sbjct: 184 GRLYAGP---EVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI--RGGVFYIPEYLNRSV 238
Query: 159 ENVLLGCFEYDLRSRPLMTDI 179
+L+ + D R + DI
Sbjct: 239 ATLLMHMLQVDPLKRATIKDI 259
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
YA + LHS ++ +LKP N ++++ + D
Sbjct: 141 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------ 194
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + + D W I EM G P +IY+ +V +
Sbjct: 195 GTPEYLAPE---IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-- 249
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
PS ++++L + DL R
Sbjct: 250 VRFPSHFSSDLKDLLRNLLQVDLTKR 275
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 25/180 (13%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + G L L + A +A G+ + + +L+ N ++ E +
Sbjct: 96 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 155
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGF 115
D L R + Y A P +W PE + G + ++D W F
Sbjct: 156 ADF--------------GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 116 ACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
+ E+ T G P G E+ D V R +P P P ++ +++ C+ D RP
Sbjct: 202 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERP 260
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK +LS ++ + + +G+ +HS +L +LKP N ++N + D
Sbjct: 131 DLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGL 190
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 191 ARIADPEHDHTGFLTEXVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 244
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 14/179 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G +G + + K L + + Y++ + + + L S + ++ N ++ + LG
Sbjct: 93 GELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLG 151
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFET--DSWGFACSIIEM 122
D + + R P +W PE F T D W FA + E+
Sbjct: 152 DFGLSRYIEDEDYYKASVTR--------LPIKWMSPESINFRRFTTASDVWMFAVCMWEI 203
Query: 123 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
L+ G QP ++ V+ + + P P PP + ++ C++YD RP T+++
Sbjct: 204 LSFGKQPFFWLENKDVI-GVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 261
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
YA + LHS ++ +LKP N ++++ + D
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------ 199
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + + D W I EM G P +IY+ +V +
Sbjct: 200 GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-- 254
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
PS ++++L + DL R
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 25/180 (13%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + G L L + A +A G+ + + +L+ N ++ E +
Sbjct: 96 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 155
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGF 115
D L R + Y A P +W PE + G + ++D W F
Sbjct: 156 ADF--------------GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 116 ACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
+ E+ T G P G E+ D V R +P P P ++ +++ C+ D RP
Sbjct: 202 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERP 260
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
YA + LHS ++ +LKP N ++++ + D
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------ 199
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + + D W I EM G P +IY+ +V +
Sbjct: 200 GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-- 254
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
PS ++++L + DL R
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
+L + + A ++A G+ L++K + +L N ++ +GD
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX-----E 182
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +MAPE + G + +D W F + E+ + QP G S +
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLK---DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P V +++ C++++ RP +I+ + K
Sbjct: 240 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 12/143 (8%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI---LNEADRA 62
G + DR+ + G + + R + + LH GI+ +LKP N + L+E +
Sbjct: 101 GELFDRIVE--KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKI 158
Query: 63 VLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
++ D S L GTP Y+APE + P S D W +
Sbjct: 159 MISDF----GLSKMEDPGSVLSTACGTPGYVAPEVL---AQKPYSKAVDCWSIGVIAYIL 211
Query: 123 LTGVQPRCGRSVDEIYDAVVRRQ 145
L G P + ++++ +++ +
Sbjct: 212 LCGYPPFYDENDAKLFEQILKAE 234
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 25/180 (13%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + G L L + A +A G+ + + +L+ N ++ E +
Sbjct: 96 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 155
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGF 115
D L R + Y A P +W PE + G + ++D W F
Sbjct: 156 ADF--------------GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 116 ACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
+ E+ T G P G E+ D V R +P P P ++ +++ C+ D RP
Sbjct: 202 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERP 260
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
YA + LHS ++ +LKP N ++++ + D
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------ 200
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + + D W I EM G P +IY+ +V +
Sbjct: 201 GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-- 255
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
PS ++++L + DL R
Sbjct: 256 VRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 5/107 (4%)
Query: 35 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMA 94
G LH I+ +LKP N +L R L + + RLGT Y+A
Sbjct: 116 GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK-MKERLGTAYYIA 174
Query: 95 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 141
PE +R + D W + +L G P G++ EI V
Sbjct: 175 PEV----LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 217
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 25/180 (13%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + G L L + A +A G+ + + +L+ N ++ E +
Sbjct: 96 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 155
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGF 115
D L R + Y A P +W PE + G + ++D W F
Sbjct: 156 ADF--------------GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 116 ACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
+ E+ T G P G E+ D V R +P P P ++ +++ C+ D RP
Sbjct: 202 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERP 260
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
YA + LHS ++ +LKP N ++++ + D
Sbjct: 167 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------ 220
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + + D W I EM G P +IY+ +V +
Sbjct: 221 GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-- 275
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
PS ++++L + DL R
Sbjct: 276 VRFPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 12/143 (8%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI---LNEADRA 62
G + DR+ + G + + R + + LH GI+ +LKP N + L+E +
Sbjct: 101 GELFDRIVE--KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKI 158
Query: 63 VLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
++ D S L GTP Y+APE + P S D W +
Sbjct: 159 MISDF----GLSKMEDPGSVLSTACGTPGYVAPEVL---AQKPYSKAVDCWSIGVIAYIL 211
Query: 123 LTGVQPRCGRSVDEIYDAVVRRQ 145
L G P + ++++ +++ +
Sbjct: 212 LCGYPPFYDENDAKLFEQILKAE 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
YA + LHS ++ +LKP N ++++ + D
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------ 199
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + + D W I EM G P +IY+ +V +
Sbjct: 200 GTPEYLAPE---IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-- 254
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
PS ++++L + DL R
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Query: 40 HSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 99
H K I+ +LK N +L+ + D + L G+P Y APE +Q
Sbjct: 123 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF----GNKLDTFCGSPPYAAPELFQ 178
Query: 100 -PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 158
+ GP E D W + +++G P G+++ E+ + V+R + IP +
Sbjct: 179 GKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY--RIPFYMSTDC 233
Query: 159 ENVL 162
EN+L
Sbjct: 234 ENLL 237
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 74/189 (39%), Gaps = 26/189 (13%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + G L L + A +A G+ + + +L+ N ++ E +
Sbjct: 263 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 322
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGF 115
D L R + Y A P +W PE + G + ++D W F
Sbjct: 323 ADF--------------GLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 368
Query: 116 ACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
+ E+ T G P G E+ D V R +P P P ++ +++ C+ D RP
Sbjct: 369 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERP 427
Query: 175 LMTDILRVF 183
+ L+ F
Sbjct: 428 TF-EYLQAF 435
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 12/143 (8%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI---LNEADRA 62
G + DR+ + G + + R + + LH GI+ +LKP N + L+E +
Sbjct: 101 GELFDRIVE--KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKI 158
Query: 63 VLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
++ D S L GTP Y+APE + P S D W +
Sbjct: 159 MISDF----GLSKMEDPGSVLSTACGTPGYVAPEVL---AQKPYSKAVDCWSIGVIAYIL 211
Query: 123 LTGVQPRCGRSVDEIYDAVVRRQ 145
L G P + ++++ +++ +
Sbjct: 212 LCGYPPFYDENDAKLFEQILKAE 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
YA + LHS ++ +LKP N ++++ + D
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------ 199
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + + D W I EM G P +IY+ +V +
Sbjct: 200 GTPEYLAPE---IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-- 254
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
PS ++++L + DL R
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
YA + LHS ++ +LKP N ++++ + D
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------ 199
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + + D W I EM G P +IY+ +V +
Sbjct: 200 GTPEYLAPE---IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-- 254
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
PS ++++L + DL R
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Query: 40 HSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 99
H K I+ +LK N +L+ + D + L G+P Y APE +Q
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF----GNKLDEFCGSPPYAAPELFQ 185
Query: 100 -PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 158
+ GP E D W + +++G P G+++ E+ + V+R + IP +
Sbjct: 186 GKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY--RIPFYMSTDC 240
Query: 159 ENVL 162
EN+L
Sbjct: 241 ENLL 244
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 10/165 (6%)
Query: 16 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 75
K G++ R + + H ++ +LKP N +L+ A + D
Sbjct: 104 KHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163
Query: 76 XXXXSSDLPRRLGTPNYMAPEQWQPEVR-GPISFETDSWGFACSIIEMLTGVQPRCGRSV 134
L G+PNY APE + GP E D W + +L G P V
Sbjct: 164 ----GEFLRDSCGSPNYAAPEVISGRLYAGP---EVDIWSCGVILYALLCGTLPFDDEHV 216
Query: 135 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
++ + R + IP L +V +L+ + D R + DI
Sbjct: 217 PTLFKKI--RGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
YA + LHS ++ +LKP N ++++ + D
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------ 199
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + + D W I EM G P +IY+ +V +
Sbjct: 200 GTPEYLAPE---IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-- 254
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
PS ++++L + DL R
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 12/143 (8%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI---LNEADRA 62
G + DR+ + G + + R + + LH GI+ +LKP N + L+E +
Sbjct: 101 GELFDRIVE--KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKI 158
Query: 63 VLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
++ D S L GTP Y+APE + P S D W +
Sbjct: 159 MISDF----GLSKMEDPGSVLSTACGTPGYVAPEVL---AQKPYSKAVDCWSIGVIAYIL 211
Query: 123 LTGVQPRCGRSVDEIYDAVVRRQ 145
L G P + ++++ +++ +
Sbjct: 212 LCGYPPFYDENDAKLFEQILKAE 234
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 11/150 (7%)
Query: 34 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 93
QG+ LHS ++ ++K N +L+E LGD +GTP +M
Sbjct: 165 QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-------VGTPYWM 217
Query: 94 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPIPS 152
APE G + D W + IE+ P ++ +Y + + E P + S
Sbjct: 218 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH--IAQNESPALQS 275
Query: 153 G-LPPAVENVLLGCFEYDLRSRPLMTDILR 181
G N + C + + RP +L+
Sbjct: 276 GHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
YA + LHS ++ +LKP N ++++ + D
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------ 199
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + + D W I EM G P +IY+ +V +
Sbjct: 200 GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-- 254
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
PS ++++L + DL R
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
YA + LHS ++ +LKP N ++++ + D
Sbjct: 139 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------ 192
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + + D W I EM G P +IY+ +V +
Sbjct: 193 GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-- 247
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
PS ++++L + DL R
Sbjct: 248 VRFPSHFSSDLKDLLRNLLQVDLTKR 273
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 25/180 (13%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + G L L + A +A G+ + + +L+ N ++ E +
Sbjct: 85 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 144
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGF 115
D L R + Y A P +W PE + G + ++D W F
Sbjct: 145 ADF--------------GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 190
Query: 116 ACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
+ E+ T G P G E+ D V R +P P P ++ +++ C+ D RP
Sbjct: 191 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERP 249
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 68/174 (39%), Gaps = 13/174 (7%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADR 61
+GS+ D + G L L + A +A G+ + + +L+ N ++ E
Sbjct: 96 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 155
Query: 62 AVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE 121
A G + P + + APE + G + ++D W F + E
Sbjct: 156 ADFGLARLIEDNEXTARQGAKFPIK-----WTAPEA---ALYGRFTIKSDVWSFGILLTE 207
Query: 122 MLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
+ T G P G E+ D V R +P P P ++ +++ C+ D RP
Sbjct: 208 LTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERP 260
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 71/169 (42%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
+L + + A ++A G+ L++K + +L N ++ +GD
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYR 187
Query: 81 SD----LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
LP R +MAPE + G + +D W F + E+ + QP G S +
Sbjct: 188 KGGKGLLPVR-----WMAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P V +++ C++++ + RP +I+ + K
Sbjct: 240 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 25/180 (13%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + G L L + A +A G+ + + +L+ N ++ E +
Sbjct: 87 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 146
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGF 115
D L R + Y A P +W PE + G + ++D W F
Sbjct: 147 ADF--------------GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 192
Query: 116 ACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
+ E+ T G P G E+ D V R +P P P ++ +++ C+ D RP
Sbjct: 193 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERP 251
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
YA + LHS ++ +LKP N ++++ + D
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------ 200
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
GTP Y+APE + + D W I EM G P +IY+ +V +
Sbjct: 201 GTPEYLAPEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-- 255
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
PS ++++L + DL R
Sbjct: 256 VRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 131 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 190
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 191 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 244
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 11/150 (7%)
Query: 34 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 93
QG+ LHS ++ ++K N +L+E LGD +GTP +M
Sbjct: 126 QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-------VGTPYWM 178
Query: 94 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPIPS 152
APE G + D W + IE+ P ++ +Y + + E P + S
Sbjct: 179 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH--IAQNESPALQS 236
Query: 153 G-LPPAVENVLLGCFEYDLRSRPLMTDILR 181
G N + C + + RP +L+
Sbjct: 237 GHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 172
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 173 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 226
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 175 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 228
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 109 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 168
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 169 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 222
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 119 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 178
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 179 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 232
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 170
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 171 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 224
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 170
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 171 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 224
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 172
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 173 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 116 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 175
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 176 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 229
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 117 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 176
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 177 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 230
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 108 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 167
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 168 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 221
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 175 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 228
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 8/116 (6%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y +LA + HSK ++ ++KP N +L G++ SS
Sbjct: 117 YITELANALSYCHSKRVIHRDIKPENLLLGSN-----GELKIADFGWSVHAPSSRRTTLC 171
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 143
GT +Y+ PE + + + D W E L G+ P + E Y + R
Sbjct: 172 GTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR 224
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 115 DLYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 175 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 228
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 109 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 168
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 169 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 222
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 175 ARVADPDHDHTGFLXEXVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 228
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Query: 40 HSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 99
H K I+ +LK N +L+ + D + L G+P Y APE +Q
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF----GNKLDTFCGSPPYAAPELFQ 185
Query: 100 -PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 158
+ GP E D W + +++G P G+++ E+ + V+R + IP +
Sbjct: 186 GKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY--RIPFYMSTDC 240
Query: 159 ENVL 162
EN+L
Sbjct: 241 ENLL 244
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Query: 40 HSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 99
H K I+ +LK N +L+ + D + L G+P Y APE +Q
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF----GNKLDTFCGSPPYAAPELFQ 185
Query: 100 -PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 158
+ GP E D W + +++G P G+++ E+ + V+R + IP +
Sbjct: 186 GKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY--RIPFYMSTDC 240
Query: 159 ENVL 162
EN+L
Sbjct: 241 ENLL 244
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 10 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 69
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 116 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 175
Query: 70 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ L + T Y APE +G + D W C + EML+
Sbjct: 176 ARVADPDHDHTGFLXEXVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 229
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 35.0 bits (79), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Query: 40 HSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 99
H K I+ +LK N +L+ + D + L G+P Y APE +Q
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF----GNKLDTFCGSPPYAAPELFQ 185
Query: 100 -PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 158
+ GP E D W + +++G P G+++ E+ + V+R + IP +
Sbjct: 186 GKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY--RIPFYMSTDC 240
Query: 159 ENVL 162
EN+L
Sbjct: 241 ENLL 244
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ GTP ++APE E P+ E D W +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 213
Query: 126 VQPRCGRSVDE 136
P G + E
Sbjct: 214 ASPFLGDTKQE 224
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 98 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 155
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ GTP ++APE E P+ E D W +L+G
Sbjct: 156 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 212
Query: 126 VQPRCGRSVDE 136
P G + E
Sbjct: 213 ASPFLGDTKQE 223
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ GTP ++APE E P+ E D W +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 213
Query: 126 VQPRCGRSVDE 136
P G + E
Sbjct: 214 ASPFLGDTKQE 224
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 66/166 (39%), Gaps = 5/166 (3%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+ LS ++ ++ +AQG+ L SK + ++ N +L A +GD
Sbjct: 156 IANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 215
Query: 75 XXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRS 133
RL +MAPE V + ++D W + + E+ + G+ P G
Sbjct: 216 NDSNYIVKGNARLPV-KWMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGLNPYPGIL 271
Query: 134 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
V+ + +V+ P+ P + +++ C+ + RP I
Sbjct: 272 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 8/116 (6%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y +LA + HSK ++ ++KP N +L G++ SS
Sbjct: 117 YITELANALSYCHSKRVIHRDIKPENLLLGSN-----GELKIADFGWSVHAPSSRRDTLC 171
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 143
GT +Y+ PE + + + D W E L G+ P + E Y + R
Sbjct: 172 GTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR 224
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 72/171 (42%), Gaps = 11/171 (6%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + L + ++++D+ + + L + +L N +++E + A +
Sbjct: 271 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV 330
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
D + LP + P + +++ S ++D W F + E+ +
Sbjct: 331 SDFGLTKEASSTQD-TGKLPVKWTAPEALREKKF--------STKSDVWSFGILLWEIYS 381
Query: 125 -GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
G P + ++ V + ++ P G PPAV +V+ C+ D +RP
Sbjct: 382 FGRVPYPRIPLKDVVPRVEKGYKMDA-PDGCPPAVYDVMKNCWHLDAATRP 431
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 9/156 (5%)
Query: 25 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 84
VFR + + +HS+G +LKP N + +E + L D L
Sbjct: 113 VFR---QIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDF--GLCAKPKGNKDYHLQ 167
Query: 85 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 144
G+ Y APE Q + + E D W + ++ G P +V +Y ++R
Sbjct: 168 TCCGSLAYAAPELIQG--KSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG 225
Query: 145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ +P L P+ +L + D + R M ++L
Sbjct: 226 KY--DVPKWLSPSSILLLQQMLQVDPKKRISMKNLL 259
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I +M G P +I
Sbjct: 196 WXLC------GTPEYLAPE---IILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 98 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 155
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ GTP ++APE E P+ E D W +L+G
Sbjct: 156 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 212
Query: 126 VQPRCGRSVDE 136
P G + E
Sbjct: 213 ASPFLGDTKQE 223
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ GTP ++APE E P+ E D W +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 213
Query: 126 VQPRCGRSVDE 136
P G + E
Sbjct: 214 ASPFLGDTKQE 224
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 14/179 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + + + ++ V R + Q + LHS ++ ++K N +L L
Sbjct: 102 GSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 158
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
D S + +GTP +MAPE + GP + D W IEM+ G
Sbjct: 159 DFGFCAQITPEQSKRSXM---VGTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEMIEG 212
Query: 126 VQPRCGRS-VDEIYDAVVRRQEIPPI--PSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
P + + +Y ++ P + P L + L C E D+ R ++L+
Sbjct: 213 EPPYLNENPLRALY--LIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ GTP ++APE E P+ E D W +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 213
Query: 126 VQPRCGRSVDE 136
P G + E
Sbjct: 214 ASPFLGDTKQE 224
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ GTP ++APE E P+ E D W +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 213
Query: 126 VQPRCGRSVDE 136
P G + E
Sbjct: 214 ASPFLGDTKQE 224
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y DL +GI LH + I+ ++KP N ++ E + D + L +
Sbjct: 142 YFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADF---GVSNEFKGSDALLSNTV 198
Query: 88 GTPNYMAPEQWQPEVRGPISFET-DSWGFACSIIEMLTGVQP 128
GTP +MAPE E R S + D W ++ + G P
Sbjct: 199 GTPAFMAPESLS-ETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ GTP ++APE E P+ E D W +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 213
Query: 126 VQPRCGRSVDE 136
P G + E
Sbjct: 214 ASPFLGDTKQE 224
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 5/162 (3%)
Query: 19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 78
+LS ++ ++ +AQG+ L SK + ++ N +L A +GD
Sbjct: 162 QLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 221
Query: 79 XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 137
RL +MAPE V + ++D W + + E+ + G+ P G V+
Sbjct: 222 YIVKGNARLPV-KWMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK 277
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
+ +V+ P+ P + +++ C+ + RP I
Sbjct: 278 FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 319
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 40 HSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 99
H K I+ +LK N +L+ + D L G+P Y APE +Q
Sbjct: 128 HQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV----GGKLDTFCGSPPYAAPELFQ 183
Query: 100 -PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 158
+ GP E D W + +++G P G+++ E+ + V+R + IP +
Sbjct: 184 GKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK--YRIPFYMSTDC 238
Query: 159 ENVL 162
EN+L
Sbjct: 239 ENLL 242
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ GTP ++APE E P+ E D W +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 213
Query: 126 VQPRCGRSVDE 136
P G + E
Sbjct: 214 ASPFLGDTKQE 224
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 63/158 (39%), Gaps = 15/158 (9%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRR 86
+A G+ L G + +L N ++N + D V +P R
Sbjct: 156 IASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 145
+P +A ++ + +D W + + E+++ G +P S ++ AV
Sbjct: 216 WTSPEAIAYRKF--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 183
+PP P P A+ ++L C++ D +RP I+ +
Sbjct: 268 RLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 72/179 (40%), Gaps = 14/179 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + + + ++ V R + Q + LHS ++ ++K N +L L
Sbjct: 102 GSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 158
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
D S++ +GTP +MAPE + GP + D W IEM+ G
Sbjct: 159 DFGFCAQITPEQSKRSEM---VGTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEMIEG 212
Query: 126 VQPRCGRS-VDEIYDAVVRRQEIPPI--PSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
P + + +Y ++ P + P L + L C + D+ R ++L+
Sbjct: 213 EPPYLNENPLRALY--LIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 15/151 (9%)
Query: 39 LHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAP 95
LH I+ +LK N + + GD+ + + RR +GTP +MAP
Sbjct: 124 LHDNKIIHRDLKAGNILF-----TLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAP 178
Query: 96 EQWQPEVRG--PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI--- 150
E E P ++ D W ++IEM P + + + + + PP
Sbjct: 179 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE--PPTLAQ 236
Query: 151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
PS ++ L C E ++ +R + +L+
Sbjct: 237 PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 267
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 13/135 (9%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD----R 61
G + D +A+ + L+ + + G+ LHS I +LKP N +L + + R
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 62 AVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE 121
+ D ++ GTP ++APE E P+ E D W
Sbjct: 157 IKIIDFGLAHKIDF----GNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYI 209
Query: 122 MLTGVQPRCGRSVDE 136
+L+G P G + E
Sbjct: 210 LLSGASPFLGDTKQE 224
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ GTP ++APE E P+ E D W +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 213
Query: 126 VQPRCGRSVDE 136
P G + E
Sbjct: 214 ASPFLGDTKQE 224
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 70/171 (40%), Gaps = 15/171 (8%)
Query: 14 QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
QL G +++ +Y D+ L ++ IL+ + N + +D L V
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS----NLVCKVSDFG-LARVLEDDPE 202
Query: 74 XXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR 132
+P R +P +A ++ + +D W + + E+++ G +P
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKF--------TSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 133 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 183
S ++ AV +PP P P A+ ++L C++ D +RP I+ +
Sbjct: 255 SNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 69/180 (38%), Gaps = 25/180 (13%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + G L L + A +A G+ + + +L N ++ E +
Sbjct: 96 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKV 155
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGF 115
D L R + Y A P +W PE + G + ++D W F
Sbjct: 156 ADF--------------GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 116 ACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
+ E+ T G P G E+ D V R +P P P ++ +++ C+ D RP
Sbjct: 202 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERP 260
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 11/109 (10%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEAD----RAVLGDVXXXXXXXXXXXXSSDLPRRL 87
+ G+ LHS I +LKP N +L + + R + D ++
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIF 178
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE 136
GTP ++APE E P+ E D W +L+G P G + E
Sbjct: 179 GTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 63/158 (39%), Gaps = 15/158 (9%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRR 86
+A G+ L G + +L N ++N + D V +P R
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 145
+P +A ++ + +D W + + E+++ G +P S ++ AV
Sbjct: 216 WTSPEAIAYRKF--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 183
+PP P P A+ ++L C++ D +RP I+ +
Sbjct: 268 RLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 63/158 (39%), Gaps = 15/158 (9%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRR 86
+A G+ L G + +L N ++N + D V +P R
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 145
+P +A ++ + +D W + + E+++ G +P S ++ AV
Sbjct: 216 WTSPEAIAYRKF--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 183
+PP P P A+ ++L C++ D +RP I+ +
Sbjct: 268 RLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 63/158 (39%), Gaps = 15/158 (9%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRR 86
+A G+ L G + +L N ++N + D V +P R
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 145
+P +A ++ + +D W + + E+++ G +P S ++ AV
Sbjct: 216 WTSPEAIAYRKF--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 183
+PP P P A+ ++L C++ D +RP I+ +
Sbjct: 268 RLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 63/158 (39%), Gaps = 15/158 (9%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRR 86
+A G+ L G + +L N ++N + D V +P R
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 145
+P +A ++ + +D W + + E+++ G +P S ++ AV
Sbjct: 216 WTSPEAIAYRKF--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 183
+PP P P A+ ++L C++ D +RP I+ +
Sbjct: 268 RLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 63/158 (39%), Gaps = 15/158 (9%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRR 86
+A G+ L G + +L N ++N + D V +P R
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 145
+P +A ++ + +D W + + E+++ G +P S ++ AV
Sbjct: 216 WTSPEAIAYRKF--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 183
+PP P P A+ ++L C++ D +RP I+ +
Sbjct: 268 RLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 67/171 (39%), Gaps = 14/171 (8%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + + + ++ V R + Q + LHS ++ ++K N +L L
Sbjct: 103 GSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 159
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
D S + +GTP +MAPE + GP + D W IEM+ G
Sbjct: 160 DFGFCAQITPEQSKRSXM---VGTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEMIEG 213
Query: 126 VQPRCGRS-VDEIYDAVVRRQEIPPI--PSGLPPAVENVLLGCFEYDLRSR 173
P + + +Y ++ P + P L + L C E D+ R
Sbjct: 214 EPPYLNENPLRALY--LIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 262
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
SLS + + A ++A G+ L++ + +L N ++ E +GD
Sbjct: 130 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX-----E 184
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +M+PE + G + +D W F + E+ T QP G S +
Sbjct: 185 TDXXRKGGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 241
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 242 QVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 110 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 168
+D W + + E+++ G +P S ++ AV +PP P P A+ ++L C++
Sbjct: 229 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQK 287
Query: 169 DLRSRPLMTDILRVF 183
D +RP I+ +
Sbjct: 288 DRNNRPKFEQIVSIL 302
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 17/161 (10%)
Query: 30 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD---VXXXXXXXXXXXXSSDLPR- 85
I +A+ + LHSKG++ +LKP N D +GD V + +P
Sbjct: 171 IQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 230
Query: 86 -----RLGTPNYMAPEQWQPEVRG-PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD 139
++GT YM+PEQ + G S + D + + E+L + R V I D
Sbjct: 231 ATHXGQVGTKLYMSPEQ----IHGNNYSHKVDIFSLGLILFELLYSFSTQMER-VRIITD 285
Query: 140 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
VR + P + + P ++ RP TDI+
Sbjct: 286 --VRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDII 324
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
SLS + + A ++A G+ L++ + +L N ++ E +GD
Sbjct: 121 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX-----E 175
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +M+PE + G + +D W F + E+ T QP G S +
Sbjct: 176 TDXXRKGGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 232
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 233 QVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 280
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 40 HSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 99
H K I+ +LK N +L+ + D + L G P Y APE +Q
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF----GNKLDAFCGAPPYAAPELFQ 185
Query: 100 -PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 158
+ GP E D W + +++G P G+++ E+ + V+R + IP +
Sbjct: 186 GKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY--RIPFYMSTDC 240
Query: 159 ENVL 162
EN+L
Sbjct: 241 ENLL 244
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 63/158 (39%), Gaps = 5/158 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
++ +A+G+ L SK + +L N +L + D RL
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARL 232
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE 146
+MAPE V +FE+D W + + E+ + G P G VD + +++
Sbjct: 233 PV-KWMAPESIFNCV---YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 288
Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
P P + +++ C++ D RP I+++ +
Sbjct: 289 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 110 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 168
+D W + + E+++ G +P S ++ AV +PP P P A+ ++L C++
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQK 289
Query: 169 DLRSRPLMTDILRVF 183
D +RP I+ +
Sbjct: 290 DRNNRPKFEQIVSIL 304
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 110 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 168
+D W + + E+++ G +P S ++ AV +PP P P A+ ++L C++
Sbjct: 202 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQK 260
Query: 169 DLRSRPLMTDILRVF 183
D +RP I+ +
Sbjct: 261 DRNNRPKFEQIVSIL 275
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 95 PEQW-QPEVRGPISFET--DSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 150
P +W PE F + D W + + E+++ G +P S ++ AV +PP
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP- 242
Query: 151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 183
P P A+ ++L C++ D +RP I+ +
Sbjct: 243 PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 58/153 (37%), Gaps = 11/153 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+APE + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEYLAPE---IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL 170
Y+ +V + PS ++++L + DL
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 7/139 (5%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
+F + ++ D + G L V +Y + GI HS I+ ++KP N +++++
Sbjct: 103 FEFVDHTILDDLELFPNG-LDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSG 161
Query: 61 RAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
L D D + T Y APE +V+ + D W C +
Sbjct: 162 VVKLCDFGFARTLAAPGEVYDD---EVATRWYRAPELLVGDVKYGKA--VDVWAIGCLVT 216
Query: 121 EMLTGVQPRCGRS-VDEIY 138
EM G G S +D++Y
Sbjct: 217 EMFMGEPLFPGDSDIDQLY 235
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 11/109 (10%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEAD----RAVLGDVXXXXXXXXXXXXSSDLPRRL 87
+ G+ LHS I +LKP N +L + + R + D ++
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIF 178
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE 136
GTP ++APE E P+ E D W +L+G P G + E
Sbjct: 179 GTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
SLS + + A ++A G+ L++ + +L N ++ E +GD
Sbjct: 123 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----E 177
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +M+PE + G + +D W F + E+ T QP G S +
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 234
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 235 QVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 24/140 (17%)
Query: 3 FY-EGSVGDRMAQLKGGKLSLSNVFRYA------------IDLAQGILQLHSK-GILVLN 48
FY +G + M + GG SL V + A I + +G+ L K I+ +
Sbjct: 83 FYSDGEISICMEHMDGG--SLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRD 140
Query: 49 LKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISF 108
+KP N ++N L D S +GT +YMAPE+ Q S
Sbjct: 141 VKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF-----VGTRSYMAPERLQGT---HYSV 192
Query: 109 ETDSWGFACSIIEMLTGVQP 128
++D W S++E+ G P
Sbjct: 193 QSDIWSMGLSLVELAVGRYP 212
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 68/167 (40%), Gaps = 7/167 (4%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
++ +A+G+ L SK + +L N +L + D RL
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 232
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE 146
+MAPE V +FE+D W + + E+ + G P G VD + +++
Sbjct: 233 PV-KWMAPESIFNCV---YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 288
Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS--SQNSVH 191
P P + +++ C++ D RP I+++ + S+++ H
Sbjct: 289 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNH 335
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 63/158 (39%), Gaps = 15/158 (9%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRR 86
+A G+ L G + +L N ++N + D V +P R
Sbjct: 144 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 203
Query: 87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 145
+P +A ++ + +D W + + E+++ G +P S ++ AV
Sbjct: 204 WTSPEAIAYRKF--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 255
Query: 146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 183
+PP P P A+ ++L C++ D +RP I+ +
Sbjct: 256 RLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
SLS + + A ++A G+ L++ + +L N ++ E +GD
Sbjct: 130 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----E 184
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +M+PE + G + +D W F + E+ T QP G S +
Sbjct: 185 TDYYRKGGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 241
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 242 QVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 7/114 (6%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV-LGDVXXXXXX 73
L+ G L + + L +G+ +HS +L +LKP N +N D + +GD
Sbjct: 112 LEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
Query: 74 XXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE--TDSWGFACSIIEMLTG 125
L L T Y +P + P ++ D W C EMLTG
Sbjct: 172 DPHYSHKGHLSEGLVTKWYRSPRL----LLSPNNYTKAIDMWAAGCIFAEMLTG 221
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 14/146 (9%)
Query: 2 KFYEGSVGDRMAQL----KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 57
+FYEG G+ Q+ K + +N+ + + GI LH I+ ++KP N +L
Sbjct: 126 EFYEG--GELFEQIINRHKFDECDAANIMK---QILSGICYLHKHNIVHRDIKPENILL- 179
Query: 58 EADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFAC 117
E ++L L RLGT Y+APE ++ + + D W
Sbjct: 180 ENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV----LKKKYNEKCDVWSCGV 235
Query: 118 SIIEMLTGVQPRCGRSVDEIYDAVVR 143
+ +L G P G++ +I V +
Sbjct: 236 IMYILLCGYPPFGGQNDQDIIKKVEK 261
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 69/180 (38%), Gaps = 25/180 (13%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+G + D + G L L + A +A G+ + + +L+ N ++ E +
Sbjct: 96 KGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 155
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGF 115
D L R + Y A P +W PE + G + ++D W F
Sbjct: 156 ADF--------------GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 116 ACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
+ E+ T G P G E+ D V R +P P P ++ +++ C+ D RP
Sbjct: 202 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERP 260
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
SLS + + A ++A G+ L++ + +L N ++ E +GD
Sbjct: 126 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----E 180
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +M+PE + G + +D W F + E+ T QP G S +
Sbjct: 181 TDYYRKGGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 237
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 238 QVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 285
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 63/158 (39%), Gaps = 5/158 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
++ +A+G+ L SK + +L N +L + D RL
Sbjct: 166 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 225
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE 146
+MAPE V +FE+D W + + E+ + G P G VD + +++
Sbjct: 226 PV-KWMAPESIFNCV---YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 281
Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
P P + +++ C++ D RP I+++ +
Sbjct: 282 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 69/180 (38%), Gaps = 25/180 (13%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+G + D + G L L + A +A G+ + + +L+ N ++ E +
Sbjct: 96 KGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 155
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGF 115
D L R + Y A P +W PE + G + ++D W F
Sbjct: 156 ADF--------------GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 116 ACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
+ E+ T G P G E+ D V R +P P P ++ +++ C+ D RP
Sbjct: 202 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERP 260
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
SLS + + A ++A G+ L++ + +L N ++ E +GD
Sbjct: 127 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----E 181
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +M+PE + G + +D W F + E+ T QP G S +
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 238
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 239 QVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 286
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 9/107 (8%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
SL V ++A + Q + LH I+ +LKP N +L + R+ + +
Sbjct: 197 FSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV 256
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRG-PISFETDSWGFACSIIEMLTG 125
+ + R Y APE G PI D W C + E+LTG
Sbjct: 257 YTXIQSRF----YRAPEVILGARYGMPI----DMWSLGCILAELLTG 295
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 63/158 (39%), Gaps = 5/158 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
++ +A+G+ L SK + +L N +L + D RL
Sbjct: 168 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 227
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE 146
+MAPE V +FE+D W + + E+ + G P G VD + +++
Sbjct: 228 PV-KWMAPESIFNCV---YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 283
Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
P P + +++ C++ D RP I+++ +
Sbjct: 284 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 88 GTPNYMAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
G P Y APE +Q + GP E D W + +++G P G+++ E+ + V+R +
Sbjct: 175 GAPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK- 230
Query: 147 IPPIPSGLPPAVENVL 162
IP + EN+L
Sbjct: 231 -YRIPFYMSTDCENLL 245
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
SLS + + A ++A G+ L++ + +L N ++ E +GD
Sbjct: 158 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----E 212
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +M+PE + G + +D W F + E+ T QP G S +
Sbjct: 213 TDYYRKGGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 269
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 270 QVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 317
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 63/158 (39%), Gaps = 5/158 (3%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
++ +A+G+ L SK + +L N +L + D RL
Sbjct: 150 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 209
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE 146
+MAPE V +FE+D W + + E+ + G P G VD + +++
Sbjct: 210 PV-KWMAPESIFNCV---YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 265
Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
P P + +++ C++ D RP I+++ +
Sbjct: 266 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
SLS + + A ++A G+ L++ + +L N ++ E +GD
Sbjct: 129 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----E 183
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +M+PE + G + +D W F + E+ T QP G S +
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 240
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 241 QVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 110 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 168
+D W + + E+++ G +P + ++ +A+ + +PP P P A+ ++L C++
Sbjct: 195 SDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP-PMDCPSALHQLMLDCWQK 253
Query: 169 DLRSRPLMTDILRVF 183
D RP I+
Sbjct: 254 DRNHRPKFGQIVNTL 268
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 95 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 150
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 171 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 229
Query: 151 PSGLPPAVENVLLGCFEYDLRSRP 174
P+G P + +++ C+ YD+ +RP
Sbjct: 230 PAGCPREMYDLMNLCWTYDVENRP 253
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 15/130 (11%)
Query: 30 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD---VXXXXXXXXXXXXSSDLPR- 85
+ +A+ + LHSKG++ +LKP N D +GD V + +P
Sbjct: 125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 86 -----RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDA 140
++GT YM+PEQ S + D + + E+L + R V + D
Sbjct: 185 ARHTGQVGTKLYMSPEQIHG---NSYSHKVDIFSLGLILFELLYPFSTQMER-VRTLTD- 239
Query: 141 VVRRQEIPPI 150
VR + PP+
Sbjct: 240 -VRNLKFPPL 248
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP Y+AP + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEYLAP---AIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 110 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 168
+D W + + E+++ G +P + ++ +A+ + +PP P P A+ ++L C++
Sbjct: 221 SDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP-PMDCPSALHQLMLDCWQK 279
Query: 169 DLRSRPLMTDILRVF 183
D RP I+
Sbjct: 280 DRNHRPKFGQIVNTL 294
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 27 RYAIDLAQGILQLHSK---GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDL 83
R A+ A+G+ LH I+ ++K N +L+E AV+GD
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 194
Query: 84 PRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
R G ++APE G S +TD +G+ ++E++TG
Sbjct: 195 VR--GXIGHIAPEYLST---GKSSEKTDVFGYGVMLLELITG 231
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 40 HSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 99
H K I+ +LK N +L+ + D + L G P Y APE +Q
Sbjct: 130 HQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTF----GNKLDAFCGAPPYAAPELFQ 185
Query: 100 -PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-RQEIP 148
+ GP E D W + +++G P G+++ E+ + V+R + IP
Sbjct: 186 GKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 233
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 9/107 (8%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
SL V ++A + Q + LH I+ +LKP N +L + R+ + +
Sbjct: 197 FSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV 256
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRG-PISFETDSWGFACSIIEMLTG 125
+ + R Y APE G PI D W C + E+LTG
Sbjct: 257 YTXIQSRF----YRAPEVILGARYGMPI----DMWSLGCILAELLTG 295
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 95 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 150
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 231
Query: 151 PSGLPPAVENVLLGCFEYDLRSRP 174
P+G P + +++ C+ YD+ +RP
Sbjct: 232 PAGCPREMYDLMNLCWTYDVENRP 255
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 14/179 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + + + ++ V R + Q + LHS ++ ++K N +L L
Sbjct: 102 GSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 158
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
D S + +GTP +MAPE + GP + D W IEM+ G
Sbjct: 159 DFGFCAQITPEQSKRSTM---VGTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEMIEG 212
Query: 126 VQPRCGRS-VDEIYDAVVRRQEIPPI--PSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
P + + +Y ++ P + P L + L C + D+ R ++L+
Sbjct: 213 EPPYLNENPLRALY--LIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 95 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 150
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 235
Query: 151 PSGLPPAVENVLLGCFEYDLRSRP 174
P+G P + +++ C+ YD+ +RP
Sbjct: 236 PAGCPREMYDLMNLCWTYDVENRP 259
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 95 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 150
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 235
Query: 151 PSGLPPAVENVLLGCFEYDLRSRP 174
P+G P + +++ C+ YD+ +RP
Sbjct: 236 PAGCPREMYDLMNLCWTYDVENRP 259
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 11/109 (10%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEAD----RAVLGDVXXXXXXXXXXXXSSDLPRRL 87
+ G+ LHS I +LKP N +L + + R + D ++
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIF 178
Query: 88 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE 136
GTP ++APE E P+ E D W +L+G P G + E
Sbjct: 179 GTPAFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 13/126 (10%)
Query: 23 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL---NEADRAVLGDVXXXXXXXXXXXX 79
S + R +D + LH GI+ +LKP N + +E + ++ D
Sbjct: 123 STLIRQVLD---AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVM 179
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD 139
S+ GTP Y+APE + P S D W +L G P + ++++
Sbjct: 180 ST----ACGTPGYVAPEVL---AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFE 232
Query: 140 AVVRRQ 145
+++ +
Sbjct: 233 QILKAE 238
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/194 (18%), Positives = 76/194 (39%), Gaps = 18/194 (9%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ + + + K K++L +YA+ + +G+ L S+ + +L N ++ + +G
Sbjct: 98 GSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIG 156
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
D + R + APE ++ +D W F ++ E+LT
Sbjct: 157 DFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL---MQSKFYIASDVWSFGVTLHELLTY 213
Query: 126 --------------VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 171
+ P G+ ++ + P P P V ++ C+E+
Sbjct: 214 CDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPS 273
Query: 172 SRPLMTDILRVFKS 185
+R +++ F++
Sbjct: 274 NRTSFQNLIEGFEA 287
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/194 (18%), Positives = 76/194 (39%), Gaps = 18/194 (9%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ + + + K K++L +YA+ + +G+ L S+ + +L N ++ + +G
Sbjct: 110 GSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIG 168
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
D + R + APE ++ +D W F ++ E+LT
Sbjct: 169 DFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL---MQSKFYIASDVWSFGVTLHELLTY 225
Query: 126 --------------VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 171
+ P G+ ++ + P P P V ++ C+E+
Sbjct: 226 CDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPS 285
Query: 172 SRPLMTDILRVFKS 185
+R +++ F++
Sbjct: 286 NRTSFQNLIEGFEA 299
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
SLS + + A ++A G+ L++ + +L N ++ E +GD
Sbjct: 129 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----E 183
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +M+PE + G + +D W F + E+ T QP G S +
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 240
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 241 QVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 167
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 168 CGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 167
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 168 CGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 106 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 164
S +D W F + E+L G +P + ++ +V +P P G P A+ ++L
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA-PMGCPHALHQLMLD 289
Query: 165 CFEYDLRSRPLMTDILRVFKS 185
C+ D RP + I+ V +
Sbjct: 290 CWHKDRAQRPRFSQIVSVLDA 310
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 167
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 168 CGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 75/186 (40%), Gaps = 26/186 (13%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + G KL+++ + A +A+G+ + + + NL+ N ++++ +
Sbjct: 88 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIA 147
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFA 116
D L R + Y A P +W PE G + ++D W F
Sbjct: 148 DF--------------GLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 193
Query: 117 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
+ E++T G P G + E+ + R + P P + ++ C++ RP
Sbjct: 194 ILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPT 252
Query: 176 MTDILR 181
D LR
Sbjct: 253 F-DYLR 257
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 106 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 164
S +D W F + E+L G +P + ++ +V +P P G P A+ ++L
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA-PMGCPHALHQLMLD 289
Query: 165 CFEYDLRSRPLMTDILRVFKS 185
C+ D RP + I+ V +
Sbjct: 290 CWHKDRAQRPRFSQIVSVLDA 310
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 166
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 167 CGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 6/119 (5%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V M +L G L+ + + + + LHSK I+ +LK N ++ L
Sbjct: 101 GAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLA 159
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR--GPISFETDSWGFACSIIEM 122
D +GTP +MAPE E P ++ D W ++IEM
Sbjct: 160 DFGVSAKNLKTLQKRDSF---IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 86 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 143
R+GTP++MAPE + R P D WG + +L+G P G + + +++ +++
Sbjct: 193 RVGTPHFMAPEVVK---REPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIK 246
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 86 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 143
R+GTP++MAPE + R P D WG + +L+G P G + + +++ +++
Sbjct: 195 RVGTPHFMAPEVVK---REPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIK 248
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 166
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 167 CGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 95 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 150
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 241
Query: 151 PSGLPPAVENVLLGCFEYDLRSRP 174
P+G P + +++ C+ YD+ +RP
Sbjct: 242 PAGCPREMYDLMNLCWTYDVENRP 265
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 6/119 (5%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
G+V M +L G L+ + + + + LHSK I+ +LK N ++ L
Sbjct: 93 GAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLA 151
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR--GPISFETDSWGFACSIIEM 122
D +GTP +MAPE E P ++ D W ++IEM
Sbjct: 152 DFGVSAKNLKTLQKRDSF---IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 167
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 168 CGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTP 90
+ + I HS GI+ NLKP N +L A +A V S+ GTP
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLL--ASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP 171
Query: 91 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
Y++PE + + P S D W + +L G P
Sbjct: 172 GYLSPEVLK---KDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 166
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 167 CGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 107 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 165
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 166 CGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 166
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 167 CGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTP 90
+ + I HS GI+ NLKP N +L A +A V S+ GTP
Sbjct: 113 ILESIAYCHSNGIVHRNLKPENLLL--ASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP 170
Query: 91 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
Y++PE + + P S D W + +L G P
Sbjct: 171 GYLSPEVLK---KDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTP 90
+ + I HS GI+ NLKP N +L A +A V S+ GTP
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLL--ASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP 171
Query: 91 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
Y++PE + + P S D W + +L G P
Sbjct: 172 GYLSPEVLK---KDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 167
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 168 CGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 166
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 167 CGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 166
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 167 CGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 166
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 167 CGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 167
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 168 CGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 166
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 167 CGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
SLS + + A ++A G+ L++ + +L N ++ E +GD
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----E 190
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +M+PE + G + +D W F + E+ T QP G S +
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLK---DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 247
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 248 QVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
SLS + + A ++A G+ L++ + +L N ++ E +GD
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----E 190
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +M+PE + G + +D W F + E+ T QP G S +
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLK---DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 247
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 248 QVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 167
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 168 CGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 166
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 167 XGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 166
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 167 XGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 166
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 167 XGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 166
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 167 XGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 95 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 150
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 249
Query: 151 PSGLPPAVENVLLGCFEYDLRSRP 174
P+G P + +++ C+ YD+ +RP
Sbjct: 250 PAGCPREMYDLMNLCWTYDVENRP 273
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 64/160 (40%), Gaps = 5/160 (3%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
S ++ ++ +AQG+ L SK + ++ N +L A +GD
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYD 139
RL +MAPE V + ++D W + + E+ + G+ P G V+ +
Sbjct: 222 VKGNARLPV-KWMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 277
Query: 140 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
+V+ P+ P + +++ C+ + RP I
Sbjct: 278 KLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 15/143 (10%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL + + +G+ +H+ GI+ +LKP N +NE + D
Sbjct: 120 MKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDF------G 173
Query: 75 XXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV 134
S++ + T Y APE +R + D W C + EM+T G+++
Sbjct: 174 LARQADSEMXGXVVTRWYRAPEVILNWMR--YTQTVDIWSVGCIMAEMIT------GKTL 225
Query: 135 DEIYDAVVRRQEIPPIPSGLPPA 157
+ D + + +EI + +G PPA
Sbjct: 226 FKGSDHLDQLKEIMKV-TGTPPA 247
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 167
Query: 87 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 128
GT Y+APE + R E D W + ML G P
Sbjct: 168 XGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 7/125 (5%)
Query: 19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 78
+L+ + Y + + + LHS I +++P N I+ + R+ +
Sbjct: 98 ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPEN-IIYQTRRS--STIKIIEFGQARQL 154
Query: 79 XSSDLPRRLGT-PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
D R L T P Y APE Q +V +S TD W + +L+G+ P + +I
Sbjct: 155 KPGDNFRLLFTAPEYYAPEVHQHDV---VSTATDMWSLGTLVYVLLSGINPFLAETNQQI 211
Query: 138 YDAVV 142
+ ++
Sbjct: 212 IENIM 216
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 9/107 (8%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
SL V ++A + Q + LH I+ +LKP N +L + R+ + +
Sbjct: 197 FSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV 256
Query: 80 SSDLPRRLGTPNYMAPEQWQPEVRG-PISFETDSWGFACSIIEMLTG 125
+ R Y APE G PI D W C + E+LTG
Sbjct: 257 YXXIQSRF----YRAPEVILGARYGMPI----DMWSLGCILAELLTG 295
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 70/171 (40%), Gaps = 11/171 (6%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + L + ++++D+ + + L + +L N +++E + A +
Sbjct: 90 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV 149
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
D + LP + + APE + S ++D W F + E+ +
Sbjct: 150 SDFGLTKEASSTQD-TGKLPVK-----WTAPEALR---EAAFSTKSDVWSFGILLWEIYS 200
Query: 125 -GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
G P + ++ V + ++ P G PPAV V+ C+ D RP
Sbjct: 201 FGRVPYPRIPLKDVVPRVEKGYKMDA-PDGCPPAVYEVMKNCWHLDAAMRP 250
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTP 90
+ + I HS GI+ NLKP N +L A +A V S+ GTP
Sbjct: 137 ILESIAYCHSNGIVHRNLKPENLLL--ASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP 194
Query: 91 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
Y++PE + + P S D W + +L G P
Sbjct: 195 GYLSPEVLK---KDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 71/169 (42%), Gaps = 14/169 (8%)
Query: 21 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 80
SLS + + A ++A G+ L++ + +L N + E +GD
Sbjct: 123 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY-----E 177
Query: 81 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
+D R+ G +M+PE + G + +D W F + E+ T QP G S +
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 234
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
++ V+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 235 QVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 40 HSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 99
H K I+ +LK N +L+ + D + L G+P Y APE +Q
Sbjct: 131 HQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTV----GNKLDTFCGSPPYAAPELFQ 186
Query: 100 -PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-RQEIP 148
+ GP E D W + +++G P G+++ E+ + V+R + IP
Sbjct: 187 GKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 95 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 150
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 251
Query: 151 PSGLPPAVENVLLGCFEYDLRSRP 174
P+G P + +++ C+ YD+ +RP
Sbjct: 252 PAGCPREMYDLMNLCWTYDVENRP 275
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 95 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 150
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 251
Query: 151 PSGLPPAVENVLLGCFEYDLRSRP 174
P+G P + +++ C+ YD+ +RP
Sbjct: 252 PAGCPREMYDLMNLCWTYDVENRP 275
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 70/171 (40%), Gaps = 11/171 (6%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + L + ++++D+ + + L + +L N +++E + A +
Sbjct: 84 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV 143
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
D + LP + P + +++ S ++D W F + E+ +
Sbjct: 144 SDFGLTKEASSTQD-TGKLPVKWTAPEALREKKF--------STKSDVWSFGILLWEIYS 194
Query: 125 -GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
G P + ++ V + ++ P G PPAV V+ C+ D RP
Sbjct: 195 FGRVPYPRIPLKDVVPRVEKGYKMDA-PDGCPPAVYEVMKNCWHLDAAMRP 244
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + + +H GI+ +LKP NF++ + ++ D ++
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD--SQV 217
Query: 88 GTPNYMAPEQWQP--------EVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEI 137
GT NYM PE + + + IS ++D W C + M G P + + ++
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 277
Query: 138 YDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ + EI P IP +++VL C + D + R + ++L
Sbjct: 278 HAIIDPNHEIEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 106 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 164
S ++D W F + E + G +P G E+ A++ + E P+G P + +++
Sbjct: 550 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNL 608
Query: 165 CFEYDLRSRP 174
C+ YD+ +RP
Sbjct: 609 CWTYDVENRP 618
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 70/171 (40%), Gaps = 11/171 (6%)
Query: 5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
+GS+ D + L + ++++D+ + + L + +L N +++E + A +
Sbjct: 99 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV 158
Query: 65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
D + LP + P + +++ S ++D W F + E+ +
Sbjct: 159 SDFGLTKEASSTQD-TGKLPVKWTAPEALREKKF--------STKSDVWSFGILLWEIYS 209
Query: 125 -GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
G P + ++ V + ++ P G PPAV V+ C+ D RP
Sbjct: 210 FGRVPYPRIPLKDVVPRVEKGYKMDA-PDGCPPAVYEVMKNCWHLDAAMRP 259
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 106 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 164
S ++D W F + E + G +P G E+ A++ + E P+G P + +++
Sbjct: 549 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNL 607
Query: 165 CFEYDLRSRP 174
C+ YD+ +RP
Sbjct: 608 CWTYDVENRP 617
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + + +H GI+ +LKP NF++ + ++ D ++
Sbjct: 113 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD--SQV 170
Query: 88 GTPNYMAPEQWQP--------EVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEI 137
GT NYM PE + + + IS ++D W C + M G P + + ++
Sbjct: 171 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 230
Query: 138 YDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ + EI P IP +++VL C + D + R + ++L
Sbjct: 231 HAIIDPNHEIEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 59/154 (38%), Gaps = 17/154 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV-XXXXXXXXXXXXSSDLPRR 86
Y ++ + LH GI+ ++K N +L+ VL D + D
Sbjct: 164 YVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF--- 220
Query: 87 LGTPNYMAPEQWQPEVRGPISFE---TDSWGFACSIIEMLTGVQPRC----GRSVDEIYD 139
GT YMAP+ VRG S D W + E+LTG P S EI
Sbjct: 221 CGTIEYMAPDI----VRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR 276
Query: 140 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
+++ + PP P + ++++ D + R
Sbjct: 277 RILKSE--PPYPQEMSALAKDLIQRLLMKDPKKR 308
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/188 (18%), Positives = 73/188 (38%), Gaps = 15/188 (7%)
Query: 2 KFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR 61
++ E D+ + K G+ S+ + +A G+ L + + +L N ++N
Sbjct: 126 EYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLV 185
Query: 62 AVLGD-----VXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
+ D V +P R P ++ ++ + +D W F
Sbjct: 186 CKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKF--------TSASDVWSFG 237
Query: 117 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
+ E++T G +P S E+ A+ +P P P A+ +++ C++ + RP
Sbjct: 238 IVMWEVMTYGERPYWELSNHEVMKAINDGFRLP-TPMDCPSAIYQLMMQCWQQERARRPK 296
Query: 176 MTDILRVF 183
DI+ +
Sbjct: 297 FADIVSIL 304
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + + +H GI+ +LKP NF++ + ++ D ++
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD--SQV 217
Query: 88 GTPNYMAPEQWQP--------EVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEI 137
GT NYM PE + + + IS ++D W C + M G P + + ++
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 277
Query: 138 YDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ + EI P IP +++VL C + D + R + ++L
Sbjct: 278 HAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELL 319
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 11/156 (7%)
Query: 18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
G+ S + YA + LHS ++ +LKP N ++++ + D
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
GTP +APE + + D W I EM G P +I
Sbjct: 196 WXLC------GTPEALAPE---IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
Y+ +V + PS ++++L + DL R
Sbjct: 247 YEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + + +H GI+ +LKP NF++ + ++ D ++
Sbjct: 112 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD--SQV 169
Query: 88 GTPNYMAPEQWQP--------EVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEI 137
GT NYM PE + + + IS ++D W C + M G P + + ++
Sbjct: 170 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 229
Query: 138 YDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ + EI P IP +++VL C + D + R + ++L
Sbjct: 230 HAIIDPNHEIEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD 66
L+L +V + L +G+ +HS ++ +LKP N ++NE +GD
Sbjct: 156 LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGD 202
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 58/161 (36%), Gaps = 19/161 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDL---- 83
+A D+A G+ LHS I+ +L N ++ E V+ D L
Sbjct: 113 FAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLK 172
Query: 84 -PRR------LGTPNYMAPEQWQPEVRGPISFETDSWGFA---CSIIEMLTGVQPRCGRS 133
P R +G P +MAPE + D + F C II + R+
Sbjct: 173 KPDRKKRYTVVGNPYWMAPEMINGR---SYDEKVDVFSFGIVLCEIIGRVNADPDYLPRT 229
Query: 134 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
+D + VR P PP+ + + C + D RP
Sbjct: 230 MD--FGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRP 268
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + + +H GI+ +LKP NF++ + ++ D ++
Sbjct: 132 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD--SQV 189
Query: 88 GTPNYMAPEQWQP--------EVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEI 137
GT NYM PE + + + IS ++D W C + M G P + + ++
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 249
Query: 138 YDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ + EI P IP +++VL C + D + R + ++L
Sbjct: 250 HAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELL 291
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + + +H GI+ +LKP NF++ + ++ D ++
Sbjct: 116 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD--SQV 173
Query: 88 GTPNYMAPEQWQP--------EVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEI 137
GT NYM PE + + + IS ++D W C + M G P + + ++
Sbjct: 174 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 233
Query: 138 YDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ + EI P IP +++VL C + D + R + ++L
Sbjct: 234 HAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 49/128 (38%), Gaps = 12/128 (9%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
+F E + + + K G L S + Y L +G+ H IL +LKP N ++N
Sbjct: 98 FEFMEKDLKKVLDENKTG-LQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG 156
Query: 61 RAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV-RGPISFET--DSWGFAC 117
L D + +P R T + P+V G + T D W C
Sbjct: 157 ALKLADFGLAR--------AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGC 208
Query: 118 SIIEMLTG 125
EM+TG
Sbjct: 209 IFAEMITG 216
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 21/146 (14%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 146 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 199
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG 131
++ + T Y APE W + D W C + E+LT G
Sbjct: 200 LARHTDDEMTGYVATRWYRAPEIMLNWM-----HYNMTVDIWSVGCIMAELLT------G 248
Query: 132 RSVDEIYDAVVRRQEIPPIPSGLPPA 157
R++ D + + Q+I + +G PPA
Sbjct: 249 RTLFPGTDHINQLQQIMRL-TGTPPA 273
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 47/128 (36%), Gaps = 12/128 (9%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
+F E + + + K G L S + Y L +G+ H IL +LKP N ++N
Sbjct: 98 FEFMEKDLKKVLDENKTG-LQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG 156
Query: 61 RAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV---RGPISFETDSWGFAC 117
L D + +P R T + P+V S D W C
Sbjct: 157 ALKLADFGLAR--------AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGC 208
Query: 118 SIIEMLTG 125
EM+TG
Sbjct: 209 IFAEMITG 216
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 50/139 (35%), Gaps = 7/139 (5%)
Query: 11 RMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXX 70
R +G L+L+ F + A L I+ +LKP N +L R+ + V
Sbjct: 128 RNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG 187
Query: 71 XXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC 130
+ R Y +PE + P D W C ++EM TG
Sbjct: 188 SSCQLGQRIYQXIQSRF----YRSPEVL---LGMPYDLAIDMWSLGCILVEMHTGEPLFS 240
Query: 131 GRSVDEIYDAVVRRQEIPP 149
G + + + +V IPP
Sbjct: 241 GANEVDQMNKIVEVLGIPP 259
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD 66
L+L +V + L +G+ +HS ++ +LKP N ++NE +GD
Sbjct: 155 LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGD 201
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 26/186 (13%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + G KL+++ + A +A+G+ + + + +L+ N ++++ +
Sbjct: 92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 151
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFA 116
D L R + Y A P +W PE G + ++D W F
Sbjct: 152 DF--------------GLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
Query: 117 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
+ E++T G P G + E+ + R + P P + ++ C++ RP
Sbjct: 198 ILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPT 256
Query: 176 MTDILR 181
D LR
Sbjct: 257 F-DYLR 261
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 26/186 (13%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + G KL+++ + A +A+G+ + + + +L+ N ++++ +
Sbjct: 102 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 161
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFA 116
D L R + Y A P +W PE G + ++D W F
Sbjct: 162 DF--------------GLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 207
Query: 117 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
+ E++T G P G + E+ + R + P P + ++ C++ RP
Sbjct: 208 ILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPT 266
Query: 176 MTDILR 181
D LR
Sbjct: 267 F-DYLR 271
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 50/139 (35%), Gaps = 7/139 (5%)
Query: 11 RMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXX 70
R +G L+L+ F + A L I+ +LKP N +L R+ + V
Sbjct: 147 RNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG 206
Query: 71 XXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC 130
+ R Y +PE + P D W C ++EM TG
Sbjct: 207 SSCQLGQRIYQXIQSRF----YRSPEVL---LGMPYDLAIDMWSLGCILVEMHTGEPLFS 259
Query: 131 GRSVDEIYDAVVRRQEIPP 149
G + + + +V IPP
Sbjct: 260 GANEVDQMNKIVEVLGIPP 278
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 26/186 (13%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + G KL+++ + A +A+G+ + + + +L+ N ++++ +
Sbjct: 97 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 156
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFA 116
D L R + Y A P +W PE G + ++D W F
Sbjct: 157 DF--------------GLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 202
Query: 117 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
+ E++T G P G + E+ + R + P P + ++ C++ RP
Sbjct: 203 ILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPT 261
Query: 176 MTDILR 181
D LR
Sbjct: 262 F-DYLR 266
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 14/117 (11%)
Query: 12 MAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXX 71
+ ++ G K S + + +G+ +HS G++ +LKP N +NE + D
Sbjct: 115 LQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDF---- 170
Query: 72 XXXXXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
+++ + T Y APE W + D W C + EMLTG
Sbjct: 171 --GLARHADAEMTGYVVTRWYRAPEVILSWMHYNQT-----VDIWSVGCIMAEMLTG 220
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 26/186 (13%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + G KL+++ + A +A+G+ + + + +L+ N ++++ +
Sbjct: 98 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 157
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFA 116
D L R + Y A P +W PE G + ++D W F
Sbjct: 158 DF--------------GLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 203
Query: 117 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
+ E++T G P G + E+ + R + P P + ++ C++ RP
Sbjct: 204 ILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPT 262
Query: 176 MTDILR 181
D LR
Sbjct: 263 F-DYLR 267
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 31.6 bits (70), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 87 LGTPNYMAPEQWQPEVRG--PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 144
+GTP +MAPE E P ++ D W ++IEM P + + + +
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS 255
Query: 145 QEIPPI---PSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
+ PP PS ++ L C E ++ +R + +L+
Sbjct: 256 E--PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 87 LGTPNYMAPEQWQPEVRG--PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 144
+GTP +MAPE E P ++ D W ++IEM P + + + +
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS 255
Query: 145 QEIPPI---PSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
+ PP PS ++ L C E ++ +R + +L+
Sbjct: 256 E--PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + + +H GI+ +LKP NF++ + ++ D ++
Sbjct: 132 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDXXXVVKD--SQV 189
Query: 88 GTPNYMAPEQWQP--------EVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEI 137
GT NYM PE + + + IS ++D W C + M G P + + ++
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 249
Query: 138 YDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ + EI P IP +++VL C + D + R + ++L
Sbjct: 250 HAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELL 291
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 87 LGTPNYMAPEQWQPEVRG--PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 144
+GTP +MAPE E P ++ D W ++IEM P + + + +
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS 255
Query: 145 QEIPPI---PSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
+ PP PS ++ L C E ++ +R + +L+
Sbjct: 256 E--PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 26/186 (13%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + G KL+++ + A +A+G+ + + + +L+ N ++++ +
Sbjct: 87 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 146
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFA 116
D L R + Y A P +W PE G + ++D W F
Sbjct: 147 DF--------------GLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 192
Query: 117 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
+ E++T G P G + E+ + R + P P + ++ C++ RP
Sbjct: 193 ILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPT 251
Query: 176 MTDILR 181
D LR
Sbjct: 252 F-DYLR 256
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 7/100 (7%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 91
L + + LH+ I+ +LKP N +L++ + L D L GTP
Sbjct: 209 LLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDF----GFSCHLEPGEKLRELCGTPG 264
Query: 92 YMAPEQWQ---PEVRGPISFETDSWGFACSIIEMLTGVQP 128
Y+APE + E E D W + +L G P
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 49/139 (35%), Gaps = 7/139 (5%)
Query: 11 RMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXX 70
R +G L+L+ F + A L I+ +LKP N +L R + V
Sbjct: 147 RNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFG 206
Query: 71 XXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC 130
+ R Y +PE + P D W C ++EM TG
Sbjct: 207 SSCQLGQRIYQXIQSRF----YRSPEVL---LGMPYDLAIDMWSLGCILVEMHTGEPLFS 259
Query: 131 GRSVDEIYDAVVRRQEIPP 149
G + + + +V IPP
Sbjct: 260 GANEVDQMNKIVEVLGIPP 278
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Query: 31 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 90
D++ + LH I+ +LKP N +L + ++ + +GT
Sbjct: 129 DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL-CTEFVGTL 187
Query: 91 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
Y+APE + + + D W F E +TG +P
Sbjct: 188 QYLAPELLE---QKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Query: 31 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 90
D++ + LH I+ +LKP N +L + ++ + +GT
Sbjct: 130 DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL-CTEFVGTL 188
Query: 91 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
Y+APE + + + D W F E +TG +P
Sbjct: 189 QYLAPELLE---QKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K LS +V L +G+ +HS GI+ +LKP N +NE + D
Sbjct: 123 VKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDF------G 176
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+L G
Sbjct: 177 LARQADEEMTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLQG 225
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 14/117 (11%)
Query: 12 MAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXX 71
+ ++ G + S + + +G+ +HS G++ +LKP N +NE + D
Sbjct: 133 LQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDF---- 188
Query: 72 XXXXXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
+++ + T Y APE W + D W C + EMLTG
Sbjct: 189 --GLARHADAEMTGYVVTRWYRAPEVILSWMHYNQT-----VDIWSVGCIMAEMLTG 238
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 17/165 (10%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y ++ + + +H GI+ +LKP NF++ + ++ D ++
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD--SQV 217
Query: 88 GTPNYMAPEQWQP--------EVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEI 137
G NYM PE + + + IS ++D W C + M G P + + ++
Sbjct: 218 GAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 277
Query: 138 YDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ + EI P IP +++VL C + D + R + ++L
Sbjct: 278 HAIIDPNHEIEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Query: 87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEIYDAVVRR 144
+GTP + APE ++ + + D + F +E T P C ++ +IY V
Sbjct: 191 IGTPEFXAPEXYEEKYDESV----DVYAFGXCXLEXATSEYPYSEC-QNAAQIYRRVTSG 245
Query: 145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
+ P V+ ++ GC + R + D+L
Sbjct: 246 VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 34/98 (34%), Gaps = 21/98 (21%)
Query: 35 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMA 94
GI LHS GI+ +LKP N ++ + D L R GT M
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG--------------LARTAGTSFMMT 183
Query: 95 PEQWQPEVRGP-------ISFETDSWGFACSIIEMLTG 125
PE R P D W C + EM+ G
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 73/180 (40%), Gaps = 14/180 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + G KL+++ + A +A+G+ + + + +L+ N ++++ +
Sbjct: 94 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 153
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
D ++ R G + APE G + ++D W F + E+
Sbjct: 154 DF-----GLARLIEDNEXTAREGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEI 205
Query: 123 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
+T G P G + E+ + R + P P + ++ C++ RP D LR
Sbjct: 206 VTHGRIPYPGMTNPEVIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 263
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDF------G 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + G KL+++ + A +A+G+ + + + +L+ N ++++ +
Sbjct: 92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 151
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEM 122
D ++ R G P +W PE G + ++D W F + E+
Sbjct: 152 DF-----GLARLIEDNEXTAREGAK---FPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 123 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
+T G P G + E+ + R + P P + ++ C++ RP D LR
Sbjct: 204 VTHGRIPYPGMTNPEVIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 261
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + G KL+++ + A +A+G+ + + + +L+ N ++++ +
Sbjct: 93 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 152
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEM 122
D ++ R G P +W PE G + ++D W F + E+
Sbjct: 153 DF-----GLARLIEDNEXTAREGAK---FPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 204
Query: 123 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
+T G P G + E+ + R + P P + ++ C++ RP D LR
Sbjct: 205 VTHGRIPYPGMTNPEVIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 262
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K LS +V L +G+ +HS GI+ +LKP N +NE + D
Sbjct: 123 VKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDF------G 176
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+L G
Sbjct: 177 LARQADEEMTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLQG 225
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD 66
+ + + +HS+GI+ NLKP N ++E+ +GD
Sbjct: 125 ILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGD 159
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 73/180 (40%), Gaps = 14/180 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + G KL+++ + A +A+G+ + + + +L+ N ++++ +
Sbjct: 92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 151
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
D ++ R G + APE G + ++D W F + E+
Sbjct: 152 DF-----GLARLIEDAEXTAREGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEI 203
Query: 123 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
+T G P G + E+ + R + P P + ++ C++ RP D LR
Sbjct: 204 VTHGRIPYPGMTNPEVIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 261
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 46/119 (38%), Gaps = 29/119 (24%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 79
L+ S++ Y + QG+ LH IL +LKP N +L+E L D
Sbjct: 109 LTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADF------------ 156
Query: 80 SSDLPRRLGTPN-----------YMAPE-QWQPEVRGPISFETDSWGFACSIIEMLTGV 126
L + G+PN Y APE + + G D W C + E+L V
Sbjct: 157 --GLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYG---VGVDMWAVGCILAELLLRV 210
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 73/180 (40%), Gaps = 14/180 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + G KL+++ + A +A+G+ + + + +L+ N ++++ +
Sbjct: 92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 151
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
D ++ R G + APE G + ++D W F + E+
Sbjct: 152 DF-----GLARLIEDNEXTAREGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEI 203
Query: 123 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
+T G P G + E+ + R + P P + ++ C++ RP D LR
Sbjct: 204 VTHGRIPYPGMTNPEVIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 261
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 73/180 (40%), Gaps = 14/180 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + G KL+++ + A +A+G+ + + + +L+ N ++++ +
Sbjct: 100 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 159
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
D ++ R G + APE G + ++D W F + E+
Sbjct: 160 DF-----GLARLIEDNEXTAREGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEI 211
Query: 123 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
+T G P G + E+ + R + P P + ++ C++ RP D LR
Sbjct: 212 VTHGRIPYPGMTNPEVIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 269
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 11/106 (10%)
Query: 39 LHSKGILVLNLKPFNFIL---NEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 95
LH GI+ +LKP N + E + ++ D ++ GTP Y+AP
Sbjct: 122 LHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA-----CGTPGYVAP 176
Query: 96 EQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 141
E + P S D W +L G P + ++++ +
Sbjct: 177 EVL---AQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKI 219
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 57
LS V Y ++L + + ++H GI+ ++KP NF+ N
Sbjct: 114 LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYN 151
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 73/180 (40%), Gaps = 14/180 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + G KL+++ + A +A+G+ + + + +L+ N ++++ +
Sbjct: 101 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 160
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
D ++ R G + APE G + ++D W F + E+
Sbjct: 161 DF-----GLARLIEDNEXTAREGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEI 212
Query: 123 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
+T G P G + E+ + R + P P + ++ C++ RP D LR
Sbjct: 213 VTHGRIPYPGMTNPEVIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 270
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 110 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 168
+D W + + E+++ G +P S ++ A+ +PP P P A+ ++L C++
Sbjct: 194 SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPP-PMDCPIALHQLMLDCWQK 252
Query: 169 DLRSRPLMTDILRVF 183
+ RP I+ +
Sbjct: 253 ERSDRPKFGQIVNML 267
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 110 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 168
+D W + + E+++ G +P S ++ A+ +PP P P A+ ++L C++
Sbjct: 200 SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPP-PMDCPIALHQLMLDCWQK 258
Query: 169 DLRSRPLMTDILRVF 183
+ RP I+ +
Sbjct: 259 ERSDRPKFGQIVNML 273
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 73/180 (40%), Gaps = 14/180 (7%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + G KL+++ + A +A+G+ + + + +L+ N ++++ +
Sbjct: 98 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 157
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
D ++ R G + APE G + ++D W F + E+
Sbjct: 158 DF-----GLARLIEDNEXTAREGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEI 209
Query: 123 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
+T G P G + E+ + R + P P + ++ C++ RP D LR
Sbjct: 210 VTHGRIPYPGMTNPEVIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 267
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 110 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 168
+D W + + E+++ G +P S ++ A+ +PP P P A+ ++L C++
Sbjct: 215 SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPP-PMDCPIALHQLMLDCWQK 273
Query: 169 DLRSRPLMTDILRVF 183
+ RP I+ +
Sbjct: 274 ERSDRPKFGQIVNML 288
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 123 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDF------G 176
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 119 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDF------G 172
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 221
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 46/135 (34%), Gaps = 23/135 (17%)
Query: 35 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMA 94
GI LHS GI+ +LKP N ++ + D L R GT M
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG--------------LARTAGTSFMME 183
Query: 95 PEQWQPEVRGP-------ISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--Q 145
PE R P D W C + EM+ GR + ++ V+ +
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGT 243
Query: 146 EIPPIPSGLPPAVEN 160
P L P V N
Sbjct: 244 PCPAFMKKLQPTVRN 258
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 10/156 (6%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
R+ + I H I+ +LKP N +L++ + D + L
Sbjct: 112 RFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD----GNFLKTS 167
Query: 87 LGTPNYMAPEQWQPEVR-GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ 145
G+PNY APE ++ GP E D W + ML G P + ++ V
Sbjct: 168 CGSPNYAAPEVINGKLYAGP---EVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV--NS 222
Query: 146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
+ +P L P ++++ D R + +I R
Sbjct: 223 CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 113 VKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 166
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 215
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 3/110 (2%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 91
+ + +L H G++ +LKP N +L + + GTP
Sbjct: 112 ILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPG 171
Query: 92 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 141
Y++PE + E G D W + +L G P ++Y +
Sbjct: 172 YLSPEVLRKEAYGK---PVDIWACGVILYILLVGYPPFWDEDQHKLYQQI 218
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDF------G 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 16/115 (13%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVXXXXXX 73
+K KL+ +V + +G+ +HS I+ +LKP N +NE + +LG
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILG-------F 169
Query: 74 XXXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 170 GLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDF------G 175
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 224
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDF------G 175
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 224
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------Y 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 128 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDF------G 181
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 230
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 9/114 (7%)
Query: 27 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSS----- 81
R D+A + LH+KGI +LKP N + ++ + +S
Sbjct: 115 RVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPIT 174
Query: 82 --DLPRRLGTPNYMAPEQWQPEVRGPISFE--TDSWGFACSIIEMLTGVQPRCG 131
+L G+ YMAPE + ++ D W + ML+G P G
Sbjct: 175 TPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVG 228
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 10/103 (9%)
Query: 19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 78
K+S R+ + + H I+ +LKP N +L+E + D
Sbjct: 109 KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADF----GLSNIMT 164
Query: 79 XSSDLPRRLGTPNYMAPEQWQPEVR-GPISFETDSWGFACSII 120
+ L G+PNY APE ++ GP E D W +C +I
Sbjct: 165 DGNFLKTSCGSPNYAAPEVISGKLYAGP---EVDVW--SCGVI 202
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 10/103 (9%)
Query: 19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 78
K+S R+ + + H I+ +LKP N +L+E + D
Sbjct: 108 KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADF----GLSNIMT 163
Query: 79 XSSDLPRRLGTPNYMAPEQWQPEVR-GPISFETDSWGFACSII 120
+ L G+PNY APE ++ GP E D W +C +I
Sbjct: 164 DGNFLKTSCGSPNYAAPEVISGKLYAGP---EVDVW--SCGVI 201
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA 62
KLSL V A + + +HSK L ++KP NF++ RA
Sbjct: 99 KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 142
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 10/103 (9%)
Query: 19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 78
K+S R+ + + H I+ +LKP N +L+E + D
Sbjct: 103 KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADF----GLSNIMT 158
Query: 79 XSSDLPRRLGTPNYMAPEQWQPEVR-GPISFETDSWGFACSII 120
+ L G+PNY APE ++ GP E D W +C +I
Sbjct: 159 DGNFLKTSCGSPNYAAPEVISGKLYAGP---EVDVW--SCGVI 196
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 177
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ ++ + T Y APE W + D W C + E+LTG
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 123 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 176
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 225
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 10/103 (9%)
Query: 19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 78
K+S R+ + + H I+ +LKP N +L+E + D
Sbjct: 99 KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADF----GLSNIMT 154
Query: 79 XSSDLPRRLGTPNYMAPEQWQPEVR-GPISFETDSWGFACSII 120
+ L G+PNY APE ++ GP E D W +C +I
Sbjct: 155 DGNFLKTSCGSPNYAAPEVISGKLYAGP---EVDVW--SCGVI 192
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 177
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ ++ + T Y APE W + D W C + E+LTG
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 177
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
+ ++ + T Y APE W + D W C + E+LTG
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 226
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 7/100 (7%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 91
L + I LH I+ +LKP N +L++ L D L GTP+
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP----GEKLREVCGTPS 188
Query: 92 YMAPEQWQPEVRGP---ISFETDSWGFACSIIEMLTGVQP 128
Y+APE + + E D W + +L G P
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 38/206 (18%), Positives = 77/206 (37%), Gaps = 34/206 (16%)
Query: 6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
GS+ D + + K ++ + +Y + +G+ L +K + NL N ++ +R +G
Sbjct: 99 GSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIG 157
Query: 66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ-----WQPE--VRGPISFETDSWGFACS 118
D + LP+ P + + PE S +D W F
Sbjct: 158 DFGL----------TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 207
Query: 119 IIEMLTGVQP---------------RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLL 163
+ E+ T ++ + G+ + +++ P P G P + ++
Sbjct: 208 LYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMT 267
Query: 164 GCFEYDLRSRPLMTDI-LRVFKSSQN 188
C+ ++ RP D+ LRV + N
Sbjct: 268 ECWNNNVNQRPSFRDLALRVDQIRDN 293
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 123 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 176
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 225
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 136 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 189
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLTG 238
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 11/100 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D + +P R
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRT 159
Query: 88 GTPNYMAPEQWQPEV---RGPISFETDSWGFACSIIEMLT 124
T + PE+ S D W C EM+T
Sbjct: 160 YTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 137 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 190
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLTG 239
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K LS +V L +G+ +HS GI+ +LKP N +NE + D
Sbjct: 115 VKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDF------G 168
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+L G
Sbjct: 169 LARQADEEMTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLQG 217
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 127 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 180
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 181 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 229
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDA------G 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 11/100 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D + +P R
Sbjct: 115 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRT 166
Query: 88 GTPNYMAPEQWQPEV-RGPISFET--DSWGFACSIIEMLT 124
T + PE+ G + T D W C EM+T
Sbjct: 167 YTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 136 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 189
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLTG 238
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 11/100 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D + +P R
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRT 158
Query: 88 GTPNYMAPEQWQPEVR---GPISFETDSWGFACSIIEMLT 124
T + PE+ S D W C EM+T
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 11/100 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D + +P R
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRT 159
Query: 88 GTPNYMAPEQWQPEVR---GPISFETDSWGFACSIIEMLT 124
T + PE+ S D W C EM+T
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 46/137 (33%), Gaps = 31/137 (22%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
+F + D M + L + Y L QG+ HS +L +LKP N ++N
Sbjct: 81 FEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEG 140
Query: 61 RAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN-----------YMAPEQWQPEVRGPISFE 109
L D L R G P Y APE + G +
Sbjct: 141 AIKLADF--------------GLARAFGVPVRTYXHEVVTLWYRAPEI----LLGCKYYS 182
Query: 110 T--DSWGFACSIIEMLT 124
T D W C EM+T
Sbjct: 183 TAVDIWSLGCIFAEMVT 199
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 137 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 190
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 191 LARHTDDEMXGXVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLTG 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 137 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 190
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLTG 239
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 11/100 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D + +P R
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRT 160
Query: 88 GTPNYMAPEQWQPEVR---GPISFETDSWGFACSIIEMLT 124
T + PE+ S D W C EM+T
Sbjct: 161 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 110 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 168
+D W + + E+++ G +P + ++ AV +P P P A+ ++L C++
Sbjct: 208 SDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPS-PMDCPAALYQLMLDCWQK 266
Query: 169 DLRSRPLMTDILRVF 183
+ SRP +I+ +
Sbjct: 267 ERNSRPKFDEIVNML 281
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 175
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 224
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 119 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 172
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 221
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 115 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 168
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 169 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 217
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 116 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 169
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 170 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 218
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 11/100 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D + +P R
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRT 159
Query: 88 GTPNYMAPEQWQPEVR---GPISFETDSWGFACSIIEMLT 124
T + PE+ S D W C EM+T
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 113 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 166
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 215
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 113 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 166
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 215
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 11/100 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D + +P R
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRT 158
Query: 88 GTPNYMAPEQWQPEVR---GPISFETDSWGFACSIIEMLT 124
T + PE+ S D W C EM+T
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 11/100 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D + +P R
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRT 159
Query: 88 GTPNYMAPEQWQPEVR---GPISFETDSWGFACSIIEMLT 124
T + PE+ S D W C EM+T
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD 66
+ + + +HS+GI+ +LKP N ++E+ +GD
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGD 159
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 11/100 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D + +P R
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRT 158
Query: 88 GTPNYMAPEQWQPEVR---GPISFETDSWGFACSIIEMLT 124
T + PE+ S D W C EM+T
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 11/100 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D + +P R
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRT 158
Query: 88 GTPNYMAPEQWQPEVR---GPISFETDSWGFACSIIEMLT 124
T + PE+ S D W C EM+T
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 7/100 (7%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 91
L + I LH I+ +LKP N +L++ L D L GTP+
Sbjct: 120 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP----GEKLREVCGTPS 175
Query: 92 YMAPEQWQPEVRGP---ISFETDSWGFACSIIEMLTGVQP 128
Y+APE + + E D W + +L G P
Sbjct: 176 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGXVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 123 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 176
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 128 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 181
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 230
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 119 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 172
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 221
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD 66
+ + + +HS+GI+ +LKP N ++E+ +GD
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGD 159
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 114 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 167
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 216
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 119 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 172
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 129 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 182
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 231
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDY------G 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 129 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 182
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 231
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 8/111 (7%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE + + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNAMH--YNQTVDIWSVGCIMAELLTG 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 177
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 178 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 226
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 11/100 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D + +P R
Sbjct: 112 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRT 163
Query: 88 GTPNYMAPEQWQPEVR---GPISFETDSWGFACSIIEMLT 124
T + PE+ S D W C EM+T
Sbjct: 164 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 7/100 (7%)
Query: 32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 91
L + I LH I+ +LKP N +L++ L D L GTP+
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP----GEKLRSVCGTPS 188
Query: 92 YMAPEQWQPEVRGP---ISFETDSWGFACSIIEMLTGVQP 128
Y+APE + + E D W + +L G P
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 129 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 182
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 231
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 140 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 193
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 194 LARHTDDEMTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLTG 242
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 175
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 224
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 11/100 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D + +P R
Sbjct: 115 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRT 166
Query: 88 GTPNYMAPEQWQPEVR---GPISFETDSWGFACSIIEMLT 124
T + PE+ S D W C EM+T
Sbjct: 167 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 114 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 167
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 216
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD------RG 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 11/100 (11%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D + +P R
Sbjct: 108 YLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRT 159
Query: 88 GTPNYMAPEQWQPEVR---GPISFETDSWGFACSIIEMLT 124
T + PE+ S D W C EM+T
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 140 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 193
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 194 LARHTDDEMXGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 242
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 46/137 (33%), Gaps = 31/137 (22%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
+F + D M + L + Y L QG+ HS +L +LKP N ++N
Sbjct: 83 FEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 142
Query: 61 RAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN-----------YMAPEQWQPEVRGPISFE 109
L D L R G P Y APE + G +
Sbjct: 143 AIKLADF--------------GLARAFGVPVRTYXHEVVTLWYRAPEI----LLGCKYYS 184
Query: 110 T--DSWGFACSIIEMLT 124
T D W C EM+T
Sbjct: 185 TAVDIWSLGCIFAEMVT 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAF 154
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 155 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 46/137 (33%), Gaps = 31/137 (22%)
Query: 1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
+F + D M + L + Y L QG+ HS +L +LKP N ++N
Sbjct: 84 FEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 143
Query: 61 RAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN-----------YMAPEQWQPEVRGPISFE 109
L D L R G P Y APE + G +
Sbjct: 144 AIKLADF--------------GLARAFGVPVRTYXHEVVTLWYRAPEI----LLGCKYYS 185
Query: 110 T--DSWGFACSIIEMLT 124
T D W C EM+T
Sbjct: 186 TAVDIWSLGCIFAEMVT 202
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAF 154
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 155 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADF--------------GLARAF 154
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 155 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAF 156
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 157 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 110 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAF 155
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 156 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 110 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADF--------------GLARAF 155
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 156 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADF--------------GLARAF 154
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 155 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAF 156
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 157 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAF 153
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 154 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAF 156
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 157 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADF--------------GLARAF 156
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 157 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAF 152
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 153 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAF 153
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 154 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD------GG 170
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 112 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAF 157
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 158 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAF 156
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 157 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 110 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAF 155
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 156 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAF 152
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 153 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAF 153
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 154 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 31/110 (28%)
Query: 28 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
Y L QG+ HS +L +LKP N ++N L D L R
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAF 153
Query: 88 GTPN-----------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
G P Y APE + G + T D W C EM+T
Sbjct: 154 GVPVRTYXHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 9/111 (8%)
Query: 31 DLAQGILQLHSKGILVLNLKPFNFIL---NEADRAVLGDVXXXXXXXXXXXXS----SDL 83
D+A + LH+KGI +LKP N + N+ + D S +L
Sbjct: 119 DVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPEL 178
Query: 84 PRRLGTPNYMAPEQWQP--EVRGPISFETDSWGFACSIIEMLTGVQPRCGR 132
G+ YMAPE + E D W + +L+G P GR
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 15 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 113 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 166
Query: 75 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 125
++ + T Y APE W + D W C + E+LTG
Sbjct: 167 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 215
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,169,167
Number of Sequences: 62578
Number of extensions: 630610
Number of successful extensions: 2349
Number of sequences better than 100.0: 693
Number of HSP's better than 100.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 541
Number of HSP's that attempted gapping in prelim test: 1780
Number of HSP's gapped (non-prelim): 737
length of query: 503
length of database: 14,973,337
effective HSP length: 103
effective length of query: 400
effective length of database: 8,527,803
effective search space: 3411121200
effective search space used: 3411121200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)