Query         010727
Match_columns 502
No_of_seqs    181 out of 1987
Neff          11.4
Searched_HMMs 46136
Date          Fri Mar 29 03:52:43 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010727.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010727hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 3.3E-89 7.1E-94  642.0  47.5  464   21-501    21-487 (489)
  2 PLN03234 cytochrome P450 83B1; 100.0 2.3E-83   5E-88  626.1  49.2  483   12-502    14-499 (499)
  3 PLN02183 ferulate 5-hydroxylas 100.0 8.2E-82 1.8E-86  615.3  47.4  472   16-501    26-511 (516)
  4 KOG0158 Cytochrome P450 CYP3/C 100.0 1.9E-81   4E-86  579.6  40.9  460   22-502    27-499 (499)
  5 PLN02971 tryptophan N-hydroxyl 100.0 8.1E-81 1.7E-85  610.1  47.0  471   25-501    56-533 (543)
  6 PLN02966 cytochrome P450 83A1  100.0 1.4E-80 3.1E-85  605.2  47.9  470   21-501    24-497 (502)
  7 PLN02687 flavonoid 3'-monooxyg 100.0 2.8E-80   6E-85  604.7  48.0  468   26-501    34-508 (517)
  8 PLN00110 flavonoid 3',5'-hydro 100.0 6.6E-80 1.4E-84  598.1  48.2  467   22-501    27-496 (504)
  9 PLN03112 cytochrome P450 famil 100.0 3.7E-79 7.9E-84  598.2  48.3  472   25-501    31-507 (514)
 10 PTZ00404 cytochrome P450; Prov 100.0   4E-78 8.7E-83  586.6  46.2  457   21-501    24-482 (482)
 11 PLN00168 Cytochrome P450; Prov 100.0 5.6E-78 1.2E-82  588.7  46.8  467   24-502    33-517 (519)
 12 PLN02394 trans-cinnamate 4-mon 100.0 1.9E-77 4.2E-82  585.0  47.1  473   17-502    21-502 (503)
 13 PLN02290 cytokinin trans-hydro 100.0 3.9E-77 8.5E-82  584.1  41.2  454   24-502    40-515 (516)
 14 PLN02655 ent-kaurene oxidase   100.0 2.9E-76 6.2E-81  569.5  43.6  459   28-502     1-464 (466)
 15 KOG0159 Cytochrome P450 CYP11/ 100.0 1.5E-76 3.2E-81  533.3  35.0  452   28-501    52-517 (519)
 16 PLN03018 homomethionine N-hydr 100.0 8.6E-75 1.9E-79  562.8  48.7  471   25-501    39-523 (534)
 17 KOG0157 Cytochrome P450 CYP4/C 100.0 2.9E-76 6.3E-81  567.3  34.8  453   24-502    33-496 (497)
 18 PLN02500 cytochrome P450 90B1  100.0 2.9E-75 6.3E-80  566.7  40.5  437   24-500    36-488 (490)
 19 PLN02774 brassinosteroid-6-oxi 100.0 3.8E-74 8.3E-79  554.3  41.2  432   22-500    27-462 (463)
 20 PLN02169 fatty acid (omega-1)- 100.0 4.9E-74 1.1E-78  555.8  40.3  462   19-502    24-500 (500)
 21 PLN03195 fatty acid omega-hydr 100.0 3.3E-74 7.2E-79  563.0  38.6  458   25-502    29-516 (516)
 22 PLN02738 carotene beta-ring hy 100.0 1.3E-73 2.8E-78  560.0  41.0  439   38-501   143-594 (633)
 23 PF00067 p450:  Cytochrome P450 100.0   5E-75 1.1E-79  568.6  28.9  456   28-498     1-463 (463)
 24 PLN02196 abscisic acid 8'-hydr 100.0 1.7E-72 3.7E-77  542.2  40.0  426   25-501    34-462 (463)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 8.8E-72 1.9E-76  536.7  38.9  435   22-501     3-449 (452)
 26 PLN02302 ent-kaurenoic acid ox 100.0 5.2E-71 1.1E-75  539.8  43.4  436   25-501    41-487 (490)
 27 KOG0684 Cytochrome P450 [Secon 100.0 1.7E-71 3.6E-76  487.8  34.4  445   26-502    31-485 (486)
 28 PLN02987 Cytochrome P450, fami 100.0   1E-70 2.2E-75  527.5  42.4  432   25-501    29-468 (472)
 29 PLN02936 epsilon-ring hydroxyl 100.0 7.5E-71 1.6E-75  534.0  37.7  453   25-501    11-481 (489)
 30 PLN02426 cytochrome P450, fami 100.0 1.8E-68 3.9E-73  516.0  41.9  442   33-502    48-500 (502)
 31 PLN02648 allene oxide synthase 100.0 3.2E-61   7E-66  457.8  31.2  400   25-473    16-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.2E-55 2.5E-60  415.4  33.6  360   48-472    24-387 (411)
 33 PF05084 GRA6:  Granule antigen  66.0      11 0.00023   29.5   3.9   31    3-33    154-184 (215)
 34 PF12508 DUF3714:  Protein of u  57.6     2.5 5.5E-05   35.3  -0.8   43  352-395    51-93  (200)
 35 PF05952 ComX:  Bacillus compet  52.6      14 0.00031   23.5   2.1   25  316-340     4-28  (57)
 36 PF01102 Glycophorin_A:  Glycop  51.4      13 0.00028   28.2   2.2   15   12-26     80-94  (122)
 37 KOG3506 40S ribosomal protein   44.9     9.5 0.00021   23.7   0.5   11  435-445    12-22  (56)
 38 COG0851 MinE Septum formation   44.9      55  0.0012   23.0   4.2   19  324-342    35-53  (88)
 39 PF12554 MOZART1:  Mitotic-spin  42.9      70  0.0015   19.6   3.9   41  295-335     7-47  (48)
 40 PF09105 SelB-wing_1:  Elongati  41.5      78  0.0017   19.0   5.2   44  249-309     5-48  (61)
 41 PF14483 Cut8_M:  Cut8 dimerisa  37.6      54  0.0012   18.9   2.8   17  317-333    18-35  (38)
 42 PF05545 FixQ:  Cbb3-type cytoc  36.7      52  0.0011   20.2   2.9   20    5-24     15-34  (49)
 43 PF14129 DUF4296:  Domain of un  35.8 1.6E+02  0.0034   20.8   7.1   50  291-340    30-79  (87)
 44 PF12273 RCR:  Chitin synthesis  34.1      29 0.00062   26.9   1.8    7   25-31     29-35  (130)
 45 PRK06789 flagellar motor switc  32.2      48   0.001   22.6   2.3   38  360-397    22-62  (74)
 46 TIGR03779 Bac_Flav_CT_M Bacter  31.2     8.8 0.00019   36.1  -1.7   64  353-417   255-330 (410)
 47 PF14991 MLANA:  Protein melan-  30.7      17 0.00037   26.7   0.1   22    2-23     30-51  (118)
 48 PF09201 SRX:  SRX;  InterPro:   29.0      55  0.0012   25.2   2.4   23  442-464    18-40  (148)
 49 PF15330 SIT:  SHP2-interacting  29.0      86  0.0019   23.3   3.4   11   33-43     45-55  (107)
 50 PF08492 SRP72:  SRP72 RNA-bind  28.6      38 0.00082   21.9   1.3    8  415-422    44-51  (59)
 51 KOG1412 Aspartate aminotransfe  28.1 1.8E+02   0.004   26.4   5.8   65  289-369   342-408 (410)
 52 PF09926 DUF2158:  Uncharacteri  27.5      64  0.0014   20.3   2.2   18   59-76      3-20  (53)
 53 PHA03162 hypothetical protein;  27.3      47   0.001   25.3   1.8   24  438-461     2-25  (135)
 54 PF15102 TMEM154:  TMEM154 prot  27.0      57  0.0012   25.6   2.3    7    2-8      62-68  (146)
 55 PF10777 YlaC:  Inner membrane   26.9      48   0.001   25.9   1.9   39  317-355   114-152 (155)
 56 KOG3653 Transforming growth fa  25.9 1.8E+02   0.004   28.1   5.7   26   58-83    222-248 (534)
 57 PRK09458 pspB phage shock prot  25.9 1.2E+02  0.0026   20.7   3.3   18    2-19      7-24  (75)
 58 PF13625 Helicase_C_3:  Helicas  25.3 1.4E+02   0.003   23.0   4.3   39   48-88     76-114 (129)
 59 PF15102 TMEM154:  TMEM154 prot  25.1      37 0.00081   26.6   1.0   17    3-19     66-82  (146)
 60 PF12444 Sox_N:  Sox developmen  24.0      50  0.0011   23.1   1.4   20  452-471    60-79  (84)
 61 PRK13989 cell division topolog  22.5      66  0.0014   22.6   1.8   20  324-343    36-55  (84)
 62 PF15300 INT_SG_DDX_CT_C:  INTS  22.5      52  0.0011   21.8   1.1   16  352-367    39-54  (65)
 63 PRK13990 cell division topolog  22.4      69  0.0015   22.8   1.8   24  324-347    41-64  (90)
 64 TIGR02976 phageshock_pspB phag  22.2 1.1E+02  0.0025   20.9   2.8    9    3-11      8-16  (75)
 65 PF13893 RRM_5:  RNA recognitio  21.9 2.1E+02  0.0045   17.7   4.9   35   52-86      1-39  (56)
 66 PF05261 Tra_M:  TraM protein,   21.0 3.9E+02  0.0084   20.5   7.6   70  246-315    11-86  (127)
 67 PHA03049 IMV membrane protein;  20.5 1.6E+02  0.0034   19.4   2.9   12   28-39     33-44  (68)
 68 PF04689 S1FA:  DNA binding pro  20.4 1.1E+02  0.0025   19.8   2.3   15   18-32     33-47  (69)
 69 KOG4189 Uncharacterized conser  20.3 5.2E+02   0.011   21.6   6.6   48  291-338   129-178 (209)
 70 PRK02302 hypothetical protein;  20.0 2.1E+02  0.0046   20.4   3.8   35   53-87     20-54  (89)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.3e-89  Score=642.00  Aligned_cols=464  Identities=44%  Similarity=0.812  Sum_probs=405.9

Q ss_pred             hccCCCCCCCCCCCccccccccCCCCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCC-cc
Q 010727           21 RKHKKTFPPGPPGLPIIGNIHQYDTSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPN-LT   99 (502)
Q Consensus        21 ~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~-~~   99 (502)
                      .+.++++||||+++|++||++++....+|..+.++.++|||++.+++|..++|+|+|++.++|++.+++..|+.|+. ..
T Consensus        21 ~~~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~  100 (489)
T KOG0156|consen   21 YRKRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTA  100 (489)
T ss_pred             ccCCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence            34448899999999999999999433489999999999999999999999999999999999999999999999997 33


Q ss_pred             cccccccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHH
Q 010727          100 GQKAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCNLI  179 (502)
Q Consensus       100 ~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i  179 (502)
                      ....+.+++.+++++.+|+.|+.+||.++..+++.+.++++...-.++++.+++.+.+ ...+++||+...+..++.++|
T Consensus       101 ~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI  179 (489)
T KOG0156|consen  101 TLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVI  179 (489)
T ss_pred             hHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHH
Confidence            4466676778899999999999999999999999999999877779999999999987 323379999999999999999


Q ss_pred             HHHHhcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccc-cccccccchhhhHHHHHHHHhHHHHHHHHHHhh
Q 010727          180 CRIAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFP-FMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEH  258 (502)
Q Consensus       180 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  258 (502)
                      ++++||.++...+     .+...++..++......++.....+.+| ++++++...+..++.......+..++++.|+++
T Consensus       180 ~~~~fG~rf~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh  254 (489)
T KOG0156|consen  180 CRMLFGRRFEEED-----EEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEH  254 (489)
T ss_pred             HHHHhCCccccCC-----chHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998632     1234558888888888888888889999 677766444566777777777999999999999


Q ss_pred             cCCCCCCCCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHH
Q 010727          259 LDPNRPKVDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSV  338 (502)
Q Consensus       259 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~  338 (502)
                      .+.. .. .+. .|+++.|+...++++... ++++++...+..+++||+|||++|+.|++.+|++||++|+|+++||+++
T Consensus       255 ~~~~-~~-~~~-~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~v  330 (489)
T KOG0156|consen  255 REKI-GD-EEG-RDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEV  330 (489)
T ss_pred             Hhhh-cc-CCC-CcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            8765 22 222 799999998876543222 9999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCcccccCChhHHHHHHHhhccCCCCC-CCCccccccceecCeecCCCCEEEechhhhcCCCCCCCCCCCCCCC
Q 010727          339 AKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPE  417 (502)
Q Consensus       339 ~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~-~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~  417 (502)
                      +|.++.++.+|+.+||||+|||+|++|+||++| .++|.+++|+.++||.|||||.|+++.+++||||++|+||++|+||
T Consensus       331 vG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PE  410 (489)
T KOG0156|consen  331 VGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPE  410 (489)
T ss_pred             hCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChh
Confidence            999888999999999999999999999999999 7899999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccCceEEE
Q 010727          418 RFMGTDCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKIPLKLM  497 (502)
Q Consensus       418 R~l~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (502)
                      ||++++  +.+.....++|||.|+|.|||..||.+++..+++.|+++|||+++++    +++.... +++...+.++.+.
T Consensus       411 RFl~~~--d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~-~~~~~~~~pl~~~  483 (489)
T KOG0156|consen  411 RFLDSN--DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEA-GLTLKKKKPLKAV  483 (489)
T ss_pred             hhcCCc--cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCccc-ccceecCCcceee
Confidence            999973  33346789999999999999999999999999999999999999876    3344444 4667777788888


Q ss_pred             Eeec
Q 010727          498 ATKF  501 (502)
Q Consensus       498 ~~~r  501 (502)
                      ..+|
T Consensus       484 ~~~r  487 (489)
T KOG0156|consen  484 PVPR  487 (489)
T ss_pred             eecC
Confidence            8776


No 2  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=2.3e-83  Score=626.09  Aligned_cols=483  Identities=49%  Similarity=0.894  Sum_probs=391.0

Q ss_pred             HHHHHHHHHhccCCCCCCCCCCCccccccccCCCCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCc
Q 010727           12 LPISLLFLLRKHKKTFPPGPPGLPIIGNIHQYDTSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQ   91 (502)
Q Consensus        12 ~~~~~~~~~~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~   91 (502)
                      +++++++...+++.+.||||+++|++||+..+...+++.++.+++++||++|++++|+.++|+++||+++++++.++...
T Consensus        14 ~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~   93 (499)
T PLN03234         14 AAFFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLN   93 (499)
T ss_pred             HHHHHHHHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCcc
Confidence            33333344445556889999999999999888434688899999999999999999999999999999999999988778


Q ss_pred             ccCCCCcccccccccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHH
Q 010727           92 FSGRPNLTGQKAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSASASEPANLSEII  171 (502)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~  171 (502)
                      |..++.........+.+....+...++.|+++|+.+..++|++++++.+.+.+++.++++++.|.+..++++++|+.+.+
T Consensus        94 f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~  173 (499)
T PLN03234         94 FTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELL  173 (499)
T ss_pred             ccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHH
Confidence            88777544333333223344456678999999998667999999999999999999999999998665567789999999


Q ss_pred             HHHHHHHHHHHHhcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHHHhHHHHH
Q 010727          172 MSLLCNLICRIAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFY  251 (502)
Q Consensus       172 ~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~  251 (502)
                      ..+++|+++.++||.+++..+      .+...+.+.+...............+|++.++..+.+..++..++.+.+.+++
T Consensus       174 ~~~t~dvi~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~  247 (499)
T PLN03234        174 LSFTNCVVCRQAFGKRYNEYG------TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYL  247 (499)
T ss_pred             HHHHHHHHHHHHhCCcccccc------hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence            999999999999999886432      11344444444443333222334455665544333344567788888999999


Q ss_pred             HHHHHhhcCCCCCCCCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHH
Q 010727          252 QELVDEHLDPNRPKVDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKA  331 (502)
Q Consensus       252 ~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~l  331 (502)
                      .+.++++.+....+. . ..|+++.|++...+.+.+..++++++.+++.++++||+|||+++++|++++|++||++|+|+
T Consensus       248 ~~~i~~~~~~~~~~~-~-~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl  325 (499)
T PLN03234        248 QELLDETLDPNRPKQ-E-TESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKA  325 (499)
T ss_pred             HHHHHHHHhhcccCC-C-cccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHH
Confidence            999998765432221 1 26899999976543322235899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCcccccCChhHHHHHHHhhccCCCCCC-CCccccccceecCeecCCCCEEEechhhhcCCCCCC-C
Q 010727          332 QEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPL-IPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVW-D  409 (502)
Q Consensus       332 r~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~-~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~-~  409 (502)
                      |+|+++++++.+.++.+++.+|||++|||+|++|++|+++. ++|.+.+|++++||.|||||.|+++.+.+||||++| +
T Consensus       326 ~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~  405 (499)
T PLN03234        326 QDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGD  405 (499)
T ss_pred             HHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccC
Confidence            99999999877778999999999999999999999999995 589999999999999999999999999999999999 7


Q ss_pred             CCCCCCCCccCCCCCC-CcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccc
Q 010727          410 KPDEFIPERFMGTDCV-DFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAM  488 (502)
Q Consensus       410 ~p~~F~P~R~l~~~~~-~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  488 (502)
                      ||++||||||+++.+. ........++|||+|+|.|+|+++|+.|+++++++|+++|++++.++..++.+......|+..
T Consensus       406 ~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  485 (499)
T PLN03234        406 NPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAM  485 (499)
T ss_pred             ChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCccccccccc
Confidence            9999999999975321 122346689999999999999999999999999999999999998764334455556778888


Q ss_pred             cccCceEEEEeecC
Q 010727          489 HKKIPLKLMATKFI  502 (502)
Q Consensus       489 ~~~~~~~~~~~~r~  502 (502)
                      ++++.+.+.+++|+
T Consensus       486 ~~~~~~~~~~~~~~  499 (499)
T PLN03234        486 HKKEHLVLAPTKHI  499 (499)
T ss_pred             ccCCCeEEEeecCC
Confidence            88889999999885


No 3  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=8.2e-82  Score=615.29  Aligned_cols=472  Identities=38%  Similarity=0.732  Sum_probs=375.0

Q ss_pred             HHHHHhccCCCCCCCCCCCccccccccCCCCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCC
Q 010727           16 LLFLLRKHKKTFPPGPPGLPIIGNIHQYDTSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGR   95 (502)
Q Consensus        16 ~~~~~~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~   95 (502)
                      +++++.+++.++||||+++|++|+++.+ ....+.++.+|+++||++|++++++.++|+++||+++++++.++...|+.+
T Consensus        26 ~~~~~~~~~~~~ppgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r  104 (516)
T PLN02183         26 GLISRLRRRLPYPPGPKGLPIIGNMLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNR  104 (516)
T ss_pred             HHHhhccCCCCCCcCCCCCCeeccHHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCC
Confidence            3344555567889999999999999777 455677899999999999999999999999999999999999877777777


Q ss_pred             CCcccccccccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHH
Q 010727           96 PNLTGQKAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSASASEPANLSEIIMSLL  175 (502)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  175 (502)
                      +..........++.+++++.+|+.|+++|+.++.++|+.+.++.+.+. .++++.+++.|..  ..++++|+.+++..++
T Consensus       105 ~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~--~~~~~v~~~~~~~~~~  181 (516)
T PLN02183        105 PANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSS--NIGKPVNIGELIFTLT  181 (516)
T ss_pred             CcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHh--cCCCcEeHHHHHHHHH
Confidence            654332223222346678888999999999866899999999998885 5689999999965  2467899999999999


Q ss_pred             HHHHHHHHhcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHHHhHHHHHHHHH
Q 010727          176 CNLICRIAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELV  255 (502)
Q Consensus       176 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i  255 (502)
                      .|+++.++||.+++..         ...+.+.+......+........+|++.++.. ....++..+..+.+.+++.+.+
T Consensus       182 ~~vi~~~~fG~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i  251 (516)
T PLN02183        182 RNITYRAAFGSSSNEG---------QDEFIKILQEFSKLFGAFNVADFIPWLGWIDP-QGLNKRLVKARKSLDGFIDDII  251 (516)
T ss_pred             HHHHHhHhhcCcccch---------HHHHHHHHHHHHHHhCCccHHHhcchhHhccc-ccHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999876431         23455555554443333334456666554321 1234556667777888888777


Q ss_pred             HhhcCCCCCC-----CCCCcccHHHHHHHhhhcCc---------ccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Q 010727          256 DEHLDPNRPK-----VDQQQEDIIDVLLRIRKNSE---------TKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNL  321 (502)
Q Consensus       256 ~~~~~~~~~~-----~~~~~~d~l~~ll~~~~~~~---------~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L  321 (502)
                      +++.+....+     ......|+++.++++...+.         ....++++++.+++.++++||+|||+++++|++++|
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L  331 (516)
T PLN02183        252 DDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAEL  331 (516)
T ss_pred             HHHHHhhcccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHH
Confidence            7765322111     11122689999998543211         112589999999999999999999999999999999


Q ss_pred             HhCchHHHHHHHHHHHHhcCCCCCCcccccCChhHHHHHHHhhccCCCCCCCCccccccceecCeecCCCCEEEechhhh
Q 010727          322 MRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTAEECVVDGYKIEAKTLAYVNTLAI  401 (502)
Q Consensus       322 ~~~p~~q~~lr~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~  401 (502)
                      ++||++|+|+|+|++++++..+.++.+++.+||||+|||+||||++|+++...|++.+|++++||.|||||.|.++.+.+
T Consensus       332 a~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~  411 (516)
T PLN02183        332 MKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAI  411 (516)
T ss_pred             HhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhh
Confidence            99999999999999999986667899999999999999999999999999777999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCccCCCCCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCcc
Q 010727          402 GRDSEVWDKPDEFIPERFMGTDCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYD  481 (502)
Q Consensus       402 ~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~  481 (502)
                      ||||++|+||++|+||||++++..........++|||+|+|.|+|++||++|+++++|+|+++|++++.++....+.+..
T Consensus       412 hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~  491 (516)
T PLN02183        412 GRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMN  491 (516)
T ss_pred             cCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChh
Confidence            99999999999999999997532222234568999999999999999999999999999999999998776533334444


Q ss_pred             CCCCccccccCceEEEEeec
Q 010727          482 ILPGVAMHKKIPLKLMATKF  501 (502)
Q Consensus       482 ~~~~~~~~~~~~~~~~~~~r  501 (502)
                      ...+...+++.++.+.+++|
T Consensus       492 ~~~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        492 DVFGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             hccccccccCCCcEEEeecC
Confidence            44566556667888888887


No 4  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.9e-81  Score=579.58  Aligned_cols=460  Identities=24%  Similarity=0.370  Sum_probs=361.3

Q ss_pred             ccCCCCCCCCCCCccccccccCCC-CCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCC--CCc
Q 010727           22 KHKKTFPPGPPGLPIIGNIHQYDT-SNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGR--PNL   98 (502)
Q Consensus        22 ~~~~~~ppgP~~~p~~G~~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~--~~~   98 (502)
                      .++++-+|+|+++|++||+..+.. ..+..+..+...+||+++.++.+.+|.++|.||+++++|+.++.++|.++  +..
T Consensus        27 yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~  106 (499)
T KOG0158|consen   27 YWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIY  106 (499)
T ss_pred             hhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCc
Confidence            345668888888999999987742 22345555555556999999999999999999999999999999999884  333


Q ss_pred             ccccccccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHH
Q 010727           99 TGQKAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCNL  178 (502)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~  178 (502)
                      ..... . -....++...|+.|+++|.. ++|.|+..+++.+.+.+++.++++++.+.+....+..+++.+.+..++.|+
T Consensus       107 ~d~~~-~-l~~~~Lf~~~g~~WK~lR~~-lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DV  183 (499)
T KOG0158|consen  107 GDPED-P-LSALNLFFLRGERWKRLRTK-LSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDV  183 (499)
T ss_pred             CCCCC-c-ccccCchhccCchHHHHHHh-hccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHH
Confidence            32222 1 12356778889999999999 899999999999999999999999999988654445788999999999999


Q ss_pred             HHHHHhcccccCCCcchhccchhHHHHHHHHHHHhh-hcc----cccccccccccccccchhhhHHHHHHHHhHHHHHHH
Q 010727          179 ICRIAFSKRCEDDDGQAERVGNKTRFHHILAETQAM-AGS----FFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQE  253 (502)
Q Consensus       179 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (502)
                      |++++||.+.+...      +....+...-...... ...    ......+|.+....   ..........+.+.+.+.+
T Consensus       184 I~~~AfG~~~~s~~------d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l---~~~~~~~~~~~~~~~~v~~  254 (499)
T KOG0158|consen  184 IGSCAFGLDANSLR------DPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL---RVKLFPEDVTDFFRKLVNS  254 (499)
T ss_pred             HhHhhcccchhhhc------CchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh---hcccChHHHHHHHHHHHHH
Confidence            99999999988643      1233444322222222 111    11122223222110   0111223334455566666


Q ss_pred             HHHhhcCCCCCCCCCCcccHHHHHHHhhhc---Ccccc-cCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHH
Q 010727          254 LVDEHLDPNRPKVDQQQEDIIDVLLRIRKN---SETKI-DLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMK  329 (502)
Q Consensus       254 ~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~---~~~~~-~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~  329 (502)
                      .++.|.+.    ... .+|+++.+++.+.+   +.... .+|.+||+++++.+++||.||||++++.++|+||+|||+|+
T Consensus       255 ~v~~R~~~----~~~-r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~  329 (499)
T KOG0158|consen  255 RVEQREKE----NIE-RNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQD  329 (499)
T ss_pred             HHHHHHhc----CCC-CchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHH
Confidence            67766222    112 28999999998754   11112 59999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCcccccCChhHHHHHHHhhccCCCCCCCCccccccceec-CeecCCCCEEEechhhhcCCCCCC
Q 010727          330 KAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTAEECVVD-GYKIEAKTLAYVNTLAIGRDSEVW  408 (502)
Q Consensus       330 ~lr~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~-g~~ip~gt~v~~~~~~~~~d~~~~  408 (502)
                      |||+||++++.+...+|+|.+.+|+||++||+||||+||+++.+-|.|++|++++ ++.||||+.|.++.+++||||++|
T Consensus       330 kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~  409 (499)
T KOG0158|consen  330 KLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYW  409 (499)
T ss_pred             HHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccC
Confidence            9999999997765559999999999999999999999999998889999999999 999999999999999999999999


Q ss_pred             CCCCCCCCCccCCCCCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccc
Q 010727          409 DKPDEFIPERFMGTDCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAM  488 (502)
Q Consensus       409 ~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  488 (502)
                      |||++|+||||.+++..  ...+..|+|||.|||.|+|++||.+|+|++|++||++|+++.++..  .+.......+.++
T Consensus       410 p~Pe~F~PERF~~~~~~--~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t--~~~~~~~~~~~~l  485 (499)
T KOG0158|consen  410 PEPEKFKPERFEEENNK--SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTT--IIPLEGDPKGFTL  485 (499)
T ss_pred             CCcccCCCccCCCCccc--ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcc--cCcccCCccceee
Confidence            99999999999976322  4467899999999999999999999999999999999999998732  2322222336778


Q ss_pred             cccCceEEEEeecC
Q 010727          489 HKKIPLKLMATKFI  502 (502)
Q Consensus       489 ~~~~~~~~~~~~r~  502 (502)
                      .+++++++++++|+
T Consensus       486 ~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  486 SPKGGIWLKLEPRD  499 (499)
T ss_pred             ecCCceEEEEEeCC
Confidence            88889999999984


No 5  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=8.1e-81  Score=610.07  Aligned_cols=471  Identities=25%  Similarity=0.468  Sum_probs=365.4

Q ss_pred             CCCCCCCCCCccccccccCCCCC-CchHHHHHHHhhC-CcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCccccc
Q 010727           25 KTFPPGPPGLPIIGNIHQYDTSN-PPRYLWELSKKYG-PLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTGQK  102 (502)
Q Consensus        25 ~~~ppgP~~~p~~G~~~~~~~~~-~~~~~~~~~~kyG-~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~~~  102 (502)
                      .++||||+++|++||++.+..+. .+.++.++.++|| +++++++|+.++|+|+||+.+++++.++...|+.++......
T Consensus        56 ~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~~  135 (543)
T PLN02971         56 HPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQK  135 (543)
T ss_pred             CCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccchh
Confidence            46899999999999998773322 3677899999999 899999999999999999999999998888888887544333


Q ss_pred             ccccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHHHHH
Q 010727          103 AFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCNLICRI  182 (502)
Q Consensus       103 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~  182 (502)
                      .+..+..+++++.+|+.|+++||.+..+++++..++.+.+.++++++.+.+.+.+...+++++|+.+.+..+++++++++
T Consensus       136 ~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~  215 (543)
T PLN02971        136 ILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKRL  215 (543)
T ss_pred             hccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHHH
Confidence            33322234678888999999999965677777777788889999999998888765445678999999999999999999


Q ss_pred             HhcccccCCCcchhccchhHHHHHHHHHHHhhhc---ccccccccccccccccchhhhHHHHHHHHhHHHHHHHHHHhhc
Q 010727          183 AFSKRCEDDDGQAERVGNKTRFHHILAETQAMAG---SFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEHL  259 (502)
Q Consensus       183 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  259 (502)
                      +||.++...+.... .+........+........   .....+.+|++++++ ..+..+...+..+.+.+++.+.++++.
T Consensus       216 ~fG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~  293 (543)
T PLN02971        216 MFGTRTFSEKTEPD-GGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLD-LNGHEKIMRESSAIMDKYHDPIIDERI  293 (543)
T ss_pred             HhCCcccccccccc-cchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhc-ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99998742110000 0001122222333222111   112335566655442 112334455566677888888888776


Q ss_pred             CCCCCCCCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHHh
Q 010727          260 DPNRPKVDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVA  339 (502)
Q Consensus       260 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~  339 (502)
                      +..+.+......|+++.|++...+++ ...++++++.+++.++++||+|||+++++|++++|+.||++|+|+|+||++++
T Consensus       294 ~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~  372 (543)
T PLN02971        294 KMWREGKRTQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVV  372 (543)
T ss_pred             HHHhccCCCCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence            43221111112699999998654322 12499999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCcccccCChhHHHHHHHhhccCCCCC-CCCccccccceecCeecCCCCEEEechhhhcCCCCCCCCCCCCCCCc
Q 010727          340 KNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPER  418 (502)
Q Consensus       340 ~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~-~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R  418 (502)
                      +.++.++.+++.+|||++|||+|+||++|+++ .++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+|||
T Consensus       373 g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeR  452 (543)
T PLN02971        373 GKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPER  452 (543)
T ss_pred             CCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCccc
Confidence            98788999999999999999999999999999 58999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCC-CcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccCceEEE
Q 010727          419 FMGTDCV-DFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKIPLKLM  497 (502)
Q Consensus       419 ~l~~~~~-~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (502)
                      |++++.. .....+..++|||+|+|.|+|++||+.|+++++++|+++|++++.++..  +++....++ ..-.+.++.+.
T Consensus       453 fl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~  529 (543)
T PLN02971        453 HLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSET--RVELMESSH-DMFLSKPLVMV  529 (543)
T ss_pred             CCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCC--CcchhhhcC-cccccccceee
Confidence            9975221 1112456799999999999999999999999999999999999876542  445555556 44344588999


Q ss_pred             Eeec
Q 010727          498 ATKF  501 (502)
Q Consensus       498 ~~~r  501 (502)
                      +++|
T Consensus       530 ~~~~  533 (543)
T PLN02971        530 GELR  533 (543)
T ss_pred             eeec
Confidence            8887


No 6  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.4e-80  Score=605.15  Aligned_cols=470  Identities=44%  Similarity=0.822  Sum_probs=367.6

Q ss_pred             hccCCCCCCCCCCCccccccccCCCCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCccc
Q 010727           21 RKHKKTFPPGPPGLPIIGNIHQYDTSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTG  100 (502)
Q Consensus        21 ~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~  100 (502)
                      .+++.+.||||+++|++||++.+...+++.++.+|+++||++|++++++.++|+++||+.+++++.++...|.+++....
T Consensus        24 ~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~  103 (502)
T PLN02966         24 KTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRG  103 (502)
T ss_pred             ccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcc
Confidence            34456789999999999999887445688899999999999999999999999999999999999877766765554332


Q ss_pred             ccccccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHHH
Q 010727          101 QKAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCNLIC  180 (502)
Q Consensus       101 ~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~  180 (502)
                      ......+.....++.+|+.|+++|+.+++++|++++++.+.+.+.++++++++.|.+....++++|+.+++..+++|+++
T Consensus       104 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~  183 (502)
T PLN02966        104 HEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVC  183 (502)
T ss_pred             ceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHH
Confidence            22222223334466679999999998778999999999999999999999999998765556789999999999999999


Q ss_pred             HHHhcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHHHhHHHHHHHHHHhhcC
Q 010727          181 RIAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEHLD  260 (502)
Q Consensus       181 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  260 (502)
                      .++||.+++..+      .+...+.+.+...........+...+|++.++..+.+..+......+...+++.+.++++.+
T Consensus       184 ~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  257 (502)
T PLN02966        184 RQAFGKKYNEDG------EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLD  257 (502)
T ss_pred             HHHhCCccCccc------hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999886432      11233444444443333333334455543332212222233344455566667777766543


Q ss_pred             CCCCCCCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHHhc
Q 010727          261 PNRPKVDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAK  340 (502)
Q Consensus       261 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~  340 (502)
                      .......  ..|+++.+++..++......++++++.++++++++||+|||+++++|++++|++||++|+|+|+|++++++
T Consensus       258 ~~~~~~~--~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~  335 (502)
T PLN02966        258 PKRVKPE--TESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMK  335 (502)
T ss_pred             ccccccc--cccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc
Confidence            2111111  16899999986544321235899999999999999999999999999999999999999999999999987


Q ss_pred             CC--CCCCcccccCChhHHHHHHHhhccCCCCCC-CCccccccceecCeecCCCCEEEechhhhcCCCCCC-CCCCCCCC
Q 010727          341 NK--GFVDEDDLETLQYLKAVLKETFRLQPPVPL-IPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVW-DKPDEFIP  416 (502)
Q Consensus       341 ~~--~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~-~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~-~~p~~F~P  416 (502)
                      ..  ..++.+|+++||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+.+||||++| |||++|+|
T Consensus       336 ~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~P  415 (502)
T PLN02966        336 EKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRP  415 (502)
T ss_pred             ccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCCh
Confidence            53  357999999999999999999999999994 689999999999999999999999999999999999 99999999


Q ss_pred             CccCCCCCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccCceEE
Q 010727          417 ERFMGTDCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKIPLKL  496 (502)
Q Consensus       417 ~R~l~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (502)
                      |||++++. +....+..++|||+|+|.|+|++||++|+++++++|+++|+|++.++.+.+.++.+...|+...++.++. 
T Consensus       416 eRwl~~~~-~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  493 (502)
T PLN02966        416 ERFLEKEV-DFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLK-  493 (502)
T ss_pred             hhhcCCCC-CcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeE-
Confidence            99997522 2223456899999999999999999999999999999999999987754445555556676665554554 


Q ss_pred             EEeec
Q 010727          497 MATKF  501 (502)
Q Consensus       497 ~~~~r  501 (502)
                       +++|
T Consensus       494 -~~~~  497 (502)
T PLN02966        494 -LVPE  497 (502)
T ss_pred             -EEEE
Confidence             5544


No 7  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=2.8e-80  Score=604.69  Aligned_cols=468  Identities=36%  Similarity=0.711  Sum_probs=377.7

Q ss_pred             CCCCCCCCCccccccccCCCCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCcccccccc
Q 010727           26 TFPPGPPGLPIIGNIHQYDTSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTGQKAFS  105 (502)
Q Consensus        26 ~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~~~~~~  105 (502)
                      +.||||.++|++||++.+ ..+++.++.+|+++||++|++++|+.++|+++||+++++++.++...|+.++.......+.
T Consensus        34 ~~pPgp~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~  112 (517)
T PLN02687         34 PLPPGPRGWPVLGNLPQL-GPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMA  112 (517)
T ss_pred             CCCccCCCCCccccHHhc-CCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhc
Confidence            479999999999999888 5678899999999999999999999999999999999999998777788776544333333


Q ss_pred             cCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHHHHHHhc
Q 010727          106 YKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCNLICRIAFS  185 (502)
Q Consensus       106 ~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG  185 (502)
                      ..+.+++++.+|+.|+++||.+..++|+.++++.+.+.++++++++++.|.+.. +++++|+.+++..+++|+++.++||
T Consensus       113 ~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~~~vd~~~~~~~~t~dvi~~~~fG  191 (517)
T PLN02687        113 YNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH-GTAPVNLGQLVNVCTTNALGRAMVG  191 (517)
T ss_pred             cCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHHHHhC
Confidence            334567788889999999999434899999999999999999999999997643 4568999999999999999999999


Q ss_pred             ccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHHHhHHHHHHHHHHhhcCCCCCC
Q 010727          186 KRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEHLDPNRPK  265 (502)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  265 (502)
                      .++...+..    .....+.+.+...............+|++.++.. ....++..+..+.+.+++.+.++++.+..+.+
T Consensus       192 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~  266 (517)
T PLN02687        192 RRVFAGDGD----EKAREFKEMVVELMQLAGVFNVGDFVPALRWLDL-QGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTG  266 (517)
T ss_pred             ccccccCCc----chHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            987542210    1234455555554443332222345565544321 12234566667788888999999887654321


Q ss_pred             CCCCcccHHHHHHHhhhcC---cccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCC
Q 010727          266 VDQQQEDIIDVLLRIRKNS---ETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNK  342 (502)
Q Consensus       266 ~~~~~~d~l~~ll~~~~~~---~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~  342 (502)
                      ... ..|+++.+++...+.   +.+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++..
T Consensus       267 ~~~-~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~  345 (517)
T PLN02687        267 SEE-HKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRD  345 (517)
T ss_pred             Ccc-cccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC
Confidence            112 279999999865432   1123599999999999999999999999999999999999999999999999999877


Q ss_pred             CCCCcccccCChhHHHHHHHhhccCCCCC-CCCccccccceecCeecCCCCEEEechhhhcCCCCCCCCCCCCCCCccCC
Q 010727          343 GFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFMG  421 (502)
Q Consensus       343 ~~~~~~~~~~lp~l~a~i~E~lRl~~~~~-~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~  421 (502)
                      +.++.+++.+||||+|||+||+|++|+++ .++|++.+|++++||.|||||.|.++.+.+||||++|+||++|+||||++
T Consensus       346 ~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~  425 (517)
T PLN02687        346 RLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLP  425 (517)
T ss_pred             CCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCC
Confidence            77999999999999999999999999999 58999999999999999999999999999999999999999999999997


Q ss_pred             CCCCC---cCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccCceEEEE
Q 010727          422 TDCVD---FQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKIPLKLMA  498 (502)
Q Consensus       422 ~~~~~---~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (502)
                      .+...   ....+..++|||+|+|.|+|++||++|+++++++|+++|++++.++...+++......++...++.++++++
T Consensus       426 ~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (517)
T PLN02687        426 GGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHP  505 (517)
T ss_pred             CCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEee
Confidence            52211   112456899999999999999999999999999999999999977643233434445566666777899999


Q ss_pred             eec
Q 010727          499 TKF  501 (502)
Q Consensus       499 ~~r  501 (502)
                      ++|
T Consensus       506 ~~R  508 (517)
T PLN02687        506 RPR  508 (517)
T ss_pred             ccC
Confidence            888


No 8  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=6.6e-80  Score=598.10  Aligned_cols=467  Identities=34%  Similarity=0.691  Sum_probs=377.9

Q ss_pred             ccCCCCCCCCCCCccccccccCCCCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCcccc
Q 010727           22 KHKKTFPPGPPGLPIIGNIHQYDTSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTGQ  101 (502)
Q Consensus        22 ~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~~  101 (502)
                      +.+.++||||+++|++||++.+ ..+++.++.+++++||+++++++|+.++|+++||+++++++.++...|+.++.....
T Consensus        27 ~~~~~~pPgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~  105 (504)
T PLN00110         27 KPSRKLPPGPRGWPLLGALPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGA  105 (504)
T ss_pred             cccCCCcccCCCCCeeechhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccch
Confidence            4457889999999999998877 556789999999999999999999999999999999999999877788877754332


Q ss_pred             cccccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHHHH
Q 010727          102 KAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCNLICR  181 (502)
Q Consensus       102 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~  181 (502)
                      .....+..+++++.+|+.|+++|+.+..+.|++++++.+.+.+.++++.+++.+.+...+++++|+.+++..+++|+|+.
T Consensus       106 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~  185 (504)
T PLN00110        106 THLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQ  185 (504)
T ss_pred             hhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHH
Confidence            22223344677888899999999995446899999999999999999999999977555677899999999999999999


Q ss_pred             HHhcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHHHhHHHHHHHHHHhhcCC
Q 010727          182 IAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEHLDP  261 (502)
Q Consensus       182 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  261 (502)
                      ++||.++....+     .+...+...+...............+|++.++.. .+..+...+..+.+.+++.+.++++.+.
T Consensus       186 ~~fg~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~  259 (504)
T PLN00110        186 VILSRRVFETKG-----SESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDI-QGIERGMKHLHKKFDKLLTRMIEEHTAS  259 (504)
T ss_pred             HHhCCcccccCc-----hhHHHHHHHHHHHHHHhccccHHHHcchHhhhCc-chHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999998732110     1234566666555443333333355666554321 1233555666777888888888877654


Q ss_pred             CCCCCCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcC
Q 010727          262 NRPKVDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKN  341 (502)
Q Consensus       262 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~  341 (502)
                      .+....  ..|+++.+++...... +..++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++++++.
T Consensus       260 ~~~~~~--~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  336 (504)
T PLN00110        260 AHERKG--NPDFLDVVMANQENST-GEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGR  336 (504)
T ss_pred             cccccc--CCChhhHHhhcccccC-CCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence            322111  2689999997543221 2369999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCcccccCChhHHHHHHHhhccCCCCC-CCCccccccceecCeecCCCCEEEechhhhcCCCCCCCCCCCCCCCccC
Q 010727          342 KGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFM  420 (502)
Q Consensus       342 ~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~-~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l  420 (502)
                      .+.++.+++++||||+|||+||+|++|+++ .++|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+||||+
T Consensus       337 ~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl  416 (504)
T PLN00110        337 NRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFL  416 (504)
T ss_pred             CCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCccccc
Confidence            777999999999999999999999999999 4899999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcC--CccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccCceEEEE
Q 010727          421 GTDCVDFQ--GQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKIPLKLMA  498 (502)
Q Consensus       421 ~~~~~~~~--~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (502)
                      +.+.....  .....++|||+|+|.|+|++||+.|+++++++|+++||+++.++.   ++......+++++++.++++++
T Consensus       417 ~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  493 (504)
T PLN00110        417 SEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV---ELNMDEAFGLALQKAVPLSAMV  493 (504)
T ss_pred             CCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC---ccCcccccccccccCCCceEee
Confidence            65221111  123579999999999999999999999999999999999987653   3333345677788888999999


Q ss_pred             eec
Q 010727          499 TKF  501 (502)
Q Consensus       499 ~~r  501 (502)
                      ++|
T Consensus       494 ~~r  496 (504)
T PLN00110        494 TPR  496 (504)
T ss_pred             ccC
Confidence            988


No 9  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=3.7e-79  Score=598.20  Aligned_cols=472  Identities=34%  Similarity=0.654  Sum_probs=377.5

Q ss_pred             CCCCCCCCCCccccccccCCCCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCccccccc
Q 010727           25 KTFPPGPPGLPIIGNIHQYDTSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTGQKAF  104 (502)
Q Consensus        25 ~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~~~~~  104 (502)
                      .+.||||+++|++||++.+ ..+++.++.++++|||+++++++++.++|+++||+++++++.++...|+.++........
T Consensus        31 ~~~ppgp~~~pl~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~  109 (514)
T PLN03112         31 LRLPPGPPRWPIVGNLLQL-GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHL  109 (514)
T ss_pred             CCCccCCCCCCeeeeHHhc-CCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccceee
Confidence            4679999999999999888 567889999999999999999999999999999999999998887788877654332222


Q ss_pred             ccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHHHHHHh
Q 010727          105 SYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCNLICRIAF  184 (502)
Q Consensus       105 ~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~f  184 (502)
                      .++...++++.+|+.|+++|+.+.+++|+.++++.+.+.+.++++.+++.+.+...+++++|+.+.+..+++++++.++|
T Consensus       110 ~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~f  189 (514)
T PLN03112        110 AYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRMLL  189 (514)
T ss_pred             ccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHHHHHc
Confidence            23334556778899999999996678999999999999999999999998766444567899999999999999999999


Q ss_pred             cccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHHHhHHHHHHHHHHhhcCCCCC
Q 010727          185 SKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEHLDPNRP  264 (502)
Q Consensus       185 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  264 (502)
                      |.++......  ...+...+...+...............+|++.++.. .+..++..+..+.+.+++.+.++++.+..+.
T Consensus       190 G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  266 (514)
T PLN03112        190 GKQYFGAESA--GPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDP-YGCEKKMREVEKRVDEFHDKIIDEHRRARSG  266 (514)
T ss_pred             CCcccccccc--chHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            9987432110  001234455555554433322233345565554422 1234556667777888888888876653322


Q ss_pred             CC-CCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCC
Q 010727          265 KV-DQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKG  343 (502)
Q Consensus       265 ~~-~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~  343 (502)
                      .. .....|+++.++++..+++ ...++++++.+++.++++||+|||+++++|++++|++||++|+|+|+|++++++.++
T Consensus       267 ~~~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~  345 (514)
T PLN03112        267 KLPGGKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNR  345 (514)
T ss_pred             cccCCccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCC
Confidence            11 1122689999998654322 225899999999999999999999999999999999999999999999999998877


Q ss_pred             CCCcccccCChhHHHHHHHhhccCCCCC-CCCccccccceecCeecCCCCEEEechhhhcCCCCCCCCCCCCCCCccCCC
Q 010727          344 FVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFMGT  422 (502)
Q Consensus       344 ~~~~~~~~~lp~l~a~i~E~lRl~~~~~-~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  422 (502)
                      .++.+++++|||++|||+||+|++|+++ .++|.+.+|++++||.|||||.|.++.+.+||||++|+||++||||||...
T Consensus       346 ~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~  425 (514)
T PLN03112        346 MVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPA  425 (514)
T ss_pred             cCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCC
Confidence            8999999999999999999999999999 578999999999999999999999999999999999999999999998753


Q ss_pred             CCCCc---CCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccCceEEEEe
Q 010727          423 DCVDF---QGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKIPLKLMAT  499 (502)
Q Consensus       423 ~~~~~---~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (502)
                      .....   ......++|||+|+|.|+|++||++|+++++++|+++||+++.++...+++......++..++++++.+.++
T Consensus       426 ~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (514)
T PLN03112        426 EGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVAT  505 (514)
T ss_pred             CCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEee
Confidence            21111   123467999999999999999999999999999999999998765433344454556777778889999999


Q ss_pred             ec
Q 010727          500 KF  501 (502)
Q Consensus       500 ~r  501 (502)
                      +|
T Consensus       506 ~r  507 (514)
T PLN03112        506 PR  507 (514)
T ss_pred             cC
Confidence            98


No 10 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=4e-78  Score=586.64  Aligned_cols=457  Identities=27%  Similarity=0.426  Sum_probs=358.2

Q ss_pred             hccCCCCCCCCCCCccccccccCCCCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCccc
Q 010727           21 RKHKKTFPPGPPGLPIIGNIHQYDTSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTG  100 (502)
Q Consensus        21 ~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~  100 (502)
                      .+.+.+.+|||+++|++||++.+ ..+++..+.+++++||++|++++++.++|+++||+++++++.++...|..++....
T Consensus        24 ~~~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~  102 (482)
T PTZ00404         24 KKIHKNELKGPIPIPILGNLHQL-GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPS  102 (482)
T ss_pred             hhccCCCCCCCCCCCeeccHhhh-cccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcce
Confidence            34456779999999999999888 55788999999999999999999999999999999999999877666766654433


Q ss_pred             ccccccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHHH
Q 010727          101 QKAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCNLIC  180 (502)
Q Consensus       101 ~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~  180 (502)
                      .....+  ...+++.+|+.|+++|+. +.+.|+..+++.+.+.+.+.++.+++.|.+..+.++.+|+.+++..+++|+++
T Consensus       103 ~~~~~~--~~~l~~~~g~~w~~~Rk~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~  179 (482)
T PTZ00404        103 IKHGTF--YHGIVTSSGEYWKRNREI-VGKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMF  179 (482)
T ss_pred             eeeecc--CCceeccChHHHHHHHHH-HHHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHH
Confidence            221111  234667789999999999 78999999999999999999999999997655456779999999999999999


Q ss_pred             HHHhcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHHHhHHHHHHHHHHhhcC
Q 010727          181 RIAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEHLD  260 (502)
Q Consensus       181 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  260 (502)
                      .++||.+++..+..  ..+....+...+...............++++....  ........+..+.+.+++.+.++++.+
T Consensus       180 ~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~  255 (482)
T PTZ00404        180 KYIFNEDISFDEDI--HNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY--YQYLEHTDKNFKKIKKFIKEKYHEHLK  255 (482)
T ss_pred             HHHhcccccccccc--chhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999987642210  00112344454444433322211112222222110  011122344566777777777776654


Q ss_pred             CCCCCCCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHHhc
Q 010727          261 PNRPKVDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAK  340 (502)
Q Consensus       261 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~  340 (502)
                      ..+.  .. ..|+++.|+++..+..   ....+++++++..+++||+|||+++++|++++|++||++|+||++|++++++
T Consensus       256 ~~~~--~~-~~dll~~ll~~~~~~~---~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~  329 (482)
T PTZ00404        256 TIDP--EV-PRDLLDLLIKEYGTNT---DDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVN  329 (482)
T ss_pred             ccCC--CC-cccHHHHHHHHhccCC---cccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhc
Confidence            3221  11 2789999998643211   2233458899999999999999999999999999999999999999999998


Q ss_pred             CCCCCCcccccCChhHHHHHHHhhccCCCCC-CCCcccccccee-cCeecCCCCEEEechhhhcCCCCCCCCCCCCCCCc
Q 010727          341 NKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTAEECVV-DGYKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPER  418 (502)
Q Consensus       341 ~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~-~~~R~~~~~~~i-~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R  418 (502)
                      ....++.+++.+||||+|||+||||+||+++ .++|.+.+|+++ +||.|||||.|+++.+++||||++||||++|+|||
T Consensus       330 ~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeR  409 (482)
T PTZ00404        330 GRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSR  409 (482)
T ss_pred             CCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccc
Confidence            7677899999999999999999999999999 479999999999 99999999999999999999999999999999999


Q ss_pred             cCCCCCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccCceEEEE
Q 010727          419 FMGTDCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKIPLKLMA  498 (502)
Q Consensus       419 ~l~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (502)
                      |++..      .+..++|||.|+|.|+|++||++|+++++++|+++|++++.++.   +.......+++.. +.+++|.+
T Consensus       410 wl~~~------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~-~~~~~v~~  479 (482)
T PTZ00404        410 FLNPD------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGK---KIDETEEYGLTLK-PNKFKVLL  479 (482)
T ss_pred             cCCCC------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCC---CCCcccccceeec-CCCceeee
Confidence            98641      34689999999999999999999999999999999999986653   2222234455555 45799999


Q ss_pred             eec
Q 010727          499 TKF  501 (502)
Q Consensus       499 ~~r  501 (502)
                      ++|
T Consensus       480 ~~R  482 (482)
T PTZ00404        480 EKR  482 (482)
T ss_pred             ecC
Confidence            887


No 11 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=5.6e-78  Score=588.74  Aligned_cols=467  Identities=24%  Similarity=0.461  Sum_probs=361.6

Q ss_pred             CCCCCCCCCCCccccccccCC--CCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCcccc
Q 010727           24 KKTFPPGPPGLPIIGNIHQYD--TSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTGQ  101 (502)
Q Consensus        24 ~~~~ppgP~~~p~~G~~~~~~--~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~~  101 (502)
                      ++++||||+++|++||++.+.  ..+++..+.+++++||++|++++|+.++|+++||+++++++.++...|+.++.....
T Consensus        33 ~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~  112 (519)
T PLN00168         33 GRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASS  112 (519)
T ss_pred             CCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccch
Confidence            357899999999999987652  234678899999999999999999999999999999999999888888777654332


Q ss_pred             cccccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHHHH
Q 010727          102 KAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCNLICR  181 (502)
Q Consensus       102 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~  181 (502)
                      ..+..+.....+..+|+.|+++||.+++++|+.++++.+.+.+.++++.+++.|.+....+.++|+.+.+..++.++++.
T Consensus       113 ~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~~  192 (519)
T PLN00168        113 RLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLVL  192 (519)
T ss_pred             hhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHH
Confidence            22221111222246799999999866899999999999999999999999999987544445789999999999999999


Q ss_pred             HHhcccccCCCcchhccchhHHHHHHHHHHHhhh-cccccccccccccccccchhhhHHHHHHHHhHHHHHHHHHHhhcC
Q 010727          182 IAFSKRCEDDDGQAERVGNKTRFHHILAETQAMA-GSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEHLD  260 (502)
Q Consensus       182 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  260 (502)
                      ++||.+++...        ...+........... ........+|.+.+... ....++..+..+.+.+++.+.++++.+
T Consensus       193 ~~fG~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~  263 (519)
T PLN00168        193 MCFGERLDEPA--------VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLF-RGRLQKALALRRRQKELFVPLIDARRE  263 (519)
T ss_pred             HHcCCCcChhh--------HHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhh-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999875311        222222222221111 11222344554332111 122344556677888888888887764


Q ss_pred             CCC---C-CC-C----CCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHH
Q 010727          261 PNR---P-KV-D----QQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKA  331 (502)
Q Consensus       261 ~~~---~-~~-~----~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~l  331 (502)
                      ...   . +. .    ....|+++.|++.......+..++++++.+++.++++||+|||+++++|++++|++||++|+|+
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl  343 (519)
T PLN00168        264 YKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKL  343 (519)
T ss_pred             HhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHH
Confidence            321   0 00 0    0126899999976532221236999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCC-CCCCcccccCChhHHHHHHHhhccCCCCC-CCCccccccceecCeecCCCCEEEechhhhcCCCCCCC
Q 010727          332 QEEVRSVAKNK-GFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWD  409 (502)
Q Consensus       332 r~Ei~~~~~~~-~~~~~~~~~~lp~l~a~i~E~lRl~~~~~-~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~  409 (502)
                      |+|++++++.. +.++.+++.+||||+|||+||+|++|+++ .++|.+.+|++++||.|||||.|+++.+.+||||++|+
T Consensus       344 ~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~  423 (519)
T PLN00168        344 HDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWE  423 (519)
T ss_pred             HHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccC
Confidence            99999999753 56899999999999999999999999998 56899999999999999999999999999999999999


Q ss_pred             CCCCCCCCccCCCCCCC----cCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCC
Q 010727          410 KPDEFIPERFMGTDCVD----FQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPG  485 (502)
Q Consensus       410 ~p~~F~P~R~l~~~~~~----~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  485 (502)
                      ||++|+||||+++....    ....+..++|||+|+|.|+|++||++|+++++++|+++|+|++.++..   ++.....+
T Consensus       424 ~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~  500 (519)
T PLN00168        424 RPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDE---VDFAEKRE  500 (519)
T ss_pred             CccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCc---CChhhhce
Confidence            99999999999742211    112345799999999999999999999999999999999999876532   22222334


Q ss_pred             ccccccCceEEEEeecC
Q 010727          486 VAMHKKIPLKLMATKFI  502 (502)
Q Consensus       486 ~~~~~~~~~~~~~~~r~  502 (502)
                      ....++.++++.+++|.
T Consensus       501 ~~~~~~~~~~~~~~~R~  517 (519)
T PLN00168        501 FTTVMAKPLRARLVPRR  517 (519)
T ss_pred             eEEeecCCcEEEEEecc
Confidence            45555668999998883


No 12 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1.9e-77  Score=585.02  Aligned_cols=473  Identities=29%  Similarity=0.514  Sum_probs=356.3

Q ss_pred             HHHHhccCCCCCCCCCCCccccccccCCCCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCC
Q 010727           17 LFLLRKHKKTFPPGPPGLPIIGNIHQYDTSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRP   96 (502)
Q Consensus        17 ~~~~~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~   96 (502)
                      .+.+..++.+.||||+++|++|+++.+.....+..+.+++++||++|++++++++.|+++||+.+++++.++...|..++
T Consensus        21 ~~~~~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~  100 (503)
T PLN02394         21 VSKLRGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRT  100 (503)
T ss_pred             HHHHhcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCC
Confidence            44455566788999999999999988733335688999999999999999999999999999999999987776777665


Q ss_pred             CcccccccccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhcc-CCCCccHHHHHHHHH
Q 010727           97 NLTGQKAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSAS-ASEPANLSEIIMSLL  175 (502)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~-~~~~vdl~~~~~~~~  175 (502)
                      .......+...+.+++++.+|+.|+++||.+..+.|++++++.+.+.++++++++++.|.+... .++.+|+.+.+..++
T Consensus       101 ~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~  180 (503)
T PLN02394        101 RNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMM  180 (503)
T ss_pred             CcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHH
Confidence            4333333332344667888899999999994459999999999999999999999999976432 234689999999999


Q ss_pred             HHHHHHHHhcccccCCCcchhccchhHHHHHHHHHHHhhhcc--cccccccccccccccchhhhHHHHHHHHhHHH-HHH
Q 010727          176 CNLICRIAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGS--FFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDK-FYQ  252 (502)
Q Consensus       176 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~-~~~  252 (502)
                      +|+++.++||.+++..++.     ....+.............  ......+|++.+.  +....+..........+ +..
T Consensus       181 ~dvi~~~~fG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  253 (503)
T PLN02394        181 YNIMYRMMFDRRFESEDDP-----LFLKLKALNGERSRLAQSFEYNYGDFIPILRPF--LRGYLKICQDVKERRLALFKD  253 (503)
T ss_pred             HHHHHHHHhCCCcccccch-----hHHHHHHHHHHHHHHhcccccchhhhchHHHHH--hhHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998653210     111121222211111111  1112333433221  11111222222222222 223


Q ss_pred             HHHHhhcCCCCC--CCCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHH
Q 010727          253 ELVDEHLDPNRP--KVDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKK  330 (502)
Q Consensus       253 ~~i~~~~~~~~~--~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~  330 (502)
                      ..++++.+..+.  .......|+++.|+++..++    .++++++..++..+++||+|||+++++|++|+|++||++|+|
T Consensus       254 ~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~----~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~k  329 (503)
T PLN02394        254 YFVDERKKLMSAKGMDKEGLKCAIDHILEAQKKG----EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKK  329 (503)
T ss_pred             HHHHHHHHHhhhccCCcchhhhHHHHHHhccccC----CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHH
Confidence            345555432111  01112268999999875432    489999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCcccccCChhHHHHHHHhhccCCCCC-CCCccccccceecCeecCCCCEEEechhhhcCCCCCCC
Q 010727          331 AQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWD  409 (502)
Q Consensus       331 lr~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~-~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~  409 (502)
                      ||+||+++.+.++.++.+++++||||+|||+||+|++|+++ ..+|.+.+|++++||.|||||.|.++.+.+||||++|+
T Consensus       330 l~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~  409 (503)
T PLN02394        330 LRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWK  409 (503)
T ss_pred             HHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCC
Confidence            99999999987667899999999999999999999999999 56899999999999999999999999999999999999


Q ss_pred             CCCCCCCCccCCCCCC-CcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCC-cc
Q 010727          410 KPDEFIPERFMGTDCV-DFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPG-VA  487 (502)
Q Consensus       410 ~p~~F~P~R~l~~~~~-~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~-~~  487 (502)
                      ||++|+||||++.++. ........++|||.|+|.|+|++||++|+++++++|+++|++++.++.+  .++.....| ..
T Consensus       410 ~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~  487 (503)
T PLN02394        410 NPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS--KIDVSEKGGQFS  487 (503)
T ss_pred             CccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC--cCccccccCcee
Confidence            9999999999975321 1122356799999999999999999999999999999999999877642  233333343 44


Q ss_pred             ccccCceEEEEeecC
Q 010727          488 MHKKIPLKLMATKFI  502 (502)
Q Consensus       488 ~~~~~~~~~~~~~r~  502 (502)
                      ...+.++.+++.+|+
T Consensus       488 ~~~~~~~~~~~~~r~  502 (503)
T PLN02394        488 LHIAKHSTVVFKPRS  502 (503)
T ss_pred             eccCCCceEEeecCC
Confidence            434558999999884


No 13 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=3.9e-77  Score=584.14  Aligned_cols=454  Identities=22%  Similarity=0.372  Sum_probs=354.3

Q ss_pred             CCCCCCCCCCCccccccccCCC------------------CCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHH
Q 010727           24 KKTFPPGPPGLPIIGNIHQYDT------------------SNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVM   85 (502)
Q Consensus        24 ~~~~ppgP~~~p~~G~~~~~~~------------------~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~   85 (502)
                      +++.||||+++|++||++.+..                  .+....+.+|+++||++|++++|+.++|+++||+++++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            3567999999999999877621                  1233356889999999999999999999999999999999


Q ss_pred             HhCCCcccCCCCcccccccccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhccCC-CC
Q 010727           86 RTNDLQFSGRPNLTGQKAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSASAS-EP  164 (502)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~  164 (502)
                      .++. .+..++...........+ ..+++.+|+.|+++||. +.+.|+.++++.+.+.+.++++++++.|.+....+ .+
T Consensus       120 ~~~~-~~~~r~~~~~~~~~~~~g-~~l~~~~g~~Wk~~Rk~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~  196 (516)
T PLN02290        120 TKYN-TVTGKSWLQQQGTKHFIG-RGLLMANGADWYHQRHI-AAPAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTE  196 (516)
T ss_pred             hcCC-CCCCCcchhhhHHHHHhc-CCccccCchHHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence            8663 344444221111111112 34566779999999999 78999999999999999999999999997654333 57


Q ss_pred             ccHHHHHHHHHHHHHHHHHhcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHH
Q 010727          165 ANLSEIIMSLLCNLICRIAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAF  244 (502)
Q Consensus       165 vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~  244 (502)
                      +|+.+++..+++|++++++||.+++..          +.+...+...............+|++.+++.  +..+..++..
T Consensus       197 vd~~~~~~~~~~~vi~~~~fG~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~--~~~~~~~~~~  264 (516)
T PLN02290        197 VEIGEYMTRLTADIISRTEFDSSYEKG----------KQIFHLLTVLQRLCAQATRHLCFPGSRFFPS--KYNREIKSLK  264 (516)
T ss_pred             EEhHHHHHHHHHHHHHHHHcCCccccc----------hHHHHHHHHHHHHHHHhhhhhcCchhhhCCC--hhHHHHHHHH
Confidence            999999999999999999999987531          1222232222222111111123444433321  2344566667


Q ss_pred             HhHHHHHHHHHHhhcCCCCCCC-CCCcccHHHHHHHhhhcC-cccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Q 010727          245 EDSDKFYQELVDEHLDPNRPKV-DQQQEDIIDVLLRIRKNS-ETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLM  322 (502)
Q Consensus       245 ~~~~~~~~~~i~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~  322 (502)
                      +.+.+++.+.++++.+..+.+. .....|+++.+++...+. +.+..++++++.+++.++++||+|||+++++|++++|+
T Consensus       265 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~  344 (516)
T PLN02290        265 GEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLA  344 (516)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence            7888888888888765432211 111278999999764322 11234889999999999999999999999999999999


Q ss_pred             hCchHHHHHHHHHHHHhcCCCCCCcccccCChhHHHHHHHhhccCCCCCCCCccccccceecCeecCCCCEEEechhhhc
Q 010727          323 RNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTAEECVVDGYKIEAKTLAYVNTLAIG  402 (502)
Q Consensus       323 ~~p~~q~~lr~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~  402 (502)
                      +||++|+|+|+|++++++.+ .++.+++++||||+|||+||+|++|+++.++|.+.+|++++||.|||||.|+++.+++|
T Consensus       345 ~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~  423 (516)
T PLN02290        345 SNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIH  423 (516)
T ss_pred             cCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhc
Confidence            99999999999999999865 78999999999999999999999999998899999999999999999999999999999


Q ss_pred             CCCCCC-CCCCCCCCCccCCCCCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCcc
Q 010727          403 RDSEVW-DKPDEFIPERFMGTDCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYD  481 (502)
Q Consensus       403 ~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~  481 (502)
                      |||++| +||++||||||++.+    ......++|||.|+|.|+|++||++|+++++++|+++|++++.++.+     ..
T Consensus       424 rdp~~~~~dP~~F~PeRfl~~~----~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~-----~~  494 (516)
T PLN02290        424 HSEELWGKDANEFNPDRFAGRP----FAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR-----HA  494 (516)
T ss_pred             CChhhhCCChhhcCccccCCCC----CCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc-----cC
Confidence            999999 799999999999541    11235799999999999999999999999999999999999876531     11


Q ss_pred             CCCCccccccCceEEEEeecC
Q 010727          482 ILPGVAMHKKIPLKLMATKFI  502 (502)
Q Consensus       482 ~~~~~~~~~~~~~~~~~~~r~  502 (502)
                      ...+++..|+.+++|++++|.
T Consensus       495 ~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        495 PVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             ccceeeecCCCCCeEEEEeCC
Confidence            223567788889999999883


No 14 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=2.9e-76  Score=569.49  Aligned_cols=459  Identities=25%  Similarity=0.457  Sum_probs=361.2

Q ss_pred             CCCCCCCccccccccCCCCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCcccccccccC
Q 010727           28 PPGPPGLPIIGNIHQYDTSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTGQKAFSYK  107 (502)
Q Consensus        28 ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~  107 (502)
                      ||||+++|++||++++...+++.++.+|+++||++|++++++.++|+|+||+++++++.++...|+.++.......+..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999998885456889999999999999999999999999999999999999888888777644333322221


Q ss_pred             ccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhcc--CCCCccHHHHHHHHHHHHHHHHHhc
Q 010727          108 HIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSAS--ASEPANLSEIIMSLLCNLICRIAFS  185 (502)
Q Consensus       108 ~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~~~~~i~~~~fG  185 (502)
                      +..+....+|+.|+++||.+..++++...++.+.+.+++.++.+++.+.+...  .++++|+.+.+..+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            22233445699999999986788899888899999999999999998876533  3568999999999999999999999


Q ss_pred             ccccCCCcchhc--cchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHHHhHHHHHHHHHHhhcCCCC
Q 010727          186 KRCEDDDGQAER--VGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEHLDPNR  263 (502)
Q Consensus       186 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  263 (502)
                      .+++..+.....  ......+...+...........+...+|++++++. ....+...+....+.+++.+.++++.+...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  239 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPN-KSFETRVQTTEFRRTAVMKALIKQQKKRIA  239 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            987653211000  00012233333333333322233456676665532 112233333334455777788777665432


Q ss_pred             CCCCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCC
Q 010727          264 PKVDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKG  343 (502)
Q Consensus       264 ~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~  343 (502)
                      .+.. . .|+++.+++..      ..++++++.+++.++++||+|||+++++|++++|++||++|+++|+|++++++...
T Consensus       240 ~~~~-~-~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~  311 (466)
T PLN02655        240 RGEE-R-DCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER  311 (466)
T ss_pred             CCCC-c-ccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC
Confidence            2222 2 68999999763      24899999999999999999999999999999999999999999999999998654


Q ss_pred             CCCcccccCChhHHHHHHHhhccCCCCCC-CCccccccceecCeecCCCCEEEechhhhcCCCCCCCCCCCCCCCccCCC
Q 010727          344 FVDEDDLETLQYLKAVLKETFRLQPPVPL-IPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFMGT  422 (502)
Q Consensus       344 ~~~~~~~~~lp~l~a~i~E~lRl~~~~~~-~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~  422 (502)
                       ++.+++++||||+|||+||||++|+++. .+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++.
T Consensus       312 -~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~  390 (466)
T PLN02655        312 -VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGE  390 (466)
T ss_pred             -CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCC
Confidence             9999999999999999999999999994 57999999999999999999999999999999999999999999999975


Q ss_pred             CCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccCceEEEEeecC
Q 010727          423 DCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKIPLKLMATKFI  502 (502)
Q Consensus       423 ~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  502 (502)
                      ...  ......++|||+|+|.|||++||..|+++++++||++|++++.++..  +  .....++++.+++++.+++++|.
T Consensus       391 ~~~--~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~r~  464 (466)
T PLN02655        391 KYE--SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE--E--KEDTVQLTTQKLHPLHAHLKPRG  464 (466)
T ss_pred             Ccc--cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc--c--ccchhheeEeecCCcEEEEeecC
Confidence            211  12346899999999999999999999999999999999999876542  1  22345667778889999998883


No 15 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-76  Score=533.35  Aligned_cols=452  Identities=22%  Similarity=0.364  Sum_probs=375.9

Q ss_pred             CCCCCCCccccccccC---CCCCCchHHHHHHHhhCCcEEEE-ecCcCEEEecCHHHHHHHHHhCCCcccCCC-Cccccc
Q 010727           28 PPGPPGLPIIGNIHQY---DTSNPPRYLWELSKKYGPLMYLR-FGSLPTLIISSAKMAKEVMRTNDLQFSGRP-NLTGQK  102 (502)
Q Consensus        28 ppgP~~~p~~G~~~~~---~~~~~~~~~~~~~~kyG~v~~~~-~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~-~~~~~~  102 (502)
                      +|||+++|++|.++.+   ...+.|+.....+++||+||+.. +|+...|++.||++++.+++.. ..++.|+ ....+.
T Consensus        52 IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~E-G~~P~Rp~~~~~w~  130 (519)
T KOG0159|consen   52 IPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNE-GKYPFRPLLIEPWV  130 (519)
T ss_pred             cCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcC-CCCCCcccccchhh
Confidence            7999999999998743   24567888999999999999999 8999999999999999999855 4556664 222211


Q ss_pred             c--cccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhcc---CCCCccHHHHHHHHHHH
Q 010727          103 A--FSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSAS---ASEPANLSEIIMSLLCN  177 (502)
Q Consensus       103 ~--~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~---~~~~vdl~~~~~~~~~~  177 (502)
                      .  -.+++..++++..|++|.+.|..+...++++++++.|.|.++..++++++.++...+   ...+.|+.+.+.+++++
T Consensus       131 ~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wslE  210 (519)
T KOG0159|consen  131 AYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWSLE  210 (519)
T ss_pred             hhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHH
Confidence            1  133455678888899999999997777899999999999999999999999988765   23478999999999999


Q ss_pred             HHHHHHhcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHHHhHHHHHHHHHHh
Q 010727          178 LICRIAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDE  257 (502)
Q Consensus       178 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  257 (502)
                      .||.++||.+++.....  ..++.+.+++++..++.........  .+++++++  ++.++++.++.+.+.++....|+.
T Consensus       211 si~~V~l~~rlG~L~~~--~~~~a~~fi~ai~~~F~~s~~l~~~--p~l~r~~~--t~~wk~~~~~~D~i~~~~~~~Id~  284 (519)
T KOG0159|consen  211 SICLVLLGTRLGLLGES--PPSEAQQFIDAIKKMFESSAQLMLM--PSLWRYFP--TKVWKDFVRAWDQIFDVGDKYIDN  284 (519)
T ss_pred             HHHHHHHhcccccccCC--CCHHHHHHHHHHHHHHHhHHHHHhc--chHHHhCC--ChHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999985422  3345677888888877665443221  14555553  467899999999999999999888


Q ss_pred             hcCCCCCCCC---CCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHH
Q 010727          258 HLDPNRPKVD---QQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEE  334 (502)
Q Consensus       258 ~~~~~~~~~~---~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~E  334 (502)
                      ..++.+....   +. .+++..++..       ..++.+++...++++++||.||||+++.|+||+|++||++|++|++|
T Consensus       285 ~l~~l~~~~~~~~~~-~~~l~~~L~~-------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~E  356 (519)
T KOG0159|consen  285 ALEELEKQDSAGSEY-TGSLLELLLR-------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREE  356 (519)
T ss_pred             HHHHHHhccccccch-hHHHHHHHHH-------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHH
Confidence            8765543222   22 2334444332       25888999999999999999999999999999999999999999999


Q ss_pred             HHHHhcC-CCCCCcccccCChhHHHHHHHhhccCCCCCCCCccccccceecCeecCCCCEEEechhhhcCCCCCCCCCCC
Q 010727          335 VRSVAKN-KGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWDKPDE  413 (502)
Q Consensus       335 i~~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~  413 (502)
                      +.++... +..++.+++.+||||.||||||+|+||.+++..|+..+|.+++||.|||||.|.+..+.+.+||++|++|++
T Consensus       357 i~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~  436 (519)
T KOG0159|consen  357 ILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEE  436 (519)
T ss_pred             HHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCccc
Confidence            9999987 678999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccCc
Q 010727          414 FIPERFMGTDCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKIP  493 (502)
Q Consensus       414 F~P~R~l~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (502)
                      |+|||||++..  ...+++.++|||.|+|+|+|+++|.+|+-++|++|+++|+++..++.   +  .+....+++.|..+
T Consensus       437 F~PeRWL~~~~--~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~---p--v~~~~~~il~P~~~  509 (519)
T KOG0159|consen  437 FLPERWLKPST--KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE---P--VEYVYRFILVPNRP  509 (519)
T ss_pred             cChhhhccccc--CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC---C--ccceeEEEEcCCCC
Confidence            99999998732  34578999999999999999999999999999999999999987753   3  44455666777778


Q ss_pred             eEEEEeec
Q 010727          494 LKLMATKF  501 (502)
Q Consensus       494 ~~~~~~~r  501 (502)
                      +.+++++|
T Consensus       510 l~f~f~~r  517 (519)
T KOG0159|consen  510 LRFKFRPR  517 (519)
T ss_pred             cceeeeeC
Confidence            99998887


No 16 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=8.6e-75  Score=562.82  Aligned_cols=471  Identities=23%  Similarity=0.427  Sum_probs=349.5

Q ss_pred             CCCCCCCCCCccccccccCCCCCCc-hHHHHHHHhh-CCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCccccc
Q 010727           25 KTFPPGPPGLPIIGNIHQYDTSNPP-RYLWELSKKY-GPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTGQK  102 (502)
Q Consensus        25 ~~~ppgP~~~p~~G~~~~~~~~~~~-~~~~~~~~ky-G~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~~~  102 (502)
                      .++||||+++|++||++.+...++. .++.++.++| |++|++++|+.++|+|+||+.+++++.++...|+.++......
T Consensus        39 ~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~  118 (534)
T PLN03018         39 RQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIME  118 (534)
T ss_pred             CCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhh
Confidence            3479999999999999887332232 4566777776 7999999999999999999999999998877788877544433


Q ss_pred             ccccCccceEecCCchHHHHHHHHHHHhhc-chhhhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHHHH
Q 010727          103 AFSYKHIDVAFTPYSNYWREMRKICVIHLF-NANRLRQFRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCNLICR  181 (502)
Q Consensus       103 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~  181 (502)
                      .+..++.++.+..+|+.|+++|+. +++.| +......+.+..+.+++++++.+.+..+.+.++|+.+.+..+++|++++
T Consensus       119 ~l~~~~~~i~~~~~G~~Wk~~Rk~-l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~  197 (534)
T PLN03018        119 TIGDNYKSMGTSPYGEQFMKMKKV-ITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMR  197 (534)
T ss_pred             hhccCCCceEecCCCHHHHHHHHH-HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHH
Confidence            332222345666679999999999 56654 4444455556666778999999976444456799999999999999999


Q ss_pred             HHhcccccCCCcchhccch-hHHHHHHHHHHHhh---hcccccccccc-cccccccchhhhHHHHHHHHhHHHHHHHHHH
Q 010727          182 IAFSKRCEDDDGQAERVGN-KTRFHHILAETQAM---AGSFFFSDFFP-FMGWVDTLTGKNRRLKKAFEDSDKFYQELVD  256 (502)
Q Consensus       182 ~~fG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  256 (502)
                      ++||.++...+........ ...+..........   +......+.+| ++++.. +.+...+.......+.+++.+.++
T Consensus       198 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~  276 (534)
T PLN03018        198 MLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWN-IDGQEERAKVNVNLVRSYNNPIID  276 (534)
T ss_pred             HHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence            9999998542211000000 11111112211111   11111122233 332111 112233444455667788888888


Q ss_pred             hhcCCCCC-CCCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHH
Q 010727          257 EHLDPNRP-KVDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEV  335 (502)
Q Consensus       257 ~~~~~~~~-~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei  335 (502)
                      ++.+..+. .......|+++.|++...+.+ ...++++++++++.++++||+|||+++++|++++|+.||++|+|+++||
T Consensus       277 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei  355 (534)
T PLN03018        277 ERVELWREKGGKAAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKEL  355 (534)
T ss_pred             HHHHHhhhccCCCCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence            77643221 111112689999998654332 1148999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCcccccCChhHHHHHHHhhccCCCCCC-CCccccccceecCeecCCCCEEEechhhhcCCCCCCCCCCCC
Q 010727          336 RSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPL-IPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWDKPDEF  414 (502)
Q Consensus       336 ~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~-~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F  414 (502)
                      +++++.++.++.+++.+||||+|||+||+|++|+++. .+|++.+|++++||.|||||.|+++.+++||||++|+||++|
T Consensus       356 ~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F  435 (534)
T PLN03018        356 DEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVY  435 (534)
T ss_pred             HHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCcccc
Confidence            9999877778999999999999999999999999995 579999999999999999999999999999999999999999


Q ss_pred             CCCccCCCCCCCc----CCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccc
Q 010727          415 IPERFMGTDCVDF----QGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHK  490 (502)
Q Consensus       415 ~P~R~l~~~~~~~----~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  490 (502)
                      +||||++.++...    ...+..++|||+|+|.|+|++||.+|+++++++|+++|++++.++.  .+++.....+++..+
T Consensus       436 ~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~p  513 (534)
T PLN03018        436 EPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDF--GPLSLEEDDASLLMA  513 (534)
T ss_pred             CCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCC--CCCCccccccceecC
Confidence            9999997532110    1245679999999999999999999999999999999999987653  133333333545444


Q ss_pred             cCceEEEEeec
Q 010727          491 KIPLKLMATKF  501 (502)
Q Consensus       491 ~~~~~~~~~~r  501 (502)
                       .++++.+++|
T Consensus       514 -~~~~v~~~~R  523 (534)
T PLN03018        514 -KPLLLSVEPR  523 (534)
T ss_pred             -CCeEEEEEec
Confidence             5899999988


No 17 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2.9e-76  Score=567.26  Aligned_cols=453  Identities=26%  Similarity=0.493  Sum_probs=361.8

Q ss_pred             CCCCCCCCCCCccccccccCCCC--CCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCcc-c
Q 010727           24 KKTFPPGPPGLPIIGNIHQYDTS--NPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLT-G  100 (502)
Q Consensus        24 ~~~~ppgP~~~p~~G~~~~~~~~--~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~-~  100 (502)
                      ....||||.++|++|++..+...  +...++.++..+||++|+.+++|.++|+++||+.+++|+.++...+.+.+.+. .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            45789999999999999888433  45678889999999999999999999999999999999976555555555544 2


Q ss_pred             ccccccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHHH
Q 010727          101 QKAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCNLIC  180 (502)
Q Consensus       101 ~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~  180 (502)
                      ...+.  |.+++++. |+.|+++||+ ..++|+...++.+...+.+.+..+...+..... ++.+|+.+.+.++++|+++
T Consensus       113 ~~~~l--G~gll~~~-g~~W~~~Rk~-~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~~~~tld~i~  187 (497)
T KOG0157|consen  113 LKPWL--GDGLLFSD-GEKWHKHRKL-LTPAFHFEILKSFVPVFIESSLILLLLLELAAS-GEEVDLQDLLKRLTLDIIC  187 (497)
T ss_pred             HHHHh--cCccccCC-chHHHHHHhh-ccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeEcHHHHHHHHHHHHHH
Confidence            22222  34455555 9999999999 899999999999999999999998888877432 3339999999999999999


Q ss_pred             HHHhcccc-cCCCcchhccchhHHHHHHHHHHHhhhcccccccccc-cccccccchhhhHHHHHHHHhHHHHHHHHHHhh
Q 010727          181 RIAFSKRC-EDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFP-FMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEH  258 (502)
Q Consensus       181 ~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  258 (502)
                      .++||... +.+.      .....+..++......+.   .....| +..++..+. ..++..++.+.+.+++++.|+++
T Consensus       188 ~~~~G~~~~~~~~------~~~~~~~~a~~~~~~~~~---~~~~~p~~~~~~~~~~-~~~~~~~a~~~~~~~~~~iI~~r  257 (497)
T KOG0157|consen  188 KTAMGPESLDAEG------PELFEYVQAFDDLTELIS---KRINLPLGTKFLYGLK-SERKLKKARKILHDFLEKIIRER  257 (497)
T ss_pred             HHhcCCccccccC------CcccHHHHHHHHHHHHHH---HHHcCchhhhHHhhcc-hHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999222 1111      123345555554433322   223345 334444333 67888899999999999999998


Q ss_pred             cCCCCCCC---CCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHH
Q 010727          259 LDPNRPKV---DQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEV  335 (502)
Q Consensus       259 ~~~~~~~~---~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei  335 (502)
                      ++......   .....|+++.+.....     ..++++++++++.++++||+||||++++|++++|+.||++|+++++|+
T Consensus       258 r~~~~~~~~~~~~~~~d~L~~~~~~~~-----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi  332 (497)
T KOG0157|consen  258 REELEKEGSGEEKKRLDFLDTLLLEED-----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEV  332 (497)
T ss_pred             HHHHHhcCCcccchhhhHHHHHHHhcc-----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            86433211   1223778886333222     369999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCC-CCcccccCChhHHHHHHHhhccCCCCCCCCcccccccee-cCeecCCCCEEEechhhhcCCCCCCC-CCC
Q 010727          336 RSVAKNKGF-VDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTAEECVV-DGYKIEAKTLAYVNTLAIGRDSEVWD-KPD  412 (502)
Q Consensus       336 ~~~~~~~~~-~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i-~g~~ip~gt~v~~~~~~~~~d~~~~~-~p~  412 (502)
                      .++++.... ++..+.++|+||++||+||||+||++|.+.|.+.+|+++ +||.||||+.|.++++.+|||+.+|+ ||+
T Consensus       333 ~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~  412 (497)
T KOG0157|consen  333 DEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPE  412 (497)
T ss_pred             HHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChh
Confidence            999985433 333344469999999999999999999999999999999 58999999999999999999999997 999


Q ss_pred             CCCCCccCCCCCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccC
Q 010727          413 EFIPERFMGTDCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKI  492 (502)
Q Consensus       413 ~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  492 (502)
                      +||||||++++... ..++++|+|||+|+|.|+|++||++|+|+++++|+++|++++..+..     ......++++++.
T Consensus       413 ~F~PeRf~~~~~~~-~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~  486 (497)
T KOG0157|consen  413 EFDPERFLDGEEKA-KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-----PKPVPELTLRPKN  486 (497)
T ss_pred             hcCccccCCCCCcC-CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-----ceeeeEEEEEecC
Confidence            99999999753222 44578999999999999999999999999999999999999877642     4456788999999


Q ss_pred             ceEEEEeecC
Q 010727          493 PLKLMATKFI  502 (502)
Q Consensus       493 ~~~~~~~~r~  502 (502)
                      +++|++++|.
T Consensus       487 gl~v~~~~r~  496 (497)
T KOG0157|consen  487 GLKVKLRPRG  496 (497)
T ss_pred             CeEEEEEeCC
Confidence            9999999983


No 18 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.9e-75  Score=566.69  Aligned_cols=437  Identities=18%  Similarity=0.309  Sum_probs=336.1

Q ss_pred             CCCCCCCCCCCccccccccCC----CCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCcc
Q 010727           24 KKTFPPGPPGLPIIGNIHQYD----TSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLT   99 (502)
Q Consensus        24 ~~~~ppgP~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~   99 (502)
                      +.++||||+++|++||++.+.    .+.++.++.+++++||+++++++|+.++|+++||+++++++.++...|+.+....
T Consensus        36 ~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~  115 (490)
T PLN02500         36 RFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRS  115 (490)
T ss_pred             CCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchH
Confidence            356899999999999976442    1345678899999999999999999999999999999999987766665332211


Q ss_pred             cccccccCccceEecCCchHHHHHHHHHHHhhcchhhhhh-hhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHH
Q 010727          100 GQKAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQ-FRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCNL  178 (502)
Q Consensus       100 ~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~  178 (502)
                      ... . . +...++..+|+.|+++|+. +.+.|++.+++. +.+.+.+.+..+++.|..    ++.+|+.+.+..+++++
T Consensus       116 ~~~-~-~-g~~~~~~~~g~~wr~~Rk~-~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~vd~~~~~~~~~~~v  187 (490)
T PLN02500        116 IGG-I-L-GKWSMLVLVGDMHRDMRSI-SLNFLSHARLRTHLLKEVERHTLLVLDSWKE----NSTFSAQDEAKKFTFNL  187 (490)
T ss_pred             HHH-H-h-CcccccccCCHHHHHHHHH-HHHhcChHHHHHHHHHHHHHHHHHHHHHhCC----CCCEEehHHHHHHHHHH
Confidence            111 1 1 2224555679999999999 679999999887 567888888888877743    45799999999999999


Q ss_pred             HHHHHhcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHHHhHHHHHHHHHHhh
Q 010727          179 ICRIAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEH  258 (502)
Q Consensus       179 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  258 (502)
                      +++++||.+.+..+        ...+...+.........  ....+|..        ..++..++.+.+.+++.+.++++
T Consensus       188 i~~~~fg~~~~~~~--------~~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~~~~~~~~~i~~~  249 (490)
T PLN02500        188 MAKHIMSMDPGEEE--------TEQLKKEYVTFMKGVVS--APLNFPGT--------AYRKALKSRATILKFIERKMEER  249 (490)
T ss_pred             HHHHHhCCCCCchH--------HHHHHHHHHHHHhhhhc--chhcCCCc--------ccHHHHHHHHHHHHHHHHHHHHH
Confidence            99999998754211        22222222222211100  01112221        12344556677888888888877


Q ss_pred             cCCCCCCC-CCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHH
Q 010727          259 LDPNRPKV-DQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRS  337 (502)
Q Consensus       259 ~~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~  337 (502)
                      .+..+.+. .....|+++.+++.       ..++++++++++.++++||+|||+++++|++++|++||++|+|+|+|+++
T Consensus       250 ~~~~~~~~~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~  322 (490)
T PLN02500        250 IEKLKEEDESVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLE  322 (490)
T ss_pred             HHhhhcccCCCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence            65432211 11126899999974       14899999999999999999999999999999999999999999999999


Q ss_pred             Hhc-----CCCCCCcccccCChhHHHHHHHhhccCCCCCCCCccccccceecCeecCCCCEEEechhhhcCCCCCCCCCC
Q 010727          338 VAK-----NKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWDKPD  412 (502)
Q Consensus       338 ~~~-----~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~  412 (502)
                      +++     ..+.++.+|+++||||+|||+||+|++|+++.++|.+.+|++++||.|||||.|+++.+++||||++|+||+
T Consensus       323 v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~  402 (490)
T PLN02500        323 IARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQ  402 (490)
T ss_pred             HhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCcc
Confidence            864     234589999999999999999999999999977899999999999999999999999999999999999999


Q ss_pred             CCCCCccCCCCCCCc-----CCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCcc
Q 010727          413 EFIPERFMGTDCVDF-----QGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVA  487 (502)
Q Consensus       413 ~F~P~R~l~~~~~~~-----~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  487 (502)
                      +||||||+++++...     ...+..++|||+|+|.|+|++||++|+++++++|+++|++++.++..  ..  . ... .
T Consensus       403 ~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~--~~--~-~~~-~  476 (490)
T PLN02500        403 LFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQ--AF--A-FPF-V  476 (490)
T ss_pred             ccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCc--ce--e-ccc-c
Confidence            999999997532111     12356799999999999999999999999999999999999876542  11  1 122 2


Q ss_pred             ccccCceEEEEee
Q 010727          488 MHKKIPLKLMATK  500 (502)
Q Consensus       488 ~~~~~~~~~~~~~  500 (502)
                      .++ .+++|++++
T Consensus       477 ~~~-~~l~~~~~~  488 (490)
T PLN02500        477 DFP-KGLPIRVRR  488 (490)
T ss_pred             cCC-CCceEEEEe
Confidence            333 488888765


No 19 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=3.8e-74  Score=554.26  Aligned_cols=432  Identities=18%  Similarity=0.273  Sum_probs=340.2

Q ss_pred             ccCCCCCCCCCCCccccccccCCCCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCcccc
Q 010727           22 KHKKTFPPGPPGLPIIGNIHQYDTSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTGQ  101 (502)
Q Consensus        22 ~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~~  101 (502)
                      +.+++.||||+++|++||++.+ .+++..++++++++||++|++++++.++++++||+.+++++.++...+..+......
T Consensus        27 ~~r~~~ppgp~~~P~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~  105 (463)
T PLN02774         27 YSKKGLPPGTMGWPLFGETTEF-LKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSML  105 (463)
T ss_pred             cCCCCCCCCCCCCCchhhHHHH-HHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHH
Confidence            3456789999999999999887 556778999999999999999999999999999999999998766555333221111


Q ss_pred             cccccCccceEecCCchHHHHHHHHHHHhhcchhhhhh-hhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHHH
Q 010727          102 KAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQ-FRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCNLIC  180 (502)
Q Consensus       102 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~  180 (502)
                      . . . +.+++++.+|+.|+++|+. +.++|++..++. +.+.+.+.++++++.|..    ++++|+.+.+..+++++++
T Consensus       106 ~-~-l-g~~~~~~~~g~~w~~~R~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~  177 (463)
T PLN02774        106 D-I-L-GTCNIAAVHGSTHRYMRGS-LLSLISPTMIRDHLLPKIDEFMRSHLSGWDG----LKTIDIQEKTKEMALLSAL  177 (463)
T ss_pred             H-H-h-CccchhhcCCHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHhhCC----CCCEEeeHHHHHHHHHHHH
Confidence            1 1 1 2234556689999999999 678999999886 688998888888888743    4579999999999999999


Q ss_pred             HHHhcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHHHhHHHHHHHHHHhhcC
Q 010727          181 RIAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEHLD  260 (502)
Q Consensus       181 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  260 (502)
                      .++||.+...         ....+...+...   ....   ..+|.  +++.  ...++..++.+.+.+++.+.++++.+
T Consensus       178 ~~~~g~~~~~---------~~~~~~~~~~~~---~~~~---~~~~~--~lp~--~~~~~~~~~~~~~~~~~~~~i~~r~~  238 (463)
T PLN02774        178 KQIAGTLSKP---------ISEEFKTEFFKL---VLGT---LSLPI--DLPG--TNYRSGVQARKNIVRMLRQLIQERRA  238 (463)
T ss_pred             HHHcCCCChH---------HHHHHHHHHHHH---hccc---ccCCc--CCCC--hhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999976431         011222222211   1110   01121  1111  12345566778888889999988765


Q ss_pred             CCCCCCCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHHhc
Q 010727          261 PNRPKVDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAK  340 (502)
Q Consensus       261 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~  340 (502)
                      ...   ..  .|+++.+++...++   ..++++++.+++.++++||+|||+++++|++++|++||++|+|+|+|++++++
T Consensus       239 ~~~---~~--~d~l~~ll~~~~~~---~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~  310 (463)
T PLN02774        239 SGE---TH--TDMLGYLMRKEGNR---YKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRE  310 (463)
T ss_pred             cCC---Cc--ccHHHHHHhCccCC---CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence            421   12  79999999743222   25899999999999999999999999999999999999999999999999986


Q ss_pred             C---CCCCCcccccCChhHHHHHHHhhccCCCCCCCCccccccceecCeecCCCCEEEechhhhcCCCCCCCCCCCCCCC
Q 010727          341 N---KGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPE  417 (502)
Q Consensus       341 ~---~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~  417 (502)
                      .   +..++.+++++||||+|||+|+||++|+++.+.|.+.+|++++||.||||+.|+++.+.+||||++|+||++|+||
T Consensus       311 ~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~Pe  390 (463)
T PLN02774        311 RKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPW  390 (463)
T ss_pred             ccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCch
Confidence            3   3568999999999999999999999999998789999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccCceEEE
Q 010727          418 RFMGTDCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKIPLKLM  497 (502)
Q Consensus       418 R~l~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (502)
                      ||++.+.   . ....++|||+|+|.|||+++|++|++++++.|+++|++++.++.+   +.  . .. ...++++++++
T Consensus       391 Rfl~~~~---~-~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~---~~--~-~~-~~~p~~g~~~~  459 (463)
T PLN02774        391 RWLDKSL---E-SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDK---LM--K-FP-RVEAPNGLHIR  459 (463)
T ss_pred             hcCCCCc---C-CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCc---cc--c-CC-CCCCCCCceEE
Confidence            9996521   1 123599999999999999999999999999999999999976542   11  1 11 22356788888


Q ss_pred             Eee
Q 010727          498 ATK  500 (502)
Q Consensus       498 ~~~  500 (502)
                      +++
T Consensus       460 ~~~  462 (463)
T PLN02774        460 VSP  462 (463)
T ss_pred             eee
Confidence            874


No 20 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=4.9e-74  Score=555.84  Aligned_cols=462  Identities=19%  Similarity=0.336  Sum_probs=344.4

Q ss_pred             HHhccCCCCCCCCCCCccccccccCCCCC--CchHHHHHHHhhCCcEE---EEecCcCEEEecCHHHHHHHHHhCCCccc
Q 010727           19 LLRKHKKTFPPGPPGLPIIGNIHQYDTSN--PPRYLWELSKKYGPLMY---LRFGSLPTLIISSAKMAKEVMRTNDLQFS   93 (502)
Q Consensus        19 ~~~~~~~~~ppgP~~~p~~G~~~~~~~~~--~~~~~~~~~~kyG~v~~---~~~~~~~~v~v~d~~~i~~i~~~~~~~~~   93 (502)
                      ..++++++-.|||+++|++||+..+..+.  .++++.+...+||..++   .++|+.++|+|+||+.+++|+.++...|+
T Consensus        24 ~~~~~~~~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~  103 (500)
T PLN02169         24 FFIHKKPHGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYP  103 (500)
T ss_pred             HHHHhccCCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCC
Confidence            34555555688899999999987663221  22333333444886665   57789999999999999999988766676


Q ss_pred             CCCCcccccccccCccceEecCCchHHHHHHHHHHHhhcchhhhhhh--hHHHHHHHHHHHHHHHhhccCCCCccHHHHH
Q 010727           94 GRPNLTGQKAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQF--RPVRENEVSRMIEKISKSASASEPANLSEII  171 (502)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~--~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~  171 (502)
                      ++........  ..+ .++++.+|+.|+++||. ++++|+..+++.+  .+.+.+.++.+++.+++...++.++|+.+.+
T Consensus       104 k~~~~~~~~~--~~g-~gl~~~~g~~Wr~~Rk~-l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~  179 (500)
T PLN02169        104 KGPEFKKIFD--VLG-EGILTVDFELWEDLRKS-NHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVF  179 (500)
T ss_pred             CcHHHHHHHH--hhc-CcccccCcHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHH
Confidence            6543322211  112 45666679999999999 7899999887643  4677788888988887655556789999999


Q ss_pred             HHHHHHHHHHHHhcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccc-c-ccc-hhhhHHHHHHHHhHH
Q 010727          172 MSLLCNLICRIAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGW-V-DTL-TGKNRRLKKAFEDSD  248 (502)
Q Consensus       172 ~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-~-~~~-~~~~~~~~~~~~~~~  248 (502)
                      ..+++|+++.++||.+.+..+..    .....+...+........   .....|++.+ + .++ .+..++..++.+.+.
T Consensus       180 ~~~t~dvi~~~~fG~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (500)
T PLN02169        180 MRFMFDTSSILMTGYDPMSLSIE----MLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVN  252 (500)
T ss_pred             HHHHHHHHHhheeCCCccccCCC----CCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHH
Confidence            99999999999999987542210    011233333333222111   1122232211 1 011 134566778888899


Q ss_pred             HHHHHHHHhhcCCCC-C-CCCCCcccHHHHHHHhhhcCc-ccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCc
Q 010727          249 KFYQELVDEHLDPNR-P-KVDQQQEDIIDVLLRIRKNSE-TKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNP  325 (502)
Q Consensus       249 ~~~~~~i~~~~~~~~-~-~~~~~~~d~l~~ll~~~~~~~-~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p  325 (502)
                      +++.+.|+++++... . +......|+++.+++...+.. ....++++++.+++.++++||+|||+++++|++|+|++||
T Consensus       253 ~~~~~~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~P  332 (500)
T PLN02169        253 RMFAKIISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHP  332 (500)
T ss_pred             HHHHHHHHHHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCH
Confidence            999999988865321 1 111112689999997643211 0124788999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCCCCCcccccCChhHHHHHHHhhccCCCCCCCCccccccce-ecCeecCCCCEEEechhhhcCC
Q 010727          326 ATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTAEECV-VDGYKIEAKTLAYVNTLAIGRD  404 (502)
Q Consensus       326 ~~q~~lr~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~-i~g~~ip~gt~v~~~~~~~~~d  404 (502)
                      ++|+|+++||++++      +.+|+.+||||+|||+||||+||++|.+.|.+.+|.+ ++||.|||||.|+++++++|||
T Consensus       333 evq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd  406 (500)
T PLN02169        333 QVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRM  406 (500)
T ss_pred             HHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCC
Confidence            99999999998873      6789999999999999999999999977777776655 4999999999999999999999


Q ss_pred             CCCC-CCCCCCCCCccCCCCCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCC
Q 010727          405 SEVW-DKPDEFIPERFMGTDCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDIL  483 (502)
Q Consensus       405 ~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  483 (502)
                      |++| +||++||||||++++.......+..|+|||+|+|.|+|++||++|+++++++|+++|++++.++.   ++  ...
T Consensus       407 ~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~---~~--~~~  481 (500)
T PLN02169        407 RSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH---KI--EAI  481 (500)
T ss_pred             ccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC---Cc--ccc
Confidence            9999 89999999999975322111236789999999999999999999999999999999999987543   22  234


Q ss_pred             CCccccccCceEEEEeecC
Q 010727          484 PGVAMHKKIPLKLMATKFI  502 (502)
Q Consensus       484 ~~~~~~~~~~~~~~~~~r~  502 (502)
                      .++++.++.++++++++|+
T Consensus       482 ~~~~l~~~~gl~l~l~~~~  500 (500)
T PLN02169        482 PSILLRMKHGLKVTVTKKI  500 (500)
T ss_pred             cceEEecCCCEEEEEEeCC
Confidence            5677888889999999985


No 21 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=3.3e-74  Score=562.95  Aligned_cols=458  Identities=22%  Similarity=0.358  Sum_probs=342.5

Q ss_pred             CCCCCCCCCCccccccccCCCCCCchHHHHHHHhh---CCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCcccc
Q 010727           25 KTFPPGPPGLPIIGNIHQYDTSNPPRYLWELSKKY---GPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTGQ  101 (502)
Q Consensus        25 ~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~~  101 (502)
                      ++.+|||+++|++||++.+. .+ +..+.+|.++|   |++|++++++.++|+++||+.+++|+.++...|..+......
T Consensus        29 ~~~~pgp~~~p~~G~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~  106 (516)
T PLN03195         29 QRNRKGPKSWPIIGAALEQL-KN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSY  106 (516)
T ss_pred             ccccCCCCCCCeecchHHHH-hc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHH
Confidence            34579999999999987653 22 44567778888   899999999999999999999999998764555544322111


Q ss_pred             cccccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHH-HHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHHH
Q 010727          102 KAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVR-ENEVSRMIEKISKSASASEPANLSEIIMSLLCNLIC  180 (502)
Q Consensus       102 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~-~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~  180 (502)
                      .... .+ ..+++.+|+.|+++||. +++.|+.++++.+.+.+ .+.++.+.+.+.+....+.++|+.+++..+++|+++
T Consensus       107 ~~~~-~g-~~l~~~~g~~w~~~Rr~-l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~  183 (516)
T PLN03195        107 MEVL-LG-DGIFNVDGELWRKQRKT-ASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSIC  183 (516)
T ss_pred             HHHH-hc-CeeeccCcHHHHHHHHh-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHH
Confidence            1011 12 34667789999999999 78999999999999876 666777777776543456789999999999999999


Q ss_pred             HHHhcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccc-hhhhHHHHHHHHhHHHHHHHHHHhhc
Q 010727          181 RIAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTL-TGKNRRLKKAFEDSDKFYQELVDEHL  259 (502)
Q Consensus       181 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~  259 (502)
                      .++||.+++..+...    ....+...++.......   .....|++.....+ .+..+...+..+.+.+++.+.++++.
T Consensus       184 ~~~fG~~~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  256 (516)
T PLN03195        184 KVGFGVEIGTLSPSL----PENPFAQAFDTANIIVT---LRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRK  256 (516)
T ss_pred             HHHhCCCccccccCC----CccHHHHHHHHHHHHHH---HHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999987533110    01233333332221110   00111221110000 11234445566778888888888775


Q ss_pred             CCCCCC---CCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHH
Q 010727          260 DPNRPK---VDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVR  336 (502)
Q Consensus       260 ~~~~~~---~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~  336 (502)
                      +....+   ......|+++.+++...+.+  ..++++++.++++++++||+|||+++++|++|+|++||++|+|||+|++
T Consensus       257 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~  334 (516)
T PLN03195        257 AEMDEARKSGKKVKHDILSRFIELGEDPD--SNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELK  334 (516)
T ss_pred             HHHhccccccccccccHHHHHHhccCCCC--CCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            432211   11112689999997643322  3599999999999999999999999999999999999999999999999


Q ss_pred             HHhcC--------------------CCCCCcccccCChhHHHHHHHhhccCCCCCCCCcccccccee-cCeecCCCCEEE
Q 010727          337 SVAKN--------------------KGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTAEECVV-DGYKIEAKTLAY  395 (502)
Q Consensus       337 ~~~~~--------------------~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i-~g~~ip~gt~v~  395 (502)
                      ++.+.                    ++.++.+++.+||||+|||+||||++|+++...|.+.+|.++ +||.|||||.|+
T Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~  414 (516)
T PLN03195        335 ALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVT  414 (516)
T ss_pred             HhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEE
Confidence            87642                    245889999999999999999999999999777777777665 999999999999


Q ss_pred             echhhhcCCCCCC-CCCCCCCCCccCCCCCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCC
Q 010727          396 VNTLAIGRDSEVW-DKPDEFIPERFMGTDCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMK  474 (502)
Q Consensus       396 ~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~  474 (502)
                      ++.+.+||||++| +||++|+||||++.+. .....+..++|||+|+|.|+|++||++|++++++.|+++|++++.++. 
T Consensus       415 ~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~-~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~-  492 (516)
T PLN03195        415 YVPYSMGRMEYNWGPDAASFKPERWIKDGV-FQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH-  492 (516)
T ss_pred             EehHhhccChhhhccChhhcCCcccCCCCC-cCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC-
Confidence            9999999999999 9999999999996421 112245679999999999999999999999999999999999987543 


Q ss_pred             CCcCCccCCCCccccccCceEEEEeecC
Q 010727          475 NEDLDYDILPGVAMHKKIPLKLMATKFI  502 (502)
Q Consensus       475 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~  502 (502)
                        +..+  ....+..++.+++|++++|.
T Consensus       493 --~~~~--~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        493 --PVKY--RMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             --ccee--eeeeEEecCCCEEEEEEeCC
Confidence              2222  23345667779999999883


No 22 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.3e-73  Score=559.97  Aligned_cols=439  Identities=23%  Similarity=0.367  Sum_probs=334.5

Q ss_pred             cccccCCCCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCcccccccccCccceEecCCc
Q 010727           38 GNIHQYDTSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTGQKAFSYKHIDVAFTPYS  117 (502)
Q Consensus        38 G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  117 (502)
                      ||+..+..+.++..+.++++|||+||++++|+.++|+|+||+.+++|+.++...|.++.........  .+ ..+++.+|
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~--~g-~~l~~~dg  219 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV--MG-KGLIPADG  219 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc--cC-CceecCCc
Confidence            3333343455678899999999999999999999999999999999998766666654332111111  12 34566789


Q ss_pred             hHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHHHHHHhcccccCCCcchhc
Q 010727          118 NYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCNLICRIAFSKRCEDDDGQAER  197 (502)
Q Consensus       118 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~  197 (502)
                      +.|+++|+. +.+.|+..+++.+.+.+.+.++++++.|.+...+++++|+...+..+++|+|+.++||.+++..+.    
T Consensus       220 e~wr~rRr~-l~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~----  294 (633)
T PLN02738        220 EIWRVRRRA-IVPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSN----  294 (633)
T ss_pred             HHHHHHHHh-ccHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCcccccc----
Confidence            999999999 789999999999999999999999999987655678999999999999999999999999875221    


Q ss_pred             cchhHHHHHHHHHHHhhhccccc----ccccccccccccchhhhHHHHHHHHhHHHHHHHHHHhhcC-------CCCCC-
Q 010727          198 VGNKTRFHHILAETQAMAGSFFF----SDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEHLD-------PNRPK-  265 (502)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~-  265 (502)
                         .+.+...+............    ...+|++..+   .+..++..+..+.+.+++.++++.+.+       ..... 
T Consensus       295 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l---~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~  368 (633)
T PLN02738        295 ---DTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDI---SPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEY  368 (633)
T ss_pred             ---chHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhh---chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcc
Confidence               11222222222211111001    1112222211   122233444444455555544443221       10000 


Q ss_pred             CCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCCCC
Q 010727          266 VDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFV  345 (502)
Q Consensus       266 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~  345 (502)
                      ......|+++.|++..      ..++++++.++++.+++||+|||+++|+|++++|++||++|+|||+|++++++. +.+
T Consensus       369 ~~~~~~dil~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~  441 (633)
T PLN02738        369 MNERDPSILHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFP  441 (633)
T ss_pred             cccccchHHHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCC
Confidence            0112258999998752      258999999999999999999999999999999999999999999999999884 568


Q ss_pred             CcccccCChhHHHHHHHhhccCCCCCCCCccccccceecCeecCCCCEEEechhhhcCCCCCCCCCCCCCCCccCCCCC-
Q 010727          346 DEDDLETLQYLKAVLKETFRLQPPVPLIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFMGTDC-  424 (502)
Q Consensus       346 ~~~~~~~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~-  424 (502)
                      +.+++.+||||+|||+|+||++|+++.+.|++.+|++++||.|||||.|+++.+.+||||++||||++|+||||+..+. 
T Consensus       442 t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~  521 (633)
T PLN02738        442 TIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPN  521 (633)
T ss_pred             CHHHHccCHHHHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCC
Confidence            9999999999999999999999999977799999999999999999999999999999999999999999999985311 


Q ss_pred             CCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccCceEEEEeec
Q 010727          425 VDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKIPLKLMATKF  501 (502)
Q Consensus       425 ~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  501 (502)
                      .........++|||.|+|.|+|++||++|++++|++|+++|++++.++..  +  .....+.+..++.++++++++|
T Consensus       522 ~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~--~--~~~~~~~~~~p~~~l~v~l~~R  594 (633)
T PLN02738        522 PNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP--P--VKMTTGATIHTTEGLKMTVTRR  594 (633)
T ss_pred             ccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC--C--cccccceEEeeCCCcEEEEEEC
Confidence            11223456899999999999999999999999999999999999876642  2  2233455666777999999988


No 23 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=5e-75  Score=568.56  Aligned_cols=456  Identities=32%  Similarity=0.569  Sum_probs=364.8

Q ss_pred             CCCCCCCccccccccCC-CCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCcccccc-cc
Q 010727           28 PPGPPGLPIIGNIHQYD-TSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTGQKA-FS  105 (502)
Q Consensus        28 ppgP~~~p~~G~~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~~~~-~~  105 (502)
                      ||||+++|++||++.+. .++++.++.+++++||++|++++++.+.++|+||+.+++++.++...++.++....... ..
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            89999999999999884 26678889999999999999999999999999999999999987666655433222222 11


Q ss_pred             cCccceEecCCchHHHHHHHHHHHhhcchh-hhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHHHHHHh
Q 010727          106 YKHIDVAFTPYSNYWREMRKICVIHLFNAN-RLRQFRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCNLICRIAF  184 (502)
Q Consensus       106 ~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~-~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~f  184 (502)
                      ......++..+|+.|+.+|+. +.+.|+.. .+ .+.+.+.+.++++++.|.+....++.+|+.+++..+++|+++.++|
T Consensus        81 ~~~~~~l~~~~~~~~~~~R~~-~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~f  158 (463)
T PF00067_consen   81 PFGGKGLFFSDGERWRRQRRL-LAPAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLF  158 (463)
T ss_dssp             HHTTTSSTTSSHHHHHHHHHH-HHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccc-ccccccccccc-ccccccccccccccccccccccccceeeeecccccccccccccccc
Confidence            123445666668999999999 67888877 66 8999999999999999998765555799999999999999999999


Q ss_pred             cccccCCCcchhccchhHHHHHHHHHHHhhhcc--cccccccccccccccchhhhHHHHHHHHhHHHHHHHHHHhhcCCC
Q 010727          185 SKRCEDDDGQAERVGNKTRFHHILAETQAMAGS--FFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEHLDPN  262 (502)
Q Consensus       185 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  262 (502)
                      |.+++..+.     .....+.+.+......+..  ......+|++.+++  ....+...++.+.+.+++.+.++++.+..
T Consensus       159 G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  231 (463)
T PF00067_consen  159 GKDFGSLDD-----EDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP--TPLFRRFKRARDRLRKYIKEIIEERREEL  231 (463)
T ss_dssp             SSHHHGTTH-----HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred             cceeeeccc-----ccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccc
Confidence            999874331     1123455555555443321  12334556554443  23566777777888999999999988765


Q ss_pred             CCCCCCCcccHHHHHHHhh-hcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcC
Q 010727          263 RPKVDQQQEDIIDVLLRIR-KNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKN  341 (502)
Q Consensus       263 ~~~~~~~~~d~l~~ll~~~-~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~  341 (502)
                      +.+.. ...|+++.+++.. ...+ +..++.+++.++++.+++||+|||+++++|++++|++||++|++||+|++++.+.
T Consensus       232 ~~~~~-~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  309 (463)
T PF00067_consen  232 DDGDE-SRRDLLDSLLQASSDSDG-PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGD  309 (463)
T ss_dssp             HSSSS-SCSSHHHHHHHHHHTTTT-TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTT
T ss_pred             ccccc-cccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            54311 2289999999986 2222 1479999999999999999999999999999999999999999999999999977


Q ss_pred             CCCCCcccccCChhHHHHHHHhhccCCCCC-CCCccccccceecCeecCCCCEEEechhhhcCCCCCCCCCCCCCCCccC
Q 010727          342 KGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFM  420 (502)
Q Consensus       342 ~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~-~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l  420 (502)
                      ++.++.+++.+||||+|||+||+|++|+++ .++|++.+|++++||.|||||.|+++.+.+|+||++|+||++|+||||+
T Consensus       310 ~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~  389 (463)
T PF00067_consen  310 GREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFL  389 (463)
T ss_dssp             SSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGB
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            778999999999999999999999999999 8899999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccCceEEEE
Q 010727          421 GTDCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKIPLKLMA  498 (502)
Q Consensus       421 ~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (502)
                      +.+. .....+..++|||.|+|.|+|++||+.|+++++++||++||+++.++....+  .....+++.+++ ++.|.+
T Consensus       390 ~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~  463 (463)
T PF00067_consen  390 DERG-ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEP--QEQQNGFLLPPK-PLKVKF  463 (463)
T ss_dssp             TTTS-TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGE--EECSCSSSEEES-SSEEEE
T ss_pred             cccc-ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCC--ccccCceEeeCC-CcEEeC
Confidence            8733 2234678899999999999999999999999999999999999977653222  222224555554 666653


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.7e-72  Score=542.20  Aligned_cols=426  Identities=19%  Similarity=0.323  Sum_probs=340.6

Q ss_pred             CCCCCCCCCCccccccccCCCCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCccccccc
Q 010727           25 KTFPPGPPGLPIIGNIHQYDTSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTGQKAF  104 (502)
Q Consensus        25 ~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~~~~~  104 (502)
                      .+.||||+++|++||++.+..++++.++.+++++||++++++++++++|+++||+++++++.++...|.  +........
T Consensus        34 ~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~~~~  111 (463)
T PLN02196         34 LPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPASKER  111 (463)
T ss_pred             CCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchHHHH
Confidence            356888989999999877546788999999999999999999999999999999999999987766552  222111111


Q ss_pred             ccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHHHHHHh
Q 010727          105 SYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCNLICRIAF  184 (502)
Q Consensus       105 ~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~f  184 (502)
                      .. +...+++.+|+.|+++||. +.+.|++++++.+.+.+++.++++++.|.     +.++|+.+++..+++++++.++|
T Consensus       112 ~~-g~~~l~~~~g~~w~~~Rk~-l~~~f~~~~l~~~~~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~~~~f  184 (463)
T PLN02196        112 ML-GKQAIFFHQGDYHAKLRKL-VLRAFMPDAIRNMVPDIESIAQESLNSWE-----GTQINTYQEMKTYTFNVALLSIF  184 (463)
T ss_pred             Hc-CcccccccCcHHHHHHHHH-HHHhcChHHHHHHHHHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHHHHHHc
Confidence            12 2345666789999999999 78899999999999999999999998874     34689999999999999999999


Q ss_pred             cccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHHHhHHHHHHHHHHhhcCCCCC
Q 010727          185 SKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEHLDPNRP  264 (502)
Q Consensus       185 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  264 (502)
                      |.+....         ...+..........+      ..+|+.  ++.  ...++..++.+.+.+++.+.++++.+... 
T Consensus       185 G~~~~~~---------~~~~~~~~~~~~~~~------~~~~~~--~p~--~~~~~~~~a~~~~~~~~~~~i~~~~~~~~-  244 (463)
T PLN02196        185 GKDEVLY---------REDLKRCYYILEKGY------NSMPIN--LPG--TLFHKSMKARKELAQILAKILSKRRQNGS-  244 (463)
T ss_pred             CCCCchH---------HHHHHHHHHHHhcch------hccccc--CCC--ccchHHHHHHHHHHHHHHHHHHHHhhcCC-
Confidence            9874310         111222221111111      112321  110  12345667778888889888888765421 


Q ss_pred             CCCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcC---
Q 010727          265 KVDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKN---  341 (502)
Q Consensus       265 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~---  341 (502)
                        ..  .|+++.+++..      .+++++++.++++.+++||+|||+++++|++++|++||++|+++++|++++.+.   
T Consensus       245 --~~--~d~l~~ll~~~------~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~  314 (463)
T PLN02196        245 --SH--NDLLGSFMGDK------EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEE  314 (463)
T ss_pred             --Cc--ccHHHHHHhcC------CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhccccc
Confidence              12  68999988631      258999999999999999999999999999999999999999999999998764   


Q ss_pred             CCCCCcccccCChhHHHHHHHhhccCCCCCCCCccccccceecCeecCCCCEEEechhhhcCCCCCCCCCCCCCCCccCC
Q 010727          342 KGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFMG  421 (502)
Q Consensus       342 ~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~  421 (502)
                      ++.++.+++.+||||+|||+|++|++|+++...|.+.+|++++||.|||||.|+++.+.+|+||++|+||++|+||||++
T Consensus       315 ~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~  394 (463)
T PLN02196        315 GESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEV  394 (463)
T ss_pred             CCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcC
Confidence            35689999999999999999999999999977799999999999999999999999999999999999999999999996


Q ss_pred             CCCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccCceEEEEeec
Q 010727          422 TDCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKIPLKLMATKF  501 (502)
Q Consensus       422 ~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  501 (502)
                      .      ..+..++|||+|+|.|+|+++|+.|+++++++|+++|++++.+++.  ...    ...+..|+.+++|+++++
T Consensus       395 ~------~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~~----~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        395 A------PKPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN--GIQ----YGPFALPQNGLPIALSRK  462 (463)
T ss_pred             C------CCCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC--ceE----EcccccCCCCceEEEecC
Confidence            4      1346799999999999999999999999999999999999876531  222    222334677888887754


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=8.8e-72  Score=536.69  Aligned_cols=435  Identities=19%  Similarity=0.287  Sum_probs=340.8

Q ss_pred             ccCCCCCCCCCCCccccccccCC----CCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCC
Q 010727           22 KHKKTFPPGPPGLPIIGNIHQYD----TSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPN   97 (502)
Q Consensus        22 ~~~~~~ppgP~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~   97 (502)
                      +.++++||||.++|++||++.+.    ..+++.++.+++++||+||++++++.+.|+++||+++++++.++...|+.+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            45577899999999999988762    24678899999999999999999999999999999999999987776664422


Q ss_pred             cccccccccCccceEecCCchHHHHHHHHHHHhhcchhhhhhh-hHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHH
Q 010727           98 LTGQKAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQF-RPVRENEVSRMIEKISKSASASEPANLSEIIMSLLC  176 (502)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~-~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~  176 (502)
                      . ......  +...+++.+|+.|+++|+. +.+.|+..++..+ .+.+.+.++++++.|.    .+.++|+.+.+..+++
T Consensus        83 ~-~~~~l~--g~~~~~~~~g~~wr~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  154 (452)
T PLN03141         83 K-SLTELM--GKSSILLINGSLQRRVHGL-IGAFLKSPHLKAQITRDMERYVSESLDSWR----DDPPVLVQDETKKIAF  154 (452)
T ss_pred             h-hHHHHh--CcccccccCcHHHHHHHHH-HHHhcCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCEEhHHHHHHHHH
Confidence            1 111121  2345666789999999999 6788887777663 5666666666666553    3567999999999999


Q ss_pred             HHHHHHHhcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHHHhHHHHHHHHHH
Q 010727          177 NLICRIAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVD  256 (502)
Q Consensus       177 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  256 (502)
                      +++++++||.+.+.         +...+...+..+.....      .+|+  +++.  ...++..++.+.+.+++.+.|+
T Consensus       155 ~vi~~~~~G~~~~~---------~~~~~~~~~~~~~~~~~------~~~~--~~p~--~~~~~~~~~~~~l~~~~~~~i~  215 (452)
T PLN03141        155 EVLVKALISLEPGE---------EMEFLKKEFQEFIKGLM------SLPI--KLPG--TRLYRSLQAKKRMVKLVKKIIE  215 (452)
T ss_pred             HHHHHHHcCCCchH---------HHHHHHHHHHHHhhhHH------hCcc--CCCc--hHhHHHHHHHHHHHHHHHHHHH
Confidence            99999999976531         12222222222222111      1221  1111  1223445667888889999988


Q ss_pred             hhcCCCCCCCC---CCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHH
Q 010727          257 EHLDPNRPKVD---QQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQE  333 (502)
Q Consensus       257 ~~~~~~~~~~~---~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~  333 (502)
                      ++.+..+.+..   ....|+++.++++..     ..++++++++++..+++||+|||+++++|++++|++||++|+++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~-----~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~  290 (452)
T PLN03141        216 EKRRAMKNKEEDETGIPKDVVDVLLRDGS-----DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTE  290 (452)
T ss_pred             HHHHHHhccCccccCChhhHHHHHHhcCC-----CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHH
Confidence            87654322111   112689999987531     2589999999999999999999999999999999999999999999


Q ss_pred             HHHHHhc----CCCCCCcccccCChhHHHHHHHhhccCCCCCCCCccccccceecCeecCCCCEEEechhhhcCCCCCCC
Q 010727          334 EVRSVAK----NKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWD  409 (502)
Q Consensus       334 Ei~~~~~----~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~  409 (502)
                      |++++.+    .+..++.+++.+||||+|||+|++|++|+++.++|.+.+|++++||.||||+.|+++.+.+|+||++|+
T Consensus       291 Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~  370 (452)
T PLN03141        291 ENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYD  370 (452)
T ss_pred             HHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcC
Confidence            9988753    234578999999999999999999999999988899999999999999999999999999999999999


Q ss_pred             CCCCCCCCccCCCCCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCcccc
Q 010727          410 KPDEFIPERFMGTDCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMH  489 (502)
Q Consensus       410 ~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  489 (502)
                      ||++|+||||++.+     ..+..++|||+|+|.|+|++||++|+++++++|+++|++++.++.   ..     ...++.
T Consensus       371 dP~~F~PeRfl~~~-----~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~---~~-----~~~~~~  437 (452)
T PLN03141        371 NPYQFNPWRWQEKD-----MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT---IV-----NFPTVR  437 (452)
T ss_pred             CccccCcccccCCC-----CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC---ee-----eccccc
Confidence            99999999999752     135679999999999999999999999999999999999986642   11     113567


Q ss_pred             ccCceEEEEeec
Q 010727          490 KKIPLKLMATKF  501 (502)
Q Consensus       490 ~~~~~~~~~~~r  501 (502)
                      ++.++.|.+++|
T Consensus       438 ~~~~~~~~~~~~  449 (452)
T PLN03141        438 MKRKLPIWVTRI  449 (452)
T ss_pred             CCCCceEEEEeC
Confidence            777899999988


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=5.2e-71  Score=539.76  Aligned_cols=436  Identities=22%  Similarity=0.302  Sum_probs=340.6

Q ss_pred             CCCCCCCCCCccccccccCC----CCCCchHHHHHHHhhCC--cEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCc
Q 010727           25 KTFPPGPPGLPIIGNIHQYD----TSNPPRYLWELSKKYGP--LMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNL   98 (502)
Q Consensus        25 ~~~ppgP~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~--v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~   98 (502)
                      .++||||+++|++|+++.+.    ..+++.++.+++++||+  ++++++++.++|+++||+++++++.++ +.|..+...
T Consensus        41 ~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~~  119 (490)
T PLN02302         41 PPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWPE  119 (490)
T ss_pred             CCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCch
Confidence            46899999999999987763    34678899999999997  789999999999999999999999855 445433222


Q ss_pred             ccccccccCccceEecCCchHHHHHHHHHHHhhc-chhhhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHH
Q 010727           99 TGQKAFSYKHIDVAFTPYSNYWREMRKICVIHLF-NANRLRQFRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCN  177 (502)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  177 (502)
                      ....  .. +...+...+|+.|+++|+. +.+.| ++++++.+.+.+.+.++++++.|..    ++.+|+.+.+..++++
T Consensus       120 ~~~~--~~-g~~~~~~~~g~~w~~~R~~-~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~~~~~~~  191 (490)
T PLN02302        120 STVE--LI-GRKSFVGITGEEHKRLRRL-TAAPVNGPEALSTYIPYIEENVKSCLEKWSK----MGEIEFLTELRKLTFK  191 (490)
T ss_pred             hHHH--Hh-ccccccccCcHHHHHHHHH-HHhccCCHHHHHHHHHHHHHHHHHHHHHhcC----CCCEehHHHHHHHHHH
Confidence            1111  11 2344555679999999999 67777 5788999999999999999998854    3469999999999999


Q ss_pred             HHHHHHhcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHHHhHHHHHHHHHHh
Q 010727          178 LICRIAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDE  257 (502)
Q Consensus       178 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  257 (502)
                      ++++++||.++...         ...+..........+..  ....+|..        ..++..++.+.+.+++.+.+++
T Consensus       192 vi~~~~~G~~~~~~---------~~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~l~~~~~~~i~~  252 (490)
T PLN02302        192 IIMYIFLSSESELV---------MEALEREYTTLNYGVRA--MAINLPGF--------AYHRALKARKKLVALFQSIVDE  252 (490)
T ss_pred             HHHHHHcCCCChHH---------HHHHHHHHHHHHHHhhh--CCcCCCch--------hhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999875421         11222222111111110  01111211        1233445566777888888887


Q ss_pred             hcCCCCCCCCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHH
Q 010727          258 HLDPNRPKVDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRS  337 (502)
Q Consensus       258 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~  337 (502)
                      +.+....+......|+++.+++...+++  ..++++++.++++.+++||+|||+++++|++++|++||++|+|+|+|+++
T Consensus       253 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~  330 (490)
T PLN02302        253 RRNSRKQNISPRKKDMLDLLLDAEDENG--RKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEE  330 (490)
T ss_pred             HHHhhhccCCCCcCCHHHHHHhhhccCC--CCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            7654322211122799999998754332  35899999999999999999999999999999999999999999999999


Q ss_pred             HhcCC----CCCCcccccCChhHHHHHHHhhccCCCCCCCCccccccceecCeecCCCCEEEechhhhcCCCCCCCCCCC
Q 010727          338 VAKNK----GFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWDKPDE  413 (502)
Q Consensus       338 ~~~~~----~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~  413 (502)
                      +++..    ..++.+++++||||+|||+|++|++|+++..+|.+.+|++++||.||||+.|.++.+++||||++|+||++
T Consensus       331 v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~  410 (490)
T PLN02302        331 IAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKE  410 (490)
T ss_pred             HHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccc
Confidence            98642    13789999999999999999999999999778999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccCc
Q 010727          414 FIPERFMGTDCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKIP  493 (502)
Q Consensus       414 F~P~R~l~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (502)
                      |+||||++.+     ..+..++|||+|+|.|+|++||..|+++++++|+++|++++.++..  +  ..  ......|..+
T Consensus       411 F~PeR~~~~~-----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~--~~--~~~~~~p~~~  479 (490)
T PLN02302        411 FDPSRWDNYT-----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC--K--VM--YLPHPRPKDN  479 (490)
T ss_pred             cChhhcCCCC-----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC--c--ce--eCCCCCCCCC
Confidence            9999999641     2446799999999999999999999999999999999999875421  1  21  2222566678


Q ss_pred             eEEEEeec
Q 010727          494 LKLMATKF  501 (502)
Q Consensus       494 ~~~~~~~r  501 (502)
                      +.+++++|
T Consensus       480 ~~~~~~~~  487 (490)
T PLN02302        480 CLARITKV  487 (490)
T ss_pred             ceEEEEec
Confidence            99999887


No 27 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.7e-71  Score=487.79  Aligned_cols=445  Identities=21%  Similarity=0.334  Sum_probs=359.4

Q ss_pred             CCCCCCCC-CccccccccCCCCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCccccccc
Q 010727           26 TFPPGPPG-LPIIGNIHQYDTSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTGQKAF  104 (502)
Q Consensus        26 ~~ppgP~~-~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~~~~~  104 (502)
                      ..||.-.+ +|++|++..| ++++.+++++.++|||+||++.++|+.+.++.+|+....+++.+...++...........
T Consensus        31 ~~PPli~gwiP~lG~a~~f-gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~  109 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAF-GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTP  109 (486)
T ss_pred             CCCcccccCcchhhHHHHh-ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhh
Confidence            36776654 7999999999 899999999999999999999999999999999999999998764444333222111111


Q ss_pred             ccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHH-HHhhccCCCCccHHHHHHHHHHHHHHHHH
Q 010727          105 SYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEK-ISKSASASEPANLSEIIMSLLCNLICRIA  183 (502)
Q Consensus       105 ~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~~~vdl~~~~~~~~~~~i~~~~  183 (502)
                      . .+.+++....+....++.+. ....+...+++++.+.|.+++++.++. |.+   +|....+.+....+++.+.-.++
T Consensus       110 v-Fg~~v~~d~~~~~~~e~~~~-~k~~L~~~~lk~~~e~m~~el~~~f~~~~~~---s~~~d~l~~~~~~ii~tAs~~ll  184 (486)
T KOG0684|consen  110 V-FGKGVVYDVPNHVMMEQKKF-FKSALGGVALKSLVELMLEELHAYFETSLGE---SGETDGLYTFCRLIIFTASRLLL  184 (486)
T ss_pred             h-cCCCccccCCCchHHHHHHH-HHHHhchhhHHHHHHHHHHHHHHHHhccccc---ccchhHhhhhhHHHhhhhHHHhh
Confidence            2 13456666667778888888 677888999999999999999999988 443   57777888999999999988898


Q ss_pred             hcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHHHhHHHHHHHHHHhhcCCCC
Q 010727          184 FSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEHLDPNR  263 (502)
Q Consensus       184 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  263 (502)
                      ||+.....+         ++......++...+..  +...||.  +++.  ...++..++.+.+.+.+...+.++++..+
T Consensus       185 ~~e~r~~~d---------~~~a~l~~dLd~~F~~--~d~~FP~--~LP~--~~~r~~~ra~~~i~k~f~~~i~~rr~s~s  249 (486)
T KOG0684|consen  185 GGEVRDQLD---------ADVAKLYHDLDQGFQP--FDFLFPY--NLPI--PLLRRRDRARKKISKIFSKIILDRRASIS  249 (486)
T ss_pred             hhhhhhhhc---------chHHHHHHHHhccccc--hHhhccc--CCCc--chhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence            888765422         2233344444443332  2334553  2211  34566668888999999999998887653


Q ss_pred             CCCCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCC
Q 010727          264 PKVDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKG  343 (502)
Q Consensus       264 ~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~  343 (502)
                      .    ..+|+++.+++-.+++   .+.+++|+....+.+++||+.||+.|.+|++++|++|||+|+++++|+.+++|+..
T Consensus       250 ~----~~~dmlq~l~~~y~dg---~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~  322 (486)
T KOG0684|consen  250 K----WDNDMLQSLMEKYKDG---RPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKK  322 (486)
T ss_pred             c----ccHHHHHHHHHHhhcC---CcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccC
Confidence            2    1178999999833332   37999999999999999999999999999999999999999999999999999876


Q ss_pred             C-CCcccccCChhHHHHHHHhhccCCCCCCCCccccccceecC----eecCCCCEEEechhhhcCCCCCCCCCCCCCCCc
Q 010727          344 F-VDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTAEECVVDG----YKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPER  418 (502)
Q Consensus       344 ~-~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g----~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R  418 (502)
                      . ++.+.+++||+|++||+|||||+||.+.+.|.+.+|.++.+    |.||+|..|.++++.+|+||++|+||+.|+|+|
T Consensus       323 ~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dR  402 (486)
T KOG0684|consen  323 EKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDR  402 (486)
T ss_pred             CCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhh
Confidence            5 99999999999999999999999999988899999999965    999999999999999999999999999999999


Q ss_pred             cCCCCCCC---cCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccCceE
Q 010727          419 FMGTDCVD---FQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKIPLK  495 (502)
Q Consensus       419 ~l~~~~~~---~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (502)
                      |++++.++   ...-++.+||||+|.|.|||+.||.+|+|+++..+|++||+++.+++ ..++++...   +..|..+++
T Consensus       403 f~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~-~P~~d~s~~---v~~P~g~v~  478 (486)
T KOG0684|consen  403 FLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGP-FPEVDYSRM---VMQPEGDVR  478 (486)
T ss_pred             ccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCC-CCCCCHHHh---hcCCCCCce
Confidence            99765443   23344567999999999999999999999999999999999999873 234444333   677788999


Q ss_pred             EEEeecC
Q 010727          496 LMATKFI  502 (502)
Q Consensus       496 ~~~~~r~  502 (502)
                      +++|+|+
T Consensus       479 irYK~R~  485 (486)
T KOG0684|consen  479 IRYKRRP  485 (486)
T ss_pred             EEEeecC
Confidence            9999984


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1e-70  Score=527.48  Aligned_cols=432  Identities=18%  Similarity=0.262  Sum_probs=334.7

Q ss_pred             CCCCCCCCCCccccccccCC----CCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCccc
Q 010727           25 KTFPPGPPGLPIIGNIHQYD----TSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTG  100 (502)
Q Consensus        25 ~~~ppgP~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~  100 (502)
                      .++||||.++|++||++.+.    ..+++.++.+++++||++++++++++++|+++||+++++++.++...|..+.....
T Consensus        29 ~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~  108 (472)
T PLN02987         29 MRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGSI  108 (472)
T ss_pred             CCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHHH
Confidence            45799999999999998762    24578889999999999999999999999999999999999887777754432211


Q ss_pred             ccccccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhH-HHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHH
Q 010727          101 QKAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRP-VRENEVSRMIEKISKSASASEPANLSEIIMSLLCNLI  179 (502)
Q Consensus       101 ~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i  179 (502)
                      ...+   +...+++.+|+.|+++|++ ..+.++.+.++.+.. .+.+.++..++.|      .+++++.+.+..++++++
T Consensus       109 ~~~l---g~~~l~~~~g~~wr~~R~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~t~~vi  178 (472)
T PLN02987        109 SNLL---GKHSLLLMKGNLHKKMHSL-TMSFANSSIIKDHLLLDIDRLIRFNLDSW------SSRVLLMEEAKKITFELT  178 (472)
T ss_pred             HHHh---CcccccccCcHHHHHHHHH-HHHhcChHHHHHHHHHHHHHHHHHHHHhh------ccceehHHHHHHHHHHHH
Confidence            1211   2234555679999999999 555545555554431 1233333334433      136899999999999999


Q ss_pred             HHHHhcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHHHhHHHHHHHHHHhhc
Q 010727          180 CRIAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEHL  259 (502)
Q Consensus       180 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  259 (502)
                      ++++||.+.+..         .+.+...+......+    ....+|++      .+..++..++.+.+.+++.+.++++.
T Consensus       179 ~~~~fg~~~~~~---------~~~~~~~~~~~~~~~----~~~~~p~l------~~~~~~~~~~~~~~~~~~~~~i~~r~  239 (472)
T PLN02987        179 VKQLMSFDPGEW---------TESLRKEYVLVIEGF----FSVPLPLF------STTYRRAIQARTKVAEALTLVVMKRR  239 (472)
T ss_pred             HHHHcCCCChHH---------HHHHHHHHHHHHhhh----hcCCCcCC------CchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999765321         112222222111111    11223442      12456677788899999999999887


Q ss_pred             CCCCCCCCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHHh
Q 010727          260 DPNRPKVDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVA  339 (502)
Q Consensus       260 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~  339 (502)
                      +....+.. ...|+++.+++..      .+++++++.+++..+++||+|||+++++|++++|++||++|+++++|++++.
T Consensus       240 ~~~~~~~~-~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~  312 (472)
T PLN02987        240 KEEEEGAE-KKKDMLAALLASD------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIR  312 (472)
T ss_pred             hhhhccCc-ccccHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence            64332211 1279999999753      1589999999999999999999999999999999999999999999999987


Q ss_pred             c---CCCCCCcccccCChhHHHHHHHhhccCCCCCCCCccccccceecCeecCCCCEEEechhhhcCCCCCCCCCCCCCC
Q 010727          340 K---NKGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWDKPDEFIP  416 (502)
Q Consensus       340 ~---~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P  416 (502)
                      +   ....++.+++.+|||++||++|++|++|+++.++|++.+|++++||.|||||.|+++.+.+|+||++|+||++|||
T Consensus       313 ~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P  392 (472)
T PLN02987        313 AMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNP  392 (472)
T ss_pred             cccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCc
Confidence            5   2345789999999999999999999999999888999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccCceEE
Q 010727          417 ERFMGTDCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKIPLKL  496 (502)
Q Consensus       417 ~R~l~~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (502)
                      |||++.+..  ......++|||+|+|.|+|++||+.|+++++++|+++|++++.++.   ++.+    ..+..|..++++
T Consensus       393 eRfl~~~~~--~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~----~~~~~p~~~~~~  463 (472)
T PLN02987        393 WRWQSNSGT--TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQD---KLVF----FPTTRTQKRYPI  463 (472)
T ss_pred             ccCCCCCCC--CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC---ceee----cccccCCCCceE
Confidence            999975221  1234679999999999999999999999999999999999987653   2222    336777778999


Q ss_pred             EEeec
Q 010727          497 MATKF  501 (502)
Q Consensus       497 ~~~~r  501 (502)
                      ++++|
T Consensus       464 ~~~~r  468 (472)
T PLN02987        464 NVKRR  468 (472)
T ss_pred             EEEec
Confidence            99988


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=7.5e-71  Score=533.98  Aligned_cols=453  Identities=22%  Similarity=0.358  Sum_probs=348.9

Q ss_pred             CCCCCCCCCCccccccccCC----CCCCchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCccc
Q 010727           25 KTFPPGPPGLPIIGNIHQYD----TSNPPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTG  100 (502)
Q Consensus        25 ~~~ppgP~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~  100 (502)
                      .++=.|-.|||++|..+.+.    .+.++..+.+|+++||+++++++|+.++|+++||+++++|+.+....|..+.....
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~   90 (489)
T PLN02936         11 NRLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEV   90 (489)
T ss_pred             hccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhh
Confidence            34567888999999876653    45678899999999999999999999999999999999999876666765543221


Q ss_pred             ccccccCccceEecCCchHHHHHHHHHHHhhcchhhhhhhhH-HHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHH
Q 010727          101 QKAFSYKHIDVAFTPYSNYWREMRKICVIHLFNANRLRQFRP-VRENEVSRMIEKISKSASASEPANLSEIIMSLLCNLI  179 (502)
Q Consensus       101 ~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i  179 (502)
                      ....  .+ ..+++.+|+.|+++||. +++.|+..++..+.+ .+.++++.+++.|.+...+++++|+.+++..+++|++
T Consensus        91 ~~~~--~~-~~i~~~~g~~wk~~Rk~-l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi  166 (489)
T PLN02936         91 SEFL--FG-SGFAIAEGELWTARRRA-VVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVI  166 (489)
T ss_pred             hHHH--hc-CccccCCchHHHHHHHh-hcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHH
Confidence            1111  12 34566779999999999 789999888888754 7888999999999876556778999999999999999


Q ss_pred             HHHHhcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccc--cccchhhhHHHHHHHHhHHHHHHHHHHh
Q 010727          180 CRIAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGW--VDTLTGKNRRLKKAFEDSDKFYQELVDE  257 (502)
Q Consensus       180 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~  257 (502)
                      +.++||.+++..+.       ..++.+.+......... .....+|++.+  +..+.+..++..++.+.+.+++.+.+++
T Consensus       167 ~~~~fG~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~  238 (489)
T PLN02936        167 GLSVFNYNFDSLTT-------DSPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDK  238 (489)
T ss_pred             HHHHcCCCcccccc-------CcHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999875321       12233333322221111 11123333211  1111123445666677777777777776


Q ss_pred             hcCCCCC-------CC--CCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHH
Q 010727          258 HLDPNRP-------KV--DQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATM  328 (502)
Q Consensus       258 ~~~~~~~-------~~--~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q  328 (502)
                      +.+..+.       ..  .....|+++.|++...      .++.+++.++++.+++||+|||+++++|++++|++||++|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~  312 (489)
T PLN02936        239 CKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASRE------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEAL  312 (489)
T ss_pred             HHHHHhhcccccccccccccCchHHHHHHHhccc------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHH
Confidence            5432110       00  1122689999986531      4889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCcccccCChhHHHHHHHhhccCCCCC-CCCccccccceecCeecCCCCEEEechhhhcCCCCC
Q 010727          329 KKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKETFRLQPPVP-LIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEV  407 (502)
Q Consensus       329 ~~lr~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~-~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~  407 (502)
                      +++|+|++++++. +.++.+++++||||+|||+||+|++|+++ ..+|.+..|+.++||.|||||.|+++.+.+||||++
T Consensus       313 ~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~  391 (489)
T PLN02936        313 RKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEV  391 (489)
T ss_pred             HHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhh
Confidence            9999999999885 45889999999999999999999999999 566666777888999999999999999999999999


Q ss_pred             CCCCCCCCCCccCCCCCC-CcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCc
Q 010727          408 WDKPDEFIPERFMGTDCV-DFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGV  486 (502)
Q Consensus       408 ~~~p~~F~P~R~l~~~~~-~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  486 (502)
                      |+||++|+||||+..+.. .....+..++|||.|+|.|+|++||++|+++++++|+++|+++++++.   ++  ....++
T Consensus       392 ~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~---~~--~~~~~~  466 (489)
T PLN02936        392 WERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ---DI--VMTTGA  466 (489)
T ss_pred             CCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC---cc--ceecce
Confidence            999999999999964321 112234589999999999999999999999999999999999987653   22  122345


Q ss_pred             cccccCceEEEEeec
Q 010727          487 AMHKKIPLKLMATKF  501 (502)
Q Consensus       487 ~~~~~~~~~~~~~~r  501 (502)
                      +..++.+++|++++|
T Consensus       467 ~~~~~~~~~v~~~~R  481 (489)
T PLN02936        467 TIHTTNGLYMTVSRR  481 (489)
T ss_pred             EEeeCCCeEEEEEee
Confidence            566677899999988


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.8e-68  Score=516.04  Aligned_cols=442  Identities=18%  Similarity=0.258  Sum_probs=337.6

Q ss_pred             CCccccccccCCCCCCchHHHHHHHhhC-CcEEEEecCcCEEEecCHHHHHHHHHhCCCcccCCCCccc-ccccccCccc
Q 010727           33 GLPIIGNIHQYDTSNPPRYLWELSKKYG-PLMYLRFGSLPTLIISSAKMAKEVMRTNDLQFSGRPNLTG-QKAFSYKHID  110 (502)
Q Consensus        33 ~~p~~G~~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~v~v~d~~~i~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~  110 (502)
                      ..++.|++... -.+.++++..+.++++ .+++++..|.  ++++||+.+++++.++...|.+...... ...+.  + .
T Consensus        48 ~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~--g-~  121 (502)
T PLN02426         48 RAYLTASWAKD-FDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLL--G-R  121 (502)
T ss_pred             CCCccHHHHHh-cccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhc--C-C
Confidence            35588887664 2345777777888887 5777776554  8999999999999877666765433211 11111  2 3


Q ss_pred             eEecCCchHHHHHHHHHHHhhcchhhhhhhh--HHHHHHHHHHHHHHHhhccC--CCCccHHHHHHHHHHHHHHHHHhcc
Q 010727          111 VAFTPYSNYWREMRKICVIHLFNANRLRQFR--PVRENEVSRMIEKISKSASA--SEPANLSEIIMSLLCNLICRIAFSK  186 (502)
Q Consensus       111 ~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~--~~~~~~~~~l~~~l~~~~~~--~~~vdl~~~~~~~~~~~i~~~~fG~  186 (502)
                      .+++.+|+.|+++||. +++.|+.++++.+.  +.+++..+++++.+.+..+.  +.++|+.+++..+++|+++.++||.
T Consensus       122 gi~~~~g~~wk~~Rk~-l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~  200 (502)
T PLN02426        122 GIFNVDGDSWRFQRKM-ASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGL  200 (502)
T ss_pred             ceeecCcHHHHHHHHH-hHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCC
Confidence            4677789999999999 79999999998874  67777788888888765422  3679999999999999999999999


Q ss_pred             cccCCCcchhccchhHHHHHHHHHHHhhhccccccccccccccc-ccc-hhhhHHHHHHHHhHHHHHHHHHHhhcCCCCC
Q 010727          187 RCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWV-DTL-TGKNRRLKKAFEDSDKFYQELVDEHLDPNRP  264 (502)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~-~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  264 (502)
                      +++..+..    .....+...+......... ......|+++++ ..+ .+..++..++.+.+.+++.+.|+++.+... 
T Consensus       201 ~~~~l~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~-  274 (502)
T PLN02426        201 DPGCLELS----LPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF-  274 (502)
T ss_pred             CCcccCCC----CCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc-
Confidence            88653311    0123344444433221111 011122322211 011 123466777888899999999998875421 


Q ss_pred             CCCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCC-C
Q 010727          265 KVDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNK-G  343 (502)
Q Consensus       265 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~-~  343 (502)
                        .. ..|+++.+++..        .+++++.+++.++++||+|||+++++|++|+|++||++|+|||+|++++.+.+ .
T Consensus       275 --~~-~~dll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~  343 (502)
T PLN02426        275 --SA-SKDLLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQE  343 (502)
T ss_pred             --CC-cchHHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCC
Confidence              11 279999999752        36789999999999999999999999999999999999999999999998753 3


Q ss_pred             CCCcccccCChhHHHHHHHhhccCCCCCCCCcccccccee-cCeecCCCCEEEechhhhcCCCCCC-CCCCCCCCCccCC
Q 010727          344 FVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTAEECVV-DGYKIEAKTLAYVNTLAIGRDSEVW-DKPDEFIPERFMG  421 (502)
Q Consensus       344 ~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i-~g~~ip~gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~  421 (502)
                      .++.+++++||||+|||+|+||++|+++...|.+.+|+++ +||.|||||.|.++.+++||||++| +||++|+||||++
T Consensus       344 ~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~  423 (502)
T PLN02426        344 AASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLK  423 (502)
T ss_pred             CCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCC
Confidence            6899999999999999999999999999777999998887 9999999999999999999999999 8999999999997


Q ss_pred             CCCCCcCCccceeeeccCCCCCCCchHHHHHHHHHHHHHHHhhceeecCCCCCCCcCCccCCCCccccccCceEEEEeec
Q 010727          422 TDCVDFQGQHFELLPFGSGRRICPGISMAMRTLELALANLLYKFDWKMPDGMKNEDLDYDILPGVAMHKKIPLKLMATKF  501 (502)
Q Consensus       422 ~~~~~~~~~~~~~~~Fg~G~~~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  501 (502)
                      .+ ......+..++|||+|+|.|+|+++|++|++++++.|+++|++++.++..  + ......+++..++.+++|++++|
T Consensus       424 ~~-~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~-~~~~~~~~~~~~~~gl~v~~~~r  499 (502)
T PLN02426        424 NG-VFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSN--R-APRFAPGLTATVRGGLPVRVRER  499 (502)
T ss_pred             CC-CcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCC--C-CCcccceeEEecCCCEEEEEEEc
Confidence            42 11122346789999999999999999999999999999999999865421  1 12334567788888999999988


Q ss_pred             C
Q 010727          502 I  502 (502)
Q Consensus       502 ~  502 (502)
                      .
T Consensus       500 ~  500 (502)
T PLN02426        500 V  500 (502)
T ss_pred             c
Confidence            3


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=3.2e-61  Score=457.80  Aligned_cols=400  Identities=18%  Similarity=0.301  Sum_probs=294.4

Q ss_pred             CCCCCCCCCCccccccccCC----CCCCchHHHHHHHhhCC-cEEEEecCcCE-------EEecCHHHHHHHHHh----C
Q 010727           25 KTFPPGPPGLPIIGNIHQYD----TSNPPRYLWELSKKYGP-LMYLRFGSLPT-------LIISSAKMAKEVMRT----N   88 (502)
Q Consensus        25 ~~~ppgP~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------v~v~d~~~i~~i~~~----~   88 (502)
                      .+.|||+.++|++|++.++.    ..++..++.+.++|||+ ||++.++|.|+       |+++||++++.+|..    +
T Consensus        16 ~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~   95 (480)
T PLN02648         16 LREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDK   95 (480)
T ss_pred             CCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccc
Confidence            35699999999999997642    45567999999999998 99999999766       999999999999974    3


Q ss_pred             CCcccCCCCcccccccccCccc---eEecCCchHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhccCCCCc
Q 010727           89 DLQFSGRPNLTGQKAFSYKHID---VAFTPYSNYWREMRKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSASASEPA  165 (502)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v  165 (502)
                      ...+..... .... + . |..   .+++.+|+.|+++|++ +.++|+ ..++.+.+.|.+.++++++.|......+.++
T Consensus        96 ~~~~~~~~~-~~~~-l-~-G~~~~~s~~~~~g~~H~r~Rrl-l~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~v  169 (480)
T PLN02648         96 RDVFTGTYM-PSTA-F-T-GGYRVLSYLDPSEPKHAKLKSF-LFELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKA  169 (480)
T ss_pred             cccceeeec-cCcc-c-c-CCceeeeecCCCCchHHHHHHH-HHHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCc
Confidence            322322111 1112 2 1 333   6677789999999999 789999 4778899999999999999996543345579


Q ss_pred             cHHHHHHHHHHHHHHHHHhcccccCCCcchhccchhHHHHHHHHHHHhhhcccccccccccccccccchhhhHH------
Q 010727          166 NLSEIIMSLLCNLICRIAFSKRCEDDDGQAERVGNKTRFHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRR------  239 (502)
Q Consensus       166 dl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~------  239 (502)
                      |+.+.++.+++|++++++||.+.+.+.       -.+.+..........       ...|.....  +....++      
T Consensus       170 dv~~~~~~lt~~vi~~~lfG~~~~~~~-------l~~~~~~~~~~~~~~-------~~~p~~~~~--l~~~~~~~i~~~~  233 (480)
T PLN02648        170 EFNDPLDQMAFNFLCKALTGKDPSETA-------LGSDGPALIQKWLAL-------QLAPLASTG--LPHVLEELLLHTF  233 (480)
T ss_pred             cccchHHHHHHHHHHHHHcCCCcchhh-------hccchhHHHHHHHHH-------HhhHHHHcC--chHHHHHHhhccc
Confidence            999999999999999999998654310       011111112111100       001110000  0000000      


Q ss_pred             ------HHHHHHhHHHHHHHHHHhhcCCCCCCCCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHH-HHHhcccchHH
Q 010727          240 ------LKKAFEDSDKFYQELVDEHLDPNRPKVDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMD-VFVAGTDTSVA  312 (502)
Q Consensus       240 ------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~-~~~AG~~tt~~  312 (502)
                            ..+..+.+.+++.+                   .++.+++...+.    +++++|++++++. +.+++++||++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~-------------------~~~~ll~~~~~~----~l~~~ei~~~~l~~~~~~t~~~~~~  290 (480)
T PLN02648        234 PLPFFLVKSDYDKLYDFFRA-------------------SATEALDLAEKF----GISREEALHNLLFVLGFNAFGGFKI  290 (480)
T ss_pred             CCchhhhhccHHHHHHHHHH-------------------HHHHHHHHHHhc----CCCHHHHHHHHHHHHHHHhhHHHHH
Confidence                  00111111111111                   122334332222    4999999999875 34577778888


Q ss_pred             HHHHHHHHHHhCch-HHHHHHHHHHHHhcC-CCCCCcccccCChhHHHHHHHhhccCCCCCCCCccccccceec----Ce
Q 010727          313 TLVWSMTNLMRNPA-TMKKAQEEVRSVAKN-KGFVDEDDLETLQYLKAVLKETFRLQPPVPLIPRSTAEECVVD----GY  386 (502)
Q Consensus       313 ~l~~~l~~L~~~p~-~q~~lr~Ei~~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~----g~  386 (502)
                      +++|++|+|++||+ +|++||+|++++++. ++.++.+++.+||||++||+|+||++|+++...|.+.+|++++    ||
T Consensus       291 ~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~  370 (480)
T PLN02648        291 FFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAF  370 (480)
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceE
Confidence            99999999999995 999999999999863 4568999999999999999999999999997778899999996    79


Q ss_pred             ecCCCCEEEechhhhcCCCCCCCCCCCCCCCccCCCCCCCcCCccceeeec---------cCCCCCCCchHHHHHHHHHH
Q 010727          387 KIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFMGTDCVDFQGQHFELLPF---------GSGRRICPGISMAMRTLELA  457 (502)
Q Consensus       387 ~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~F---------g~G~~~C~G~~la~~~~~~~  457 (502)
                      .||||+.|+++.+.+||||++|+||++|||+||++++..    ....+++|         |+|+|.|+|++||+.|++++
T Consensus       371 ~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~----~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~  446 (480)
T PLN02648        371 EIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE----KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLF  446 (480)
T ss_pred             EECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc----ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHH
Confidence            999999999999999999999999999999999864221    11234444         67789999999999999999


Q ss_pred             HHHHHhhce-eecCCCC
Q 010727          458 LANLLYKFD-WKMPDGM  473 (502)
Q Consensus       458 l~~ll~~f~-~~~~~~~  473 (502)
                      +++|+++|+ +++.++.
T Consensus       447 la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        447 VAELFLRYDSFEIEVDT  463 (480)
T ss_pred             HHHHHHHhCEEeecCCc
Confidence            999999998 9987764


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.2e-55  Score=415.40  Aligned_cols=360  Identities=27%  Similarity=0.415  Sum_probs=293.7

Q ss_pred             CchHHHHHHHhhCCcEEEEecCcC--EEEecCHHHHHHHHHhCCCcccCCCCccccc--ccccCccceEecCCchHHHHH
Q 010727           48 PPRYLWELSKKYGPLMYLRFGSLP--TLIISSAKMAKEVMRTNDLQFSGRPNLTGQK--AFSYKHIDVAFTPYSNYWREM  123 (502)
Q Consensus        48 ~~~~~~~~~~kyG~v~~~~~~~~~--~v~v~d~~~i~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~  123 (502)
                      +......+.+.||.+++++..++.  .+++++++.++++++++. .+++........  .....+...+++.+|+.|+++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            345566788889988888776665  799999999999998764 222221111111  112223344778889999999


Q ss_pred             HHHHHHhhcchhhhhhhhHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHHHHHHHhcccccCCCcchhccchhHH
Q 010727          124 RKICVIHLFNANRLRQFRPVRENEVSRMIEKISKSASASEPANLSEIIMSLLCNLICRIAFSKRCEDDDGQAERVGNKTR  203 (502)
Q Consensus       124 R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  203 (502)
                      ||+ +++.|+++.++.+.+.+.+.++++++.+ .   .+..+++.+.+..+++++|+ .+||.+...          ...
T Consensus       103 Rkl-~~~~F~~~~~~~~~~~i~~~~~~~~~~~-~---~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~----------~~~  166 (411)
T COG2124         103 RKL-LAPAFTPRALRGYRPLIREIADRLLDDL-W---QGGADLVLDFAAELTLRVIA-ELLGVPLED----------RPQ  166 (411)
T ss_pred             HHH-hccccCHHHHHHHHHHHHHHHHHHHHhc-c---cCCchhHHHHhhhhhHHHHH-HHhCCCHHH----------HHH
Confidence            999 8999999999999999999999999999 3   22778899999999999999 999988642          222


Q ss_pred             HHHHHHHHHhhhcccccccccccccccccchhhhHHHHHHHHhHHHHHHHHHHhhcCCCCCCCCCCcccHHHHHHHhhhc
Q 010727          204 FHHILAETQAMAGSFFFSDFFPFMGWVDTLTGKNRRLKKAFEDSDKFYQELVDEHLDPNRPKVDQQQEDIIDVLLRIRKN  283 (502)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~  283 (502)
                      +..........        ..|....    .....+..++...+.+++.++|++++....       +|+++.|+.+..+
T Consensus       167 ~~~~~~~~~~~--------~~~~~~~----~~~~~~~~~a~~~~~~~~~~li~~rR~~~~-------~dlls~l~~a~~~  227 (411)
T COG2124         167 LLRWSDALLLR--------LDPDLGP----EEPWRRARAARRELDAYLRALIAERRAAPR-------DDLLSLLLSAEDD  227 (411)
T ss_pred             HHHHHHHHHhc--------cCcccCC----cccHHHHHHHHHHHHHHHHHHHHHhccCCc-------ccHHHHHHHHhhC
Confidence            22222221111        0021111    123567788889999999999999883321       8999999988776


Q ss_pred             CcccccCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCCCCCcccccCChhHHHHHHHh
Q 010727          284 SETKIDLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQYLKAVLKET  363 (502)
Q Consensus       284 ~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~  363 (502)
                      ++  ..+|++|++++++++++||+|||+++|+|++|.|++||++++++++|.+.                ||++++++|+
T Consensus       228 ~~--~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~  289 (411)
T COG2124         228 GG--GRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEET  289 (411)
T ss_pred             CC--CcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHH
Confidence            54  15999999999999999999999999999999999999999999999755                8999999999


Q ss_pred             hccCCCCCCCCccccccceecCeecCCCCEEEechhhhcCCCCCCCCCCCCCCCccCCCCCCCcCCccceeeeccCCCCC
Q 010727          364 FRLQPPVPLIPRSTAEECVVDGYKIEAKTLAYVNTLAIGRDSEVWDKPDEFIPERFMGTDCVDFQGQHFELLPFGSGRRI  443 (502)
Q Consensus       364 lRl~~~~~~~~R~~~~~~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~~~  443 (502)
                      ||++|+++..+|++++|++++|+.||||+.|+++.+++||||++|++|++|||+||.           ..++|||+|+|.
T Consensus       290 LR~~ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~-----------~~~l~FG~G~H~  358 (411)
T COG2124         290 LRLYPPVPLARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN-----------NAHLPFGGGPHR  358 (411)
T ss_pred             HHhCCchhccceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC-----------CCCcCCCCCCcc
Confidence            999999999999999999999999999999999999999999999999999999995           569999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHhhceeecCCC
Q 010727          444 CPGISMAMRTLELALANLLYKFDWKMPDG  472 (502)
Q Consensus       444 C~G~~la~~~~~~~l~~ll~~f~~~~~~~  472 (502)
                      |+|.+||++|++++++.|+++|++....+
T Consensus       359 ClG~~lA~~E~~~~l~~ll~r~~~~~~~~  387 (411)
T COG2124         359 CLGAALARLELKVALAELLRRFPLLLLAE  387 (411)
T ss_pred             ccCHHHHHHHHHHHHHHHHHhCchhhcCC
Confidence            99999999999999999999998876554


No 33 
>PF05084 GRA6:  Granule antigen protein (GRA6);  InterPro: IPR008119  Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage [].  The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=66.01  E-value=11  Score=29.54  Aligned_cols=31  Identities=29%  Similarity=0.653  Sum_probs=20.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 010727            3 IELILILLSLPISLLFLLRKHKKTFPPGPPG   33 (502)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~ppgP~~   33 (502)
                      |..+++++.+..+++.+.++..++.||-|.+
T Consensus       154 IG~~VlA~~VA~L~~~F~RR~~rrsppepsg  184 (215)
T PF05084_consen  154 IGAVVLAVSVAMLTWFFLRRTGRRSPPEPSG  184 (215)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Confidence            4555666666666666666667788888864


No 34 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=57.55  E-value=2.5  Score=35.26  Aligned_cols=43  Identities=19%  Similarity=0.190  Sum_probs=32.0

Q ss_pred             CChhHHHHHHHhhccCCCCCCCCccccccceecCeecCCCCEEE
Q 010727          352 TLQYLKAVLKETFRLQPPVPLIPRSTAEECVVDGYKIEAKTLAY  395 (502)
Q Consensus       352 ~lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~gt~v~  395 (502)
                      .-..+.|||.|++-...... +.=+..+|+.++|..|||||.+.
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~-vrlRLle~i~i~g~~IPkgt~l~   93 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSR-VRLRLLEDIQIGGILIPKGTYLY   93 (200)
T ss_pred             CCCeEEEEEecceEEeCCCE-EEEEEcCceEECCEEeCCCCEEE
Confidence            34567889999987765333 32345688999999999999875


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=52.57  E-value=14  Score=23.51  Aligned_cols=25  Identities=24%  Similarity=0.308  Sum_probs=19.1

Q ss_pred             HHHHHHHhCchHHHHHHHHHHHHhc
Q 010727          316 WSMTNLMRNPATMKKAQEEVRSVAK  340 (502)
Q Consensus       316 ~~l~~L~~~p~~q~~lr~Ei~~~~~  340 (502)
                      -++.||..||++.+++.+.-.+.+|
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEec
Confidence            3578999999999999876444443


No 36 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=51.42  E-value=13  Score=28.23  Aligned_cols=15  Identities=13%  Similarity=0.434  Sum_probs=5.9

Q ss_pred             HHHHHHHHHhccCCC
Q 010727           12 LPISLLFLLRKHKKT   26 (502)
Q Consensus        12 ~~~~~~~~~~~~~~~   26 (502)
                      .+++++|+.++++++
T Consensus        80 ~Illi~y~irR~~Kk   94 (122)
T PF01102_consen   80 IILLISYCIRRLRKK   94 (122)
T ss_dssp             HHHHHHHHHHHHS--
T ss_pred             HHHHHHHHHHHHhcc
Confidence            344444544444433


No 37 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=44.91  E-value=9.5  Score=23.68  Aligned_cols=11  Identities=45%  Similarity=0.936  Sum_probs=9.2

Q ss_pred             eeccCCCCCCC
Q 010727          435 LPFGSGRRICP  445 (502)
Q Consensus       435 ~~Fg~G~~~C~  445 (502)
                      -+||-|+|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            47999999985


No 38 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=44.89  E-value=55  Score=23.02  Aligned_cols=19  Identities=16%  Similarity=0.338  Sum_probs=16.3

Q ss_pred             CchHHHHHHHHHHHHhcCC
Q 010727          324 NPATMKKAQEEVRSVAKNK  342 (502)
Q Consensus       324 ~p~~q~~lr~Ei~~~~~~~  342 (502)
                      .|++...+|+||.+++...
T Consensus        35 ~pd~l~~Lr~eIl~VI~KY   53 (88)
T COG0851          35 QPDYLEQLRKEILEVISKY   53 (88)
T ss_pred             CcchHHHHHHHHHHHHHHH
Confidence            4899999999999997654


No 39 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=42.87  E-value=70  Score=19.65  Aligned_cols=41  Identities=15%  Similarity=0.259  Sum_probs=25.9

Q ss_pred             HHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHH
Q 010727          295 IKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEV  335 (502)
Q Consensus       295 i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei  335 (502)
                      +...+..++-.|.|..+-.+.--|.+.--||+..+.+..|+
T Consensus         7 ~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    7 VLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            34444555556666666666666666666888888777765


No 40 
>PF09105 SelB-wing_1:  Elongation factor SelB, winged helix ;  InterPro: IPR015189 This entry represents a domain with a winged helix-type fold, which consists of a closed 3-helical bundle with a right-handed twist, and a small beta-sheet wing []. Different winged helix domains share a common structure, but can differ in sequence. This entry is designated "type 1".  The winged helix motif is involved in both DNA and RNA binding. In the elongation factor SelB, the winged helix domains recognise RNA, allowing the complex to wrap around the small ribosomal subunit. In bacteria, the incorporation of the amino acid selenocysteine into proteins requires elongation factor SelB, which binds both transfer RNA (tRNA) and mRNA. SelB binds to an mRNA hairpin formed by the selenocysteine insertion sequence (SECIS) with extremely high specificity []. ; PDB: 2V9V_A 1LVA_A 2PLY_A.
Probab=41.51  E-value=78  Score=18.98  Aligned_cols=44  Identities=23%  Similarity=0.345  Sum_probs=26.9

Q ss_pred             HHHHHHHHhhcCCCCCCCCCCcccHHHHHHHhhhcCcccccCCHHHHHHHHHHHHHhcccc
Q 010727          249 KFYQELVDEHLDPNRPKVDQQQEDIIDVLLRIRKNSETKIDLTWKHIKAVLMDVFVAGTDT  309 (502)
Q Consensus       249 ~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~t  309 (502)
                      +++.++|+++++.         -|+-..-.++        .++.++.+..+-.|..||+-|
T Consensus         5 kilaqiiqehreg---------ldwqeaatra--------slsleetrkllqsmaaagqvt   48 (61)
T PF09105_consen    5 KILAQIIQEHREG---------LDWQEAATRA--------SLSLEETRKLLQSMAAAGQVT   48 (61)
T ss_dssp             HHHHHHHHC-TT----------EEHHHHHHHH--------T--HHHHHHHHHHHHHTTSEE
T ss_pred             HHHHHHHHHHHcc---------CcHHHHHHHh--------hccHHHHHHHHHHHHhcCceE
Confidence            4556666666543         4554444443        478888888888888888765


No 41 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=37.64  E-value=54  Score=18.91  Aligned_cols=17  Identities=18%  Similarity=0.397  Sum_probs=11.5

Q ss_pred             HHHHHH-hCchHHHHHHH
Q 010727          317 SMTNLM-RNPATMKKAQE  333 (502)
Q Consensus       317 ~l~~L~-~~p~~q~~lr~  333 (502)
                      .+..++ +||++++.++.
T Consensus        18 lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   18 LLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHhChhHHHHHHh
Confidence            333444 79999888764


No 42 
>PF05545 FixQ:  Cbb3-type cytochrome oxidase component FixQ;  InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=36.71  E-value=52  Score=20.18  Aligned_cols=20  Identities=10%  Similarity=0.225  Sum_probs=10.6

Q ss_pred             HHHHHHHHHHHHHHHHhccC
Q 010727            5 LILILLSLPISLLFLLRKHK   24 (502)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~   24 (502)
                      ++++.++.++.++|.+++.+
T Consensus        15 ~v~~~~~F~gi~~w~~~~~~   34 (49)
T PF05545_consen   15 TVLFFVFFIGIVIWAYRPRN   34 (49)
T ss_pred             HHHHHHHHHHHHHHHHcccc
Confidence            34444455555566665543


No 43 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=35.77  E-value=1.6e+02  Score=20.81  Aligned_cols=50  Identities=16%  Similarity=0.090  Sum_probs=41.7

Q ss_pred             CHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHHhc
Q 010727          291 TWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAK  340 (502)
Q Consensus       291 ~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~  340 (502)
                      ............++-=+..++....-.+.+.++||+...++.+.+..-+.
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~   79 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE   79 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            44555566667788899999999999999999999999999999876654


No 44 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=34.07  E-value=29  Score=26.90  Aligned_cols=7  Identities=14%  Similarity=0.164  Sum_probs=2.7

Q ss_pred             CCCCCCC
Q 010727           25 KTFPPGP   31 (502)
Q Consensus        25 ~~~ppgP   31 (502)
                      +...|..
T Consensus        29 ~G~~P~~   35 (130)
T PF12273_consen   29 RGLQPIY   35 (130)
T ss_pred             cCCCCcC
Confidence            3344433


No 45 
>PRK06789 flagellar motor switch protein; Validated
Probab=32.20  E-value=48  Score=22.61  Aligned_cols=38  Identities=11%  Similarity=0.177  Sum_probs=30.5

Q ss_pred             HHHhhccCCCCC-CCCcccccc--ceecCeecCCCCEEEec
Q 010727          360 LKETFRLQPPVP-LIPRSTAEE--CVVDGYKIEAKTLAYVN  397 (502)
Q Consensus       360 i~E~lRl~~~~~-~~~R~~~~~--~~i~g~~ip~gt~v~~~  397 (502)
                      ++|-+.+.+... .+-|.+.++  +.++|..|.+|..|.++
T Consensus        22 i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         22 IEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             HHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            688999998877 677777766  44599999999988764


No 46 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=31.16  E-value=8.8  Score=36.07  Aligned_cols=64  Identities=13%  Similarity=0.141  Sum_probs=43.3

Q ss_pred             ChhHHHHHHHhhccCCCCCCCCccccccceecCeecCCCCEEE-----------echhhhcCCCCCCC-CCCCCCCC
Q 010727          353 LQYLKAVLKETFRLQPPVPLIPRSTAEECVVDGYKIEAKTLAY-----------VNTLAIGRDSEVWD-KPDEFIPE  417 (502)
Q Consensus       353 lp~l~a~i~E~lRl~~~~~~~~R~~~~~~~i~g~~ip~gt~v~-----------~~~~~~~~d~~~~~-~p~~F~P~  417 (502)
                      -..+.|||.|++-+.-... +.=+..+|+.++|..|||||.+.           +.+.++.++-.|+| +-..||-|
T Consensus       255 ~n~I~A~V~~~qtv~~G~~-vrlRLle~~~v~~~~ipkgt~l~g~~~~~g~R~~i~I~si~~~g~iipV~L~vyD~D  330 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGSA-VKLRLLEPIQAGDLVIPKGTVLYGTAKIQGERLDIKISSIEYNGTILPVELSVYDTD  330 (410)
T ss_pred             CCceEEEEcCceEEecCCE-EEEEEcCceeeCCEEecCCCEEEEEeeeccceEEEEEEEEEECCEEEEEEEEEEcCC
Confidence            4577889999988775333 32345688999999999999875           44455556656655 44455543


No 47 
>PF14991 MLANA:  Protein melan-A; PDB: 2GTZ_F 2GT9_F 3MRO_P 2GUO_C 3MRQ_P 2GTW_C 3L6F_C 3MRP_P.
Probab=30.75  E-value=17  Score=26.74  Aligned_cols=22  Identities=18%  Similarity=0.336  Sum_probs=0.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHhcc
Q 010727            2 AIELILILLSLPISLLFLLRKH   23 (502)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~   23 (502)
                      .|.+|++.+++++.+||.+++.
T Consensus        30 GiL~VILgiLLliGCWYckRRS   51 (118)
T PF14991_consen   30 GILIVILGILLLIGCWYCKRRS   51 (118)
T ss_dssp             S---------------------
T ss_pred             eeHHHHHHHHHHHhheeeeecc
Confidence            4556666666777776665554


No 48 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=29.02  E-value=55  Score=25.25  Aligned_cols=23  Identities=13%  Similarity=0.291  Sum_probs=17.2

Q ss_pred             CCCCchHHHHHHHHHHHHHHHhh
Q 010727          442 RICPGISMAMRTLELALANLLYK  464 (502)
Q Consensus       442 ~~C~G~~la~~~~~~~l~~ll~~  464 (502)
                      ..|.|+.||..++-.+|++|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            47999999999999999999975


No 49 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=28.96  E-value=86  Score=23.29  Aligned_cols=11  Identities=27%  Similarity=0.371  Sum_probs=7.4

Q ss_pred             CCccccccccC
Q 010727           33 GLPIIGNIHQY   43 (502)
Q Consensus        33 ~~p~~G~~~~~   43 (502)
                      .-|+.||+...
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            36788887543


No 50 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=28.63  E-value=38  Score=21.86  Aligned_cols=8  Identities=38%  Similarity=0.709  Sum_probs=6.0

Q ss_pred             CCCccCCC
Q 010727          415 IPERFMGT  422 (502)
Q Consensus       415 ~P~R~l~~  422 (502)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            78888864


No 51 
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=28.09  E-value=1.8e+02  Score=26.37  Aligned_cols=65  Identities=22%  Similarity=0.339  Sum_probs=48.2

Q ss_pred             cCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhCchHHHHHHHHHHHHhcCCCCCCcccc--cCChhHHHHHHHhhcc
Q 010727          289 DLTWKHIKAVLMDVFVAGTDTSVATLVWSMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDL--ETLQYLKAVLKETFRL  366 (502)
Q Consensus       289 ~l~~~~i~~~~~~~~~AG~~tt~~~l~~~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~~--~~lp~l~a~i~E~lRl  366 (502)
                      +=+++.|..++..+.+.|.                .|...+.|.++..-.+-.++.++...+  .++.|.-..|.|+.|-
T Consensus       342 PGtWDHI~~QiGMFSyTGL----------------tp~qV~~li~~h~vyLl~~GRInisGLN~~NveyVAkAIde~Vr~  405 (410)
T KOG1412|consen  342 PGTWDHITQQIGMFSYTGL----------------TPAQVDHLIENHKVYLLSDGRINISGLNMKNVEYVAKAIDETVRA  405 (410)
T ss_pred             CCcHHHHHhhccceeecCC----------------CHHHHHHHHHhceEEEecCCcEeeeccccccHHHHHHHHHHHHHh
Confidence            3488999999998888886                345566666665555555666666554  5899999999999997


Q ss_pred             CCC
Q 010727          367 QPP  369 (502)
Q Consensus       367 ~~~  369 (502)
                      .+.
T Consensus       406 ~~~  408 (410)
T KOG1412|consen  406 IKS  408 (410)
T ss_pred             hcc
Confidence            653


No 52 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=27.48  E-value=64  Score=20.30  Aligned_cols=18  Identities=17%  Similarity=0.287  Sum_probs=15.4

Q ss_pred             hCCcEEEEecCcCEEEec
Q 010727           59 YGPLMYLRFGSLPTLIIS   76 (502)
Q Consensus        59 yG~v~~~~~~~~~~v~v~   76 (502)
                      -|++++++-||+.++|..
T Consensus         3 ~GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    3 IGDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCCEEEEccCCCCeEEEE
Confidence            489999999999988873


No 53 
>PHA03162 hypothetical protein; Provisional
Probab=27.28  E-value=47  Score=25.26  Aligned_cols=24  Identities=29%  Similarity=0.570  Sum_probs=19.6

Q ss_pred             cCCCCCCCchHHHHHHHHHHHHHH
Q 010727          438 GSGRRICPGISMAMRTLELALANL  461 (502)
Q Consensus       438 g~G~~~C~G~~la~~~~~~~l~~l  461 (502)
                      ++|++.|||+...+-++..=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            469999999999888877666655


No 54 
>PF15102 TMEM154:  TMEM154 protein family
Probab=26.96  E-value=57  Score=25.60  Aligned_cols=7  Identities=43%  Similarity=0.771  Sum_probs=3.2

Q ss_pred             hHHHHHH
Q 010727            2 AIELILI    8 (502)
Q Consensus         2 ~~~~~~~    8 (502)
                      +|+++++
T Consensus        62 lIP~VLL   68 (146)
T PF15102_consen   62 LIPLVLL   68 (146)
T ss_pred             eHHHHHH
Confidence            4554443


No 55 
>PF10777 YlaC:  Inner membrane protein YlaC;  InterPro: IPR019713  The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis []. 
Probab=26.93  E-value=48  Score=25.94  Aligned_cols=39  Identities=15%  Similarity=0.409  Sum_probs=31.6

Q ss_pred             HHHHHHhCchHHHHHHHHHHHHhcCCCCCCcccccCChh
Q 010727          317 SMTNLMRNPATMKKAQEEVRSVAKNKGFVDEDDLETLQY  355 (502)
Q Consensus       317 ~l~~L~~~p~~q~~lr~Ei~~~~~~~~~~~~~~~~~lp~  355 (502)
                      ++-.++++|++-+.++++|++.+...+.++.-|+-.|.|
T Consensus       114 ai~~iL~~p~V~~~~K~~i~~i~~~Kgei~FYDVy~la~  152 (155)
T PF10777_consen  114 AIDKILQSPQVPDEIKQGIQRIISTKGEISFYDVYSLAY  152 (155)
T ss_pred             HHHHHHcCCCCCHHHHHHHHHHHHhCCceeEEEeEEeec
Confidence            344578899999999999999999888888877665554


No 56 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=25.93  E-value=1.8e+02  Score=28.14  Aligned_cols=26  Identities=8%  Similarity=0.170  Sum_probs=14.6

Q ss_pred             hhCCcEEEEecCcCEEE-ecCHHHHHH
Q 010727           58 KYGPLMYLRFGSLPTLI-ISSAKMAKE   83 (502)
Q Consensus        58 kyG~v~~~~~~~~~~v~-v~d~~~i~~   83 (502)
                      +||.|++-.+-++.+-| +..++.-+.
T Consensus       222 rfg~V~KaqL~~~~VAVKifp~~~kqs  248 (534)
T KOG3653|consen  222 RFGCVWKAQLDNRLVAVKIFPEQEKQS  248 (534)
T ss_pred             ccceeehhhccCceeEEEecCHHHHHH
Confidence            68888877666654433 334444333


No 57 
>PRK09458 pspB phage shock protein B; Provisional
Probab=25.92  E-value=1.2e+02  Score=20.72  Aligned_cols=18  Identities=33%  Similarity=0.458  Sum_probs=8.1

Q ss_pred             hHHHHHHHHHHHHHHHHH
Q 010727            2 AIELILILLSLPISLLFL   19 (502)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~   19 (502)
                      +++++++++.+....+++
T Consensus         7 ~~PliiF~ifVaPiWL~L   24 (75)
T PRK09458          7 AIPLTIFVLFVAPIWLWL   24 (75)
T ss_pred             HHhHHHHHHHHHHHHHHH
Confidence            344455555444444333


No 58 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=25.30  E-value=1.4e+02  Score=23.00  Aligned_cols=39  Identities=10%  Similarity=0.199  Sum_probs=29.1

Q ss_pred             CchHHHHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHhC
Q 010727           48 PPRYLWELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRTN   88 (502)
Q Consensus        48 ~~~~~~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~~   88 (502)
                      ....+++|.++||.+--.  .+...+...|++.++++...+
T Consensus        76 v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   76 VEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            356788999999975432  245677788999999998754


No 59 
>PF15102 TMEM154:  TMEM154 protein family
Probab=25.11  E-value=37  Score=26.59  Aligned_cols=17  Identities=29%  Similarity=0.606  Sum_probs=7.3

Q ss_pred             HHHHHHHHHHHHHHHHH
Q 010727            3 IELILILLSLPISLLFL   19 (502)
Q Consensus         3 ~~~~~~~~~~~~~~~~~   19 (502)
                      +.++++++++++++.+.
T Consensus        66 VLLvlLLl~vV~lv~~~   82 (146)
T PF15102_consen   66 VLLVLLLLSVVCLVIYY   82 (146)
T ss_pred             HHHHHHHHHHHHheeEE
Confidence            34444444444333333


No 60 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=23.99  E-value=50  Score=23.14  Aligned_cols=20  Identities=20%  Similarity=0.496  Sum_probs=17.4

Q ss_pred             HHHHHHHHHHHhhceeecCC
Q 010727          452 RTLELALANLLYKFDWKMPD  471 (502)
Q Consensus       452 ~~~~~~l~~ll~~f~~~~~~  471 (502)
                      .-++-++..+|..|||.+.+
T Consensus        60 ~~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHHhccCCceeee
Confidence            34788999999999999976


No 61 
>PRK13989 cell division topological specificity factor MinE; Provisional
Probab=22.51  E-value=66  Score=22.61  Aligned_cols=20  Identities=20%  Similarity=0.195  Sum_probs=16.4

Q ss_pred             CchHHHHHHHHHHHHhcCCC
Q 010727          324 NPATMKKAQEEVRSVAKNKG  343 (502)
Q Consensus       324 ~p~~q~~lr~Ei~~~~~~~~  343 (502)
                      .|+..+.+++||.+++...-
T Consensus        36 ~p~~l~~lk~dil~VIsKYv   55 (84)
T PRK13989         36 PPDYLPALQKELVAVISKYV   55 (84)
T ss_pred             CHHHHHHHHHHHHHHHHHhe
Confidence            58889999999999887643


No 62 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=22.48  E-value=52  Score=21.77  Aligned_cols=16  Identities=25%  Similarity=0.563  Sum_probs=12.9

Q ss_pred             CChhHHHHHHHhhccC
Q 010727          352 TLQYLKAVLKETFRLQ  367 (502)
Q Consensus       352 ~lp~l~a~i~E~lRl~  367 (502)
                      +..+++.+|+|++|+.
T Consensus        39 r~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen   39 RKQFVEMIIKEAARFK   54 (65)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            3458899999999974


No 63 
>PRK13990 cell division topological specificity factor MinE; Provisional
Probab=22.37  E-value=69  Score=22.83  Aligned_cols=24  Identities=17%  Similarity=0.224  Sum_probs=17.7

Q ss_pred             CchHHHHHHHHHHHHhcCCCCCCc
Q 010727          324 NPATMKKAQEEVRSVAKNKGFVDE  347 (502)
Q Consensus       324 ~p~~q~~lr~Ei~~~~~~~~~~~~  347 (502)
                      .|++++.+++||.+++...-.++.
T Consensus        41 ~pd~L~~lk~eIl~VI~KYv~Id~   64 (90)
T PRK13990         41 SSHLLAELKDEIIEVVKKYVALSE   64 (90)
T ss_pred             CHHHHHHHHHHHHHHHHHheecCh
Confidence            368899999999998876443433


No 64 
>TIGR02976 phageshock_pspB phage shock protein B. This model describes the PspB protein of the psp (phage shock protein) operon, as found in Escherichia coli and many related species. Expression of a phage protein called secretin protein IV, and a number of other stresses including ethanol, heat shock, and defects in protein secretion trigger sigma-54-dependent expression of the phage shock regulon. PspB is both a regulator and an effector protein of the phage shock response.
Probab=22.21  E-value=1.1e+02  Score=20.90  Aligned_cols=9  Identities=33%  Similarity=0.634  Sum_probs=4.0

Q ss_pred             HHHHHHHHH
Q 010727            3 IELILILLS   11 (502)
Q Consensus         3 ~~~~~~~~~   11 (502)
                      +++++++++
T Consensus         8 ~Pliif~if   16 (75)
T TIGR02976         8 IPLIIFVIF   16 (75)
T ss_pred             HHHHHHHHH
Confidence            444444443


No 65 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=21.87  E-value=2.1e+02  Score=17.68  Aligned_cols=35  Identities=17%  Similarity=0.292  Sum_probs=24.2

Q ss_pred             HHHHHHhhCCcEEEEecCc----CEEEecCHHHHHHHHH
Q 010727           52 LWELSKKYGPLMYLRFGSL----PTLIISSAKMAKEVMR   86 (502)
Q Consensus        52 ~~~~~~kyG~v~~~~~~~~----~~v~v~d~~~i~~i~~   86 (502)
                      +.+..++||+|.++.+...    -.|-..+.+.++....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            3567789999988875443    3555568888888875


No 66 
>PF05261 Tra_M:  TraM protein, DNA-binding;  InterPro: IPR007925 The TraM protein is an essential part of the DNA transfer machinery of the conjugative resistance plasmid R1 (IncFII). On the basis of mutational analyses, it was shown that the essential transfer protein TraM has at least two functions. First, a functional TraM protein was found to be required for normal levels of transfer gene expression. Second, experimental evidence was obtained that TraM stimulates efficient site-specific single-stranded DNA cleavage at the oriT, in vivo. Furthermore, a specific interaction of the cytoplasmic TraM protein with the membrane protein TraD was demonstrated, suggesting that the TraM protein creates a physical link between the relaxosomal nucleoprotein complex and the membrane-bound DNA transfer apparatus [].; GO: 0003677 DNA binding, 0000746 conjugation; PDB: 3ON0_A 3OMY_B 1DP3_A 2G9E_A 3D8A_B 2G7O_A.
Probab=20.95  E-value=3.9e+02  Score=20.46  Aligned_cols=70  Identities=13%  Similarity=0.135  Sum_probs=37.6

Q ss_pred             hHHHHHHHHHHhhcCCCCCCCCCCcccHHHHHHHh------hhcCcccccCCHHHHHHHHHHHHHhcccchHHHHH
Q 010727          246 DSDKFYQELVDEHLDPNRPKVDQQQEDIIDVLLRI------RKNSETKIDLTWKHIKAVLMDVFVAGTDTSVATLV  315 (502)
Q Consensus       246 ~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~------~~~~~~~~~l~~~~i~~~~~~~~~AG~~tt~~~l~  315 (502)
                      ...+-+..++++++++.....+-.-.+..+.|++.      .+.+.++.+++.++....++.-..-...+++..|.
T Consensus        11 ~v~~~I~~iVe~r~qeGA~~~dvs~SSv~smLlELGLrVY~~Q~E~k~s~Fnq~eFnk~lLe~v~kt~~~~~~ILg   86 (127)
T PF05261_consen   11 KVLEEINDIVEERRQEGATEKDVSFSSVSSMLLELGLRVYEAQMERKESGFNQEEFNKVLLENVSKTRFTVSKILG   86 (127)
T ss_dssp             CHHHHHHHHHHHHHCCT-TTTT--HHHHHHHHHHCCCCHHHHCCHHCSSS--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHhHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44556778888888775543222224566777762      11111235788888777777666655555555443


No 67 
>PHA03049 IMV membrane protein; Provisional
Probab=20.51  E-value=1.6e+02  Score=19.43  Aligned_cols=12  Identities=17%  Similarity=0.421  Sum_probs=4.9

Q ss_pred             CCCCCCCccccc
Q 010727           28 PPGPPGLPIIGN   39 (502)
Q Consensus        28 ppgP~~~p~~G~   39 (502)
                      ||.|...+-.-+
T Consensus        33 ~p~~e~ye~~e~   44 (68)
T PHA03049         33 PPSQEKYEKMED   44 (68)
T ss_pred             CCChhhccCchh
Confidence            444443444433


No 68 
>PF04689 S1FA:  DNA binding protein S1FA;  InterPro: IPR006779  S1FA is an unusual small plant peptide of only 70 amino acids with a basic domain which contains a nuclear localization signal and a putative DNA binding helix. S1FA is highly conserved between dicotyledonous and monocotyledonous plants and may be a DNA-binding protein that specifically recognises the negative promoter element S1F [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=20.37  E-value=1.1e+02  Score=19.84  Aligned_cols=15  Identities=33%  Similarity=0.474  Sum_probs=7.7

Q ss_pred             HHHhccCCCCCCCCC
Q 010727           18 FLLRKHKKTFPPGPP   32 (502)
Q Consensus        18 ~~~~~~~~~~ppgP~   32 (502)
                      .+|-.+.+.+||-.+
T Consensus        33 vlY~Yaqk~lpp~kk   47 (69)
T PF04689_consen   33 VLYVYAQKTLPPKKK   47 (69)
T ss_pred             HHHHHHhhcCCCCCC
Confidence            344445555665543


No 69 
>KOG4189 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.28  E-value=5.2e+02  Score=21.63  Aligned_cols=48  Identities=17%  Similarity=0.203  Sum_probs=36.6

Q ss_pred             CHHHHHHHHHHHHHhcccchH--HHHHHHHHHHHhCchHHHHHHHHHHHH
Q 010727          291 TWKHIKAVLMDVFVAGTDTSV--ATLVWSMTNLMRNPATMKKAQEEVRSV  338 (502)
Q Consensus       291 ~~~~i~~~~~~~~~AG~~tt~--~~l~~~l~~L~~~p~~q~~lr~Ei~~~  338 (502)
                      +..++...+.+=.+|-+++=+  .+...++|-|-+.|+.+.+|+++++.+
T Consensus       129 s~~diakesYd~~lakhHsW~IRtAV~~amYtLPTR~~lL~~Lk~d~~~~  178 (209)
T KOG4189|consen  129 SLKDIAKESYDKTLAKHHSWAIRTAVAAAMYTLPTRPELLCRLKEDMDAA  178 (209)
T ss_pred             hhhHHHHHHHHHhhhccccHHHHHHHHHHHHhCCCcHHHHHHHHhHHHHH
Confidence            445666666666677777644  467788999999999999999999765


No 70 
>PRK02302 hypothetical protein; Provisional
Probab=20.01  E-value=2.1e+02  Score=20.40  Aligned_cols=35  Identities=14%  Similarity=0.164  Sum_probs=26.0

Q ss_pred             HHHHHhhCCcEEEEecCcCEEEecCHHHHHHHHHh
Q 010727           53 WELSKKYGPLMYLRFGSLPTLIISSAKMAKEVMRT   87 (502)
Q Consensus        53 ~~~~~kyG~v~~~~~~~~~~v~v~d~~~i~~i~~~   87 (502)
                      .+.-++||+|..+.--..-.++=.|.+.+.++..+
T Consensus        20 ~r~LrkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k   54 (89)
T PRK02302         20 ARKLSKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE   54 (89)
T ss_pred             HHHHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            34456899999886555667777788888888753


Done!