Query 010723
Match_columns 502
No_of_seqs 498 out of 3417
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 12:54:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010723.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010723hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 100.0 3.2E-33 1.1E-37 285.5 27.9 269 20-305 119-388 (407)
2 4hb9_A Similarities with proba 100.0 2.3E-32 7.8E-37 279.1 23.2 250 22-278 106-382 (412)
3 2vou_A 2,6-dihydroxypyridine h 100.0 4.4E-29 1.5E-33 254.0 27.5 241 24-279 95-367 (397)
4 2xdo_A TETX2 protein; tetracyc 100.0 2.8E-29 9.5E-34 255.6 25.8 241 23-275 123-380 (398)
5 2qa2_A CABE, polyketide oxygen 100.0 2E-29 6.9E-34 263.3 21.8 245 18-278 97-348 (499)
6 3fmw_A Oxygenase; mithramycin, 100.0 1.2E-30 4.1E-35 276.2 10.7 284 18-324 138-432 (570)
7 2qa1_A PGAE, polyketide oxygen 100.0 3.9E-29 1.4E-33 261.2 22.0 245 18-278 96-347 (500)
8 2x3n_A Probable FAD-dependent 100.0 1.4E-29 4.8E-34 257.9 15.8 268 20-307 99-378 (399)
9 3c96_A Flavin-containing monoo 100.0 9.6E-28 3.3E-32 245.2 25.8 238 22-274 101-366 (410)
10 3alj_A 2-methyl-3-hydroxypyrid 99.9 3.6E-28 1.2E-32 245.7 13.0 233 22-274 101-344 (379)
11 1pn0_A Phenol 2-monooxygenase; 99.9 4.2E-27 1.4E-31 253.5 21.3 241 21-278 112-421 (665)
12 1k0i_A P-hydroxybenzoate hydro 99.9 9.3E-28 3.2E-32 243.9 14.4 281 20-318 95-386 (394)
13 2r0c_A REBC; flavin adenine di 99.9 2.7E-26 9.2E-31 242.7 20.2 236 21-277 131-378 (549)
14 3ihg_A RDME; flavoenzyme, anth 99.9 1.9E-26 6.3E-31 243.7 18.4 240 22-277 114-370 (535)
15 2dkh_A 3-hydroxybenzoate hydro 99.9 8.5E-26 2.9E-30 242.9 18.0 241 20-275 133-409 (639)
16 3c4a_A Probable tryptophan hyd 99.9 4.6E-26 1.6E-30 230.4 11.3 250 22-304 92-353 (381)
17 3atr_A Conserved archaeal prot 99.9 6.9E-24 2.4E-28 219.3 20.9 244 21-278 93-353 (453)
18 3e1t_A Halogenase; flavoprotei 99.9 5.3E-23 1.8E-27 215.9 26.6 249 18-275 101-364 (512)
19 3oz2_A Digeranylgeranylglycero 99.9 7.4E-23 2.5E-27 207.2 25.4 237 18-268 92-338 (397)
20 3cgv_A Geranylgeranyl reductas 99.9 2.6E-22 8.8E-27 203.7 26.4 244 19-278 93-348 (397)
21 3i3l_A Alkylhalidase CMLS; fla 99.9 5.4E-22 1.9E-26 210.3 20.8 249 18-276 118-377 (591)
22 2gmh_A Electron transfer flavo 99.9 1.1E-20 3.9E-25 200.6 20.5 238 22-269 138-414 (584)
23 3nix_A Flavoprotein/dehydrogen 99.8 3.3E-20 1.1E-24 189.8 20.4 242 18-271 96-350 (421)
24 4h87_A Kanadaptin; FHA domain 99.8 1E-20 3.5E-25 158.9 10.6 100 366-480 19-129 (130)
25 2pyx_A Tryptophan halogenase; 99.8 2.4E-19 8.2E-24 188.7 22.8 234 19-275 166-410 (526)
26 3va4_A Mediator of DNA damage 99.8 3.8E-20 1.3E-24 155.6 12.2 101 369-486 26-130 (132)
27 2weu_A Tryptophan 5-halogenase 99.8 4.7E-19 1.6E-23 186.0 22.6 229 19-275 164-402 (511)
28 2aqj_A Tryptophan halogenase, 99.8 5.2E-19 1.8E-23 186.7 17.5 228 19-274 156-393 (538)
29 3gqs_A Adenylate cyclase-like 99.8 4.3E-19 1.5E-23 144.3 12.0 98 365-481 2-101 (106)
30 3els_A PRE-mRNA leakage protei 99.8 1.6E-19 5.5E-24 156.4 9.8 100 365-472 29-145 (158)
31 1uht_A Expressed protein; FHA 99.8 8.1E-19 2.8E-23 145.7 12.6 93 366-472 11-104 (118)
32 2kb3_A Oxoglutarate dehydrogen 99.8 7.2E-19 2.5E-23 150.0 11.8 101 359-481 38-139 (143)
33 2pie_A E3 ubiquitin-protein li 99.8 7E-19 2.4E-23 150.0 11.6 105 362-482 4-117 (138)
34 3po8_A RV0020C protein, putati 99.8 8.3E-19 2.8E-23 141.1 11.3 83 380-482 15-97 (100)
35 2e4g_A Tryptophan halogenase; 99.8 4.5E-18 1.6E-22 179.8 20.3 230 19-275 185-425 (550)
36 2xt9_B Putative signal transdu 99.8 1.6E-18 5.5E-23 143.1 12.6 98 362-481 6-104 (115)
37 2csw_A Ubiquitin ligase protei 99.8 6.8E-19 2.3E-23 151.3 8.2 95 362-472 12-111 (145)
38 2kfu_A RV1827 PThr 22; FHA dom 99.8 2.2E-18 7.5E-23 149.6 10.5 96 365-482 53-149 (162)
39 1gxc_A CHK2, CDS1, serine/thre 99.8 4.9E-18 1.7E-22 146.7 12.5 104 361-482 23-141 (149)
40 2jqj_A DNA damage response pro 99.8 2.8E-18 9.6E-23 148.6 11.0 97 367-482 17-122 (151)
41 1r21_A Antigen KI-67; beta san 99.8 1.8E-18 6.3E-23 145.7 9.1 85 380-483 25-109 (128)
42 3ihm_A Styrene monooxygenase A 99.8 5.8E-18 2E-22 173.6 14.8 230 21-274 115-372 (430)
43 3elv_A PRE-mRNA leakage protei 99.8 1.7E-18 5.7E-23 154.0 9.2 119 347-473 47-193 (205)
44 2jpe_A Nuclear inhibitor of pr 99.8 3.7E-19 1.3E-23 152.2 4.6 92 366-472 33-128 (140)
45 1lgp_A Cell cycle checkpoint p 99.7 4E-18 1.4E-22 141.2 10.2 100 367-482 3-111 (116)
46 1mzk_A Kinase associated prote 99.7 1.1E-17 3.8E-22 142.7 12.9 93 368-472 8-112 (139)
47 3oun_A Putative uncharacterize 99.7 4.7E-18 1.6E-22 145.8 9.2 80 380-479 77-156 (157)
48 1dmz_A Protein (protein kinase 99.7 7.2E-18 2.5E-22 146.7 10.3 97 369-482 7-125 (158)
49 3hx1_A SLR1951 protein; P74513 99.7 1.5E-17 5.2E-22 139.9 10.8 88 368-474 12-109 (131)
50 1qu5_A Protein kinase SPK1; FH 99.7 5.8E-18 2E-22 150.2 7.0 109 358-482 19-149 (182)
51 1g3g_A Protien kinase SPK1; FH 99.7 2.4E-17 8.3E-22 144.5 9.7 104 366-482 32-148 (164)
52 1wln_A Afadin; beta sandwich, 99.7 6.6E-17 2.2E-21 134.3 11.0 84 380-481 28-113 (120)
53 1g6g_A Protein kinase RAD53; b 99.7 4E-16 1.4E-20 130.9 12.3 79 393-482 37-120 (127)
54 2ff4_A Probable regulatory pro 99.6 2.6E-16 8.8E-21 158.6 9.7 88 381-487 299-386 (388)
55 3huf_A DNA repair and telomere 99.6 9.1E-15 3.1E-19 137.0 10.3 101 367-481 1-113 (325)
56 3fm8_A Kinesin-like protein KI 99.6 2.1E-14 7.1E-19 118.6 11.3 94 367-480 26-122 (124)
57 4ejq_A Kinesin-like protein KI 99.5 3.7E-14 1.3E-18 122.6 11.1 99 368-481 39-143 (154)
58 2bry_A NEDD9 interacting prote 99.4 3.6E-13 1.2E-17 140.2 7.0 66 23-88 161-236 (497)
59 3uv0_A Mutator 2, isoform B; F 99.3 2.1E-12 7E-17 99.1 7.3 67 391-472 20-93 (102)
60 4a0e_A YSCD, type III secretio 99.3 7.6E-12 2.6E-16 101.3 9.9 95 366-482 3-98 (123)
61 3kt9_A Aprataxin; FHA domain, 99.3 6.4E-11 2.2E-15 93.3 11.8 92 368-479 5-98 (102)
62 3i6u_A CDS1, serine/threonine- 99.1 8.6E-11 2.9E-15 119.8 9.8 100 364-480 6-119 (419)
63 2brf_A Bifunctional polynucleo 99.1 1E-09 3.5E-14 87.3 11.8 99 364-481 6-106 (110)
64 1yvv_A Amine oxidase, flavin-c 99.0 4E-09 1.4E-13 103.7 13.0 200 27-241 109-329 (336)
65 1yj5_C 5' polynucleotide kinas 98.9 1.2E-08 4.1E-13 83.9 12.4 96 366-480 8-105 (143)
66 4egx_A Kinesin-like protein KI 98.9 8.6E-09 2.9E-13 91.3 12.3 98 368-481 69-173 (184)
67 1ujx_A Polynucleotide kinase 3 98.9 4.9E-09 1.7E-13 84.3 7.2 97 366-481 15-113 (119)
68 1wv3_A Similar to DNA segregat 98.6 5E-08 1.7E-12 90.4 6.3 68 393-479 93-166 (238)
69 1ryi_A Glycine oxidase; flavop 98.1 7.1E-06 2.4E-10 81.8 9.5 194 23-237 159-361 (382)
70 2gag_B Heterotetrameric sarcos 97.9 0.00012 3.9E-09 73.5 13.2 63 25-88 171-237 (405)
71 1y56_B Sarcosine oxidase; dehy 97.7 0.00015 5.1E-09 72.2 11.1 64 24-88 145-212 (382)
72 3ps9_A TRNA 5-methylaminomethy 97.6 0.00052 1.8E-08 73.9 13.7 64 20-83 409-474 (676)
73 2gf3_A MSOX, monomeric sarcosi 97.5 0.00081 2.8E-08 66.8 13.6 60 23-83 145-206 (389)
74 3pvc_A TRNA 5-methylaminomethy 97.4 0.00054 1.8E-08 73.9 11.0 64 20-83 404-470 (689)
75 3dme_A Conserved exported prot 97.3 0.0039 1.3E-07 61.1 15.0 67 22-88 144-216 (369)
76 3nyc_A D-arginine dehydrogenas 97.3 0.0012 4.2E-08 65.2 11.3 66 22-88 148-216 (381)
77 2qcu_A Aerobic glycerol-3-phos 97.2 0.0044 1.5E-07 64.0 14.6 207 24-239 145-373 (501)
78 2oln_A NIKD protein; flavoprot 97.1 0.011 3.6E-07 59.0 15.5 65 23-88 148-215 (397)
79 4dgk_A Phytoene dehydrogenase; 97.1 0.015 5.3E-07 59.7 17.0 60 29-88 222-284 (501)
80 3i6d_A Protoporphyrinogen oxid 96.9 0.029 1E-06 56.9 17.4 56 29-84 236-291 (470)
81 2ywl_A Thioredoxin reductase r 96.3 0.0035 1.2E-07 54.9 4.8 62 25-88 53-116 (180)
82 3axb_A Putative oxidoreductase 96.1 0.057 1.9E-06 54.6 13.6 66 22-88 175-261 (448)
83 2cul_A Glucose-inhibited divis 96.1 0.009 3.1E-07 54.8 6.8 62 26-88 66-131 (232)
84 3v76_A Flavoprotein; structura 96.1 0.0073 2.5E-07 60.7 6.6 57 25-82 129-187 (417)
85 3kkj_A Amine oxidase, flavin-c 96.0 0.0046 1.6E-07 57.3 4.2 37 199-241 293-329 (336)
86 2i0z_A NAD(FAD)-utilizing dehy 95.9 0.013 4.6E-07 59.4 7.7 56 27-82 133-191 (447)
87 3nlc_A Uncharacterized protein 95.5 0.02 6.8E-07 59.6 7.2 58 26-83 218-278 (549)
88 3dje_A Fructosyl amine: oxygen 95.4 0.027 9.2E-07 56.8 7.6 61 23-83 156-222 (438)
89 3ka7_A Oxidoreductase; structu 95.4 0.21 7.3E-06 49.7 14.2 57 28-85 196-255 (425)
90 2gv8_A Monooxygenase; FMO, FAD 95.3 0.026 8.8E-07 57.3 7.1 62 24-85 111-180 (447)
91 1rp0_A ARA6, thiazole biosynth 95.2 0.056 1.9E-06 51.1 8.8 63 26-88 117-197 (284)
92 3lov_A Protoporphyrinogen oxid 95.2 0.21 7.1E-06 50.7 13.7 54 29-83 237-290 (475)
93 3c4n_A Uncharacterized protein 95.2 0.0073 2.5E-07 60.5 2.6 66 22-88 166-244 (405)
94 3ab1_A Ferredoxin--NADP reduct 95.1 0.046 1.6E-06 53.4 8.0 64 25-88 71-137 (360)
95 3da1_A Glycerol-3-phosphate de 95.1 0.17 5.8E-06 52.8 12.6 65 24-88 166-239 (561)
96 3nrn_A Uncharacterized protein 95.0 0.22 7.4E-06 49.8 12.7 55 28-84 189-245 (421)
97 2uzz_A N-methyl-L-tryptophan o 94.8 0.057 2E-06 52.9 7.8 61 22-83 143-205 (372)
98 2zbw_A Thioredoxin reductase; 94.6 0.074 2.5E-06 51.2 7.9 64 25-88 62-127 (335)
99 4a9w_A Monooxygenase; baeyer-v 94.4 0.05 1.7E-06 52.7 6.2 59 25-84 73-134 (357)
100 3gwf_A Cyclohexanone monooxyge 94.3 0.074 2.5E-06 55.3 7.4 62 24-85 83-150 (540)
101 2q0l_A TRXR, thioredoxin reduc 94.1 0.082 2.8E-06 50.3 6.9 61 24-85 55-117 (311)
102 2gqf_A Hypothetical protein HI 94.1 0.057 1.9E-06 53.9 5.9 57 26-83 107-169 (401)
103 1w4x_A Phenylacetone monooxyge 94.0 0.074 2.5E-06 55.4 6.8 61 25-85 91-157 (542)
104 3ces_A MNMG, tRNA uridine 5-ca 93.8 0.11 3.9E-06 54.7 7.6 66 22-88 118-187 (651)
105 1qo8_A Flavocytochrome C3 fuma 93.4 0.14 4.7E-06 53.6 7.7 64 25-88 247-318 (566)
106 3cp8_A TRNA uridine 5-carboxym 93.4 0.21 7.3E-06 52.5 8.9 65 21-86 110-178 (641)
107 3jsk_A Cypbp37 protein; octame 93.2 0.19 6.5E-06 48.7 7.7 65 24-88 156-257 (344)
108 2zxi_A TRNA uridine 5-carboxym 92.7 0.21 7.3E-06 52.4 7.6 65 22-87 117-185 (637)
109 2v3a_A Rubredoxin reductase; a 92.5 0.17 5.9E-06 49.9 6.5 57 29-85 188-246 (384)
110 1vdc_A NTR, NADPH dependent th 92.2 0.15 5.3E-06 48.9 5.5 58 25-84 67-126 (333)
111 4ap3_A Steroid monooxygenase; 92.1 0.18 6.2E-06 52.5 6.3 61 25-85 96-162 (549)
112 1sez_A Protoporphyrinogen oxid 91.6 3.4 0.00012 42.0 15.3 57 28-84 243-310 (504)
113 1y0p_A Fumarate reductase flav 91.6 0.29 1E-05 51.1 7.3 62 27-88 254-323 (571)
114 2yqu_A 2-oxoglutarate dehydrog 91.6 0.21 7.2E-06 50.6 5.9 57 29-85 209-267 (455)
115 3qj4_A Renalase; FAD/NAD(P)-bi 91.1 0.32 1.1E-05 46.9 6.5 51 29-80 113-163 (342)
116 1fl2_A Alkyl hydroperoxide red 91.0 0.31 1.1E-05 46.1 6.3 60 25-84 53-117 (310)
117 2xve_A Flavin-containing monoo 91.0 0.29 9.9E-06 49.7 6.3 63 24-86 97-170 (464)
118 3uox_A Otemo; baeyer-villiger 90.6 0.31 1E-05 50.7 6.1 61 25-85 84-150 (545)
119 3fbs_A Oxidoreductase; structu 90.3 0.56 1.9E-05 43.8 7.3 61 24-85 52-115 (297)
120 1pj5_A N,N-dimethylglycine oxi 90.3 0.4 1.4E-05 52.5 7.1 63 22-85 145-210 (830)
121 1rsg_A FMS1 protein; FAD bindi 90.1 0.48 1.6E-05 48.7 7.1 57 27-83 201-258 (516)
122 3lzw_A Ferredoxin--NADP reduct 90.0 0.7 2.4E-05 43.9 7.8 58 25-83 64-124 (332)
123 1b37_A Protein (polyamine oxid 89.8 0.58 2E-05 47.4 7.4 55 29-83 207-271 (472)
124 3k7m_X 6-hydroxy-L-nicotine ox 89.7 0.48 1.6E-05 47.3 6.6 51 29-81 208-258 (431)
125 1kf6_A Fumarate reductase flav 89.5 0.6 2.1E-05 49.1 7.4 61 28-88 134-203 (602)
126 1ges_A Glutathione reductase; 88.9 0.43 1.5E-05 48.2 5.5 57 29-85 209-268 (450)
127 1d4d_A Flavocytochrome C fumar 88.8 0.73 2.5E-05 48.1 7.4 62 27-88 254-323 (572)
128 3cty_A Thioredoxin reductase; 88.8 0.65 2.2E-05 44.1 6.5 58 25-84 69-128 (319)
129 3o0h_A Glutathione reductase; 88.5 0.45 1.5E-05 48.5 5.4 56 30-85 234-291 (484)
130 2r9z_A Glutathione amide reduc 88.3 0.88 3E-05 46.0 7.4 55 30-84 209-266 (463)
131 2jae_A L-amino acid oxidase; o 88.1 0.74 2.5E-05 46.8 6.8 53 29-81 240-295 (489)
132 1s3e_A Amine oxidase [flavin-c 87.9 0.72 2.5E-05 47.4 6.6 54 29-83 216-269 (520)
133 2eq6_A Pyruvate dehydrogenase 87.8 0.93 3.2E-05 45.9 7.3 57 29-85 211-274 (464)
134 2q7v_A Thioredoxin reductase; 87.8 0.48 1.7E-05 45.2 4.9 58 25-83 62-124 (325)
135 2a87_A TRXR, TR, thioredoxin r 87.4 0.51 1.7E-05 45.3 4.8 58 25-84 68-128 (335)
136 1c0p_A D-amino acid oxidase; a 87.2 0.71 2.4E-05 44.8 5.7 49 22-83 136-186 (363)
137 1trb_A Thioredoxin reductase; 87.0 1 3.4E-05 42.7 6.6 58 25-84 59-118 (320)
138 3d1c_A Flavin-containing putat 86.9 0.88 3E-05 44.1 6.3 58 25-83 85-144 (369)
139 1m6i_A Programmed cell death p 86.4 1 3.5E-05 46.0 6.6 56 29-84 227-284 (493)
140 3s5w_A L-ornithine 5-monooxyge 86.2 1 3.5E-05 45.4 6.5 58 25-82 124-192 (463)
141 2rgh_A Alpha-glycerophosphate 85.9 7.5 0.00026 40.3 13.1 64 25-88 185-257 (571)
142 2vvm_A Monoamine oxidase N; FA 85.8 1.2 4.1E-05 45.3 6.9 55 29-83 256-313 (495)
143 1hyu_A AHPF, alkyl hydroperoxi 85.6 0.97 3.3E-05 46.5 6.0 59 25-83 264-327 (521)
144 1xdi_A RV3303C-LPDA; reductase 85.3 1.3 4.6E-05 45.1 6.9 56 29-84 224-281 (499)
145 2gjc_A Thiazole biosynthetic e 85.2 2.5 8.7E-05 40.4 8.3 65 24-88 142-245 (326)
146 3f8d_A Thioredoxin reductase ( 85.2 1.4 4.9E-05 41.5 6.6 58 25-83 67-126 (323)
147 3iwa_A FAD-dependent pyridine 85.1 1.3 4.5E-05 44.8 6.7 56 29-84 203-260 (472)
148 3fg2_P Putative rubredoxin red 85.0 1.6 5.5E-05 43.1 7.1 55 29-83 185-242 (404)
149 3itj_A Thioredoxin reductase 1 84.0 1.1 3.8E-05 42.6 5.3 59 25-84 81-144 (338)
150 3lxd_A FAD-dependent pyridine 83.7 1.9 6.6E-05 42.7 7.1 56 29-84 195-253 (415)
151 1mo9_A ORF3; nucleotide bindin 82.6 1.6 5.5E-05 44.9 6.2 57 29-85 256-319 (523)
152 2hqm_A GR, grase, glutathione 82.1 1.4 4.7E-05 44.8 5.3 56 29-84 227-287 (479)
153 4gut_A Lysine-specific histone 81.7 1.7 5.7E-05 47.1 6.0 42 40-81 543-584 (776)
154 3ef6_A Toluene 1,2-dioxygenase 81.6 1.1 3.9E-05 44.4 4.4 55 30-84 187-243 (410)
155 1fec_A Trypanothione reductase 81.4 2.2 7.5E-05 43.5 6.6 56 29-84 232-290 (490)
156 2wpf_A Trypanothione reductase 81.3 2.4 8.1E-05 43.2 6.8 56 29-84 236-294 (495)
157 1ojt_A Surface protein; redox- 80.6 1.8 6.1E-05 44.0 5.6 56 29-84 227-288 (482)
158 2qae_A Lipoamide, dihydrolipoy 80.5 1.7 5.7E-05 44.0 5.3 55 30-84 217-278 (468)
159 1ebd_A E3BD, dihydrolipoamide 80.5 2.3 7.8E-05 42.8 6.3 56 29-84 212-272 (455)
160 1onf_A GR, grase, glutathione 79.7 3.9 0.00013 41.7 7.8 56 29-84 218-277 (500)
161 3g3e_A D-amino-acid oxidase; F 79.3 3.5 0.00012 39.6 7.0 50 22-83 136-187 (351)
162 2iid_A L-amino-acid oxidase; f 79.3 2.8 9.7E-05 42.5 6.6 52 29-81 242-297 (498)
163 1q1r_A Putidaredoxin reductase 79.1 2 6.8E-05 42.9 5.3 55 30-84 193-252 (431)
164 2e5v_A L-aspartate oxidase; ar 78.9 1.6 5.6E-05 44.2 4.6 61 27-88 118-182 (472)
165 2yg5_A Putrescine oxidase; oxi 78.5 2.8 9.6E-05 41.9 6.2 56 29-87 216-272 (453)
166 2ivd_A PPO, PPOX, protoporphyr 77.8 1.9 6.4E-05 43.5 4.7 54 29-83 239-295 (478)
167 3p1w_A Rabgdi protein; GDI RAB 77.6 2.2 7.6E-05 43.2 5.1 53 29-81 257-313 (475)
168 2h88_A Succinate dehydrogenase 77.5 6.4 0.00022 41.3 8.7 57 28-84 155-219 (621)
169 4at0_A 3-ketosteroid-delta4-5a 77.1 4.9 0.00017 41.0 7.6 58 29-86 203-268 (510)
170 3oc4_A Oxidoreductase, pyridin 76.6 3.8 0.00013 41.0 6.6 55 29-84 190-246 (452)
171 2z3y_A Lysine-specific histone 75.0 3.8 0.00013 43.5 6.3 49 29-80 402-456 (662)
172 1chu_A Protein (L-aspartate ox 74.7 2.3 7.8E-05 44.0 4.3 57 29-85 139-211 (540)
173 1v59_A Dihydrolipoamide dehydr 74.5 4.1 0.00014 41.2 6.1 57 29-85 225-290 (478)
174 1dxl_A Dihydrolipoamide dehydr 74.5 3.5 0.00012 41.5 5.6 56 29-84 219-281 (470)
175 2a8x_A Dihydrolipoyl dehydroge 74.3 3.4 0.00012 41.5 5.5 43 40-85 105-149 (464)
176 2a8x_A Dihydrolipoyl dehydroge 74.2 3.5 0.00012 41.5 5.5 55 30-84 214-273 (464)
177 1d5t_A Guanine nucleotide diss 73.6 2.1 7.3E-05 42.8 3.7 55 29-83 235-291 (433)
178 3ntd_A FAD-dependent pyridine 73.4 5.7 0.00019 41.0 7.0 56 29-84 193-269 (565)
179 3ic9_A Dihydrolipoamide dehydr 73.1 6.7 0.00023 39.8 7.4 56 29-84 216-276 (492)
180 1zmd_A Dihydrolipoyl dehydroge 72.8 4.9 0.00017 40.5 6.3 56 29-84 221-284 (474)
181 3urh_A Dihydrolipoyl dehydroge 72.2 7 0.00024 39.6 7.3 56 29-84 240-302 (491)
182 2wdq_A Succinate dehydrogenase 71.7 9.8 0.00034 39.6 8.4 57 28-84 143-208 (588)
183 3l8k_A Dihydrolipoyl dehydroge 71.3 5.1 0.00018 40.3 6.0 56 29-85 215-275 (466)
184 2b9w_A Putative aminooxidase; 71.1 5.7 0.00019 39.2 6.2 53 29-83 207-259 (424)
185 2xag_A Lysine-specific histone 70.8 5 0.00017 43.8 6.0 49 29-80 573-627 (852)
186 2cdu_A NADPH oxidase; flavoenz 70.6 8 0.00027 38.6 7.2 56 29-84 192-249 (452)
187 3s5w_A L-ornithine 5-monooxyge 70.3 12 0.0004 37.4 8.4 43 40-82 330-377 (463)
188 4dna_A Probable glutathione re 69.7 6.1 0.00021 39.7 6.1 55 29-84 212-270 (463)
189 3lad_A Dihydrolipoamide dehydr 69.0 7.3 0.00025 39.2 6.6 55 30-84 223-282 (476)
190 1zk7_A HGII, reductase, mercur 67.6 9.9 0.00034 38.1 7.2 56 29-85 217-274 (467)
191 2gqw_A Ferredoxin reductase; f 66.7 8.2 0.00028 38.0 6.2 51 30-84 189-241 (408)
192 1trb_A Thioredoxin reductase; 66.7 7.5 0.00026 36.4 5.8 55 29-83 185-248 (320)
193 1q1r_A Putidaredoxin reductase 66.6 4.3 0.00015 40.4 4.2 43 40-84 74-116 (431)
194 1dxl_A Dihydrolipoamide dehydr 64.0 5.1 0.00017 40.3 4.2 43 41-86 111-155 (470)
195 3d1c_A Flavin-containing putat 62.5 10 0.00035 36.3 5.9 43 41-83 230-273 (369)
196 1nhp_A NADH peroxidase; oxidor 61.2 6.8 0.00023 39.1 4.5 54 29-84 192-248 (447)
197 2bs2_A Quinol-fumarate reducta 61.1 14 0.00049 39.0 7.1 56 29-84 159-222 (660)
198 2bcg_G Secretory pathway GDP d 60.9 6.4 0.00022 39.4 4.2 54 29-83 243-301 (453)
199 3nks_A Protoporphyrinogen oxid 59.0 8.8 0.0003 38.4 4.9 54 29-83 235-291 (477)
200 4gde_A UDP-galactopyranose mut 58.4 12 0.0004 37.9 5.7 52 28-81 222-275 (513)
201 4dsg_A UDP-galactopyranose mut 58.1 12 0.00041 37.8 5.7 57 27-85 215-273 (484)
202 3dgh_A TRXR-1, thioredoxin red 56.7 19 0.00066 36.2 7.0 54 29-82 228-289 (483)
203 1ojt_A Surface protein; redox- 56.7 11 0.00038 38.0 5.2 43 40-85 109-163 (482)
204 1lvl_A Dihydrolipoamide dehydr 55.2 6.8 0.00023 39.3 3.2 54 29-84 213-270 (458)
205 3cgb_A Pyridine nucleotide-dis 55.1 11 0.00039 37.9 4.9 44 40-83 107-153 (480)
206 3vrd_B FCCB subunit, flavocyto 54.5 7.5 0.00026 38.0 3.4 40 41-80 217-256 (401)
207 3h8l_A NADH oxidase; membrane 54.5 9.5 0.00032 37.4 4.1 49 29-81 219-269 (409)
208 4b1b_A TRXR, thioredoxin reduc 54.4 25 0.00085 36.1 7.4 47 40-86 277-323 (542)
209 4b63_A L-ornithine N5 monooxyg 54.3 18 0.00061 36.7 6.3 57 24-80 141-212 (501)
210 2zbw_A Thioredoxin reductase; 53.6 19 0.00066 33.7 6.1 55 29-83 192-253 (335)
211 3ics_A Coenzyme A-disulfide re 53.4 16 0.00053 37.9 5.8 54 29-84 229-284 (588)
212 1v59_A Dihydrolipoamide dehydr 52.8 14 0.00047 37.1 5.2 40 40-82 110-157 (478)
213 3itj_A Thioredoxin reductase 1 52.7 22 0.00076 33.2 6.4 53 29-82 213-271 (338)
214 1jnr_A Adenylylsulfate reducta 52.2 19 0.00064 37.9 6.2 56 29-84 152-220 (643)
215 3klj_A NAD(FAD)-dependent dehy 51.7 12 0.00043 36.4 4.5 39 40-80 76-114 (385)
216 2bc0_A NADH oxidase; flavoprot 51.4 14 0.00048 37.3 4.9 54 29-84 237-293 (490)
217 1y56_A Hypothetical protein PH 50.5 12 0.00041 37.9 4.3 43 41-83 272-314 (493)
218 3ab1_A Ferredoxin--NADP reduct 49.3 24 0.00082 33.6 6.1 44 40-83 216-264 (360)
219 3dk9_A Grase, GR, glutathione 49.0 31 0.0011 34.5 7.0 55 29-83 229-294 (478)
220 2gqw_A Ferredoxin reductase; f 47.0 16 0.00054 35.9 4.4 41 41-83 74-114 (408)
221 3cgb_A Pyridine nucleotide-dis 46.7 30 0.001 34.7 6.5 54 29-84 228-284 (480)
222 2q0l_A TRXR, thioredoxin reduc 46.3 49 0.0017 30.4 7.6 43 40-82 193-241 (311)
223 1vg0_A RAB proteins geranylger 46.2 35 0.0012 35.8 7.0 50 28-77 378-432 (650)
224 1ebd_A E3BD, dihydrolipoamide 44.9 21 0.00071 35.6 4.9 42 40-84 105-147 (455)
225 3f8d_A Thioredoxin reductase ( 43.8 32 0.0011 31.8 5.9 43 40-82 204-251 (323)
226 3kd9_A Coenzyme A disulfide re 40.5 31 0.0011 34.1 5.5 53 29-82 191-244 (449)
227 3fpz_A Thiazole biosynthetic e 39.8 10 0.00035 35.9 1.6 41 199-239 282-324 (326)
228 2q7v_A Thioredoxin reductase; 39.3 67 0.0023 29.7 7.4 43 40-82 202-249 (325)
229 3ayj_A Pro-enzyme of L-phenyla 38.5 15 0.00052 39.1 2.8 50 29-78 348-410 (721)
230 2bc0_A NADH oxidase; flavoprot 37.8 19 0.00066 36.3 3.4 43 40-83 106-150 (490)
231 3r9u_A Thioredoxin reductase; 37.5 81 0.0028 28.8 7.6 55 25-81 59-117 (315)
232 3dgz_A Thioredoxin reductase 2 37.4 59 0.002 32.6 7.0 55 29-83 226-288 (488)
233 3r9u_A Thioredoxin reductase; 36.8 39 0.0013 31.0 5.2 42 40-81 197-243 (315)
234 1xhc_A NADH oxidase /nitrite r 36.1 21 0.00071 34.4 3.2 51 29-84 184-236 (367)
235 1fl2_A Alkyl hydroperoxide red 36.1 69 0.0024 29.3 6.9 53 29-82 184-242 (310)
236 1m6i_A Programmed cell death p 36.0 28 0.00095 35.1 4.3 40 41-82 105-144 (493)
237 4fk1_A Putative thioredoxin re 35.8 82 0.0028 28.9 7.3 56 26-81 58-116 (304)
238 3hyw_A Sulfide-quinone reducta 35.7 33 0.0011 33.8 4.7 39 41-82 71-109 (430)
239 3lzw_A Ferredoxin--NADP reduct 35.3 30 0.001 32.2 4.1 43 40-82 203-250 (332)
240 3sx6_A Sulfide-quinone reducta 34.3 33 0.0011 33.9 4.4 41 41-84 74-114 (437)
241 3cty_A Thioredoxin reductase; 32.4 86 0.0029 28.9 6.9 43 40-82 204-252 (319)
242 3fbs_A Oxidoreductase; structu 31.7 68 0.0023 29.0 6.0 38 40-81 188-225 (297)
243 1zmd_A Dihydrolipoyl dehydroge 31.4 68 0.0023 31.9 6.3 43 40-85 111-155 (474)
244 3ef6_A Toluene 1,2-dioxygenase 28.8 47 0.0016 32.4 4.5 40 40-81 71-110 (410)
245 2cdu_A NADPH oxidase; flavoenz 28.7 41 0.0014 33.3 4.0 44 40-83 72-118 (452)
246 2cu3_A Unknown function protei 28.6 21 0.00072 24.6 1.3 12 458-469 46-57 (64)
247 4g6h_A Rotenone-insensitive NA 28.0 38 0.0013 34.3 3.7 42 40-81 286-331 (502)
248 1nhp_A NADH peroxidase; oxidor 28.0 55 0.0019 32.3 4.8 43 40-82 70-115 (447)
249 1wv3_A Similar to DNA segregat 27.6 72 0.0024 28.6 5.1 34 391-432 20-54 (238)
250 1vdc_A NTR, NADPH dependent th 26.5 76 0.0026 29.4 5.4 44 40-83 209-260 (333)
251 3h28_A Sulfide-quinone reducta 26.1 66 0.0023 31.5 5.0 40 40-81 214-255 (430)
252 2k9x_A Tburm1, uncharacterized 25.9 30 0.001 27.0 1.9 26 441-469 70-95 (110)
253 2co3_A SAFA pilus subunit; adh 25.6 38 0.0013 27.0 2.4 37 409-445 80-116 (137)
254 3h28_A Sulfide-quinone reducta 25.6 57 0.002 32.0 4.4 40 41-83 71-110 (430)
255 3rpf_C Molybdopterin convertin 24.5 46 0.0016 23.5 2.6 23 441-469 45-67 (74)
256 3mml_A Allophanate hydrolase s 24.5 1E+02 0.0034 29.0 5.5 32 436-472 78-109 (318)
257 2k5p_A THis protein, thiamine- 24.1 25 0.00086 25.5 1.0 26 441-471 37-64 (78)
258 2q5w_D Molybdopterin convertin 24.0 44 0.0015 23.7 2.4 22 441-469 49-70 (77)
259 2l52_A Methanosarcina acetivor 24.0 35 0.0012 25.9 1.9 27 439-470 65-93 (99)
260 3gwf_A Cyclohexanone monooxyge 23.7 57 0.002 33.3 4.1 34 46-83 352-385 (540)
261 3nk4_C ZONA pellucida 3; ferti 23.5 38 0.0013 18.6 1.4 12 65-76 6-17 (30)
262 4eqs_A Coenzyme A disulfide re 23.5 1.2E+02 0.0041 29.7 6.4 39 40-82 202-240 (437)
263 1ryj_A Unknown; beta/alpha pro 22.6 48 0.0017 23.2 2.3 22 441-469 42-63 (70)
264 3lxd_A FAD-dependent pyridine 22.6 73 0.0025 30.9 4.5 40 40-81 79-118 (415)
265 1wgk_A Riken cDNA 2900073H19 p 22.4 33 0.0011 26.9 1.5 26 441-469 76-101 (114)
266 2kl0_A Putative thiamin biosyn 22.3 22 0.00074 25.5 0.4 25 441-470 33-59 (73)
267 3gyx_A Adenylylsulfate reducta 22.3 98 0.0033 32.5 5.6 58 27-84 165-235 (662)
268 1ps9_A 2,4-dienoyl-COA reducta 22.0 1.3E+02 0.0045 31.5 6.6 40 40-82 587-628 (671)
269 2g1e_A Hypothetical protein TA 21.3 49 0.0017 24.2 2.3 24 441-469 58-83 (90)
270 1xhc_A NADH oxidase /nitrite r 21.2 66 0.0023 30.8 3.8 38 41-81 75-112 (367)
271 3oc4_A Oxidoreductase, pyridin 21.2 81 0.0028 31.1 4.5 42 41-82 73-115 (452)
272 4a5l_A Thioredoxin reductase; 20.9 1.2E+02 0.0042 27.6 5.5 57 25-82 63-121 (314)
273 2hj1_A Hypothetical protein; s 20.6 50 0.0017 25.1 2.1 28 438-472 58-85 (97)
274 2l8d_A Lamin-B receptor; DNA b 20.5 95 0.0033 21.5 3.2 29 40-68 22-50 (66)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=3.2e-33 Score=285.51 Aligned_cols=269 Identities=29% Similarity=0.407 Sum_probs=215.6
Q ss_pred CeEEEeeHHHHHHHHHhccCCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchhhccccCC-CCCcccc
Q 010723 20 PVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVRKNLFGP-QEAIYSG 98 (502)
Q Consensus 20 p~~~~i~R~~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR~~l~~~-~~~~~~~ 98 (502)
+.++.++|..|++.|.+.+..+.++++++|++++.++++++|++.+|++++||+||+|||.+|.||+.+.+. ....|.+
T Consensus 119 ~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~ 198 (407)
T 3rp8_A 119 SRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSALRPWVLGFTPQRRYAG 198 (407)
T ss_dssp SCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTCSSHHHHHSSCCCCEEEE
T ss_pred CceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcChHHHHHhcCCCCCCcccC
Confidence 457899999999999999876779999999999999999999999999999999999999999999999443 3566777
Q ss_pred eEEEEEEecCCCCCccccceEEEecCceEEEEEeCCCCeEEEEEEEcCCCCCCCCCcchHHHHHHHhhCCChHHHHHHHc
Q 010723 99 YTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILA 178 (502)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 178 (502)
..++.+.+...........+..+++++.+++++|.+++...|++....+......+....+.+.+.+..|.+.+.+++..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 278 (407)
T 3rp8_A 199 YVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPAGLAEDRDTLRADLSRYFAGWAPPVQKLIAA 278 (407)
T ss_dssp EEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTCSCCTTTHHHHHHHHTTTCCHHHHHHHHH
T ss_pred cEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCcCCCCCchhHHHHHHHHhcCCChHHHHHHHc
Confidence 77777765432222334456677788888999999999988887766544333334466788899999999999888877
Q ss_pred CCccceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCCChhhHHHHHHHH
Q 010723 179 TDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSY 258 (502)
Q Consensus 179 ~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y 258 (502)
........+.++......+|+.+||+|||||||.++|++|||+|+||+||..|+++|... . +...+|+.|
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~---------~-~~~~~l~~Y 348 (407)
T 3rp8_A 279 LDPQTTNRIEIHDIEPFSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQT---------R-DIAAALREY 348 (407)
T ss_dssp SCGGGCEEEEEEECCCCSCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSC---------C-CHHHHHHHH
T ss_pred CCccceeEEeeEecCCCCceecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcC---------C-CHHHHHHHH
Confidence 766554445555555558999999999999999999999999999999999999999853 1 568999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCccchhhhcccCCC
Q 010723 259 ERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHP 305 (502)
Q Consensus 259 ~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~ 305 (502)
+++|++++..++..++.+..+ +....+....+|+..|...
T Consensus 349 ~~~r~~~~~~~~~~s~~~~~~-------~~~~~~~~~~~R~~~l~~~ 388 (407)
T 3rp8_A 349 EAQRCDRVRDLVLKARKRCDI-------THGKDMQLTEAWYQELREE 388 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-------HTTTTHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHhhhh-------hhcCCHHHHHHHHHHHhhc
Confidence 999999999998888775544 3334455677888777544
No 2
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=2.3e-32 Score=279.06 Aligned_cols=250 Identities=24% Similarity=0.357 Sum_probs=180.7
Q ss_pred EEEeeHHHHHHHHHhccCCCeEecCCeEEEEEeeCC-eEEEEEccCcEEEeeEEEEecCCCchhhccccCCCCCcccceE
Q 010723 22 TRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQCYAGDLLIGADGIWSKVRKNLFGPQEAIYSGYT 100 (502)
Q Consensus 22 ~~~i~R~~L~~~L~~~~~~~~v~~~~~v~~i~~~~~-~v~v~~~dg~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~ 100 (502)
.+.|+|..|+++|.+.++. .++++++|+++++.++ +|+|+++||++++||+||||||++|.||+++.+.....+.+..
T Consensus 106 ~~~i~R~~L~~~L~~~~~~-~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~ 184 (412)
T 4hb9_A 106 RLSISRTELKEILNKGLAN-TIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNSKVRKQYLPFIERFDVGVS 184 (412)
T ss_dssp EEEEEHHHHHHHHHTTCTT-TEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTCHHHHHHSTTCCCEEEEEE
T ss_pred ceEeeHHHHHHHHHhhccc-eEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCcchHHHhCCCcccccccee
Confidence 5789999999999998865 4899999999987654 6999999999999999999999999999999766666666666
Q ss_pred EEEEEecCCCC-------CccccceEEEec--CceEEEE---EeC--------CC--CeEEEEEEEcCCCCCCC----CC
Q 010723 101 CYTGIADFVPA-------DIESVGYRVFLG--HKQYFVS---SDV--------GA--GKMQWYAFHKEPAGGVD----GP 154 (502)
Q Consensus 101 ~~~~~~~~~~~-------~~~~~~~~~~~~--~~~~~~~---~p~--------~~--~~~~~~~~~~~~~~~~~----~~ 154 (502)
++.+.....+. ............ ++..++. .|. .. ....|............ ..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (412)
T 4hb9_A 185 MIIGRARLTPALTALLPQNFRDGTPNSIVPKSPDWLFISMWRAPVNIHVEASLAEIDNFIVWVYVAATDSLPDNITDFSA 264 (412)
T ss_dssp EEEEEEECCHHHHHHSCGGGTSSCCEEECCSSSEEEEEEEEEEESCTTSCGGGCCEEEEEEEEEEEEGGGSCTTGGGCCH
T ss_pred EEEEEEecchhhhcchhhhhccCCcceEeecCCCcceeeeeecCCceeEEEeccCCCceEEEEEecccccccccccccch
Confidence 66665433211 111111111111 1111111 111 11 11233332221111111 12
Q ss_pred cchHHHHHHHhhCCChHHHHHHHcCCccceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHH
Q 010723 155 EGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVE 234 (502)
Q Consensus 155 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~ 234 (502)
+...+.+.+.+..|.|.+.+++...+...+..+.+....+..+|..|||+|||||||+|+|++|||+|+||+||.+|+++
T Consensus 265 ~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~ 344 (412)
T 4hb9_A 265 EALCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRSMPHLLPWKSSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQK 344 (412)
T ss_dssp HHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEECCCCCCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCChHHHHHHHhcccceeccchhccccccccccccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHH
Confidence 23455677788899999999998877666666666666667789999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 010723 235 LEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAV 278 (502)
Q Consensus 235 L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~ 278 (502)
|..+..+. .+++.+|+.||++|++++..++..|+....
T Consensus 345 L~~~~~~~------~~~~~aL~~Ye~~R~~~~~~~~~~s~~~~~ 382 (412)
T 4hb9_A 345 LASVASGH------EELVKAISDYEQQMRAYANEIVGISLRSAQ 382 (412)
T ss_dssp HHHHHTTS------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCC------cCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987652 466889999999999999999998876543
No 3
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.97 E-value=4.4e-29 Score=254.01 Aligned_cols=241 Identities=20% Similarity=0.235 Sum_probs=178.8
Q ss_pred EeeHHHHHHHHHhccCCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchhhccccCCCCCcccceEEEE
Q 010723 24 VISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVRKNLFGPQEAIYSGYTCYT 103 (502)
Q Consensus 24 ~i~R~~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~ 103 (502)
.+.|..|.+.|.+.+..+.++++++|++++.++++++|++.+|++++||+||+|||.+|.||+.+. ...+.|.++.+|.
T Consensus 95 ~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vr~~~~-~~~~~~~~~~~~~ 173 (397)
T 2vou_A 95 FTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASVVRKRLL-GIEPTYAGYVTWR 173 (397)
T ss_dssp EEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCHHHHHHH-CCCCEEEEEEEEE
T ss_pred ccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchhHHHHhc-cCCCCccceEEEE
Confidence 478899999999988777899999999999998999999999999999999999999999999987 5567787777887
Q ss_pred EEecCCCCCcc-----ccceEEEecCceEEEEEeCCCC------eEEEEEEEcCCCCC------CC--------------
Q 010723 104 GIADFVPADIE-----SVGYRVFLGHKQYFVSSDVGAG------KMQWYAFHKEPAGG------VD-------------- 152 (502)
Q Consensus 104 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~~------~~~~~~~~~~~~~~------~~-------------- 152 (502)
+.+.....+.. ...+.++.+++..++.+|++++ .+.|+++.+.+... ..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (397)
T 2vou_A 174 GVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNS 253 (397)
T ss_dssp EEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGG
T ss_pred EEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEEEEEEecCCCccchhhhccCCCCcccccccCccc
Confidence 77653221111 1234556677777777777643 55565554432210 00
Q ss_pred CCcchHHHHHHHh-hCCChHHHHHHHcCCccceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHH
Q 010723 153 GPEGKKERLLKIF-EGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQL 231 (502)
Q Consensus 153 ~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~L 231 (502)
......+++.+.+ ..|.+ +.+++..... ...+++... ..++|+.|||+|||||||.|+|++|||+|+||+||..|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~-~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~L 329 (397)
T 2vou_A 254 LNPHNLRQFHSKGESLFKP-FRDLVLNASS--PFVTVVADA-TVDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTL 329 (397)
T ss_dssp CCHHHHHHHHHHHTTSCHH-HHHHHHHCSS--CEEEEEEEB-CCSCSEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhChH-HHHHHhccCC--cceeeeeee-cCCceecCcEEEEeccccccCCcchhhHHHHHHHHHHH
Confidence 0122334444444 35666 7776655432 223455543 45789999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCCCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 010723 232 AVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVM 279 (502)
Q Consensus 232 a~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~ 279 (502)
+++|... .+...+|+.|+++|++++..++..++....+
T Consensus 330 a~~L~~~----------~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~ 367 (397)
T 2vou_A 330 AEVFTKN----------HDLRGSLQSWETRQLQQGHAYLNKVKKMASR 367 (397)
T ss_dssp HHHHHHC----------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999751 3457999999999999999999888775544
No 4
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.97 E-value=2.8e-29 Score=255.56 Aligned_cols=241 Identities=21% Similarity=0.228 Sum_probs=179.9
Q ss_pred EEeeHHHHHHHHHhccCCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchhhccccCCCCCcccceEEE
Q 010723 23 RVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVRKNLFGPQEAIYSGYTCY 102 (502)
Q Consensus 23 ~~i~R~~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~ 102 (502)
..++|..|.+.|.+.+....++++++|++++.++++++|++.+|++++||+||+|||.+|.||+.+. ...+.|.+..++
T Consensus 123 ~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vR~~l~-~~~~~~~g~~~~ 201 (398)
T 2xdo_A 123 PEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSKVRKFVT-DTEVEETGTFNI 201 (398)
T ss_dssp CEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCSCCTTTC-CCCCEEEEEEEE
T ss_pred ceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchhHHhhcc-CCCceEcceEEE
Confidence 3689999999999998766789999999999988889999999999999999999999999999874 345667666666
Q ss_pred EEEecCCCC---Cc---cccceEEEecCceEEEEEeCCCCeEEEEEEEcCCCCCC-------CCCcchHHHHHHHhhCCC
Q 010723 103 TGIADFVPA---DI---ESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGV-------DGPEGKKERLLKIFEGWC 169 (502)
Q Consensus 103 ~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~~ 169 (502)
.+.+..... .. ......++++++..++.+|.+++.+.|++....+.... ..++...+.+.+.|..|.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 281 (398)
T 2xdo_A 202 QADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFSDWD 281 (398)
T ss_dssp EEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTTTSC
T ss_pred EEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEEEEEecCcccccccccCcCCHHHHHHHHHHHHcCCC
Confidence 655432110 00 01223344566677777788888877776554332211 112334556777788898
Q ss_pred hHHHHHHHcCCccceeeeecccCCCCCcccC-C--CEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCC
Q 010723 170 DNVVDLILATDEEAILRRDIYDRTPIFTWGR-G--RVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESK 246 (502)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-g--rvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~ 246 (502)
+.+.+.+.... .+..++++......+|.. + ||+|+|||||+|+|++|||+|+||+||.+|+++|... .
T Consensus 282 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~--~----- 352 (398)
T 2xdo_A 282 ERYKELIHTTL--SFVGLATRIFPLEKPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADG--K----- 352 (398)
T ss_dssp HHHHHHHHHCS--CCEEEEEEECCCCSCCCSCCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSC--C-----
T ss_pred hHHHHHHhCcc--cceeeeeEeccCCCCcccCCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhc--c-----
Confidence 88888776532 234445555444457875 5 9999999999999999999999999999999999864 1
Q ss_pred Chhh-HHHHHHHHHHHhHHHHHHHHHHHHH
Q 010723 247 TPID-IVSALKSYERARRLRVAVIHGLARS 275 (502)
Q Consensus 247 ~~~~-~~~~L~~Y~~~R~~~~~~~~~~s~~ 275 (502)
.+ .+.+|+.|+++|++++..++..+..
T Consensus 353 --~~~~~~~L~~Y~~~r~~~~~~~~~~s~~ 380 (398)
T 2xdo_A 353 --FNSIEEAVKNYEQQMFIYGKEAQEESTQ 380 (398)
T ss_dssp --SSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23 5789999999999999988776654
No 5
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.97 E-value=2e-29 Score=263.28 Aligned_cols=245 Identities=18% Similarity=0.142 Sum_probs=169.1
Q ss_pred CCCeEEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCc---EEEeeEEEEecCCCchhhccc-cCC
Q 010723 18 GLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQ---CYAGDLLIGADGIWSKVRKNL-FGP 91 (502)
Q Consensus 18 ~~p~~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~---~~~adlvVgADG~~S~vR~~l-~~~ 91 (502)
..|.++.++|..|+++|.+.+. .+.++++++|+++++++++|+|++.+++ +++||+||||||.+|.||+.+ +..
T Consensus 97 ~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~ 176 (499)
T 2qa2_A 97 AHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAGFDF 176 (499)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCHHHHHTTCCC
T ss_pred CCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccHHHHHcCCCC
Confidence 4577899999999999999874 3679999999999999999999998875 899999999999999999998 333
Q ss_pred CCCcccceEEEEEEecCCCCCccccceEEEecCceEEEEEeCCCCeEEEEEEEcCCCCCCCCCcchHHHHHHHhhCCChH
Q 010723 92 QEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDN 171 (502)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 171 (502)
....+.. ..+.+.+... .. . ..+..+..++++++++|.+++.+.+++................+++.+.+..+.+.
T Consensus 177 ~~~~~~~-~~~~~~v~~~-~~-~-~~~~~~~~~~g~~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 252 (499)
T 2qa2_A 177 PGTSASR-EMFLADIRGC-EI-T-PRPIGETVPLGMVMSAPLGDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRLTGQ 252 (499)
T ss_dssp CEECCCC-CEEEEEEESC-CC-C-CEEEEEEETTEEEEEEECSSSCEEEEEEETTCCCCCCSSSCCHHHHHHHHHHHHSC
T ss_pred CCCCCcc-EEEEEEEEEC-CC-C-cceEEEECCCeEEEEEEcCCCEEEEEEEecCCCCccccCCCCHHHHHHHHHHHhCC
Confidence 3333332 2333333221 11 1 11344556677788889988876666554322111111122344454444322110
Q ss_pred HHHHHHcCCccce-eeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCCChhh
Q 010723 172 VVDLILATDEEAI-LRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPID 250 (502)
Q Consensus 172 ~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~~ 250 (502)
.+. .....+ ..+... .....+|..|||+|+|||||.|+|++|||+|+||+||.+|+|+|+.++++. .
T Consensus 253 ---~~~-~~~~~~~~~~~~~-~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~-------~ 320 (499)
T 2qa2_A 253 ---DIS-HGEPVWVSAFGDP-ARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGR-------A 320 (499)
T ss_dssp ---CCT-TCEEEEEEEECCC-EEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTS-------S
T ss_pred ---CCC-ccceeEEEEEeCC-cEEcccccCCCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcCC-------C
Confidence 000 011111 112221 134578999999999999999999999999999999999999999987642 2
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 010723 251 IVSALKSYERARRLRVAVIHGLARSAAV 278 (502)
Q Consensus 251 ~~~~L~~Y~~~R~~~~~~~~~~s~~~~~ 278 (502)
.+.+|++|+++|++++..++..++....
T Consensus 321 ~~~~L~~Ye~eR~~~~~~~~~~s~~~~~ 348 (499)
T 2qa2_A 321 PAGLLDTYHEERHPVGRRLLMNTQAQGM 348 (499)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999999999999887775443
No 6
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.96 E-value=1.2e-30 Score=276.24 Aligned_cols=284 Identities=17% Similarity=0.126 Sum_probs=190.3
Q ss_pred CCCeEEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEE--ccC-cEEEeeEEEEecCCCchhhccc-cCC
Q 010723 18 GLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVL--ENG-QCYAGDLLIGADGIWSKVRKNL-FGP 91 (502)
Q Consensus 18 ~~p~~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~--~dg-~~~~adlvVgADG~~S~vR~~l-~~~ 91 (502)
..+.++.++|..|++.|.+.+. .++++++++|+++++++++++|++ .+| ++++||+||+|||.+|.||+.+ +..
T Consensus 138 ~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lGi~~ 217 (570)
T 3fmw_A 138 RHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRSTVRRLAADRF 217 (570)
T ss_dssp SCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSCHHHHHTTCCC
T ss_pred CCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCchHHHHcCCCC
Confidence 3466889999999999999874 367899999999999999999888 678 7899999999999999999998 444
Q ss_pred CCCcccceEEEEEEecCCCCCccccceEEEecCceEEEE-EeCCCCeE-EEEEEEcCCCCCCCCCcchHHHHHHHhhCCC
Q 010723 92 QEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVS-SDVGAGKM-QWYAFHKEPAGGVDGPEGKKERLLKIFEGWC 169 (502)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 169 (502)
....|.. .++.+.+...... ..+.+...+.+++++ +|.+++.. .|++................+++.+.+..+.
T Consensus 218 ~~~~~~~-~~~~~~v~~~~~~---~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 293 (570)
T 3fmw_A 218 PGTEATV-RALIGYVTTPERE---VPRRWERTPDGILVLAFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLGAAVARVR 293 (570)
T ss_dssp CCCCCCE-EEEEEECCCCSCS---SCCCCCCCCSSCEEECCCC------CEEEEEESCC-----CCCCHHHHHHHTTSSS
T ss_pred ccceeee-EEEEEEEEecCCC---cceEEEecCCEEEEEEeecCCCeEEEEEEEeCCCCccccccCCCHHHHHHHHHHHh
Confidence 4455554 3444443321111 112222234444444 68877765 5555443222111112234567777776654
Q ss_pred hHHHHHHHcCCcc-ceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCCCh
Q 010723 170 DNVVDLILATDEE-AILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTP 248 (502)
Q Consensus 170 ~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~ 248 (502)
+.. +...... ....+++.. ....+|..|||+|+|||||.++|++|||+|+||+||.+|+++|..++++
T Consensus 294 ~~~---~~~~~~~~~~~~~~~~~-~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g------- 362 (570)
T 3fmw_A 294 GTP---LTLTEPVSWLSRFGDAS-RQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRG------- 362 (570)
T ss_dssp SCC---CCCCSCCEEEEEECCCC-EECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHS-------
T ss_pred hcc---cccceeeeeeEEeeccc-ccccccccCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcC-------
Confidence 321 1111111 122233322 3457899999999999999999999999999999999999999998764
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCccchhhhcccCCCCccc--ceeeeeccchhHHHh
Q 010723 249 IDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVG--GRFFIDLAMPLMLSW 324 (502)
Q Consensus 249 ~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~--~~~~~~~~~~~~~~~ 324 (502)
.....+|+.|+++|++++..++..++.+. .+|..+..+...+|++.+.++ ..+ ++.++++++|+..+|
T Consensus 363 ~~~~~lL~~Ye~eR~~~~~~~~~~s~~~~-------~l~~~~~~~~~~lR~~~~~l~-~~~~~~~~~~~~~~g~~~~Y 432 (570)
T 3fmw_A 363 WGSEELLDTYHDERHPVAERVLLNTRAQL-------ALMRPDEQHTTPLRGFVEELL-GTDEVNRYFTGMITGTDVRY 432 (570)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHSCSCTTTHHHHHHHHHHHT-TSHHHHHHHHHHHHSTTCCC
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHhcCCchHHHHHHHHHHHHh-cCHHHHHHHHHHHhCCCccc
Confidence 23478999999999999998887776532 345554444778999888777 344 366666666665454
No 7
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.96 E-value=3.9e-29 Score=261.16 Aligned_cols=245 Identities=17% Similarity=0.156 Sum_probs=168.2
Q ss_pred CCCeEEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCc---EEEeeEEEEecCCCchhhccc-cCC
Q 010723 18 GLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQ---CYAGDLLIGADGIWSKVRKNL-FGP 91 (502)
Q Consensus 18 ~~p~~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~---~~~adlvVgADG~~S~vR~~l-~~~ 91 (502)
..|.++.++|..|+++|.+.+. .+.++++++|+++++++++|++++.+++ +++||+||||||.+|.||+++ +..
T Consensus 96 ~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~ 175 (500)
T 2qa1_A 96 AWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAGFDF 175 (500)
T ss_dssp GGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTCHHHHHTTCCC
T ss_pred CCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcchHHHHHcCCCc
Confidence 3467899999999999999774 3679999999999999999999998875 899999999999999999998 333
Q ss_pred CCCcccceEEEEEEecCCCCCccccceEEEecCceEEEEEeCCCCeEEEEEEEcCCCCCCCCCcchHHHHHHHhhCCChH
Q 010723 92 QEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDN 171 (502)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 171 (502)
....+.. ..+.+.+... . ... .+.++..++++++++|.+++.+.+++................+++.+.+..+...
T Consensus 176 ~~~~~~~-~~~~~~~~~~-~-~~~-~~~~~~~~~g~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 251 (500)
T 2qa1_A 176 PGTAATM-EMYLADIKGV-E-LQP-RMIGETLPGGMVMVGPLPGGITRIIVCERGTPPQRRETPPSWHEVADAWKRLTGD 251 (500)
T ss_dssp CEECCCC-EEEEEEEESC-C-CCC-EEEEEEETTEEEEEEEETTTEEEEEEEETTCCC-----CCCHHHHHHHHHHHHSC
T ss_pred CCCccce-EEEEEEEEeC-C-CCC-ceEEEECCCcEEEEEEcCCCEEEEEEEcCCCCCccccCCCCHHHHHHHHHHhcCC
Confidence 3333333 3344433321 1 111 1344556677788889888876666554322111111112334444443321100
Q ss_pred HHHHHHcCCccce-eeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCCChhh
Q 010723 172 VVDLILATDEEAI-LRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPID 250 (502)
Q Consensus 172 ~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~~ 250 (502)
.+. .....+ ..+... .....+|..|||+|+|||||.|+|++|||||+||+||.+|+|+|+.++++ ..
T Consensus 252 ---~~~-~~~~~~~~~~~~~-~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g-------~~ 319 (500)
T 2qa1_A 252 ---DIA-HAEPVWVSAFGNA-TRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNG-------TA 319 (500)
T ss_dssp ---CCT-TSEEEEEEEEECC-EEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTT-------SS
T ss_pred ---CCC-ccceeEEEEeccC-cEEccccccCCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcC-------CC
Confidence 000 011111 112221 13457899999999999999999999999999999999999999998764 23
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 010723 251 IVSALKSYERARRLRVAVIHGLARSAAV 278 (502)
Q Consensus 251 ~~~~L~~Y~~~R~~~~~~~~~~s~~~~~ 278 (502)
.+.+|++|+++|++++..++..++....
T Consensus 320 ~~~~L~~Y~~eR~~~~~~~~~~s~~~~~ 347 (500)
T 2qa1_A 320 TEELLDSYHSERHAVGKRLLMNTQAQGL 347 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999887765443
No 8
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.96 E-value=1.4e-29 Score=257.85 Aligned_cols=268 Identities=18% Similarity=0.208 Sum_probs=187.1
Q ss_pred CeEEEeeHHHHHHHHHhccCC---CeEecCCeEEEEEeeCCeE--EEEEccCcEEEeeEEEEecCCCchhhccccCCCCC
Q 010723 20 PVTRVISRMTLQQILAKAVGD---EIILNESNVIDFKDHGDKV--SVVLENGQCYAGDLLIGADGIWSKVRKNLFGPQEA 94 (502)
Q Consensus 20 p~~~~i~R~~L~~~L~~~~~~---~~v~~~~~v~~i~~~~~~v--~v~~~dg~~~~adlvVgADG~~S~vR~~l~~~~~~ 94 (502)
++++.++|..|.+.|.+.+.. +.++++++|++++.+++++ .|++.+|++++||+||+|||.+|.+|+.+......
T Consensus 99 ~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg~~~~~ 178 (399)
T 2x3n_A 99 GYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLDIDVE 178 (399)
T ss_dssp GCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTSCCCCC
T ss_pred CccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChHHHHHhCCCccc
Confidence 458999999999999998753 5789999999999988888 89999999999999999999999999988432223
Q ss_pred c--ccce--EEEEEEecCCCCCccccceEEEecC-ceEEEEEeCCCCeEEEEEEEcCCCCCCCCC-cchHHHHHHHhhCC
Q 010723 95 I--YSGY--TCYTGIADFVPADIESVGYRVFLGH-KQYFVSSDVGAGKMQWYAFHKEPAGGVDGP-EGKKERLLKIFEGW 168 (502)
Q Consensus 95 ~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~ 168 (502)
. +.+. .++.+.+.. +.+.. . .++.+ +++++++|++++.+.|++...... ..... ....+.+.+.+..|
T Consensus 179 ~~p~~~~~~~~~~~~~~~---~~~~~-~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 252 (399)
T 2x3n_A 179 RRPYPSPMLVGTFALAPC---VAERN-R-LYVDSQGGLAYFYPIGFDRARLVVSFPREE-ARELMADTRGESLRRRLQRF 252 (399)
T ss_dssp CCCCSSCEEEEEEECCHH---HHHCE-E-EEECTTSCEEEEEEETTTEEEEEEECCHHH-HHHHHHSTTSHHHHHHHHTT
T ss_pred cCCCCCCceEEEEEEecC---CCCCc-c-EEEcCCCcEEEEEEcCCCEEEEEEEeCccc-cccccccCCHHHHHHHHhhc
Confidence 3 4454 555554331 11111 2 45566 778888899888888876432110 00000 02345677777788
Q ss_pred ChHHH-HHHHcCCccceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCCC
Q 010723 169 CDNVV-DLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKT 247 (502)
Q Consensus 169 ~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~ 247 (502)
.+.+. ..+.......+..+++.......+|..+||+|+|||||.|+|++|||+|+||+||..|+++|..+++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~----- 327 (399)
T 2x3n_A 253 VGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDA----- 327 (399)
T ss_dssp CCGGGHHHHHTCCCSTTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTS-----
T ss_pred CCcchhhHHhcCCccceEEechhhcccccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhccc-----
Confidence 77662 333433321234445554345678999999999999999999999999999999999999999876532
Q ss_pred hhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCccchhhhcccCCCCc
Q 010723 248 PIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGR 307 (502)
Q Consensus 248 ~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~ 307 (502)
.+...+|+.|+++|++++..++..++....+ +....++..++ +..|.++..
T Consensus 328 -~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~-------~~~~~~~~~~~-~~~~~~~~~ 378 (399)
T 2x3n_A 328 -CALEDALAGYQAERFPVNQAIVSYGHALATS-------LEDRQRFAGVF-DTALQGSSR 378 (399)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------TTCHHHHHHHH-HC-------
T ss_pred -chHHHHHHHHHHHhccHHHHHHHHHHHhhhh-------hcccCchHHHH-HHHHhhhcC
Confidence 3457899999999999999998888765433 22223344556 666665544
No 9
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.96 E-value=9.6e-28 Score=245.18 Aligned_cols=238 Identities=31% Similarity=0.479 Sum_probs=173.8
Q ss_pred EEEeeHHHHHHHHHhccC----CCeEecCCeEEEEEeeCCeEEEEEcc---C--cEEEeeEEEEecCCCchhhccccC-C
Q 010723 22 TRVISRMTLQQILAKAVG----DEIILNESNVIDFKDHGDKVSVVLEN---G--QCYAGDLLIGADGIWSKVRKNLFG-P 91 (502)
Q Consensus 22 ~~~i~R~~L~~~L~~~~~----~~~v~~~~~v~~i~~~~~~v~v~~~d---g--~~~~adlvVgADG~~S~vR~~l~~-~ 91 (502)
.+.++|..|++.|.+.+. .+.++++++|++++. ++++++++.+ | ++++||+||||||.+|.||+.+.+ .
T Consensus 101 ~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~~~~ 179 (410)
T 3c96_A 101 QYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVGADGIHSAVRAHLHPDQ 179 (410)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEECCCTTCHHHHHHCTTC
T ss_pred eeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEECCCccchhHHHhcCCC
Confidence 678999999999998763 246999999999998 7788888876 7 579999999999999999999853 3
Q ss_pred CCCcccceEEEEEEecCCCCCccccceEEEec--CceEEEEEeCCC-------CeEEEEEEEcCC------CCCCCCCcc
Q 010723 92 QEAIYSGYTCYTGIADFVPADIESVGYRVFLG--HKQYFVSSDVGA-------GKMQWYAFHKEP------AGGVDGPEG 156 (502)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~-------~~~~~~~~~~~~------~~~~~~~~~ 156 (502)
....|.+...|.+.....+. .... ...+++ .+..++++|+.+ ..++|++..... .........
T Consensus 180 ~~~~~~g~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 257 (410)
T 3c96_A 180 RPLSHGGITMWRGVTEFDRF-LDGK-TMIVANDEHWSRLVAYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDG 257 (410)
T ss_dssp CCCEEEEEEEEEEEEEESCC-TTSS-EEEEEECTTCCEEEEEECCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBC
T ss_pred CCCCcCCeeEEEeecccccc-cCCC-eEEEecCCCCcEEEEEecCCcccCCCCcEEEEEEEecCcccccCCCccccCCCC
Confidence 34567776666665432211 1111 223333 355677788753 345676654321 001111223
Q ss_pred hHHHHHHHhhCCCh---HHHHHHHcCCccceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHH
Q 010723 157 KKERLLKIFEGWCD---NVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAV 233 (502)
Q Consensus 157 ~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~ 233 (502)
..+++.+.+..|.+ .+..++.... .+..+++....+.++|..|||+|||||||.|+|++|||+|+||+||.+|++
T Consensus 258 ~~~~l~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~ 335 (410)
T 3c96_A 258 RLEDVLPFFADWDLGWFDIRDLLTRNQ--LILQYPMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAA 335 (410)
T ss_dssp CHHHHHHHHTTCCBTTBCHHHHHHTCS--EEEEEEEEECCCCSCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHH
T ss_pred CHHHHHHHhcCCCCchhHHHHHHhcCc--ccceeecccCCCccccccCCEEEEecccCCCCCccchhHHHHHHHHHHHHH
Confidence 46778888888754 3455665543 244556666556779999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCChhhHHHHHHHHHHHhHHHHHHHHHHHH
Q 010723 234 ELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 274 (502)
Q Consensus 234 ~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~ 274 (502)
+|... .+...+|+.|+++|++++..++..++
T Consensus 336 ~L~~~----------~~~~~~L~~Ye~~r~~~~~~~~~~s~ 366 (410)
T 3c96_A 336 ALARN----------ADVAAALREYEEARRPTANKIILANR 366 (410)
T ss_dssp HHHHC----------SSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcc----------CCHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 99863 24578999999999999999888776
No 10
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.95 E-value=3.6e-28 Score=245.69 Aligned_cols=233 Identities=23% Similarity=0.287 Sum_probs=166.0
Q ss_pred EEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchhhccccCCCCCcccce
Q 010723 22 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVRKNLFGPQEAIYSGY 99 (502)
Q Consensus 22 ~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~ 99 (502)
++.++|..|.+.|.+.+. .+.++++++|++++. ++ +|++.+|++++||+||+|||.+|.+|+.+.......+.+.
T Consensus 101 ~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~~~~~~~~~~~ 177 (379)
T 3alj_A 101 WRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG-RLTLQTGEVLEADLIVGADGVGSKVRDSIGFKQDRWVSKD 177 (379)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT-EEEETTSCEEECSEEEECCCTTCHHHHHHCCCEEEEEEEE
T ss_pred eEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC-EEEECCCCEEEcCEEEECCCccHHHHHHhcCCCCcCcCCc
Confidence 689999999999999874 367999999999987 34 8888999999999999999999999999854334456666
Q ss_pred EEEEEEecCC----CCCccccceEE--EecCceEEEEEeCCCCeEEEEEEEcCCCCCCCCCcchHHHHHHHhhCCChHHH
Q 010723 100 TCYTGIADFV----PADIESVGYRV--FLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVV 173 (502)
Q Consensus 100 ~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 173 (502)
.++.+.++.. +........+. +++++.+++++|++++...|++..... . .. + +.+.+.+..|.+.+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~-~~-~----~~l~~~~~~~~~~~~ 250 (379)
T 3alj_A 178 GLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAA-D-PR-G----SSVPIDLEVWVEMFP 250 (379)
T ss_dssp EEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEECTT-C-TT-T----TCSSCCHHHHHHHCG
T ss_pred EEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEecCC-C-CC-H----HHHHHHHhcCCchhc
Confidence 6666665432 21111122333 456777888899999988887665431 1 00 1 112222222222211
Q ss_pred ---HHHHcCCccceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCCChhh
Q 010723 174 ---DLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPID 250 (502)
Q Consensus 174 ---~~~~~~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~~ 250 (502)
+++...+...+..++++......+|..|||+|||||||.++|++|||+|+||+||..|+++|... .+
T Consensus 251 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~----------~~ 320 (379)
T 3alj_A 251 FLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEG----------SS 320 (379)
T ss_dssp GGHHHHHHHHTCTTCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTSS----------SC
T ss_pred cHHHHHhhCCccceEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhccc----------cC
Confidence 33332211223444555544467899999999999999999999999999999999999998642 24
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHH
Q 010723 251 IVSALKSYERARRLRVAVIHGLAR 274 (502)
Q Consensus 251 ~~~~L~~Y~~~R~~~~~~~~~~s~ 274 (502)
...+|+.|+++|++++..++..+.
T Consensus 321 ~~~~l~~Y~~~r~~~~~~~~~~s~ 344 (379)
T 3alj_A 321 VEDALVAWETRIRPITDRCQALSG 344 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 578999999999999998887773
No 11
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.95 E-value=4.2e-27 Score=253.49 Aligned_cols=241 Identities=17% Similarity=0.194 Sum_probs=158.3
Q ss_pred eEEEeeHHHHHHHHHhccC-----CCeEecCCeEEEEEeeC--------CeEEEEEc-----------------------
Q 010723 21 VTRVISRMTLQQILAKAVG-----DEIILNESNVIDFKDHG--------DKVSVVLE----------------------- 64 (502)
Q Consensus 21 ~~~~i~R~~L~~~L~~~~~-----~~~v~~~~~v~~i~~~~--------~~v~v~~~----------------------- 64 (502)
..+.++|..|+++|.+.+. .+.++++++|++++.++ ++|++++.
T Consensus 112 ~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (665)
T 1pn0_A 112 HQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRS 191 (665)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCC
T ss_pred eeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEEEecccccccccccccccccccccc
Confidence 4678999999999998873 25799999999998875 46888764
Q ss_pred -------------------cC--cEEEeeEEEEecCCCchhhcccc-CCCCCcccceEEEEEEecCCC-CCccc--cceE
Q 010723 65 -------------------NG--QCYAGDLLIGADGIWSKVRKNLF-GPQEAIYSGYTCYTGIADFVP-ADIES--VGYR 119 (502)
Q Consensus 65 -------------------dg--~~~~adlvVgADG~~S~vR~~l~-~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~ 119 (502)
+| ++++||+||||||++|.||+++. ......+.. .| ++++..+ .+.+. ....
T Consensus 192 ~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~~~--~~-~v~d~~~~~~~p~~~~~~~ 268 (665)
T 1pn0_A 192 NLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQTDY--IW-GVLDAVPASNFPDIRSRCA 268 (665)
T ss_dssp HHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEEEE--EE-EEEEEEEECCCTTTTSEEE
T ss_pred cccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCccE--EE-EEEEEEECCCCCCcceEEE
Confidence 35 47999999999999999999983 332233322 22 2222111 11111 1122
Q ss_pred EEecCceEEEEEeCCCCeEEEEEEEcCCC---CCCCCCcchHHHHHHHhhCCChHHHHHHHc--CCccceeeeeccc--C
Q 010723 120 VFLGHKQYFVSSDVGAGKMQWYAFHKEPA---GGVDGPEGKKERLLKIFEGWCDNVVDLILA--TDEEAILRRDIYD--R 192 (502)
Q Consensus 120 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~--~ 192 (502)
++..+.+.++++|.+++.++|++...... ........+.+++.+.+.. .+.. .....+..+.++. .
T Consensus 269 ~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 341 (665)
T 1pn0_A 269 IHSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVIANAKK-------IFHPYTFDVQQLDWFTAYHIGQ 341 (665)
T ss_dssp EECSSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHHHHHHH-------HHTTSCCEEEEEEEEEEEEEEE
T ss_pred EEeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHHHHHHHH-------HhCcccCceeeEEEEEeeeccc
Confidence 33334566777898888777766554321 0001111233444433321 1110 0111122233332 1
Q ss_pred CCCCccc-CCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCCChhhHHHHHHHHHHHhHHHHHHHHH
Q 010723 193 TPIFTWG-RGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHG 271 (502)
Q Consensus 193 ~~~~~~~-~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~ 271 (502)
..+.+|. .|||+|+|||||.|+|++|||||+||+||.+|+|+|+.++++ ...+.+|++|+++|++++..++.
T Consensus 342 r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g-------~a~~~lL~tYe~eR~p~a~~~i~ 414 (665)
T 1pn0_A 342 RVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTG-------RAKRDILKTYEEERQPFAQALID 414 (665)
T ss_dssp EECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTT-------CBCGGGGHHHHHHHHHHHHHHHH
T ss_pred eehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcC-------CCcHHHHHHHHHHHHHHHHHHHH
Confidence 3457898 799999999999999999999999999999999999998864 23367899999999999999888
Q ss_pred HHHHHHH
Q 010723 272 LARSAAV 278 (502)
Q Consensus 272 ~s~~~~~ 278 (502)
+++....
T Consensus 415 ~s~~~~~ 421 (665)
T 1pn0_A 415 FDHQFSR 421 (665)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766443
No 12
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.95 E-value=9.3e-28 Score=243.92 Aligned_cols=281 Identities=13% Similarity=0.095 Sum_probs=176.4
Q ss_pred CeEEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeC-CeEEEEE-ccCc--EEEeeEEEEecCCCchhhccccCCCC
Q 010723 20 PVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHG-DKVSVVL-ENGQ--CYAGDLLIGADGIWSKVRKNLFGPQE 93 (502)
Q Consensus 20 p~~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~-~~v~v~~-~dg~--~~~adlvVgADG~~S~vR~~l~~~~~ 93 (502)
+.++.++|..|.+.|.+.+. .+.++++++|++++.++ +.+.|++ .+|+ +++||+||+|||.+|.||+.+.....
T Consensus 95 ~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~~~~~ 174 (394)
T 1k0i_A 95 KTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGISRQSIPAERL 174 (394)
T ss_dssp CCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCSTGGGSCGGGC
T ss_pred CceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcHHHHhcCcccc
Confidence 45788999999999988763 46799999999998764 5678888 7887 79999999999999999999843222
Q ss_pred Ccccce--EEEEEEecCCCCCccccceEEEecCceEEEEEeCCCCeEEEEEEEcCCCCCCCCCcchHHHHHHHh-hCCCh
Q 010723 94 AIYSGY--TCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIF-EGWCD 170 (502)
Q Consensus 94 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~ 170 (502)
..|.+. ..+.++....+.... ...+...+++++++++.+++...|++........ .....+.+.+.+ +.+.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~ 249 (394)
T 1k0i_A 175 KVFERVYPFGWLGLLADTPPVSH--ELIYANHPRGFALCSQRSATRSQYYVQVPLSEKV---EDWSDERFWTELKARLPS 249 (394)
T ss_dssp EEEEEEEEEEEEEEEESSCCSCS--SCEEECCTTCCEEEEEEETTEEEEEEEECTTCCG---GGCCHHHHHHHHHHTSCH
T ss_pred ccccccccceeEEEecCCCCCcc--ceEEEEcCCceEEEEecCCCcEEEEEEeCCCCCc---cccCHHHHHHHHHHhhCc
Confidence 334332 344444322222111 1222233455555555556666676655332111 111122222222 22332
Q ss_pred HHHHHHHcCCccceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCCChhh
Q 010723 171 NVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPID 250 (502)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~~ 250 (502)
.....+...+......+++.. ....+|..|||+|+|||||.|+|++|||+|+||+||..|+++|..+++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~-------- 320 (394)
T 1k0i_A 250 EVAEKLVTGPSLEKSIAPLRS-FVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREG-------- 320 (394)
T ss_dssp HHHHHCCCCCEEEEEEEEEEE-EEEECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred ccccccccCcceeeEEEEhhh-hhccccccCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhccC--------
Confidence 222222111111111122222 23457889999999999999999999999999999999999999876431
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCccchhhhcccCCCCccc--ceeeeeccc
Q 010723 251 IVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVG--GRFFIDLAM 318 (502)
Q Consensus 251 ~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~--~~~~~~~~~ 318 (502)
...+|+.|+++|++++..++..++....+.. .+....++...+|+..|..+...+ ++.+++.++
T Consensus 321 ~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~----~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~ 386 (394)
T 1k0i_A 321 RGELLERYSAICLRRIWKAERFSWWMTSVLH----RFPDTDAFSQRIQQTELEYYLGSEAGLATIAENYV 386 (394)
T ss_dssp CGGGGGGHHHHHHHHHHHHHHHHHHHHHHHS----CCTTCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHS
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCCChHHHHHHHHHHHhhcCCHHHHHHHHHHhc
Confidence 2468999999999999998888876554432 223334556677777766555444 244444443
No 13
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.94 E-value=2.7e-26 Score=242.70 Aligned_cols=236 Identities=17% Similarity=0.148 Sum_probs=156.6
Q ss_pred eEEEeeHHHHHHHHHhccCCCeEecCCeEEEEEeeCCeEEEEEcc---C--cEEEeeEEEEecCCCchhhccc-cCCCCC
Q 010723 21 VTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN---G--QCYAGDLLIGADGIWSKVRKNL-FGPQEA 94 (502)
Q Consensus 21 ~~~~i~R~~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v~v~~~d---g--~~~~adlvVgADG~~S~vR~~l-~~~~~~ 94 (502)
.++.++|..|+++|.+.+... ++++++|+++++++++|++++.+ | ++++||+||||||.+|.||+.+ ++....
T Consensus 131 ~~~~i~~~~l~~~L~~~a~~~-v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~ 209 (549)
T 2r0c_A 131 PDAICPQHWLAPLLAEAVGER-LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASSPTRKALGIDAPPR 209 (549)
T ss_dssp CCEECCHHHHHHHHHHHHGGG-EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHTCCCCBS
T ss_pred cccccCHHHHHHHHHHHHHHh-cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcCCCCCCC
Confidence 368999999999999988655 99999999999999999998876 6 4799999999999999999998 444444
Q ss_pred cccceEEEEEEecCCCC----CccccceEEEecCc-eEEEEEeCCCC-eEEEEEEEcCCCCCCCCCcchHHHHHHHhhCC
Q 010723 95 IYSGYTCYTGIADFVPA----DIESVGYRVFLGHK-QYFVSSDVGAG-KMQWYAFHKEPAGGVDGPEGKKERLLKIFEGW 168 (502)
Q Consensus 95 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 168 (502)
.+.+. .+...+..... ........++..++ ..++++|.++. .+.+.. ..+... ...+...+.+.+.+..
T Consensus 210 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~--~~~~~~-~~~~~~~~~l~~~~~~- 284 (549)
T 2r0c_A 210 HRTQV-FRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGRGLYRLTV--GVDDAS-KSTMDSFELVRRAVAF- 284 (549)
T ss_dssp SCCEE-EEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSSSEEEEEE--ECSTTC-CSCCCHHHHHHHHBCS-
T ss_pred cccce-EEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCCcEEEEEe--cCCCCC-CCHHHHHHHHHHHhCC-
Confidence 44432 22222221100 00111223333444 56677787654 333333 222111 1222333444444332
Q ss_pred ChHHHHHHHcCCccceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCCCh
Q 010723 169 CDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTP 248 (502)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~ 248 (502)
. + ..+......|.+.. ..+.+|..|||+|+|||||.|+|++|||||+||+||.+|+|+|+.++++.
T Consensus 285 ~--~-----~~~~~~~~~~~~~~-~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~------ 350 (549)
T 2r0c_A 285 D--T-----EIEVLSDSEWHLTH-RVADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGW------ 350 (549)
T ss_dssp C--C-----CCEEEEEEEEEECC-EECSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTC------
T ss_pred C--C-----ceeEEEEecchhHh-hhHHhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcCC------
Confidence 0 0 01111112233322 34578999999999999999999999999999999999999999987642
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 010723 249 IDIVSALKSYERARRLRVAVIHGLARSAA 277 (502)
Q Consensus 249 ~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~ 277 (502)
..+.+|++|+++|++++..++..++...
T Consensus 351 -a~~~lL~~Y~~eR~~~a~~~~~~s~~~~ 378 (549)
T 2r0c_A 351 -AGPGLLATYEEERRPVAITSLEEANVNL 378 (549)
T ss_dssp -SCTTTTHHHHHHHHHHHHHHHHC-----
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2357899999999999999988877544
No 14
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.94 E-value=1.9e-26 Score=243.70 Aligned_cols=240 Identities=20% Similarity=0.217 Sum_probs=159.2
Q ss_pred EEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCC----eEEEEEccC---cEEEeeEEEEecCCCchhhccc-cCC
Q 010723 22 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGD----KVSVVLENG---QCYAGDLLIGADGIWSKVRKNL-FGP 91 (502)
Q Consensus 22 ~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~----~v~v~~~dg---~~~~adlvVgADG~~S~vR~~l-~~~ 91 (502)
++.++|..|++.|.+.+. .++++++++|++++++++ +|++++.++ .+++||+||+|||.+|.||+.+ ++.
T Consensus 114 ~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~ 193 (535)
T 3ihg_A 114 WAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESLGIGR 193 (535)
T ss_dssp CBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHTTCCE
T ss_pred ccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHcCCCc
Confidence 678999999999999874 378999999999999988 999999887 7899999999999999999998 444
Q ss_pred CCCcccceEEEEEEecCCCCCc-cc-cceEEEecCceEEEEEeCCCC-eEEEEEEEcCCCCCCCCCcchHHHHHHHhhCC
Q 010723 92 QEAIYSGYTCYTGIADFVPADI-ES-VGYRVFLGHKQYFVSSDVGAG-KMQWYAFHKEPAGGVDGPEGKKERLLKIFEGW 168 (502)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 168 (502)
....+.+...........+... .. ..+..+..++...+++|+.+. ...+.+... +...........+.+.+.+..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~l~~- 271 (535)
T 3ihg_A 194 YGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHPEFKGTFGPTDRPDRHTLFVEYD-PDEGERPEDFTPQRCVELIGL- 271 (535)
T ss_dssp EEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEECSSCEEEEEECSSTTEEEEEEEEC-TTTTCCGGGCCHHHHHHHHHH-
T ss_pred CCCCccceEEEEEEeccChhhccCCceEEEEEECCCceEEEEEecCCCEEEEEEeeC-ccccCccccCCHHHHHHHHHH-
Confidence 3333332211111111111111 11 122334455556666677653 333333322 211111111222333332221
Q ss_pred ChHHHHHHHc----CCccceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCC
Q 010723 169 CDNVVDLILA----TDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNE 244 (502)
Q Consensus 169 ~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~ 244 (502)
.+.. .+......|++.. ....+|..|||+|+|||||.|+|++|||+|+||+||.+|+|+|+.++++.
T Consensus 272 ------~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~-- 342 (535)
T 3ihg_A 272 ------ALDAPEVKPELVDIQGWEMAA-RIAERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQ-- 342 (535)
T ss_dssp ------HHTCSSCCCEEEEEEEEEEEE-EEESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTS--
T ss_pred ------HhCCCCCceeEEEeeEeeeeE-EEECccccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcCC--
Confidence 1110 0111122233332 34578999999999999999999999999999999999999999987642
Q ss_pred CCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 010723 245 SKTPIDIVSALKSYERARRLRVAVIHGLARSAA 277 (502)
Q Consensus 245 ~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~ 277 (502)
..+.+|++|+++|++++..+++.|....
T Consensus 343 -----~~~~lL~~Ye~eR~p~a~~~~~~s~~~~ 370 (535)
T 3ihg_A 343 -----AGAGLLDTYEDERKVAAELVVAEALAIY 370 (535)
T ss_dssp -----SCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----CcHHHHHhhHHHHHHHHHHHHHHHHHhh
Confidence 2357899999999999999988887543
No 15
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.93 E-value=8.5e-26 Score=242.87 Aligned_cols=241 Identities=15% Similarity=0.188 Sum_probs=153.9
Q ss_pred CeEEEeeHHHHHHHHHhccC----CCeEecCCeEEEEEeeCC----eEEEEEc------cC--cEEEeeEEEEecCCCch
Q 010723 20 PVTRVISRMTLQQILAKAVG----DEIILNESNVIDFKDHGD----KVSVVLE------NG--QCYAGDLLIGADGIWSK 83 (502)
Q Consensus 20 p~~~~i~R~~L~~~L~~~~~----~~~v~~~~~v~~i~~~~~----~v~v~~~------dg--~~~~adlvVgADG~~S~ 83 (502)
+..+.++|..|+++|.+.+. .+.++++++|++++++++ +|+|+++ +| ++++||+||||||.+|.
T Consensus 133 ~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 133 FPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp SCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH
T ss_pred CceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchH
Confidence 45689999999999999863 237899999999998763 5888876 46 47999999999999999
Q ss_pred hhcccc-CCCCCcccceEEEEEEecCCCCCccccceEEEecCceEEEEEeCCCC-eEEEEEEEcC--CCCCCCCCcchHH
Q 010723 84 VRKNLF-GPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAG-KMQWYAFHKE--PAGGVDGPEGKKE 159 (502)
Q Consensus 84 vR~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~--~~~~~~~~~~~~~ 159 (502)
||+.+. ......+.....+..+......+.......++. ++++++++|.+++ .+++++.... ............+
T Consensus 213 vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~g~~~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e 291 (639)
T 2dkh_A 213 VRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVRYKVAIQS-EQGNVLIIPREGGHLVRFYVEMDKLDADERVASRNITVE 291 (639)
T ss_dssp HHHHTTCCCEECSCSCCEEEEEEEEEECCTTTTSEEEEEE-TTEEEEEEECTTSSCEEEEEECC-----------CCCHH
T ss_pred HHHHhCCCCCCCCccceEEEEEEEEccCCCccceeEEEEc-CCceEEEEEcCCCcEEEEEEECCCcCcccccccCCCCHH
Confidence 999983 322222322222221111001110011122223 5667777898877 5666554332 1100011112233
Q ss_pred HHHHHhhCCChHHHHHHHc--CCccceeeeecccC--CCCCccc------------CCCEEEEcCCccccCCCchhhhhH
Q 010723 160 RLLKIFEGWCDNVVDLILA--TDEEAILRRDIYDR--TPIFTWG------------RGRVTLLGDSVHAMQPNLGQGGCM 223 (502)
Q Consensus 160 ~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~--~~~~~~~------------~grvvLvGDAAH~~~P~~GqG~n~ 223 (502)
++.+.+.. .+.. .....+..+.++.. ....+|. .|||+|+|||||.++|++|||||+
T Consensus 292 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ 364 (639)
T 2dkh_A 292 QLIATAQR-------VLHPYKLEVKNVPWWSVYEIGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNF 364 (639)
T ss_dssp HHHHHHHH-------HHTTSCEEEEEEEEEEEECCCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHH
T ss_pred HHHHHHHH-------HhCcccCcceeeeEEEecccccchhhhhhccccccccccCccCcEEEEecccccCCCcccccchh
Confidence 44333221 1111 00011222233321 2345676 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCChhhHHHHHHHHHHHhHHHHHHHHHHHHH
Q 010723 224 AIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 275 (502)
Q Consensus 224 al~Da~~La~~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~ 275 (502)
||+||.+|+|+|+.++++. ..+.+|++|+++|++++..++..++.
T Consensus 365 ai~DA~nLawkLa~vl~g~-------a~~~lL~~Ye~eR~~~a~~~~~~s~~ 409 (639)
T 2dkh_A 365 SMQDSFNLGWKLAAVLRKQ-------CAPELLHTYSSERQVVAQQLIDFDRE 409 (639)
T ss_dssp HHHHHHHHHHHHHHHHTTS-------BCGGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCC-------CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988642 23578999999999999988877764
No 16
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.93 E-value=4.6e-26 Score=230.40 Aligned_cols=250 Identities=18% Similarity=0.195 Sum_probs=160.7
Q ss_pred EEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchhhcccc---CCCCCcc
Q 010723 22 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVRKNLF---GPQEAIY 96 (502)
Q Consensus 22 ~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR~~l~---~~~~~~~ 96 (502)
.+.++|..|.+.|.+.+. .+.++++++|++++.. ++++||+||+|||.+|. |+.+. +.....+
T Consensus 92 ~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S~-R~~l~~~~g~~~~~~ 159 (381)
T 3c4a_A 92 LCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLANGVNHK-TAHFTEALVPQVDYG 159 (381)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECCGGGGG-TCCSSGGGCCCCEEE
T ss_pred eeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECCCCCch-HHhhhhhcCCCcccC
Confidence 468999999999999874 3679999999887542 13579999999999999 99873 2222223
Q ss_pred cceEEEEEEecCCCCCccccceE-EEecCceE-EEEEeCCCCeEEEEEEEcCCC---CCC-C-CCcchHHHHHHHhhCCC
Q 010723 97 SGYTCYTGIADFVPADIESVGYR-VFLGHKQY-FVSSDVGAGKMQWYAFHKEPA---GGV-D-GPEGKKERLLKIFEGWC 169 (502)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~---~~~-~-~~~~~~~~l~~~~~~~~ 169 (502)
.+..+|.+..... +..... .+.+.+.+ +..+|++++...+.+...... ... . ..+...+.+.+.|..|.
T Consensus 160 ~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 235 (381)
T 3c4a_A 160 RNKYIWYGTSQLF----DQMNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAEL 235 (381)
T ss_dssp EEEEEEEEESSCC----SSEEEEEEEETTEEEEEEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHHTHHHH
T ss_pred CccEEEEecCCCC----CcceeeEeeCCCcEEEEEEEEecCCeEEEEEECCccccccCCcccCChHHHHHHHHHHhcccC
Confidence 3445665553221 111111 12334433 346788777654443331100 011 0 11233445555555543
Q ss_pred hHHHHHHHcCCccceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCCChh
Q 010723 170 DNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPI 249 (502)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~~ 249 (502)
+.. +++. ... ..++++...+..+|+.|||+|||||||+|+|++|||+|+||+||.+|+++|... .
T Consensus 236 ~~~-~l~~---~~~-~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~----------~ 300 (381)
T 3c4a_A 236 GGH-GLVS---QPG-LGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE----------D 300 (381)
T ss_dssp TTC-CCBC---CTT-TCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS----------S
T ss_pred CCc-hhhc---CCC-cceeeeccccCCCcccCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc----------c
Confidence 221 1111 111 134555445667999999999999999999999999999999999999999873 2
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCccchhhhcccCC
Q 010723 250 DIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPH 304 (502)
Q Consensus 250 ~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~ 304 (502)
+...+|+.|+++|++++..++..++...........+|. ..+..+.|+++|..
T Consensus 301 ~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~ 353 (381)
T 3c4a_A 301 GVPAALKRFEERALPLVQLFRGHADNSRVWFETVEERMH--LSSAEFVQSFDARR 353 (381)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCC--------CHHHHGGGTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhchhhhhc--CCHHHHHHHHhhcc
Confidence 457899999999999999999988876544333334444 36677888888776
No 17
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.92 E-value=6.9e-24 Score=219.34 Aligned_cols=244 Identities=15% Similarity=0.072 Sum_probs=161.4
Q ss_pred eEEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEE-EEEc---cCc--EEEeeEEEEecCCCchhhccccCCC
Q 010723 21 VTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLE---NGQ--CYAGDLLIGADGIWSKVRKNLFGPQ 92 (502)
Q Consensus 21 ~~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~-v~~~---dg~--~~~adlvVgADG~~S~vR~~l~~~~ 92 (502)
.++.++|..|++.|.+.+. .+.++++++|++++.+++.++ |++. +|+ +++||+||+|||.+|.+|+.+....
T Consensus 93 ~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~~~~ 172 (453)
T 3atr_A 93 EGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLPPEL 172 (453)
T ss_dssp EEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSCTTS
T ss_pred CcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcCCCC
Confidence 4789999999999998873 467999999999998888765 5554 676 7999999999999999999883221
Q ss_pred ---CCcc--cceEEEEEEecCCCCCccccceEEEec----CceEEEEEeCCCCeEEEEEEEcCCCCCCCCCcchHHHHHH
Q 010723 93 ---EAIY--SGYTCYTGIADFVPADIESVGYRVFLG----HKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLK 163 (502)
Q Consensus 93 ---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 163 (502)
.+.+ ....++...+.......+.....++++ ++++++++|.+++.+++.+....... .....+.+.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~----~~~~~~~~~~ 248 (453)
T 3atr_A 173 PITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQGGMG----YPSIHEYYKK 248 (453)
T ss_dssp GGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETTEEEEEEEEESSSC----CCCHHHHHHH
T ss_pred CcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCCeEEEEEEecCCCC----CCCHHHHHHH
Confidence 1212 223455544322111111222234553 46677888988887766655432211 1112334444
Q ss_pred HhhCCChHHHHHHHcCCccceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCC
Q 010723 164 IFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSN 243 (502)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~ 243 (502)
.+..+.+.+. ...........+....+.++|+.+|++|+|||||.++|++|||+|+||+||..||++|.+++..+
T Consensus 249 ~l~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~- 323 (453)
T 3atr_A 249 YLDKYAPDVD----KSKLLVKGGALVPTRRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETG- 323 (453)
T ss_dssp HHHHHCTTEE----EEEEEEEEEEEEECSSCCSCSEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred HHHhhhhhcC----CCeEEeccceeccCCCCCCceecCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcC-
Confidence 3322111110 00000111122333345678999999999999999999999999999999999999999887642
Q ss_pred CCCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 010723 244 ESKTPIDIVSALKSYERARRLRVAVIHGLARSAAV 278 (502)
Q Consensus 244 ~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~ 278 (502)
....++|+.|+++|++++...+..++....
T Consensus 324 -----~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~ 353 (453)
T 3atr_A 324 -----DFSASGLWDMNICYVNEYGAKQASLDIFRR 353 (453)
T ss_dssp -----CCSTTTTTHHHHHHHHHTHHHHHHHHHHHH
T ss_pred -----CccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112468999999999999888776655443
No 18
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.91 E-value=5.3e-23 Score=215.90 Aligned_cols=249 Identities=13% Similarity=0.132 Sum_probs=169.0
Q ss_pred CCCeEEEeeHHHHHHHHHhcc--CCCeEecCCeEEEEEeeCCe---EEEEEccCc--EEEeeEEEEecCCCchhhccccC
Q 010723 18 GLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDK---VSVVLENGQ--CYAGDLLIGADGIWSKVRKNLFG 90 (502)
Q Consensus 18 ~~p~~~~i~R~~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~---v~v~~~dg~--~~~adlvVgADG~~S~vR~~l~~ 90 (502)
..+.++.++|..|.+.|.+.+ ..++++++++|++++.+++. |++...+|+ +++||+||+|||.+|.+|+.+..
T Consensus 101 ~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~lg~ 180 (512)
T 3e1t_A 101 PYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAVGE 180 (512)
T ss_dssp TTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGTCC
T ss_pred CcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHcCC
Confidence 346789999999999999877 34779999999999998875 455556785 89999999999999999999822
Q ss_pred CCCCcccceEEEEEEecC---CCCCccccceEEEecCceEEEEEeCCCCeEEEEEEEcCCCCCCCCCcchHHHHHHHhhC
Q 010723 91 PQEAIYSGYTCYTGIADF---VPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEG 167 (502)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 167 (502)
.....+....++.+.+.. .+.+.....+. +..++++++.+|+.++...+.+........ .......+.+.. +..
T Consensus 181 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~G~~~~~Pl~~~~~~vg~~~~~~~~~-~~~~~~~~~~~~-~l~ 257 (512)
T 3e1t_A 181 RVYSRFFQNVALYGYFENGKRLPAPRQGNILS-AAFQDGWFWYIPLSDTLTSVGAVVSREAAE-AIKDGHEAALLR-YID 257 (512)
T ss_dssp EEECSTTCEEEEEEEEESCCCCSTTCTTSEEE-EEETTEEEEEEECSSSEEEEEEEEEHHHHT-TTSSCHHHHHHH-HHH
T ss_pred CccCchhcceEEEEEecCCccCCCCCcCceEE-EEeCCceEEEEEeCCCeEEEEEEecHHHhh-hhcCCHHHHHHH-HHH
Confidence 112222334555555431 12222222233 334566788889998877666554321100 011122333333 444
Q ss_pred CChHHHHHHHcCCccc---eeeeeccc--CCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcC
Q 010723 168 WCDNVVDLILATDEEA---ILRRDIYD--RTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKS 242 (502)
Q Consensus 168 ~~~~~~~~~~~~~~~~---~~~~~i~~--~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~ 242 (502)
+.+.+.+.+....... +...++.. .....+|..+||+|||||||.++|+.|||+|+|++||..|+++|..++.+.
T Consensus 258 ~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~~ 337 (512)
T 3e1t_A 258 RCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAGE 337 (512)
T ss_dssp TSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHcCC
Confidence 6777777765443210 00001110 013457888999999999999999999999999999999999999887542
Q ss_pred CCCCChhhHHHHHHHHHHHhHHHHHHHHHHHHH
Q 010723 243 NESKTPIDIVSALKSYERARRLRVAVIHGLARS 275 (502)
Q Consensus 243 ~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~ 275 (502)
.+...+|+.|+++|+++...+.++...
T Consensus 338 ------~~~~~aL~~Ye~~~~~~~~~~~~~~~~ 364 (512)
T 3e1t_A 338 ------MSEQRCFEEFERRYRREYGNFYQFLVA 364 (512)
T ss_dssp ------SCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999887766654
No 19
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.91 E-value=7.4e-23 Score=207.21 Aligned_cols=237 Identities=16% Similarity=0.117 Sum_probs=153.6
Q ss_pred CCCeEEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEE--ccC--cEEEeeEEEEecCCCchhhcccc-C
Q 010723 18 GLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVL--ENG--QCYAGDLLIGADGIWSKVRKNLF-G 90 (502)
Q Consensus 18 ~~p~~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~--~dg--~~~~adlvVgADG~~S~vR~~l~-~ 90 (502)
+...+++++|..|++.|.+.+. .+.++++++|+++..+++.+.... .++ .+++||+||||||++|.||+.+. .
T Consensus 92 ~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~g~~ 171 (397)
T 3oz2_A 92 GNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLK 171 (397)
T ss_dssp SCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCG
T ss_pred CCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCccccHHHHHcCCC
Confidence 3456899999999999999874 367899999999998888765332 233 36899999999999999999983 3
Q ss_pred CCCCcccceEEEEEEecCCCCCccccceEEEec---CceEEEEEeCCCCeEEEEEEEcCCCCCCCCCcchHHHHHHHhhC
Q 010723 91 PQEAIYSGYTCYTGIADFVPADIESVGYRVFLG---HKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEG 167 (502)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 167 (502)
.....+.......... ....+.+.....++++ ++.+++.+|.+++...+........ ........+.+.++++.
T Consensus 172 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~--~~~~~~~~~~l~~~~~~ 248 (397)
T 3oz2_A 172 SVILARNDIISALQYR-MINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINW--IHNRFELKNYLDRFIEN 248 (397)
T ss_dssp GGCCCGGGEEEEEEEE-EESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTT--SCSHHHHHHHHHHHHHT
T ss_pred cccccceeeeeeEEEE-eeccccCcccceeeeeccCCCceEEEeecccceeEEEEeeccch--hhhhhhHHHHHHHHHHh
Confidence 3333344333222221 1122223333344443 4567777788777665544332211 11111112222222222
Q ss_pred CChHHHHHHHcCCccceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCCC
Q 010723 168 WCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKT 247 (502)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~ 247 (502)
.+.+. ...........+.......+|+.+||+|+|||||.++|++|||+|+||+||..||++|.++++.+
T Consensus 249 -~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~----- 318 (397)
T 3oz2_A 249 -HPGLK----KGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESN----- 318 (397)
T ss_dssp -CHHHH----TSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred -Ccccc----ccceeeeeeccccccCcccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcC-----
Confidence 23221 22222222233333334456788999999999999999999999999999999999999998764
Q ss_pred hhhHHHHHHHHHHHhHHHHHH
Q 010723 248 PIDIVSALKSYERARRLRVAV 268 (502)
Q Consensus 248 ~~~~~~~L~~Y~~~R~~~~~~ 268 (502)
+..+++|+.|++.++.+...
T Consensus 319 -~~~~~~L~~Ye~~~~~~~~~ 338 (397)
T 3oz2_A 319 -DYSPQMMQKYEKLIKERFER 338 (397)
T ss_dssp -CCSHHHHHHHHHHHHHHHHH
T ss_pred -CccHHHHHHHHHHHHHHHHH
Confidence 33478999999998877654
No 20
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.90 E-value=2.6e-22 Score=203.69 Aligned_cols=244 Identities=15% Similarity=0.045 Sum_probs=163.2
Q ss_pred CCeEEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEE-EEEc---cCcEEEeeEEEEecCCCchhhcccc-CC
Q 010723 19 LPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLE---NGQCYAGDLLIGADGIWSKVRKNLF-GP 91 (502)
Q Consensus 19 ~p~~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~-v~~~---dg~~~~adlvVgADG~~S~vR~~l~-~~ 91 (502)
.+.++.++|..|.+.|.+.+. .++++++++|++++.+++.++ |++. ++.+++||+||+|||.+|.+|+.+. ..
T Consensus 93 ~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~g~~~ 172 (397)
T 3cgv_A 93 NEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLKS 172 (397)
T ss_dssp CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCCT
T ss_pred CceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhcCCCc
Confidence 456999999999999998774 367999999999999888877 7773 4568999999999999999999883 22
Q ss_pred -CC-CcccceEEEEEEecCCCCCccccceEEEe---cCceEEEEEeCCCCeEEEEEEEcCCCCCCCCCcchHHHHHHHhh
Q 010723 92 -QE-AIYSGYTCYTGIADFVPADIESVGYRVFL---GHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFE 166 (502)
Q Consensus 92 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 166 (502)
.. +.... .++...+.. ...+.....+++ .++++++.+|.+++...+.+....... .......+.+.+++.
T Consensus 173 ~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~--~~~~~~~~~l~~~~~ 247 (397)
T 3cgv_A 173 VILARNDII-SALQYRMIN--VDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWI--HNRFELKNYLDRFIE 247 (397)
T ss_dssp TCCCGGGEE-EEEEEEEES--CCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTC--SCHHHHHHHHHHHHH
T ss_pred cCCChhhee-EEEEEEecc--CCCCCCcEEEEeCCcCCCceEEEEECCCCeEEEEEEeccccc--cCCCCHHHHHHHHHH
Confidence 11 11111 222222221 122233344554 366788888998887666555443211 111122223333333
Q ss_pred CCChHHHHHHHcCCccceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCC
Q 010723 167 GWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESK 246 (502)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~ 246 (502)
+.+.+. ...........+.......+|..+|++|+|||||.++|++|||+|+|++||..|+++|.+++..+
T Consensus 248 -~~~~~~----~~~~~~~~~~~~p~~~~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~---- 318 (397)
T 3cgv_A 248 -NHPGLK----KGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESN---- 318 (397)
T ss_dssp -TCHHHH----TSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHT----
T ss_pred -hCcCCC----CCeEEeeeeeeeecCCCccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC----
Confidence 233221 11111112222222244668899999999999999999999999999999999999999887543
Q ss_pred ChhhHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 010723 247 TPIDIVSALKSYERARRLRVAVIHGLARSAAV 278 (502)
Q Consensus 247 ~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~ 278 (502)
.....+|+.|+++|+++....+..++....
T Consensus 319 --~~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~ 348 (397)
T 3cgv_A 319 --DYSPQMMQKYEKLIKERFERKHLRNWVAKE 348 (397)
T ss_dssp --CCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234688999999999988877776665443
No 21
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.88 E-value=5.4e-22 Score=210.32 Aligned_cols=249 Identities=13% Similarity=0.137 Sum_probs=168.8
Q ss_pred CCCeEEEeeHHHHHHHHHhcc--CCCeEecCCeEEEEEee-CCeEEEEEc-cC--cEEEeeEEEEecCCCchhhccccCC
Q 010723 18 GLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDH-GDKVSVVLE-NG--QCYAGDLLIGADGIWSKVRKNLFGP 91 (502)
Q Consensus 18 ~~p~~~~i~R~~L~~~L~~~~--~~~~v~~~~~v~~i~~~-~~~v~v~~~-dg--~~~~adlvVgADG~~S~vR~~l~~~ 91 (502)
..+.++.++|..|.+.|.+.+ ..+.++++++|++++.+ ++.+.|++. +| .+++||+||+|||.+|.+|+.+...
T Consensus 118 ~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr~~lg~~ 197 (591)
T 3i3l_A 118 VFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKLGVR 197 (591)
T ss_dssp CCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGCHHHHHHTCE
T ss_pred ccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcchhHHHcCCC
Confidence 456799999999999999877 34679999999999875 566788887 67 5799999999999999999987322
Q ss_pred -CCCcccceEEEEEEecC---CCCCccccceEEEecCceEEEEEeCCCCeEEEEEEEcCCCCCCCCCcchHHHHHHHhhC
Q 010723 92 -QEAIYSGYTCYTGIADF---VPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEG 167 (502)
Q Consensus 92 -~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 167 (502)
....+.+ .++...... .+.+..... .....++++++.+|..++.+.+.+........ .......+.+.+.+..
T Consensus 198 ~~~~~~~~-~av~~~~~~~~~~~~~~~~~~-~~~~~~~G~~w~iPl~~~~~sv~~~~~~~~~~-~l~~~~~~~~~~~l~~ 274 (591)
T 3i3l_A 198 QYDEFYRN-FAVWSYFKLKDPFEGDLKGTT-YSITFEDGWVWMIPIKDDLYSVGLVVDRSKSA-EVREQGADAFYSSTLA 274 (591)
T ss_dssp EEEEEEEE-EEEEEEEECCCSCCSTTTTCE-EEEEETTEEEEEEECSSSEEEEEEEEEGGGHH-HHHHHCHHHHHHHHHT
T ss_pred CCCccccc-eEEEEEEecCccccCCCCCce-EEEEcCCcEEEEEECCCCeEEEEEEcCHHHHh-hhccCCHHHHHHHHHH
Confidence 1222333 222222211 112222222 23344667788889988876665544321100 0001123445555556
Q ss_pred CChHHHHHHHcCCccc-eeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCC
Q 010723 168 WCDNVVDLILATDEEA-ILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESK 246 (502)
Q Consensus 168 ~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~ 246 (502)
+.+.+...+....... ....+... ....+|..+|++|||||||.++|+.|||+|+|++||..|+++|...+..+
T Consensus 275 ~~p~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~~---- 349 (591)
T 3i3l_A 275 KCAKAMDILGGAEQVDEVRIVQDWS-YDTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHG---- 349 (591)
T ss_dssp TCHHHHHHHTTCEECSCCEEEEEEE-EEESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHCG----
T ss_pred hCHHHHHHHhcCccccCceEecccc-cchhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhCC----
Confidence 6777766665432111 11111111 12457889999999999999999999999999999999999999887642
Q ss_pred ChhhHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 010723 247 TPIDIVSALKSYERARRLRVAVIHGLARSA 276 (502)
Q Consensus 247 ~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~ 276 (502)
.....+++.|++.|+++...++++....
T Consensus 350 --~~~~~al~~Y~~~~~~~~~~i~~~~~~~ 377 (591)
T 3i3l_A 350 --DEKDAVHAWYNRTYREAYEQYHQFLASF 377 (591)
T ss_dssp --GGHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4557899999999999999888777653
No 22
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.86 E-value=1.1e-20 Score=200.63 Aligned_cols=238 Identities=12% Similarity=0.003 Sum_probs=148.3
Q ss_pred EEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCC-eEE-EEEc------cC---------cEEEeeEEEEecCCCc
Q 010723 22 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGD-KVS-VVLE------NG---------QCYAGDLLIGADGIWS 82 (502)
Q Consensus 22 ~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~-~v~-v~~~------dg---------~~~~adlvVgADG~~S 82 (502)
.+.++|..|.+.|.+++. .+.++++++|+++..+++ .|. |++. +| .+++||+||+|||.+|
T Consensus 138 ~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 138 NYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp CEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred CEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 689999999999998874 467999999999998764 454 6665 33 6899999999999999
Q ss_pred hhhcccc---CCC---CCcccceEEEEEEecCCCCCccccceEEEec------CceEEEEEeCC--CCeEEEEEEEcCCC
Q 010723 83 KVRKNLF---GPQ---EAIYSGYTCYTGIADFVPADIESVGYRVFLG------HKQYFVSSDVG--AGKMQWYAFHKEPA 148 (502)
Q Consensus 83 ~vR~~l~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~p~~--~~~~~~~~~~~~~~ 148 (502)
.+|+.+. +.. .+.+.+ ..+..+...............+++ ..+..++++.. ++.+.+.+......
T Consensus 218 ~vr~~l~~~~gl~~~~~p~~~g-~g~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~ 296 (584)
T 2gmh_A 218 HLAKQLYKKFDLRANCEPQTYG-IGLKELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDY 296 (584)
T ss_dssp HHHHHHHHHTTTTTTSCCCCEE-EEEEEEEECCGGGCCTTEEEEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEETTC
T ss_pred hHHHHHHHHhCCCCCCCchhHH-hhhhhheecCcccccCCeEEEEEeccccCCcCCceEEEEecCCCCeEEEEEEEecCc
Confidence 9999872 222 122222 122222211111111212222221 11223445666 67776665544321
Q ss_pred CCCCCCcchHHHHHHHhhCCChHHHHHHHcCCccceeeeeccc--CCCCCcccCCCEEEEcCCccccCCCchhhhhHHHH
Q 010723 149 GGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYD--RTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIE 226 (502)
Q Consensus 149 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~ 226 (502)
... .....+.+.++.. .+.+.+.+...+...+....++. ....++|..+|++|||||||.++|+.|||+|+||+
T Consensus 297 ~~~--~~~~~~~l~~~~~--~p~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~ 372 (584)
T 2gmh_A 297 QNP--YLSPFREFQRWKH--HPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMK 372 (584)
T ss_dssp CCT--TCCHHHHHHHHTT--STTTHHHHTTCEEEEEEEEEEECCGGGGCCCCEETTEEECTTTTCCCBTTTTBCHHHHHH
T ss_pred ccc--cCChHHHHHHHHh--ChHHHHHhCCCeEEEecceEccCCCcccCCccccCCEEEEcccccccCccccccHHHHHH
Confidence 111 1123445544433 35566666433221111112221 23456899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCChhhHHHH---HHHHHHHhHHH-HHHH
Q 010723 227 DGYQLAVELEKACKKSNESKTPIDIVSA---LKSYERARRLR-VAVI 269 (502)
Q Consensus 227 Da~~La~~L~~~~~~~~~~~~~~~~~~~---L~~Y~~~R~~~-~~~~ 269 (502)
||..||++|..+++.+ . ....++ |+.|+++|+++ +...
T Consensus 373 da~~LA~~L~~~~~~g----~-~~~~~a~~~L~~Ye~~r~~~~v~~~ 414 (584)
T 2gmh_A 373 SGTLAAESIFNQLTSE----N-LQSKTIGLHVTEYEDNLKNSWVWKE 414 (584)
T ss_dssp HHHHHHHHHHHHHTCC----C-CCCSSSSCCCTHHHHHHHTSHHHHH
T ss_pred HHHHHHHHHHHHHHcC----C-cchhhhhhhHHHHHHHHHHhHHHHH
Confidence 9999999999987532 0 011343 89999999987 4443
No 23
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.85 E-value=3.3e-20 Score=189.82 Aligned_cols=242 Identities=14% Similarity=0.082 Sum_probs=157.9
Q ss_pred CCCeEEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeE--EEEEccCc--EEEeeEEEEecCCCchhhcccc-C
Q 010723 18 GLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKV--SVVLENGQ--CYAGDLLIGADGIWSKVRKNLF-G 90 (502)
Q Consensus 18 ~~p~~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v--~v~~~dg~--~~~adlvVgADG~~S~vR~~l~-~ 90 (502)
..+.++.++|..|.+.|.+.+. .++++++++|++++.+++++ .+...+|+ +++||+||+|||.+|.+|+.+. .
T Consensus 96 ~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g~~ 175 (421)
T 3nix_A 96 GWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFGLD 175 (421)
T ss_dssp SCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTTCE
T ss_pred CCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcCCC
Confidence 3567899999999999998763 46799999999999887765 45557887 7999999999999999999873 2
Q ss_pred CCCCcccceEEEEEEec-CCC-CCccccceEEEe---cCceEEEEEeCCCCeEEEEEEEcCCCCCCCCCcchHHHHHHHh
Q 010723 91 PQEAIYSGYTCYTGIAD-FVP-ADIESVGYRVFL---GHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIF 165 (502)
Q Consensus 91 ~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 165 (502)
.....+.. .+++.... ..+ ...+.....++. .++.+++.+|.+++...+.+....... .... ...+++++.+
T Consensus 176 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~-~~~~-~~~~~~l~~~ 252 (421)
T 3nix_A 176 KPSGFESR-RTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFVGEPSYF-DEYT-GTPEERMRAM 252 (421)
T ss_dssp ECCSSCCC-EEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEEECHHHH-TTSC-SCHHHHHHHH
T ss_pred CCCcCCCc-EEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEEecHHHh-hhcC-CCHHHHHHHH
Confidence 22223333 33333322 111 111111222222 256788888998888766554432110 0111 1233344444
Q ss_pred hCCChHHHHHHHcCCcc-ceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCC
Q 010723 166 EGWCDNVVDLILATDEE-AILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNE 244 (502)
Q Consensus 166 ~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~ 244 (502)
..+.+.+.+.+...... .+..++.+. ....+|..++++|||||||.++|+.|||+|+|++||..|+++|.+.+.++
T Consensus 253 ~~~~p~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~-- 329 (421)
T 3nix_A 253 IANEGHIAERFKSEEFLFEPRTIEGYA-ISASKLYGDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGE-- 329 (421)
T ss_dssp HHTCTTTHHHHTTCCBSSCCEEEECCC-BEESCSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred HHhCcHHHHHHhcCccccCceeecccc-eeeeeeccCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcCC--
Confidence 44556666666544322 112222222 23457788999999999999999999999999999999999999987652
Q ss_pred CCChhhHHHHHHHHHHHhHHHHHHHHH
Q 010723 245 SKTPIDIVSALKSYERARRLRVAVIHG 271 (502)
Q Consensus 245 ~~~~~~~~~~L~~Y~~~R~~~~~~~~~ 271 (502)
. ...++.|++.++.....+..
T Consensus 330 ---~---~~~~~~y~~~~~~~~~~~~~ 350 (421)
T 3nix_A 330 ---E---VNWEKDFVEHMMQGIDTFRS 350 (421)
T ss_dssp ---C---CCHHHHTHHHHHHHHHHHHH
T ss_pred ---c---hhHHHHHHHHHHHHHHHHHH
Confidence 1 13567888888776654433
No 24
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=99.83 E-value=1e-20 Score=158.86 Aligned_cols=100 Identities=24% Similarity=0.401 Sum_probs=80.1
Q ss_pred CcEEEEecCCCCCcccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEE-----------eCCeEEEEE
Q 010723 366 GEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISY-----------KDGAFYLID 434 (502)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~-----------~~~~~~i~d 434 (502)
..|.|....++. ..+.+.|. .+..++|||.+.|| |+|++++|||+||+|.+ .++.|+|+|
T Consensus 19 ~~~~L~v~k~g~-~~~~~~L~---~~~~~~IGR~~~~d-----i~l~~~~VSr~HA~I~~r~~~~~~~~~~~~~~~~l~D 89 (130)
T 4h87_A 19 APYSLETLKGGT-ILGTRSLK---GTSYCLFGRLSGCD-----VCLEHPSVSRYHAVLQHRASGPDGECDSNGPGFYLYD 89 (130)
T ss_dssp SCCEEEEEETTE-EEEEEECT---TCSEEEEESSTTSS-----EECCCTTSCSSCEEEEEBCCCCCC------CCEEEEE
T ss_pred CCEEEEEEECCe-eeeeEEeC---CCceEEEcCCcCCC-----EEeCCCCcchhcEEEEEecccCccceeccCCcceEee
Confidence 457776665442 22567776 23448999999888 99999999999999964 356799999
Q ss_pred cCCccceeecCCCCceeecCCCCcEEeCCCCEEEeCCCceEEEEEE
Q 010723 435 LQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK 480 (502)
Q Consensus 435 ~~s~nGt~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~ 480 (502)
|+|+|||||||. +|.++.++.|++||+|+||..+. .|+++
T Consensus 90 l~StNGT~vNg~-----ri~~~~~~~L~~GD~I~~G~str-~yvl~ 129 (130)
T 4h87_A 90 LGSTHGTFLNKT-----RIPPRTYCRVHVGHVVRFGGSTR-LFILQ 129 (130)
T ss_dssp CSCSSCEEETTE-----ECCTTCCEECCTTCEEEETTCSE-EEEEE
T ss_pred CCCCCceEECCE-----ECCCCceeECCCCCEEEECCceE-EEEEc
Confidence 999999999999 99999999999999999999843 56553
No 25
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.83 E-value=2.4e-19 Score=188.69 Aligned_cols=234 Identities=9% Similarity=0.001 Sum_probs=147.1
Q ss_pred CCeEEEeeHHHHHHHHHhccC---CCeEecCCeEEEEEeeCCe--EEEEEccCcEEEeeEEEEecCCCchhhccccCCCC
Q 010723 19 LPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLIGADGIWSKVRKNLFGPQE 93 (502)
Q Consensus 19 ~p~~~~i~R~~L~~~L~~~~~---~~~v~~~~~v~~i~~~~~~--v~v~~~dg~~~~adlvVgADG~~S~vR~~l~~~~~ 93 (502)
.+.++.++|..|.+.|.+.+. .+.++++ +|++++.++++ +.|++.+|.+++||+||+|||.+|.+|+..++...
T Consensus 166 ~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~~ 244 (526)
T 2pyx_A 166 NNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVPF 244 (526)
T ss_dssp SCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCCE
T ss_pred CCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCc
Confidence 356899999999999998763 4678888 69999887554 46778888889999999999999999544433221
Q ss_pred Cc----ccceEEEEEEecCCC--CCccccceEEEecCceEEEEEeCCCCeEEEEEEEcCCCCCCCCCcchHHHHHHHhhC
Q 010723 94 AI----YSGYTCYTGIADFVP--ADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEG 167 (502)
Q Consensus 94 ~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 167 (502)
.. +....++........ ...... ......+.++++.+|..+.....+.+ ... . . ......+.+.+.+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~pl~~~~~~~~v~-~~~-~-~-~~~~~~~~l~~~l~~ 319 (526)
T 2pyx_A 245 LSQKSVLFNDRALAIQVPYSDANSPIASC-THSTAQPNGWIWDIGLPTRKGVGYVY-SSS-H-T-NDIDAQKTLFNYLGV 319 (526)
T ss_dssp EECHHHHCCCEEEEEEEECSSTTCCCCSS-EEEEEETTEEEEEEECSSEEEEEEEE-CTT-T-C-CHHHHHHHHHHHHTC
T ss_pred ccccccccCccEEEEEeeccCCCCCCCCc-eeEEecCCCeEEEeeCCCceEEEEEe-cCC-C-C-ChHHHHHHHHHHHHh
Confidence 11 111122222222111 111111 12223355677777887643332222 111 1 1 112234455666655
Q ss_pred CChHHHHHHHcCCccceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCCC
Q 010723 168 WCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKT 247 (502)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~ 247 (502)
+.+. +...+. ..+++.. ....+|..+||+|||||||.++|+.|||+|+|++||..|+++|...
T Consensus 320 ~~~~----l~~~~~---~~~~~~~-~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~~--------- 382 (526)
T 2pyx_A 320 DGAA----ADKLEP---RQLAINP-GYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPPN--------- 382 (526)
T ss_dssp CHHH----HHHCCC---EEEECCC-EEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCSC---------
T ss_pred cCcc----cccCCc---eEEeccc-CccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhhc---------
Confidence 5322 221221 1122221 1245677899999999999999999999999999999999887531
Q ss_pred hhhHHHHHHHHHHHhHHHHHHHHHHHHH
Q 010723 248 PIDIVSALKSYERARRLRVAVIHGLARS 275 (502)
Q Consensus 248 ~~~~~~~L~~Y~~~R~~~~~~~~~~s~~ 275 (502)
....+.+|+.|+++|+++...+.++...
T Consensus 383 ~~~~~~~l~~Y~~~~~~~~~~~~~~~~~ 410 (526)
T 2pyx_A 383 RMVMDTISARVNERYQQHWQQIIDFLKL 410 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1345689999999999999877665443
No 26
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=99.83 E-value=3.8e-20 Score=155.64 Aligned_cols=101 Identities=21% Similarity=0.237 Sum_probs=84.2
Q ss_pred EEEecCCCCCcccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEEe--CCeEEEEEcCCccceeecCC
Q 010723 369 FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVTDN 446 (502)
Q Consensus 369 ~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~~~~~i~d~~s~nGt~vn~~ 446 (502)
.|....+....++.+.|. .+.++|||.++|+ |+++++.|||.||+|.++ ++.|+|+|++|+|||||||.
T Consensus 26 ~L~v~~g~~~~g~~~~L~----~~~~~IGR~~~~d-----i~l~d~~VSr~HA~i~~~~~~~~~~l~Dl~S~NGT~vNg~ 96 (132)
T 3va4_A 26 QLRLFSGTHGPERDFPLY----LGKNVVGRSPDCS-----VALPFPSISKQHAVIEISAWNKAPILQDCGSLNGTQIVKP 96 (132)
T ss_dssp EEEECCBTTBSCEEEEEC----SEEEEEESSTTSS-----EECCCTTSCTTCEEEEECSTTSCCEEEECSCSSCEEETTT
T ss_pred EEEEEeCCCCCceEEEEC----CCCEEEccCCCCC-----EEeCCCCcChhHEEEEEEcCCCEEEEEECCCCCCeEECCE
Confidence 344433332344889999 5559999999888 999999999999999997 68899999999999999998
Q ss_pred CCceee--cCCCCcEEeCCCCEEEeCCCceEEEEEEEeccCC
Q 010723 447 EGRRYR--VSSNFPARFRPSDTIEFGSDKKAIFRVKVIGTPP 486 (502)
Q Consensus 447 ~~~~~~--~~~~~~~~l~~gd~i~~g~~~~~~~~~~~~~~~~ 486 (502)
+ |.++.+..|++||+|+||+. .|+|.....||
T Consensus 97 -----~i~l~~~~~~~L~~GD~I~lG~~---~l~f~~~~~p~ 130 (132)
T 3va4_A 97 -----PRVLPPGVSHRLRDQELILFADF---PCQYHRLDVPP 130 (132)
T ss_dssp -----TEEECTTCCEECCTTCEEEETTE---EEEEEECCCCC
T ss_pred -----EcccCCCCEEECCCCCEEEECCE---EEEEEECCCCC
Confidence 6 78888999999999999998 77777765554
No 27
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.82 E-value=4.7e-19 Score=185.96 Aligned_cols=229 Identities=10% Similarity=-0.034 Sum_probs=144.7
Q ss_pred CCeEEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCe--EEEEEccCcEEEeeEEEEecCCCchhhccccCCCC-
Q 010723 19 LPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLIGADGIWSKVRKNLFGPQE- 93 (502)
Q Consensus 19 ~p~~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~--v~v~~~dg~~~~adlvVgADG~~S~vR~~l~~~~~- 93 (502)
.+.++.++|..|.+.|.+.+. .+.++++ +|++++.++++ +.|++.+|++++||+||+|||.+|.+|+.+++...
T Consensus 164 ~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~~~ 242 (511)
T 2weu_A 164 FPYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGRFQ 242 (511)
T ss_dssp CSCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCCCEE
T ss_pred CCeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCCc
Confidence 456899999999999999763 4678888 99999986555 67888899899999999999999999765533221
Q ss_pred ----CcccceEEEEEEecCC-CCCccccceEEEecCceEEEEEeCCCCeEEEEEEEcCCCCCCCCCcchHHHHHHHhhCC
Q 010723 94 ----AIYSGYTCYTGIADFV-PADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGW 168 (502)
Q Consensus 94 ----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 168 (502)
..+.. .++....... +...... ......++++++.+|..+ ...+.+..... . ..++...+.+.+.+ .+
T Consensus 243 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~P~~~-~~~~g~~~~~~--~-~~~~~~~~~l~~~~-~~ 315 (511)
T 2weu_A 243 SFSDVLPNN-RAVALRVPRENDEDMRPY-TTATAMSAGWMWTIPLFK-RDGNGYVYSDE--F-ISPEEAERELRSTV-AP 315 (511)
T ss_dssp ECTTTCCCC-EEEEEEEECSSGGGCCSS-EEEEEETTEEEEEEECSS-EEEEEEEECTT--T-SCHHHHHHHHHHHH-CT
T ss_pred cccccCccc-ceEEEEeccCCCCCCCcc-eeceecCCCcEEEEECCC-ceEEEEEECCC--C-CCHHHHHHHHHHHh-Cc
Confidence 11222 2222112111 1001111 122334556777788876 33332222211 1 11112223334333 22
Q ss_pred ChHHHHHHHcCCccceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCCCh
Q 010723 169 CDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTP 248 (502)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~ 248 (502)
.+.+ ...... ++.. ...++|..+||+|||||||.++|+.|||+|+|++||..|+++|...
T Consensus 316 ~~~~-------~~~~~~--~~~~-~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~~---------- 375 (511)
T 2weu_A 316 GRDD-------LEANHI--QMRI-GRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPGE---------- 375 (511)
T ss_dssp TCTT-------SCCEEE--ECCC-EEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCCT----------
T ss_pred cccc-------ccceeE--Eeec-cccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhccC----------
Confidence 2111 111111 1111 1234667899999999999999999999999999999999987531
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHHHH
Q 010723 249 IDIVSALKSYERARRLRVAVIHGLARS 275 (502)
Q Consensus 249 ~~~~~~L~~Y~~~R~~~~~~~~~~s~~ 275 (502)
...+.+|+.|+++|+++...+..+...
T Consensus 376 ~~~~~~l~~Y~~~~~~~~~~~~~~~~~ 402 (511)
T 2weu_A 376 RWDPVLISAYNERMAHMVDGVKEFLVL 402 (511)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223678999999999999877665543
No 28
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.80 E-value=5.2e-19 Score=186.66 Aligned_cols=228 Identities=9% Similarity=-0.013 Sum_probs=143.8
Q ss_pred CCeEEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCe--EEEEEccCcEEEeeEEEEecCCCchhhccccCCCCC
Q 010723 19 LPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLIGADGIWSKVRKNLFGPQEA 94 (502)
Q Consensus 19 ~p~~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~--v~v~~~dg~~~~adlvVgADG~~S~vR~~l~~~~~~ 94 (502)
.+.++.++|..|.+.|.+.+. .+.++++ +|++++.++++ +.|++.+|++++||+||+|||.+|.+|+.+++....
T Consensus 156 ~~~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~ 234 (538)
T 2aqj_A 156 MSHAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFI 234 (538)
T ss_dssp SCCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEE
T ss_pred CCccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCcc
Confidence 467899999999999998763 4678888 89999886553 578888998999999999999999997766443211
Q ss_pred ccc----ceEEEEEEecCCCC--CccccceEEEecCceEEEEEeCCCCeEEEEEEEcCCCCCCCCCcchHHHHHHHhhCC
Q 010723 95 IYS----GYTCYTGIADFVPA--DIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGW 168 (502)
Q Consensus 95 ~~~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 168 (502)
.+. ...++......... ..... ......+.++++.+|..+.. .+.+.+... ...+....+.+.+.+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~p~~~~~-~~g~v~~~~---~~~~~~~~~~l~~~~~~~ 309 (538)
T 2aqj_A 235 DMSDYLLCDSAVASAVPNDDARDGVEPY-TSSIAMNSGWTWKIPMLGRF-GSGYVFSSH---FTSRDQATADFLKLWGLS 309 (538)
T ss_dssp ECTTTCCCCEEEEEEEECCHHHHCCCSS-EEEEECSSEEEEEEEETTEE-EEEEEECTT---TSCHHHHHHHHHHHHTCC
T ss_pred ccccccccceEEEEecccCCcccCCCCc-eeeeecCCceEEEecCCCce-EEEEEEcCC---CCChHHHHHHHHHHhcCC
Confidence 111 11222222211100 01111 12233455677777887643 222222211 111122233444444331
Q ss_pred ChHHHHHHHcCCccceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCCCh
Q 010723 169 CDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTP 248 (502)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~~ 248 (502)
+ + ... .. .++.. ....+|..+||+|||||||.++|+.|||+|+|++||..|+++|...
T Consensus 310 -~-~------~~~-~~--~~~~~-~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~~---------- 367 (538)
T 2aqj_A 310 -D-N------QPL-NQ--IKFRV-GRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPDT---------- 367 (538)
T ss_dssp -T-T------CCC-EE--EECCC-EEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCBT----------
T ss_pred -C-C------CCc-eE--Eeecc-ccccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhcc----------
Confidence 1 1 111 11 12211 1235677899999999999999999999999999999999877521
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHHH
Q 010723 249 IDIVSALKSYERARRLRVAVIHGLAR 274 (502)
Q Consensus 249 ~~~~~~L~~Y~~~R~~~~~~~~~~s~ 274 (502)
...+.+|+.|+++|+++...+..+..
T Consensus 368 ~~~~~~l~~Y~~~~~~~~~~~~~~~~ 393 (538)
T 2aqj_A 368 SFDPRLSDAFNAEIVHMFDDCRDFVQ 393 (538)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23367899999999999877655443
No 29
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=99.80 E-value=4.3e-19 Score=144.30 Aligned_cols=98 Identities=22% Similarity=0.452 Sum_probs=80.8
Q ss_pred CCcEEEEecCCCCCcccceEEeecCCCCCEEEcCCC-CCCCCCceeeeCCccccccceEEEEe-CCeEEEEEcCCcccee
Q 010723 365 NGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSES-HEDFSRTSIVIPSAQVSKMHARISYK-DGAFYLIDLQSEHGTY 442 (502)
Q Consensus 365 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~-~~~~~~~~i~~~~~~vSr~Ha~i~~~-~~~~~i~d~~s~nGt~ 442 (502)
.+.|.|....+.. .++.+.|. . +..++|||.+ .|+ |+++++.|||.||+|.++ ++.|+|+|++|+||||
T Consensus 2 ~~~~~L~v~~G~~-~g~~~~l~-~--~~~~~iGR~~~~~d-----i~l~d~~vSr~Ha~i~~~~~~~~~l~Dl~S~nGt~ 72 (106)
T 3gqs_A 2 PSRFLLKVLAGAN-IGAEFHLD-S--GKTYIVGSDPQVAD-----IVLSDMSISRQHAKIIIGNDNSVLIEDLGSKNGVI 72 (106)
T ss_dssp -CEEEEEECC-CC-TTCEEEEC-T--TCEEEEESCTTTCS-----EECCCTTSCSSCEEEEECTTSCEEEEECSCSSCCE
T ss_pred CceEEEEEEeCCC-CcEEEEEC-C--CCEEEEeECCCcCC-----EEeCCCCcchhhcEEEECCCCcEEEEECcCCCCeE
Confidence 4578887765432 34889998 2 2348999999 677 999999999999999999 7889999999999999
Q ss_pred ecCCCCceeecCCCCcEEeCCCCEEEeCCCceEEEEEEE
Q 010723 443 VTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 481 (502)
Q Consensus 443 vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~ 481 (502)
|||+ ++.+ +..|++||+|+||.. .|+|.-
T Consensus 73 vng~-----~i~~--~~~L~~Gd~i~~G~~---~~~~~~ 101 (106)
T 3gqs_A 73 VEGR-----KIEH--QSTLSANQVVALGTT---LFLLVD 101 (106)
T ss_dssp ETTE-----ECSS--EEECCTTCCEEETTE---EEEEEE
T ss_pred ECCE-----ECCC--CeECCCCCEEEECCE---EEEEEc
Confidence 9999 8874 579999999999998 566654
No 30
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=99.79 E-value=1.6e-19 Score=156.40 Aligned_cols=100 Identities=22% Similarity=0.306 Sum_probs=81.8
Q ss_pred CCcEEEEecCCCCC---cccceEEeecCCCCCEEEcCCCC----------CCCCCceeeeCCccccccceEEEEeCCe--
Q 010723 365 NGEWFLVPSGSENV---VSQPIYLSVSHENEPYLIGSESH----------EDFSRTSIVIPSAQVSKMHARISYKDGA-- 429 (502)
Q Consensus 365 ~~~~~l~~~~~~~~---~~~~~~l~~~~~~~~~~iGR~~~----------~~~~~~~i~~~~~~vSr~Ha~i~~~~~~-- 429 (502)
...|.|....++.. ..+.+.|. .+..++|||.+. |+...|||++++++|||.||+|.+.++.
T Consensus 29 ~~~~~l~v~k~g~~~~~~~~~~~L~---~~~~~~IGR~~~~~~~~~~~~~n~~~~~Di~l~~~~VSr~HA~I~~~~~~~~ 105 (158)
T 3els_A 29 RTMYELVIYRKNDKDKGPWKRYDLN---GRSCYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGI 105 (158)
T ss_dssp SCCEEEEEEEGGGGGGCCSEEEECS---SCSEEEEEECCCC---------CCCCCCSEEECCTTSCSSCEEEEEEEETTE
T ss_pred CCceEEEEEeCCccCcccceEEEec---CCCceEeccccccccccccccccccccCCEEcCCCCCCcccEEEEEEccCCe
Confidence 46788888754431 33567777 345599999963 4444578999999999999999988554
Q ss_pred --EEEEEcCCccceeecCCCCceeecCCCCcEEeCCCCEEEeCCC
Q 010723 430 --FYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 472 (502)
Q Consensus 430 --~~i~d~~s~nGt~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~ 472 (502)
|+|+|++|+|||||||. ++.++.+++|++||+|+||..
T Consensus 106 ~~~~l~Dl~StNGT~VNg~-----ri~~~~~~~L~~GD~I~~G~s 145 (158)
T 3els_A 106 LKCYVMDLDSSNGTCLNNV-----VIPGARYIELRSGDVLTLSEF 145 (158)
T ss_dssp EEEEEEECSCSSCCEETTE-----ECCTTCCEECCTTEEEESSSC
T ss_pred eEEEEEeCCCCCccEECCE-----EcCCCceEEcCCCCEEEECCC
Confidence 99999999999999999 999988999999999999975
No 31
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.79 E-value=8.1e-19 Score=145.72 Aligned_cols=93 Identities=22% Similarity=0.295 Sum_probs=79.0
Q ss_pred CcEEEEecCCCCCcccceEEeecCCCCCEEEcCC-CCCCCCCceeeeCCccccccceEEEEeCCeEEEEEcCCccceeec
Q 010723 366 GEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSE-SHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVT 444 (502)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~-~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~d~~s~nGt~vn 444 (502)
+.|.|....+. ..++.+.|. . +..++|||. +.|+ |+++++.|||.||+|.++++.|+|+|++|+||||||
T Consensus 11 p~l~L~v~~g~-~~g~~~~l~-~--~~~~~iGR~~~~~d-----i~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGT~vn 81 (118)
T 1uht_A 11 PSLRLVFVKGP-REGDALDYK-P--GSTIRVGRIVRGNE-----IAIKDAGISTKHLRIESDSGNWVIQDLGSSNGTLLN 81 (118)
T ss_dssp CEEEEEESSST-TTTCBCCBC-T--TCCEEEESSSTTCS-----EECCSSSSCTTCEEEEECSSSEEEECCCCSSCCEES
T ss_pred CeEEEEEEeCC-CCCcEEEEC-C--CCEEEEcCCCCCCC-----EEeCCCCCchHHeEEEEECCEEEEEECCCCCCeEEC
Confidence 45556555432 233788887 2 245999999 6777 999999999999999999999999999999999999
Q ss_pred CCCCceeecCCCCcEEeCCCCEEEeCCC
Q 010723 445 DNEGRRYRVSSNFPARFRPSDTIEFGSD 472 (502)
Q Consensus 445 ~~~~~~~~~~~~~~~~l~~gd~i~~g~~ 472 (502)
+. ++.++.+..|++||+|+||..
T Consensus 82 g~-----~l~~~~~~~L~~gd~i~lG~~ 104 (118)
T 1uht_A 82 SN-----ALDPETSVNLGDGDVIKLGEY 104 (118)
T ss_dssp SS-----BCCTTCEEECCTTEEEEETTT
T ss_pred CE-----ECCCCCeEEcCCCCEEEECCe
Confidence 99 999888999999999999998
No 32
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=99.78 E-value=7.2e-19 Score=149.98 Aligned_cols=101 Identities=24% Similarity=0.350 Sum_probs=83.5
Q ss_pred hhhhccCCcEEEEec-CCCCCcccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEEeCCeEEEEEcCC
Q 010723 359 ALERAMNGEWFLVPS-GSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQS 437 (502)
Q Consensus 359 ~le~~~~~~~~l~~~-~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~d~~s 437 (502)
+.+......|.|+.. +...+ ..+.|. ...++|||.+.|+ |+++++.|||+||+|.++++.|+|+|++|
T Consensus 38 ~~~~~p~~~~~L~v~~G~~~g--~~~~L~----~~~~~IGR~~~~d-----i~l~d~~VSr~Ha~I~~~~~~~~l~DlgS 106 (143)
T 2kb3_A 38 GAENLPAGSALLVVKRGPNAG--ARFLLD----QPTTTAGRHPESD-----IFLDDVTVSRRHAEFRINEGEFEVVDVGS 106 (143)
T ss_dssp CTTTCSSSCEEEEEEESTTTT--CEEEEC----SSEEEESSCTTCS-----BCCCCSSCCSSSEEEEEETTEEEEEESCC
T ss_pred ccccCCCccEEEEEEeCCCCC--eEEEeC----CCCeeccCCCCCC-----EEeCCCCcChhhEEEEEECCEEEEEECCC
Confidence 334444556666665 43333 889998 5569999999888 99999999999999999999999999999
Q ss_pred ccceeecCCCCceeecCCCCcEEeCCCCEEEeCCCceEEEEEEE
Q 010723 438 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 481 (502)
Q Consensus 438 ~nGt~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~ 481 (502)
+|||||||. ++. +..|++||+|+||.. .|+|..
T Consensus 107 ~NGT~VNg~-----~i~---~~~L~~GD~I~iG~~---~l~f~~ 139 (143)
T 2kb3_A 107 LNGTYVNRE-----PRN---AQVMQTGDEIQIGKF---RLVFLA 139 (143)
T ss_dssp SSCCEETTE-----ECS---EEECCTTEEEEETTE---EEEEEE
T ss_pred cCCeEECCE-----Ecc---eEECCCCCEEEECCE---EEEEEe
Confidence 999999999 886 689999999999997 565554
No 33
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=99.78 E-value=7e-19 Score=149.99 Aligned_cols=105 Identities=18% Similarity=0.262 Sum_probs=87.5
Q ss_pred hccCCcEEEEecCCCCCcccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCcc----ccccceEEEE-eCCeEEEEEcC
Q 010723 362 RAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ----VSKMHARISY-KDGAFYLIDLQ 436 (502)
Q Consensus 362 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~----vSr~Ha~i~~-~~~~~~i~d~~ 436 (502)
++....|.|...|... ..+.|. .+..++|||.+.|+ |+++++. |||.||+|.+ .++.|+|+|++
T Consensus 4 ~~~~~~w~l~~~G~~~---~~~~l~---~~~~~~IGR~~~~d-----i~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~ 72 (138)
T 2pie_A 4 MAGGRSWCLRRVGMSA---GWLLLE---DGCEVTVGRGFGVT-----YQLVSKICPLMISRNHCVLKQNPEGQWTIMDNK 72 (138)
T ss_dssp GGGCEEEEEEETTCSS---CBEEEC---TTCCEEEESSSSSS-----EECCCSSCTTSSCSSCEEEEECTTSCEEEEECS
T ss_pred CCCCccEEEEEeCCCC---CEEEec---CCCeEEECCCCCCC-----EEeCCCCcCCCCChhHeEEEEcCCCcEEEEECC
Confidence 4556779999887553 467775 24459999999888 9999998 9999999999 58889999999
Q ss_pred CccceeecCCCCceeecCCCCcEEeCCCCEEEeCCC----ceEEEEEEEe
Q 010723 437 SEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD----KKAIFRVKVI 482 (502)
Q Consensus 437 s~nGt~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~----~~~~~~~~~~ 482 (502)
|+|||||||. ++.++.+..|++||+|.||.. ..+.|.+...
T Consensus 73 S~NGT~vNg~-----~l~~~~~~~L~~GD~I~lG~~~~~~~~~~f~~~~~ 117 (138)
T 2pie_A 73 SLNGVWLNRA-----RLEPLRVYSIHQGDYIQLGVPLENKENAEYEYEVT 117 (138)
T ss_dssp CSSCEEETTE-----ECCTTCCEECCTTCEEEESCCCTTCSSCSEEEEEE
T ss_pred CCCCeEECCE-----EcCCCCcEECCCCCEEEECCCCCCCceEEEEEEec
Confidence 9999999999 999988999999999999983 3456666553
No 34
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=99.78 E-value=8.3e-19 Score=141.10 Aligned_cols=83 Identities=24% Similarity=0.373 Sum_probs=74.1
Q ss_pred ccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEEeCCeEEEEEcCCccceeecCCCCceeecCCCCcE
Q 010723 380 SQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPA 459 (502)
Q Consensus 380 ~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~d~~s~nGt~vn~~~~~~~~~~~~~~~ 459 (502)
++.++|. ...++|||.++|+ |+++++.|||.||+|.++++.|+|+|++|+|||||||. ++. +.
T Consensus 15 g~~~~l~----~~~~~IGR~~~~d-----i~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~-----~i~---~~ 77 (100)
T 3po8_A 15 GRTYQLR----EGSNIIGRGQDAQ-----FRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNA-----PVQ---EW 77 (100)
T ss_dssp CCEEECC----SEEEEEESSTTCS-----EECCCTTSCSSCEEEEECSSCEEEEECSCSSCCEETTE-----ECS---EE
T ss_pred CcEEEEC----CCCEEEeCCCCCC-----EECCCCCcChhhCEEEEeCCEEEEEECCCCCCEEECCE-----ECc---eE
Confidence 3889998 5559999999887 99999999999999999999999999999999999998 886 68
Q ss_pred EeCCCCEEEeCCCceEEEEEEEe
Q 010723 460 RFRPSDTIEFGSDKKAIFRVKVI 482 (502)
Q Consensus 460 ~l~~gd~i~~g~~~~~~~~~~~~ 482 (502)
.|++||+|.||.. .|+|++.
T Consensus 78 ~L~~gd~i~iG~~---~~~~~~~ 97 (100)
T 3po8_A 78 QLADGDVIRLGHS---EIIVRMH 97 (100)
T ss_dssp ECCTTCEEEETTE---EEEEEEE
T ss_pred ECCCCCEEEECCE---EEEEEEE
Confidence 9999999999997 5555543
No 35
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.78 E-value=4.5e-18 Score=179.77 Aligned_cols=230 Identities=8% Similarity=-0.012 Sum_probs=143.2
Q ss_pred CCeEEEeeHHHHHHHHHhccC---CCeEecCCeEEEEEeeCCe--EEEEEccCcEEEeeEEEEecCCCchhhccccCCCC
Q 010723 19 LPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLIGADGIWSKVRKNLFGPQE 93 (502)
Q Consensus 19 ~p~~~~i~R~~L~~~L~~~~~---~~~v~~~~~v~~i~~~~~~--v~v~~~dg~~~~adlvVgADG~~S~vR~~l~~~~~ 93 (502)
.++++.++|..|.+.|.+.+. .+.++++ +|++++.++++ +.|++.+|++++||+||+|||.+|.+++.+++...
T Consensus 185 ~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~~~ 263 (550)
T 2e4g_A 185 TNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEEPF 263 (550)
T ss_dssp SCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCCCE
T ss_pred CCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCCCc
Confidence 467899999999999998762 5678899 99999876554 67888899899999999999999999555433221
Q ss_pred Ccc----cceEEEEEEecCCCC--CccccceEEEecCceEEEEEeCCCCeEEEEEEEcCCCCCCCCCcchHHHHHHHhhC
Q 010723 94 AIY----SGYTCYTGIADFVPA--DIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEG 167 (502)
Q Consensus 94 ~~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 167 (502)
..+ ....++......... .... .......++++++.+|..+ .....+.+... . ...+...+.+.+.+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~ipl~~-~~~~g~v~~~~--~-~~~~~~~~~l~~~~~~ 338 (550)
T 2e4g_A 264 LDMSDHLLNDSAVATQVPHDDDANGVEP-FTSAIAMKSGWTWKIPMLG-RFGTGYVYSSR--F-ATEDEAVREFCEMWHL 338 (550)
T ss_dssp EECTTTCCCCEEEEEEEECCHHHHCCCS-SEEEEECSSEEEEEEECSS-EEEEEEEECTT--T-SCHHHHHHHHHHHTTC
T ss_pred ccccccccccceEEEeecccCCcccCCC-ceeeeecCCceEEEccCCC-ccceEEEEecC--C-CChHHHHHHHHHhhCc
Confidence 111 111122211111100 0111 1122333556777778766 33222222111 1 1111222334444332
Q ss_pred CChHHHHHHHcCCccceeeeecccCCCCCcccCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhcCCCCCC
Q 010723 168 WCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKT 247 (502)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~~~ 247 (502)
. +.+ ...... ++ ......+|..+|++|||||||.++|+.|||+|+|++||..|+++|...
T Consensus 339 ~-p~l-------~~~~~i--~~-~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~~--------- 398 (550)
T 2e4g_A 339 D-PET-------QPLNRI--RF-RVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPDK--------- 398 (550)
T ss_dssp C-TTT-------SCCEEE--EC-CCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCCT---------
T ss_pred C-ccc-------CCCceE--Ee-cCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhcccc---------
Confidence 1 111 111111 11 112234567899999999999999999999999999999999877531
Q ss_pred hhhHHHHHHHHHHHhHHHHHHHHHHHHH
Q 010723 248 PIDIVSALKSYERARRLRVAVIHGLARS 275 (502)
Q Consensus 248 ~~~~~~~L~~Y~~~R~~~~~~~~~~s~~ 275 (502)
...+.+|+.|+++|+++...+.++...
T Consensus 399 -~~~~~~l~~Y~~~~~~~~~~i~~~~~~ 425 (550)
T 2e4g_A 399 -SLNPVLTARFNREIETMFDDTRDFIQA 425 (550)
T ss_dssp -TCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234689999999999999887766554
No 36
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}
Probab=99.78 E-value=1.6e-18 Score=143.07 Aligned_cols=98 Identities=24% Similarity=0.361 Sum_probs=81.0
Q ss_pred hccCCcEEEEec-CCCCCcccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEEeCCeEEEEEcCCccc
Q 010723 362 RAMNGEWFLVPS-GSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHG 440 (502)
Q Consensus 362 ~~~~~~~~l~~~-~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~d~~s~nG 440 (502)
......|.|+.. +...+ ..+.|. ...++|||.+.|+ |+++++.|||.||+|.++++.|+|+|++|+||
T Consensus 6 ~~p~~~~~L~v~~g~~~g--~~~~l~----~~~~~IGR~~~~d-----i~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nG 74 (115)
T 2xt9_B 6 GLPSGSALLVVKRGPNAG--SRFLLD----QPTTSAGRHPDSD-----IFLDDVTVSRRHAEFRLEGGEFQVVDVGSLNG 74 (115)
T ss_dssp --CCSCEEEEEEESTTTT--CEEEEC----SSEEEEESSTTSS-----EECCSTTSCSSCEEEEEETTEEEEEECSCSSC
T ss_pred CCCCCcEEEEEEeCCCCC--eEEEEC----CCCEEECCCCCCC-----EEeCCcccChhheEEEEECCEEEEEECCCCCC
Confidence 334455555554 44433 889998 5569999999888 99999999999999999999999999999999
Q ss_pred eeecCCCCceeecCCCCcEEeCCCCEEEeCCCceEEEEEEE
Q 010723 441 TYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 481 (502)
Q Consensus 441 t~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~ 481 (502)
|||||. ++. +..|++||+|+||.. .|+|..
T Consensus 75 t~vng~-----~i~---~~~L~~gd~i~iG~~---~l~~~~ 104 (115)
T 2xt9_B 75 TYVNRE-----PVD---SAVLANGDEVQIGKF---RLVFLT 104 (115)
T ss_dssp EEETTE-----ECS---EEEECTTCEEEETTE---EEEEEC
T ss_pred eEECCE-----Ecc---eEECCCCCEEEECCE---EEEEEe
Confidence 999999 886 589999999999997 566654
No 37
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=99.76 E-value=6.8e-19 Score=151.31 Aligned_cols=95 Identities=19% Similarity=0.283 Sum_probs=80.1
Q ss_pred hccCCcEEEEecCCCCCcccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCcc----ccccceEEEEe-CCeEEEEEcC
Q 010723 362 RAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ----VSKMHARISYK-DGAFYLIDLQ 436 (502)
Q Consensus 362 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~----vSr~Ha~i~~~-~~~~~i~d~~ 436 (502)
++....|+|...+.. . ..+.|. .+..++|||.+.|+ |+++++. |||.||+|.++ ++.|+|+|++
T Consensus 12 ~~~~~~w~L~~~G~~-~--~~~~l~---~~~~~~IGR~~~~d-----i~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~ 80 (145)
T 2csw_A 12 RAGGRSWCLRRVGMS-A--GWLLLE---DGCEVTVGRGFGVT-----YQLVSKICPLMISRNHCVLKQNPEGQWTIMDNK 80 (145)
T ss_dssp TTCSEEEEECCTTCS-C--CBEECC---TTCCEEEESSTTSS-----EECCCSSCGGGSCTTCEEEEECTTSCEEEEBSS
T ss_pred CCCCccEEEEEeCCC-C--CeEEeC---CCCcEEECCCCCCC-----EEECCCCcCCCCChhHeEEEEcCCCeEEEEECC
Confidence 445668998833332 3 567775 24459999999887 9999998 99999999995 8889999999
Q ss_pred CccceeecCCCCceeecCCCCcEEeCCCCEEEeCCC
Q 010723 437 SEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 472 (502)
Q Consensus 437 s~nGt~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~ 472 (502)
|+||||||+. ++.++++..|++||+|.||..
T Consensus 81 S~NGT~vNg~-----~i~~~~~~~L~~GD~I~iG~~ 111 (145)
T 2csw_A 81 SLNGVWLNRA-----RLEPLRVYSIHQGDYIQLGVP 111 (145)
T ss_dssp CSSCEEESSC-----BCCBTCCEECCSSCCEEESCC
T ss_pred CCCCeEECCE-----ECCCCccEECCCCCEEEECCC
Confidence 9999999999 999888999999999999983
No 38
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=99.76 E-value=2.2e-18 Score=149.61 Aligned_cols=96 Identities=24% Similarity=0.342 Sum_probs=80.5
Q ss_pred CCcEEEEec-CCCCCcccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEEeCCeEEEEEcCCccceee
Q 010723 365 NGEWFLVPS-GSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYV 443 (502)
Q Consensus 365 ~~~~~l~~~-~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~d~~s~nGt~v 443 (502)
...|.|+.. +...+ ..+.|. +..++|||.+.|+ |+|+++.|||+||+|.++++.|+|+|++|+|||||
T Consensus 53 ~~~~~L~v~~G~~~g--~~~~L~----~~~~~IGR~~~~d-----i~l~d~~VSr~HA~I~~~~~~~~l~DlgS~NGT~V 121 (162)
T 2kfu_A 53 PGSALLVVKRGPNAG--SRFLLD----QAITSAGRHPDSD-----IFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYV 121 (162)
T ss_dssp SSCCEEEEEESTTCS--CEEETT----SSEEEEESCSSSS-----EESTTTSSSSCSEEEEEETTEEEEECCCCSSCEEE
T ss_pred CccEEEEEEeCCCCC--eEEEEC----CCCEEECCCCCCC-----EEECCCCcChhhEEEEEECCEEEEEECCCCCCeEE
Confidence 444555544 44433 788888 5569999999888 99999999999999999999999999999999999
Q ss_pred cCCCCceeecCCCCcEEeCCCCEEEeCCCceEEEEEEEe
Q 010723 444 TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 482 (502)
Q Consensus 444 n~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~~ 482 (502)
||. ++. +..|++||+|+||.. .|+|...
T Consensus 122 Ng~-----~i~---~~~L~~GD~I~iG~~---~l~f~~~ 149 (162)
T 2kfu_A 122 NRE-----PVD---SAVLANGDEVQIGKF---RLVFLTG 149 (162)
T ss_dssp TTB-----CCS---EEECCSSCEEEETTE---EEEEECS
T ss_pred CCE-----Ecc---eEECCCCCEEEECCE---EEEEEeC
Confidence 999 886 589999999999997 6666553
No 39
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=99.76 E-value=4.9e-18 Score=146.66 Aligned_cols=104 Identities=20% Similarity=0.282 Sum_probs=82.7
Q ss_pred hhccCCcE-EEEecCCCCCcccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCcc---------ccccceEEEEeCC--
Q 010723 361 ERAMNGEW-FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ---------VSKMHARISYKDG-- 428 (502)
Q Consensus 361 e~~~~~~~-~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~---------vSr~Ha~i~~~~~-- 428 (502)
++.+...| .|+.... .. ..+.|. +..++|||.+.|+ |+++++. |||.||+|.+.++
T Consensus 23 ~~~~~~~w~~L~~~~~-~~--~~i~L~----~~~~~IGR~~~~d-----i~l~d~~~~~~~~~~~VSr~Ha~I~~~~~~~ 90 (149)
T 1gxc_A 23 EEPTPAPWARLWALQD-GF--ANLECV----NDNYWFGRDKSCE-----YCFDEPLLKRTDKYRTYSKKHFRIFREVGPK 90 (149)
T ss_dssp ------CCEEEEECST-TC--CCEEEC----SSEEEEESSTTCS-----EECCCGGGGGSSGGGGSCTTCEEEEEEECTT
T ss_pred cCCCCCeeEEEEEcCC-CC--ceEEEC----CCCEEecCCCCCC-----EEECCccccccccCCcCchhheEEEEECCCC
Confidence 35555667 5554442 22 568888 5669999999887 9999985 9999999999866
Q ss_pred ---eEEEEEcCCccceeecCCCCceeecCCCCcEEeCCCCEEEeCCCceEEEEEEEe
Q 010723 429 ---AFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 482 (502)
Q Consensus 429 ---~~~i~d~~s~nGt~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~~ 482 (502)
.|+|+|+ |+|||||||. ++.++.++.|++||+|.||......|.|.-.
T Consensus 91 ~~~~~~i~D~-StNGT~VNg~-----~i~~~~~~~L~~GD~I~lG~~~~~~f~f~d~ 141 (149)
T 1gxc_A 91 NSYIAYIEDH-SGNGTFVNTE-----LVGKGKRRPLNNNSEIALSLSRNKVFVFFDL 141 (149)
T ss_dssp SSEEEEEEEC-CSSCEEETTE-----ECCTTCEEECCTTEEEEESSTTCEEEEEEET
T ss_pred ceeEEEEEEC-CCCCeEECCE-----ECCCCCeEECCCCCEEEECCCCCeEEEEEEC
Confidence 8999996 9999999999 9999999999999999999976667877654
No 40
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=99.76 E-value=2.8e-18 Score=148.62 Aligned_cols=97 Identities=23% Similarity=0.350 Sum_probs=79.0
Q ss_pred cE-EEEecCCCCCcccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEE--------eCCeEEEEEcCC
Q 010723 367 EW-FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISY--------KDGAFYLIDLQS 437 (502)
Q Consensus 367 ~~-~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~--------~~~~~~i~d~~s 437 (502)
.| .|+..+.+. ++.+.|. . +..++|||.+.|+ |+++++.|||.||+|.+ .++.|+|+|+ |
T Consensus 17 ~~~~L~~~~~~~--g~~~~l~-~--~~~~~IGR~~~~d-----i~l~d~~VSr~Ha~I~~~~~~~~~~~~~~~~l~Dl-S 85 (151)
T 2jqj_A 17 CLGHLVNLIPGK--EQKVEIT-N--RNVTTIGRSRSCD-----VILSEPDISTFHAEFHLLQMDVDNFQRNLINVIDK-S 85 (151)
T ss_dssp EEEEEEEEETTE--EEEEEEE-C--CSCEEEESSTTSS-----EECCCTTCCTTSEEEEEEEEEETTEEEEEEEEEEC-C
T ss_pred ceEEEEEecCCC--ceEEEEc-C--CCeEEeCCCCCCC-----EEECCCCCccccCEEEEecccCCcCcCCEEEEEEC-C
Confidence 44 444445433 3788887 2 2559999999887 99999999999999999 7788999999 9
Q ss_pred ccceeecCCCCceeecCCCCcEEeCCCCEEEeCCCceEEEEEEEe
Q 010723 438 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 482 (502)
Q Consensus 438 ~nGt~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~~ 482 (502)
+|||||||. ++.++ +..|++||+|.||.+. .|+|.+.
T Consensus 86 ~NGT~VNg~-----~i~~~-~~~L~~GD~I~lG~~~--~~~f~~~ 122 (151)
T 2jqj_A 86 RNGTFINGN-----RLVKK-DYILKNGDRIVFGKSC--SFLFKYA 122 (151)
T ss_dssp SSCEEETTE-----ECCSS-CEEECSSEEEEETTTE--EEEEEEC
T ss_pred CCCeEECCE-----EcCCC-ceECCCCCEEEECCCc--EEEEEEc
Confidence 999999999 99877 8999999999999942 4555554
No 41
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*
Probab=99.75 E-value=1.8e-18 Score=145.67 Aligned_cols=85 Identities=26% Similarity=0.283 Sum_probs=75.7
Q ss_pred ccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEEeCCeEEEEEcCCccceeecCCCCceeecCCCCcE
Q 010723 380 SQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPA 459 (502)
Q Consensus 380 ~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~d~~s~nGt~vn~~~~~~~~~~~~~~~ 459 (502)
++.+.|. ...++|||.++|+ |+++++.|||.||+|.++++.|+|+|++|+|||||||. ++. ++.
T Consensus 25 g~~~~l~----~~~~~IGR~~~~d-----i~l~d~~VSr~Ha~i~~~~~~~~l~Dl~S~nGt~vNg~-----~i~--~~~ 88 (128)
T 1r21_A 25 GPHFPLS----LSTCLFGRGIECD-----IRIQLPVVSKQHCKIEIHEQEAILHNFSSTNPTQVNGS-----VID--EPV 88 (128)
T ss_dssp EEEEECC----SSEEEEESSTTSS-----EECCCTTSCTTCEEEEECSSCEEECCCCSSSCCEETTE-----ECS--SCE
T ss_pred ceEEEEC----CCCEEECCCCCCC-----EEECCCCCChhHEEEEEECCEEEEEECCCCCCEEECCE-----ECC--CcE
Confidence 4788888 5569999999888 99999999999999999999999999999999999999 887 468
Q ss_pred EeCCCCEEEeCCCceEEEEEEEec
Q 010723 460 RFRPSDTIEFGSDKKAIFRVKVIG 483 (502)
Q Consensus 460 ~l~~gd~i~~g~~~~~~~~~~~~~ 483 (502)
.|++||+|.||.. .|+|....
T Consensus 89 ~L~~Gd~i~iG~~---~~~~~~~~ 109 (128)
T 1r21_A 89 RLKHGDVITIIDR---SFRYENES 109 (128)
T ss_dssp ECCTTEEEECSSC---EEEEEEC-
T ss_pred EcCCCCEEEECCE---EEEEEeCC
Confidence 9999999999988 67776543
No 42
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.75 E-value=5.8e-18 Score=173.58 Aligned_cols=230 Identities=19% Similarity=0.184 Sum_probs=136.6
Q ss_pred eEEEeeHHHHHHHHHhccC--CCeEecCC-eEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchhhccccCCCCC--c
Q 010723 21 VTRVISRMTLQQILAKAVG--DEIILNES-NVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVRKNLFGPQEA--I 95 (502)
Q Consensus 21 ~~~~i~R~~L~~~L~~~~~--~~~v~~~~-~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR~~l~~~~~~--~ 95 (502)
.++.+++..+...|.+.+. .+.+++.. ++.+++ .....+|+||+|||.+|.+|......... .
T Consensus 115 ~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~------------~~~~~ad~VV~AdG~~S~~~~~~~~~~~~~~~ 182 (430)
T 3ihm_A 115 PSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLE------------GLSEQYDLLVVCTGKYALGKVFEKQSENSPFE 182 (430)
T ss_dssp EEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHH------------HHHTTSSEEEECCCCTTGGGGSCBCGGGCCCS
T ss_pred cceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhh------------hhcccCCEEEECCCCcchHHhccCCCCCCccc
Confidence 4688999999999998763 23344311 011110 00125899999999999998544222111 1
Q ss_pred ccceEEEEEEec-CCCCCccccceEEEecCceEEEEEeC--CCCeEEEEEEEcCCCCCC---------CCCcchHHHHHH
Q 010723 96 YSGYTCYTGIAD-FVPADIESVGYRVFLGHKQYFVSSDV--GAGKMQWYAFHKEPAGGV---------DGPEGKKERLLK 163 (502)
Q Consensus 96 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~ 163 (502)
+.+.....++.. ..+.+.....+..+.+.+.++++ |. .++...+++....+.... ..++...+.+++
T Consensus 183 ~p~r~~~~~~~~g~~~~~~~~~~~~~~~~~G~~~~~-p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (430)
T 3ihm_A 183 KPQRALCVGLFKGIKEAPIRAVTMSFSPGHGELIEI-PTLSFNGMSTALVLENHIGSDLEVLAHTKYDDDPRAFLDLMLE 261 (430)
T ss_dssp SCSSEEEEEEEESBCCCSSCCEEEEEETTTEEEEEE-EEEETTEEEEEEEEEECTTSSSGGGGTSCTTTCHHHHHHHHHH
T ss_pred CCCeeEEEEEEccCCCCCcCeeeeeecCCCcceEEe-cccCCCcceEEEEEEecCCCcHHHhccccCCCCHHHHHHHHHH
Confidence 222222222221 11222223344455455544443 42 234444444433332111 112233456777
Q ss_pred HhhCCChHHHHHHHcCC------cccee---eeecccCCCCCcccCCCEEE-EcCCccccCCCchhhhhHHHHHHHHHHH
Q 010723 164 IFEGWCDNVVDLILATD------EEAIL---RRDIYDRTPIFTWGRGRVTL-LGDSVHAMQPNLGQGGCMAIEDGYQLAV 233 (502)
Q Consensus 164 ~~~~~~~~~~~~~~~~~------~~~~~---~~~i~~~~~~~~~~~grvvL-vGDAAH~~~P~~GqG~n~al~Da~~La~ 233 (502)
.+..|.+.+.+.+.... ...+. .+++. ..+..+|..||++| +|||||.++|++|||+|+||+||.+|++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~ 340 (430)
T 3ihm_A 262 KLGKHHPSVAERIDPAEFDLANSSLDILQGGVVPAF-RDGHATLNNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGE 340 (430)
T ss_dssp HHHHHCHHHHTTBCTTTCEESSSTTSEEEECCCCEE-BCSEEECTTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHH
T ss_pred HHHHhCccHHHHHhhchhccccCccceeecceeecc-cccccccCCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHH
Confidence 78888888777665544 11111 12222 23456899999999 9999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCChhhHHHHHHHHHHHhH-HHHHHHHHHHH
Q 010723 234 ELEKACKKSNESKTPIDIVSALKSYERARR-LRVAVIHGLAR 274 (502)
Q Consensus 234 ~L~~~~~~~~~~~~~~~~~~~L~~Y~~~R~-~~~~~~~~~s~ 274 (502)
+|... .+..++|..|+.+|+ .++..+.+.++
T Consensus 341 ~l~~~----------~~~~~~~~~~~~~r~~~~~~~~~~~~~ 372 (430)
T 3ihm_A 341 EILAH----------SVYDLRFSEHLERRRQDRVLCATRWTN 372 (430)
T ss_dssp HHHHC----------SCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhc----------CCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99875 124689999999998 66655554444
No 43
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A
Probab=99.75 E-value=1.7e-18 Score=154.04 Aligned_cols=119 Identities=20% Similarity=0.259 Sum_probs=86.6
Q ss_pred chhhhhhccCchhhhhc-----------cCCcEEEEecCCCC---CcccceEEeecCCCCCEEEcCCCCCC---------
Q 010723 347 SDNLRTWFRDDDALERA-----------MNGEWFLVPSGSEN---VVSQPIYLSVSHENEPYLIGSESHED--------- 403 (502)
Q Consensus 347 ~~~~~~~~~~~~~le~~-----------~~~~~~l~~~~~~~---~~~~~~~l~~~~~~~~~~iGR~~~~~--------- 403 (502)
++-+++|.++.+|..+. ....|.|....++. .....+.|. ++..++|||.+.++
T Consensus 47 ~gv~lky~eP~~a~~P~~~w~~~~~~~~~~~~~~L~v~k~g~k~~~~i~~~~L~---~~s~y~IGR~~~~~~~~~~~~~~ 123 (205)
T 3elv_A 47 EGIALKHVEPQDAISPDNYMDMLGLEARDRTMYELVIYRKNDKDKGPWKRYDLN---GRSCYLVGRELGHSLDTDLDDRT 123 (205)
T ss_dssp -----CCCCCTTBCCHHHHHHHTTCCGGGSCCEEEEEEEGGGCTTCCSEEEECS---SCSEEEEEECCCC---------C
T ss_pred ccEEEeccCCCcccCCchHHhhcccccccCCceEEEEEeCCCcccccceEEEec---CCCceeecccccccccccccccc
Confidence 45556666666665442 24568777774332 123567776 34569999997421
Q ss_pred -CCCceeeeCCccccccceEEEEeC-C---eEEEEEcCCccceeecCCCCceeecCCCCcEEeCCCCEEEeCCCc
Q 010723 404 -FSRTSIVIPSAQVSKMHARISYKD-G---AFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDK 473 (502)
Q Consensus 404 -~~~~~i~~~~~~vSr~Ha~i~~~~-~---~~~i~d~~s~nGt~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~~ 473 (502)
...|||+|++++|||.||+|.+.+ + .|+|+|++|+|||||||. +|.+..++.|++||+|+||...
T Consensus 124 e~~~cDIvL~dp~VSR~HA~I~~~~~~~~~~~~l~DLgStNGTfVNG~-----rI~~~~~~~L~~GD~I~fG~s~ 193 (205)
T 3elv_A 124 EIVVADIGIPEETSSKQHCVIQFRNVRGILKCYVMDLDSSNGTCLNNV-----VIPGARYIELRSGDVLTLSEFE 193 (205)
T ss_dssp CCCCCSEEECCTTSCTTCEEEEEEEETTEEEEEEEECSCSSCCEETTE-----ECCBTSCEECCTTCEEESSSSG
T ss_pred cCccceEEeCCCCCCcccEEEEEecCCCceeEEEEeCCCCCCCeECCE-----ECCCCceeECCCCCEEEECCCC
Confidence 233779999999999999998763 2 499999999999999999 9998888999999999999753
No 44
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}
Probab=99.75 E-value=3.7e-19 Score=152.25 Aligned_cols=92 Identities=25% Similarity=0.463 Sum_probs=78.7
Q ss_pred CcEEEEecCCCCCcccceEEeecCCCC-CEEEcCCCC-CCCCCceeeeCCccccccceEEEEeC--CeEEEEEcCCccce
Q 010723 366 GEWFLVPSGSENVVSQPIYLSVSHENE-PYLIGSESH-EDFSRTSIVIPSAQVSKMHARISYKD--GAFYLIDLQSEHGT 441 (502)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~~l~~~~~~~-~~~iGR~~~-~~~~~~~i~~~~~~vSr~Ha~i~~~~--~~~~i~d~~s~nGt 441 (502)
..|.|....+. .....+.|. .. .++|||.+. |+ |+++++.|||.||+|.+++ +.|+|+|++|+|||
T Consensus 33 ~~~~L~v~~g~-~~g~~~~l~----~~~~~~IGR~~~~~d-----i~l~d~~VSr~Ha~i~~~~~~~~~~l~Dl~S~NGT 102 (140)
T 2jpe_A 33 PGLHLDVVKGD-KLIEKLIID----EKKYYLFGRNPDLCD-----FTIDHQSCSRVHAALVYHKHLKRVFLIDLNSTHGT 102 (140)
T ss_dssp SSCBEEEESSS-SEEEEECCS----SCSBCCBSSCTTTSS-----SCCCCSSSCTTSBEEEEBSSSCCEEEECCSCSSCE
T ss_pred cCEEEEEEcCC-CcceEEEeC----CCCeEEecCCCccCC-----EEeCCCCcChhheEEEEECCCCcEEEEECCCCCCe
Confidence 45666655433 223677777 43 499999998 77 9999999999999999986 89999999999999
Q ss_pred eecCCCCceeecCCCCcEEeCCCCEEEeCCC
Q 010723 442 YVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 472 (502)
Q Consensus 442 ~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~ 472 (502)
||||. ++.++.+..|++||+|+||..
T Consensus 103 ~vNg~-----~l~~~~~~~L~~gd~i~~G~~ 128 (140)
T 2jpe_A 103 FLGHI-----RLEPHKPQQIPIDSTVSFGAS 128 (140)
T ss_dssp ESSSC-----EECSSSCCEECTTCCBBCSSC
T ss_pred EECCE-----ECCCCccEECCCCCEEEECCc
Confidence 99999 999888999999999999998
No 45
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=99.75 E-value=4e-18 Score=141.17 Aligned_cols=100 Identities=25% Similarity=0.352 Sum_probs=82.7
Q ss_pred cE-EEEecCCCCCcccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCc-cccccceEEEEe--CCeEEEEEcCCcccee
Q 010723 367 EW-FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSA-QVSKMHARISYK--DGAFYLIDLQSEHGTY 442 (502)
Q Consensus 367 ~~-~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~-~vSr~Ha~i~~~--~~~~~i~d~~s~nGt~ 442 (502)
.| .|++...+ .....+.|. +..++|||.+.|+ |++++. .|||.||+|.++ ++.|+|+| +|+||||
T Consensus 3 ~wg~L~~~~~~-~~~~~~~l~----~~~~~iGR~~~~d-----i~l~~~~~vSr~Ha~i~~~~~~~~~~l~D-~S~NGt~ 71 (116)
T 1lgp_A 3 PWGRLLRLGAE-EGEPHVLLR----KREWTIGRRRGCD-----LSFPSNKLVSGDHCRIVVDEKSGQVTLED-TSTSGTV 71 (116)
T ss_dssp CCEEECCTTCC-SSSCCEEEC----SSEEEEESSTTSS-----EECTTCTTSCTTCEEEEECTTTCCEEEEE-CSSSCCC
T ss_pred CEEEEEEeCCC-CCccEEEEC----CCCEEECCCCCCC-----EEeCCCCCCChhHeEEEEECCCCeEEEEE-CCcCCcE
Confidence 46 45555432 333789999 6669999999888 999875 999999999997 78999999 9999999
Q ss_pred ecCCCCceeecCCCCcEEeCCCCEEEeCCCc-----eEEEEEEEe
Q 010723 443 VTDNEGRRYRVSSNFPARFRPSDTIEFGSDK-----KAIFRVKVI 482 (502)
Q Consensus 443 vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~~-----~~~~~~~~~ 482 (502)
|||. ++.++.+..|++||+|.||..+ .+.|.|...
T Consensus 72 vng~-----~l~~~~~~~L~~GD~i~~G~~~~~~~~~~~f~f~~~ 111 (116)
T 1lgp_A 72 INKL-----KVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLYESL 111 (116)
T ss_dssp CCCC-----CCCCSSCCCCCTTCEEEEECCSSCGGGCEEEECCCS
T ss_pred ECCE-----EcCCCCcEECCCCCEEEEeccCCCCCceEEEEEEcc
Confidence 9999 9998888999999999999864 456766543
No 46
>1mzk_A Kinase associated protein phosphatase; beta sandwich, hydrolase; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.75 E-value=1.1e-17 Score=142.71 Aligned_cols=93 Identities=25% Similarity=0.395 Sum_probs=76.2
Q ss_pred EEEEecCCCCCcccceEEeecCC--CCCEEEcCCCCCCCCCceeeeCCccccccceEEEEeC--CeEEEEEcCCccceee
Q 010723 368 WFLVPSGSENVVSQPIYLSVSHE--NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD--GAFYLIDLQSEHGTYV 443 (502)
Q Consensus 368 ~~l~~~~~~~~~~~~~~l~~~~~--~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~--~~~~i~d~~s~nGt~v 443 (502)
+.|....+ ...+..+.|. ... +..++|||.+.|+ |+++++.|||.||+|.+++ +.|+|+|++|+|||||
T Consensus 8 ~~L~v~~G-~~~g~~~~l~-~~~~~~~~~~IGR~~~~d-----i~l~d~~VSr~Ha~i~~~~~~~~~~l~DlgS~NGT~v 80 (139)
T 1mzk_A 8 LFLEVIAG-PAIGLQHAVN-STSSSKLPVKLGRVSPSD-----LALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLV 80 (139)
T ss_dssp EEEEECSS-TTCSCEEEEC-TTCSTTCSEEEESSSSCS-----EECCCTTSSSEEEEEEEETTTTEEEEEETTCSSCCEE
T ss_pred EEEEEEeC-CCCCeEEEec-CCCCccceEEeeCCCCCC-----EEeCCCCCChHHcEEEEECCCCEEEEEECCCCCCEEE
Confidence 44444432 2334788888 321 1369999999988 9999999999999999985 3799999999999999
Q ss_pred cCCCCceeecCC--------CCcEEeCCCCEEEeCCC
Q 010723 444 TDNEGRRYRVSS--------NFPARFRPSDTIEFGSD 472 (502)
Q Consensus 444 n~~~~~~~~~~~--------~~~~~l~~gd~i~~g~~ 472 (502)
||. ++.+ +.+..|++||+|+||..
T Consensus 81 Ng~-----~i~~~~~~~~~~~~~~~L~~GD~I~iG~~ 112 (139)
T 1mzk_A 81 NSH-----SISHPDLGSRKWGNPVELASDDIITLGTT 112 (139)
T ss_dssp TTE-----ESSCCCTTTCCCCCCEECCTTEEEECSSS
T ss_pred CCE-----ECcCcccccccCCceEECCCCCEEEECCE
Confidence 999 8874 67899999999999998
No 47
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}
Probab=99.74 E-value=4.7e-18 Score=145.83 Aligned_cols=80 Identities=25% Similarity=0.378 Sum_probs=72.5
Q ss_pred ccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEEeCCeEEEEEcCCccceeecCCCCceeecCCCCcE
Q 010723 380 SQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPA 459 (502)
Q Consensus 380 ~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~d~~s~nGt~vn~~~~~~~~~~~~~~~ 459 (502)
.+.+.|. ...++|||.++|+ |+|+++.|||.||+|.++++.|+|+|++|+||||||+. ++. +.
T Consensus 77 g~~~~L~----~~~~~IGR~~~~d-----I~L~d~~VSr~HA~I~~~~~~~~l~DlgStNGT~VNG~-----~i~---~~ 139 (157)
T 3oun_A 77 GRTYQLR----EGSNIIGRGQDAQ-----FRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNA-----PVQ---EW 139 (157)
T ss_dssp CCEEECC----SEEEEEESSTTCS-----EECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTE-----ECS---EE
T ss_pred CeEEEEC----CCcEEEEeCCCCC-----EEeCCCCcChhHEEEEEECCEEEEEECCCCCCeEECCE-----ECc---eE
Confidence 3889998 5559999999888 99999999999999999999999999999999999999 886 68
Q ss_pred EeCCCCEEEeCCCceEEEEE
Q 010723 460 RFRPSDTIEFGSDKKAIFRV 479 (502)
Q Consensus 460 ~l~~gd~i~~g~~~~~~~~~ 479 (502)
.|++||+|+||.. .|+|
T Consensus 140 ~L~~GD~I~lG~~---~l~f 156 (157)
T 3oun_A 140 QLADGDVIRLGHS---EIIV 156 (157)
T ss_dssp ECCTTCEEEETTE---EEEE
T ss_pred ECCCCCEEEECCE---EEEE
Confidence 9999999999997 5554
No 48
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=99.73 E-value=7.2e-18 Score=146.74 Aligned_cols=97 Identities=18% Similarity=0.318 Sum_probs=80.8
Q ss_pred EEEecCCCCCcccceEEeecCCCC--CEEEcCCCCCCCCCceeeeCCccccccceEEEEeC---------------CeEE
Q 010723 369 FLVPSGSENVVSQPIYLSVSHENE--PYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD---------------GAFY 431 (502)
Q Consensus 369 ~l~~~~~~~~~~~~~~l~~~~~~~--~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~---------------~~~~ 431 (502)
.|.|... ....+.+.|. .+ +++|||.+.|+ |+++++.|||.||+|.+.+ +.|+
T Consensus 7 ~L~p~~~-~~~~~~i~L~----~~~~~~~IGR~~~~d-----i~l~d~~VSr~Ha~I~~~~~~~g~~~~~~~~~~~~~~~ 76 (158)
T 1dmz_A 7 TLKPLPD-SIIQESLEIQ----QGVNPFFIGRSEDCN-----CKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIW 76 (158)
T ss_dssp EEEECTT-SSCCCCEEET----TSCSCEEEESSTTSS-----EECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEE
T ss_pred EEEeCCC-CccceEEEEc----CCCceEEECCCCCCC-----EEeCCCCcChHHeEEEEecCccccccccccccccccEE
Confidence 3555443 3334788887 43 49999999887 9999999999999999876 7899
Q ss_pred EEEcCCccceeecCCCCceeecCCCCcEEeCCCCEEEe-----CCCceEEEEEEEe
Q 010723 432 LIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEF-----GSDKKAIFRVKVI 482 (502)
Q Consensus 432 i~d~~s~nGt~vn~~~~~~~~~~~~~~~~l~~gd~i~~-----g~~~~~~~~~~~~ 482 (502)
|+|+ |+|||||||. ++.++.+..|++||+|+| |.. .+.|++...
T Consensus 77 l~Dl-StNGT~VNg~-----ri~~~~~~~L~~GD~I~l~~d~~G~~-~l~f~~~~~ 125 (158)
T 1dmz_A 77 YCHT-GTNVSYLNNN-----RMIQGTKFLLQDGDEIKIIWDKNNKF-VIGFKVEIN 125 (158)
T ss_dssp EEEC-STTCCEETTE-----ECCSSEEEECCSSCCEESCCCTTTTC-CCCEEEECS
T ss_pred EEEC-CcCCeEECCE-----EcCCCceEEcCCCCEEEEeecCCCCE-EEEEEEEeC
Confidence 9999 9999999999 999888899999999999 887 556666654
No 49
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=99.73 E-value=1.5e-17 Score=139.95 Aligned_cols=88 Identities=27% Similarity=0.397 Sum_probs=72.7
Q ss_pred EEEEecCCCCCcccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEEe---CC--eEEEEEc-----CC
Q 010723 368 WFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK---DG--AFYLIDL-----QS 437 (502)
Q Consensus 368 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~---~~--~~~i~d~-----~s 437 (502)
.+|+..+... .+.+.|. +..++|||.+.|+ |+++++.|||.||+|.+. ++ .|+|+|+ +|
T Consensus 12 ~~lvv~~~~~--~~~~~l~----~~~~~IGR~~~~d-----i~l~d~~VSr~Ha~I~~~~~~~g~~~~~l~Dl~~~~~~S 80 (131)
T 3hx1_A 12 HILIILDDAG--RREVLLT----ETFYTIGRSPRAD-----IRIKSQFVSRIHAVLVRKSSDDVQAAYRIIDGDEDGQSS 80 (131)
T ss_dssp EEEEEEETTE--EEEEEEC----SSEEEEESSTTSS-----EECCCSSSCTTCEEEEEC------CCEEEEESCTTSCCC
T ss_pred eEEEEECCCC--cEEEEEC----CCCEEECCCCCCC-----EEECCCCcChhheEEEEEccCCCceEEEEEECCCCCCCC
Confidence 3444444433 3788888 5569999999988 999999999999999986 23 4999999 79
Q ss_pred ccceeecCCCCceeecCCCCcEEeCCCCEEEeCCCce
Q 010723 438 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKK 474 (502)
Q Consensus 438 ~nGt~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~ 474 (502)
+|||||||. ++.+ ..|++||+|+||....
T Consensus 81 ~NGT~vNg~-----~i~~---~~L~~GD~I~iG~~~~ 109 (131)
T 3hx1_A 81 VNGLMINGK-----KVQE---HIIQTGDEIVMGPQVS 109 (131)
T ss_dssp SSCEEETTE-----EESE---EECCTTCEEECSTTCE
T ss_pred CCceEECCE-----EeEe---EECCCCCEEEECCEEE
Confidence 999999999 8873 8999999999999844
No 50
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.72 E-value=5.8e-18 Score=150.20 Aligned_cols=109 Identities=16% Similarity=0.315 Sum_probs=86.4
Q ss_pred hhhhhccCCcEEEEecCCCCCcccceEEeecCCCC--CEEEcCCCCCCCCCceeeeCCccccccceEEEEeC--------
Q 010723 358 DALERAMNGEWFLVPSGSENVVSQPIYLSVSHENE--PYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD-------- 427 (502)
Q Consensus 358 ~~le~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~--~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~-------- 427 (502)
........+.|+.+...++....+.+.|. .+ +++|||.+.|+ |+++++.|||.||+|.+.+
T Consensus 19 ~~~~~~~~g~~l~L~~~~~~~~~~~i~L~----~~~~~~~IGR~~~~d-----i~l~d~~VSr~HA~I~~~~~~~g~~~~ 89 (182)
T 1qu5_A 19 KSSKKKGNGRFLTLKPLPDSIIQESLEIQ----QGVNPFFIGRSEDCN-----CKIEDNRLSRVHCFIFKKRHAVGKSMY 89 (182)
T ss_dssp SCSCCSSSSCCEEECCCTTSSSCSCCCBT----TCCSSEEESSSTTSS-----SCCCCTTSCSSCEEEEEECCCCCSSCC
T ss_pred eecccCCCccEEEEEeCCCCCcceEEEEc----CCCceEEECCCCCCC-----EEECCCCcChHHeEEEEecCccccccc
Confidence 33444455566655444443334777777 43 49999999887 9999999999999999987
Q ss_pred -------CeEEEEEcCCccceeecCCCCceeecCCCCcEEeCCCCEEEe-----CCCceEEEEEEEe
Q 010723 428 -------GAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEF-----GSDKKAIFRVKVI 482 (502)
Q Consensus 428 -------~~~~i~d~~s~nGt~vn~~~~~~~~~~~~~~~~l~~gd~i~~-----g~~~~~~~~~~~~ 482 (502)
+.|+|+|+ |+|||||||. ++.++.+..|++||+|.| |.. .+.|++...
T Consensus 90 e~~~~~~~~~~l~Dl-StNGT~VNg~-----ri~~~~~~~L~~GD~I~l~~d~~G~~-~l~f~~~~~ 149 (182)
T 1qu5_A 90 ESPAQGLDDIWYCHT-GTNVSYLNNN-----RMIQGTKFLLQDGDEIKIIWDKNNKF-VIGFKVEIN 149 (182)
T ss_dssp SSCCCSCCEEEECCC-SSSCCEETTE-----ECCSSEEEECCTTBCCEEEEEGGGTE-EEECCEEES
T ss_pred cccccccceEEEEEC-CcCCeEECCE-----EcCCCcceEcCCCCEEEEEEcCCCCE-EEEEEEEeC
Confidence 89999999 9999999999 999888899999999999 887 555655553
No 51
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=99.71 E-value=2.4e-17 Score=144.46 Aligned_cols=104 Identities=16% Similarity=0.215 Sum_probs=82.3
Q ss_pred CcEEEEecCCCCCcccceEEeecC--------CCCCEEEcCCCCCCCCCceeeeCCc-cccccceEEEEe-CCeEEEEEc
Q 010723 366 GEWFLVPSGSENVVSQPIYLSVSH--------ENEPYLIGSESHEDFSRTSIVIPSA-QVSKMHARISYK-DGAFYLIDL 435 (502)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~~l~~~~--------~~~~~~iGR~~~~~~~~~~i~~~~~-~vSr~Ha~i~~~-~~~~~i~d~ 435 (502)
..|.|+... +...+..+.|. .. .+..++|||.+.|+ |+++++ .|||.||+|.++ ++.|+|+|+
T Consensus 32 ~~~~L~v~~-G~~~g~~~~l~-~~~v~~~~~~~~~~~~IGR~~~~d-----i~l~d~~~vSr~Ha~I~~~~~g~~~l~Dl 104 (164)
T 1g3g_A 32 IVCRVICTT-GQIPIRDLSAD-ISQVLKEKRSIKKVWTFGRNPACD-----YHLGNISRLSNKHFQILLGEDGNLLLNDI 104 (164)
T ss_dssp CCEEEECSS-SSSCCEEECCC-HHHHHHCSSSCCEEEEEESSSSSS-----EECCCCTTTTSSCEEEEECSTTCEEEEEC
T ss_pred ccEEEEEec-CCCCCeEEEec-cccccccccccCCcEEECCCCCCC-----EEeCCcCCcChhHEEEEECCCCCEEEEEC
Confidence 345555543 22333566665 22 01259999999888 999998 699999999995 899999999
Q ss_pred CCccceeecCCCCceeecCCCCcEEeCCCCEEEeCCC---ceEEEEEEEe
Q 010723 436 QSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD---KKAIFRVKVI 482 (502)
Q Consensus 436 ~s~nGt~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~---~~~~~~~~~~ 482 (502)
|+|||||||. ++.++.+..|++||+|.||.. ..+.|.+...
T Consensus 105 -S~NGT~vNg~-----~i~~~~~~~L~~GD~I~iG~~~~~~~~~f~~~~~ 148 (164)
T 1g3g_A 105 -STNGTWLNGQ-----KVEKNSNQLLSQGDEITVGVGVESDILSLVIFIN 148 (164)
T ss_dssp -CSSCEEETTE-----EECTTEEEECCTTCEEEESCSSTTSCEEEEEEEC
T ss_pred -CCCCeEECCE-----EcCCCCceEcCCCCEEEECCCCCCCcEEEEEEeC
Confidence 9999999999 999888899999999999995 4567777765
No 52
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=99.70 E-value=6.6e-17 Score=134.35 Aligned_cols=84 Identities=18% Similarity=0.307 Sum_probs=72.0
Q ss_pred ccceEEeecCCCCCEEEcCC--CCCCCCCceeeeCCccccccceEEEEeCCeEEEEEcCCccceeecCCCCceeecCCCC
Q 010723 380 SQPIYLSVSHENEPYLIGSE--SHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNF 457 (502)
Q Consensus 380 ~~~~~l~~~~~~~~~~iGR~--~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~d~~s~nGt~vn~~~~~~~~~~~~~ 457 (502)
...+.|. .+.++|||. +.|+ |+|+++.|||+||+|.++++.|+|+|++|+|||||||. ++. +
T Consensus 28 ~~~~~L~----~~~~~IGr~r~~~~d-----i~l~~~~vSr~Ha~i~~~~~~~~l~dl~S~ngt~vNg~-----~i~--~ 91 (120)
T 1wln_A 28 PKLYRLQ----LSVTEVGTEKFDDNS-----IQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVDGQ-----RIS--E 91 (120)
T ss_dssp CCEEECC----SEEEECSSSCCSTTC-----CCCCCTTCCSSCEEEEESSSCEEEEESCSSSCEEETSC-----BCS--S
T ss_pred cEEEEEC----CCCEEECCCCCCCCc-----EEECCCCCchhheEEEEcCCEEEEEECCCCCCEEECCE-----EcC--C
Confidence 4778888 455999974 5555 99999999999999999999999999999999999999 887 5
Q ss_pred cEEeCCCCEEEeCCCceEEEEEEE
Q 010723 458 PARFRPSDTIEFGSDKKAIFRVKV 481 (502)
Q Consensus 458 ~~~l~~gd~i~~g~~~~~~~~~~~ 481 (502)
+..|++||+|.||... .|+|..
T Consensus 92 ~~~L~~GD~I~iG~~~--~~~f~~ 113 (120)
T 1wln_A 92 TTMLQSGMRLQFGTSH--VFKFVD 113 (120)
T ss_dssp CEEECTTCEEEETTTE--EEEEEC
T ss_pred CEECCCCCEEEECCce--EEEEEC
Confidence 6899999999999941 566653
No 53
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.67 E-value=4e-16 Score=130.95 Aligned_cols=79 Identities=22% Similarity=0.328 Sum_probs=70.5
Q ss_pred CEEEcCCCCCCCCCceeeeCCc-cccccceEEEE-eCCeEEEEEcCCccceeecCCCCceeecCCCCcEEeCCCCEEEeC
Q 010723 393 PYLIGSESHEDFSRTSIVIPSA-QVSKMHARISY-KDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFG 470 (502)
Q Consensus 393 ~~~iGR~~~~~~~~~~i~~~~~-~vSr~Ha~i~~-~~~~~~i~d~~s~nGt~vn~~~~~~~~~~~~~~~~l~~gd~i~~g 470 (502)
.++|||.+.|+ |+++++ .|||.||+|.+ .++.|+|+|+ |+|||||||. ++.++.+..|++||+|.||
T Consensus 37 ~~~IGR~~~~d-----i~l~~~~~vSr~Ha~i~~~~~g~~~l~Dl-S~NGT~vNg~-----~l~~~~~~~L~~Gd~I~lG 105 (127)
T 1g6g_A 37 VWTFGRNPACD-----YHLGNISRLSNKHFQILLGEDGNLLLNDI-STNGTWLNGQ-----KVEKNSNQLLSQGDEITVG 105 (127)
T ss_dssp EEEEESSTTSS-----EECCSCTTSCSSCEEEEECTTSCEEEEEC-CSSCCEETTE-----ECCTTCCEECCTTCEEEEC
T ss_pred CEEECCCCCCC-----EEeCCCCCCChhHeEEEECCCCcEEEEEC-CcCCeEECCE-----EcCCCCeEEcCCCCEEEEC
Confidence 59999999988 999997 59999999999 4889999999 9999999999 9999889999999999999
Q ss_pred CCc---eEEEEEEEe
Q 010723 471 SDK---KAIFRVKVI 482 (502)
Q Consensus 471 ~~~---~~~~~~~~~ 482 (502)
... .+.|.+...
T Consensus 106 ~~~~~~~i~f~~~~~ 120 (127)
T 1g6g_A 106 VGVESDILSLVIFIN 120 (127)
T ss_dssp TTSGGGCEEEEEEEC
T ss_pred CCccCceEEEEEEeC
Confidence 962 445666654
No 54
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=99.64 E-value=2.6e-16 Score=158.60 Aligned_cols=88 Identities=25% Similarity=0.324 Sum_probs=78.8
Q ss_pred cceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEEeCCeEEEEEcCCccceeecCCCCceeecCCCCcEE
Q 010723 381 QPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPAR 460 (502)
Q Consensus 381 ~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~d~~s~nGt~vn~~~~~~~~~~~~~~~~ 460 (502)
+.+.|. +..++|||.++|+ |+++++.|||.||+|.++++.|+|+|++|+|||||||. ++. .+..
T Consensus 299 ~~~~l~----~~~~~iGR~~~~d-----i~l~~~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~-----~i~--~~~~ 362 (388)
T 2ff4_A 299 RGYPLQ----AAATRIGRLHDND-----IVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHE-----RIR--SAVT 362 (388)
T ss_dssp CEEECC----SSEEEEESSTTSS-----EECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTE-----ECS--SEEE
T ss_pred cEEEEC----CCCEEEecCCCCe-----EEECCCccChhHeEEEEECCEEEEEECCCCCCeEECCE-----ECC--CceE
Confidence 889999 5669999999888 99999999999999999999999999999999999999 885 5789
Q ss_pred eCCCCEEEeCCCceEEEEEEEeccCCC
Q 010723 461 FRPSDTIEFGSDKKAIFRVKVIGTPPN 487 (502)
Q Consensus 461 l~~gd~i~~g~~~~~~~~~~~~~~~~~ 487 (502)
|++||+|.||.. .|+|......|.
T Consensus 363 L~~gd~i~~G~~---~~~~~~~~~~p~ 386 (388)
T 2ff4_A 363 LNDGDHIRICDH---EFTFQISAGTHG 386 (388)
T ss_dssp ECTTCEEEETTE---EEEEECSCCCCC
T ss_pred CCCCCEEEECCE---EEEEEeCCCCCC
Confidence 999999999997 777777655543
No 55
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=99.56 E-value=9.1e-15 Score=137.02 Aligned_cols=101 Identities=23% Similarity=0.351 Sum_probs=78.9
Q ss_pred cEEEEecCCCCCcccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEEeC-----------CeEEEEEc
Q 010723 367 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD-----------GAFYLIDL 435 (502)
Q Consensus 367 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~-----------~~~~i~d~ 435 (502)
-|+|.+.++- ..++.+.|. .++ ++|||...++ .++|.++|++|||+||+|.+.. ..++|+||
T Consensus 1 MWiL~~~~d~-~~Gkr~~L~-pg~---YlIGR~~~~~--~~lI~idD~SISRqHA~I~v~~v~~~dg~~~~~~~l~I~DL 73 (325)
T 3huf_A 1 MWIIEAEGDI-LKGKSRILF-PGT---YIVGRNVSDD--SSHIQVISKSISKRHARFTILTPSEKDYFTGGPCEFEVKDL 73 (325)
T ss_dssp CEEEEESTTT-TTTCCEEEC-SEE---EEEESSCCCB--TTEEECCCTTSCSSCEEEEECCCCHHHHHHCCCCCEEEEEC
T ss_pred CcEEeccCcc-CCCeEEEec-CCe---EEECCCCCcc--CceeecCCCCccccceEEEEecccccccccCCcceEEEEEC
Confidence 3999987542 234889999 444 9999998753 1235889999999999998862 37999999
Q ss_pred CCccceeecCCCCceeecCCCCcEEe-CCCCEEEeCCCceEEEEEEE
Q 010723 436 QSEHGTYVTDNEGRRYRVSSNFPARF-RPSDTIEFGSDKKAIFRVKV 481 (502)
Q Consensus 436 ~s~nGt~vn~~~~~~~~~~~~~~~~l-~~gd~i~~g~~~~~~~~~~~ 481 (502)
+|+|||||||+ ++++.. ..| .+||.|+||.. ...|+++-
T Consensus 74 gSknGTfVNGe-----rI~~~~-~~L~~dgd~I~fG~~-~~~fRl~W 113 (325)
T 3huf_A 74 DTKFGTKVNEK-----VVGQNG-DSYKEKDLKIQLGKC-PFTINAYW 113 (325)
T ss_dssp SCSSCEEETTE-----ECCTTC-EEECSSEEEEEETTC-SSCEEEEE
T ss_pred CCCCCEEECCE-----ECCCce-eeecCCCCEEEecCC-cceEEEEE
Confidence 99999999999 997554 455 58999999997 33666654
No 56
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=99.56 E-value=2.1e-14 Score=118.64 Aligned_cols=94 Identities=27% Similarity=0.458 Sum_probs=74.5
Q ss_pred cEEEEecCCCCCcccc--eEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEEe-CCeEEEEEcCCccceee
Q 010723 367 EWFLVPSGSENVVSQP--IYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK-DGAFYLIDLQSEHGTYV 443 (502)
Q Consensus 367 ~~~l~~~~~~~~~~~~--~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~-~~~~~i~d~~s~nGt~v 443 (502)
..+|+...++...... +.|+ . ..+|||.++|| |+|+++.||+.||+|... ++.|+|+|++ +|||||
T Consensus 26 ~PhLvnLn~Dp~~s~~l~y~L~----~-~t~IGR~~~~D-----I~L~~~~Vs~~Ha~I~~~~~g~~~l~dl~-~ngt~V 94 (124)
T 3fm8_A 26 KCFLVNLNADPALNELLVYYLK----E-HTLIGSANSQD-----IQLCGMGILPEHCIIDITSEGQVMLTPQK-NTRTFV 94 (124)
T ss_dssp -CEEEETTCCTTSSCCCEEECC----S-EEEEESSTTCS-----EECCSTTCCSSCEEEEECTTSCEEEEECT-TCCEEE
T ss_pred ccEEEEeCCCCccCceEEEECC----C-CeEECCCCCCC-----EEECCCCeecceEEEEECCCCeEEEEECC-CCCEEE
Confidence 3467776655444333 3333 2 38999999888 999999999999999984 8889999995 799999
Q ss_pred cCCCCceeecCCCCcEEeCCCCEEEeCCCceEEEEEE
Q 010723 444 TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK 480 (502)
Q Consensus 444 n~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~ 480 (502)
||. ++. +++.|++||.|.||... .|+|.
T Consensus 95 NG~-----~V~--~~~~L~~GD~I~lG~~~--~FrFn 122 (124)
T 3fm8_A 95 NGS-----SVS--SPIQLHHGDRILWGNNH--FFRLN 122 (124)
T ss_dssp TTE-----ECC--SCEEECTTCEEEETTTE--EEEEE
T ss_pred CCE-----EcC--CcEECCCCCEEEECCCe--EEEEE
Confidence 999 886 47899999999999862 56664
No 57
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=99.53 E-value=3.7e-14 Score=122.60 Aligned_cols=99 Identities=22% Similarity=0.352 Sum_probs=76.0
Q ss_pred EEEEecCCCCCccc--ceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEEeCC----eEEEEEcCCccce
Q 010723 368 WFLVPSGSENVVSQ--PIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDG----AFYLIDLQSEHGT 441 (502)
Q Consensus 368 ~~l~~~~~~~~~~~--~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~----~~~i~d~~s~nGt 441 (502)
.+|+....+...+. .+.|. .+.++|||.+.. ..|||+|+++.||++||.|.++++ .+++.|++|+|||
T Consensus 39 PhLvnLn~Dp~ls~~lvy~L~----~g~t~IGR~~~~--~~~DI~L~~~~Vs~~H~~i~~~~~~~~~~~~~~d~~S~ngt 112 (154)
T 4ejq_A 39 PHLVNLNEDPLMSECLLYYIK----DGITRVGREDGE--RRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPCEGADT 112 (154)
T ss_dssp CEEEECCCCTTCSSEEEEECC----SEEEEEECSSCS--SCCSEECCCTTCCSEEEEEEEECTTSSSCEEEEEECTTCCE
T ss_pred ceEEEecCCcccCceEEEEeC----CCCEEEcCCCCC--CCCCEEECCCCcccccEEEEEecCCCceeEEEEecCCCCce
Confidence 46666655543322 25566 455999998732 125599999999999999999843 5899999999999
Q ss_pred eecCCCCceeecCCCCcEEeCCCCEEEeCCCceEEEEEEE
Q 010723 442 YVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 481 (502)
Q Consensus 442 ~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~ 481 (502)
||||. ++. +++.|++||+|.||... .|+|.-
T Consensus 113 ~VNG~-----~i~--~~~~L~~GD~I~~G~~~--~Frf~~ 143 (154)
T 4ejq_A 113 YVNGK-----KVT--EPSILRSGNRIIMGKSH--VFRFNH 143 (154)
T ss_dssp EETTE-----ECC--SCEECCTTCEEEETTTE--EEEEEC
T ss_pred EECCE-----EcC--CceECCCCCEEEECCcE--EEEEcC
Confidence 99999 885 46899999999999872 577754
No 58
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.37 E-value=3.6e-13 Score=140.21 Aligned_cols=66 Identities=23% Similarity=0.087 Sum_probs=53.9
Q ss_pred EEeeHHHHHHHHHhccC--CCeEecCCeEEEEEee---CCeEEEEE--c-cC--cEEEeeEEEEecCCCchhhccc
Q 010723 23 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDH---GDKVSVVL--E-NG--QCYAGDLLIGADGIWSKVRKNL 88 (502)
Q Consensus 23 ~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~---~~~v~v~~--~-dg--~~~~adlvVgADG~~S~vR~~l 88 (502)
..+++..|.+.|.+.+. .+.++++++|++++.+ ++.+.|++ . +| .+++||+||+|||.+|.+|+..
T Consensus 161 ~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~~ 236 (497)
T 2bry_A 161 DHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGFT 236 (497)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTTCE
T ss_pred ccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccccccc
Confidence 35788999999988763 4679999999999874 34567777 4 56 5799999999999999999876
No 59
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=99.34 E-value=2.1e-12 Score=99.12 Aligned_cols=67 Identities=18% Similarity=0.262 Sum_probs=58.3
Q ss_pred CCCEEEcCCCCCCCCCceeeeCCccccccceEEEEeCCeEEEEEcCCccc-eeecCCCCceeecCCCCcEEeCCCCE---
Q 010723 391 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHG-TYVTDNEGRRYRVSSNFPARFRPSDT--- 466 (502)
Q Consensus 391 ~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~d~~s~nG-t~vn~~~~~~~~~~~~~~~~l~~gd~--- 466 (502)
...+.|||.+.++ +++++++||+.||.|.+.+.+.++.- |+|| +||||+ ++ .+..|.+||.
T Consensus 20 ~~~~rIGR~~~~~-----l~LddpsVs~~HAti~~~~~G~~~l~--S~nGtVFVNGq-----rv---~~~~I~~gDtI~g 84 (102)
T 3uv0_A 20 DTIYRIGRQKGLE-----ISIADESMELAHATACILRRGVVRLA--ALVGKIFVNDQ-----EE---TVVDIGMENAVAG 84 (102)
T ss_dssp TCCEEEESSTTST-----EECCCTTSCTTCEEEEEEETTEEEEE--ESSSCEEETTE-----EE---SEEEECGGGCBTT
T ss_pred CcEEEEcCCCCCc-----EEECCcccccceEEEEecCCceEEEE--eccCcEEECCE-----Ee---eeEEccCCccccc
Confidence 5669999999998 99999999999999998755455532 9999 599999 88 4789999999
Q ss_pred ---EEeCCC
Q 010723 467 ---IEFGSD 472 (502)
Q Consensus 467 ---i~~g~~ 472 (502)
++||+.
T Consensus 85 ~v~lrFGnv 93 (102)
T 3uv0_A 85 KVKLRFGNV 93 (102)
T ss_dssp EEEEEETTE
T ss_pred EEEEEecCE
Confidence 899998
No 60
>4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A
Probab=99.32 E-value=7.6e-12 Score=101.28 Aligned_cols=95 Identities=16% Similarity=0.260 Sum_probs=79.0
Q ss_pred CcEEEEecCCCCCcccceEEeecCCCCCEEEcCCC-CCCCCCceeeeCCccccccceEEEEeCCeEEEEEcCCccceeec
Q 010723 366 GEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSES-HEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVT 444 (502)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~-~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~d~~s~nGt~vn 444 (502)
..|-+....+. ..+..++|. .+.++||.++ .|| |+|.|+.||+.||+|.+.+++|+|+ +|+||||+|
T Consensus 3 ~~~klrvlsG~-~~G~~l~L~----~~~~~IGs~~~~~D-----LvL~D~~Vs~~H~~L~~~~~g~~L~--~s~ngt~vd 70 (123)
T 4a0e_A 3 GSWVCRFYQGK-HRGVEVELP----HGRCVFGSDPLQSD-----IVLSDSEIAPVHLVLMVDEEGIRLT--DSAEPLLQE 70 (123)
T ss_dssp CCEEEEECSGG-GTTCEEEEC----SEEEEEESCTTTCS-----EECCCTTSCSSCEEEEEETTEEEEE--EESSCCEET
T ss_pred ceEEEEEecCC-CCCcEEEcC----CCcEEECCCCCCCC-----EEEeCCCccceeEEEEECCCeEEEE--eccCCEEEC
Confidence 56766665333 223789999 5669999999 888 9999999999999999999999998 799999999
Q ss_pred CCCCceeecCCCCcEEeCCCCEEEeCCCceEEEEEEEe
Q 010723 445 DNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 482 (502)
Q Consensus 445 ~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~~ 482 (502)
|. ++..+. .|.+|+.+.+|.. .|.+-..
T Consensus 71 G~-----~v~~~~--~L~~g~~l~lG~~---~l~~~~~ 98 (123)
T 4a0e_A 71 GL-----PVPLGT--LLRAGSCLEVGFL---LWTFVAV 98 (123)
T ss_dssp TE-----ECCTTC--BCCTTSCEEETTE---EEEEEET
T ss_pred CE-----Eccccc--ccCCCCEEEEccE---EEEEEcC
Confidence 99 876543 8999999999998 7777654
No 61
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0
Probab=99.25 E-value=6.4e-11 Score=93.29 Aligned_cols=92 Identities=16% Similarity=0.263 Sum_probs=73.4
Q ss_pred EEEEecCCCCCcccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEEe--CCeEEEEEcCCccceeecC
Q 010723 368 WFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVTD 445 (502)
Q Consensus 368 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~~~~~i~d~~s~nGt~vn~ 445 (502)
.+|++..+. ...|.|. .+ ..++|||++.+. | .|..+||.|+.|..+ ++.+.|++++ +|+|+||+
T Consensus 5 c~L~~~~~~---~~~I~L~-~g--~~v~iGR~p~t~-----I--~DkrcSR~h~~L~~~~~~g~v~vk~lg-~Np~~vng 70 (102)
T 3kt9_A 5 CWLVRQDSR---HQRIRLP-HL--EAVVIGRGPETK-----I--TDKKCSRQQVQLKAECNKGYVKVKQVG-VNPTSIDS 70 (102)
T ss_dssp EEEEETTST---TCEEECC-BT--CEEEECSSTTTC-----C--CCTTSCSSCEEEEEETTTTEEEEEECS-SSCCEETT
T ss_pred EEEEecCCC---CCcEEcC-CC--CcEEeccCCccc-----c--ccCcccCcceEEEEecCCCEEEEEECc-CCCCeECC
Confidence 456665422 2678888 33 336789999775 4 589999999999988 5678999995 89999999
Q ss_pred CCCceeecCCCCcEEeCCCCEEEeCCCceEEEEE
Q 010723 446 NEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRV 479 (502)
Q Consensus 446 ~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~ 479 (502)
. ++.++..+.|++||+|.+-.. ...|++
T Consensus 71 ~-----~l~k~~~~~L~~GD~l~Ll~~-~~~~~v 98 (102)
T 3kt9_A 71 V-----VIGKDQEVKLQPGQVLHMVNE-LYPYIV 98 (102)
T ss_dssp E-----ECCBTCEEEECTTCCEEEETT-EEEEEE
T ss_pred E-----EcCCCCeEEeCCCCEEEEccC-CceEEE
Confidence 9 999999999999999999998 334443
No 62
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.14 E-value=8.6e-11 Score=119.75 Aligned_cols=100 Identities=18% Similarity=0.267 Sum_probs=78.5
Q ss_pred cCCcEEEEecCCCCCcccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccc---------cccceEEEEe--CC---e
Q 010723 364 MNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQV---------SKMHARISYK--DG---A 429 (502)
Q Consensus 364 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~v---------Sr~Ha~i~~~--~~---~ 429 (502)
....|..+....... ..+.|. ...++|||.+.|+ ++++++.| ||+||+|.++ +. .
T Consensus 6 ~~~~~g~l~~~~~~~--~~~~l~----~~~~~iGR~~~~~-----~~~~~~~~~~~~~~~~vS~~H~~i~~~~~~~~~~~ 74 (419)
T 3i6u_A 6 TPAPWARLWALQDGF--ANLECV----NDNYWFGRDKSCE-----YCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYI 74 (419)
T ss_dssp CCCCSEEEEECSSSS--CCEEEC----SSEEEEESSTTSS-----EETTCTTGGGCSGGGGSCTTCEEEECCEETTTEEC
T ss_pred cCCCceEeeecCCCC--CceEec----CCCEEecCCCccC-----EEECCcccccccccccccccceEEEEEcCCCCceE
Confidence 344574443333323 578888 5559999999888 99999876 9999999765 22 2
Q ss_pred EEEEEcCCccceeecCCCCceeecCCCCcEEeCCCCEEEeCCCceEEEEEE
Q 010723 430 FYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK 480 (502)
Q Consensus 430 ~~i~d~~s~nGt~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~ 480 (502)
|+|+| .|+||||||+. ++.++...+|.+||.|.||.+....|.+.
T Consensus 75 ~~i~D-~S~nGt~vn~~-----~~~~~~~~~l~~~d~i~~~~~~~~~~~~~ 119 (419)
T 3i6u_A 75 AYIED-HSGNGTFVNTE-----LVGKGKRRPLNNNSEIALSLSRNKVFVFF 119 (419)
T ss_dssp CEEEE-CCSSCEEETTE-----ECCTTCEEECCTTEEEEESSTTCEEEEEE
T ss_pred EEEEE-CCcCCceECcc-----cccCCCcccCCCCCEeeeeccccceEEEe
Confidence 99999 89999999999 99999999999999999999765556554
No 63
>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A*
Probab=99.09 E-value=1e-09 Score=87.27 Aligned_cols=99 Identities=11% Similarity=0.225 Sum_probs=73.3
Q ss_pred cCCcEEEEecCCCCCcccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEEe--CCeEEEEEcCCccce
Q 010723 364 MNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGT 441 (502)
Q Consensus 364 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~~~~~i~d~~s~nGt 441 (502)
.+...+|++..+. . ..|.|. ...+.++|||++.. .+.|..+||+|+.|..+ ++.+.++++ ++|++
T Consensus 6 ~~~~c~L~~~~~~-~--~~I~Lp--~~~g~~viGR~p~t-------~I~DkrcSR~hv~L~ad~~~~~v~vk~l-G~Np~ 72 (110)
T 2brf_A 6 APGRLWLESPPGE-A--PPIFLP--SDGQALVLGRGPLT-------QVTDRKCSRTQVELVADPETRTVAVKQL-GVNPS 72 (110)
T ss_dssp --CEEEEECSTTS-S--CCEECC--STTCCEEECSBTTT-------TBCCTTSCSSCEEEEEETTTTEEEEEEC-SSSCC
T ss_pred cCcEEEEEeCCCC-C--CcEEec--cCCCCEEEcCCCCc-------ccccccceeeeEEEEEecCCCEEEEEEc-ccCCc
Confidence 3444566665522 2 467772 11455999999955 46789999999999876 688999999 57999
Q ss_pred eecCCCCceeecCCCCcEEeCCCCEEEeCCCceEEEEEEE
Q 010723 442 YVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 481 (502)
Q Consensus 442 ~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~ 481 (502)
++||. ++.++..+.|++||+|.|=.. ...|++..
T Consensus 73 ~vng~-----~l~k~~~~~L~~GD~leLl~g-~y~~~v~f 106 (110)
T 2brf_A 73 TTGTQ-----ELKPGLEGSLGVGDTLYLVNG-LHPLTLRW 106 (110)
T ss_dssp EEC-C-----BCCTTCEEEEETTCEEEEETT-EEEEEEEE
T ss_pred EECCE-----EcCCCCEEEecCCCEEEEccC-CeEEEEEe
Confidence 99999 999999999999999998665 22444443
No 64
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.96 E-value=4e-09 Score=103.71 Aligned_cols=200 Identities=11% Similarity=-0.039 Sum_probs=107.3
Q ss_pred HHHHHHHHHhccCCCeEecCCeEEEEEeeCCeEEEEEccCcEEE-eeEEEEecCCCchhhccccC------CCCCcccce
Q 010723 27 RMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYA-GDLLIGADGIWSKVRKNLFG------PQEAIYSGY 99 (502)
Q Consensus 27 R~~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~-adlvVgADG~~S~vR~~l~~------~~~~~~~~~ 99 (502)
...|.+.|.+ ...++++++|++++.++++++|++.+|+... ||+||+|||.+|.+|..... .....|..
T Consensus 109 ~~~l~~~l~~---g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~~- 184 (336)
T 1yvv_A 109 MSAITRAMRG---DMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMDP- 184 (336)
T ss_dssp THHHHHHHHT---TCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEEE-
T ss_pred HHHHHHHHHc---cCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCccc-
Confidence 3445555544 4468999999999999999999999998764 99999999999999965211 12334543
Q ss_pred EEEEEEecCCCCCccccceEEEecCceEEEEE-----eCCCCe-EEEEEEEcC--CCCCCC-CCcchHHHHHHHhhCCCh
Q 010723 100 TCYTGIADFVPADIESVGYRVFLGHKQYFVSS-----DVGAGK-MQWYAFHKE--PAGGVD-GPEGKKERLLKIFEGWCD 170 (502)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----p~~~~~-~~~~~~~~~--~~~~~~-~~~~~~~~l~~~~~~~~~ 170 (502)
++...+.. +.+.......++...+...+++ |...+. ..|++.... ...... .++...+.+.+.+.....
T Consensus 185 -~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg 262 (336)
T 1yvv_A 185 -TWAVALAF-ETPLQTPMQGCFVQDSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELID 262 (336)
T ss_dssp -EEEEEEEE-SSCCSCCCCEEEECSSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCS
T ss_pred -eeEEEEEe-cCCCCCCCCeEEeCCCceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhC
Confidence 22222111 1122222223344444443332 322332 334443321 000011 112233344444443221
Q ss_pred HHHHHHHcCCccceeee----ecccCCCCCcc-cCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhc
Q 010723 171 NVVDLILATDEEAILRR----DIYDRTPIFTW-GRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKK 241 (502)
Q Consensus 171 ~~~~~~~~~~~~~~~~~----~i~~~~~~~~~-~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~ 241 (502)
.. ...........| +.+.......| ..+|++|+|||+|. .|++.|++|+..||+.|.+.++.
T Consensus 263 ~~---~~~p~~~~~~rw~~a~~~~~~~~~~~~~~~~rl~laGDa~~g------~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 263 CT---MPAPVFSLAHRWLYARPAGAHEWGALSDADLGIYVCGDWCLS------GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp SC---CCCCSEEEEEEEEEEEESSCCCCSCEEETTTTEEECCGGGTT------SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CC---CCCCcEEEccccCccCCCCCCCCCeeecCCCCEEEEecCCCC------CCHHHHHHHHHHHHHHHHHHhhh
Confidence 10 000000111222 11111111122 34999999999974 49999999999999999987653
No 65
>1yj5_C 5' polynucleotide kinase-3' phosphatase FHA domai; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: b.26.1.2
Probab=98.93 E-value=1.2e-08 Score=83.95 Aligned_cols=96 Identities=10% Similarity=0.216 Sum_probs=73.0
Q ss_pred CcEEEEecCCCCCcccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEEe--CCeEEEEEcCCccceee
Q 010723 366 GEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYV 443 (502)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~~~~~i~d~~s~nGt~v 443 (502)
+..+|++..+. . ..|.|. ...+.++|||++.. .+.|..+||+|+.|..+ ++.+.|+++ ++|+|+|
T Consensus 8 ~~c~L~p~d~~-~--~~I~Lp--~~~g~vvIGRgPet-------~ItDkRcSR~qv~L~ad~~~g~V~Vk~l-G~NP~~v 74 (143)
T 1yj5_C 8 GRLWLQSPTGG-P--PPIFLP--SDGQALVLGRGPLT-------QVTDRKCSRNQVELIADPESRTVAVKQL-GVNPSTV 74 (143)
T ss_dssp EEEEEECCTTS-C--CCEECC--TTTCEEEECSBTTT-------TBCCSSSCSSCEEEEEETTTTEEEEEEC-SSSCCEE
T ss_pred CeEEEEecCCC-C--CcEEec--cCCCCEEEcCCCcc-------ccccccccceeEEEEEecCCCeEEEEEc-ccCCcEE
Confidence 44566665522 2 467772 11455999999954 56789999999999887 678999999 5699999
Q ss_pred cCCCCceeecCCCCcEEeCCCCEEEeCCCceEEEEEE
Q 010723 444 TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK 480 (502)
Q Consensus 444 n~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~ 480 (502)
|+. +|.++..+.|++||+|.|=.. ...|++.
T Consensus 75 ng~-----~L~k~~~~~L~~GD~LeLl~g-~y~f~V~ 105 (143)
T 1yj5_C 75 GVH-----ELKPGLSGSLSLGDVLYLVNG-LYPLTLR 105 (143)
T ss_dssp TTE-----ECCTTCEEEECTTCEEESSSS-CSEEEEE
T ss_pred CCE-----EecCCCEEEecCCCEEEEecC-CceEEEE
Confidence 999 999999999999999997654 2244444
No 66
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=98.93 E-value=8.6e-09 Score=91.27 Aligned_cols=98 Identities=22% Similarity=0.349 Sum_probs=73.1
Q ss_pred EEEEecCCCCCccc--ceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEEeC-----CeEEEEEcCCccc
Q 010723 368 WFLVPSGSENVVSQ--PIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD-----GAFYLIDLQSEHG 440 (502)
Q Consensus 368 ~~l~~~~~~~~~~~--~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~-----~~~~i~d~~s~nG 440 (502)
.+|+....+...+. .+.|. .+..+|||.+.. ..+||+|..+.|++.||.|..++ +.++|.++ +.+.
T Consensus 69 PhLvnLn~Dp~ls~~l~y~L~----~g~t~VGr~~~~--~~~dI~L~G~~I~~~Hc~i~~~~~~~~~~~vtl~p~-~~a~ 141 (184)
T 4egx_A 69 PHLVNLNEDPLMSECLLYYIK----DGITRVGREDGE--RRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPC-EGAD 141 (184)
T ss_dssp CEEEECCCCTTCSSCSEEECC----SEEEEEECSSSS--SCCSEECCSTTCCSEEEEEEEECCSSCSCEEEEEEC-TTCC
T ss_pred ceEEeccCCcccCceEEEEEC----CCcCcCCCCCcC--CCCeEEECccccccccEEEEEcCCCCceEEEEEeeC-CCCe
Confidence 35666654443332 35666 445999997643 22569999999999999999863 45788886 5688
Q ss_pred eeecCCCCceeecCCCCcEEeCCCCEEEeCCCceEEEEEEE
Q 010723 441 TYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 481 (502)
Q Consensus 441 t~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~ 481 (502)
|||||. +|. .++.|++||.|.||.. . .|+|.-
T Consensus 142 t~VNG~-----~I~--~~~~L~~GDrI~lG~~-h-~Frfn~ 173 (184)
T 4egx_A 142 TYVNGK-----KVT--EPSILRSGNRIIMGKS-H-VFRFNH 173 (184)
T ss_dssp EEETTE-----ECC--SCEECCTTCEEEETTT-E-EEEEEC
T ss_pred EEEcCE-----Ecc--ccEEcCCCCEEEECCC-C-EEEECC
Confidence 999999 886 5789999999999987 2 577754
No 67
>1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2
Probab=98.85 E-value=4.9e-09 Score=84.34 Aligned_cols=97 Identities=10% Similarity=0.203 Sum_probs=72.8
Q ss_pred CcEEEEecCCCCCcccceEEeecCCCCCEEEcCCCCCCCCCceeeeCCccccccceEEEEe--CCeEEEEEcCCccceee
Q 010723 366 GEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYV 443 (502)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~~~~~i~d~~s~nGt~v 443 (502)
...+|++..+. . ..|.|. ...+.++|||.+.. .+.|..+||+|+.|..+ ++.+.|+++ ++|+|+|
T Consensus 15 ~~c~L~~~~~~-~--~~I~Lp--~~~g~~viGRgp~t-------~I~DkrcSR~qv~L~ad~~~~~v~vk~l-G~NP~~v 81 (119)
T 1ujx_A 15 GRLWLQSPTGG-P--PPIFLP--SDGQALVLGRGPLT-------QVTDRKCSRNQVELIADPESRTVAVKQL-GVNPSTV 81 (119)
T ss_dssp CCEEEECCSSS-C--CCCCCC--TTSCCEEESBBTTT-------TBCCTTSCTTSEEEEEETTTTEEEEEEC-SSSCCBS
T ss_pred ceEEEEeCCCC-C--CcEEec--cCCCCEEEcCCCCc-------ccccccccceeEEEEEecCCCEEEEEEc-ccCCcEE
Confidence 34466666522 1 456662 11455999999955 46789999999999887 678999999 4699999
Q ss_pred cCCCCceeecCCCCcEEeCCCCEEEeCCCceEEEEEEE
Q 010723 444 TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 481 (502)
Q Consensus 444 n~~~~~~~~~~~~~~~~l~~gd~i~~g~~~~~~~~~~~ 481 (502)
|+. ++.++..+.|++||.|.|=.. ...|++..
T Consensus 82 ng~-----~l~k~~~~~L~~GD~l~Ll~g-~y~~~v~f 113 (119)
T 1ujx_A 82 GVQ-----ELKPGLSGSLSLGDVLYLVNG-LYPLTLRW 113 (119)
T ss_dssp SSS-----BCCTTCEEEEETTCCCBCBTT-BSCCEEEE
T ss_pred CCE-----EecCCCEEEecCCCEEEEecC-CeEEEEEe
Confidence 999 999999999999999996655 21444443
No 68
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=98.58 E-value=5e-08 Score=90.40 Aligned_cols=68 Identities=19% Similarity=0.192 Sum_probs=57.4
Q ss_pred CEEEcCCCCCCCCCceeeeCCccccccceEEEEe--C--CeEEEEEcCCccce-eecCCCCceeecCCCCcEEeC-CCCE
Q 010723 393 PYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--D--GAFYLIDLQSEHGT-YVTDNEGRRYRVSSNFPARFR-PSDT 466 (502)
Q Consensus 393 ~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~--~~~~i~d~~s~nGt-~vn~~~~~~~~~~~~~~~~l~-~gd~ 466 (502)
.++|||.+.|+ |+++++ + |+.+.++ + +.|+|+|++|+||| ||||. ++. ....|+ .||.
T Consensus 93 ~itIG~~~~~d-----I~l~~~-~---~~~~~~~~~~~~~~~~l~~l~s~ngtvyvNg~-----~i~--~~~~L~~~GD~ 156 (238)
T 1wv3_A 93 TMTIGPNAYDD-----MVIQSL-M---NAIIIKDFQSIQESQYVRIVHDKNTDVYINYE-----LQE--QLTNKAYIGDH 156 (238)
T ss_dssp EEEEESSTTSS-----EECTTC-S---SCEEEECGGGHHHHCEEEEECCTTCCEEETTE-----ECC--SSEEEEETTCE
T ss_pred eEEEeCCCCCe-----EEeCCC-e---eEEEEecccCcCCcEEEEEccCCCCCEEECCE-----Eec--cceeccCCcCE
Confidence 69999999988 999888 3 6877777 3 58999999999996 99998 886 356899 9999
Q ss_pred EEeCCCceEEEEE
Q 010723 467 IEFGSDKKAIFRV 479 (502)
Q Consensus 467 i~~g~~~~~~~~~ 479 (502)
|.||.. .|++
T Consensus 157 I~ig~~---~~~~ 166 (238)
T 1wv3_A 157 IYVEGI---WLEV 166 (238)
T ss_dssp EEETTE---EEEE
T ss_pred EEECCE---EEEE
Confidence 999987 4544
No 69
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.11 E-value=7.1e-06 Score=81.82 Aligned_cols=194 Identities=12% Similarity=0.037 Sum_probs=106.9
Q ss_pred EEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch-hhcccc-CCCCCcccc
Q 010723 23 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK-VRKNLF-GPQEAIYSG 98 (502)
Q Consensus 23 ~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~-vR~~l~-~~~~~~~~~ 98 (502)
..++...|.+.|.+.+. .+.++++++|++++.+++++.|++.+| +++||.||.|+|..|. +.+.+. ...-....+
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~~~~~~~~g 237 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLGLNNAFLPVKG 237 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTTCCCCCEEEEE
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcCCCCceeccce
Confidence 45667888888888763 367899999999998888888888777 8999999999999986 666542 111111112
Q ss_pred eEEEEEEecCCCCCccccceEEEecCceEEEEEeCCCCeEEEEEEEcCCCCCCCCCcchHHHHHHHhhCCChHHHHHHHc
Q 010723 99 YTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILA 178 (502)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 178 (502)
... .......... ..++ ..+ .++.|..++.+.+..................+.+.+.+..+.|.+. .
T Consensus 238 ~~~---~~~~~~~~~~---~~~~-~~~--~~~~p~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~----~ 304 (382)
T 1ryi_A 238 ECL---SVWNDDIPLT---KTLY-HDH--CYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPAIQ----N 304 (382)
T ss_dssp EEE---EEECCSSCCC---SEEE-ETT--EEEEECTTSEEEEECCCEETCCCCSCCHHHHHHHHHHHHHHCGGGG----G
T ss_pred EEE---EECCCCCCcc---ceEE-cCC--EEEEEcCCCeEEEeecccccCCCCCCCHHHHHHHHHHHHHhCCCcC----C
Confidence 111 1111111111 1122 222 2334555565544332111111111122233444444444333221 1
Q ss_pred CCccceeeeecccCCCCCcccCCCEEEEcCCc-----cccCCCchhhhhHHHHHHHHHHHHHHH
Q 010723 179 TDEEAILRRDIYDRTPIFTWGRGRVTLLGDSV-----HAMQPNLGQGGCMAIEDGYQLAVELEK 237 (502)
Q Consensus 179 ~~~~~~~~~~i~~~~~~~~~~~grvvLvGDAA-----H~~~P~~GqG~n~al~Da~~La~~L~~ 237 (502)
.. ....|. ....+..++..++|++. +...+++|.|+.+|...|..|++.|..
T Consensus 305 ~~--~~~~w~-----g~~~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 305 MK--VDRFWA-----GLRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp SE--EEEEEE-----EEEEECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred Cc--eeeEEE-----EecccCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 11 011111 11123456677888763 446788999999999999988888753
No 70
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.87 E-value=0.00012 Score=73.52 Aligned_cols=63 Identities=16% Similarity=0.133 Sum_probs=49.3
Q ss_pred eeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCe-EEEEEccCcEEEeeEEEEecCCCc-hhhccc
Q 010723 25 ISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLIGADGIWS-KVRKNL 88 (502)
Q Consensus 25 i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~-v~v~~~dg~~~~adlvVgADG~~S-~vR~~l 88 (502)
++-..+.+.|.+.+. .+.++++++|++++.+++. +.|++.+| +++||.||.|+|.+| .+++.+
T Consensus 171 ~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~ 237 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMA 237 (405)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHc
Confidence 445577777777653 4678999999999987665 45777777 799999999999998 677655
No 71
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.72 E-value=0.00015 Score=72.17 Aligned_cols=64 Identities=13% Similarity=0.219 Sum_probs=52.0
Q ss_pred EeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEE-EEEccCcEEEeeEEEEecCCCc-hhhccc
Q 010723 24 VISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWS-KVRKNL 88 (502)
Q Consensus 24 ~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~-v~~~dg~~~~adlvVgADG~~S-~vR~~l 88 (502)
.++...+.+.|.+.+. .+.++++++|++++.++++++ |++.+| +++||.||.|+|.+| .+.+.+
T Consensus 145 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~ 212 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMA 212 (382)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHH
T ss_pred eECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHc
Confidence 4677788888887663 367899999999998888887 888777 899999999999998 455544
No 72
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.58 E-value=0.00052 Score=73.87 Aligned_cols=64 Identities=13% Similarity=0.091 Sum_probs=54.6
Q ss_pred CeEEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 20 PVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 20 p~~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
|.+..++...+.+.|.+.+. .+.++++++|++++.+++++.|++.+|.+++||.||.|+|..|.
T Consensus 409 p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 409 PQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp TTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGG
T ss_pred cCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchh
Confidence 33556777888888888663 46799999999999999999999989889999999999999986
No 73
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.54 E-value=0.00081 Score=66.85 Aligned_cols=60 Identities=25% Similarity=0.367 Sum_probs=49.5
Q ss_pred EEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 23 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 23 ~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
..++...+.+.|.+.+. .+.++++++|++++.+++++.|++.+| +++||.||.|+|..|.
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 145 GVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNS 206 (389)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHH
T ss_pred cEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHH
Confidence 45666788888888763 367899999999998877888887666 7999999999999875
No 74
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.41 E-value=0.00054 Score=73.92 Aligned_cols=64 Identities=13% Similarity=0.058 Sum_probs=52.6
Q ss_pred CeEEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCc-EEEeeEEEEecCCCch
Q 010723 20 PVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQ-CYAGDLLIGADGIWSK 83 (502)
Q Consensus 20 p~~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~-~~~adlvVgADG~~S~ 83 (502)
|.+..++-..|.+.|.+.+. .+.++++++|++++.+++++.|++.+|. +++||.||.|+|..|.
T Consensus 404 p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 404 PAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp TTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred cCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchh
Confidence 33445677888888887663 4679999999999998888999998887 8999999999999975
No 75
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.30 E-value=0.0039 Score=61.12 Aligned_cols=67 Identities=10% Similarity=0.169 Sum_probs=53.8
Q ss_pred EEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCe-EEEEEccC--cEEEeeEEEEecCCCc-hhhccc
Q 010723 22 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDK-VSVVLENG--QCYAGDLLIGADGIWS-KVRKNL 88 (502)
Q Consensus 22 ~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~-v~v~~~dg--~~~~adlvVgADG~~S-~vR~~l 88 (502)
...++...+.+.|.+.+. .++++++++|++++.++++ +.|++.+| .+++||.||.|+|.+| .+.+.+
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~ 216 (369)
T 3dme_A 144 TGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRI 216 (369)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTE
T ss_pred CEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHh
Confidence 345777888888888763 3679999999999988765 88888888 4899999999999998 444444
No 76
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.30 E-value=0.0012 Score=65.20 Aligned_cols=66 Identities=17% Similarity=0.304 Sum_probs=54.3
Q ss_pred EEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch-hhccc
Q 010723 22 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK-VRKNL 88 (502)
Q Consensus 22 ~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~-vR~~l 88 (502)
+..++-..+.+.|.+.+. .+.++++++|++++.+++++.|++.+| +++||.||.|+|.+|. +.+.+
T Consensus 148 ~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~ 216 (381)
T 3nyc_A 148 GADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLA 216 (381)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHH
T ss_pred CceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHh
Confidence 456777888888888763 367899999999999888888888887 8999999999999984 44444
No 77
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.20 E-value=0.0044 Score=64.03 Aligned_cols=207 Identities=11% Similarity=0.003 Sum_probs=107.2
Q ss_pred EeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEc---cCc--EEEeeEEEEecCCCch-hhcc-ccCCCCC
Q 010723 24 VISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLE---NGQ--CYAGDLLIGADGIWSK-VRKN-LFGPQEA 94 (502)
Q Consensus 24 ~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~---dg~--~~~adlvVgADG~~S~-vR~~-l~~~~~~ 94 (502)
.++...|...|.+.+. .+.++.+++|+++..+++.+.|++. +|+ +++||.||.|+|..|. +++. +......
T Consensus 145 ~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~~ 224 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPY 224 (501)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCSS
T ss_pred EEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCccc
Confidence 4788889999888763 3678999999999988776667774 565 7999999999999986 4553 3211111
Q ss_pred cccceEEEEEEecCCCCCccccceEEE-ecCceEEEEEeCCCCeEEEEEEEc-CC--CCCCCCCcchHHHHHHHhhCCCh
Q 010723 95 IYSGYTCYTGIADFVPADIESVGYRVF-LGHKQYFVSSDVGAGKMQWYAFHK-EP--AGGVDGPEGKKERLLKIFEGWCD 170 (502)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~l~~~~~~~~~ 170 (502)
..........+++ .........++ ..++..+++.|..++.+.+..... .. ...........+.+++....+.|
T Consensus 225 ~i~p~rG~~~~~~---~~~~~~~~~~~~~~dg~~~~~~P~~~g~~~iG~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p 301 (501)
T 2qcu_A 225 GIRLIKGSHIVVP---RVHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLNVYNTHFK 301 (501)
T ss_dssp CBCCEEEEEEEEE---CSSSCSCEEEEECTTSCEEEEEEETTTEEEEECCCEECCSCGGGCCCCHHHHHHHHHHHHHHBS
T ss_pred ccccceeEEEEEC---CCCCCceEEEeecCCCCEEEEEEcCCCcEEEcCCCCCCCCCcCCCCCCHHHHHHHHHHHHHhcC
Confidence 1111111111121 11111111122 124455555676655443322111 00 00111112233444443333222
Q ss_pred HHHHHHHcCCcccee-ee----eccc-CCC-CCcccCCCEEE--EcCCccccCCCchhhhhHHHHHHHHHHHHHHHhh
Q 010723 171 NVVDLILATDEEAIL-RR----DIYD-RTP-IFTWGRGRVTL--LGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKAC 239 (502)
Q Consensus 171 ~~~~~~~~~~~~~~~-~~----~i~~-~~~-~~~~~~grvvL--vGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~ 239 (502)
. ......+. .| ++.. ..+ ......+.++. .++..|.+..++|.|+..+-.=|..+++.+.+.+
T Consensus 302 ~------~l~~~~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~~~~Ae~~~~~~~~~~ 373 (501)
T 2qcu_A 302 K------QLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYY 373 (501)
T ss_dssp S------CCCGGGCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECCCGGGHHHHHHHHHHHHGGGS
T ss_pred C------CCCcccEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCccccchHHHHHHHHHHHHHhh
Confidence 0 11111111 11 1111 011 11223456776 6777788888888888887777777777776554
No 78
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.06 E-value=0.011 Score=58.95 Aligned_cols=65 Identities=18% Similarity=0.204 Sum_probs=52.1
Q ss_pred EEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCC-chhhccc
Q 010723 23 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW-SKVRKNL 88 (502)
Q Consensus 23 ~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~-S~vR~~l 88 (502)
..++...+.+.|.+.+. .+.++++++|++++.++++++|+..+| +++||.||.|+|.+ +.+++.+
T Consensus 148 g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~ 215 (397)
T 2oln_A 148 GTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPL 215 (397)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGG
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhc
Confidence 35677778888887653 367899999999998888888877665 79999999999998 4566655
No 79
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.05 E-value=0.015 Score=59.72 Aligned_cols=60 Identities=20% Similarity=0.285 Sum_probs=41.8
Q ss_pred HHHHHHHhccC--CCeEecCCeEEEEEeeCCeEE-EEEccCcEEEeeEEEEecCCCchhhccc
Q 010723 29 TLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSKVRKNL 88 (502)
Q Consensus 29 ~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~-v~~~dg~~~~adlvVgADG~~S~vR~~l 88 (502)
.|-+.|.+.+. .++|+++++|++|+.++++++ |+++||+++.||.||.+=+.....++.+
T Consensus 222 ~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLL 284 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---------
T ss_pred chHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhc
Confidence 45566666553 367999999999999998877 8999999999999997666665666554
No 80
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.90 E-value=0.029 Score=56.89 Aligned_cols=56 Identities=20% Similarity=0.209 Sum_probs=48.1
Q ss_pred HHHHHHHhccCCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
.|.+.|.+.+....++++++|++|+.++++++|++.+|++++||.||.|-......
T Consensus 236 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~ 291 (470)
T 3i6d_A 236 TLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAA 291 (470)
T ss_dssp HHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHH
T ss_pred HHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHH
Confidence 67777777776567999999999999888999999999999999999999877643
No 81
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=96.29 E-value=0.0035 Score=54.89 Aligned_cols=62 Identities=18% Similarity=0.073 Sum_probs=50.6
Q ss_pred eeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchhhccc
Q 010723 25 ISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVRKNL 88 (502)
Q Consensus 25 i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR~~l 88 (502)
+....+.+.|.+.+. .+.++++ +|++++.+++++.+++++| ++++|+||.|+|.+|.+++.+
T Consensus 53 ~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~~~~ 116 (180)
T 2ywl_A 53 PSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTLPSLL 116 (180)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCccccC
Confidence 345677777777653 3678888 9999998877888998888 899999999999999876655
No 82
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=96.14 E-value=0.057 Score=54.57 Aligned_cols=66 Identities=17% Similarity=0.318 Sum_probs=51.4
Q ss_pred EEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEe---------------eCCeE-EEEEccCcEE--EeeEEEEecCCC
Q 010723 22 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKD---------------HGDKV-SVVLENGQCY--AGDLLIGADGIW 81 (502)
Q Consensus 22 ~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~---------------~~~~v-~v~~~dg~~~--~adlvVgADG~~ 81 (502)
...++...+.+.|.+.+. .++++++++|++++. +++++ .|.+.+| ++ +||.||.|.|..
T Consensus 175 ~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 175 AGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGG
T ss_pred CeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcC
Confidence 455777788888888763 367899999999987 55555 5777777 68 999999999999
Q ss_pred ch-hhccc
Q 010723 82 SK-VRKNL 88 (502)
Q Consensus 82 S~-vR~~l 88 (502)
|. +.+.+
T Consensus 254 s~~l~~~~ 261 (448)
T 3axb_A 254 SNRLLNPL 261 (448)
T ss_dssp HHHHHGGG
T ss_pred HHHHHHHc
Confidence 86 55544
No 83
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=96.12 E-value=0.009 Score=54.79 Aligned_cols=62 Identities=15% Similarity=0.115 Sum_probs=50.1
Q ss_pred eHHHHHHHHHhccC---CCeEecCCeEEEEEeeCCeE-EEEEccCcEEEeeEEEEecCCCchhhccc
Q 010723 26 SRMTLQQILAKAVG---DEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDLLIGADGIWSKVRKNL 88 (502)
Q Consensus 26 ~R~~L~~~L~~~~~---~~~v~~~~~v~~i~~~~~~v-~v~~~dg~~~~adlvVgADG~~S~vR~~l 88 (502)
+|..+.+.|.+.+. ...++ +++|+++..+++.+ .|.+.+|++++||+||.|+|.+|..+..+
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~ 131 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFL 131 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceec
Confidence 56788888887663 44566 57999999887775 57888898999999999999999988654
No 84
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.10 E-value=0.0073 Score=60.75 Aligned_cols=57 Identities=16% Similarity=0.121 Sum_probs=49.8
Q ss_pred eeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCc
Q 010723 25 ISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWS 82 (502)
Q Consensus 25 i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S 82 (502)
..+..+.+.|.+.+. .+.++++++|++++.+++++.|++.+| +++||.||.|+|.+|
T Consensus 129 ~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 129 HSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp SCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred CCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 456788888888764 467999999999999888899999888 899999999999999
No 85
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.99 E-value=0.0046 Score=57.26 Aligned_cols=37 Identities=16% Similarity=-0.042 Sum_probs=33.4
Q ss_pred cCCCEEEEcCCccccCCCchhhhhHHHHHHHHHHHHHHHhhhc
Q 010723 199 GRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKK 241 (502)
Q Consensus 199 ~~grvvLvGDAAH~~~P~~GqG~n~al~Da~~La~~L~~~~~~ 241 (502)
..+||+|+|||++ |.|++.||.|+..+|+.|.+.|+.
T Consensus 293 ~~~~v~l~GDa~~------g~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 293 ADLGIYVCGDWCL------SGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TTTTEEECCGGGT------TSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEecccC------CcCHHHHHHHHHHHHHHHHHHhhc
Confidence 5789999999964 789999999999999999999875
No 86
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=95.94 E-value=0.013 Score=59.41 Aligned_cols=56 Identities=16% Similarity=0.157 Sum_probs=47.5
Q ss_pred HHHHHHHHHhccC--CCeEecCCeEEEEEeeCCe-EEEEEccCcEEEeeEEEEecCCCc
Q 010723 27 RMTLQQILAKAVG--DEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLIGADGIWS 82 (502)
Q Consensus 27 R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~-v~v~~~dg~~~~adlvVgADG~~S 82 (502)
...+.+.|.+.+. .++++++++|+++..+++. +.|++.+|++++||.||.|+|..|
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 4677778877663 4679999999999987776 678888898899999999999999
No 87
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=95.53 E-value=0.02 Score=59.56 Aligned_cols=58 Identities=17% Similarity=0.175 Sum_probs=47.7
Q ss_pred eHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEE-EEEccCcEEEeeEEEEecCCCch
Q 010723 26 SRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 26 ~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~-v~~~dg~~~~adlvVgADG~~S~ 83 (502)
....+.+.|.+.+. .++++++++|++++.+++.+. |++.+|++++||+||.|||.+|.
T Consensus 218 ~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 218 KLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred hHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 34566777776652 477999999999998877655 88999999999999999999995
No 88
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=95.42 E-value=0.027 Score=56.81 Aligned_cols=61 Identities=10% Similarity=0.083 Sum_probs=51.9
Q ss_pred EEeeHHHHHHHHHhccC--CCeEecCC---eEEEEEeeCCeEE-EEEccCcEEEeeEEEEecCCCch
Q 010723 23 RVISRMTLQQILAKAVG--DEIILNES---NVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 23 ~~i~R~~L~~~L~~~~~--~~~v~~~~---~v~~i~~~~~~v~-v~~~dg~~~~adlvVgADG~~S~ 83 (502)
..++-..+.+.|.+.+. .+++++++ +|++|..++++++ |++.+|++++||.||.|+|.+|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 45566688888887763 47799999 9999999888888 99999989999999999999985
No 89
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=95.38 E-value=0.21 Score=49.72 Aligned_cols=57 Identities=14% Similarity=0.149 Sum_probs=44.8
Q ss_pred HHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEE-EEEccCcEEEeeEEEEecCCCchhh
Q 010723 28 MTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 28 ~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~-v~~~dg~~~~adlvVgADG~~S~vR 85 (502)
..|.+.|.+.+. .++++++++|++|+.++++++ |++ +|++++||.||-|=|.....+
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAATAV 255 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHHHH
Confidence 356667776653 367999999999999888877 655 588999999999998876643
No 90
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=95.32 E-value=0.026 Score=57.26 Aligned_cols=62 Identities=16% Similarity=0.115 Sum_probs=50.5
Q ss_pred EeeHHHHHHHHHhccCC--CeEecCCeEEEEEeeCCeEEEEEcc---Cc---EEEeeEEEEecCCCchhh
Q 010723 24 VISRMTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLEN---GQ---CYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 24 ~i~R~~L~~~L~~~~~~--~~v~~~~~v~~i~~~~~~v~v~~~d---g~---~~~adlvVgADG~~S~vR 85 (502)
.+++..+.+.|.+.+.. ..++++++|++++.+++.++|++.+ |+ ++.+|.||.|+|.+|.-+
T Consensus 111 ~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~ 180 (447)
T 2gv8_A 111 FPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPY 180 (447)
T ss_dssp SCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSBC
T ss_pred CCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCCC
Confidence 35688888888776543 4588999999999888888888876 76 799999999999988644
No 91
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=95.25 E-value=0.056 Score=51.07 Aligned_cols=63 Identities=11% Similarity=0.164 Sum_probs=48.7
Q ss_pred eHHHHHHHHHhcc-C--CCeEecCCeEEEEEeeCCeE-EEEEc---------cC-----cEEEeeEEEEecCCCchhhcc
Q 010723 26 SRMTLQQILAKAV-G--DEIILNESNVIDFKDHGDKV-SVVLE---------NG-----QCYAGDLLIGADGIWSKVRKN 87 (502)
Q Consensus 26 ~R~~L~~~L~~~~-~--~~~v~~~~~v~~i~~~~~~v-~v~~~---------dg-----~~~~adlvVgADG~~S~vR~~ 87 (502)
++..+...|.+++ . .+.++++++|+++..+++.+ .+.+. +| .+++||.||.|+|.+|.++..
T Consensus 117 ~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~ 196 (284)
T 1rp0_A 117 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGAT 196 (284)
T ss_dssp CHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHH
Confidence 7788888888765 2 36789999999999877754 23332 32 579999999999999999876
Q ss_pred c
Q 010723 88 L 88 (502)
Q Consensus 88 l 88 (502)
.
T Consensus 197 ~ 197 (284)
T 1rp0_A 197 G 197 (284)
T ss_dssp H
T ss_pred H
Confidence 5
No 92
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=95.23 E-value=0.21 Score=50.75 Aligned_cols=54 Identities=11% Similarity=0.062 Sum_probs=45.7
Q ss_pred HHHHHHHhccCCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 29 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 29 ~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
.|.+.|.+.+....|+++++|++|+.++++++|++.+| +++||.||-|=+....
T Consensus 237 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~ 290 (475)
T 3lov_A 237 SLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQV 290 (475)
T ss_dssp HHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHH
T ss_pred HHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHH
Confidence 56777777776567999999999999999999999999 8999999999877543
No 93
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=95.22 E-value=0.0073 Score=60.47 Aligned_cols=66 Identities=15% Similarity=0.070 Sum_probs=47.8
Q ss_pred EEEeeHHHHHHHHHhccC--CCeEecCCeEE---------EEEeeCCeEEEEEccCcEEEeeEEEEecCCCc-hhhc-cc
Q 010723 22 TRVISRMTLQQILAKAVG--DEIILNESNVI---------DFKDHGDKVSVVLENGQCYAGDLLIGADGIWS-KVRK-NL 88 (502)
Q Consensus 22 ~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~---------~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S-~vR~-~l 88 (502)
...++...|.+.|.+.+. .+.++++++|+ +++.+++.+.|++.+| +++||.||.|+|.+| .+++ .+
T Consensus 166 ~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~ 244 (405)
T 3c4n_A 166 ALTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGL 244 (405)
T ss_dssp CEEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHH
T ss_pred CEEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhc
Confidence 346778889999988763 36788999999 8887777776766666 899999999999999 6777 55
No 94
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=95.09 E-value=0.046 Score=53.39 Aligned_cols=64 Identities=14% Similarity=0.222 Sum_probs=51.9
Q ss_pred eeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCC-eEEEEEccCcEEEeeEEEEecCCCchhhccc
Q 010723 25 ISRMTLQQILAKAVG--DEIILNESNVIDFKDHGD-KVSVVLENGQCYAGDLLIGADGIWSKVRKNL 88 (502)
Q Consensus 25 i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~-~v~v~~~dg~~~~adlvVgADG~~S~vR~~l 88 (502)
+.+..+.+.|.+.+. ...++++++|++++.+++ .++|++.+|+++++|.||.|+|.+|..++.+
T Consensus 71 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~ 137 (360)
T 3ab1_A 71 VPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKL 137 (360)
T ss_dssp EEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCC
T ss_pred CCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCC
Confidence 467788888877653 356888999999998765 6888999998999999999999998766554
No 95
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=95.07 E-value=0.17 Score=52.84 Aligned_cols=65 Identities=22% Similarity=0.264 Sum_probs=51.4
Q ss_pred EeeHHHHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEE-EEEcc---C--cEEEeeEEEEecCCCc-hhhccc
Q 010723 24 VISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLEN---G--QCYAGDLLIGADGIWS-KVRKNL 88 (502)
Q Consensus 24 ~i~R~~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~-v~~~d---g--~~~~adlvVgADG~~S-~vR~~l 88 (502)
.++...|...|.+.+ ..+.++++++|+++..+++++. |++.| | .+++||.||.|+|..| .+++.+
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~ 239 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKD 239 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTT
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhc
Confidence 677788888888765 3467899999999998887753 66654 4 4799999999999999 667765
No 96
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=94.96 E-value=0.22 Score=49.76 Aligned_cols=55 Identities=20% Similarity=0.277 Sum_probs=44.2
Q ss_pred HHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 28 MTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 28 ~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
..|-+.|.+.+. .++++++++|++|+.+++++ | ..+|++++||.||-|=|.....
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~ 245 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETV 245 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHH
Confidence 356667776653 36899999999999888888 5 5678899999999999987654
No 97
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=94.82 E-value=0.057 Score=52.89 Aligned_cols=61 Identities=16% Similarity=0.224 Sum_probs=49.3
Q ss_pred EEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 22 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 22 ~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
...++...+.+.|.+.+. .+.++++++|++++.+++++.|++.+| +++||.||.|+|..|.
T Consensus 143 ~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 143 SGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGG
T ss_pred CcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHH
Confidence 345566778888877653 367899999999998877888888877 4999999999999874
No 98
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=94.61 E-value=0.074 Score=51.23 Aligned_cols=64 Identities=17% Similarity=0.238 Sum_probs=51.3
Q ss_pred eeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchhhccc
Q 010723 25 ISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVRKNL 88 (502)
Q Consensus 25 i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR~~l 88 (502)
+.+..+.+.|.+.+. ...++++++|++++.+++.++|++.+|+++++|.||.|+|.+|...+..
T Consensus 62 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~ 127 (335)
T 2zbw_A 62 VYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRI 127 (335)
T ss_dssp EEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCC
Confidence 456777777776553 2567889999999988778888888888999999999999988665544
No 99
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=94.41 E-value=0.05 Score=52.68 Aligned_cols=59 Identities=19% Similarity=0.300 Sum_probs=48.9
Q ss_pred eeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEE-EEEccCcEEEeeEEEEecCCCchh
Q 010723 25 ISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 25 i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~-v~~~dg~~~~adlvVgADG~~S~v 84 (502)
..+..+.+.|.+.+. ...++++++|++++.+++.+. |++.+| ++++|.||.|+|.+|.-
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~ 134 (357)
T 4a9w_A 73 PARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEA 134 (357)
T ss_dssp CBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGB
T ss_pred CCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCC
Confidence 456788888876553 356899999999999999888 888887 89999999999998753
No 100
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=94.26 E-value=0.074 Score=55.29 Aligned_cols=62 Identities=18% Similarity=0.242 Sum_probs=50.7
Q ss_pred EeeHHHHHHHHHhccCC----CeEecCCeEEEEEeeCC--eEEEEEccCcEEEeeEEEEecCCCchhh
Q 010723 24 VISRMTLQQILAKAVGD----EIILNESNVIDFKDHGD--KVSVVLENGQCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 24 ~i~R~~L~~~L~~~~~~----~~v~~~~~v~~i~~~~~--~v~v~~~dg~~~~adlvVgADG~~S~vR 85 (502)
...+..+.+.|.+.+.. ..++++++|++++.+++ .++|++++|++++||.||.|+|..|.-+
T Consensus 83 ~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~ 150 (540)
T 3gwf_A 83 YITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAIN 150 (540)
T ss_dssp EEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBC
T ss_pred CCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCC
Confidence 46788888888775532 25889999999998765 7889999999999999999999987544
No 101
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.11 E-value=0.082 Score=50.28 Aligned_cols=61 Identities=16% Similarity=0.131 Sum_probs=49.6
Q ss_pred EeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchhh
Q 010723 24 VISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 24 ~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR 85 (502)
.+.+..+.+.|.+.+. ...++. ++|++++.+++.+++++.+|+++++|.||.|+|.++.+.
T Consensus 55 ~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 55 VVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp CBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCC
Confidence 4677888888877653 356666 789999988888888888999999999999999877654
No 102
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=94.11 E-value=0.057 Score=53.89 Aligned_cols=57 Identities=18% Similarity=0.130 Sum_probs=46.8
Q ss_pred eHHHHHHHHHhccC--CCeEecCCeEEEEEee----CCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 26 SRMTLQQILAKAVG--DEIILNESNVIDFKDH----GDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 26 ~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~----~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
....+.+.|.+.+. .++++++++|+++..+ ++++.|++.+| +++||.||.|+|.+|.
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCSSC
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCccC
Confidence 56777788877663 3679999999999876 56688888776 7999999999999993
No 103
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=94.02 E-value=0.074 Score=55.36 Aligned_cols=61 Identities=16% Similarity=0.057 Sum_probs=48.4
Q ss_pred eeHHHHHHHHHhcc---C-CCeEecCCeEEEEEeeCC--eEEEEEccCcEEEeeEEEEecCCCchhh
Q 010723 25 ISRMTLQQILAKAV---G-DEIILNESNVIDFKDHGD--KVSVVLENGQCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 25 i~R~~L~~~L~~~~---~-~~~v~~~~~v~~i~~~~~--~v~v~~~dg~~~~adlvVgADG~~S~vR 85 (502)
..+..+.+.|.+.+ . ...++++++|++++.+++ .++|++++|++++||+||.|+|..|.-+
T Consensus 91 ~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~ 157 (542)
T 1w4x_A 91 ASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQ 157 (542)
T ss_dssp CBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCC
Confidence 46777877776543 2 145889999999987653 6889999999999999999999988644
No 104
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=93.76 E-value=0.11 Score=54.69 Aligned_cols=66 Identities=17% Similarity=0.229 Sum_probs=52.7
Q ss_pred EEEeeHHHHHHHHHhccC---CCeEecCCeEEEEEeeCCeE-EEEEccCcEEEeeEEEEecCCCchhhccc
Q 010723 22 TRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDLLIGADGIWSKVRKNL 88 (502)
Q Consensus 22 ~~~i~R~~L~~~L~~~~~---~~~v~~~~~v~~i~~~~~~v-~v~~~dg~~~~adlvVgADG~~S~vR~~l 88 (502)
...+++..+.+.|.+.+. ++.+ ++++|+++..+++.+ .|.+.+|.+++||.||.|+|.+|..+...
T Consensus 118 r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~i~ 187 (651)
T 3ces_A 118 RAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHI 187 (651)
T ss_dssp EEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCCEEEC
T ss_pred hhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccCcccc
Confidence 457888899988888763 3556 567999998777765 57888898999999999999999877643
No 105
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=93.42 E-value=0.14 Score=53.58 Aligned_cols=64 Identities=16% Similarity=0.105 Sum_probs=49.3
Q ss_pred eeHHHHHHHHHhccC--CCeEecCCeEEEEEeeC-CeEE-EEE--ccCc--EEEeeEEEEecCCCchhhccc
Q 010723 25 ISRMTLQQILAKAVG--DEIILNESNVIDFKDHG-DKVS-VVL--ENGQ--CYAGDLLIGADGIWSKVRKNL 88 (502)
Q Consensus 25 i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~-~~v~-v~~--~dg~--~~~adlvVgADG~~S~vR~~l 88 (502)
+....|.+.|.+.+. .+.++++++|+++..++ +.|. |++ .+|+ +++||.||.|+|..|..|+.+
T Consensus 247 ~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 247 SSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 346678888887663 46799999999998877 6543 444 4675 689999999999999987765
No 106
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=93.37 E-value=0.21 Score=52.52 Aligned_cols=65 Identities=17% Similarity=0.178 Sum_probs=52.3
Q ss_pred eEEEeeHHHHHHHHHhccC---CCeEecCCeEEEEEeeCCeEE-EEEccCcEEEeeEEEEecCCCchhhc
Q 010723 21 VTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSKVRK 86 (502)
Q Consensus 21 ~~~~i~R~~L~~~L~~~~~---~~~v~~~~~v~~i~~~~~~v~-v~~~dg~~~~adlvVgADG~~S~vR~ 86 (502)
....++|..+.+.|.+.+. ++.++ ..+|+++..+++.+. |.+.+|.+++||.||.|+|.+|..+-
T Consensus 110 ~r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~~i 178 (641)
T 3cp8_A 110 PRAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLNGLI 178 (641)
T ss_dssp EEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBTCEE
T ss_pred hhhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCCccc
Confidence 3457899999999888763 45564 568999988888877 88889999999999999999987543
No 107
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=93.21 E-value=0.19 Score=48.67 Aligned_cols=65 Identities=12% Similarity=0.105 Sum_probs=46.7
Q ss_pred EeeHHHHHHHHHhcc---CCCeEecCCeEEEEEeeCC-------------------e---EEEEEc------------cC
Q 010723 24 VISRMTLQQILAKAV---GDEIILNESNVIDFKDHGD-------------------K---VSVVLE------------NG 66 (502)
Q Consensus 24 ~i~R~~L~~~L~~~~---~~~~v~~~~~v~~i~~~~~-------------------~---v~v~~~------------dg 66 (502)
..+..++.+.|.+.+ .++.++++++++++..+++ . |.+... ++
T Consensus 156 ~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~ 235 (344)
T 3jsk_A 156 VKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDP 235 (344)
T ss_dssp ESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBC
T ss_pred EecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCc
Confidence 344677778888765 2467899999999976652 2 223221 23
Q ss_pred cEEEeeEEEEecCCCchhhccc
Q 010723 67 QCYAGDLLIGADGIWSKVRKNL 88 (502)
Q Consensus 67 ~~~~adlvVgADG~~S~vR~~l 88 (502)
.+++|++||.|+|..|++++.+
T Consensus 236 ~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 236 NTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp EEEECSEEEECCCSSSSSSCHH
T ss_pred eEEEcCEEEECCCCCchhhHHH
Confidence 4799999999999999988766
No 108
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=92.66 E-value=0.21 Score=52.41 Aligned_cols=65 Identities=14% Similarity=0.176 Sum_probs=52.5
Q ss_pred EEEeeHHHHHHHHHhccC---CCeEecCCeEEEEEeeCCeEE-EEEccCcEEEeeEEEEecCCCchhhcc
Q 010723 22 TRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSKVRKN 87 (502)
Q Consensus 22 ~~~i~R~~L~~~L~~~~~---~~~v~~~~~v~~i~~~~~~v~-v~~~dg~~~~adlvVgADG~~S~vR~~ 87 (502)
...++|..+.+.|.+.+. ++.+ ++++|+++..+++.+. |.+.+|.++.|+.||.|+|.+|..+..
T Consensus 117 r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~~~ 185 (637)
T 2zxi_A 117 RAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVIY 185 (637)
T ss_dssp EEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTCEEE
T ss_pred hhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccCcee
Confidence 457889999999888763 3556 5679999988777664 888899999999999999999887654
No 109
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=92.51 E-value=0.17 Score=49.86 Aligned_cols=57 Identities=14% Similarity=0.236 Sum_probs=46.0
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchhh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR 85 (502)
.+.+.|.+.+ ..+.++++++|++++.+++++.+++++|+++++|+||.|.|..+...
T Consensus 188 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~ 246 (384)
T 2v3a_A 188 AAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTE 246 (384)
T ss_dssp HHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCH
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCHH
Confidence 4455555544 23678999999999988888899999999999999999999987653
No 110
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=92.16 E-value=0.15 Score=48.87 Aligned_cols=58 Identities=19% Similarity=0.182 Sum_probs=46.3
Q ss_pred eeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 25 ISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 25 i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
+.+..+.+.|.+.+. ...++.++ |++++.+++.++|++ +|.++++|.||.|+|.+|..
T Consensus 67 ~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 67 ILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCC
Confidence 567788888877653 35677876 889988777788877 78899999999999998754
No 111
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=92.14 E-value=0.18 Score=52.46 Aligned_cols=61 Identities=15% Similarity=0.144 Sum_probs=48.5
Q ss_pred eeHHHHHHHHHhccCC----CeEecCCeEEEEEeeCC--eEEEEEccCcEEEeeEEEEecCCCchhh
Q 010723 25 ISRMTLQQILAKAVGD----EIILNESNVIDFKDHGD--KVSVVLENGQCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 25 i~R~~L~~~L~~~~~~----~~v~~~~~v~~i~~~~~--~v~v~~~dg~~~~adlvVgADG~~S~vR 85 (502)
..+..+.+.|.+.+.. ..++++++|++++.+++ .++|++++|++++||+||.|+|..|.-+
T Consensus 96 ~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~ 162 (549)
T 4ap3_A 96 ATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNAN 162 (549)
T ss_dssp CBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCC
Confidence 4677788777765421 25889999999987765 7889999999999999999999876433
No 112
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=91.63 E-value=3.4 Score=41.97 Aligned_cols=57 Identities=14% Similarity=0.132 Sum_probs=44.1
Q ss_pred HHHHHHHHhccCCCeEecCCeEEEEEeeCCe------EEEEEc--cC---cEEEeeEEEEecCCCchh
Q 010723 28 MTLQQILAKAVGDEIILNESNVIDFKDHGDK------VSVVLE--NG---QCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 28 ~~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~------v~v~~~--dg---~~~~adlvVgADG~~S~v 84 (502)
..|-+.|.+.++...|+++++|++|+.++++ +.|++. +| ++++||.||.|-......
T Consensus 243 ~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~ 310 (504)
T 1sez_A 243 QTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVK 310 (504)
T ss_dssp HHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHH
T ss_pred HHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHH
Confidence 3567777777764569999999999988776 777775 45 578999999998876443
No 113
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=91.62 E-value=0.29 Score=51.13 Aligned_cols=62 Identities=15% Similarity=0.147 Sum_probs=46.9
Q ss_pred HHHHHHHHHhccC--CCeEecCCeEEEEEeeC-CeEE-EEEc--cCc--EEEeeEEEEecCCCchhhccc
Q 010723 27 RMTLQQILAKAVG--DEIILNESNVIDFKDHG-DKVS-VVLE--NGQ--CYAGDLLIGADGIWSKVRKNL 88 (502)
Q Consensus 27 R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~-~~v~-v~~~--dg~--~~~adlvVgADG~~S~vR~~l 88 (502)
...+.+.|.+.+. .+.++++++|+++..++ +.|. |.+. +|+ +++||.||.|+|..|..+..+
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 254 GAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNERV 323 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHHHH
Confidence 4677788877663 47799999999999876 5433 4433 675 689999999999999866544
No 114
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=91.56 E-value=0.21 Score=50.56 Aligned_cols=57 Identities=16% Similarity=0.143 Sum_probs=45.9
Q ss_pred HHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchhh
Q 010723 29 TLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 29 ~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR 85 (502)
.+.+.|.+.+. .+.++++++|++++.+++++.+++++|+++.+|.||.|.|.++.+.
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~ 267 (455)
T 2yqu_A 209 EVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTE 267 (455)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCT
T ss_pred HHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCCC
Confidence 44555555442 3679999999999988888888888899999999999999987653
No 115
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=91.06 E-value=0.32 Score=46.92 Aligned_cols=51 Identities=16% Similarity=0.105 Sum_probs=41.9
Q ss_pred HHHHHHHhccCCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCC
Q 010723 29 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGI 80 (502)
Q Consensus 29 ~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~ 80 (502)
.+.+.|.+.+ ...++++++|++|+.++++++|++.+|+++++|.||.|-..
T Consensus 113 ~l~~~l~~~~-g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 113 SIIKHYLKES-GAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp HHHHHHHHHH-TCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCH
T ss_pred HHHHHHHHhc-CCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCH
Confidence 4455555554 45799999999999988899999999988999999999764
No 116
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=91.04 E-value=0.31 Score=46.11 Aligned_cols=60 Identities=13% Similarity=0.096 Sum_probs=46.6
Q ss_pred eeHHHHHHHHHhccC--CCeEecCCeEEEEEeeC---CeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 25 ISRMTLQQILAKAVG--DEIILNESNVIDFKDHG---DKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 25 i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~---~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
..+..+.+.|.+.+. ...++.+++|+.++.+. +.++|++++|+++++|.||.|+|.++..
T Consensus 53 ~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 53 TEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp EEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 356677777776553 35688899999997653 3678889899899999999999997643
No 117
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=90.97 E-value=0.29 Score=49.70 Aligned_cols=63 Identities=16% Similarity=0.101 Sum_probs=47.9
Q ss_pred EeeHHHHHHHHHhccC--CCe--EecCCeEEEEEeeCC--eEEEEEcc---C--cEEEeeEEEEecCCCchhhc
Q 010723 24 VISRMTLQQILAKAVG--DEI--ILNESNVIDFKDHGD--KVSVVLEN---G--QCYAGDLLIGADGIWSKVRK 86 (502)
Q Consensus 24 ~i~R~~L~~~L~~~~~--~~~--v~~~~~v~~i~~~~~--~v~v~~~d---g--~~~~adlvVgADG~~S~vR~ 86 (502)
.+++..+.+.|.+.+. ... ++++++|++++..++ .++|++.+ | .++.+|.||.|+|.+|.-+.
T Consensus 97 ~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p~~ 170 (464)
T 2xve_A 97 YPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTPYV 170 (464)
T ss_dssp SCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSSBCC
T ss_pred CCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCCCcc
Confidence 4577888888877553 233 889999999998766 67777765 4 57899999999998776553
No 118
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=90.59 E-value=0.31 Score=50.66 Aligned_cols=61 Identities=20% Similarity=0.170 Sum_probs=47.1
Q ss_pred eeHHHHHHHHHhccCC----CeEecCCeEEEEEeeC--CeEEEEEccCcEEEeeEEEEecCCCchhh
Q 010723 25 ISRMTLQQILAKAVGD----EIILNESNVIDFKDHG--DKVSVVLENGQCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 25 i~R~~L~~~L~~~~~~----~~v~~~~~v~~i~~~~--~~v~v~~~dg~~~~adlvVgADG~~S~vR 85 (502)
..+..+.+.|.+.+.. ..++++++|++++.++ ..++|++++|++++||+||.|+|..|.-+
T Consensus 84 ~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~ 150 (545)
T 3uox_A 84 ASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASR 150 (545)
T ss_dssp CBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC--
T ss_pred CCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCc
Confidence 4677777777665422 2588999999998765 47889999999999999999999877544
No 119
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=90.34 E-value=0.56 Score=43.82 Aligned_cols=61 Identities=16% Similarity=0.086 Sum_probs=47.8
Q ss_pred EeeHHHHHHHHHhccCC---CeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchhh
Q 010723 24 VISRMTLQQILAKAVGD---EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 24 ~i~R~~L~~~L~~~~~~---~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR 85 (502)
.+....+...|.+.+.. ..++ ..+|++++.+++.+.+++.+|+++.+|.||.|.|.++...
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 52 GKAPGEIIAEARRQIERYPTIHWV-EGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp TCCHHHHHHHHHHHHTTCTTEEEE-ESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred CCCHHHHHHHHHHHHHhcCCeEEE-EeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 35566777777776643 3343 4699999998888999999999999999999999976543
No 120
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=90.29 E-value=0.4 Score=52.54 Aligned_cols=63 Identities=19% Similarity=0.345 Sum_probs=50.9
Q ss_pred EEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeE-EEEEccCcEEEeeEEEEecCCCchhh
Q 010723 22 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 22 ~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v-~v~~~dg~~~~adlvVgADG~~S~vR 85 (502)
...++...+.+.|.+.+. .+.++.+++|++|+.+++++ .|.+.+| +++||.||.|+|..|...
T Consensus 145 ~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l 210 (830)
T 1pj5_A 145 DGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKI 210 (830)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHH
T ss_pred CceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHH
Confidence 345678888888888763 36789999999999887776 4677776 799999999999998643
No 121
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=90.09 E-value=0.48 Score=48.73 Aligned_cols=57 Identities=18% Similarity=0.154 Sum_probs=45.3
Q ss_pred HHHHHHHHHhccCCCeEecCCeEEEEEee-CCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 27 RMTLQQILAKAVGDEIILNESNVIDFKDH-GDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 27 R~~L~~~L~~~~~~~~v~~~~~v~~i~~~-~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
-..|.+.|.+.+....|+++++|++|+.+ +++++|++.+|++++||.||.|-+....
T Consensus 201 ~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l 258 (516)
T 1rsg_A 201 YDSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVL 258 (516)
T ss_dssp HHHHHHHHHTTSCGGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHH
T ss_pred HHHHHHHHHHhCCCCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHh
Confidence 34555566666654569999999999986 6679999999999999999999986533
No 122
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=90.01 E-value=0.7 Score=43.94 Aligned_cols=58 Identities=17% Similarity=0.121 Sum_probs=47.8
Q ss_pred eeHHHHHHHHHhccCC--CeEecCCeEEEEEeeCC-eEEEEEccCcEEEeeEEEEecCCCch
Q 010723 25 ISRMTLQQILAKAVGD--EIILNESNVIDFKDHGD-KVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 25 i~R~~L~~~L~~~~~~--~~v~~~~~v~~i~~~~~-~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
+.+..+...|.+.+.. ..++++++|++++.+++ .+.|++.+|+ +.+|.||.|.|.+|.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~ 124 (332)
T 3lzw_A 64 IRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAF 124 (332)
T ss_dssp EEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCC
T ss_pred CCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcC
Confidence 4567888888877653 67888999999998776 7888888886 999999999999764
No 123
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=89.83 E-value=0.58 Score=47.43 Aligned_cols=55 Identities=18% Similarity=0.141 Sum_probs=45.7
Q ss_pred HHHHHHHhccC----------CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 29 TLQQILAKAVG----------DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 29 ~L~~~L~~~~~----------~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
.|.+.|.+.+. ...++++++|++|+.++++++|++.+|++++||.||.|.+....
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 271 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVL 271 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHh
Confidence 56667776653 24689999999999988899999999999999999999997543
No 124
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=89.72 E-value=0.48 Score=47.27 Aligned_cols=51 Identities=20% Similarity=0.318 Sum_probs=41.7
Q ss_pred HHHHHHHhccCCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCC
Q 010723 29 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW 81 (502)
Q Consensus 29 ~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~ 81 (502)
.|.+.|.+..+ .++++++|++|+.++++++|++.+|++++||.||.|-|..
T Consensus 208 ~l~~~~~~~~g--~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 208 DLVDAMSQEIP--EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp HHHHHHHTTCS--CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGG
T ss_pred HHHHHHHhhCC--ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcc
Confidence 34444444444 6899999999999888999999999889999999999964
No 125
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=89.51 E-value=0.6 Score=49.07 Aligned_cols=61 Identities=15% Similarity=0.122 Sum_probs=47.1
Q ss_pred HHHHHHHHhccC--C-CeEecCCeEEEEEeeCCeE---EEE-EccCc--EEEeeEEEEecCCCchhhccc
Q 010723 28 MTLQQILAKAVG--D-EIILNESNVIDFKDHGDKV---SVV-LENGQ--CYAGDLLIGADGIWSKVRKNL 88 (502)
Q Consensus 28 ~~L~~~L~~~~~--~-~~v~~~~~v~~i~~~~~~v---~v~-~~dg~--~~~adlvVgADG~~S~vR~~l 88 (502)
..|.+.|.+.+. . +.++++++|+++..+++.+ .+. +.+|+ +++|+.||.|+|..|.++...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~ 203 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYN 203 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSB
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCc
Confidence 467788887653 2 6789999999999877643 332 25676 789999999999999998655
No 126
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=88.93 E-value=0.43 Score=48.21 Aligned_cols=57 Identities=18% Similarity=0.158 Sum_probs=43.7
Q ss_pred HHHHHHHhccC--CCeEecCCeEEEEEeeCCe-EEEEEccCcEEEeeEEEEecCCCchhh
Q 010723 29 TLQQILAKAVG--DEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 29 ~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~-v~v~~~dg~~~~adlvVgADG~~S~vR 85 (502)
.+.+.|.+.+. .+.++++++|++++.++++ +.+++.+|+++.+|+||.|.|..+.+.
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAND 268 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 34444444442 3679999999999876554 788999999999999999999877653
No 127
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=88.85 E-value=0.73 Score=48.09 Aligned_cols=62 Identities=21% Similarity=0.228 Sum_probs=46.0
Q ss_pred HHHHHHHHHhccC--CCeEecCCeEEEEEeeC-CeEE-EEE--ccCc--EEEeeEEEEecCCCchhhccc
Q 010723 27 RMTLQQILAKAVG--DEIILNESNVIDFKDHG-DKVS-VVL--ENGQ--CYAGDLLIGADGIWSKVRKNL 88 (502)
Q Consensus 27 R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~-~~v~-v~~--~dg~--~~~adlvVgADG~~S~vR~~l 88 (502)
...+.+.|.+.+. .+.++++++|+++..++ +.|. |.+ .+|+ ++.||.||.|+|..|..++.+
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERV 323 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHHH
Confidence 5577778877663 47899999999998766 5432 444 3675 689999999999999876654
No 128
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=88.80 E-value=0.65 Score=44.11 Aligned_cols=58 Identities=19% Similarity=0.205 Sum_probs=43.8
Q ss_pred eeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 25 ISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 25 i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
+.+..+.+.|.+.+. ...+++ .+|++++.+++.++|.. ++.++.+|.||.|+|.++..
T Consensus 69 ~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 69 IVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp BCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECC
T ss_pred cCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCccc
Confidence 456677777776553 245666 68999998888777776 66789999999999987643
No 129
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=88.54 E-value=0.45 Score=48.54 Aligned_cols=56 Identities=29% Similarity=0.334 Sum_probs=44.8
Q ss_pred HHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchhh
Q 010723 30 LQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 30 L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR 85 (502)
+.+.|.+.+. .+.++.+++|++++.+++++.+++.+|+++.+|.||.|.|..+...
T Consensus 234 ~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~ 291 (484)
T 3o0h_A 234 LRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTT 291 (484)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCT
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCC
Confidence 4444444432 3678999999999988888999999999999999999999876553
No 130
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=88.29 E-value=0.88 Score=46.05 Aligned_cols=55 Identities=20% Similarity=0.122 Sum_probs=43.6
Q ss_pred HHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEccCc-EEEeeEEEEecCCCchh
Q 010723 30 LQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQ-CYAGDLLIGADGIWSKV 84 (502)
Q Consensus 30 L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~dg~-~~~adlvVgADG~~S~v 84 (502)
+.+.|.+.+ ..+.++++++|++++.+++++.+++.+|+ ++.+|+||.|.|..+.+
T Consensus 209 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 209 LSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp HHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 344444433 24679999999999987777889999999 89999999999987654
No 131
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=88.10 E-value=0.74 Score=46.84 Aligned_cols=53 Identities=17% Similarity=0.227 Sum_probs=44.8
Q ss_pred HHHHHHHhccCCCeEecCCeEEEEEeeCCeEEEEEccC---cEEEeeEEEEecCCC
Q 010723 29 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENG---QCYAGDLLIGADGIW 81 (502)
Q Consensus 29 ~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v~v~~~dg---~~~~adlvVgADG~~ 81 (502)
.|-+.|.+.++...++++++|++|+.++++|+|++.+| ++++||.||.|-..+
T Consensus 240 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 240 RIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp HHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 56677777776456899999999999999999999887 689999999999775
No 132
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=87.94 E-value=0.72 Score=47.39 Aligned_cols=54 Identities=19% Similarity=0.161 Sum_probs=45.3
Q ss_pred HHHHHHHhccCCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 29 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 29 ~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
.|-+.|.+.++ ..++++++|++|+.++++++|++.+|++++||.||.|-+....
T Consensus 216 ~l~~~l~~~lg-~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l 269 (520)
T 1s3e_A 216 QVSERIMDLLG-DRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLG 269 (520)
T ss_dssp HHHHHHHHHHG-GGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGG
T ss_pred HHHHHHHHHcC-CcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHH
Confidence 55566666554 4589999999999888889999999999999999999998763
No 133
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=87.85 E-value=0.93 Score=45.88 Aligned_cols=57 Identities=18% Similarity=0.250 Sum_probs=44.7
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEc-c--Cc--EEEeeEEEEecCCCchhh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLE-N--GQ--CYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~-d--g~--~~~adlvVgADG~~S~vR 85 (502)
.+.+.|.+.+ ..+.++++++|++++.+++++.+++. + |+ ++.+|+||.|.|..+.+.
T Consensus 211 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 211 ETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTE 274 (464)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCT
T ss_pred HHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCC
Confidence 4445555444 34679999999999988888888887 6 77 899999999999987654
No 134
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=87.81 E-value=0.48 Score=45.18 Aligned_cols=58 Identities=17% Similarity=0.129 Sum_probs=43.9
Q ss_pred eeHHHHHHHHHhccC--CCeEecCCeEEEEEee--CCe-EEEEEccCcEEEeeEEEEecCCCch
Q 010723 25 ISRMTLQQILAKAVG--DEIILNESNVIDFKDH--GDK-VSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 25 i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~--~~~-v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
+.+..+.+.|.+.+. ...++. .+|++++.+ ++. ++|.+.+|+++++|.||.|+|.++.
T Consensus 62 ~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 62 IAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPR 124 (325)
T ss_dssp BCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 567778877776552 355666 589999876 443 6777888999999999999999764
No 135
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=87.40 E-value=0.51 Score=45.32 Aligned_cols=58 Identities=17% Similarity=0.073 Sum_probs=43.7
Q ss_pred eeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEE-EEccCcEEEeeEEEEecCCCchh
Q 010723 25 ISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSV-VLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 25 i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v-~~~dg~~~~adlvVgADG~~S~v 84 (502)
+.+..+.+.|.+.+. ...+++++ +++++. .+.++| .+.+|+++.+|.||.|+|.++..
T Consensus 68 ~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 68 ITGPELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGAAARY 128 (335)
T ss_dssp BCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCCccC
Confidence 566777777766542 35677876 888887 555667 77888899999999999997643
No 136
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=87.17 E-value=0.71 Score=44.84 Aligned_cols=49 Identities=20% Similarity=0.240 Sum_probs=37.5
Q ss_pred EEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 22 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 22 ~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
+..++...|.+.|.+.+. .+.++. ++|++++.+ .+ +||.||.|+|..|.
T Consensus 136 ~~~v~p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~~-----------~~-~a~~VV~A~G~~s~ 186 (363)
T 1c0p_A 136 TLSVHAPKYCQYLARELQKLGATFER-RTVTSLEQA-----------FD-GADLVVNATGLGAK 186 (363)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEE-CCCSBGGGT-----------CS-SCSEEEECCGGGGG
T ss_pred cceecHHHHHHHHHHHHHHCCCEEEE-EEcccHhhc-----------Cc-CCCEEEECCCcchh
Confidence 467899999999998763 356666 788777543 12 89999999999984
No 137
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=86.98 E-value=1 Score=42.67 Aligned_cols=58 Identities=14% Similarity=0.146 Sum_probs=44.4
Q ss_pred eeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 25 ISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 25 i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
+.+..+.+.|.+.+. ...++.++ +++++.+++.+++ +.++.++.+|.||.|+|.++..
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 59 LTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRPFRL-NGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEEE-EESSCEEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEEE-EeCCCEEEcCEEEECCCCCcCC
Confidence 556677777766542 35677775 8899887777877 6788899999999999987643
No 138
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=86.90 E-value=0.88 Score=44.10 Aligned_cols=58 Identities=17% Similarity=0.197 Sum_probs=45.1
Q ss_pred eeHHHHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 25 ISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 25 i~R~~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
+.+..+.+.|.+.+ ....++++++|++++.++++++|+..++ ++.+|.||.|.|.++.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 45566766666543 2356889999999998777788888777 6899999999999864
No 139
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=86.37 E-value=1 Score=45.99 Aligned_cols=56 Identities=18% Similarity=0.207 Sum_probs=44.5
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
.+.+.+.+.+ ..+.++++++|++++.+++.+.|++.+|+++.||+||.|-|....+
T Consensus 227 ~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 227 YLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNV 284 (493)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccH
Confidence 4555555544 2367999999999988777788999999999999999999986543
No 140
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=86.17 E-value=1 Score=45.38 Aligned_cols=58 Identities=17% Similarity=0.173 Sum_probs=44.6
Q ss_pred eeHHHHHHHHHhccCC--CeEecCCeEEEEEee---CCe--EEEEEccCc----EEEeeEEEEecCCCc
Q 010723 25 ISRMTLQQILAKAVGD--EIILNESNVIDFKDH---GDK--VSVVLENGQ----CYAGDLLIGADGIWS 82 (502)
Q Consensus 25 i~R~~L~~~L~~~~~~--~~v~~~~~v~~i~~~---~~~--v~v~~~dg~----~~~adlvVgADG~~S 82 (502)
..|..+.+.|...+.. ..++++++|++++.+ ++. ++|++.+|+ +++||.||.|+|...
T Consensus 124 ~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 124 PCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGTP 192 (463)
T ss_dssp CBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCEE
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCCC
Confidence 4678888888765543 468999999999876 332 477777776 899999999999843
No 141
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=85.94 E-value=7.5 Score=40.32 Aligned_cols=64 Identities=20% Similarity=0.282 Sum_probs=45.8
Q ss_pred eeHHHHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEE-EEEc---cCc--EEEeeEEEEecCCCc-hhhccc
Q 010723 25 ISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLE---NGQ--CYAGDLLIGADGIWS-KVRKNL 88 (502)
Q Consensus 25 i~R~~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~-v~~~---dg~--~~~adlvVgADG~~S-~vR~~l 88 (502)
++-..|...|.+.+ ..+.++.+++|+++..+++.+. |++. +|+ +++||.||-|.|..| .+++..
T Consensus 185 v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~ 257 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLN 257 (571)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTC
T ss_pred EchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhh
Confidence 45556666666654 2367899999999998877643 5553 343 799999999999998 455543
No 142
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=85.84 E-value=1.2 Score=45.28 Aligned_cols=55 Identities=7% Similarity=0.031 Sum_probs=45.1
Q ss_pred HHHHHHHhccCC---CeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 29 TLQQILAKAVGD---EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 29 ~L~~~L~~~~~~---~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
.|.+.|.+.+.. +.++++++|++|+.++++++|++.+|++++||.||.|-|....
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHH
Confidence 556666665532 4589999999999888889999999989999999999998654
No 143
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=85.59 E-value=0.97 Score=46.53 Aligned_cols=59 Identities=15% Similarity=0.149 Sum_probs=46.4
Q ss_pred eeHHHHHHHHHhccC--CCeEecCCeEEEEEee---CCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 25 ISRMTLQQILAKAVG--DEIILNESNVIDFKDH---GDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 25 i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~---~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
..+..+.+.|.+.+. .+.++.+++|++++.+ ++.++|++++|+++++|.||.|+|.++.
T Consensus 264 ~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 264 TEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp BCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 456677777777653 3568899999999754 2367888999999999999999998764
No 144
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=85.27 E-value=1.3 Score=45.14 Aligned_cols=56 Identities=13% Similarity=0.201 Sum_probs=44.4
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.++++++|++++.+++++.+++.+|+++.+|.||-|-|..+.+
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 3444454443 3467999999999998777788888899999999999999987654
No 145
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=85.17 E-value=2.5 Score=40.43 Aligned_cols=65 Identities=11% Similarity=0.048 Sum_probs=45.2
Q ss_pred EeeHHHHHHHHHhcc---CCCeEecCCeEEEEEeeC----C--e---EEEEEc------------cCcEEEe--------
Q 010723 24 VISRMTLQQILAKAV---GDEIILNESNVIDFKDHG----D--K---VSVVLE------------NGQCYAG-------- 71 (502)
Q Consensus 24 ~i~R~~L~~~L~~~~---~~~~v~~~~~v~~i~~~~----~--~---v~v~~~------------dg~~~~a-------- 71 (502)
..+...+...|.+++ +++.++.+++|+++..++ + . |.+... ++.++.|
T Consensus 142 ~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~ 221 (326)
T 2gjc_A 142 VKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGT 221 (326)
T ss_dssp ESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSC
T ss_pred EcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccc
Confidence 335677788888765 346789999999998763 2 2 333211 3357999
Q ss_pred -------eEEEEecCCCchhhccc
Q 010723 72 -------DLLIGADGIWSKVRKNL 88 (502)
Q Consensus 72 -------dlvVgADG~~S~vR~~l 88 (502)
++||.|+|..|++.+.+
T Consensus 222 ~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 222 RDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp CCSSTTCCEEEECCCCC--CCSHH
T ss_pred ccccccCCEEEECcCCCchHHHHH
Confidence 99999999999998877
No 146
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=85.17 E-value=1.4 Score=41.46 Aligned_cols=58 Identities=17% Similarity=0.251 Sum_probs=45.1
Q ss_pred eeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 25 ISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 25 i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
+....+.+.|.+.+. ...+++ ++|++++.+++.+.+++.+|.++.+|.||.|.|....
T Consensus 67 ~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 67 IQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRR 126 (323)
T ss_dssp EEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCc
Confidence 556777777776553 245666 8999999888888999999899999999999999743
No 147
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=85.10 E-value=1.3 Score=44.80 Aligned_cols=56 Identities=23% Similarity=0.411 Sum_probs=44.3
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.++.+++|++++.+++.+++++.+|+++.+|.||-|-|.....
T Consensus 203 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 203 SLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNT 260 (472)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCH
Confidence 3444554443 3467999999999998777888999999999999999999986543
No 148
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=84.97 E-value=1.6 Score=43.12 Aligned_cols=55 Identities=18% Similarity=0.309 Sum_probs=42.7
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeE-EEEEccCcEEEeeEEEEecCCCch
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v-~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
.+.+.|.+.+ ..+.++++++|++++.+++.+ .|+++||+++.||+||-|-|....
T Consensus 185 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 185 EISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccC
Confidence 3444454443 346799999999999877666 488999999999999999998654
No 149
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=83.96 E-value=1.1 Score=42.64 Aligned_cols=59 Identities=17% Similarity=0.157 Sum_probs=46.9
Q ss_pred eeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEc---cCcEEEeeEEEEecCCCchh
Q 010723 25 ISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLE---NGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 25 i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~---dg~~~~adlvVgADG~~S~v 84 (502)
+.+..+...|.+.+. ...+++++ |++++.+.+.+++++. ++.++.+|.||.|.|.++..
T Consensus 81 ~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 81 LTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKR 144 (338)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCC
Confidence 567788887777653 36688887 9999988888888884 67789999999999996543
No 150
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=83.72 E-value=1.9 Score=42.67 Aligned_cols=56 Identities=20% Similarity=0.243 Sum_probs=43.5
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeE-EEEEccCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v-~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.++++++|++++.+++.+ .|++++|+++.||+||-|-|.....
T Consensus 195 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 195 ALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp HHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccCh
Confidence 4444554443 346789999999999876666 6889999999999999999987654
No 151
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=82.61 E-value=1.6 Score=44.86 Aligned_cols=57 Identities=16% Similarity=0.193 Sum_probs=43.9
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCe----EEEEEccCc-EEEeeEEEEecCCCchhh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDK----VSVVLENGQ-CYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~----v~v~~~dg~-~~~adlvVgADG~~S~vR 85 (502)
.+.+.|.+.+ ..+.++++++|++++.++++ +.|++++|+ ++.||.||-|-|..+..-
T Consensus 256 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 256 ETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCH
T ss_pred HHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCc
Confidence 3444555544 24679999999999876555 778888887 899999999999887653
No 152
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=82.05 E-value=1.4 Score=44.77 Aligned_cols=56 Identities=13% Similarity=0.120 Sum_probs=42.4
Q ss_pred HHHHHHHhccC--CCeEecCCeEEEEEeeCCe--EEEEEccC-cEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAVG--DEIILNESNVIDFKDHGDK--VSVVLENG-QCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~--v~v~~~dg-~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+. .+.++++++|++++.++++ +.|++++| +++.+|+||-|-|....+
T Consensus 227 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 227 CIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 34444444432 4679999999999876554 78889999 789999999999987665
No 153
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=81.68 E-value=1.7 Score=47.10 Aligned_cols=42 Identities=21% Similarity=0.176 Sum_probs=37.5
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCC
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW 81 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~ 81 (502)
...|+++++|++|+.++++|+|++.+|++++||.||.|-...
T Consensus 543 gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~ 584 (776)
T 4gut_A 543 GLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLA 584 (776)
T ss_dssp TSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHH
T ss_pred CCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHH
Confidence 346899999999999988999999999999999999998653
No 154
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=81.62 E-value=1.1 Score=44.38 Aligned_cols=55 Identities=15% Similarity=0.165 Sum_probs=42.2
Q ss_pred HHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 30 LQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 30 L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
+.+.|.+.+ ..+.++++++|++++.++....|+++||+++.||+||-|-|..+..
T Consensus 187 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 187 IGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPAD 243 (410)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEECC
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecH
Confidence 344444433 2367899999999987665557889999999999999999987653
No 155
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=81.41 E-value=2.2 Score=43.46 Aligned_cols=56 Identities=20% Similarity=0.210 Sum_probs=43.2
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCC-eEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGD-KVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~-~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.++++++|++++.+++ .+.|++++|+++.+|.||.|-|....+
T Consensus 232 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 232 ELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp HHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 3444555444 3467899999999987664 478889999999999999999987654
No 156
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=81.26 E-value=2.4 Score=43.25 Aligned_cols=56 Identities=20% Similarity=0.256 Sum_probs=42.8
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCC-eEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGD-KVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~-~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.++++++|++++.+++ .+.|++.+|+++.+|+||.|-|....+
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 3444444443 2467999999999987654 478889999999999999999987654
No 157
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=80.61 E-value=1.8 Score=43.98 Aligned_cols=56 Identities=18% Similarity=0.143 Sum_probs=43.8
Q ss_pred HHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEcc----CcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLEN----GQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~d----g~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+. .+.++++++|++++.+++++.+++.+ |+++.+|+||.|-|....+
T Consensus 227 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 227 DLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp HHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred HHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 34445554443 36789999999999887788888887 7789999999999987765
No 158
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=80.48 E-value=1.7 Score=43.98 Aligned_cols=55 Identities=22% Similarity=0.308 Sum_probs=40.6
Q ss_pred HHHHHHhcc---CCCeEecCCeEEEEEeeCCeEEEEEc--cC--cEEEeeEEEEecCCCchh
Q 010723 30 LQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLE--NG--QCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 30 L~~~L~~~~---~~~~v~~~~~v~~i~~~~~~v~v~~~--dg--~~~~adlvVgADG~~S~v 84 (502)
+.+.|.+.+ ..+.++++++|++++.+++++.+++. +| +++.+|.||.|-|..+..
T Consensus 217 ~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 217 VTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp HHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCC
Confidence 444444433 24679999999999987777878876 67 679999999999987754
No 159
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=80.46 E-value=2.3 Score=42.76 Aligned_cols=56 Identities=14% Similarity=0.209 Sum_probs=42.1
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEc---cCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLE---NGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~---dg~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.++++++|++++.+++++.+++. +++++.+|+||.|.|....+
T Consensus 212 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 212 QMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNT 272 (455)
T ss_dssp HHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCccc
Confidence 3444444433 24678999999999988777888776 45689999999999987654
No 160
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=79.70 E-value=3.9 Score=41.66 Aligned_cols=56 Identities=20% Similarity=0.274 Sum_probs=43.1
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCC-eEEEEEccCcE-EEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGD-KVSVVLENGQC-YAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~-~v~v~~~dg~~-~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.++++++|++++.+++ .+.+++++|++ +.+|+||-|-|....+
T Consensus 218 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 218 SVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred hhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 3444454444 3467999999999987654 47888999988 9999999999987765
No 161
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=79.28 E-value=3.5 Score=39.55 Aligned_cols=50 Identities=14% Similarity=0.355 Sum_probs=36.7
Q ss_pred EEEeeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 22 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 22 ~~~i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
+..++...+.+.|.+.+. .+.++. ++|++++..+ .++||.||.|+|.+|.
T Consensus 136 ~~~v~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-----------~~~a~~VV~A~G~~s~ 187 (351)
T 3g3e_A 136 SLILEGKNYLQWLTERLTERGVKFFQ-RKVESFEEVA-----------REGADVIVNCTGVWAG 187 (351)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-----------HTTCSEEEECCGGGGG
T ss_pred ceEEcHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-----------cCCCCEEEECCCcChH
Confidence 567888899999988763 355666 7776664321 2679999999999984
No 162
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=79.26 E-value=2.8 Score=42.50 Aligned_cols=52 Identities=21% Similarity=0.279 Sum_probs=43.0
Q ss_pred HHHHHHHhccCCCeEecCCeEEEEEeeCCeEEEEEccCc----EEEeeEEEEecCCC
Q 010723 29 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQ----CYAGDLLIGADGIW 81 (502)
Q Consensus 29 ~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v~v~~~dg~----~~~adlvVgADG~~ 81 (502)
.|-+.|.+.+.. .++++++|++|+.++++|+|++.+|+ +++||.||.|=+..
T Consensus 242 ~l~~~l~~~l~~-~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 242 KLPTAMYRDIQD-KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp HHHHHHHHHTGG-GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccc-ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChH
Confidence 566677776654 68999999999998888999988775 58999999998875
No 163
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=79.14 E-value=2 Score=42.94 Aligned_cols=55 Identities=22% Similarity=0.293 Sum_probs=41.1
Q ss_pred HHHHHHhccC--CCeEecCCeEEEEEe--eCCeE-EEEEccCcEEEeeEEEEecCCCchh
Q 010723 30 LQQILAKAVG--DEIILNESNVIDFKD--HGDKV-SVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 30 L~~~L~~~~~--~~~v~~~~~v~~i~~--~~~~v-~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
+.+.|.+.+. .+.++++++|++++. +++.+ .|++++|+++.+|+||.|-|..+.+
T Consensus 193 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~ 252 (431)
T 1q1r_A 193 VSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNC 252 (431)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCc
Confidence 3344444332 367899999999987 44555 6888999999999999999986543
No 164
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=78.94 E-value=1.6 Score=44.22 Aligned_cols=61 Identities=23% Similarity=0.207 Sum_probs=43.8
Q ss_pred HHHHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEE-EEEc-cCcEEEeeEEEEecCCCchhhccc
Q 010723 27 RMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLE-NGQCYAGDLLIGADGIWSKVRKNL 88 (502)
Q Consensus 27 R~~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~-v~~~-dg~~~~adlvVgADG~~S~vR~~l 88 (502)
...+.+.|.+.+ .++.++.+++| ++..+++.+. +... ++.++.||.||.|+|..|.++...
T Consensus 118 g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~~ 182 (472)
T 2e5v_A 118 GREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEYS 182 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSSB
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCccc
Confidence 346677777665 24678999999 9987777553 3332 223578999999999999987643
No 165
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=78.47 E-value=2.8 Score=41.89 Aligned_cols=56 Identities=13% Similarity=-0.018 Sum_probs=43.5
Q ss_pred HHHHHHHhccCCCeEecCCeEEEEEeeCCe-EEEEEccCcEEEeeEEEEecCCCchhhcc
Q 010723 29 TLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLIGADGIWSKVRKN 87 (502)
Q Consensus 29 ~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~-v~v~~~dg~~~~adlvVgADG~~S~vR~~ 87 (502)
.|-+.|.+.++ ..++++++|++|+.++++ ++|++ +|++++||.||-|=+.. .+.+.
T Consensus 216 ~l~~~l~~~lg-~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~-~~~~l 272 (453)
T 2yg5_A 216 QVSIRMAEALG-DDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPN-LYSRI 272 (453)
T ss_dssp HHHHHHHHHHG-GGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGG-GGGGS
T ss_pred HHHHHHHHhcC-CcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHH-HHhcC
Confidence 45556666554 468999999999988888 88775 77889999999999886 34443
No 166
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=77.83 E-value=1.9 Score=43.55 Aligned_cols=54 Identities=11% Similarity=0.086 Sum_probs=42.4
Q ss_pred HHHHHHHhccCCCeEecCCeEEEEEeeCCeEEEEE---ccCcEEEeeEEEEecCCCch
Q 010723 29 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVL---ENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 29 ~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v~v~~---~dg~~~~adlvVgADG~~S~ 83 (502)
.|.+.|.+.++ ..++++++|++|+.+++++.|++ .+|++++||.||.|-+....
T Consensus 239 ~l~~~l~~~lg-~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~ 295 (478)
T 2ivd_A 239 VLIDALAASLG-DAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHAT 295 (478)
T ss_dssp HHHHHHHHHHG-GGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHhh-hhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHH
Confidence 46666666664 46899999999998888888888 78888999999999988654
No 167
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=77.64 E-value=2.2 Score=43.20 Aligned_cols=53 Identities=15% Similarity=0.203 Sum_probs=40.9
Q ss_pred HHHHHHHhccC--CCeEecCCeEEEEEe-eCCe-EEEEEccCcEEEeeEEEEecCCC
Q 010723 29 TLQQILAKAVG--DEIILNESNVIDFKD-HGDK-VSVVLENGQCYAGDLLIGADGIW 81 (502)
Q Consensus 29 ~L~~~L~~~~~--~~~v~~~~~v~~i~~-~~~~-v~v~~~dg~~~~adlvVgADG~~ 81 (502)
.|-+.|.+.+. .++++.+++|++|.. +++. +.|++.+|++++||.||.|.|..
T Consensus 257 ~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 257 GIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 66667766553 367999999999987 4454 45888899999999999999876
No 168
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=77.46 E-value=6.4 Score=41.31 Aligned_cols=57 Identities=18% Similarity=0.188 Sum_probs=43.5
Q ss_pred HHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEE-EEE---ccCc--EEEeeEEEEecCCCchh
Q 010723 28 MTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVL---ENGQ--CYAGDLLIGADGIWSKV 84 (502)
Q Consensus 28 ~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~-v~~---~dg~--~~~adlvVgADG~~S~v 84 (502)
..|.+.|.+++. .+.++.++.|+++..+++.+. |.. .+|+ .+.|+.||.|.|..|.+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 367778877764 367999999999987766543 333 4675 68999999999999975
No 169
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=77.07 E-value=4.9 Score=41.04 Aligned_cols=58 Identities=16% Similarity=0.140 Sum_probs=41.8
Q ss_pred HHHHHHHhccC--CCeEecCCeEEEEEee-CCeEE-EEEc-cCc--EEEee-EEEEecCCCchhhc
Q 010723 29 TLQQILAKAVG--DEIILNESNVIDFKDH-GDKVS-VVLE-NGQ--CYAGD-LLIGADGIWSKVRK 86 (502)
Q Consensus 29 ~L~~~L~~~~~--~~~v~~~~~v~~i~~~-~~~v~-v~~~-dg~--~~~ad-lvVgADG~~S~vR~ 86 (502)
.|.+.|.+.+. .++++++++|+++..+ ++.|+ |.+. +++ +++|+ .||.|.|..|.-++
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~n~~ 268 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAYNDK 268 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTTCHH
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhhCHH
Confidence 67777777652 4789999999999987 45443 4443 333 58995 99999999985443
No 170
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=76.57 E-value=3.8 Score=41.04 Aligned_cols=55 Identities=13% Similarity=0.108 Sum_probs=42.1
Q ss_pred HHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+. .+.++.+++|++++.+++++.|++++| ++.||.||-|-|.....
T Consensus 190 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~~ 246 (452)
T 3oc4_A 190 EMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQL 246 (452)
T ss_dssp HHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCCC
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCCh
Confidence 44455555442 367899999999997777788888777 89999999999986543
No 171
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=75.02 E-value=3.8 Score=43.49 Aligned_cols=49 Identities=16% Similarity=0.102 Sum_probs=38.9
Q ss_pred HHHHHHHhccCCCeEecCCeEEEEEeeCCeEEEEEcc------CcEEEeeEEEEecCC
Q 010723 29 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN------GQCYAGDLLIGADGI 80 (502)
Q Consensus 29 ~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v~v~~~d------g~~~~adlvVgADG~ 80 (502)
.|-+.|.+. ..|+++++|++|+.++++|+|++.+ |++++||.||.|=..
T Consensus 402 ~l~~~La~~---l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~ 456 (662)
T 2z3y_A 402 CVPVALAEG---LDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPL 456 (662)
T ss_dssp HHHHHHTTT---CEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCH
T ss_pred HHHHHHHhc---CceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCH
Confidence 344444443 3689999999999999999999877 568999999988764
No 172
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=74.68 E-value=2.3 Score=43.97 Aligned_cols=57 Identities=18% Similarity=0.135 Sum_probs=38.9
Q ss_pred HHHHHHHhcc---CCCeEecCCeEEEEEe-eCC------eEE-EEEc---cCc--EEEeeEEEEecCCCchhh
Q 010723 29 TLQQILAKAV---GDEIILNESNVIDFKD-HGD------KVS-VVLE---NGQ--CYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 29 ~L~~~L~~~~---~~~~v~~~~~v~~i~~-~~~------~v~-v~~~---dg~--~~~adlvVgADG~~S~vR 85 (502)
.+.+.|.+.+ .++.++++++|+++.. +++ .+. |.+. +|+ ++.|+.||.|+|..|.+-
T Consensus 139 ~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 211 (540)
T 1chu_A 139 EVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVY 211 (540)
T ss_dssp ---CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGS
T ss_pred HHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccccc
Confidence 4444555544 3467999999999987 434 433 4433 565 789999999999999874
No 173
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=74.53 E-value=4.1 Score=41.16 Aligned_cols=57 Identities=18% Similarity=0.173 Sum_probs=42.3
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEe--eCCeEEEEEc-----cCcEEEeeEEEEecCCCchhh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKD--HGDKVSVVLE-----NGQCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~--~~~~v~v~~~-----dg~~~~adlvVgADG~~S~vR 85 (502)
.+.+.|.+.+ ..+.++++++|++++. +++.+.+++. +++++.+|.||.|-|....+.
T Consensus 225 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 225 EVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 3444554443 3467999999999987 5666777776 456899999999999877654
No 174
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=74.48 E-value=3.5 Score=41.54 Aligned_cols=56 Identities=14% Similarity=0.273 Sum_probs=41.6
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEc---cC--cEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLE---NG--QCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~---dg--~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.++++++|++++.+++++.++++ +| +++.+|+||.|-|..+.+
T Consensus 219 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 219 EIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp HHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECC
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCC
Confidence 3444444443 24678999999999877766777776 55 689999999999987654
No 175
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=74.32 E-value=3.4 Score=41.54 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=33.0
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEccC--cEEEeeEEEEecCCCchhh
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLENG--QCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~dg--~~~~adlvVgADG~~S~vR 85 (502)
++.++.++.+. .+.+.+++.+.+| +++++|.||.|+|++|.+.
T Consensus 105 gv~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~ 149 (464)
T 2a8x_A 105 KITEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAIIATGSSTRLV 149 (464)
T ss_dssp TCEEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEEECCCEEECCC
T ss_pred CCEEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 45677776543 3567788888888 6899999999999987544
No 176
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=74.16 E-value=3.5 Score=41.47 Aligned_cols=55 Identities=24% Similarity=0.351 Sum_probs=41.1
Q ss_pred HHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEc-cC--cEEEeeEEEEecCCCchh
Q 010723 30 LQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLE-NG--QCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 30 L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~-dg--~~~~adlvVgADG~~S~v 84 (502)
+.+.|.+.+. .+.++++++|++++.+++++.+++. +| +++.+|+||-|-|....+
T Consensus 214 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 214 VSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp HHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccC
Confidence 4444444432 3679999999999887777888876 67 679999999999986543
No 177
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=73.56 E-value=2.1 Score=42.75 Aligned_cols=55 Identities=20% Similarity=0.102 Sum_probs=43.2
Q ss_pred HHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 29 TLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 29 ~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
.|-+.|.+.+. .++++++++|++|..++++++....+|++++||.||.|-|..+.
T Consensus 235 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 235 ELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 56666665542 35688999999999888887754568889999999999998864
No 178
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=73.36 E-value=5.7 Score=41.03 Aligned_cols=56 Identities=20% Similarity=0.224 Sum_probs=43.1
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEe-------------------eCCeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKD-------------------HGDKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~-------------------~~~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.+++++++++++. .++++++++.+|+++.+|.||-|-|....+
T Consensus 193 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 193 EMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPET 269 (565)
T ss_dssp HHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccch
Confidence 3444444433 3467899999999987 366788889999999999999999987653
No 179
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=73.15 E-value=6.7 Score=39.77 Aligned_cols=56 Identities=18% Similarity=0.220 Sum_probs=42.6
Q ss_pred HHHHHHHhccC-CCeEecCCeEEEEEeeCCeEEEEEc--cC--cEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAVG-DEIILNESNVIDFKDHGDKVSVVLE--NG--QCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~~-~~~v~~~~~v~~i~~~~~~v~v~~~--dg--~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+. .+.++++++|++++.+++++++++. +| +++.+|.||-|-|....+
T Consensus 216 ~~~~~l~~~l~~~V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 216 EMKRYAEKTFNEEFYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANV 276 (492)
T ss_dssp HHHHHHHHHHHTTSEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESC
T ss_pred HHHHHHHHHHhhCcEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCC
Confidence 34444444432 2678999999999988888888886 67 689999999999986543
No 180
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=72.78 E-value=4.9 Score=40.50 Aligned_cols=56 Identities=11% Similarity=0.124 Sum_probs=41.4
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCe-EEEEE-----ccCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDK-VSVVL-----ENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~-v~v~~-----~dg~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.++++++|++++.++++ +.+++ .+++++.+|+||.|-|..+.+
T Consensus 221 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 221 EISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCC
Confidence 3444444443 24679999999999987766 77775 356789999999999987654
No 181
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=72.19 E-value=7 Score=39.59 Aligned_cols=56 Identities=16% Similarity=0.184 Sum_probs=42.3
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEcc---C--cEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLEN---G--QCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~d---g--~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.++.+++|++++.+++++.+++.+ | +++.+|.||-|-|....+
T Consensus 240 ~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 240 EVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECC
T ss_pred HHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCC
Confidence 3444444443 246789999999999988888888874 5 579999999999986544
No 182
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=71.69 E-value=9.8 Score=39.60 Aligned_cols=57 Identities=18% Similarity=0.234 Sum_probs=41.6
Q ss_pred HHHHHHHHhcc--CCCeEecCCeEEEEEee-CCeEE-EEE---ccCc--EEEeeEEEEecCCCchh
Q 010723 28 MTLQQILAKAV--GDEIILNESNVIDFKDH-GDKVS-VVL---ENGQ--CYAGDLLIGADGIWSKV 84 (502)
Q Consensus 28 ~~L~~~L~~~~--~~~~v~~~~~v~~i~~~-~~~v~-v~~---~dg~--~~~adlvVgADG~~S~v 84 (502)
..+.+.|.+.+ .++.++++++|+++..+ ++.+. |.. .+|+ ++.|+.||.|.|..|.+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 45666776655 34789999999999875 44332 333 4565 68999999999999875
No 183
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=71.26 E-value=5.1 Score=40.29 Aligned_cols=56 Identities=18% Similarity=0.172 Sum_probs=44.6
Q ss_pred HHHHHHHhccCCCeEecCCeEEEEEeeC-CeEEEEEc--cCc--EEEeeEEEEecCCCchhh
Q 010723 29 TLQQILAKAVGDEIILNESNVIDFKDHG-DKVSVVLE--NGQ--CYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 29 ~L~~~L~~~~~~~~v~~~~~v~~i~~~~-~~v~v~~~--dg~--~~~adlvVgADG~~S~vR 85 (502)
.+.+.|.+.+. +.++.+++|++++.++ +++.++++ +|+ ++.+|.||-|-|.....-
T Consensus 215 ~~~~~l~~~l~-v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~ 275 (466)
T 3l8k_A 215 DIVNTLLSILK-LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP 275 (466)
T ss_dssp HHHHHHHHHHC-CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCC
T ss_pred HHHHHHHhcCE-EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccc
Confidence 55566666555 6789999999999877 88889888 676 899999999999865543
No 184
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=71.07 E-value=5.7 Score=39.18 Aligned_cols=53 Identities=9% Similarity=0.064 Sum_probs=40.9
Q ss_pred HHHHHHHhccCCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 29 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 29 ~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
.+-+.|.+.+.. .++++++|++|+.++++++|++.+|+ ++||.||-|=+..-.
T Consensus 207 ~l~~~l~~~l~~-~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~~~ 259 (424)
T 2b9w_A 207 AMFEHLNATLEH-PAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLEKF 259 (424)
T ss_dssp HHHHHHHHHSSS-CCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHHHH
T ss_pred HHHHHHHHhhcc-eEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHHHH
Confidence 444555555543 47899999999988888999888885 899999999887643
No 185
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=70.83 E-value=5 Score=43.83 Aligned_cols=49 Identities=16% Similarity=0.133 Sum_probs=38.6
Q ss_pred HHHHHHHhccCCCeEecCCeEEEEEeeCCeEEEEEcc------CcEEEeeEEEEecCC
Q 010723 29 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN------GQCYAGDLLIGADGI 80 (502)
Q Consensus 29 ~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v~v~~~d------g~~~~adlvVgADG~ 80 (502)
.|-+.|.+.+ .|+++++|+.|+.++++|+|++.+ |++++||.||.|=-.
T Consensus 573 ~L~~aLa~~l---~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl 627 (852)
T 2xag_A 573 CVPVALAEGL---DIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPL 627 (852)
T ss_dssp HHHHHHTTTC---CEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCH
T ss_pred HHHHHHHhCC---CEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCH
Confidence 3445555433 589999999999999999999876 568999999988644
No 186
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=70.63 E-value=8 Score=38.62 Aligned_cols=56 Identities=21% Similarity=0.251 Sum_probs=40.6
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.++++++|++++.+++.+.....+|+++.+|.||-|-|....+
T Consensus 192 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 192 EFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPNT 249 (452)
T ss_dssp HHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECC
T ss_pred hHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCCH
Confidence 3444444443 2467999999999987666665334488899999999999987654
No 187
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=70.28 E-value=12 Score=37.36 Aligned_cols=43 Identities=16% Similarity=0.123 Sum_probs=36.7
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEc---cCc--EEEeeEEEEecCCCc
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLE---NGQ--CYAGDLLIGADGIWS 82 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~---dg~--~~~adlvVgADG~~S 82 (502)
.+.++.+++|++++.+++++.+++. +|+ ++.+|+||-|-|...
T Consensus 330 ~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p 377 (463)
T 3s5w_A 330 RHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYER 377 (463)
T ss_dssp CSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEEC
T ss_pred CeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCC
Confidence 4679999999999998888888887 675 489999999999753
No 188
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=69.66 E-value=6.1 Score=39.69 Aligned_cols=55 Identities=18% Similarity=0.195 Sum_probs=41.5
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCe-EEEE-EccCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDK-VSVV-LENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~-v~v~-~~dg~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.++.+++|++++.++++ +.|+ +++|+ +.+|.||-|-|..+..
T Consensus 212 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 212 DMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNT 270 (463)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCC
Confidence 3444444443 24679999999999987655 6788 88888 9999999999986543
No 189
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=68.98 E-value=7.3 Score=39.19 Aligned_cols=55 Identities=22% Similarity=0.121 Sum_probs=42.2
Q ss_pred HHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEccC---cEEEeeEEEEecCCCchh
Q 010723 30 LQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENG---QCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 30 L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~dg---~~~~adlvVgADG~~S~v 84 (502)
+.+.|.+.+ ..+.++.+++|++++.+++++.+++.++ +++.+|.||-|-|.....
T Consensus 223 ~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 223 VAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp HHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccC
Confidence 444444433 2467899999999998888888888865 679999999999986554
No 190
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=67.64 E-value=9.9 Score=38.11 Aligned_cols=56 Identities=13% Similarity=0.126 Sum_probs=42.5
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchhh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR 85 (502)
.+.+.|.+.+ ..+.++.+++|++++.+++.+.++++ +.++.+|.||-|-|..+.+.
T Consensus 217 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 217 AIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNTR 274 (467)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESCT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCCC
Confidence 3445555544 34679999999999987777777776 56899999999999987653
No 191
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=66.74 E-value=8.2 Score=38.01 Aligned_cols=51 Identities=20% Similarity=0.235 Sum_probs=38.3
Q ss_pred HHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 30 LQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 30 L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
+.+.|.+.+ ..+.++.+++|++++ ++ .|++++|+++.+|+||-|-|....+
T Consensus 189 ~~~~l~~~l~~~GV~i~~~~~v~~i~--~~--~v~~~~g~~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 189 LADFVARYHAAQGVDLRFERSVTGSV--DG--VVLLDDGTRIAADMVVVGIGVLAND 241 (408)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEE--TT--EEEETTSCEEECSEEEECSCEEECC
T ss_pred HHHHHHHHHHHcCcEEEeCCEEEEEE--CC--EEEECCCCEEEcCEEEECcCCCccH
Confidence 344444433 246789999999998 33 6778899999999999999987543
No 192
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=66.69 E-value=7.5 Score=36.40 Aligned_cols=55 Identities=20% Similarity=0.163 Sum_probs=38.8
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEE-EEEcc----C--cEEEeeEEEEecCCCch
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLEN----G--QCYAGDLLIGADGIWSK 83 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~-v~~~d----g--~~~~adlvVgADG~~S~ 83 (502)
.+.+.|.+.+ ..+.+++++++++++.+++.+. |++.+ | +++.+|.||-|-|....
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~ 248 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPN 248 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEES
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCC
Confidence 4455555543 2467899999999987765543 66654 4 57999999999997644
No 193
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=66.57 E-value=4.3 Score=40.41 Aligned_cols=43 Identities=21% Similarity=0.291 Sum_probs=35.1
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
.+.++.+++|+.++.++. +|++++|+++.+|.||.|+|.++.+
T Consensus 74 gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~p~~ 116 (431)
T 1q1r_A 74 NIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLATGGRPRP 116 (431)
T ss_dssp TEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEECC
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcCCCCccC
Confidence 356888999999987655 5667888899999999999997644
No 194
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=64.04 E-value=5.1 Score=40.31 Aligned_cols=43 Identities=19% Similarity=0.096 Sum_probs=32.7
Q ss_pred CeEecCCeEEEEEeeCCeEEEEEccC--cEEEeeEEEEecCCCchhhc
Q 010723 41 EIILNESNVIDFKDHGDKVSVVLENG--QCYAGDLLIGADGIWSKVRK 86 (502)
Q Consensus 41 ~~v~~~~~v~~i~~~~~~v~v~~~dg--~~~~adlvVgADG~~S~vR~ 86 (502)
+.++.++.+. + +.+.++|++.+| +++++|.||.|+|.++.+-.
T Consensus 111 v~~~~g~~~~-~--~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~ 155 (470)
T 1dxl_A 111 VTYVKGYGKF-V--SPSEISVDTIEGENTVVKGKHIIIATGSDVKSLP 155 (470)
T ss_dssp CEEEESCEEE-E--ETTEEEECCSSSCCEEEECSEEEECCCEEECCBT
T ss_pred CEEEEeEEEE-e--cCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCC
Confidence 5677777553 3 556788887788 68999999999999876543
No 195
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=62.47 E-value=10 Score=36.28 Aligned_cols=43 Identities=16% Similarity=0.082 Sum_probs=35.0
Q ss_pred CeEecCCeEEEEEeeCCeEEEEEccCcEEE-eeEEEEecCCCch
Q 010723 41 EIILNESNVIDFKDHGDKVSVVLENGQCYA-GDLLIGADGIWSK 83 (502)
Q Consensus 41 ~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~-adlvVgADG~~S~ 83 (502)
+.++.+++|++++.+++.+.+++.+|+++. +|.||-|-|....
T Consensus 230 v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 230 IEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDAT 273 (369)
T ss_dssp EEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGG
T ss_pred EEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCCc
Confidence 678899999999877778888899998765 5888888887543
No 196
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=61.18 E-value=6.8 Score=39.09 Aligned_cols=54 Identities=20% Similarity=0.390 Sum_probs=39.0
Q ss_pred HHHHHHHhccC--CCeEecCCeEEEEEeeCCeE-EEEEccCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAVG--DEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v-~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+. .+.++++++|++++.+ +.+ .+.+ +++++.+|.||.|.|.++.+
T Consensus 192 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~p~~ 248 (447)
T 1nhp_A 192 EFTDVLTEEMEANNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVRPNT 248 (447)
T ss_dssp HHHHHHHHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEEESC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCCCCh
Confidence 45555555542 3678999999999876 433 3555 56789999999999987653
No 197
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=61.11 E-value=14 Score=38.96 Aligned_cols=56 Identities=18% Similarity=0.188 Sum_probs=41.5
Q ss_pred HHHHHHHhccC--CCeEecCCeEEEEEeeCCeE---EEEE-ccCc--EEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAVG--DEIILNESNVIDFKDHGDKV---SVVL-ENGQ--CYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v---~v~~-~dg~--~~~adlvVgADG~~S~v 84 (502)
.|...|.+.+. .+.++.++.|+++..+++.+ .+.. .+|+ .+.|+.||.|.|..|.+
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 56667776653 46799999999998776643 3322 4675 58999999999999875
No 198
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=60.92 E-value=6.4 Score=39.43 Aligned_cols=54 Identities=13% Similarity=0.105 Sum_probs=41.3
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEee--CCeEE-EEEccCcEEEeeEEEEecCCCch
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDH--GDKVS-VVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~--~~~v~-v~~~dg~~~~adlvVgADG~~S~ 83 (502)
.|-+.|.+.+ ..++++++++|++|..+ ++++. |+. +|++++||.||.|-|..+.
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 5666666654 23679999999999987 66654 444 6889999999999998864
No 199
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=59.01 E-value=8.8 Score=38.42 Aligned_cols=54 Identities=19% Similarity=0.120 Sum_probs=41.0
Q ss_pred HHHHHHHhccC--CCeEecCCeEEEEEeeCCe-EEEEEccCcEEEeeEEEEecCCCch
Q 010723 29 TLQQILAKAVG--DEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 29 ~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~-v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
.|-+.|.+.+. .+.++++++|++|+.++++ +.|++ ++.+++||.||-|=+....
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~~~ 291 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPASVL 291 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHHHH
Confidence 46666666653 3679999999999987766 77765 5568999999999876543
No 200
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=58.42 E-value=12 Score=37.88 Aligned_cols=52 Identities=12% Similarity=0.116 Sum_probs=40.8
Q ss_pred HHHHHHHHhccCC--CeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCC
Q 010723 28 MTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW 81 (502)
Q Consensus 28 ~~L~~~L~~~~~~--~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~ 81 (502)
..|-+.|.+.+.. +.++++++|++|..++.. +++.||+++.||.||-+=-..
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~ 275 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVD 275 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHH
Confidence 4577777777754 578999999999887764 567899999999999775443
No 201
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=58.06 E-value=12 Score=37.78 Aligned_cols=57 Identities=16% Similarity=0.186 Sum_probs=43.6
Q ss_pred HHHHHHHHHhccCCCeEecC--CeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchhh
Q 010723 27 RMTLQQILAKAVGDEIILNE--SNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 27 R~~L~~~L~~~~~~~~v~~~--~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR 85 (502)
-..|-+.|.+.+....++++ ++|++|+.++++| ++.+|+++.||.||-|=......+
T Consensus 215 ~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v--~~~~G~~~~ad~VI~a~p~~~~~~ 273 (484)
T 4dsg_A 215 TGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTI--TFSNGEVVSYDYLISTVPFDNLLR 273 (484)
T ss_dssp THHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEE--EETTSCEEECSEEEECSCHHHHHH
T ss_pred HHHHHHHHHhhhhhCeEEECCCceeEEEEecCCEE--EECCCCEEECCEEEECCCHHHHHH
Confidence 34677788887765468888 4699999887765 458899999999999887665443
No 202
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=56.73 E-value=19 Score=36.16 Aligned_cols=54 Identities=17% Similarity=0.153 Sum_probs=39.3
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCC-eEEEEEccCc-----EEEeeEEEEecCCCc
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGD-KVSVVLENGQ-----CYAGDLLIGADGIWS 82 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~-~v~v~~~dg~-----~~~adlvVgADG~~S 82 (502)
.+.+.|.+.+ ..+.++.+++|++++.+++ .+.+++.+++ ++.+|.||-|-|...
T Consensus 228 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 228 QMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp HHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccccc
Confidence 3444444443 2467899999999987654 4778887764 789999999999754
No 203
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=56.70 E-value=11 Score=37.96 Aligned_cols=43 Identities=16% Similarity=0.033 Sum_probs=31.2
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEccC------------cEEEeeEEEEecCCCchhh
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLENG------------QCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~dg------------~~~~adlvVgADG~~S~vR 85 (502)
.+.++.++.+. .+++.+.+++.+| .++++|.||.|+|.++.+-
T Consensus 109 gv~~~~g~~~~---~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~~ 163 (482)
T 1ojt_A 109 KVDVIQGDGQF---LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKL 163 (482)
T ss_dssp TCEEEEEEEEE---EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECCC
T ss_pred CcEEEeeEEEE---ccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCCC
Confidence 35667766543 3556788877666 6799999999999987543
No 204
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=55.16 E-value=6.8 Score=39.31 Aligned_cols=54 Identities=15% Similarity=0.116 Sum_probs=38.8
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEccC--cEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENG--QCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~dg--~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.++++++|++++. + .++++..+| +++.+|.||.|-|....+
T Consensus 213 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~-~v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 213 ELTAPVAESLKKLGIALHLGHSVEGYEN-G-CLLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp HHHHHHHHHHHHHTCEEETTCEEEEEET-T-EEEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEECCEEEEEEe-C-CEEEEECCCceEEEECCEEEECcCCCcCC
Confidence 3444444443 2467999999999986 3 366664457 689999999999987654
No 205
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=55.09 E-value=11 Score=37.91 Aligned_cols=44 Identities=14% Similarity=0.031 Sum_probs=35.3
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEE-ccCc--EEEeeEEEEecCCCch
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVL-ENGQ--CYAGDLLIGADGIWSK 83 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~-~dg~--~~~adlvVgADG~~S~ 83 (502)
.+.++.+++|+.++.+++.+++.. .+|+ ++++|.||.|.|....
T Consensus 107 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~ 153 (480)
T 3cgb_A 107 GIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPV 153 (480)
T ss_dssp CCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred CCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCccc
Confidence 356888999999988777777765 4576 7999999999997543
No 206
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=54.49 E-value=7.5 Score=37.99 Aligned_cols=40 Identities=8% Similarity=-0.009 Sum_probs=34.6
Q ss_pred CeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCC
Q 010723 41 EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGI 80 (502)
Q Consensus 41 ~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~ 80 (502)
++++.++++..++.+.+...+.+++|+++.+|+||.|=|.
T Consensus 217 i~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 217 IEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp EEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCE
T ss_pred cEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCc
Confidence 5688999999998888888899999999999999987654
No 207
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=54.46 E-value=9.5 Score=37.42 Aligned_cols=49 Identities=14% Similarity=0.224 Sum_probs=36.3
Q ss_pred HHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCC
Q 010723 29 TLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW 81 (502)
Q Consensus 29 ~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~ 81 (502)
.+.+.+.+.+. ++.++++++|++++.+ + |++++|+++.+|+||-|-|..
T Consensus 219 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 219 NSRKAVASIYNQLGIKLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEECSS--E--EEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHCCCEEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCCC
Confidence 44555554442 4678999999998643 3 678899999999999998854
No 208
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=54.38 E-value=25 Score=36.12 Aligned_cols=47 Identities=15% Similarity=0.056 Sum_probs=41.5
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchhhc
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVRK 86 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR~ 86 (502)
.+.++.++.+..++..++.+.+.+.+++++.+|.|+.|=|+.-.+-.
T Consensus 277 gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~ 323 (542)
T 4b1b_A 277 GVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDG 323 (542)
T ss_dssp TCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCGG
T ss_pred cceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCccc
Confidence 36789999999999999999999999999999999999998766543
No 209
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=54.33 E-value=18 Score=36.69 Aligned_cols=57 Identities=12% Similarity=0.122 Sum_probs=44.1
Q ss_pred EeeHHHHHHHHHhccCC--CeEecCCeEEEEEeeC--------CeEEEEEccC-----cEEEeeEEEEecCC
Q 010723 24 VISRMTLQQILAKAVGD--EIILNESNVIDFKDHG--------DKVSVVLENG-----QCYAGDLLIGADGI 80 (502)
Q Consensus 24 ~i~R~~L~~~L~~~~~~--~~v~~~~~v~~i~~~~--------~~v~v~~~dg-----~~~~adlvVgADG~ 80 (502)
...|.++.+.|...+.. ..++++++|++++..+ +.++|+..++ +++.|+.||-|-|.
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 46788999999876643 3589999999998654 2477887664 36899999999994
No 210
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=53.60 E-value=19 Score=33.73 Aligned_cols=55 Identities=16% Similarity=0.062 Sum_probs=38.2
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEc---cC--cEEEeeEEEEecCCCch
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLE---NG--QCYAGDLLIGADGIWSK 83 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~---dg--~~~~adlvVgADG~~S~ 83 (502)
.+.+.|.+.+ ..+.+++++++++++.++....|++. +| +++.+|+||-|-|..+.
T Consensus 192 ~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 253 (335)
T 2zbw_A 192 ASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITK 253 (335)
T ss_dssp HHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEE
T ss_pred HHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCC
Confidence 3444454443 24679999999999875443346665 67 57899999999997653
No 211
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=53.43 E-value=16 Score=37.95 Aligned_cols=54 Identities=22% Similarity=0.310 Sum_probs=40.3
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.++.+++|++++.++++ |++.+|+++.+|.||-|-|..+..
T Consensus 229 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 229 EMAAYVHEHMKNHDVELVFEDGVDALEENGAV--VRLKSGSVIQTDMLILAIGVQPES 284 (588)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEGGGTE--EEETTSCEEECSEEEECSCEEECC
T ss_pred HHHHHHHHHHHHcCCEEEECCeEEEEecCCCE--EEECCCCEEEcCEEEEccCCCCCh
Confidence 3444444443 34678999999999876554 667899999999999999986543
No 212
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=52.84 E-value=14 Score=37.13 Aligned_cols=40 Identities=15% Similarity=0.109 Sum_probs=30.9
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEccC--cE------EEeeEEEEecCCCc
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLENG--QC------YAGDLLIGADGIWS 82 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~dg--~~------~~adlvVgADG~~S 82 (502)
.+.++.++.+. .+++.++|++.+| ++ +++|.||.|+|+++
T Consensus 110 gv~~~~g~~~~---~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 110 KVTYYKGNGSF---EDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp TCEEEESEEEE---SSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred CCEEEEEEEEE---ccCCeEEEEecCCCcccccccceEEeCEEEECcCCCC
Confidence 45677777654 2566788888777 56 99999999999876
No 213
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=52.72 E-value=22 Score=33.20 Aligned_cols=53 Identities=19% Similarity=0.122 Sum_probs=37.4
Q ss_pred HHHHHHHhccCCCeEecCCeEEEEEeeCCeEE-EEEcc-----CcEEEeeEEEEecCCCc
Q 010723 29 TLQQILAKAVGDEIILNESNVIDFKDHGDKVS-VVLEN-----GQCYAGDLLIGADGIWS 82 (502)
Q Consensus 29 ~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v~-v~~~d-----g~~~~adlvVgADG~~S 82 (502)
.+.+.|.+. ..+.++.++++++++.+++++. |++.+ ++++.+|+||-|-|...
T Consensus 213 ~~~~~l~~~-~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 213 IMQKRAEKN-EKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp HHHHHHHHC-TTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEE
T ss_pred HHHHHHHhc-CCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCC
Confidence 344444332 2467899999999998776544 66665 35789999999998753
No 214
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=52.23 E-value=19 Score=37.93 Aligned_cols=56 Identities=18% Similarity=0.272 Sum_probs=39.5
Q ss_pred HHHHHHHhccC---CC-eEecCCeEEEEEeeCC---eEE-EE---EccCc--EEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAVG---DE-IILNESNVIDFKDHGD---KVS-VV---LENGQ--CYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~~---~~-~v~~~~~v~~i~~~~~---~v~-v~---~~dg~--~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+. ++ .++.++.|+++..+++ .|. |. ..+|+ .+.|+.||.|+|..|.+
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 34455554431 46 7999999999987765 543 22 24665 68999999999999864
No 215
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=51.74 E-value=12 Score=36.40 Aligned_cols=39 Identities=18% Similarity=0.204 Sum_probs=33.4
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCC
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGI 80 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~ 80 (502)
++.++.+++|++++.+.. +|++++|+++.+|.||-|-|+
T Consensus 76 ~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 76 NIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp TCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCC
Confidence 356889999999987665 567789999999999999997
No 216
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=51.42 E-value=14 Score=37.29 Aligned_cols=54 Identities=20% Similarity=0.276 Sum_probs=37.8
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeE-EEEEccCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v-~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.++++++|++++. ++.+ .+.+ +|+++.+|.||-|-|....+
T Consensus 237 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~ 293 (490)
T 2bc0_A 237 DLTDLMAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGFRPNT 293 (490)
T ss_dssp HHHHHHHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCCCcCh
Confidence 3444554444 2367999999999986 3333 3444 78899999999999976543
No 217
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=50.51 E-value=12 Score=37.88 Aligned_cols=43 Identities=26% Similarity=0.163 Sum_probs=35.3
Q ss_pred CeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 41 EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 41 ~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
+.++++++|++++.++....+.+.+|+++.+|+||-|-|..+.
T Consensus 272 V~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~ 314 (493)
T 1y56_A 272 IDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPD 314 (493)
T ss_dssp CEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEEC
T ss_pred cEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcC
Confidence 5688999999998665444567888999999999999998754
No 218
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=49.26 E-value=24 Score=33.58 Aligned_cols=44 Identities=20% Similarity=0.194 Sum_probs=33.7
Q ss_pred CCeEecCCeEEEEEeeCCeE-EEEE--ccC--cEEEeeEEEEecCCCch
Q 010723 40 DEIILNESNVIDFKDHGDKV-SVVL--ENG--QCYAGDLLIGADGIWSK 83 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v-~v~~--~dg--~~~~adlvVgADG~~S~ 83 (502)
.+.+++++++++++.+++.+ .|++ .+| +++.+|+||-|-|....
T Consensus 216 gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~ 264 (360)
T 3ab1_A 216 TIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSN 264 (360)
T ss_dssp SEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCS
T ss_pred ceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCC
Confidence 36789999999998876643 3455 477 57899999999997643
No 219
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=48.96 E-value=31 Score=34.54 Aligned_cols=55 Identities=20% Similarity=0.053 Sum_probs=39.3
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCe--EEEEEcc---C----cEEEeeEEEEecCCCch
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDK--VSVVLEN---G----QCYAGDLLIGADGIWSK 83 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~--v~v~~~d---g----~~~~adlvVgADG~~S~ 83 (502)
.+.+.+.+.+ ..+.++.+++|++++.++++ +.+++.+ | +++.+|.||-|-|....
T Consensus 229 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 229 MISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccC
Confidence 3444444443 24679999999999876655 6777775 2 57899999999997543
No 220
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=47.03 E-value=16 Score=35.92 Aligned_cols=41 Identities=20% Similarity=0.208 Sum_probs=33.3
Q ss_pred CeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 41 EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 41 ~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
+.++.+++|++++.+.. +|++++|+++.+|.||.|.|.+..
T Consensus 74 v~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~~~ 114 (408)
T 2gqw_A 74 VEWLLGVTAQSFDPQAH--TVALSDGRTLPYGTLVLATGAAPR 114 (408)
T ss_dssp CEEEETCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEEC
T ss_pred CEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCCC
Confidence 56888999999976554 466778889999999999998543
No 221
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=46.73 E-value=30 Score=34.73 Aligned_cols=54 Identities=24% Similarity=0.373 Sum_probs=37.5
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeE-EEEEccCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v-~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.++++++|++++.+ +.+ .+.+ ++.++.+|.||.|-|..+..
T Consensus 228 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~D~vi~a~G~~p~~ 284 (480)
T 3cgb_A 228 DMAEYIYKEADKHHIEILTNENVKAFKGN-ERVEAVET-DKGTYKADLVLVSVGVKPNT 284 (480)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEES-SBEEEEEE-TTEEEECSEEEECSCEEESC
T ss_pred HHHHHHHHHHHHcCcEEEcCCEEEEEEcC-CcEEEEEE-CCCEEEcCEEEECcCCCcCh
Confidence 3444554444 24678999999999875 344 3444 45689999999999986543
No 222
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=46.30 E-value=49 Score=30.42 Aligned_cols=43 Identities=14% Similarity=-0.007 Sum_probs=33.1
Q ss_pred CCeEecCCeEEEEEeeCCeE-EEEEc---cCc--EEEeeEEEEecCCCc
Q 010723 40 DEIILNESNVIDFKDHGDKV-SVVLE---NGQ--CYAGDLLIGADGIWS 82 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v-~v~~~---dg~--~~~adlvVgADG~~S 82 (502)
.+.+++++++++++.+++++ .+++. +|+ ++.+|.||-|-|...
T Consensus 193 gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 241 (311)
T 2q0l_A 193 KIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDV 241 (311)
T ss_dssp TEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred CeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCcc
Confidence 46788999999998875654 45665 675 789999999998753
No 223
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=46.20 E-value=35 Score=35.79 Aligned_cols=50 Identities=18% Similarity=0.039 Sum_probs=37.2
Q ss_pred HHHHHHHHhcc--CCCeEecCCeEEEEEeeC--CeEE-EEEccCcEEEeeEEEEe
Q 010723 28 MTLQQILAKAV--GDEIILNESNVIDFKDHG--DKVS-VVLENGQCYAGDLLIGA 77 (502)
Q Consensus 28 ~~L~~~L~~~~--~~~~v~~~~~v~~i~~~~--~~v~-v~~~dg~~~~adlvVgA 77 (502)
..|-+.|.+.+ ..+++++++.|..|..++ +.++ |+..+|++++||.||..
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~ 432 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIE 432 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEE
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEC
Confidence 36666666544 246799999999998776 5554 44577999999999983
No 224
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=44.92 E-value=21 Score=35.57 Aligned_cols=42 Identities=21% Similarity=0.135 Sum_probs=31.6
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEccC-cEEEeeEEEEecCCCchh
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLENG-QCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~dg-~~~~adlvVgADG~~S~v 84 (502)
.+.++.++.+. + +.+.++++..+| +++++|.||.|.|.++..
T Consensus 105 gv~~~~g~~~~-i--d~~~v~V~~~~G~~~i~~d~lViATGs~p~~ 147 (455)
T 1ebd_A 105 KVEIVKGEAYF-V--DANTVRVVNGDSAQTYTFKNAIIATGSRPIE 147 (455)
T ss_dssp TCEEEESEEEE-E--ETTEEEEEETTEEEEEECSEEEECCCEEECC
T ss_pred CCEEEEEEEEE-c--cCCeEEEEeCCCcEEEEeCEEEEecCCCCCC
Confidence 35677776543 3 467788888888 689999999999986543
No 225
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=43.77 E-value=32 Score=31.79 Aligned_cols=43 Identities=21% Similarity=0.100 Sum_probs=33.9
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEcc---Cc--EEEeeEEEEecCCCc
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLEN---GQ--CYAGDLLIGADGIWS 82 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~d---g~--~~~adlvVgADG~~S 82 (502)
.+.++.++++++++.++....|++.+ |+ ++.+|+||-|-|...
T Consensus 204 gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 251 (323)
T 3f8d_A 204 NVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDP 251 (323)
T ss_dssp TEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEC
T ss_pred CcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCC
Confidence 46789999999998876555577766 76 789999999988754
No 226
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=40.49 E-value=31 Score=34.12 Aligned_cols=53 Identities=19% Similarity=0.277 Sum_probs=37.7
Q ss_pred HHHHHHHhccCC-CeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCc
Q 010723 29 TLQQILAKAVGD-EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWS 82 (502)
Q Consensus 29 ~L~~~L~~~~~~-~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S 82 (502)
.+.+.|.+.+.. +.++.++++++++.++ .+...+.+|+++.+|.||-|-|...
T Consensus 191 ~~~~~l~~~l~~~v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~~p 244 (449)
T 3kd9_A 191 EVTDILEEKLKKHVNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGIKP 244 (449)
T ss_dssp HHHHHHHHHHTTTSEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHhCcEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCCcc
Confidence 344444444322 6788999999998655 4544466788999999999999754
No 227
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=39.83 E-value=10 Score=35.86 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=30.2
Q ss_pred cCCCEEEEcCCccccCCCchhhhh--HHHHHHHHHHHHHHHhh
Q 010723 199 GRGRVTLLGDSVHAMQPNLGQGGC--MAIEDGYQLAVELEKAC 239 (502)
Q Consensus 199 ~~grvvLvGDAAH~~~P~~GqG~n--~al~Da~~La~~L~~~~ 239 (502)
..++|+.+||||..+++...+|.. -+|.++...|+.+.+++
T Consensus 282 ~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~l 324 (326)
T 3fpz_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHF 324 (326)
T ss_dssp TSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHh
Confidence 357899999999888877776633 24667777777777654
No 228
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=39.28 E-value=67 Score=29.74 Aligned_cols=43 Identities=16% Similarity=0.095 Sum_probs=31.7
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEc---cCc--EEEeeEEEEecCCCc
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLE---NGQ--CYAGDLLIGADGIWS 82 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~---dg~--~~~adlvVgADG~~S 82 (502)
.+.++++++++++..++....|++. +|+ ++.+|.||-|-|...
T Consensus 202 gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 249 (325)
T 2q7v_A 202 KMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVP 249 (325)
T ss_dssp TEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred CceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCC
Confidence 4678899999999875432345554 675 789999999888653
No 229
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=38.47 E-value=15 Score=39.06 Aligned_cols=50 Identities=12% Similarity=-0.100 Sum_probs=34.9
Q ss_pred HHHHHHHhcc-CCCeEecCCeEE--EEEeeCCe-------EEEEE-ccCc--EEEeeEEEEec
Q 010723 29 TLQQILAKAV-GDEIILNESNVI--DFKDHGDK-------VSVVL-ENGQ--CYAGDLLIGAD 78 (502)
Q Consensus 29 ~L~~~L~~~~-~~~~v~~~~~v~--~i~~~~~~-------v~v~~-~dg~--~~~adlvVgAD 78 (502)
.|-+.|.+.+ ....++++++|+ .|.+++++ |+|++ .+|+ +++||.||.|=
T Consensus 348 ~L~~aLa~~l~~g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTv 410 (721)
T 3ayj_A 348 EFIRNLFLKAQNVGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAV 410 (721)
T ss_dssp HHHHHHHHHHHHHTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECS
T ss_pred HHHHHHHHhcccCCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECC
Confidence 4555666654 112367789999 99887555 88844 5676 79999999854
No 230
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=37.76 E-value=19 Score=36.28 Aligned_cols=43 Identities=21% Similarity=0.161 Sum_probs=33.1
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEcc--CcEEEeeEEEEecCCCch
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLEN--GQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~d--g~~~~adlvVgADG~~S~ 83 (502)
.+.++.+++|+.++.+++.+++.. + +.++++|.||.|.|.+..
T Consensus 106 gv~v~~~~~v~~i~~~~~~v~v~~-~g~~~~~~~d~lviAtG~~p~ 150 (490)
T 2bc0_A 106 GAKVYMESPVQSIDYDAKTVTALV-DGKNHVETYDKLIFATGSQPI 150 (490)
T ss_dssp TCEEETTCCEEEEETTTTEEEEEE-TTEEEEEECSEEEECCCEEEC
T ss_pred CCEEEeCCEEEEEECCCCEEEEEe-CCcEEEEECCEEEECCCCCcC
Confidence 356788999999987777766652 3 357999999999997543
No 231
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=37.53 E-value=81 Score=28.79 Aligned_cols=55 Identities=11% Similarity=0.043 Sum_probs=39.7
Q ss_pred eeHHHHHHHHHhccCC--CeEecCCeEEEEEeeC--CeEEEEEccCcEEEeeEEEEecCCC
Q 010723 25 ISRMTLQQILAKAVGD--EIILNESNVIDFKDHG--DKVSVVLENGQCYAGDLLIGADGIW 81 (502)
Q Consensus 25 i~R~~L~~~L~~~~~~--~~v~~~~~v~~i~~~~--~~v~v~~~dg~~~~adlvVgADG~~ 81 (502)
+....+...|.+.+.. ..++.+ +|+++ .++ +.+++++.++.++.+|.||-|-|..
T Consensus 59 ~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 59 MDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGKTELAKAVIVCTGSA 117 (315)
T ss_dssp BCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred CCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCCEEEeCEEEEeeCCC
Confidence 4566777777776543 567777 89999 666 6677534333389999999999984
No 232
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=37.42 E-value=59 Score=32.56 Aligned_cols=55 Identities=15% Similarity=0.169 Sum_probs=38.5
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEee-CCeEEEEEcc---Cc--EEEeeEEEEecCCCch
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDH-GDKVSVVLEN---GQ--CYAGDLLIGADGIWSK 83 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~-~~~v~v~~~d---g~--~~~adlvVgADG~~S~ 83 (502)
.+.+.|.+.+ ..+.++.++++++++.. ++.+.+++.+ |+ ++.+|+||-|-|....
T Consensus 226 ~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 226 QMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPE 288 (488)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcc
Confidence 3444555444 24678999999999874 4457777765 54 4789999999997543
No 233
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=36.77 E-value=39 Score=31.02 Aligned_cols=42 Identities=12% Similarity=0.071 Sum_probs=32.3
Q ss_pred CCeEecCCeEEEEEeeCCeEE-EEEc--cCc--EEEeeEEEEecCCC
Q 010723 40 DEIILNESNVIDFKDHGDKVS-VVLE--NGQ--CYAGDLLIGADGIW 81 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~-v~~~--dg~--~~~adlvVgADG~~ 81 (502)
.+.+++++++++++.+++.+. +++. +|+ ++.+|+||-|=|..
T Consensus 197 gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 197 KIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp TEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred CeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 467899999999988775433 4554 775 78999999998864
No 234
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=36.12 E-value=21 Score=34.45 Aligned_cols=51 Identities=20% Similarity=0.311 Sum_probs=36.7
Q ss_pred HHHHHHHhcc--CCCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 29 TLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 29 ~L~~~L~~~~--~~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
.+.+.|.+.+ ..+.++++++|++++ .+ .+++++|+ +.+|+||.|-|....+
T Consensus 184 ~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~--~v~~~~g~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 184 ELSNMIKDMLEETGVKFFLNSELLEAN--EE--GVLTNSGF-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp HHHHHHHHHHHHTTEEEECSCCEEEEC--SS--EEEETTEE-EECSCEEEECCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEE--ee--EEEECCCE-EEcCEEEECcCCCcCH
Confidence 3444444443 246789999999987 33 36678887 9999999999987654
No 235
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=36.06 E-value=69 Score=29.32 Aligned_cols=53 Identities=19% Similarity=0.233 Sum_probs=35.4
Q ss_pred HHHHHHHhccCCCeEecCCeEEEEEeeCCeE-EEEEcc---Cc--EEEeeEEEEecCCCc
Q 010723 29 TLQQILAKAVGDEIILNESNVIDFKDHGDKV-SVVLEN---GQ--CYAGDLLIGADGIWS 82 (502)
Q Consensus 29 ~L~~~L~~~~~~~~v~~~~~v~~i~~~~~~v-~v~~~d---g~--~~~adlvVgADG~~S 82 (502)
.+.+.|.+ ...+.++.+++++++..+++.+ .+++.+ |+ ++.+|.||-|-|...
T Consensus 184 ~~~~~l~~-~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 242 (310)
T 1fl2_A 184 VLQDKLRS-LKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLP 242 (310)
T ss_dssp HHHHHHHT-CTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred HHHHHHhh-CCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCcc
Confidence 34444433 1346789999999998765544 455554 53 688999999888643
No 236
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=35.97 E-value=28 Score=35.13 Aligned_cols=40 Identities=18% Similarity=0.180 Sum_probs=33.0
Q ss_pred CeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCc
Q 010723 41 EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWS 82 (502)
Q Consensus 41 ~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S 82 (502)
+.++.+++|++++.+.. +|++++|+++.+|.||.|-|++.
T Consensus 105 v~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviATGs~p 144 (493)
T 1m6i_A 105 VAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIATGGTP 144 (493)
T ss_dssp EEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECCCEEE
T ss_pred eEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCC
Confidence 56788999999987655 46678899999999999999754
No 237
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=35.81 E-value=82 Score=28.93 Aligned_cols=56 Identities=14% Similarity=0.182 Sum_probs=36.5
Q ss_pred eHHHHHHHHHhccCC--CeEecCCeEEEEEee-CCeEEEEEccCcEEEeeEEEEecCCC
Q 010723 26 SRMTLQQILAKAVGD--EIILNESNVIDFKDH-GDKVSVVLENGQCYAGDLLIGADGIW 81 (502)
Q Consensus 26 ~R~~L~~~L~~~~~~--~~v~~~~~v~~i~~~-~~~v~v~~~dg~~~~adlvVgADG~~ 81 (502)
.-..|.+...+.+.. ...+...+++.+... .+..++.+.+|+++++|-||-|-|++
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~ 116 (304)
T 4fk1_A 58 KPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQ 116 (304)
T ss_dssp CHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCE
T ss_pred CHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCc
Confidence 334555555544422 223334555566544 45578889999999999999999975
No 238
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=35.74 E-value=33 Score=33.79 Aligned_cols=39 Identities=18% Similarity=0.172 Sum_probs=30.2
Q ss_pred CeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCc
Q 010723 41 EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWS 82 (502)
Q Consensus 41 ~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S 82 (502)
++++. .+|++|+.+.. +|++++|+++.+|.||-|-|+..
T Consensus 71 v~~i~-~~v~~Id~~~~--~V~~~~g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 71 IEFIN-EKAESIDPDAN--TVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp EEEEC-SCEEEEETTTT--EEEETTCCEEECSEEEECCCCEE
T ss_pred cEEEE-eEEEEEECCCC--EEEECCCCEEECCEEEEeCCCCc
Confidence 34544 47888877665 56788999999999999999753
No 239
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=35.32 E-value=30 Score=32.19 Aligned_cols=43 Identities=21% Similarity=0.106 Sum_probs=33.1
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEcc-----CcEEEeeEEEEecCCCc
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLEN-----GQCYAGDLLIGADGIWS 82 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~d-----g~~~~adlvVgADG~~S 82 (502)
.+.++.++++++++.+++...+++.+ ++++.+|+||-|-|...
T Consensus 203 gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 250 (332)
T 3lzw_A 203 KVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVS 250 (332)
T ss_dssp SCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEEC
T ss_pred CeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCC
Confidence 46789999999998776655666665 35789999999888643
No 240
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=34.30 E-value=33 Score=33.89 Aligned_cols=41 Identities=15% Similarity=0.161 Sum_probs=32.3
Q ss_pred CeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCchh
Q 010723 41 EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 84 (502)
Q Consensus 41 ~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 84 (502)
+.++ ..+|++++.+.. +|++++|+++.+|.||.|.|..+..
T Consensus 74 v~~~-~~~v~~id~~~~--~V~~~~g~~i~~d~lviAtG~~~~~ 114 (437)
T 3sx6_A 74 IHFI-AQSAEQIDAEAQ--NITLADGNTVHYDYLMIATGPKLAF 114 (437)
T ss_dssp CEEE-CSCEEEEETTTT--EEEETTSCEEECSEEEECCCCEECG
T ss_pred CEEE-EeEEEEEEcCCC--EEEECCCCEEECCEEEECCCCCcCc
Confidence 4555 468999987655 5678899999999999999996653
No 241
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=32.38 E-value=86 Score=28.89 Aligned_cols=43 Identities=19% Similarity=0.225 Sum_probs=31.7
Q ss_pred CCeEecCCeEEEEEeeCCeE-EEEEc---cCc--EEEeeEEEEecCCCc
Q 010723 40 DEIILNESNVIDFKDHGDKV-SVVLE---NGQ--CYAGDLLIGADGIWS 82 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v-~v~~~---dg~--~~~adlvVgADG~~S 82 (502)
.+.++++++++++..+++.+ .+++. +|+ ++.+|.||-|-|...
T Consensus 204 gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 204 NIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIP 252 (319)
T ss_dssp TCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEE
T ss_pred CcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCcc
Confidence 46789999999998765522 35554 565 689999999888654
No 242
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=31.68 E-value=68 Score=29.01 Aligned_cols=38 Identities=18% Similarity=0.233 Sum_probs=29.7
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCC
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW 81 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~ 81 (502)
.+.++. +++++++.++ .+++.+|+++.+|+||-|=|..
T Consensus 188 gv~i~~-~~v~~i~~~~---~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 188 GVRVET-TRIREIAGHA---DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp TCEEEC-SCEEEEETTE---EEEETTSCEEEESEEEECCEEE
T ss_pred CcEEEc-ceeeeeecCC---eEEeCCCCEEEEEEEEEccCcc
Confidence 355664 8898887533 7788999999999999988864
No 243
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=31.39 E-value=68 Score=31.89 Aligned_cols=43 Identities=14% Similarity=0.035 Sum_probs=30.7
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEcc-C-cEEEeeEEEEecCCCchhh
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLEN-G-QCYAGDLLIGADGIWSKVR 85 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~d-g-~~~~adlvVgADG~~S~vR 85 (502)
.+.++.++.+ .+ +.+.++|++.+ | +++++|.||.|+|.++.+-
T Consensus 111 gv~~~~g~~~-~~--~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p 155 (474)
T 1zmd_A 111 KVVHVNGYGK-IT--GKNQVTATKADGGTQVIDTKNILIATGSEVTPF 155 (474)
T ss_dssp TCEEEESEEE-EE--ETTEEEEECTTSCEEEEEEEEEEECCCEEECCC
T ss_pred CCEEEEEEEE-Ee--cCCEEEEEecCCCcEEEEeCEEEECCCCCCCCC
Confidence 3567776543 33 46678888877 4 5799999999999876543
No 244
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=28.83 E-value=47 Score=32.38 Aligned_cols=40 Identities=18% Similarity=0.279 Sum_probs=33.3
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCC
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW 81 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~ 81 (502)
.+.++.+++|+.++.+.. +|++.+|+++.+|.||-|-|..
T Consensus 71 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 71 RIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp TCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCCc
Confidence 356888999999986655 5677889999999999999975
No 245
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=28.73 E-value=41 Score=33.33 Aligned_cols=44 Identities=16% Similarity=0.050 Sum_probs=33.2
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEc-c--CcEEEeeEEEEecCCCch
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLE-N--GQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~-d--g~~~~adlvVgADG~~S~ 83 (502)
.+.++.+++++.++.+++.+.+... + ++++++|.||.|.|.+..
T Consensus 72 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~ 118 (452)
T 2cdu_A 72 GANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPT 118 (452)
T ss_dssp TCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred CCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcC
Confidence 3567788999999877777766542 2 457999999999997543
No 246
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=28.56 E-value=21 Score=24.60 Aligned_cols=12 Identities=25% Similarity=0.437 Sum_probs=10.1
Q ss_pred cEEeCCCCEEEe
Q 010723 458 PARFRPSDTIEF 469 (502)
Q Consensus 458 ~~~l~~gd~i~~ 469 (502)
...|++||.|.|
T Consensus 46 ~~~L~dgD~v~i 57 (64)
T 2cu3_A 46 DRPLRDGDVVEV 57 (64)
T ss_dssp CCCCCTTCEEEE
T ss_pred CcCCCCCCEEEE
Confidence 467999999976
No 247
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=28.03 E-value=38 Score=34.29 Aligned_cols=42 Identities=17% Similarity=0.060 Sum_probs=30.3
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEccCc----EEEeeEEEEecCCC
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLENGQ----CYAGDLLIGADGIW 81 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~dg~----~~~adlvVgADG~~ 81 (502)
.++++.+++|++++.+.-.+.....||+ ++.||+||-|=|..
T Consensus 286 GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 286 SIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp TCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred ceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCc
Confidence 4679999999998643333344556663 68999999998863
No 248
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=27.96 E-value=55 Score=32.29 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=33.3
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEE-ccCc--EEEeeEEEEecCCCc
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVL-ENGQ--CYAGDLLIGADGIWS 82 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~-~dg~--~~~adlvVgADG~~S 82 (502)
.+.++.++++++++.+++.+++.. .+|+ ++++|.||.|.|.+.
T Consensus 70 gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p 115 (447)
T 1nhp_A 70 GVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVP 115 (447)
T ss_dssp TCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred CCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCc
Confidence 356778999999988777777665 3465 489999999999754
No 249
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=27.61 E-value=72 Score=28.64 Aligned_cols=34 Identities=18% Similarity=0.346 Sum_probs=28.6
Q ss_pred CCCEEEcCCCCCCCCCceeeeCCccccccceEEEEeC-CeEEE
Q 010723 391 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD-GAFYL 432 (502)
Q Consensus 391 ~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~-~~~~i 432 (502)
...++||....|+ |.+++. ..|.+|.+++ +.|.+
T Consensus 20 ~~~~tiG~~~~~~-----itl~~~---~~~i~l~~~~~~~~~v 54 (238)
T 1wv3_A 20 GKTYTISEDERAD-----ITLKSL---GEVIHLEQNNQGTWQA 54 (238)
T ss_dssp TCCEEEESCTTSS-----EECTTC---CCCEEEEECTTSCEEE
T ss_pred CcEEEECCCccce-----EEecCC---CccEEEEEccCCeEEE
Confidence 4569999999998 999876 7888999887 77887
No 250
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=26.53 E-value=76 Score=29.42 Aligned_cols=44 Identities=16% Similarity=0.105 Sum_probs=32.2
Q ss_pred CCeEecCCeEEEEEeeCC--eE-EEEEc---cC--cEEEeeEEEEecCCCch
Q 010723 40 DEIILNESNVIDFKDHGD--KV-SVVLE---NG--QCYAGDLLIGADGIWSK 83 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~--~v-~v~~~---dg--~~~~adlvVgADG~~S~ 83 (502)
.+.+++++++++++.+++ .+ .+++. +| +++.+|+||-|-|....
T Consensus 209 gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 260 (333)
T 1vdc_A 209 KIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPA 260 (333)
T ss_dssp TEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEES
T ss_pred CeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccc
Confidence 467889999999987664 43 25554 45 47899999999987543
No 251
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=26.13 E-value=66 Score=31.48 Aligned_cols=40 Identities=13% Similarity=-0.042 Sum_probs=28.8
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEcc--CcEEEeeEEEEecCCC
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLEN--GQCYAGDLLIGADGIW 81 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~d--g~~~~adlvVgADG~~ 81 (502)
.++++++++|++++. +++++...+ ++++.+|+||-|-|..
T Consensus 214 GV~i~~~~~v~~v~~--~~v~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 214 NIDWIANVAVKAIEP--DKVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp TCEEECSCEEEEECS--SEEEEECTTSCEEEEECSEEEEECEEE
T ss_pred CCEEEeCCEEEEEeC--CeEEEEecCCCceEEeeeEEEECCCCc
Confidence 467999999999854 444443211 6789999999987754
No 252
>2k9x_A Tburm1, uncharacterized protein; unknown function; NMR {Trypanosoma brucei}
Probab=25.95 E-value=30 Score=27.02 Aligned_cols=26 Identities=23% Similarity=0.300 Sum_probs=18.4
Q ss_pred eeecCCCCceeecCCCCcEEeCCCCEEEe
Q 010723 441 TYVTDNEGRRYRVSSNFPARFRPSDTIEF 469 (502)
Q Consensus 441 t~vn~~~~~~~~~~~~~~~~l~~gd~i~~ 469 (502)
++|||. -|++..+..++|++||.|.|
T Consensus 70 VLVNg~---d~e~l~gldt~L~dgD~V~f 95 (110)
T 2k9x_A 70 VLVNSC---DAEVVGGMDYVLNDGDTVEF 95 (110)
T ss_dssp EEESSS---BHHHHTSSCCCCCSSCEEEE
T ss_pred EEECCe---eeeccCCcccCCCCcCEEEE
Confidence 677886 11222556788999999988
No 253
>2co3_A SAFA pilus subunit; adhesion, pathogenesis, fibril protein, fold complementation; 1.78A {Salmonella typhimurium} SCOP: b.2.3.2 PDB: 3cre_B 3crf_B 2co7_A 3cre_A 3crf_A 2cnz_A 2cny_A 2co1_A 2co2_A 2co4_A 2co6_A
Probab=25.63 E-value=38 Score=27.02 Aligned_cols=37 Identities=5% Similarity=0.122 Sum_probs=31.3
Q ss_pred eeeCCccccccceEEEEeCCeEEEEEcCCccceeecC
Q 010723 409 IVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTD 445 (502)
Q Consensus 409 i~~~~~~vSr~Ha~i~~~~~~~~i~d~~s~nGt~vn~ 445 (502)
+.+....+++.|+...+.+-+|++.|.+++-...+-|
T Consensus 80 V~fs~~~~~~~~~~~~~ng~~W~tfdtnd~l~i~l~G 116 (137)
T 2co3_A 80 VGLSSDSLRRSDSTEKWNGVNWMTFNSNDTLDIVLTG 116 (137)
T ss_dssp EEECHHHHTTCCEEEEETTEEEEEEESSEEEEEEECS
T ss_pred EEEecccccCCCCccccCCceEEEEecCCcEEEEEec
Confidence 5667789999999888889999999998877776666
No 254
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=25.61 E-value=57 Score=31.95 Aligned_cols=40 Identities=18% Similarity=0.154 Sum_probs=30.9
Q ss_pred CeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 41 EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 41 ~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
+.++. .+|+.++.+.. +|++++|+++.+|.||.|.|....
T Consensus 71 v~~~~-~~v~~id~~~~--~v~~~~g~~i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 71 IEFIN-EKAESIDPDAN--TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp EEEEC-SCEEEEETTTT--EEEETTCCEEECSEEEECCCCEEE
T ss_pred CEEEE-EEEEEEECCCC--EEEECCCcEEECCEEEEcCCcccc
Confidence 34554 48888876655 567788989999999999998744
No 255
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=24.52 E-value=46 Score=23.54 Aligned_cols=23 Identities=17% Similarity=0.388 Sum_probs=16.1
Q ss_pred eeecCCCCceeecCCCCcEEeCCCCEEEe
Q 010723 441 TYVTDNEGRRYRVSSNFPARFRPSDTIEF 469 (502)
Q Consensus 441 t~vn~~~~~~~~~~~~~~~~l~~gd~i~~ 469 (502)
..||+. .+. .....|++||+|.|
T Consensus 45 vavN~~-----~v~-~~~~~l~~gDeV~i 67 (74)
T 3rpf_C 45 IALNDH-----LID-NLNTPLKDGDVISL 67 (74)
T ss_dssp EEESSS-----EEC-CTTCCCCTTCEEEE
T ss_pred EEECCE-----EcC-CCCcCCCCCCEEEE
Confidence 556776 543 34568999999976
No 256
>3mml_A Allophanate hydrolase subunit 2; structural genomics, PSI-2, protein structure initiative, tuberculosis structural genomics consortium; 2.50A {Mycobacterium smegmatis}
Probab=24.51 E-value=1e+02 Score=29.04 Aligned_cols=32 Identities=13% Similarity=0.164 Sum_probs=26.7
Q ss_pred CCccceeecCCCCceeecCCCCcEEeCCCCEEEeCCC
Q 010723 436 QSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 472 (502)
Q Consensus 436 ~s~nGt~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~ 472 (502)
|..-...|||. .++...++.++.||+++||..
T Consensus 78 GA~~~~~ldg~-----~v~~~~~~~v~~G~~L~~g~~ 109 (318)
T 3mml_A 78 GADTDPAVNGI-----PFGTNSIHHVHDGQVISLGAP 109 (318)
T ss_dssp ESCCCCEETTE-----ECCTTSCEEECTTCEEECCCC
T ss_pred CCCCcceECCE-----EcCCCeEEEECCCCEEEeCCC
Confidence 44455668998 898899999999999999974
No 257
>2k5p_A THis protein, thiamine-biosynthesis protein; NESG, GMR137, structural genomics, PSI-2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 3cwi_A
Probab=24.07 E-value=25 Score=25.50 Aligned_cols=26 Identities=12% Similarity=0.193 Sum_probs=18.1
Q ss_pred eeecCCCCceeecCCCC--cEEeCCCCEEEeCC
Q 010723 441 TYVTDNEGRRYRVSSNF--PARFRPSDTIEFGS 471 (502)
Q Consensus 441 t~vn~~~~~~~~~~~~~--~~~l~~gd~i~~g~ 471 (502)
+.+|+. .+++.. ...|++||.|.|=.
T Consensus 37 VavNg~-----iVpr~~~~~~~L~dGD~IEIv~ 64 (78)
T 2k5p_A 37 VELNGE-----VLEREAFDATTVKDGDAVEFLY 64 (78)
T ss_dssp EEETTE-----ECCTTHHHHCEECSSBCEEECC
T ss_pred EEECCE-----ECChHHcCcccCCCCCEEEEEe
Confidence 567776 665432 36899999998743
No 258
>2q5w_D Molybdopterin converting factor, subunit 1; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_B*
Probab=23.98 E-value=44 Score=23.67 Aligned_cols=22 Identities=23% Similarity=0.395 Sum_probs=16.2
Q ss_pred eeecCCCCceeecCCCCcEEeCCCCEEEe
Q 010723 441 TYVTDNEGRRYRVSSNFPARFRPSDTIEF 469 (502)
Q Consensus 441 t~vn~~~~~~~~~~~~~~~~l~~gd~i~~ 469 (502)
..||+. .++. ...|++||.|.|
T Consensus 49 v~vNg~-----~v~~--~~~L~~gD~V~i 70 (77)
T 2q5w_D 49 VAVNEE-----FVQK--SDFIQPNDTVAL 70 (77)
T ss_dssp EEETTE-----EECT--TSEECTTCEEEE
T ss_pred EEECCE-----ECCC--CCCcCCCCEEEE
Confidence 567776 5554 368999999876
No 259
>2l52_A Methanosarcina acetivorans SAMP1 homolog; beta-grAsp fold, protein binding, E1-like, SAMP activator, ELSA, adenylation, ubiquitin; NMR {Methanosarcina acetivorans}
Probab=23.95 E-value=35 Score=25.91 Aligned_cols=27 Identities=15% Similarity=0.236 Sum_probs=18.2
Q ss_pred cceeecCCCCceeecCC--CCcEEeCCCCEEEeC
Q 010723 439 HGTYVTDNEGRRYRVSS--NFPARFRPSDTIEFG 470 (502)
Q Consensus 439 nGt~vn~~~~~~~~~~~--~~~~~l~~gd~i~~g 470 (502)
+-..||+. .++. .....|++||.|.|=
T Consensus 65 ~~v~VNg~-----~v~~~~~~~~~L~~gD~V~i~ 93 (99)
T 2l52_A 65 INILINGN-----NIRHLEGLETLLKDSDEIGIL 93 (99)
T ss_dssp CEEEETTS-----CGGGTTSTTSCCCTTEEEEEE
T ss_pred cEEEECCE-----EccccCCCCCCCCCCCEEEEE
Confidence 34677876 4421 345689999999873
No 260
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=23.67 E-value=57 Score=33.29 Aligned_cols=34 Identities=26% Similarity=0.268 Sum_probs=26.4
Q ss_pred CCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCch
Q 010723 46 ESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 83 (502)
Q Consensus 46 ~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 83 (502)
+..++.|+. ++ |.++||+++++|+||-|-|.+..
T Consensus 352 ~~~I~~it~--~g--v~~~dG~~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 352 ENPIREVTA--KG--VVTEDGVLHELDVLVFATGFDAV 385 (540)
T ss_dssp TSCEEEECS--SE--EEETTCCEEECSEEEECCCBSCS
T ss_pred CCCccEEec--Ce--EEcCCCCEEECCEEEECCccCcc
Confidence 466666643 33 67889999999999999998754
No 261
>3nk4_C ZONA pellucida 3; fertilization, oocyte, egg coat, vitelline E ZP domain, ZP module, egg-sperm interaction, species-specif recognition, speciation; HET: A2G FLC; 2.00A {Gallus gallus} PDB: 3nk3_C*
Probab=23.55 E-value=38 Score=18.57 Aligned_cols=12 Identities=42% Similarity=0.708 Sum_probs=7.7
Q ss_pred cCcEEEeeEEEE
Q 010723 65 NGQCYAGDLLIG 76 (502)
Q Consensus 65 dg~~~~adlvVg 76 (502)
.|+++.+|+|||
T Consensus 6 agkevaadvvig 17 (30)
T 3nk4_C 6 AGKEVAADVVIG 17 (30)
T ss_dssp ---CEEEEEEEE
T ss_pred cccceecceEEe
Confidence 367788888887
No 262
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=23.47 E-value=1.2e+02 Score=29.73 Aligned_cols=39 Identities=10% Similarity=0.193 Sum_probs=31.4
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCc
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWS 82 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S 82 (502)
.+.++.+++|++++. + .+++++|+++.+|+||-|=|...
T Consensus 202 gV~i~~~~~v~~~~~--~--~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 202 EIPYRLNEEINAING--N--EITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp TCCEEESCCEEEEET--T--EEEETTSCEEECSEEEECCCEEE
T ss_pred ceEEEeccEEEEecC--C--eeeecCCeEEeeeeEEEEeceec
Confidence 356889999988753 3 46788999999999999998653
No 263
>1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2
Probab=22.64 E-value=48 Score=23.21 Aligned_cols=22 Identities=18% Similarity=0.061 Sum_probs=15.0
Q ss_pred eeecCCCCceeecCCCCcEEeCCCCEEEe
Q 010723 441 TYVTDNEGRRYRVSSNFPARFRPSDTIEF 469 (502)
Q Consensus 441 t~vn~~~~~~~~~~~~~~~~l~~gd~i~~ 469 (502)
+.+|+. .+++.. .|++||.|.|
T Consensus 42 vavN~~-----~v~~~~--~L~~gD~V~i 63 (70)
T 1ryj_A 42 VKKNGQ-----IVIDEE--EIFDGDIIEV 63 (70)
T ss_dssp EEETTE-----ECCTTS--BCCTTCEEEE
T ss_pred EEECCE-----ECCCcc--cCCCCCEEEE
Confidence 445665 555433 7999999876
No 264
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=22.59 E-value=73 Score=30.94 Aligned_cols=40 Identities=20% Similarity=0.128 Sum_probs=32.7
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCC
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW 81 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~ 81 (502)
.+.++.+++|+.++.+.. +|++.+|+++.+|.||-|-|..
T Consensus 79 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 118 (415)
T 3lxd_A 79 AVEMKLGAEVVSLDPAAH--TVKLGDGSAIEYGKLIWATGGD 118 (415)
T ss_dssp TEEEEETCCEEEEETTTT--EEEETTSCEEEEEEEEECCCEE
T ss_pred CcEEEeCCEEEEEECCCC--EEEECCCCEEEeeEEEEccCCc
Confidence 356888999999976654 5677889999999999999964
No 265
>1wgk_A Riken cDNA 2900073H19 protein; THis domain, ubiqutin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.3.3 PDB: 1xo3_A
Probab=22.44 E-value=33 Score=26.93 Aligned_cols=26 Identities=15% Similarity=0.439 Sum_probs=17.8
Q ss_pred eeecCCCCceeecCCCCcEEeCCCCEEEe
Q 010723 441 TYVTDNEGRRYRVSSNFPARFRPSDTIEF 469 (502)
Q Consensus 441 t~vn~~~~~~~~~~~~~~~~l~~gd~i~~ 469 (502)
++||+.. ++...+..++|++||.|.|
T Consensus 76 VlVN~~d---i~~l~gldt~L~dGDeV~i 101 (114)
T 1wgk_A 76 VLINDAD---WELLGELDYQLQDQDSILF 101 (114)
T ss_dssp EEESSSB---HHHHCTTTCBCCSSEEEEE
T ss_pred EEECCee---eeccCCcCcCCCCCCEEEE
Confidence 6778761 1222455688999999887
No 266
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=22.34 E-value=22 Score=25.46 Aligned_cols=25 Identities=16% Similarity=0.093 Sum_probs=17.0
Q ss_pred eeecCCCCceeecCCCC--cEEeCCCCEEEeC
Q 010723 441 TYVTDNEGRRYRVSSNF--PARFRPSDTIEFG 470 (502)
Q Consensus 441 t~vn~~~~~~~~~~~~~--~~~l~~gd~i~~g 470 (502)
+.+|+. .+++.. ...|++||.|.|=
T Consensus 33 V~vNg~-----iVpr~~~~~~~L~dGD~veIv 59 (73)
T 2kl0_A 33 VALNYD-----VVPRGKWDETPVTAGDEIEIL 59 (73)
T ss_dssp EEESSS-----EECHHHHTTCBCCTTCEEEEE
T ss_pred EEECCE-----ECChHHcCcccCCCCCEEEEE
Confidence 556776 555432 3689999999873
No 267
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=22.34 E-value=98 Score=32.52 Aligned_cols=58 Identities=16% Similarity=0.274 Sum_probs=39.6
Q ss_pred HHHHHHHHHhcc----CCCeEecCCeEEEEEeeCC---eEE-E--E-EccCc--EEEeeEEEEecCCCchh
Q 010723 27 RMTLQQILAKAV----GDEIILNESNVIDFKDHGD---KVS-V--V-LENGQ--CYAGDLLIGADGIWSKV 84 (502)
Q Consensus 27 R~~L~~~L~~~~----~~~~v~~~~~v~~i~~~~~---~v~-v--~-~~dg~--~~~adlvVgADG~~S~v 84 (502)
...+.+.|.+++ .++.++.++.|+++..+++ .+. | . ..+|+ .+.|+.||.|.|..|.+
T Consensus 165 G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 165 GESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp ETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 345555555543 2567889999999887665 433 2 2 24554 58999999999998864
No 268
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=21.99 E-value=1.3e+02 Score=31.47 Aligned_cols=40 Identities=23% Similarity=0.196 Sum_probs=31.3
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEccC--cEEEeeEEEEecCCCc
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLENG--QCYAGDLLIGADGIWS 82 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~dg--~~~~adlvVgADG~~S 82 (502)
.+.++.+++|++++ +++++++ .+| +++.+|.||-|=|...
T Consensus 587 GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 587 GVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp TCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEEE
T ss_pred CCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCccc
Confidence 46789999999986 4566665 677 5789999999988754
No 269
>2g1e_A Hypothetical protein TA0895; MOAD, molybdopterin, transferase; NMR {Thermoplasma acidophilum} PDB: 2k22_A
Probab=21.32 E-value=49 Score=24.25 Aligned_cols=24 Identities=21% Similarity=0.473 Sum_probs=16.5
Q ss_pred eeecCCCCceeecCC--CCcEEeCCCCEEEe
Q 010723 441 TYVTDNEGRRYRVSS--NFPARFRPSDTIEF 469 (502)
Q Consensus 441 t~vn~~~~~~~~~~~--~~~~~l~~gd~i~~ 469 (502)
..||+. .++. .....|++||.|.|
T Consensus 58 v~vN~~-----~v~~~~~~~~~l~~gD~V~i 83 (90)
T 2g1e_A 58 ILVNGN-----NITSMKGLDTEIKDDDKIDL 83 (90)
T ss_dssp EEESSS-----BGGGTCSSSCBCCTTCEEEE
T ss_pred EEECCE-----EccccCCCCcCCCCCCEEEE
Confidence 566776 4431 34568999999987
No 270
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=21.24 E-value=66 Score=30.78 Aligned_cols=38 Identities=16% Similarity=-0.024 Sum_probs=30.1
Q ss_pred CeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCC
Q 010723 41 EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW 81 (502)
Q Consensus 41 ~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~ 81 (502)
+.++.+++|+.++.+.. +|+ .+|+++++|.||-|-|++
T Consensus 75 v~~~~g~~v~~id~~~~--~V~-~~g~~~~~d~lViATGs~ 112 (367)
T 1xhc_A 75 IEIRLAEEAKLIDRGRK--VVI-TEKGEVPYDTLVLATGAR 112 (367)
T ss_dssp EEEECSCCEEEEETTTT--EEE-ESSCEEECSEEEECCCEE
T ss_pred cEEEECCEEEEEECCCC--EEE-ECCcEEECCEEEECCCCC
Confidence 46788888998876544 344 678899999999999964
No 271
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=21.16 E-value=81 Score=31.10 Aligned_cols=42 Identities=21% Similarity=0.194 Sum_probs=33.7
Q ss_pred CeEecCCeEEEEEeeCCeEEEEEc-cCcEEEeeEEEEecCCCc
Q 010723 41 EIILNESNVIDFKDHGDKVSVVLE-NGQCYAGDLLIGADGIWS 82 (502)
Q Consensus 41 ~~v~~~~~v~~i~~~~~~v~v~~~-dg~~~~adlvVgADG~~S 82 (502)
..++.+++|++++.+...+++... ++.++++|.||-|-|...
T Consensus 73 i~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 73 IQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQ 115 (452)
T ss_dssp EEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCB
T ss_pred CEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCccc
Confidence 457789999999988887777632 456899999999999854
No 272
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=20.90 E-value=1.2e+02 Score=27.60 Aligned_cols=57 Identities=14% Similarity=0.089 Sum_probs=39.1
Q ss_pred eeHHHHHHHHHhccC--CCeEecCCeEEEEEeeCCeEEEEEccCcEEEeeEEEEecCCCc
Q 010723 25 ISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWS 82 (502)
Q Consensus 25 i~R~~L~~~L~~~~~--~~~v~~~~~v~~i~~~~~~v~v~~~dg~~~~adlvVgADG~~S 82 (502)
+.-.+|...+.+.+. ...+. ..++..+....+...+...++.++.+|-||-|-|++.
T Consensus 63 i~~~~l~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 63 IDGNELMMNMRTQSEKYGTTII-TETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATA 121 (314)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEE-CCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEE
T ss_pred CCHHHHHHHHHHHHhhcCcEEE-EeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccc
Confidence 344566655555442 23343 4567777766777778888899999999999999753
No 273
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=20.59 E-value=50 Score=25.08 Aligned_cols=28 Identities=11% Similarity=0.145 Sum_probs=21.0
Q ss_pred ccceeecCCCCceeecCCCCcEEeCCCCEEEeCCC
Q 010723 438 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 472 (502)
Q Consensus 438 ~nGt~vn~~~~~~~~~~~~~~~~l~~gd~i~~g~~ 472 (502)
.+-+.|||+ .++ ....|++||.|.|=..
T Consensus 58 ~~~V~Vng~-----~v~--~d~~L~dGDRVEIyrp 85 (97)
T 2hj1_A 58 TNKIGIFSR-----PIK--LTDVLKEGDRIEIYRP 85 (97)
T ss_dssp TSEEEEEEC-----SCC--TTCBCCTTCEEEECCC
T ss_pred ccEEEEcCE-----ECC--CCccCCCCCEEEEEec
Confidence 456788997 665 3567999999988654
No 274
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=20.54 E-value=95 Score=21.47 Aligned_cols=29 Identities=17% Similarity=0.331 Sum_probs=23.2
Q ss_pred CCeEecCCeEEEEEeeCCeEEEEEccCcE
Q 010723 40 DEIILNESNVIDFKDHGDKVSVVLENGQC 68 (502)
Q Consensus 40 ~~~v~~~~~v~~i~~~~~~v~v~~~dg~~ 68 (502)
.....+..+++++...+.-.+|.|+||++
T Consensus 22 Gd~~yYparI~Si~s~~~~Y~V~fKdgT~ 50 (66)
T 2l8d_A 22 GSVLYYEVQVTSYDDASHLYTVKYKDGTE 50 (66)
T ss_dssp TSSCEEEEEEEEEETTTTEEEEEETTSCE
T ss_pred CCccceEEEEEEeccCCceEEEEecCCCE
Confidence 34467788999999777788899999864
Done!