Citrus Sinensis ID: 010718

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500---
MLNFCKLFIFIFLVSAVSLSSSSNAGSEYSQAECLKVPASSFMSSLKTTVDAIQQTVLISLISLLMSSAGPSLLPKIPTGRHNGSGDLSSDLRTWLSAALINQETCIDGFDGTNSIVKGVVSGSLNQISSSVQELLTMVHPSPSQWSNEGSSSNSGGKSRGGGGKSSGQFPHWFKREDRKLLLVNGVQADVVVAADGTGNFTKIMDAVLAAEDYSMKRFVIYIKRGVYKENVEIKKKKWNLMMVGDGIDATIISGNRNFMDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVYFRCAIKGYQDSLYTHTMRQFFRECKISGTVDFIFGDATAMFQNCQILAKKGLDNQKNTITAHGRKDPNEPTGFSIQFCNITADSDLLPFVNSTETYLGRPWKLYSRTVFMQSYMSNVIRPKGWLEWNNDFALDTLYYGEYKNYGPGGGLATRITWPGYHILNNAVQANNFTVAQFLEGNLWLPSTGVKYTAGLQV
ccccHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccHHHHHHHHHcccccEEEEEEEccEEEEEEEEccccccEEEEEccccccEEEEccccccccccccEEEEEEECccCEEEccEEEEccccccccEEEEEEcccEEEEEccEEEEccccEEcccccEEEEccEEEECccCEEEccEEEEEccEEEEEccccccccEEEEccccccccccEEEEEccEEEccccccccccccccccccccccccEEEEEccccccccccccccccccccccccCEEEEEcccccccccccccccccccccccHHHHHccccccccccccccccccccccccccc
**NFCKLFIFIFLVSAVS***************CLKVPA*SFMSSLKTTVDAIQQTVLISLISLLMSSAGPSL****************SDLRTWLSAALINQETCIDGFDGTNSIVKGVVSGSLNQ**SSVQELLTMVHPS*****************************HWFKREDRKLLLVNGVQADVVVAADGTGNFTKIMDAVLAAEDYSMKRFVIYIKRGVYKENVEIKKKKWNLMMVGDGIDATIISGNRNFMDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVYFRCAIKGYQDSLYTHTMRQFFRECKISGTVDFIFGDATAMFQNCQILAKKGLDNQKNTITAHGRKDPNEPTGFSIQFCNITADSDLLPFVNSTETYLGRPWKLYSRTVFMQSYMSNVIRPKGWLEWNNDFALDTLYYGEYKNYGPGGGLATRITWPGYHILNNAVQANNFTVAQFLEGNLWLPSTGVKYTAGLQV
xxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLNFCKLFIFIFLVSAVSLSSSSNAGSEYSQAECLKVPASSFMSSLKTTVDAIQQTVLISLISLLMSSAGPSLLPKIPTGRHNGSGDLSSDLRTWLSAALINQETCIDGFDGTNSIVKGVVSGSLNQISSSVQELLTMVHPSPSQWSNEGSSSNSGGKSRGGGGKSSGQFPHWFKREDRKLLLVNGVQADVVVAADGTGNFTKIMDAVLAAEDYSMKRFVIYIKRGVYKENVEIKKKKWNLMMVGDGIDATIISGNRNFMDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVYFRCAIKGYQDSLYTHTMRQFFRECKISGTVDFIFGDATAMFQNCQILAKKGLDNQKNTITAHGRKDPNEPTGFSIQFCNITADSDLLPFVNSTETYLGRPWKLYSRTVFMQSYMSNVIRPKGWLEWNNDFALDTLYYGEYKNYGPGGGLATRITWPGYHILNNAVQANNFTVAQFLEGNLWLPSTGVKYTAGLQV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable pectinesterase/pectinesterase inhibitor 32 Acts in the modification of cell walls via demethylesterification of cell wall pectin.probableQ9LXK7
Pectinesterase/pectinesterase inhibitor PPE8B May have roles in the deposition of pectin in developing tissues and in the wall loosening and cell separation that occurs in cell expansion, fruit ripening and abscission.probableQ43062

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.1.-.-Acting on ester bonds.probable
3.1.1.-Carboxylic ester hydrolases.probable
3.1.1.11Pectinesterase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GQ8, chain A
Confidence level:very confident
Coverage over the Query: 187-501
View the alignment between query and template
View the model in PyMOL
Template: 1X91, chain A
Confidence level:confident
Coverage over the Query: 37-143
View the alignment between query and template
View the model in PyMOL