Query 010729
Match_columns 502
No_of_seqs 153 out of 749
Neff 4.4
Searched_HMMs 13730
Date Mon Mar 25 13:01:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010729.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010729hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d4sgbi_ g.69.1.1 (I:) Plant ch 43.7 3.2 0.00023 29.8 0.8 9 268-276 27-35 (51)
2 d1tiha_ g.69.1.1 (A:) Multidom 38.1 4.5 0.00033 29.1 0.8 9 268-276 28-36 (53)
3 d1pjua1 g.69.1.1 (A:16-74) Wou 26.8 7.1 0.00052 28.6 0.3 9 268-276 36-44 (59)
4 d1oyvi_ g.69.1.1 (I:) Wound-in 19.6 14 0.001 30.2 0.7 9 268-276 51-59 (116)
5 d1ucsa_ b.85.1.1 (A:) Type III 17.4 20 0.0014 26.7 1.1 20 256-275 38-58 (64)
6 d1yuaa2 g.41.3.3 (A:66-122) Pr 16.7 21 0.0015 26.1 1.0 11 267-277 10-21 (57)
7 d1lkta_ b.90.1.1 (A:) Head-bin 15.9 25 0.0018 28.3 1.4 29 247-275 11-39 (104)
8 d1jhfa1 a.4.5.2 (A:2-72) LexA 14.0 30 0.0022 25.4 1.3 23 417-439 10-33 (71)
9 d1wjra_ b.34.9.3 (A:) Scm-like 13.8 21 0.0015 29.3 0.4 20 261-284 17-41 (127)
10 d1bqka_ b.6.1.1 (A:) Pseudoazu 13.8 22 0.0016 28.8 0.5 39 256-303 84-122 (124)
No 1
>d4sgbi_ g.69.1.1 (I:) Plant chymotrypsin inhibitor {Potato tuber (Solanum tuberosum) [TaxId: 4113]}
Probab=43.71 E-value=3.2 Score=29.80 Aligned_cols=9 Identities=33% Similarity=0.936 Sum_probs=7.6
Q ss_pred CCCCCCccc
Q 010729 268 EDDPRNPAV 276 (502)
Q Consensus 268 EDDPRNPAV 276 (502)
|.|||||-.
T Consensus 27 eSdp~npka 35 (51)
T d4sgbi_ 27 QSDPKKPKA 35 (51)
T ss_dssp CBCTTSCCC
T ss_pred CCCCCCCCc
Confidence 889999954
No 2
>d1tiha_ g.69.1.1 (A:) Multidomain proteinase inhibitor {Winged tobacco (Nicotiana alata) [TaxId: 4087]}
Probab=38.09 E-value=4.5 Score=29.12 Aligned_cols=9 Identities=67% Similarity=1.191 Sum_probs=7.6
Q ss_pred CCCCCCccc
Q 010729 268 EDDPRNPAV 276 (502)
Q Consensus 268 EDDPRNPAV 276 (502)
|.|||||-.
T Consensus 28 esdp~nPK~ 36 (53)
T d1tiha_ 28 ESDPRNPKA 36 (53)
T ss_dssp CCCSSSSCC
T ss_pred CCCCCCCCc
Confidence 889999964
No 3
>d1pjua1 g.69.1.1 (A:16-74) Wound-induced proteinase inhibitor-II {Tomato (Lycopersicon esculentum) [TaxId: 4081]}
Probab=26.83 E-value=7.1 Score=28.58 Aligned_cols=9 Identities=44% Similarity=0.992 Sum_probs=7.4
Q ss_pred CCCCCCccc
Q 010729 268 EDDPRNPAV 276 (502)
Q Consensus 268 EDDPRNPAV 276 (502)
|.|||||-.
T Consensus 36 esdp~npka 44 (59)
T d1pjua1 36 ESDPKRPNA 44 (59)
T ss_dssp CBBTTBCCE
T ss_pred cCCCCCCCc
Confidence 789999964
No 4
>d1oyvi_ g.69.1.1 (I:) Wound-induced proteinase inhibitor-II {Tomato (Lycopersicon esculentum) [TaxId: 4081]}
Probab=19.59 E-value=14 Score=30.22 Aligned_cols=9 Identities=44% Similarity=0.992 Sum_probs=7.0
Q ss_pred CCCCCCccc
Q 010729 268 EDDPRNPAV 276 (502)
Q Consensus 268 EDDPRNPAV 276 (502)
|.|||||-.
T Consensus 51 esdp~nPKa 59 (116)
T d1oyvi_ 51 ESDPKRPNA 59 (116)
T ss_dssp CBCSSSCCE
T ss_pred ccCCCCCCc
Confidence 788999854
No 5
>d1ucsa_ b.85.1.1 (A:) Type III antifreeze protein, AFP III {Antarctic eel pout (Lycodichthys dearborni), RD1 isoform [TaxId: 8201]}
Probab=17.39 E-value=20 Score=26.75 Aligned_cols=20 Identities=35% Similarity=0.552 Sum_probs=16.2
Q ss_pred cccccc-cccCCCCCCCCCcc
Q 010729 256 ADLVGK-VERNIPEDDPRNPA 275 (502)
Q Consensus 256 ADLVGK-VEagIPEDDPRNPA 275 (502)
-||||| |-..++||+|=-|.
T Consensus 38 ~~iVGkqvn~~V~edetim~~ 58 (64)
T d1ucsa_ 38 PKLVGMQVNRAVPLGTTLMPD 58 (64)
T ss_dssp HHHTTCBBSSCBCTTCBCCGG
T ss_pred HHHHhHHHhccccCCCccchh
Confidence 378998 77899999987663
No 6
>d1yuaa2 g.41.3.3 (A:66-122) Prokaryotic DNA topoisomerase I, a C-terminal fragment {Escherichia coli [TaxId: 562]}
Probab=16.72 E-value=21 Score=26.05 Aligned_cols=11 Identities=36% Similarity=0.951 Sum_probs=7.9
Q ss_pred CCCCCC-Ccccc
Q 010729 267 PEDDPR-NPAVI 277 (502)
Q Consensus 267 PEDDPR-NPAVI 277 (502)
|+-||- ||+||
T Consensus 10 P~~D~dGn~~vv 21 (57)
T d1yuaa2 10 PQQDPEGNKTMV 21 (57)
T ss_dssp CSSCTTCCCEEE
T ss_pred CccCCCCCEeEE
Confidence 666665 89987
No 7
>d1lkta_ b.90.1.1 (A:) Head-binding domain of phage P22 tailspike protein {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=15.92 E-value=25 Score=28.31 Aligned_cols=29 Identities=34% Similarity=0.454 Sum_probs=23.7
Q ss_pred ccccccccccccccccccCCCCCCCCCcc
Q 010729 247 IYTKAADVGADLVGKVERNIPEDDPRNPA 275 (502)
Q Consensus 247 IYTKAADVGADLVGKVEagIPEDDPRNPA 275 (502)
+||-+-.-=++--||+=-|=..-|||||+
T Consensus 11 ~ftm~r~F~~~~~GKiYIGk~~TDP~~p~ 39 (104)
T d1lkta_ 11 IFTESRSFKAVANGKIYIGQIDTDPVNPA 39 (104)
T ss_dssp CCBCSSSSCBCTTEEEEEESTTSCTTSGG
T ss_pred hhcccHHHHhhcCCcEEEecCCCCCCCcc
Confidence 46666666678889999999999999996
No 8
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=13.97 E-value=30 Score=25.35 Aligned_cols=23 Identities=4% Similarity=0.080 Sum_probs=18.9
Q ss_pred HHHhhhhhcccCCCcc-hHHHHHH
Q 010729 417 IIGFVTEYYTSNAYRY-IFKRSIR 439 (502)
Q Consensus 417 lIg~iTEYYTs~~y~P-Vr~IA~~ 439 (502)
+.-+|.+||..+.|.| +||||+.
T Consensus 10 vL~~I~~~~~~~G~~Ps~rei~~~ 33 (71)
T d1jhfa1 10 VFDLIRDHISQTGMPPTRAEIAQR 33 (71)
T ss_dssp HHHHHHHHHHHHSSCCCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHH
Confidence 4568899999999988 6888875
No 9
>d1wjra_ b.34.9.3 (A:) Scm-like with four MBT domains protein 2, SFMBT2 (KIAA1617) {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.85 E-value=21 Score=29.33 Aligned_cols=20 Identities=30% Similarity=0.491 Sum_probs=14.8
Q ss_pred ccccCCCCCCCCC-----cccccccccCc
Q 010729 261 KVERNIPEDDPRN-----PAVIADNVGDN 284 (502)
Q Consensus 261 KVEagIPEDDPRN-----PAVIADNVGDN 284 (502)
|+|+ -||+| ||+|.+++|+.
T Consensus 17 kLEa----vdp~~~~~i~vAtV~~v~g~~ 41 (127)
T d1wjra_ 17 LIEL----QDSQNPFQYWIVSVIENVGGR 41 (127)
T ss_dssp EEEE----ECSSCSSCEEEEECCCEETTE
T ss_pred EEEE----EcCCCCCeEEEEEEEEEECCE
Confidence 7888 45666 78888888765
No 10
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]}
Probab=13.79 E-value=22 Score=28.82 Aligned_cols=39 Identities=15% Similarity=0.216 Sum_probs=31.3
Q ss_pred cccccccccCCCCCCCCCcccccccccCcccccccccchhhHhhHHHH
Q 010729 256 ADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESS 303 (502)
Q Consensus 256 ADLVGKVEagIPEDDPRNPAVIADNVGDNVGDvAGMGADLFESy~~si 303 (502)
+-.+|+|--| |||.|+.=+++. ...+++.|.||++..++
T Consensus 84 ~GM~G~IvVg---d~~~n~~~~~~~------~~~~~s~~~~~~~~~~~ 122 (124)
T d1bqka_ 84 MGMVGVVQVG---DAPANLEAVKGA------KNPKKAQERLDAALAAL 122 (124)
T ss_dssp GTCEEEEEES---SSCTTHHHHHTC------CCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEC---CCCCCHHHHhhc------cccHHHHHHHHHHHHHh
Confidence 4588888775 899998888876 67889999999987653
Done!