Your job contains 1 sequence.
>010728
MAEKFWTKEEDKAMVESVLGTEACEFLIKSTANNVMAELVTPPGDLGVHQRLCQVVEGSN
WNYAIYWHASNLKSGGSALIWGDGHCRDPKDGAVGGGKSSGVNKVDEVERKEEVKKRVLQ
KLHACFGGLENYASRFDGVSGVEMFYLTSMYFNFRCDSAYGPGHAYKSGRSIWTSGIVSC
SDHYESRSFLAMSAGFQTVVFVPAKSGVVELGSVKLIPEEQNVVEMVKTVFEGSSSVQTK
VFPKIFGHELSLGGSKSQSISINFSPKVEDELNFASDSYEIQAIGSNQVYGNSSNRCRSE
DEAKLFPHLNQMIVGGFDAQARVSSLEQKDDSSPQGDDRKPRKRGRKPANGREEPLNHVE
AERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMSNNKQ
KQISVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVSTTEDKVIHTF
SIQTQSGASEQLKEKLLAALSK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010728
(502 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 728 1.7e-126 2
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 434 6.6e-79 2
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 411 3.6e-78 2
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 297 1.1e-43 3
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 283 5.4e-41 3
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 290 9.6e-40 4
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 275 1.5e-38 3
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 323 3.2e-32 2
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 214 4.8e-27 3
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 186 7.2e-25 3
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 174 1.7e-24 3
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 162 1.4e-23 3
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 148 2.9e-21 3
TAIR|locus:2127023 - symbol:ATMYC1 species:3702 "Arabidop... 217 1.4e-18 3
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 154 6.3e-16 3
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 196 7.3e-15 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 173 9.1e-14 3
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 180 1.3e-12 2
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 180 1.6e-11 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 180 2.3e-11 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 176 8.3e-11 2
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 178 2.2e-10 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 162 2.4e-10 2
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 147 7.4e-10 2
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 172 7.7e-10 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 169 8.1e-10 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 174 8.7e-10 2
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 155 1.0e-09 2
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 144 1.4e-09 2
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 162 1.9e-09 2
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 155 4.5e-09 2
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 150 5.9e-09 2
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 156 8.2e-09 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 156 1.3e-08 2
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 156 1.7e-08 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 158 1.8e-08 2
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 157 2.7e-08 1
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 154 4.2e-08 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 153 5.9e-08 1
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 142 7.4e-08 1
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 149 1.1e-07 1
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 143 1.7e-07 1
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 150 1.8e-07 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 145 2.4e-07 1
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species... 141 4.2e-07 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 133 1.4e-06 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 127 1.8e-06 1
UNIPROTKB|Q7F7Z2 - symbol:Os01g0159800 "ESTs C26093(C1162... 134 3.0e-06 1
UNIPROTKB|Q7X8R0 - symbol:OSJNBa0083N12.3 "OSJNBa0083N12.... 138 4.0e-06 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 132 7.6e-06 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 132 8.4e-06 1
UNIPROTKB|Q5SMX2 - symbol:P0498B01.25 "Basic helix-loop-h... 131 9.2e-06 2
UNIPROTKB|Q69MD0 - symbol:OSJNBb0019B14.23 "BHLH-like pro... 127 9.3e-06 1
UNIPROTKB|Q5N9E6 - symbol:P0505D12.13 "BHLH transcription... 90 1.6e-05 3
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 131 1.8e-05 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 128 2.4e-05 1
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 130 2.5e-05 1
UNIPROTKB|Q6ZJC8 - symbol:OJ1666_A04.16 "Os08g0477900 pro... 124 2.5e-05 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 130 2.7e-05 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 130 2.8e-05 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 131 2.8e-05 1
UNIPROTKB|Q75IR0 - symbol:OSJNBb0099P06.13 "Putative unch... 125 3.7e-05 1
TAIR|locus:504956068 - symbol:AT2G31215 "AT2G31215" speci... 106 4.1e-05 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 128 4.2e-05 1
TAIR|locus:2152262 - symbol:BIM3 "AT5G38860" species:3702... 125 4.7e-05 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 125 5.0e-05 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 127 5.0e-05 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 129 5.3e-05 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 124 6.0e-05 1
UNIPROTKB|Q5SMX4 - symbol:P0498B01.36 "cDNA clone:J033115... 128 6.2e-05 2
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37... 125 6.3e-05 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 125 7.4e-05 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 124 8.4e-05 1
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 109 8.6e-05 2
TAIR|locus:2103560 - symbol:AT3G56770 "AT3G56770" species... 119 0.00011 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 126 0.00011 2
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 117 0.00011 1
TAIR|locus:2164605 - symbol:AT5G56960 "AT5G56960" species... 124 0.00014 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 124 0.00014 1
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 122 0.00015 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 120 0.00017 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 120 0.00017 1
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 121 0.00020 2
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 116 0.00022 1
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 120 0.00026 1
UNIPROTKB|Q6Z339 - symbol:B1121A12.20 "Os02g0726700 prote... 119 0.00029 1
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 115 0.00031 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 112 0.00036 1
UNIPROTKB|Q8S0C6 - symbol:B1112D09.6 "Uncharacterized pro... 123 0.00039 2
UNIPROTKB|Q6ZBQ2 - symbol:P0605H02.26 "BHLH protein famil... 120 0.00044 1
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 118 0.00053 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 119 0.00059 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 115 0.00060 1
UNIPROTKB|Q653A4 - symbol:OSJNBa0043B22.14 "Basic helix-l... 117 0.00063 1
UNIPROTKB|Q6ZA99 - symbol:P0431A03.9 "Os08g0432800 protei... 116 0.00064 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 115 0.00065 1
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 101 0.00068 2
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 116 0.00070 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 116 0.00073 2
TAIR|locus:2042486 - symbol:AT2G31220 "AT2G31220" species... 117 0.00080 1
WARNING: Descriptions of 3 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 728 (261.3 bits), Expect = 1.7e-126, Sum P(2) = 1.7e-126
Identities = 150/298 (50%), Positives = 198/298 (66%)
Query: 1 MAEKFWTKEEDKAMVESVLGTEACEFLIK--STANNVMAELVTPPGDLGVHQRLCQVVEG 58
M +KFW +ED+AMVES +G+EAC+F I S +N +++LV+PP D + Q L VVEG
Sbjct: 1 MGQKFWENQEDRAMVESTIGSEACDFFISTASASNTALSKLVSPPSDSNLQQGLRHVVEG 60
Query: 59 SNWNYAIYWHASNLKSG-GSALIWGDGHCRDPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 117
S+W+YA++W ASN+ S G LIWGDGHCR
Sbjct: 61 SDWDYALFWLASNVNSSDGCVLIWGDGHCR-----------VKKGASGEDYSQQDEIKRR 109
Query: 118 XLQKLHACF-GGLENYASRFDG-VSGVEMFYLTSMYFNFRCDS-AYGPGHAYKSGRSIWT 174
L+KLH F G E++ G ++ ++MFYL S+YF+FRCD+ YGP Y SG+ +W
Sbjct: 110 VLRKLHLSFVGSDEDHRLVKSGALTDLDMFYLASLYFSFRCDTNKYGPAGTYVSGKPLWA 169
Query: 175 SGIVSCSDHYESRSFLAMSAGFQTVVFVPAKSGVVELGSVKLIPEEQNVVEMVKTVFEGS 234
+ + SC +Y RSFLA SAGFQTV+ VP SGVVELGS++ IPE+++V+EMVK+VF GS
Sbjct: 170 ADLPSCLSYYRVRSFLARSAGFQTVLSVPVNSGVVELGSLRHIPEDKSVIEMVKSVFGGS 229
Query: 235 SSVQTKVFPKIFGHELSLGGSKSQSISINFSPKVEDELNFASDSYEIQAIG-SNQVYG 291
VQ K PKIFG +LSLGG+K +S+SINFSPK ED+ F+ +SYE+QAIG SNQVYG
Sbjct: 230 DFVQAKEAPKIFGRQLSLGGAKPRSMSINFSPKTEDDTGFSLESYEVQAIGGSNQVYG 287
Score = 535 (193.4 bits), Expect = 1.7e-126, Sum P(2) = 1.7e-126
Identities = 105/156 (67%), Positives = 130/156 (83%)
Query: 349 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRV 408
ANGREE LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLL DAITYITD+Q KIRV
Sbjct: 312 ANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRV 371
Query: 409 LETEKD-MSNNKQKQISVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQES 467
ETEK M + QI+ E+D+Q RH+DAVVR+SCPL+ HPVS V++T E++++ +S
Sbjct: 372 YETEKQIMKRRESNQITPAEVDYQQRHDDAVVRLSCPLETHPVSKVIQTLRENEVMPHDS 431
Query: 468 NVSTTEDKVIHTFSIQTQSGAS-EQLKEKLLAALSK 502
NV+ TE+ V+HTF+++ Q G + EQLK+KLLA+LS+
Sbjct: 432 NVAITEEGVVHTFTLRPQGGCTAEQLKDKLLASLSQ 467
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 434 (157.8 bits), Expect = 6.6e-79, Sum P(2) = 6.6e-79
Identities = 88/157 (56%), Positives = 114/157 (72%)
Query: 349 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRV 408
ANGREEPLNHVEAERQRREKLNQRFYALR+VVPNISKMDKASLLGDAI+YI +LQ K+++
Sbjct: 387 ANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKI 446
Query: 409 LETEK---DMSNNKQKQISV---PEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQI 462
+E E+ D S ++ I+V PE+D Q +E+ VVRV PLD HP S +++ +
Sbjct: 447 MEDERVGTDKSLSESNTITVEESPEVDIQAMNEEVVVRVISPLDSHPASRIIQAMRNSNV 506
Query: 463 VAQESNVSTTEDKVIHTFSIQTQSGASEQLKEKLLAA 499
E+ +S ED + HTF I++ +G+ KEKL+AA
Sbjct: 507 SLMEAKLSLAEDTMFHTFVIKSNNGSDPLTKEKLIAA 543
Score = 378 (138.1 bits), Expect = 6.6e-79, Sum P(2) = 6.6e-79
Identities = 106/331 (32%), Positives = 161/331 (48%)
Query: 1 MAEKFWTKEEDKAMVESVLGTEACEFLIKSTANNVMAELVTPPGDLGVHQRLCQVVEGSN 60
M++ W +EDK++V +VLG A +FL ++ +N LV D ++++L +V+ N
Sbjct: 3 MSDLGWD-DEDKSVVSAVLGHLASDFLRANSNSNQNLFLVMGTDDT-LNKKLSSLVDWPN 60
Query: 61 -----WNYAIYWHASNLKSGGSALIWGDGHCRDPXXXXXXXXXXXXXXXXXXXXXXX--X 113
WNYAI+W + +SG L WGDG CR+P
Sbjct: 61 SENFSWNYAIFWQQTMSRSGQQVLGWGDGCCREPNEEEESKVVRSYNFNNMGAEEETWQD 120
Query: 114 XXXXXLQKLHACFGGLE--NYASRFDGVSGVEMFYLTSMYFNFRCDSAYGPGHAYKSGRS 171
LQKLH FGG + NYA + V+ E+F+L SMYF F GPG Y SG+
Sbjct: 121 MRKRVLQKLHRLFGGSDEDNYALSLEKVTATEIFFLASMYFFFNHGEG-GPGRCYSSGKH 179
Query: 172 IWTSGIVSCSDHYESRSFLAMSAGFQTVVFVPAKSGVVELGSVKLIPEEQNVVEMVKTVF 231
+W S V+ Y RSF+A SAG +T+V VP +GV+ELGSV +PE +V+ V+ +F
Sbjct: 180 VWLSDAVNSESDYCFRSFMAKSAGIRTIVMVPTDAGVLELGSVWSLPENIGLVKSVQALF 239
Query: 232 EG---------SSSVQTKVFPKIFGHELSLGGSKSQSISINFSPKVEDELNFASDSYEIQ 282
S++ T K+FG +LS + + + + + DE F S+E
Sbjct: 240 MRRVTQPVMVTSNTNMTGGIHKLFGQDLSGAHAYPKKLEVR---RNLDE-RFTPQSWE-- 293
Query: 283 AIGSNQVYGNSSNRCRSEDEAKLFPHLNQMI 313
G N G + D+ K+ ++N ++
Sbjct: 294 --GYNNNKGPTFGYTPQRDDVKVLENVNMVV 322
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 411 (149.7 bits), Expect = 3.6e-78, Sum P(2) = 3.6e-78
Identities = 82/156 (52%), Positives = 113/156 (72%)
Query: 349 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRV 408
ANGR E LNHVEAERQRREKLNQRFYALR+VVPNISKMDKASLLGDA++YI +L K++V
Sbjct: 425 ANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKV 484
Query: 409 LETEKD-MSNNKQKQISVP-EIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQE 466
+E E++ + + IS+ +I+ Q ED VR++CPL+ HP S + F E ++
Sbjct: 485 MEAERERLGYSSNPPISLDSDINVQTSGEDVTVRINCPLESHPASRIFHAFEESKVEVIN 544
Query: 467 SNVSTTEDKVIHTFSIQTQSGASEQLKEKLLAALSK 502
SN+ ++D V+HTF ++++ E KEKL++ALS+
Sbjct: 545 SNLEVSQDTVLHTFVVKSE----ELTKEKLISALSR 576
Score = 394 (143.8 bits), Expect = 3.6e-78, Sum P(2) = 3.6e-78
Identities = 91/236 (38%), Positives = 124/236 (52%)
Query: 6 WTKEEDKAMVESVLGTEACEFLIKSTANNVMAELVTPPGDLGVHQRLCQVVEGSN----- 60
W E+DKA+V S+LG A ++L+ ++ +N L+T D + +L +VE N
Sbjct: 8 WN-EDDKAIVASLLGKRALDYLLSNSVSNANL-LMTLGSDENLQNKLSDLVERPNASNFS 65
Query: 61 WNYAIYWHASNLKSGGSALIWGDGHCRDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQ 120
WNYAI+W S K+G L WGDG+CR+P LQ
Sbjct: 66 WNYAIFWQISRSKAGDLVLCWGDGYCREPKEGEKSEIVRILSMGREEETHQTMRKRV-LQ 124
Query: 121 KLHACFGGLE--NYASRFDGVSGVEMFYLTSMYFNFRCDSAYGPGHAYKSGRSIWTSGIV 178
KLH FGG E N A D V+ EMF L+SMYF+F GPG + S + +W S +V
Sbjct: 125 KLHDLFGGSEEENCALGLDRVTDTEMFLLSSMYFSFPRGEG-GPGKCFASAKPVWLSDVV 183
Query: 179 SCSDHYESRSFLAMSAGFQTVVFVPAKSGVVELGSVKLIPEEQNVVEMVKTVFEGS 234
+ Y RSFLA SAG QTVV VP GVVELGS +PE ++ + ++++F S
Sbjct: 184 NSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELGSTSCLPESEDSILSIRSLFTSS 239
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 297 (109.6 bits), Expect = 1.1e-43, Sum P(3) = 1.1e-43
Identities = 88/225 (39%), Positives = 114/225 (50%)
Query: 204 AKSGVVELGSVKLIPEEQNVVEMVKTVFEGSSSVQTKVFPKIFGHELSLGGSKSQSISIN 263
+KS E GS I E N+ V S Q F F EL+ S S +
Sbjct: 306 SKSIQFENGSSSTITENPNLDPTPSPVH---SQTQNPKFNNTFSRELNFSTSSSTLVK-- 360
Query: 264 FSPKVEDELNFASDSYEIQAIGSNQVYGNSSNRCRSEDEAKLFPHLNQMIVGGF-DAQAR 322
P+ + LNF + + N + S + + E++ K LN+ V F D A
Sbjct: 361 --PRSGEILNFGDEG---KRSSGNPDPSSYSGQTQFENKRKRSMVLNEDKVLSFGDKTAG 415
Query: 323 VSSLEQKDDSSPQXXXXXXXXXXXXX--ANGREEPLNHVEAERQRREKLNQRFYALRAVV 380
S + S + ANGREEPLNHVEAERQRREKLNQRFYALRAVV
Sbjct: 416 ESDHSDLEASVVKEVAVEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVV 475
Query: 381 PNISKMDKASLLGDAITYITDLQMKIRVLETEKDMSNNKQKQISV 425
PN+SKMDKASLLGDAI YI +L+ K+ E+EK N+ +++ +
Sbjct: 476 PNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIKNQLEEVKL 520
Score = 198 (74.8 bits), Expect = 1.1e-43, Sum P(3) = 1.1e-43
Identities = 63/243 (25%), Positives = 106/243 (43%)
Query: 6 WTKEEDKAMVESVLGTEACEFL---IKSTANNVMAELV-TP----PGDLG-----VHQRL 52
WT +++ +M+E+ + + L +T E TP P G + QRL
Sbjct: 13 WTTDDNASMMEAFMSSSDISTLWPPASTTTTTATTETTPTPAMEIPAQAGFNQETLQQRL 72
Query: 53 CQVVEGSN--WNYAIYWHASNLKSGGSALIWGDGHCRDPXXXXXXXXXXXXXXXXXXXXX 110
++EG++ W YAI+W S SG S L WGDG+ +
Sbjct: 73 QALIEGTHEGWTYAIFWQPSYDFSGASVLGWGDGYYKGEEDKANPRRRSSSPPFSTPADQ 132
Query: 111 XXXXXXXXLQKLHACF-GGLENYASRFDG-VSGVEMFYLTSMYFNFRCDSAYGPGHAYKS 168
L++L++ GG+ D V+ E F+L SM +F C + G A+ +
Sbjct: 133 EYRKKV--LRELNSLISGGVAPSDDAVDEEVTDTEWFFLVSMTQSFACGAGLA-GKAFAT 189
Query: 169 GRSIWTSGIVSCSDHYESRSFLAMSAGFQTVVFVPAKSGVVELGSVKLIPEEQNVVEMVK 228
G ++W SG S R+ G T+ +P+ +GVVE+GS + I + +++ V+
Sbjct: 190 GNAVWVSGSDQLSGSGCERAKQGGVFGMHTIACIPSANGVVEVGSTEPIRQSSDLINKVR 249
Query: 229 TVF 231
+F
Sbjct: 250 ILF 252
Score = 66 (28.3 bits), Expect = 1.1e-43, Sum P(3) = 1.1e-43
Identities = 20/91 (21%), Positives = 46/91 (50%)
Query: 414 DMSNNKQ--KQISVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVST 471
DMS++ K + + EI+ + DA++RV +HP + +M + ++ +++S
Sbjct: 533 DMSSSCSSIKPVGM-EIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSV 591
Query: 472 TEDKVIHTFSIQT--QSGASEQLKEKLLAAL 500
D +I +++ + EQL+ L++ +
Sbjct: 592 VNDLMIQQATVKMGFRIYTQEQLRASLISKI 622
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 283 (104.7 bits), Expect = 5.4e-41, Sum P(3) = 5.4e-41
Identities = 57/77 (74%), Positives = 68/77 (88%)
Query: 349 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRV 408
ANGREEPLNHVEAERQRREKLNQRFY+LRAVVPN+SKMDKASLLGDAI+YI++L+ K++
Sbjct: 408 ANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQK 467
Query: 409 LETEKDMSNNKQKQISV 425
E++K+ QKQI V
Sbjct: 468 AESDKE---ELQKQIDV 481
Score = 177 (67.4 bits), Expect = 5.4e-41, Sum P(3) = 5.4e-41
Identities = 60/239 (25%), Positives = 107/239 (44%)
Query: 6 WTKEEDKAMVESVLGTEACEFLIKSTANNVMAELVTPP----GDLGVHQRLCQVVEGSN- 60
W+ ++D +++E+ +G S +++ L PP + + QRL ++EG+N
Sbjct: 24 WSTDDDASVMEAFIGGG-------SDHSSLFPPLPPPPLPQVNEDNLQQRLQALIEGANE 76
Query: 61 -WNYAIYWHASNLKSG------GSALI-WGDGHCRDPXXXXXXXXXXXXXXXXXXXXXXX 112
W YA++W +S+ +G + L+ WGDG+ +
Sbjct: 77 NWTYAVFWQSSHGFAGEDNNNNNTVLLGWGDGYYKGEEEKSRKKKSNPASAAEQEHRKRV 136
Query: 113 XXXXXXLQKLHACFGGLENYASRFDGVSGVEMFYLTSMYFNFRCDSAYGPGHAYKSGRSI 172
L + GG + + V+ E F+L SM +F + PG A+ + +I
Sbjct: 137 IRELNSL--ISGGVGGGDEAGD--EEVTDTEWFFLVSMTQSFVKGTGL-PGQAFSNSDTI 191
Query: 173 WTSGIVSCSDHYESRSFLAMSAGFQTVVFVPAKSGVVELGSVKLIPEEQNVVEMVKTVF 231
W SG + + R+ G QT+V V ++GVVELGS ++I + ++V+ V T F
Sbjct: 192 WLSGSNALAGSSCERARQGQIYGLQTMVCVATENGVVELGSSEIIHQSSDLVDKVDTFF 250
Score = 78 (32.5 bits), Expect = 5.4e-41, Sum P(3) = 5.4e-41
Identities = 20/82 (24%), Positives = 39/82 (47%)
Query: 418 NKQKQISVP-EIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVSTTEDKV 476
N++ + + E+D + DA++R+ C +HP + M+ E + +++S D +
Sbjct: 500 NQESSVLIEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLM 559
Query: 477 IH--TFSIQTQSGASEQLKEKL 496
I T + Q +QLK L
Sbjct: 560 IQQATVKMGNQFFTQDQLKVAL 581
Score = 39 (18.8 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 10/45 (22%), Positives = 19/45 (42%)
Query: 272 LNFASDSYEIQAIGSNQVYGNSSNRCRSEDEAKLFPHLNQMIVGG 316
L + Y+ + S + N ++ E ++ LN +I GG
Sbjct: 103 LGWGDGYYKGEEEKSRKKKSNPASAAEQEHRKRVIRELNSLISGG 147
Score = 38 (18.4 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 276 SDSYEIQAIGSNQVYGNSSNRCR 298
S+S I GSN + G+S R R
Sbjct: 186 SNSDTIWLSGSNALAGSSCERAR 208
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 290 (107.1 bits), Expect = 9.6e-40, Sum P(4) = 9.6e-40
Identities = 58/84 (69%), Positives = 70/84 (83%)
Query: 349 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRV 408
ANGREEPLNHVEAERQRREKLNQRFYALRAVVPN+SKMDKASLLGDAI+YI +L+ K+
Sbjct: 516 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTA 575
Query: 409 LETEKDMSNNKQKQISVPEIDFQP 432
LET+K+ ++ + + E D +P
Sbjct: 576 LETDKETLQSQMESLK-KERDARP 598
Score = 161 (61.7 bits), Expect = 9.6e-40, Sum P(4) = 9.6e-40
Identities = 52/193 (26%), Positives = 89/193 (46%)
Query: 48 VHQRLCQVVEGSN--WNYAIYWHAS-NLKSGGSALIWGDGHCRDPXXXXXXXXXXXXXXX 104
+ QRL ++EGS W YAI+W +S ++ +G S L WGDG+ +
Sbjct: 68 LQQRLQSIIEGSRETWTYAIFWQSSIDVSTGASLLGWGDGYYKG--CDDDKRKQRSSTPA 125
Query: 105 XXXXXXXXXXXXXXLQKLHACFGGLENYASRFDGVSGVEMFYLTSMYFNFRCDSAYG-PG 163
L L A G + A + V+ E F+L SM +F + G PG
Sbjct: 126 AAAEQEHRKRVLRELNSLIAGAGAAPDEAVE-EEVTDTEWFFLVSMTQSF--PNGLGLPG 182
Query: 164 HAYKSGRSIWTSGIVSCSDHYESRSFLAMSAGFQTVVFVPAKSGVVELGSVKLIPEEQNV 223
A + + W + +S + +R A + G +T+V +P +GV+ELGS +I + +
Sbjct: 183 QALFAAQPTWIATGLSSAPCDRARQ--AYTFGLRTMVCLPLATGVLELGSTDVIFQTGDS 240
Query: 224 VEMVKTVFEGSSS 236
+ ++ +F S++
Sbjct: 241 IPRIRALFNLSAA 253
Score = 73 (30.8 bits), Expect = 9.6e-40, Sum P(4) = 9.6e-40
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 436 DAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVSTTEDKVIHTFSIQTQSGASEQLKEK 495
+A++RV C +HP + +M E + ++VS +D +I +++ S Q ++
Sbjct: 625 EAMIRVQCHKRNHPAARLMTALRELDLDVYHASVSVVKDLMIQQVAVKMASRVYSQ--DQ 682
Query: 496 LLAAL 500
L AAL
Sbjct: 683 LNAAL 687
Score = 38 (18.4 bits), Expect = 9.6e-40, Sum P(4) = 9.6e-40
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 264 FSPKVEDELNFASDS 278
F P+ + LNF +DS
Sbjct: 373 FKPETGEILNFGNDS 387
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 275 (101.9 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 53/71 (74%), Positives = 63/71 (88%)
Query: 349 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRV 408
ANGREEPLNHVEAERQRREKLNQRFY+LRAVVPN+SKMDKASLLGDAI+YI +L+ K++
Sbjct: 407 ANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQ 466
Query: 409 LETEKDMSNNK 419
E++K+ K
Sbjct: 467 AESDKEEIQKK 477
Score = 157 (60.3 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 65/273 (23%), Positives = 121/273 (44%)
Query: 48 VHQRLCQVVE--GSNWNYAIYW---HASNLKSGGSALI--WGDGHCRDPXXXXXXXXXXX 100
+ QRL ++E G NW YAI+W H + +G + +I WGDG+ +
Sbjct: 52 LQQRLQALIESAGENWTYAIFWQISHDFDSSTGDNTVILGWGDGYYKGEEDKEKKKNNTN 111
Query: 101 XXXXXXXXXXXXXXXXXXLQKLHACF-GGLE-NYASRFDGVSGVEMFYLTSMYFNFRCDS 158
+++L++ GG+ + S + V+ E F+L SM +F +
Sbjct: 112 TAEQEHRKRV--------IRELNSLISGGIGVSDESNDEEVTDTEWFFLVSMTQSF-VNG 162
Query: 159 AYGPGHAYKSGRSIWTSGIVSCSDHYESRSFLAMSAGFQTVVFVPAKSGVVELGSVKLIP 218
PG ++ + R IW SG + + R+ G +T+V + ++GVVELGS ++I
Sbjct: 163 VGLPGESFLNSRVIWLSGSGALTGSGCERAGQGQIYGLKTMVCIATQNGVVELGSSEVIS 222
Query: 219 EEQNVVEMVKTVFE-----GSSSVQTKVF-----PKIFGHELSLGGSKSQSISINFSPKV 268
+ +++ V +F G++ V+ + P ++ +L S+ + I +V
Sbjct: 223 QSSDLMHKVNNLFNFNNGGGNNGVEASSWGFNLNPDQGENDPALWISEPTNTGIESPARV 282
Query: 269 ED----ELNFASDSYEIQAIGSNQVYG-NSSNR 296
+ N SDS++I + N + + NR
Sbjct: 283 NNGNNSNSNSKSDSHQISKLEKNDISSVENQNR 315
Score = 85 (35.0 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 25/94 (26%), Positives = 43/94 (45%)
Query: 412 EKDMSNNKQKQISVP-EIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVS 470
E+ SN S+ EID + D ++RV C DHP + M+ E + +++S
Sbjct: 497 ERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLS 556
Query: 471 TTEDKVIH--TFSIQTQSGASEQLKEKLLAALSK 502
D +I T + +Q +QLK L+ + +
Sbjct: 557 VVNDLMIQQATVKMGSQFFNHDQLKVALMTKVGE 590
Score = 44 (20.5 bits), Expect = 7.8e-27, Sum P(3) = 7.8e-27
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 292 NSSNRCRSEDEAKLFPHLNQMIVGGFDAQARVSSLEQKD 330
N++N E ++ LN +I GG + E D
Sbjct: 108 NNTNTAEQEHRKRVIRELNSLISGGIGVSDESNDEEVTD 146
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 323 (118.8 bits), Expect = 3.2e-32, Sum P(2) = 3.2e-32
Identities = 112/392 (28%), Positives = 190/392 (48%)
Query: 139 VSGVEMFYLTSMYFNFRCDSAYGPGHAYKSGRSIWTSGIVSCSDHYESRSFLAMSAGFQT 198
V+ +E F+L SM ++F S G A+ S + +G R+ G QT
Sbjct: 134 VTDMEWFFLVSMTWSFGNGSGLA-GKAFASYNPVLVTGSDLIYGSGCDRAKQGGDVGLQT 192
Query: 199 VVFVPAKSGVVELGSVKLIPEEQNVVEMVKTVFEGSS--SVQTKVFPKIFGHELSLGGSK 256
++ +P+ +GV+EL S + I ++ ++ +F GS S ++F +L S
Sbjct: 193 ILCIPSHNGVLELASTEEIRPNSDLFNRIRFLFGGSKYFSGAPNSNSELFPFQLESSCSS 252
Query: 257 SQSISINFSPK-VEDE--LNFASDSYEIQAIGSNQVYGNSSNRCRSEDEAKLFPHLNQMI 313
+ + + N SP +++ LNF++ S + V N +S + + +Q
Sbjct: 253 TVTGNPNPSPVYLQNRYNLNFSTSSSTLARAPCGDVLSFGENVKQSFENRNPNTYSDQ-- 310
Query: 314 VGGFDAQARVSSLEQKDDSSPQXXXXXXXXXXXXXANGREEPLNHVEAERQRREKLNQRF 373
+ A V LE+K A+GR++PLNHVEAER RREKLN RF
Sbjct: 311 IQNVVPHATVM-LEKKKGKK----------RGRKPAHGRDKPLNHVEAERMRREKLNHRF 359
Query: 374 YALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEK---DMSNNKQKQIS-----V 425
YALRAVVPN+SKMDK SLL DA+ YI +L+ K +E EK ++ N+ K+I+ +
Sbjct: 360 YALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKHAIEIQFNELKEIAGQRNAI 419
Query: 426 PEI-DFQPR-------------HEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVST 471
P + ++ + +DA+VRV D HP + +M + ++ +++S
Sbjct: 420 PSVCKYEEKASEMMKIEVKIMESDDAMVRVESRKDHHPGARLMNALMDLELEVNHASISV 479
Query: 472 TEDKVIHTFSIQT--QSGASEQLKEKLLAALS 501
D +I +++ + E+L++ L++ +S
Sbjct: 480 MNDLMIQQANVKMGLRIYKQEELRDLLMSKIS 511
Score = 77 (32.2 bits), Expect = 3.2e-32, Sum P(2) = 3.2e-32
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 9 EEDKAMVESVLGTEACEFLIKSTANNVMAELVTPPGDLGVHQRLCQVVEGSN--WNYAIY 66
+++ M+E++L ++ L+ + N+ E P +RL V+ G++ W+YAI+
Sbjct: 5 DDNLLMIEALLTSDPSPPLLPA---NLSLETTLP-------KRLHAVLNGTHEPWSYAIF 54
Query: 67 WHASNLKSGGSALI-WGDG 84
W S G A++ WGDG
Sbjct: 55 WKPSYDDFSGEAVLKWGDG 73
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 214 (80.4 bits), Expect = 4.8e-27, Sum P(3) = 4.8e-27
Identities = 69/198 (34%), Positives = 92/198 (46%)
Query: 292 NSSNRCRSE-DEAKLFPHLNQMIVGGFDAQA---RVSSLEQKDDSSPQXXXXXXXXXXXX 347
N NR +S K H NQ G + A S Q+ S +
Sbjct: 180 NFINRVKSIFGSGKTTKHTNQ--TGSYPKPAVSDHSKSGNQQFGSERKRRRKLETTRVAA 237
Query: 348 XANGREEP--LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMK 405
+ P L+HVEAE+QRREKLN RFYALRA+VP +S+MDKASLL DA++YI L+ K
Sbjct: 238 ATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSK 297
Query: 406 IRVLETEKDMSNNKQKQISVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQ--IV 463
I LETE K K ++D + V ++ P S + E Q IV
Sbjct: 298 IDDLETEI----KKMKMTETDKLD-NSSSNTSPSSVEYQVNQKPSKSNRGSDLEVQVKIV 352
Query: 464 AQESNVSTTEDKVIHTFS 481
+E+ + + V H S
Sbjct: 353 GEEAIIRVQTENVNHPTS 370
Score = 108 (43.1 bits), Expect = 4.8e-27, Sum P(3) = 4.8e-27
Identities = 33/113 (29%), Positives = 52/113 (46%)
Query: 137 DGVSGVEMFYLTSMYFNFRCDSAYGPGHAYKSGRSIWTSGIVSCS-DHYESRSFLAMSAG 195
DG +E+FY S Y R P +W +G +YE R+ A G
Sbjct: 100 DGGDDLELFYAASFYGEDR-----SPRKEVSDESLVWLTGPDELRFSNYE-RAKEAGFHG 153
Query: 196 FQTVVFVPAKSGVVELGSVKLIPEEQNVVEMVKTVFEGSSSV----QTKVFPK 244
T+V +P +G++ELGS + I + +N + VK++F + QT +PK
Sbjct: 154 VHTLVSIPINNGIIELGSSESIIQNRNFINRVKSIFGSGKTTKHTNQTGSYPK 206
Score = 86 (35.3 bits), Expect = 4.8e-27, Sum P(3) = 4.8e-27
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 27 LIKSTANNVMAELVTPPGDLGVHQRLCQVVEGS--NWNYAIYWHAS-NLKSGGSALIWGD 83
L+ T A + + P DL + Q+L VVE S W Y I+W + +S S L+W D
Sbjct: 14 LLSFTQQTPAAIVSSSPPDLVLQQKLRFVVETSPDRWAYVIFWQKMFDDQSDRSYLVWVD 73
Query: 84 GH 85
GH
Sbjct: 74 GH 75
Score = 75 (31.5 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 27/137 (19%), Positives = 59/137 (43%)
Query: 367 EKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMSNNKQKQISVP 426
E L + L + + KM + L ++ + + ++ +V +K +N+ +
Sbjct: 292 ESLKSKIDDLETEIKKM-KMTETDKLDNSSSNTSPSSVEYQV--NQKPSKSNRGSDL--- 345
Query: 427 EIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVSTTEDKVIHTFSIQTQS 486
E+ + E+A++RV +HP S++M E Q +N S ++ +
Sbjct: 346 EVQVKIVGEEAIIRVQTENVNHPTSALMSALMEMDCRVQHANASRLSQVMVQDVVVLVPE 405
Query: 487 G--ASEQLKEKLLAALS 501
G + ++L+ L+ LS
Sbjct: 406 GLRSEDRLRTTLVRTLS 422
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 186 (70.5 bits), Expect = 7.2e-25, Sum P(3) = 7.2e-25
Identities = 42/137 (30%), Positives = 77/137 (56%)
Query: 354 EPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEK 413
E L+HV AER+RREKLN++F LR++VP ++KMDK S+LGD I Y+ L+ ++ LE
Sbjct: 360 EDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTH 419
Query: 414 DMSNNKQ----KQISVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNV 469
+K+ K+ + E++ D ++ + C D + +++ H++ + + V
Sbjct: 420 HEQQHKRTRTCKRKTSEEVEVSIIENDVLLEMRCEYRDGLLLDILQVL--HELGIETTAV 477
Query: 470 STTEDKVIHTFSIQTQS 486
T+ + H F + ++
Sbjct: 478 HTSVND--HDFEAEIRA 492
Score = 158 (60.7 bits), Expect = 7.2e-25, Sum P(3) = 7.2e-25
Identities = 37/95 (38%), Positives = 51/95 (53%)
Query: 137 DGVSGVEMFYLTSMYFNFRCDSAYGPGHAYKSGRSIWTSGIVSCSDHYESRSFLAMSAGF 196
+ ++ E FYL + F+F S PG AY + +W SG SR+ LA SA
Sbjct: 108 EDLTETEWFYLMCVSFSFPPPSGM-PGKAYARRKHVWLSGANEVDSKTFSRAILAKSAKI 166
Query: 197 QTVVFVPAKSGVVELGSVKLIPEEQNVVEMVKTVF 231
QTVV +P GVVELG+ K + E+ VE+ K+ F
Sbjct: 167 QTVVCIPMLDGVVELGTTKKVREDVEFVELTKSFF 201
Score = 54 (24.1 bits), Expect = 7.2e-25, Sum P(3) = 7.2e-25
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 56 VEGSNWNYAIYWHASNLKSGGSALIWGDGH 85
V+ +W Y+++W + L+WG+G+
Sbjct: 28 VQSVDWTYSVFWQFCPQQR---VLVWGNGY 54
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 174 (66.3 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 36/91 (39%), Positives = 62/91 (68%)
Query: 353 EEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETE 412
EE NH +E++RREKLN+RF LR+++P+ISK+DK S+L D I Y+ DLQ +++ LE+
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESC 460
Query: 413 KDMSNNKQKQISVPEIDFQPRHEDAVVRVSC 443
++ S + + +I++ + +P E+ +C
Sbjct: 461 RE-SADTETRITMMKRK-KPDDEEERASANC 489
Score = 156 (60.0 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 35/95 (36%), Positives = 50/95 (52%)
Query: 137 DGVSGVEMFYLTSMYFNFRCDSAYGPGHAYKSGRSIWTSGIVSCSDHYESRSFLAMSAGF 196
+ ++ E +YL M F F PG A +G IW + +RS LA SA
Sbjct: 109 EDLTDTEWYYLVCMSFVFNIGEGI-PGGALSNGEPIWLCNAETADSKVFTRSLLAKSASL 167
Query: 197 QTVVFVPAKSGVVELGSVKLIPEEQNVVEMVKTVF 231
QTVV P GV+E+G+ + I E+ NV++ VKT+F
Sbjct: 168 QTVVCFPFLGGVLEIGTTEHIKEDMNVIQSVKTLF 202
Score = 69 (29.3 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 41 TPPGDLGVHQRLCQVVEGSNWNYAIYWHASNLKSGGSALIWGDGH 85
T P +L ++L V W+Y I+W S + G L WGDG+
Sbjct: 8 TVPDNL--KKQLAVSVRNIQWSYGIFWSVSASQPG--VLEWGDGY 48
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 162 (62.1 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 28/70 (40%), Positives = 51/70 (72%)
Query: 352 REEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLET 411
R+E NH E++RREKLN+RF LR ++P+I+K+DK S+L D I Y+ +L+ +++ LE+
Sbjct: 436 RDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELES 495
Query: 412 EKDMSNNKQK 421
++ ++ + +
Sbjct: 496 CRESTDTETR 505
Score = 155 (59.6 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 36/107 (33%), Positives = 52/107 (48%)
Query: 137 DGVSGVEMFYLTSMYFNFRCDSAYGPGHAYKSGRSIWTSGIVSCSDHYESRSFLAMSAGF 196
+ ++ E +YL M F F PG + +G IW + SRS LA SA
Sbjct: 113 EDLADTEWYYLVCMSFVFNIGEGM-PGRTFANGEPIWLCNAHTADSKVFSRSLLAKSAAV 171
Query: 197 QTVVFVPAKSGVVELGSVKLIPEEQNVVEMVKTVFEGSSSVQTKVFP 243
+TVV P GVVE+G+ + I E+ NV++ VKT F + + P
Sbjct: 172 KTVVCFPFLGGVVEIGTTEHITEDMNVIQCVKTSFLEAPDPYATILP 218
Score = 76 (31.8 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 41 TPPGDLGVHQRLCQVVEGSNWNYAIYWHASNLKSGGSALIWGDGH 85
T P +L H L V W+Y I+W S +SG L WGDG+
Sbjct: 9 TVPENLKKH--LAVSVRNIQWSYGIFWSVSASQSG--VLEWGDGY 49
Score = 39 (18.8 bits), Expect = 6.1e-11, Sum P(3) = 6.1e-11
Identities = 11/45 (24%), Positives = 24/45 (53%)
Query: 419 KQKQISVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIV 463
+++Q +V + F PR++D + +S++ KT HQ++
Sbjct: 339 QEQQRNVKTLSFDPRNDDVHYQ-------SVISTIFKT--NHQLI 374
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 148 (57.2 bits), Expect = 2.9e-21, Sum P(3) = 2.9e-21
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 137 DGVSGVEMFYLTSMYFNFRCDSAYGPGHAYKSGRSIWTSGIVSCSDHYESRSFLAMSAGF 196
+ ++ E +Y+ M + FR PG +Y S RS+W S R+ LA SA
Sbjct: 109 EDIADTEWYYVVCMTYAFRPGQGL-PGRSYASNRSVWLCNAQSADSKTFLRALLAKSASI 167
Query: 197 QTVVFVPAKSGVVELGSVKLIPEEQNVVEMV 227
QT+V +P SGV+ELG+ + E+ N+V +
Sbjct: 168 QTIVCIPFMSGVLELGTTDPVSEDPNLVNRI 198
Score = 144 (55.7 bits), Expect = 2.9e-21, Sum P(3) = 2.9e-21
Identities = 25/55 (45%), Positives = 44/55 (80%)
Query: 357 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLET 411
+HV +ER+RREKLN+ F L++++P++ K+DKAS+L + ITY+ L+ +++ LE+
Sbjct: 378 SHVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVLEKRVKELES 432
Score = 73 (30.8 bits), Expect = 2.9e-21, Sum P(3) = 2.9e-21
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 43 PGDLGVHQRLCQVVEGSNWNYAIYWHASNLKSGGSALIWGDG 84
PG RL V +W+Y I+W S G L W DG
Sbjct: 14 PGTNHFRSRLAAAVRSISWSYTIFWSTSTSLPG--VLTWNDG 53
>TAIR|locus:2127023 [details] [associations]
symbol:ATMYC1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048629 "trichome
patterning" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=RCA] [GO:0009913 "epidermal cell differentiation"
evidence=RCA] [GO:0009957 "epidermal cell fate specification"
evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002687
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 GO:GO:0048629 IPI:IPI00938615 RefSeq:NP_001154194.1
UniGene:At.28313 ProteinModelPortal:F4JHC4 SMR:F4JHC4
EnsemblPlants:AT4G00480.2 GeneID:827965 KEGG:ath:AT4G00480
OMA:FWSLSTR Uniprot:F4JHC4
Length = 580
Score = 217 (81.4 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 76/295 (25%), Positives = 128/295 (43%)
Query: 137 DGVSGVEMFYLTSMYFNFRCDSAYGPGHAYKSGRSIWTSGIVSCSDHYESRSFLAMSAGF 196
D +S E +YL SM + F PG A +G +IW + SRS LA SA
Sbjct: 124 DDLSDEEWYYLVSMSYVFSPSQCL-PGRASATGETIWLCNAQYAENKLFSRSLLARSASI 182
Query: 197 QTVVFVPAKSGVVELGSVKLIPEEQNVVEMVKTVFEGSSSVQTKVFPKIFGHELSLGGSK 256
QTVV P GV+ELG +LI E+ N++ +K+ S+ Q K E+ + K
Sbjct: 183 QTVVCFPYLGGVIELGVTELISEDHNLLRNIKSCLMEISAHQDNDDEKKM--EIKISEEK 240
Query: 257 SQSISINFSPKVEDELNFASDSYEIQAIGSNQVYGNSSN-RCRSEDEAKLFPHLNQMIVG 315
Q + + S +++L++ + +++ N N R R + P +
Sbjct: 241 HQ-LPLGIS---DEDLHYKRTISTVLNYSADRSGKNDKNIRHRQPNIVTSEP--GSSFLR 294
Query: 316 GFDAQARVSSLEQKDDSSPQXXXXXXXXXXXXXAN---GREEPLNHVEAERQRREKLNQR 372
+ +VS QK S + LN + +R+E N++
Sbjct: 295 WKQCEQQVSGFVQKKKSQNVLRKILHDVPLMHTKRMFPSQNSGLNQDDPSDRRKE--NEK 352
Query: 373 FYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMSNNKQKQISVPE 427
F LR +VP ++++DK S+L + I Y+ +L+ ++ LE+ N ++Q E
Sbjct: 353 FSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCMGSVNFVERQRKTTE 407
Score = 69 (29.3 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 48 VHQRLCQVVEGSNWNYAIYWHASNLKSGGSALIWGDG 84
+ ++L V W+YAI+W +S + G L WG+G
Sbjct: 23 LRKQLALAVRSVQWSYAIFWSSSLTQPG--VLEWGEG 57
Score = 49 (22.3 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 12/52 (23%), Positives = 28/52 (53%)
Query: 411 TEKDMSNNKQKQISV----PEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFS 458
T+ D ++ + +Q++V + + + + V+ V C D+ V+ +M+T S
Sbjct: 426 TKIDDNSGETEQVTVFRDKTHLRVKLKETEVVIEVRCSYRDYIVADIMETLS 477
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 154 (59.3 bits), Expect = 6.3e-16, Sum P(3) = 6.3e-16
Identities = 28/63 (44%), Positives = 47/63 (74%)
Query: 357 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMS 416
NHV +ER+RREKLN+ F L+++VP+I K+DKAS+L + I Y+ L+ +++ LE+ + S
Sbjct: 392 NHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLKVLEKRVKELESSSEPS 451
Query: 417 NNK 419
+ +
Sbjct: 452 HQR 454
Score = 95 (38.5 bits), Expect = 6.3e-16, Sum P(3) = 6.3e-16
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 137 DGVSGVEMFYLTSMYFNFRCDSAYGPGHAYKSGRSIWTSGIVSCSDHYESRSFLAMSAGF 196
+ ++ E +Y+ M ++F+ PG +Y S S+W S RS LA
Sbjct: 109 EDLADTEWYYVVCMTYSFQPGQGL-PGKSYASNASVWLRNAQSADSKTFLRSLLA----- 162
Query: 197 QTVVFVPAKSGVVELGS 213
+T++ +P SGV+ELG+
Sbjct: 163 KTIICIPFTSGVLELGT 179
Score = 68 (29.0 bits), Expect = 6.3e-16, Sum P(3) = 6.3e-16
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 43 PGDLGVHQRLCQVVEGSNWNYAIYWHASNLKSGGSALIWGDG 84
PG L V +W+YAI+W S G L W DG
Sbjct: 14 PGTNHFRSLLAAAVRSISWSYAIFWSISTSCPG--VLTWNDG 53
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 196 (74.1 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 38/62 (61%), Positives = 47/62 (75%)
Query: 351 GREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLE 410
G P+ HVEAERQRREKLN+RF LRA VP +S+MDKASLL DA+ YI +L+ ++ LE
Sbjct: 88 GGAPPIGHVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRRRVERLE 147
Query: 411 TE 412
E
Sbjct: 148 AE 149
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 173 (66.0 bits), Expect = 9.1e-14, Sum P(3) = 9.1e-14
Identities = 37/81 (45%), Positives = 55/81 (67%)
Query: 352 REEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLET 411
+ + ++EAER+RR+KLN Y LR++VPNI+KMD+AS+LGDAI YI LQ +++ L+
Sbjct: 280 KRQQCKNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVKELQD 339
Query: 412 EKDMSNNKQKQISVPEIDFQP 432
E + ++ K V ID P
Sbjct: 340 ELEDNHVHHKPPDVL-IDHPP 359
Score = 63 (27.2 bits), Expect = 9.1e-14, Sum P(3) = 9.1e-14
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 165 AYKSGRSIWTSGIVSCSDHYESRSFLAMSAGFQTVVFVPAKSGVVELGSVKLIPEEQNVV 224
A S + IW S S+ E+ G +T + VP G+VEL + + + EEQ +
Sbjct: 94 ALLSNQPIWQSS----SEEEEADG----GGGAKTRLLVPVAGGLVELFASRYMAEEQQMA 145
Query: 225 EMV 227
E+V
Sbjct: 146 ELV 148
Score = 57 (25.1 bits), Expect = 9.1e-14, Sum P(3) = 9.1e-14
Identities = 12/46 (26%), Positives = 18/46 (39%)
Query: 25 EFLIKSTANNVMAELVTPPGDLGVHQRLCQVVEGSNWNYAIYWHAS 70
+ L+ +N A G + L +V W+Y IYW S
Sbjct: 5 DHLLMKNSNAAAAAAAVNGGGTSLDAALRPLVGSDGWDYCIYWRLS 50
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 180 (68.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 63/205 (30%), Positives = 97/205 (47%)
Query: 219 EEQNVVEMVKTVFEGSSSV-QTKVFPKIFGHELSLGGSKSQSISINFSPKVEDELNFASD 277
EE ++++ F +S V + + IF H + S I P E + S
Sbjct: 15 EENSIIQQ----FHMNSIVGEVQEAQYIFPHSFTTNNDPSYDDLIEMKPPKILETTYISP 70
Query: 278 SYEIQAIGS-NQVYGNSSNRCRS-ED------EAKLFP-HLNQMIVGGFDAQARVSSLEQ 328
S + + ++ +SS+R S ED E + P +LN + +AQ + Q
Sbjct: 71 SSHLPPNSKPHHIHRHSSSRILSFEDYGSNDMEHEYSPTYLNSIFSPKLEAQVQP---HQ 127
Query: 329 KDDSSPQXXXXXXXXXXXXXANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDK 388
K D + +N ++ H+ AER+RREKL QRF AL A+VP + KMDK
Sbjct: 128 KSDEFNRKGTKRAQPFSRNQSNAQD----HIIAERKRREKLTQRFVALSALVPGLKKMDK 183
Query: 389 ASLLGDAITYITDLQMKIRVLETEK 413
AS+LGDA+ +I LQ ++ LE +K
Sbjct: 184 ASVLGDALKHIKYLQERVGELEEQK 208
Score = 52 (23.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 10/47 (21%), Positives = 24/47 (51%)
Query: 423 ISVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNV 469
+ +PEI+ + ED ++++ C ++ +M + I+ S+V
Sbjct: 244 LDLPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSV 290
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 180 (68.4 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 356 LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETE 412
++HVEAERQRREKLN+RF LRA VP +S+MDKASLL DA YI +L+ ++ LE++
Sbjct: 110 VSHVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYIAELRARVARLESD 166
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 180 (68.4 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 46/128 (35%), Positives = 68/128 (53%)
Query: 356 LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLE----- 410
L HV AER+RREK+NQRF L AV+P + KMDKA++L DA +YI +LQ K++ LE
Sbjct: 129 LEHVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALEEQAAA 188
Query: 411 --TEKDMSN----NKQKQISVP---EIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQ 461
TE M+ + VP E+ P + +VR+ C + + ++ E
Sbjct: 189 RVTEAAMATPSPARAMNHLPVPPEIEVRCSPTNNVVMVRIHCENGEGVIVRILAEVEEIH 248
Query: 462 IVAQESNV 469
+ +NV
Sbjct: 249 LRIINANV 256
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 176 (67.0 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 31/56 (55%), Positives = 44/56 (78%)
Query: 357 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETE 412
+H+ AER+RREK+NQRF L V+P + KMDKA++LGDA+ Y+ +LQ K++ LE E
Sbjct: 167 DHIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEE 222
Score = 40 (19.1 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 425 VPEIDFQPRHEDAVVRVSC 443
VPEI+ + +VRV C
Sbjct: 254 VPEIEVRVWERSVLVRVQC 272
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 178 (67.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 55/186 (29%), Positives = 90/186 (48%)
Query: 257 SQSISINFSPKVED----ELNFASDSYEIQAIG------SNQVYGNSSNRCRSEDEAKLF 306
+ I +NF P++ D L SD Y QA+G + ++ G + ED +
Sbjct: 203 ADQIRLNFLPQMSDYETQHLKMKSD-YHHQALGYLPENGNKEMMGMNPFNTVEEDGIPVI 261
Query: 307 --PHL---NQMIVGGFDAQARVSSLEQKDDSSPQXXXXXXXXXXXXXANGREEPLNHVEA 361
P L Q +V D ++ D S Q G + ++ A
Sbjct: 262 GEPSLLVNEQQVVNDKDMNEN-GRVDSGSDCSDQIDDEDDPKYKKKSGKGSQA--KNLMA 318
Query: 362 ERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMSNNKQK 421
ER+RR+KLN R YALR++VP I+K+D+AS+LGDAI Y+ +LQ + + L+ E + ++ +
Sbjct: 319 ERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSETED 378
Query: 422 QISVPE 427
+ P+
Sbjct: 379 GSNRPQ 384
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 162 (62.1 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 357 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEK 413
+H+ AER+RREKL QRF AL A++P + KMDKAS+LGDAI +I LQ ++ E +K
Sbjct: 126 DHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQK 182
Score = 49 (22.3 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 417 NNKQKQISVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNV 469
N ++PEI+ + +D ++++ C V +M + + SNV
Sbjct: 215 NRNSSSSNLPEIEVRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNV 267
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 147 (56.8 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 362 ERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQ 403
ER RR KLN++ YALR+VVPNI+KMDKAS++ DAI YI LQ
Sbjct: 98 ERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQ 139
Score = 62 (26.9 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 438 VVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVSTTEDKVIHTFSIQTQSGASEQLKEKLL 497
VV V+C ++ V + E ++ +N+++ +HT ++ S Q+K+ +
Sbjct: 233 VVSVTCSKRRDAMARVCRALEELRLRVITANITSVAGCPMHTLFVEVDHMDSVQMKQMVE 292
Query: 498 AALSK 502
AALS+
Sbjct: 293 AALSQ 297
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 172 (65.6 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 38/92 (41%), Positives = 53/92 (57%)
Query: 323 VSSLEQKDDSSPQXXXXXXXXXXXXXANGREE--PLNHVEAERQRREKLNQRFYALRAVV 380
VS L + D + G+++ P ++ AER+RR+KLN R Y LR+VV
Sbjct: 271 VSGLNYESDEINESGKAAESVQIGGGGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVV 330
Query: 381 PNISKMDKASLLGDAITYITDLQMKIRVLETE 412
P ISKMD+AS+LGDAI Y+ +L +I L E
Sbjct: 331 PKISKMDRASILGDAIDYLKELLQRINDLHNE 362
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 169 (64.5 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 33/55 (60%), Positives = 43/55 (78%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETE 412
H+ AER+RREKL+QRF AL +VP + KMDKAS+LGDAI Y+ LQ +++ LE E
Sbjct: 182 HILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEE 236
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 174 (66.3 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 35/62 (56%), Positives = 46/62 (74%)
Query: 355 PLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKD 414
P ++ AER+RR+KLN R Y LR+VVP ISKMD+AS+LGDAI Y+ +L KI L+ E +
Sbjct: 334 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDLQNELE 393
Query: 415 MS 416
S
Sbjct: 394 SS 395
Score = 41 (19.5 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 126 FGGLENYASR---FDGVSGVEMF 145
FGG AS+ F G++G +MF
Sbjct: 163 FGGFGTAASQMPEFGGLAGFDMF 185
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 155 (59.6 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 260 ISINFSPKVEDELNFASD---SYEIQAIGSNQVYGNSSNRC-RSEDEAKLFPHL---NQM 312
+ I+F + +E N + D S +A S++ C R + +A + P + N+
Sbjct: 13 VDIDFDFNIYEENNLSPDESLSNSRRADQSSKFDHQMHFECLREKPKAAVKPMMKINNKQ 72
Query: 313 IVGGFDAQARVSSLEQKDDSSPQXXXXXXXXXXXXXANGREEPL---NHVEAERQRREKL 369
+ FD + V S ++ ++G P+ HV AER+RREKL
Sbjct: 73 QLISFDFSSNVISSPAAEEII-MDKLVGRGTKRKTCSHGTRSPVLAKEHVLAERKRREKL 131
Query: 370 NQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMSNNKQKQISV 425
+++F AL A++P + K DK ++L DAI+ + LQ ++R L+ EK+ + + I V
Sbjct: 132 SEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEATRQMESMILV 187
Score = 50 (22.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 424 SVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVSTTEDKVI 477
++PEI+ + D ++R+ C + +++ T Q+ + S V D +
Sbjct: 213 ALPEIEAKISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTL 266
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 144 (55.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 29/71 (40%), Positives = 49/71 (69%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETE-KDMS 416
++ +ER+RRE++NQ Y LRAVVP I+K++K + DA+ YI +L ++ + LE E K ++
Sbjct: 265 NLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELKGIN 324
Query: 417 NNKQKQISVPE 427
+ K+I+ E
Sbjct: 325 EMECKEIAAEE 335
Score = 69 (29.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 196 FQTVVFVPAKSGVVELGSVKLIPEEQNVVEMVK----TVFEG--SSSVQTKVFPKI---- 245
F T V VP G+VEL + + P ++++V ++ T FE +Q ++ P+
Sbjct: 127 FSTRVLVPVSDGLVELFAFDMRPFDESMVHLIMSRCTTFFEPFPEQRLQFRIIPRAEESM 186
Query: 246 -FGHELSLGGSKSQSIS 261
G LS+ G S S+S
Sbjct: 187 SSGVNLSVEGGGSSSVS 203
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 162 (62.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 32/69 (46%), Positives = 51/69 (73%)
Query: 357 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMS 416
NHV +ER+RREKLN+ F L+++VP+I K+DKAS+L + I Y+ +L+ +++ LE+ K +S
Sbjct: 188 NHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESGKKVS 247
Query: 417 NN-KQKQIS 424
K+K S
Sbjct: 248 RPAKRKPCS 256
Score = 45 (20.9 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 202 VPAKSGVVELGSVKLIPEEQNVVEMVKTVF 231
VP G V V + EE NVV + T F
Sbjct: 4 VPTSWGFV-YSRVNKVSEEPNVVNRITTAF 32
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 155 (59.6 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 32/72 (44%), Positives = 49/72 (68%)
Query: 354 EPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEK 413
+P ++ AER+RR++LN R LR++VP ISKMD+ S+LGDAI Y+ +L KI L+ E+
Sbjct: 175 QPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEE 234
Query: 414 -DMSNNKQKQIS 424
++ N+ S
Sbjct: 235 QELGNSNNSHHS 246
Score = 48 (22.0 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 19/80 (23%), Positives = 34/80 (42%)
Query: 413 KDMSNNKQKQISVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVSTT 472
KD++ N+ + P+ + R ED V + C + S + T + ++ +S
Sbjct: 253 KDLNANEPLVRNSPKFEIDRRDEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVISCF 312
Query: 473 EDKVIHTFSIQTQ-SGASEQ 491
D FS+Q S +EQ
Sbjct: 313 SD-----FSLQASCSEGAEQ 327
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 150 (57.9 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 28/60 (46%), Positives = 43/60 (71%)
Query: 357 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMS 416
NHV +ER+RREKL + F L++VVP+I K+DKAS+L + I Y+ +L+ ++ LE+ S
Sbjct: 244 NHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEELESSSQPS 303
Score = 57 (25.1 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 191 AMSAGFQTVVFVP-AKSGVVELGSVKLIPEEQNVVEMV 227
+ SA +T+V VP GV+ELG+ + E+ +V+ +
Sbjct: 13 SQSASIKTIVCVPFIMHGVLELGTTDPVSEDPALVDRI 50
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 156 (60.0 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 33/73 (45%), Positives = 50/73 (68%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMSN 417
+V +ER RR+KLNQR +ALR+VVPNISK+DKAS++ D+I Y+ +L + + LE E
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
Query: 418 NKQKQISVPEIDF 430
++ + P D+
Sbjct: 115 SRSTLLENPVRDY 127
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 156 (60.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 46/158 (29%), Positives = 78/158 (49%)
Query: 354 EPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVL-ETE 412
+P ++ AER+RR++LN R LR++VP I+KMD+ S+LGDAI Y+ +L KI L E E
Sbjct: 148 QPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDE 207
Query: 413 KDMSNNKQKQISVPE-------IDFQ--PRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIV 463
+++ +N + + F+ R + + + CP V S + T +
Sbjct: 208 QELGSNSHLSTLITNESMVRNSLKFEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLE 267
Query: 464 AQESNVSTTEDKVIHT--FSI--QTQSGASEQLKEKLL 497
++ +S D + F + Q SE K+ L+
Sbjct: 268 IEQCVISCFSDFSLQASCFEVGEQRYMVTSEATKQALI 305
Score = 40 (19.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 257 SQSISINFSPKVEDELNFASDSYEIQAIGSNQVYGNSSNRCRSE 300
SQ + N+SP +E+ +F S + + ++ G S +E
Sbjct: 113 SQENTNNYSPLMEESKSFISIGETNKKRSNKKLEGQPSKNLMAE 156
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 156 (60.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 351 GREEP---LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIR 407
GR EP HV AER+RR+KLN+R AL A++P + K DKA++L DAI ++ LQ +++
Sbjct: 123 GRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVK 182
Query: 408 VLETEKDMSNNKQKQI 423
LE E+ ++ + I
Sbjct: 183 KLEEERVVTKKMDQSI 198
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 158 (60.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 28/57 (49%), Positives = 42/57 (73%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKD 414
H+ AER+RREK+NQRF L V+P + KMDKA++L DA+ Y+ ++Q K+ LE ++
Sbjct: 193 HIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSELEQHQN 249
Score = 39 (18.8 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 416 SNNKQKQISVPEIDFQPRHEDAVVRV 441
S++ + S+PEI+ + H + +VR+
Sbjct: 283 SSSGTARSSLPEIEAKISHGNVMVRI 308
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 33/92 (35%), Positives = 55/92 (59%)
Query: 355 PLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKD 414
P ++ AER+RR++LN R LR++VP ISKMD+ S+LGD I Y+ +L +I+ LE E
Sbjct: 180 PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTLEEEIG 239
Query: 415 MSNNKQKQISVPEIDFQPRHEDAVVRVSCPLD 446
++ + ++ + + + +VR S D
Sbjct: 240 VTPEELDLLNTMKDSSSGNNNEMLVRNSTKFD 271
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 154 (59.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 34/142 (23%), Positives = 80/142 (56%)
Query: 357 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMS 416
+H EAER+RRE++N LR+++PN +K DKASLL + I ++ +L+ + V+ +E ++
Sbjct: 177 SHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVI-SETNLV 235
Query: 417 NNKQKQISVPEIDFQPRHEDA-VVRVSCPLDDHP--VSSVMKTFSEHQIVAQESNVSTTE 473
+ +++V + + + V++ S +D + ++KT ++ ++ ++T
Sbjct: 236 PTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLKAMRLKTLKAEITTVG 295
Query: 474 DKVIHTFSIQTQSGASEQLKEK 495
+V + + + + E+++E+
Sbjct: 296 GRVKNVLFVTGEESSGEEVEEE 317
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 153 (58.9 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 355 PLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEK- 413
P ++ AER+RR++LN R LR+VVP ISKMD+ S+LGD I Y+ +L +I+ L+ E
Sbjct: 194 PSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVEAA 253
Query: 414 --DMSNNKQKQISVPEID 429
D S++ + +S+ +++
Sbjct: 254 TGDSSSSSTENLSMLKLN 271
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 142 (55.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 35/73 (47%), Positives = 50/73 (68%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIR-VLETEKDMS 416
++EAER+RREKL+ R ALR+ VP ++ M KAS++ DAITYI +LQ ++ +LET +M
Sbjct: 33 NLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLETFHEME 92
Query: 417 NNKQKQISVPEID 429
+ PEID
Sbjct: 93 E------APPEID 99
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 30/97 (30%), Positives = 55/97 (56%)
Query: 317 FDAQA-RVSSLEQKDDSSPQXXXXXXXXXXXXXANGREEPLNHVEAERQRREKLNQRFYA 375
FD + R E ++D + + + + +ER+RR ++ + YA
Sbjct: 90 FDGDSVRAGGEEDEEDYNDGDDSSATTTNNDGTRKTKTDRSRTLISERRRRGRMKDKLYA 149
Query: 376 LRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETE 412
LR++VPNI+KMDKAS++GDA+ Y+ +LQ + + L+++
Sbjct: 150 LRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSD 186
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 143 (55.4 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 32/70 (45%), Positives = 48/70 (68%)
Query: 349 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRV 408
A G+E ++EAER+RR +LN +ALRAVVP I+KM K + L DAI +I +LQ + V
Sbjct: 57 AMGKEFKSKNLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHIKNLQNE--V 114
Query: 409 LETEKDMSNN 418
LE ++ + ++
Sbjct: 115 LELQRQLGDS 124
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 150 (57.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 32/62 (51%), Positives = 41/62 (66%)
Query: 349 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRV 408
AN +E HV AER+RREKL Q+F AL +VP + K DK SLLG I Y+ L+ K++
Sbjct: 283 ANAQE----HVIAERKRREKLQQQFVALATIVPGLKKTDKISLLGSTIDYVKQLEEKVKA 338
Query: 409 LE 410
LE
Sbjct: 339 LE 340
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 145 (56.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 36/92 (39%), Positives = 49/92 (53%)
Query: 321 ARVSSLEQKDDSSPQXXXXXXXXXXXXXANGREEPLNHVEAERQRREKLNQRFYALRAVV 380
A S D SSP A + ++ ER RR++LN++ +ALRAVV
Sbjct: 64 AYTSQSRYADSSSPDVVNLCSTAVASAAAAASSK---NIAMERDRRKRLNEKLFALRAVV 120
Query: 381 PNISKMDKASLLGDAITYITDLQMKIRVLETE 412
P I+KMDKAS++ DAI +I LQ + R L E
Sbjct: 121 PKITKMDKASIVRDAIAHIEKLQEEERQLLDE 152
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 141 (54.7 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 40/158 (25%), Positives = 79/158 (50%)
Query: 357 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMS 416
+H AE++RR+++N ALR +VPN K+DKA+LL I + +L+ K +D+
Sbjct: 66 SHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAESPIFQDLP 125
Query: 417 NNKQKQISVPEI--DFQPRHEDAVVRVSCPLDDHP--VSSVMKTFSEHQIVAQESNVSTT 472
+ PE DF+ + + S +D P +S +++ ++ Q+ ++ + +
Sbjct: 126 TEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLETIQAEIISV 185
Query: 473 EDKVIHTFSIQ-------TQSGASEQ-LKEKLLAALSK 502
++ F ++ T AS + LK+ L +AL++
Sbjct: 186 GGRMRINFILKDSNCNETTNIAASAKALKQSLCSALNR 223
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 133 (51.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 25/69 (36%), Positives = 44/69 (63%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMSN 417
H +E++RR K+N++ AL+ ++PN +K DKAS+L +AI Y+ LQ++++ L +
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMNGLGL 157
Query: 418 NKQKQISVP 426
N + VP
Sbjct: 158 NPMRLPQVP 166
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 127 (49.8 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 23/59 (38%), Positives = 43/59 (72%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMS 416
H +ER+RR+++N++ AL+ ++PN +K DK S+L +AI Y+ LQ+++++L K M+
Sbjct: 18 HNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGKGMA 76
>UNIPROTKB|Q7F7Z2 [details] [associations]
symbol:Os01g0159800 "ESTs C26093(C11622)" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 OMA:QPETISD ProtClustDB:CLSN2691085 EMBL:AP002539
RefSeq:NP_001042087.1 UniGene:Os.1443
EnsemblPlants:LOC_Os01g06640.1 EnsemblPlants:LOC_Os01g06640.2
GeneID:4324065 KEGG:osa:4324065 Uniprot:Q7F7Z2
Length = 258
Score = 134 (52.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 39/161 (24%), Positives = 76/161 (47%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMSN 417
H EAER+RRE++N LR ++P+ +MDKA+LL + + DL+ K + T++
Sbjct: 69 HSEAERRRRERINAHLTTLRRMIPDTKQMDKATLLARVVDQVKDLKRKASEI-TQRTPLP 127
Query: 418 NKQKQISVP---------EIDFQPRHEDAVVRVSCPLDDHP--VSSVMKTFSEHQIVAQE 466
+ ++S+ H+ ++ S DD P ++ + F ++
Sbjct: 128 PETNEVSIECFTGDAATAATTVAGNHKTLYIKASISCDDRPDLIAGITHAFHGLRLRTVR 187
Query: 467 SNVSTTEDKVIHTFSIQTQSGAS-----EQLKEKLLAALSK 502
+ +++ +V H F + + G + + LKE + AL+K
Sbjct: 188 AEMTSLGGRVQHVFILCREEGIAGGVSLKSLKEAVRQALAK 228
>UNIPROTKB|Q7X8R0 [details] [associations]
symbol:OSJNBa0083N12.3 "OSJNBa0083N12.3 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG254981 EMBL:AL606683
RefSeq:NP_001053749.1 UniGene:Os.49995
EnsemblPlants:LOC_Os04g51070.1 GeneID:4336865 KEGG:osa:4336865
OMA:RASIVGD ProtClustDB:CLSN2695079 Uniprot:Q7X8R0
Length = 464
Score = 138 (53.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 28/69 (40%), Positives = 47/69 (68%)
Query: 362 ERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQM---KIRVLETEKDMSNN 418
ER+RRE+LN +F LR + PN +K D+AS++GDAI YI +L ++++L +K NN
Sbjct: 270 ERERREQLNVKFRTLRMLFPNPTKNDRASIVGDAIEYIDELNRTVKELKILVEQKRHGNN 329
Query: 419 KQKQISVPE 427
++K + + +
Sbjct: 330 RRKVLKLDQ 338
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 132 (51.5 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 23/52 (44%), Positives = 41/52 (78%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVL 409
H +E++RR ++N++ AL++++PN SK DKAS+L DAI Y+ LQ+++++L
Sbjct: 37 HNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 88
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 132 (51.5 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 31/98 (31%), Positives = 54/98 (55%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMSN 417
H AER RRE++ +R +L+ +VPN +K DKAS+L + I Y+ LQ++++VL + +
Sbjct: 141 HSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSR-LGG 199
Query: 418 NKQKQISVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMK 455
+ E D HE+ + +H V+ +M+
Sbjct: 200 AASASSQISE-DAGGSHENTSSSGEAKMTEHQVAKLME 236
>UNIPROTKB|Q5SMX2 [details] [associations]
symbol:P0498B01.25 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003417 ProteinModelPortal:Q5SMX2
EnsemblPlants:LOC_Os01g09930.1 Gramene:Q5SMX2 HOGENOM:HOG000237612
OMA:IRAREHI Uniprot:Q5SMX2
Length = 412
Score = 131 (51.2 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 353 EEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETE 412
+ L H+ +ER+RREKLN F AL+AV+P SK DKAS+L A +I L+ K+ LE E
Sbjct: 180 DNQLQHMISERKRREKLNDSFVALKAVLPTGSKKDKASILIRAREHIKSLESKLSELE-E 238
Query: 413 KD 414
K+
Sbjct: 239 KN 240
Score = 45 (20.9 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 13/47 (27%), Positives = 17/47 (36%)
Query: 276 SDSYEIQAIGSNQVYGNSSNRCRSEDEAKLFPHLNQMIVGGFDAQAR 322
S Y S+ + ++S C E A P L G F AR
Sbjct: 76 SFQYSSSTTSSSASFRSASVSCNPESSAAAAPELPAATGGAFSRYAR 122
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 127 (49.8 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 357 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQ 403
+H EAER+RRE++N LR +VP+ S+MDKA+LLG+ + Y+ L+
Sbjct: 31 SHSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLR 77
>UNIPROTKB|Q5N9E6 [details] [associations]
symbol:P0505D12.13 "BHLH transcription factor-like protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 InterPro:IPR025610 Pfam:PF14215 EMBL:AP008207
EMBL:AP003270 EMBL:AK068033 RefSeq:NP_001044899.2 UniGene:Os.14287
EnsemblPlants:LOC_Os01g64560.1 GeneID:4324795 KEGG:osa:4324795
Uniprot:Q5N9E6
Length = 904
Score = 90 (36.7 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 29/88 (32%), Positives = 43/88 (48%)
Query: 163 GHAYKSGRSIW-TSGIVS-CSDHYESRSFLAMS----AGFQTVVFVPA-KSGVVELGSVK 215
G A +G W IV C + E L M AG QT+ +P GV++LGS K
Sbjct: 120 GQAALTGLHRWIVHDIVDECEE--EDEVLLEMKGQFCAGIQTIAVIPVLPRGVIQLGSTK 177
Query: 216 LIPEEQNVVEMVKTVFEGSSSVQTKVFP 243
++ EE ++ V+++F+ S T V P
Sbjct: 178 MVMEEAAFIDHVRSLFQQLGS-STAVVP 204
Score = 81 (33.6 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 50 QRLCQVVEGSNWNYAIYWHASNLK-SGGSALIWGDGH 85
+RLC V W+YA++W A+ S L+WGDGH
Sbjct: 12 RRLCTDV---GWSYAVFWRATRAADSQRLKLVWGDGH 45
Score = 56 (24.8 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 352 REEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQ 403
R P + R+ + R LR +VPN +K +LL I ++ LQ
Sbjct: 693 RSRPGESARPRPKDRQMIQDRIKELREIVPNSAKCSIDTLLEKTIKHMLFLQ 744
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVL 409
H ++ER+RR+K+NQR L+ +VPN SK DKAS+L + I Y+ LQ ++ ++
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 22/52 (42%), Positives = 41/52 (78%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVL 409
H +E++RR K+N++ AL++++PN +K DKAS+L +AI Y+ LQ+++++L
Sbjct: 108 HNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 159
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 51/211 (24%), Positives = 92/211 (43%)
Query: 205 KSGVVELGSVKLIPEEQNVVEMVKTVFEGSSSVQTKV-FPKI-FGHELSLGGSKSQSIS- 261
K + LG +++P Q+ + K E ++ + K+ KI F +S +S +
Sbjct: 75 KKNIKILGDTQVVPVSQSKPQQDKETNEQMNNNKKKLKSSKIEFERNVSKSNKCVESSTL 134
Query: 262 INFSPKVED--ELNFASDSYEIQAIG-SNQVYGNSSNRCRSEDEAKLFPHLNQMIVGGFD 318
I+ S K E+ A + A+G S ++Y SS++ L + G +
Sbjct: 135 IDVSAKGPKNVEVTTAPPDEQSAAVGRSTELYFASSSKFSRGTSRDLSCCSLKRKYGDIE 194
Query: 319 AQARVSSLEQKDDSSPQXXXXXXXXXXXXXANGREEPLNHVEAERQRREKLNQRFYALRA 378
+ DD S + H ER+RR++ N++ AL+
Sbjct: 195 EEESTYLSNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQD 254
Query: 379 VVPNISKMDKASLLGDAITYITDLQMKIRVL 409
++PN K DKASLL +AI Y+ LQ++++++
Sbjct: 255 LLPNCYKDDKASLLDEAIKYMRTLQLQVQMM 285
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 124 (48.7 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 21/49 (42%), Positives = 37/49 (75%)
Query: 357 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMK 405
+H EAER+RR+++N LR +VP+ S+MDKA+LLG+ + ++ +L+ +
Sbjct: 22 SHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCR 70
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 23/52 (44%), Positives = 41/52 (78%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVL 409
H +ER+RR+++N+R AL+ ++P+ SK DKAS+L +AI Y+ LQ++++V+
Sbjct: 262 HNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 23/52 (44%), Positives = 41/52 (78%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVL 409
H +ER+RR+++N+R AL+ ++P+ S+ DKAS+L +AI Y+ LQM+++V+
Sbjct: 261 HNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVM 312
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 21/52 (40%), Positives = 42/52 (80%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVL 409
H +ER+RR+++N++ AL+ ++PN +K+DKAS+L +AI Y+ LQ++++++
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM 399
>UNIPROTKB|Q75IR0 [details] [associations]
symbol:OSJNBb0099P06.13 "Putative uncharacterized protein
OSJNBb0099P06.13" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR002912
InterPro:IPR011598 Pfam:PF00010 Pfam:PF01842 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0016597 GO:GO:0008152
EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC124144
EMBL:AC134341 EMBL:AK110619 RefSeq:NP_001054739.1 UniGene:Os.56950
EnsemblPlants:LOC_Os05g07120.1 EnsemblPlants:LOC_Os05g07120.2
GeneID:4337905 KEGG:osa:4337905 eggNOG:NOG309133
HOGENOM:HOG000241234 OMA:VSCDDRP ProtClustDB:CLSN2691085
Uniprot:Q75IR0
Length = 271
Score = 125 (49.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 41/159 (25%), Positives = 75/159 (47%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMSN 417
H EAER+RRE++N LR ++P+ +MDKA+LL + + L+ + T +
Sbjct: 70 HSEAERRRRERINAHLATLRRILPDAKQMDKATLLASVVNQVKHLKTRATEATTPSTAAT 129
Query: 418 --NKQKQISVPEIDFQPRHEDAV---VRVSCPLDDHP--VSSVMKTFSEHQIVAQESNVS 470
+ +++V + H A VR + DD P ++ + TF ++ +++S
Sbjct: 130 IPPEANEVTV-QCYAGGEHTAAARTYVRATVSCDDRPGLLADIAATFRRLRLRPLSADMS 188
Query: 471 TTEDKVIHTFSI-----QTQSGASEQ--LKEKLLAALSK 502
+ H F + + + A+E LKE + AL+K
Sbjct: 189 CLGGRTRHAFVLCREEEEEEDAAAEARPLKEAVRQALAK 227
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 106 (42.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 31/99 (31%), Positives = 51/99 (51%)
Query: 362 ERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLE--TEKDMSNNK 419
ER+RR N RF+ L+ ++PN +K +AS++ D I YI +LQ + L+ EK +
Sbjct: 28 ERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQRLVSELKYLVEKKKCGAR 87
Query: 420 QKQISVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFS 458
I E+D +++ + S +HP S TF+
Sbjct: 88 HNNI---EVD----NKNTIYGTS--KIEHPFSKNKNTFN 117
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 128 (50.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 22/52 (42%), Positives = 41/52 (78%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVL 409
H +ER+RR+++N++ AL+ +VP+ +K DKAS+L +AI Y+ LQM+++++
Sbjct: 233 HNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIM 284
>TAIR|locus:2152262 [details] [associations]
symbol:BIM3 "AT5G38860" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000070523 EMBL:AB009048 EMBL:AJ630499 EMBL:AY568671
EMBL:BT033131 IPI:IPI00534511 RefSeq:NP_198702.2 UniGene:At.50495
ProteinModelPortal:Q9FMB6 SMR:Q9FMB6 IntAct:Q9FMB6 PRIDE:Q9FMB6
EnsemblPlants:AT5G38860.1 GeneID:833877 KEGG:ath:AT5G38860
TAIR:At5g38860 eggNOG:NOG267159 InParanoid:Q9FMB6 OMA:TETRSFC
PhylomeDB:Q9FMB6 ProtClustDB:CLSN2918639 Genevestigator:Q9FMB6
Uniprot:Q9FMB6
Length = 298
Score = 125 (49.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 37/113 (32%), Positives = 56/113 (49%)
Query: 358 HVEAERQRREKLNQRFYALRAVVP---NISKMDKASLLGDAITYITDLQMKIRVLETEKD 414
H E E++RR K+N+RF +L ++P N K DKAS L + I YI LQ K+ + E
Sbjct: 38 HSETEQRRRSKINERFQSLMDIIPQNQNDQKRDKASFLLEVIEYIHFLQEKVHMYEDSHQ 97
Query: 415 MSNNKQKQISVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQES 467
M ++ I ++ H +DHP ++K+FS + VA S
Sbjct: 98 MWYQSPTKL----IPWRNSHGSVAEE-----NDHP--QIVKSFSSNDKVAASS 139
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 125 (49.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 35/108 (32%), Positives = 54/108 (50%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMSN 417
H AER+RREK+N+R L+ ++P +K K S+L D I Y+ L+M+I M
Sbjct: 155 HNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQINQFMPHMAMGM 214
Query: 418 NKQKQISVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQ 465
N Q +P F + A V S P +P ++ +TF ++ Q
Sbjct: 215 N-QPPAYIP---FPSQAHMAGVGPSYPPPRYPFPNI-QTFDPSRVWLQ 257
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 127 (49.8 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEK 413
H AER RREK+++R L+ +VPN +K DKAS+L + I Y+ LQ++++VL +
Sbjct: 250 HSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSR 305
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 129 (50.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 29/91 (31%), Positives = 53/91 (58%)
Query: 319 AQARVSSLEQKDDSSPQXXXXXXXXXXXXXANGREEPLNHVEAERQRREKLNQRFYALRA 378
AQA S+ Q DD + + E H +ER+RR+++N++ AL+
Sbjct: 281 AQAECSA-SQDDDLDDEPGVLRKSGTRSTKRSRTAEV--HNLSERRRRDRINEKMRALQE 337
Query: 379 VVPNISKMDKASLLGDAITYITDLQMKIRVL 409
++PN +K+DKAS+L +AI Y+ LQ++++++
Sbjct: 338 LIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 368
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 124 (48.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 24/56 (42%), Positives = 39/56 (69%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEK 413
H AER RRE++ +R +L+ +VPN +K DKAS+L + I Y+ LQ++++VL +
Sbjct: 110 HSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSR 165
>UNIPROTKB|Q5SMX4 [details] [associations]
symbol:P0498B01.36 "cDNA clone:J033115I17, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008207 EMBL:AP003417 EMBL:HQ858870
EMBL:AK102964 RefSeq:NP_001042293.1 UniGene:Os.32770 GeneID:4327325
KEGG:osa:4327325 eggNOG:NOG253236 OMA:GNNGFMC
ProtClustDB:CLSN2691168 Uniprot:Q5SMX4
Length = 439
Score = 128 (50.1 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 30/59 (50%), Positives = 40/59 (67%)
Query: 356 LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKD 414
L H+ +ER+RREKLN F AL+AV+P SK DK S+L A Y+ L+ K+ LE EK+
Sbjct: 253 LQHMISERKRREKLNDSFLALKAVLPPGSKKDKTSILIRAREYVKSLESKLSELE-EKN 310
Score = 41 (19.5 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 12/54 (22%), Positives = 26/54 (48%)
Query: 128 GLENYASRFDGVSGVEMFYLTSMYFNFRCDSAYGPGHAYKSGRSIWTSGIVSCS 181
G+++ ++ +DG S V++ + S + + + S + + S VSCS
Sbjct: 59 GMDDESAVYDGASMVDVLLMASSSPHHHAGAGSFQYSSPTSSSASFRSASVSCS 112
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 125 (49.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 35/118 (29%), Positives = 64/118 (54%)
Query: 357 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMS 416
+H EAER+RRE++N LR+++PN +K DKASLL + I ++ +L+ + + T+
Sbjct: 135 SHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQI-TDTYQV 193
Query: 417 NNKQKQISVPEIDFQPRHEDAVVRVS-CPLD--D--HPVSSVMKTFSEHQIVAQESNV 469
+ ++V + + + V+R S C D D H V + +K+ + A+ + V
Sbjct: 194 PTECDDLTV-DSSYNDEEGNLVIRASFCCQDRTDLMHDVINALKSLRLRTLKAEIATV 250
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 125 (49.1 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 21/52 (40%), Positives = 41/52 (78%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVL 409
H +E++RR ++N++ AL++++PN +K DKAS+L +AI Y+ LQ+++++L
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 124 (48.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEK 413
H AER RRE++ +R AL+ +VPN +K DKAS+L + I Y+ LQ++++VL +
Sbjct: 149 HSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSR 204
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 109 (43.4 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 19/60 (31%), Positives = 40/60 (66%)
Query: 356 LNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLGDAITYITDLQMKIRVLETEK 413
+ H+ ER RR ++N+ LR+++P + + D+AS++G AI ++ +L+ +++ LE +K
Sbjct: 90 MTHIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIVGGAIEFVKELEQQLQSLEAQK 149
Score = 58 (25.5 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 17/74 (22%), Positives = 33/74 (44%)
Query: 427 EIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVSTTEDKVIHTFSIQTQS 486
E+ H A VRV P + ++ ++ NV+T + V++T S++ +
Sbjct: 262 EVSLVETH--ASVRVMSPRRPGQLLKMIAGLQALRLTVLHLNVTTLDSLVLYTLSVKVEE 319
Query: 487 GASEQLKEKLLAAL 500
G S + + AA+
Sbjct: 320 GCSLTTVDDIAAAV 333
>TAIR|locus:2103560 [details] [associations]
symbol:AT3G56770 "AT3G56770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL390921 HOGENOM:HOG000006083 ProtClustDB:CLSN2683662
IPI:IPI00540753 PIR:T51265 RefSeq:NP_191236.1 UniGene:At.53958
ProteinModelPortal:Q9LET0 SMR:Q9LET0 EnsemblPlants:AT3G56770.1
GeneID:824844 KEGG:ath:AT3G56770 TAIR:At3g56770 eggNOG:NOG237033
InParanoid:Q9LET0 OMA:RRIIFKV PhylomeDB:Q9LET0
Genevestigator:Q9LET0 Uniprot:Q9LET0
Length = 230
Score = 119 (46.9 bits), Expect = 0.00011, P = 0.00011
Identities = 35/119 (29%), Positives = 63/119 (52%)
Query: 357 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMS 416
NH EAER+RR ++N LR ++ SK DK++LL + + +L K + LE +
Sbjct: 48 NHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKEL--KQQTLEITDETI 105
Query: 417 NNKQKQISVPEIDFQPRHEDA--VVRVSCPLDDHP--VSSVMKTFSEHQIVAQESNVST 471
++ +ISV I+ R +D + +VS +D P + +M+T Q+ ++++T
Sbjct: 106 PSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKSLQMETLFADMTT 164
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 126 (49.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 351 GREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLE 410
GR + H E+ER+RR+++NQR L+ ++P SK DK S+L D I ++ LQ +++ +
Sbjct: 165 GRAAAI-HNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMS 223
Query: 411 TEKDMSNNKQKQISVPEI 428
+ N +Q+ +P++
Sbjct: 224 ----LRANLPQQMMIPQL 237
Score = 38 (18.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 154 FRCDSAYGPGHAYKS 168
F+ S GP H Y+S
Sbjct: 60 FQLQSPNGPNHNYES 74
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 117 (46.2 bits), Expect = 0.00011, P = 0.00011
Identities = 22/60 (36%), Positives = 41/60 (68%)
Query: 356 LNHVEAERQRREKLNQRFYALRAVVP--NISKMDKASLLGDAITYITDLQMKIRVLETEK 413
++H+ ER RR ++N+ +LR++ P I + D+AS++G I +I +LQ ++VLE++K
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
>TAIR|locus:2164605 [details] [associations]
symbol:AT5G56960 "AT5G56960" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB024035 IPI:IPI00545938 RefSeq:NP_200506.1 UniGene:At.55597
ProteinModelPortal:Q9LTS4 SMR:Q9LTS4 EnsemblPlants:AT5G56960.1
GeneID:835798 KEGG:ath:AT5G56960 TAIR:At5g56960 eggNOG:NOG254434
HOGENOM:HOG000095216 InParanoid:Q9LTS4 OMA:RENATTH PhylomeDB:Q9LTS4
ProtClustDB:CLSN2687375 Genevestigator:Q9LTS4 Uniprot:Q9LTS4
Length = 466
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 33/87 (37%), Positives = 54/87 (62%)
Query: 356 LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKI-RVLETEKD 414
L H+ +ER+RREKLN+ F ALR+++P +K DKAS+L A ++ LQ +I ++LE ++
Sbjct: 288 LQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLERNRE 347
Query: 415 MSNNKQKQISVPEIDFQPRHEDAVVRV 441
+ + + E D +P E VR+
Sbjct: 348 VEAKLAGEREI-ENDLRPE-ERFNVRI 372
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 22/52 (42%), Positives = 40/52 (76%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVL 409
H +ER+RR+++N+R AL+ ++P +K DKAS+L +AI Y+ LQ++I+++
Sbjct: 289 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 24/70 (34%), Positives = 43/70 (61%)
Query: 356 LNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLGDAITYITDLQMKIRVLETEK 413
+NH+ ER RR ++N+ +LRA++P I + D+AS++G AI Y+ L+ I+ LE++K
Sbjct: 178 INHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQK 237
Query: 414 DMSNNKQKQI 423
++
Sbjct: 238 RTQQQSNSEV 247
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 30/94 (31%), Positives = 49/94 (52%)
Query: 319 AQARVSSLEQKDDSSPQXXXXXXXXXXXXXANGREEPLNHVEAERQRREKLNQRFYALRA 378
A A S + SP AN +E A + RRE++++R AL+
Sbjct: 164 AAASGSQRRARPPPSPLQGSELHEYSKKQRANNKE---TQSSAAKSRRERISERLRALQE 220
Query: 379 VVPNISKMDKASLLGDAITYITDLQMKIRVLETE 412
+VP+ K+D ++L AI+Y+ +QM++RVLET+
Sbjct: 221 LVPSGGKVDMVTMLDRAISYVKFMQMQLRVLETD 254
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 361 AERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMSNNKQ 420
A + RRE++++R L+ +VPN +K+D ++L AI+Y+ LQ++++VL T++
Sbjct: 211 AAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPAQGG 270
Query: 421 KQISVPEIDFQPRHEDAVVRVSCPL 445
K PEI DA++ S PL
Sbjct: 271 K---APEISQVKEALDAILSSSSPL 292
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 121 (47.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/89 (28%), Positives = 51/89 (57%)
Query: 353 EEPLNHVEAERQRREKLNQRFYALRAVVP--NISKMDKASLLGDAITYITDLQMKIRVLE 410
++ ++HV ER RR+++N+ LR+++P + + D+AS++G + YI++LQ ++ LE
Sbjct: 99 QQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLE 158
Query: 411 TEKDMSNNKQKQISVPEIDFQPRHEDAVV 439
+K ++ P + PR V+
Sbjct: 159 AKKQRKT--YAEVLSPRVVPSPRPSPPVL 185
Score = 41 (19.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 448 HPV-SSVMKTFSEHQIVAQES---NVSTTEDKVIHTFSIQTQSGASEQLKEKLLA 498
H + VMK + + +A E N++T ++ ++++F+I+ G QL + LA
Sbjct: 304 HKIPGQVMKIIAALEDLALEILQVNINTVDETMLNSFTIKI--GIECQLSAEELA 356
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 116 (45.9 bits), Expect = 0.00022, P = 0.00022
Identities = 21/50 (42%), Positives = 39/50 (78%)
Query: 363 RQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETE 412
R+RRE++N R L+++VPN +K+D +++L DA+ Y+ LQ++I++L +E
Sbjct: 148 RKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSE 197
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 22/74 (29%), Positives = 45/74 (60%)
Query: 356 LNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLGDAITYITDLQMKIRVLETEK 413
+ H+ ER RR ++N +LR+++P+ I + D+AS++G AI ++ L+ +++ LE +K
Sbjct: 193 MTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQK 252
Query: 414 DMSNNKQKQISVPE 427
+ + +PE
Sbjct: 253 RSQQSDDNKEQIPE 266
>UNIPROTKB|Q6Z339 [details] [associations]
symbol:B1121A12.20 "Os02g0726700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
EMBL:AP008208 EMBL:AP005284 RefSeq:NP_001047993.1 UniGene:Os.52592
GeneID:4330593 KEGG:osa:4330593 ProtClustDB:CLSN2919237
Uniprot:Q6Z339
Length = 344
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 34/107 (31%), Positives = 52/107 (48%)
Query: 324 SSLEQKD-DSSPQXXXXXXXXXXXXXAN-GREEPLN-HVEAERQRREKLNQRFYALRAVV 380
S+++Q+ +P A+ G P + H E++RR K+N R LR ++
Sbjct: 113 SAIDQRSIGQTPYEATRAEGRSSASSADQGPSTPRSKHSATEQRRRTKINDRLEILRELL 172
Query: 381 PNIS-KMDKASLLGDAITYITDLQMKIRVLETEKDMSNNKQKQISVP 426
P+ K DKAS L + I YI LQ K++ E E D N + S+P
Sbjct: 173 PHTDQKRDKASFLSEVIEYIRFLQEKVQKYE-EADPERNHEDSKSMP 218
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 115 (45.5 bits), Expect = 0.00031, P = 0.00031
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 356 LNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLGDAITYITDLQMKIRVLETEK 413
++H+ ER RR ++N LR++ P I + D+AS++G AI +I +LQ ++ LE +K
Sbjct: 1 MSHIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLEAQK 60
Query: 414 DMSNNKQKQISVP 426
Q + P
Sbjct: 61 KRRQQPQAHLISP 73
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 112 (44.5 bits), Expect = 0.00036, P = 0.00036
Identities = 20/46 (43%), Positives = 34/46 (73%)
Query: 364 QRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVL 409
+RR+++NQ+ L+ +VPN SK DKAS+L + I Y+ LQ +++V+
Sbjct: 12 KRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQVM 57
>UNIPROTKB|Q8S0C6 [details] [associations]
symbol:B1112D09.6 "Uncharacterized protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
HSSP:P01106 EMBL:AP003432 EMBL:AK106333
EnsemblPlants:LOC_Os01g39330.1 eggNOG:NOG273636 OMA:LNDSFHT
Uniprot:Q8S0C6
Length = 454
Score = 123 (48.4 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 356 LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDM 415
L H+ +ER+RREKLN F+ LR+++P SK DK ++L +A Y+ L+ +I TE +
Sbjct: 265 LYHMMSERKRREKLNDSFHTLRSLLPPCSKKDKTTVLINAAKYLKSLETEI----TELEG 320
Query: 416 SNNK-QKQIS 424
+N K +K I+
Sbjct: 321 TNTKLEKHIA 330
Score = 39 (18.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 310 NQMIVGGFDAQARVSSLEQKDDSS 333
++++ GG R+ +++ DD S
Sbjct: 55 DELMAGGSSGDTRMVAMDDGDDGS 78
>UNIPROTKB|Q6ZBQ2 [details] [associations]
symbol:P0605H02.26 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 ProtClustDB:CLSN2697427 EMBL:HQ858865 EMBL:AP004620
EMBL:AK100183 RefSeq:NP_001062109.1 UniGene:Os.5093 STRING:Q6ZBQ2
EnsemblPlants:LOC_Os08g38210.1 GeneID:4345899 KEGG:osa:4345899
OMA:KPTHDFL Uniprot:Q6ZBQ2
Length = 508
Score = 120 (47.3 bits), Expect = 0.00044, P = 0.00044
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 358 HVEAERQRREKLNQRFYALRAVVP-NISKMDKASLLGDAITYITDLQMKIRVLETEKDMS 416
H E++RR K+N RF LR ++P N K DKAS L + I YI LQ K++ E
Sbjct: 226 HSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEVSYPEW 285
Query: 417 NNKQKQISVP--EIDFQPRHEDAVVRVSCPLDDHP 449
N + ++ VP I F+ ++A + P D P
Sbjct: 286 NQENAKV-VPWTNIYFRSSWKNAQNKGQVPADHSP 319
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 28/102 (27%), Positives = 52/102 (50%)
Query: 315 GGFDAQARVSSLEQKDDSSPQXXXXXXXXXXXXXANGREEPLNHVEAERQRREKLNQRFY 374
GG + +QK SS +G + ++H+ ER RR+++N+
Sbjct: 93 GGGGGGGPPAQKKQKGSSS-SSSSPAALAAAVGDGDGAAK-MSHITVERNRRKQMNEHLA 150
Query: 375 ALRAVVP--NISKMDKASLLGDAITYITDLQMKIRVLETEKD 414
LR+++P + + D+AS++G + YI +LQ +R LE +K+
Sbjct: 151 VLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLEAKKN 192
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 119 (46.9 bits), Expect = 0.00059, P = 0.00059
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEK 413
H AER RREK++ R L+ +VPN +K +KAS+L + I Y+ LQ++++VL +
Sbjct: 325 HSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKVLSMSR 380
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 115 (45.5 bits), Expect = 0.00060, P = 0.00060
Identities = 21/56 (37%), Positives = 39/56 (69%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEK 413
H AER RRE++ +R AL+ +VPN +K D+A++L + + Y+ L+++++VL +
Sbjct: 144 HSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSR 199
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 117 (46.2 bits), Expect = 0.00063, P = 0.00063
Identities = 33/118 (27%), Positives = 55/118 (46%)
Query: 330 DDSSPQXXXX--XXXXXXXXXANGREEPLNHVEAERQRREKLNQRFYALRAVVP--NISK 385
DD SPQ A H+ ER RR+++N+ LR+++P + +
Sbjct: 109 DDGSPQKRRKCCSPESSTTDVAAATTPKTAHIAVERNRRKQMNENLAVLRSLMPCFYVKR 168
Query: 386 MDKASLLGDAITYITDLQMKIRVLETEKDMSNNKQKQISVPEIDFQPRHEDAVVRVSC 443
D+AS++G + YI +LQ + LE +K Q+++ ++ PR A V SC
Sbjct: 169 GDQASIIGGVVDYIKELQQVLHSLEAKK------QRKVYTDQV-LSPR-PPATVAASC 218
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 116 (45.9 bits), Expect = 0.00064, P = 0.00064
Identities = 21/47 (44%), Positives = 35/47 (74%)
Query: 357 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQ 403
+H EAER+RR+++N LR+++PN +K DKASLL + I ++ +L+
Sbjct: 124 SHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELK 170
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 115 (45.5 bits), Expect = 0.00065, P = 0.00065
Identities = 26/90 (28%), Positives = 49/90 (54%)
Query: 325 SLEQKDDSSPQXXXXXXXXXXXXXANGREEPLNHVEA-ERQRREKLNQRFYALRAVVPNI 383
S+ D SS Q GR + R+RRE++N+R L+ +VPN
Sbjct: 193 SISDNDSSSSQEVADAGATSKGKSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNG 252
Query: 384 SKMDKASLLGDAITYITDLQMKIRVLETEK 413
+K+D +++L +A+ Y+ LQ++I++L +++
Sbjct: 253 TKVDISTMLEEAVHYVKFLQLQIKLLSSDE 282
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 101 (40.6 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 18/65 (27%), Positives = 43/65 (66%)
Query: 356 LNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLGDAITYITDLQMKIRVLETEK 413
+ H+ ER RR+++N+ LR+++P+ + D+AS++G AI Y+ +L+ ++ +E ++
Sbjct: 115 MTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKR 174
Query: 414 DMSNN 418
+++
Sbjct: 175 TRTHD 179
Score = 55 (24.4 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 13/90 (14%), Positives = 39/90 (43%)
Query: 413 KDMSNNKQKQISVPEIDFQPRHEDAVVRVSCPLDDHPVSSVMKTFSEHQIVAQESNVSTT 472
K S+ + S EI+ A +++ + ++ + ++ NV+T
Sbjct: 206 KSSSDVPESSSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTL 265
Query: 473 EDKVIHTFSIQTQSGASEQLKEKLLAALSK 502
+ ++++ S++ + G+ + + AL++
Sbjct: 266 HNSILYSISVRVEEGSQLNTVDDIATALNQ 295
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 116 (45.9 bits), Expect = 0.00070, P = 0.00070
Identities = 21/47 (44%), Positives = 35/47 (74%)
Query: 357 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQ 403
+H EAER+RR+++N LR+++PN +K DKASLL + I ++ +L+
Sbjct: 109 SHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELK 155
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 116 (45.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 358 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVL 409
H +ER+RRE++N+R L+ ++P K DK S+L D I Y+ LQ++I+++
Sbjct: 362 HNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMM 413
Score = 46 (21.3 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 216 LIPEEQNVVEMVKTVFEGSSSVQTK--VFPKIFGHELSLGGSKS 257
+ P E +VVE++ + S+QT+ + P IF S GG ++
Sbjct: 104 IAPSEDDVVELLWKSGQVVQSIQTQRPIPPPIFRGSGSGGGEET 147
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 117 (46.2 bits), Expect = 0.00080, P = 0.00080
Identities = 24/59 (40%), Positives = 40/59 (67%)
Query: 362 ERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLETEKDMSNNKQ 420
ER+RR N RF+ L+ ++PN +K+D+AS++G+AI YI +L +R +E K + K+
Sbjct: 252 ERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKEL---LRTIEEFKMLVEKKR 307
>UNIPROTKB|Q9FTQ1 [details] [associations]
symbol:P0665D10.21 "DNA binding protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002861 EMBL:AP002745 RefSeq:NP_001042409.1 UniGene:Os.26488
STRING:Q9FTQ1 GeneID:4324583 KEGG:osa:4324583 OMA:VRFTFLI
ProtClustDB:CLSN2691217 Uniprot:Q9FTQ1
Length = 267
Score = 113 (44.8 bits), Expect = 0.00081, P = 0.00081
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 351 GREEPL-----NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQ 403
GREE +H EAER+RRE++N LR +VP KMDKA+LL + + ++ L+
Sbjct: 70 GREEKAAMALKSHSEAERRRRERINAHLATLRTMVPCTDKMDKAALLAEVVGHVKKLK 127
>UNIPROTKB|Q8H7N8 [details] [associations]
symbol:OJ1217B09.8 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC121489
EMBL:HQ858866 EMBL:AK107555 RefSeq:NP_001049217.1 UniGene:Os.31303
STRING:Q8H7N8 EnsemblPlants:LOC_Os03g08930.1 GeneID:4331887
KEGG:dosa:Os10t0376900-01 KEGG:osa:4331887 OMA:RIPPLHL
ProtClustDB:CLSN2693619 Uniprot:Q8H7N8
Length = 329
Score = 115 (45.5 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 22/64 (34%), Positives = 42/64 (65%)
Query: 356 LNHVEAERQRREKLNQRFYALRAVVP-NISKM-DKASLLGDAITYITDLQMKIRVLETEK 413
+ H+ ER RR ++N+ LR+++P + S+ D+AS++G AI Y+ +L+ ++ LE +K
Sbjct: 111 MTHIAVERNRRRQMNEYLAVLRSLMPASYSQRGDQASIVGGAINYVKELEQLLQSLEVQK 170
Query: 414 DMSN 417
+ N
Sbjct: 171 SLKN 174
Score = 40 (19.1 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 468 NVSTTEDKVIHTFSIQTQSGASEQLKEKLLAAL 500
NV+T + V+++FS++ + + E + A+
Sbjct: 280 NVTTVDAMVLYSFSLKVEDDSKLGSVEDIATAV 312
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 114 (45.2 bits), Expect = 0.00096, P = 0.00096
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 356 LNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLGDAITYITDLQMKIRVLETEK 413
+ H+ ER RR ++NQ LR+++P K D+AS++G AI +I +L+ K+ LE +K
Sbjct: 88 MTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQK 147
Query: 414 DMSNNKQKQ 422
N K Q
Sbjct: 148 H-HNAKLNQ 155
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.373 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 502 460 0.00095 118 3 11 23 0.43 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 103
No. of states in DFA: 619 (66 KB)
Total size of DFA: 281 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.10u 0.09s 38.19t Elapsed: 00:00:07
Total cpu time: 38.11u 0.09s 38.20t Elapsed: 00:00:07
Start: Sat May 11 06:50:52 2013 End: Sat May 11 06:50:59 2013
WARNINGS ISSUED: 1