Query         010730
Match_columns 502
No_of_seqs    370 out of 2045
Neff          6.0 
Searched_HMMs 46136
Date          Fri Mar 29 03:54:46 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010730.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010730hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0584 Serine/threonine prote 100.0 4.5E-64 9.8E-69  535.0  25.0  453    1-486   124-621 (632)
  2 KOG0615 Serine/threonine prote 100.0 4.8E-39   1E-43  330.0   8.5  178    1-180   257-443 (475)
  3 KOG0581 Mitogen-activated prot 100.0 9.8E-38 2.1E-42  317.5  15.1  176    1-180   159-341 (364)
  4 KOG0588 Serine/threonine prote 100.0 1.6E-37 3.4E-42  333.0  11.7  178    1-184    93-273 (786)
  5 KOG0598 Ribosomal protein S6 k 100.0 1.6E-36 3.5E-41  308.4  15.5  180    1-185   106-292 (357)
  6 KOG0592 3-phosphoinositide-dep 100.0   2E-36 4.3E-41  319.0  16.5  179    1-185   155-349 (604)
  7 KOG0575 Polo-like serine/threo 100.0 2.9E-36 6.2E-41  321.7  16.7  174    1-180    99-275 (592)
  8 KOG0616 cAMP-dependent protein 100.0 2.6E-36 5.6E-41  299.7  13.9  178    1-186   125-309 (355)
  9 KOG0583 Serine/threonine prote 100.0 1.1E-35 2.5E-40  310.9  18.1  175    1-180   101-281 (370)
 10 KOG0599 Phosphorylase kinase g 100.0   9E-36   2E-40  293.1  10.7  175    1-179   104-288 (411)
 11 KOG0198 MEKK and related serin 100.0 2.8E-35 6.1E-40  300.4  13.3  178    1-181    97-283 (313)
 12 KOG0033 Ca2+/calmodulin-depend 100.0 4.6E-35   1E-39  284.6  14.0  177    1-180    91-273 (355)
 13 KOG0578 p21-activated serine/t 100.0 1.9E-34 4.1E-39  305.7  15.2  175    1-179   351-528 (550)
 14 KOG0605 NDR and related serine 100.0 3.9E-34 8.5E-39  301.6  16.1  182    1-186   222-457 (550)
 15 KOG0604 MAP kinase-activated p 100.0 2.4E-33 5.2E-38  278.9  13.2  181    1-183   140-331 (400)
 16 KOG0591 NIMA (never in mitosis 100.0 6.1E-33 1.3E-37  274.2  11.6  170    1-172   101-279 (375)
 17 cd05571 STKc_PKB Catalytic dom 100.0 2.8E-32 6.2E-37  276.9  16.2  176    1-182    76-259 (323)
 18 KOG0694 Serine/threonine prote 100.0 1.5E-32 3.2E-37  296.4  13.0  178    1-185   450-635 (694)
 19 cd05612 STKc_PRKX_like Catalyt 100.0 8.7E-32 1.9E-36  268.9  16.3  174    1-182    82-262 (291)
 20 KOG0032 Ca2+/calmodulin-depend 100.0 1.1E-31 2.3E-36  281.9  17.6  176    1-180   117-299 (382)
 21 PTZ00263 protein kinase A cata 100.0 1.1E-31 2.4E-36  273.6  16.7  175    1-183    99-280 (329)
 22 cd05585 STKc_YPK1_like Catalyt 100.0 1.2E-31 2.6E-36  270.7  16.8  175    1-181    74-254 (312)
 23 KOG0661 MAPK related serine/th 100.0 8.9E-32 1.9E-36  280.5  15.3  174    5-181    94-298 (538)
 24 KOG0595 Serine/threonine-prote 100.0 7.7E-32 1.7E-36  277.0  14.4  178    1-181    90-275 (429)
 25 cd05628 STKc_NDR1 Catalytic do 100.0   2E-31 4.4E-36  275.2  17.3  180    1-184    82-303 (363)
 26 cd05590 STKc_nPKC_eta Catalyti 100.0 2.4E-31 5.2E-36  270.1  16.7  176    1-182    77-261 (320)
 27 PTZ00426 cAMP-dependent protei 100.0 1.9E-31 4.2E-36  274.3  16.0  175    1-183   112-293 (340)
 28 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.5E-31 5.5E-36  270.8  16.1  178    1-182    82-293 (350)
 29 cd05593 STKc_PKB_gamma Catalyt 100.0 3.2E-31   7E-36  270.4  16.4  176    1-182    76-259 (328)
 30 cd05599 STKc_NDR_like Catalyti 100.0   3E-31 6.6E-36  272.7  16.3  178    1-182    82-304 (364)
 31 cd05631 STKc_GRK4 Catalytic do 100.0 4.3E-31 9.3E-36  262.8  16.6  179    1-184    81-271 (285)
 32 KOG4717 Serine/threonine prote 100.0 2.2E-31 4.7E-36  278.9  14.6  176    3-183   100-279 (864)
 33 KOG0582 Ste20-like serine/thre 100.0   2E-31 4.2E-36  276.3  14.0  179    1-182   105-301 (516)
 34 cd05594 STKc_PKB_alpha Catalyt 100.0 2.5E-31 5.4E-36  269.9  14.6  175    1-181    76-259 (325)
 35 cd05616 STKc_cPKC_beta Catalyt 100.0 4.3E-31 9.2E-36  268.0  16.0  176    1-182    82-265 (323)
 36 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.9E-31 1.1E-35  268.3  16.3  176    1-182    82-265 (333)
 37 cd05575 STKc_SGK Catalytic dom 100.0 4.9E-31 1.1E-35  267.6  16.0  176    1-182    77-259 (323)
 38 cd05591 STKc_nPKC_epsilon Cata 100.0 6.4E-31 1.4E-35  266.5  16.8  176    1-182    77-262 (321)
 39 KOG0192 Tyrosine kinase specif 100.0 6.3E-31 1.4E-35  274.2  17.1  171    1-173   121-298 (362)
 40 cd05587 STKc_cPKC Catalytic do 100.0 7.5E-31 1.6E-35  266.3  17.2  176    1-182    82-265 (324)
 41 cd05595 STKc_PKB_beta Catalyti 100.0 5.6E-31 1.2E-35  267.8  16.2  176    1-182    76-259 (323)
 42 cd05620 STKc_nPKC_delta Cataly 100.0 6.8E-31 1.5E-35  266.4  16.5  175    1-181    77-255 (316)
 43 cd05586 STKc_Sck1_like Catalyt 100.0 1.9E-31   4E-36  271.1  12.3  176    1-181    77-260 (330)
 44 cd05614 STKc_MSK2_N N-terminal 100.0   6E-31 1.3E-35  267.2  15.9  177    1-182    86-275 (332)
 45 cd05601 STKc_CRIK Catalytic do 100.0 7.7E-31 1.7E-35  266.2  16.4  179    1-183    82-272 (330)
 46 cd05592 STKc_nPKC_theta_delta  100.0 1.1E-30 2.4E-35  264.9  16.9  176    1-182    77-256 (316)
 47 cd05584 STKc_p70S6K Catalytic  100.0 1.3E-30 2.7E-35  264.9  17.4  176    1-182    81-264 (323)
 48 cd05629 STKc_NDR_like_fungal C 100.0 8.3E-31 1.8E-35  271.7  16.3  178    1-182    82-313 (377)
 49 cd05627 STKc_NDR2 Catalytic do 100.0   5E-31 1.1E-35  271.7  14.3  180    1-184    82-303 (360)
 50 PTZ00284 protein kinase; Provi 100.0 1.1E-30 2.4E-35  279.3  17.1  178    3-184   214-448 (467)
 51 KOG0612 Rho-associated, coiled 100.0 6.5E-31 1.4E-35  294.5  15.5  190    1-194   156-361 (1317)
 52 cd05588 STKc_aPKC Catalytic do 100.0 1.3E-30 2.9E-35  265.6  16.5  177    1-182    77-270 (329)
 53 cd07862 STKc_CDK6 Catalytic do 100.0 1.7E-30 3.6E-35  257.4  16.6  170    4-177    92-290 (290)
 54 cd05598 STKc_LATS Catalytic do 100.0 2.4E-30 5.1E-35  267.9  17.9  177    1-181    82-308 (376)
 55 PTZ00036 glycogen synthase kin 100.0 1.1E-30 2.5E-35  278.1  15.9  175    4-180   150-357 (440)
 56 cd05619 STKc_nPKC_theta Cataly 100.0 1.8E-30 3.9E-35  263.5  16.6  176    1-182    77-256 (316)
 57 cd05625 STKc_LATS1 Catalytic d 100.0 1.6E-30 3.5E-35  270.0  16.5  178    1-182    82-313 (382)
 58 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.4E-30 5.2E-35  263.6  16.4  178    1-183    77-269 (327)
 59 cd05570 STKc_PKC Catalytic dom 100.0 2.3E-30   5E-35  262.4  16.2  176    1-182    77-260 (318)
 60 KOG0660 Mitogen-activated prot 100.0 8.2E-31 1.8E-35  266.2  12.8  174    4-180   109-316 (359)
 61 KOG0610 Putative serine/threon 100.0 3.4E-30 7.3E-35  265.2  17.5  189    1-193   158-414 (459)
 62 cd05596 STKc_ROCK Catalytic do 100.0 2.9E-30 6.3E-35  268.3  17.3  177    1-182   124-312 (370)
 63 KOG0201 Serine/threonine prote 100.0 1.3E-31 2.9E-36  277.1   6.9  174    1-179    92-268 (467)
 64 cd05602 STKc_SGK1 Catalytic do 100.0 1.9E-30   4E-35  263.6  15.2  176    1-182    77-259 (325)
 65 cd05618 STKc_aPKC_iota Catalyt 100.0 2.8E-30   6E-35  263.6  16.6  177    1-182    77-270 (329)
 66 KOG0690 Serine/threonine prote 100.0 4.1E-31 8.9E-36  265.1   9.6  178    1-184   249-434 (516)
 67 cd05604 STKc_SGK3 Catalytic do 100.0 1.8E-30 3.8E-35  263.7  14.4  175    1-181    77-258 (325)
 68 KOG0593 Predicted protein kina 100.0 9.7E-31 2.1E-35  260.7  11.5  170    6-178    86-288 (396)
 69 cd07848 STKc_CDKL5 Catalytic d 100.0 4.2E-30 9.1E-35  254.1  15.8  174    1-177    81-287 (287)
 70 cd05589 STKc_PKN Catalytic dom 100.0 5.7E-30 1.2E-34  259.9  16.8  174    1-181    83-264 (324)
 71 cd05603 STKc_SGK2 Catalytic do 100.0 3.9E-30 8.4E-35  260.5  15.5  176    1-182    77-259 (321)
 72 KOG4279 Serine/threonine prote 100.0 1.2E-30 2.6E-35  280.2  12.3  181    2-184   654-842 (1226)
 73 cd05626 STKc_LATS2 Catalytic d 100.0 8.2E-30 1.8E-34  265.1  18.2  178    1-182    82-313 (381)
 74 cd05582 STKc_RSK_N N-terminal  100.0 2.1E-30 4.6E-35  262.1  13.4  175    1-181    79-261 (318)
 75 cd05615 STKc_cPKC_alpha Cataly 100.0 6.9E-30 1.5E-34  259.8  17.2  176    1-182    82-265 (323)
 76 cd05621 STKc_ROCK2 Catalytic d 100.0 6.1E-30 1.3E-34  266.3  17.2  176    1-181   124-311 (370)
 77 KOG0597 Serine-threonine prote 100.0 1.3E-30 2.8E-35  275.7  12.0  171    4-180    84-257 (808)
 78 KOG0585 Ca2+/calmodulin-depend 100.0 1.3E-30 2.7E-35  271.8  11.2  162   17-182   207-380 (576)
 79 KOG0658 Glycogen synthase kina 100.0 1.6E-30 3.5E-35  264.4  11.6  176    5-182   106-314 (364)
 80 cd07859 STKc_TDY_MAPK_plant Ca 100.0 7.1E-30 1.5E-34  258.2  16.3  175    4-181    87-297 (338)
 81 cd06649 PKc_MEK2 Catalytic dom 100.0   1E-29 2.2E-34  259.1  17.4  177    1-181    84-308 (331)
 82 KOG0589 Serine/threonine prote 100.0 1.7E-30 3.7E-35  272.9  11.8  175    1-180    85-264 (426)
 83 cd05608 STKc_GRK1 Catalytic do 100.0 9.2E-30   2E-34  252.6  16.1  179    1-184    74-267 (280)
 84 cd07863 STKc_CDK4 Catalytic do 100.0 1.2E-29 2.6E-34  250.5  16.5  170    4-177    90-288 (288)
 85 cd05623 STKc_MRCK_alpha Cataly 100.0 1.4E-29   3E-34  258.2  17.2  178    1-182    82-274 (332)
 86 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.1E-29 2.4E-34  254.4  15.9  174    4-180    86-294 (303)
 87 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.1E-29 2.3E-34  253.1  15.4  170    4-177    86-288 (288)
 88 cd05622 STKc_ROCK1 Catalytic d 100.0   2E-29 4.4E-34  262.2  17.5  176    1-181   124-311 (371)
 89 KOG0594 Protein kinase PCTAIRE 100.0 1.3E-29 2.9E-34  257.0  15.3  175    4-181   100-309 (323)
 90 KOG0600 Cdc2-related protein k 100.0 1.3E-29 2.8E-34  265.9  15.6  171    6-179   203-405 (560)
 91 KOG0663 Protein kinase PITSLRE 100.0 2.4E-29 5.3E-34  253.3  16.2  188    5-195   161-384 (419)
 92 cd06625 STKc_MEKK3_like Cataly 100.0 4.6E-29   1E-33  242.4  17.8  173    1-177    85-263 (263)
 93 cd05597 STKc_DMPK_like Catalyt 100.0 4.4E-29 9.5E-34  254.7  18.0  178    1-182    82-274 (331)
 94 cd07868 STKc_CDK8 Catalytic do 100.0   3E-29 6.4E-34  252.2  16.5  173    3-177    82-317 (317)
 95 KOG0611 Predicted serine/threo 100.0 1.3E-29 2.8E-34  259.8  14.0  174    1-181   134-310 (668)
 96 KOG0614 cGMP-dependent protein 100.0 6.7E-30 1.5E-34  267.6  12.0  180    2-185   502-688 (732)
 97 cd07876 STKc_JNK2 Catalytic do 100.0 3.4E-29 7.3E-34  257.7  17.1  171    4-179   109-320 (359)
 98 cd07875 STKc_JNK1 Catalytic do 100.0 5.1E-29 1.1E-33  256.8  18.3  170    4-179   112-323 (364)
 99 KOG0659 Cdk activating kinase  100.0 3.5E-29 7.6E-34  245.9  16.0  171    6-179    86-286 (318)
100 cd05633 STKc_GRK3 Catalytic do 100.0 4.4E-29 9.5E-34  248.0  16.4  178    1-184    78-265 (279)
101 cd05607 STKc_GRK7 Catalytic do 100.0 4.8E-29   1E-33  247.1  16.6  178    1-182    74-262 (277)
102 cd05572 STKc_cGK_PKG Catalytic 100.0   6E-29 1.3E-33  242.3  16.8  179    1-182    74-260 (262)
103 cd07874 STKc_JNK3 Catalytic do 100.0 4.8E-29   1E-33  255.9  16.3  171    4-179   105-316 (355)
104 cd05624 STKc_MRCK_beta Catalyt 100.0 5.7E-29 1.2E-33  253.9  16.6  179    1-183    82-275 (331)
105 PTZ00283 serine/threonine prot 100.0 4.4E-29 9.6E-34  270.2  16.6  174    1-179   120-302 (496)
106 PTZ00267 NIMA-related protein  100.0 5.1E-29 1.1E-33  268.0  17.0  173    1-178   146-327 (478)
107 cd05606 STKc_beta_ARK Catalyti 100.0 7.4E-29 1.6E-33  245.9  16.7  178    1-184    78-265 (278)
108 cd05605 STKc_GRK4_like Catalyt 100.0 8.5E-29 1.8E-33  246.3  16.7  178    1-183    81-270 (285)
109 PHA03212 serine/threonine kina 100.0 7.5E-29 1.6E-33  260.4  17.1  174    3-179   165-381 (391)
110 KOG0986 G protein-coupled rece 100.0 1.6E-29 3.6E-34  262.2  11.5  179    1-184   266-456 (591)
111 cd08223 STKc_Nek4 Catalytic do 100.0 2.2E-28 4.9E-33  236.8  18.7  172    1-177    81-257 (257)
112 KOG0603 Ribosomal protein S6 k 100.0 3.1E-29 6.7E-34  269.2  13.9  168    1-177   397-566 (612)
113 cd06637 STKc_TNIK Catalytic do 100.0 1.2E-28 2.6E-33  241.1  16.5  173    1-177    90-272 (272)
114 cd06650 PKc_MEK1 Catalytic dom 100.0 9.6E-29 2.1E-33  252.6  16.4  175    1-180    84-305 (333)
115 cd06645 STKc_MAP4K3 Catalytic  100.0 1.7E-28 3.7E-33  239.7  16.6  173    1-176    87-267 (267)
116 cd05102 PTKc_VEGFR3 Catalytic  100.0   2E-28 4.3E-33  249.0  17.5  154   16-173   170-329 (338)
117 KOG0580 Serine/threonine prote 100.0 3.3E-29 7.2E-34  243.1  11.1  172    1-179   103-278 (281)
118 PHA02988 hypothetical protein; 100.0 1.1E-28 2.4E-33  246.4  15.3  168    1-174   103-275 (283)
119 cd05630 STKc_GRK6 Catalytic do 100.0 1.3E-28 2.7E-33  245.4  15.5  176    1-180    81-267 (285)
120 cd07878 STKc_p38beta_MAPK11 Ca 100.0   2E-28 4.3E-33  249.8  17.3  171    3-180   102-304 (343)
121 cd05574 STKc_phototropin_like  100.0 2.5E-28 5.4E-33  245.4  17.8  181    1-185    82-300 (316)
122 cd06631 STKc_YSK4 Catalytic do 100.0 1.9E-28   4E-33  239.2  16.2  174    1-177    83-265 (265)
123 PHA03390 pk1 serine/threonine- 100.0   3E-28 6.5E-33  240.5  17.5  170    1-178    90-266 (267)
124 cd08529 STKc_FA2-like Catalyti 100.0 4.5E-28 9.8E-33  234.1  17.8  172    1-177    80-256 (256)
125 PHA03207 serine/threonine kina 100.0 1.8E-28 3.9E-33  256.5  16.0  176    4-182   169-383 (392)
126 cd07853 STKc_NLK Catalytic dom 100.0   2E-28 4.3E-33  253.4  16.1  173    4-180    87-294 (372)
127 PF00069 Pkinase:  Protein kina 100.0 3.4E-29 7.4E-34  242.1   9.6  174    1-177    79-260 (260)
128 KOG0579 Ste20-like serine/thre 100.0 1.1E-28 2.4E-33  262.9  14.2  176    1-180   110-295 (1187)
129 cd05611 STKc_Rim15_like Cataly 100.0 3.5E-28 7.6E-33  236.7  16.3  174    1-181    78-258 (260)
130 cd06652 STKc_MEKK2 Catalytic d 100.0 4.3E-28 9.4E-33  237.0  17.0  174    1-178    87-265 (265)
131 cd06651 STKc_MEKK3 Catalytic d 100.0 3.9E-28 8.5E-33  237.8  16.4  173    1-178    87-265 (266)
132 PLN00034 mitogen-activated pro 100.0 5.4E-28 1.2E-32  248.5  18.1  172    1-180   153-334 (353)
133 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.7E-28 8.1E-33  239.6  16.1  173    1-177   100-282 (282)
134 cd05580 STKc_PKA Catalytic dom 100.0 4.8E-28   1E-32  240.8  16.9  174    1-182    82-262 (290)
135 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.1E-28 8.8E-33  243.8  16.4  174    4-181    87-293 (309)
136 cd08217 STKc_Nek2 Catalytic do 100.0 5.7E-28 1.2E-32  233.3  16.8  172    1-177    82-265 (265)
137 cd06628 STKc_MAPKKK_Byr2_like  100.0 4.4E-28 9.5E-33  236.5  16.1  172    1-177    87-267 (267)
138 KOG0596 Dual specificity; seri 100.0 1.5E-28 3.3E-33  259.8  13.8  171    5-179   444-632 (677)
139 PHA03209 serine/threonine kina 100.0 2.9E-28 6.2E-33  251.7  15.7  173    4-179   140-356 (357)
140 cd06605 PKc_MAPKK Catalytic do 100.0 2.3E-28 5.1E-33  237.7  14.1  175    1-179    80-262 (265)
141 cd06612 STKc_MST1_2 Catalytic  100.0 4.7E-28   1E-32  234.0  16.1  173    1-177    79-256 (256)
142 cd06639 STKc_myosinIIIB Cataly 100.0 6.2E-28 1.3E-32  239.5  17.1  174    1-178   105-291 (291)
143 cd06643 STKc_SLK Catalytic dom 100.0 7.9E-28 1.7E-32  237.6  17.8  176    1-180    83-268 (282)
144 cd08220 STKc_Nek8 Catalytic do 100.0 8.6E-28 1.9E-32  232.2  17.6  173    1-177    80-256 (256)
145 cd07867 STKc_CDC2L6 Catalytic  100.0 1.6E-28 3.6E-33  246.1  12.9  173    3-177    82-317 (317)
146 cd05632 STKc_GRK5 Catalytic do 100.0 4.9E-28 1.1E-32  240.8  16.2  177    1-182    81-269 (285)
147 cd06609 STKc_MST3_like Catalyt 100.0 6.2E-28 1.4E-32  237.0  16.5  175    1-180    80-257 (274)
148 cd07839 STKc_CDK5 Catalytic do 100.0 4.9E-28 1.1E-32  238.6  15.6  171    4-177    82-284 (284)
149 KOG0607 MAP kinase-interacting 100.0 2.2E-28 4.8E-33  245.1  13.2  179    2-182   158-369 (463)
150 cd06608 STKc_myosinIII_like Ca 100.0 5.3E-28 1.2E-32  235.2  15.4  173    1-177    90-275 (275)
151 cd06624 STKc_ASK Catalytic dom 100.0 8.9E-28 1.9E-32  235.2  17.1  175    1-177    86-268 (268)
152 cd06630 STKc_MEKK1 Catalytic d 100.0 9.4E-28   2E-32  233.9  16.8  176    1-178    84-268 (268)
153 cd06658 STKc_PAK5 Catalytic do 100.0 6.5E-28 1.4E-32  241.4  16.1  177    1-182   100-280 (292)
154 cd05579 STKc_MAST_like Catalyt 100.0 1.1E-27 2.4E-32  231.2  17.0  176    1-180    74-263 (265)
155 KOG0667 Dual-specificity tyros 100.0 5.2E-28 1.1E-32  260.5  15.6  174    3-180   270-508 (586)
156 cd06638 STKc_myosinIIIA Cataly 100.0 9.6E-28 2.1E-32  236.8  16.3  173    1-177   101-286 (286)
157 cd06623 PKc_MAPKK_plant_like C 100.0 8.3E-28 1.8E-32  232.9  15.5  176    1-179    80-261 (264)
158 cd06654 STKc_PAK1 Catalytic do 100.0 7.3E-28 1.6E-32  241.2  15.5  176    1-180    98-276 (296)
159 KOG0983 Mitogen-activated prot 100.0 7.4E-28 1.6E-32  237.5  15.1  165   14-181   185-356 (391)
160 cd06632 STKc_MEKK1_plant Catal 100.0 1.3E-27 2.9E-32  230.7  16.6  173    1-177    83-258 (258)
161 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.1E-27 2.3E-32  232.5  15.7  173    1-177    80-267 (267)
162 KOG0696 Serine/threonine prote 100.0 3.6E-28 7.8E-33  249.7  12.7  179    1-185   431-617 (683)
163 KOG4645 MAPKKK (MAP kinase kin 100.0 8.6E-29 1.9E-33  280.4   8.6  176    1-180  1315-1500(1509)
164 cd06606 STKc_MAPKKK Catalytic  100.0 1.9E-27   4E-32  227.7  16.5  174    1-177    82-260 (260)
165 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.6E-27 3.4E-32  234.4  16.3  174    1-177    81-286 (286)
166 cd08227 PK_STRAD_alpha Pseudok 100.0 1.3E-27 2.9E-32  242.6  16.1  176    1-180    80-313 (327)
167 cd06655 STKc_PAK2 Catalytic do 100.0 1.8E-27 3.8E-32  238.7  16.8  176    1-180    97-275 (296)
168 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.6E-27 3.4E-32  234.5  16.1  176    4-182    83-269 (283)
169 cd06644 STKc_STK10_LOK Catalyt 100.0 3.1E-27 6.8E-32  234.9  18.3  177    1-181    90-276 (292)
170 cd06615 PKc_MEK Catalytic doma 100.0   2E-27 4.3E-32  239.3  17.1  174    1-179    80-292 (308)
171 cd06613 STKc_MAP4K3_like Catal 100.0 1.6E-27 3.5E-32  231.0  15.7  172    1-176    81-262 (262)
172 cd05578 STKc_Yank1 Catalytic d  99.9 1.8E-27   4E-32  231.3  15.9  172    1-177    81-258 (258)
173 cd06648 STKc_PAK_II Catalytic   99.9 2.6E-27 5.6E-32  235.7  17.3  175    1-180    97-275 (285)
174 cd07861 STKc_CDK1_euk Catalyti  99.9 1.6E-27 3.5E-32  234.7  15.7  171    4-177    82-285 (285)
175 cd06611 STKc_SLK_like Catalyti  99.9 1.8E-27 3.9E-32  234.5  16.0  176    1-180    83-268 (280)
176 smart00750 KIND kinase non-cat  99.9 7.5E-28 1.6E-32  222.1  12.5  159    5-178     1-169 (176)
177 cd06653 STKc_MEKK3_like_1 Cata  99.9 2.8E-27 6.1E-32  231.6  17.0  173    1-177    87-264 (264)
178 cd05577 STKc_GRK Catalytic dom  99.9 1.5E-27 3.1E-32  235.5  14.9  177    1-182    74-262 (277)
179 cd08221 STKc_Nek9 Catalytic do  99.9 4.1E-27   9E-32  228.2  17.6  172    1-177    80-256 (256)
180 cd06616 PKc_MKK4 Catalytic dom  99.9 1.7E-27 3.7E-32  235.6  15.2  163   14-179   101-272 (288)
181 PHA03211 serine/threonine kina  99.9 1.7E-27 3.8E-32  255.9  16.5  173    4-179   243-460 (461)
182 cd06646 STKc_MAP4K5 Catalytic   99.9 1.6E-27 3.5E-32  232.9  14.8  172    1-176    87-267 (267)
183 cd05122 PKc_STE Catalytic doma  99.9 3.9E-27 8.6E-32  224.6  16.9  172    1-176    78-253 (253)
184 cd05048 PTKc_Ror Catalytic Dom  99.9 2.7E-27 5.9E-32  233.2  16.3  169    1-174    89-279 (283)
185 cd07841 STKc_CDK7 Catalytic do  99.9 4.1E-27 8.8E-32  234.0  17.4  176    1-181    83-289 (298)
186 cd06619 PKc_MKK5 Catalytic dom  99.9 3.8E-27 8.2E-32  233.1  17.0  172    1-180    80-259 (279)
187 cd07832 STKc_CCRK Catalytic do  99.9 3.6E-27 7.7E-32  231.9  16.6  174    1-178    80-286 (286)
188 cd06626 STKc_MEKK4 Catalytic d  99.9 5.4E-27 1.2E-31  227.6  17.4  173    1-177    80-264 (264)
189 cd08216 PK_STRAD Pseudokinase   99.9 3.2E-27   7E-32  236.8  16.0  176    1-179    80-300 (314)
190 cd05609 STKc_MAST Catalytic do  99.9 4.7E-27   1E-31  235.7  17.2  179    1-183    82-282 (305)
191 cd05576 STKc_RPK118_like Catal  99.9 1.8E-27 3.8E-32  230.7  13.5  165    1-177    66-237 (237)
192 cd06656 STKc_PAK3 Catalytic do  99.9 2.2E-27 4.7E-32  237.9  14.5  176    1-180    97-275 (297)
193 cd06917 STKc_NAK1_like Catalyt  99.9 4.3E-27 9.3E-32  231.1  16.0  176    1-181    83-262 (277)
194 PTZ00266 NIMA-related protein   99.9 2.1E-27 4.7E-32  271.3  15.8  178    1-180    95-301 (1021)
195 cd07831 STKc_MOK Catalytic dom  99.9 4.9E-27 1.1E-31  230.5  16.3  169    4-177    83-282 (282)
196 cd07873 STKc_PCTAIRE1 Catalyti  99.9 4.7E-27   1E-31  234.9  16.2  174    4-181    87-293 (301)
197 cd08218 STKc_Nek1 Catalytic do  99.9 7.2E-27 1.6E-31  226.5  17.0  172    1-177    80-256 (256)
198 cd07837 STKc_CdkB_plant Cataly  99.9 7.1E-27 1.5E-31  231.6  17.2  173    4-178    89-295 (295)
199 cd08215 STKc_Nek Catalytic dom  99.9   7E-27 1.5E-31  224.4  16.5  172    1-177    80-258 (258)
200 cd00192 PTKc Catalytic domain   99.9 7.1E-27 1.5E-31  224.9  16.3  169    1-174    77-260 (262)
201 cd06659 STKc_PAK6 Catalytic do  99.9 6.8E-27 1.5E-31  234.6  16.8  175    1-180    99-277 (297)
202 cd07845 STKc_CDK10 Catalytic d  99.9 8.9E-27 1.9E-31  233.8  17.5  173    4-180    91-296 (309)
203 cd07850 STKc_JNK Catalytic dom  99.9 5.9E-27 1.3E-31  240.5  16.5  169    4-178   104-315 (353)
204 cd06622 PKc_MAPKK_PBS2_like Ca  99.9 1.1E-26 2.3E-31  229.6  17.5  174    1-180    80-268 (286)
205 cd05049 PTKc_Trk Catalytic dom  99.9 1.2E-26 2.6E-31  227.9  17.1  168    1-173    89-276 (280)
206 cd05116 PTKc_Syk Catalytic dom  99.9 1.2E-26 2.7E-31  226.1  17.1  169    1-174    76-251 (257)
207 cd06629 STKc_MAPKKK_Bck1_like   99.9 1.2E-26 2.6E-31  227.4  17.0  174    1-177    89-272 (272)
208 KOG4721 Serine/threonine prote  99.9 6.9E-28 1.5E-32  255.0   8.8  170    1-174   193-364 (904)
209 cd07860 STKc_CDK2_3 Catalytic   99.9   1E-26 2.3E-31  229.2  16.3  171    4-177    82-284 (284)
210 cd05093 PTKc_TrkB Catalytic do  99.9 1.2E-26 2.6E-31  230.6  16.8  168    1-173    88-274 (288)
211 cd08225 STKc_Nek5 Catalytic do  99.9 1.1E-26 2.3E-31  224.6  16.0  173    1-177    80-257 (257)
212 cd06620 PKc_MAPKK_Byr1_like Ca  99.9 1.2E-26 2.6E-31  229.8  16.6  176    1-180    84-272 (284)
213 cd07833 STKc_CDKL Catalytic do  99.9 1.4E-26 3.1E-31  227.8  16.7  174    1-177    81-288 (288)
214 cd05094 PTKc_TrkC Catalytic do  99.9 1.5E-26 3.2E-31  230.3  16.9  169    1-174    88-278 (291)
215 cd05075 PTKc_Axl Catalytic dom  99.9 1.1E-26 2.4E-31  227.2  15.7  169    1-174    87-267 (272)
216 KOG0577 Serine/threonine prote  99.9 2.5E-27 5.3E-32  251.6  11.8  170    3-179   108-283 (948)
217 cd06627 STKc_Cdc7_like Catalyt  99.9 1.8E-26 3.9E-31  221.9  16.9  172    1-177    80-254 (254)
218 cd05123 STKc_AGC Catalytic dom  99.9 2.4E-26 5.3E-31  221.3  17.7  171    1-177    74-250 (250)
219 cd07843 STKc_CDC2L1 Catalytic   99.9 1.6E-26 3.6E-31  229.5  16.9  170    4-177    89-293 (293)
220 cd05111 PTK_HER3 Pseudokinase   99.9 2.8E-26 6.1E-31  227.2  17.6  169    1-174    89-264 (279)
221 cd07835 STKc_CDK1_like Catalyt  99.9 1.8E-26 3.9E-31  227.4  16.1  171    4-177    81-283 (283)
222 cd07830 STKc_MAK_like Catalyti  99.9 3.8E-26 8.2E-31  224.7  18.3  171    4-177    81-283 (283)
223 cd08530 STKc_CNK2-like Catalyt  99.9 3.2E-26 6.9E-31  220.8  17.3  171    1-177    80-256 (256)
224 cd06614 STKc_PAK Catalytic dom  99.9 1.7E-26 3.6E-31  228.6  15.8  177    1-181    96-277 (286)
225 cd05581 STKc_PDK1 Catalytic do  99.9   2E-26 4.4E-31  225.1  16.1  171    1-177    83-280 (280)
226 cd05089 PTKc_Tie1 Catalytic do  99.9 1.8E-26   4E-31  230.6  16.1  169    1-174    84-271 (297)
227 cd05109 PTKc_HER2 Catalytic do  99.9 2.3E-26 4.9E-31  226.9  16.6  169    1-174    89-264 (279)
228 cd05106 PTKc_CSF-1R Catalytic   99.9 1.6E-26 3.4E-31  240.8  16.1  155   16-174   208-368 (374)
229 cd07857 STKc_MPK1 Catalytic do  99.9 1.3E-26 2.9E-31  235.7  15.2  173    3-179    88-297 (332)
230 KOG0586 Serine/threonine prote  99.9 1.8E-27   4E-32  254.6   9.2  177    1-183   136-315 (596)
231 cd05108 PTKc_EGFR Catalytic do  99.9 1.9E-26 4.1E-31  232.7  16.1  169    1-174    89-264 (316)
232 cd07834 STKc_MAPK Catalytic do  99.9 1.9E-26 4.1E-31  233.1  16.0  175    4-182    87-297 (330)
233 cd07865 STKc_CDK9 Catalytic do  99.9 2.4E-26 5.2E-31  228.6  16.4  171    3-177   101-310 (310)
234 cd06647 STKc_PAK_I Catalytic d  99.9 1.6E-26 3.4E-31  231.2  15.1  177    1-181    97-276 (293)
235 cd05613 STKc_MSK1_N N-terminal  99.9   3E-26 6.6E-31  227.2  16.9  177    1-182    86-276 (290)
236 cd06618 PKc_MKK7 Catalytic dom  99.9 2.6E-26 5.6E-31  229.1  16.3  174    4-180    97-279 (296)
237 cd05082 PTKc_Csk Catalytic dom  99.9 3.3E-26 7.1E-31  222.6  16.6  166    1-173    81-251 (256)
238 KOG0608 Warts/lats-like serine  99.9 1.3E-26 2.9E-31  247.5  14.9  181    1-184   710-938 (1034)
239 cd05060 PTKc_Syk_like Catalyti  99.9   4E-26 8.6E-31  222.2  17.1  168    1-173    76-250 (257)
240 cd05062 PTKc_IGF-1R Catalytic   99.9 2.4E-26 5.1E-31  226.5  15.6  169    1-174    90-274 (277)
241 KOG0574 STE20-like serine/thre  99.9 5.1E-28 1.1E-32  240.9   3.7  178    1-183   109-292 (502)
242 cd05104 PTKc_Kit Catalytic dom  99.9 3.3E-26 7.1E-31  238.3  17.5  155   16-174   210-370 (375)
243 PLN03225 Serine/threonine-prot  99.9 2.2E-26 4.7E-31  253.1  16.9  179    1-183   216-459 (566)
244 cd05054 PTKc_VEGFR Catalytic d  99.9 3.3E-26 7.2E-31  234.8  17.0  155   16-174   169-329 (337)
245 cd07838 STKc_CDK4_6_like Catal  99.9 4.4E-26 9.4E-31  223.9  17.2  170    4-177    89-287 (287)
246 cd06640 STKc_MST4 Catalytic do  99.9 2.3E-26 4.9E-31  227.0  15.2  174    1-180    83-259 (277)
247 cd07855 STKc_ERK5 Catalytic do  99.9 2.6E-26 5.5E-31  233.8  15.7  175    4-181    91-301 (334)
248 cd08219 STKc_Nek3 Catalytic do  99.9 3.4E-26 7.4E-31  222.0  15.8  169    1-174    79-252 (255)
249 cd05052 PTKc_Abl Catalytic dom  99.9 5.1E-26 1.1E-30  222.5  17.1  169    1-174    83-258 (263)
250 cd07846 STKc_CDKL2_3 Catalytic  99.9 3.2E-26 6.9E-31  225.6  15.8  174    1-177    81-286 (286)
251 KOG4236 Serine/threonine prote  99.9 1.4E-27   3E-32  250.9   6.3  171    5-180   647-825 (888)
252 cd06642 STKc_STK25-YSK1 Cataly  99.9   2E-26 4.3E-31  227.1  14.2  173    1-179    83-258 (277)
253 cd05035 PTKc_Axl_like Catalyti  99.9 4.8E-26   1E-30  222.0  16.6  169    1-174    88-268 (273)
254 cd07870 STKc_PFTAIRE2 Catalyti  99.9 3.7E-26   8E-31  226.7  16.1  171    4-177    86-291 (291)
255 cd07858 STKc_TEY_MAPK_plant Ca  99.9 3.7E-26   8E-31  233.2  16.3  173    4-180    92-297 (337)
256 PHA03210 serine/threonine kina  99.9 3.4E-26 7.3E-31  247.9  16.8  176    4-182   246-462 (501)
257 cd06621 PKc_MAPKK_Pek1_like Ca  99.9 5.5E-26 1.2E-30  225.7  17.0  176    1-180    82-272 (287)
258 cd05091 PTKc_Ror2 Catalytic do  99.9 4.4E-26 9.5E-31  225.0  16.1  169    1-174    89-279 (283)
259 cd05061 PTKc_InsR Catalytic do  99.9 5.9E-26 1.3E-30  225.6  17.1  175    1-180    90-286 (288)
260 cd05047 PTKc_Tie Catalytic dom  99.9 4.6E-26 9.9E-31  224.0  15.7  169    1-174    77-264 (270)
261 cd05053 PTKc_FGFR Catalytic do  99.9 3.4E-26 7.3E-31  226.9  14.8  169    1-174    97-287 (293)
262 cd05118 STKc_CMGC Catalytic do  99.9 5.6E-26 1.2E-30  222.7  16.2  171    4-177    81-283 (283)
263 PLN00009 cyclin-dependent kina  99.9 4.5E-26 9.8E-31  226.4  15.8  175    4-180    84-290 (294)
264 PTZ00024 cyclin-dependent prot  99.9 6.6E-26 1.4E-30  230.3  17.1  176    4-183   103-322 (335)
265 cd05036 PTKc_ALK_LTK Catalytic  99.9 5.9E-26 1.3E-30  224.1  15.9  170    1-174    90-274 (277)
266 cd05042 PTKc_Aatyk Catalytic d  99.9 5.7E-26 1.2E-30  222.5  15.7  170    1-173    76-265 (269)
267 cd05114 PTKc_Tec_Rlk Catalytic  99.9 7.5E-26 1.6E-30  220.1  16.4  168    1-173    80-253 (256)
268 cd07851 STKc_p38 Catalytic dom  99.9 4.2E-26 9.1E-31  233.6  15.3  171    3-180   102-304 (343)
269 cd05088 PTKc_Tie2 Catalytic do  99.9   4E-26 8.6E-31  229.4  14.8  169    1-174    89-276 (303)
270 cd08228 STKc_Nek6 Catalytic do  99.9 5.5E-26 1.2E-30  221.7  15.2  171    1-174    83-261 (267)
271 cd05583 STKc_MSK_N N-terminal   99.9 7.5E-26 1.6E-30  224.2  16.3  177    1-182    86-274 (288)
272 cd05040 PTKc_Ack_like Catalyti  99.9 8.6E-26 1.9E-30  219.1  16.4  169    1-173    76-253 (257)
273 cd07849 STKc_ERK1_2_like Catal  99.9 7.1E-26 1.5E-30  230.7  16.5  174    4-181    91-299 (336)
274 cd06607 STKc_TAO Catalytic dom  99.9 1.2E-25 2.7E-30  225.6  18.0  170    4-180    98-273 (307)
275 PHA02882 putative serine/threo  99.9 5.5E-26 1.2E-30  227.7  15.4  163    5-173   111-291 (294)
276 PLN00181 protein SPA1-RELATED;  99.9 1.8E-26 3.9E-31  262.5  13.3  172    2-179    61-270 (793)
277 cd05092 PTKc_TrkA Catalytic do  99.9 8.1E-26 1.8E-30  223.7  16.4  168    1-173    88-276 (280)
278 cd05032 PTKc_InsR_like Catalyt  99.9 7.8E-26 1.7E-30  221.8  16.0  169    1-174    90-274 (277)
279 cd07844 STKc_PCTAIRE_like Cata  99.9 7.6E-26 1.6E-30  224.1  16.0  171    4-177    86-291 (291)
280 cd05058 PTKc_Met_Ron Catalytic  99.9   9E-26   2E-30  219.6  16.2  169    1-174    78-255 (262)
281 cd07854 STKc_MAPK4_6 Catalytic  99.9 8.4E-26 1.8E-30  231.3  16.6  172    4-179    99-305 (342)
282 cd08226 PK_STRAD_beta Pseudoki  99.9 3.1E-26 6.6E-31  232.7  13.1  177    1-180    80-314 (328)
283 cd05059 PTKc_Tec_like Catalyti  99.9   1E-25 2.2E-30  219.5  16.3  169    1-174    80-254 (256)
284 cd05115 PTKc_Zap-70 Catalytic   99.9 1.2E-25 2.6E-30  220.1  16.7  169    1-174    75-251 (257)
285 cd05113 PTKc_Btk_Bmx Catalytic  99.9 1.1E-25 2.5E-30  219.9  16.4  169    1-174    80-254 (256)
286 cd08222 STKc_Nek11 Catalytic d  99.9 1.4E-25   3E-30  218.4  16.9  171    1-177    83-260 (260)
287 cd08224 STKc_Nek6_Nek7 Catalyt  99.9 1.5E-25 3.2E-30  217.9  17.1  170    1-173    83-260 (267)
288 cd05055 PTKc_PDGFR Catalytic d  99.9   1E-25 2.3E-30  226.5  16.6  170    1-174   120-297 (302)
289 cd05072 PTKc_Lyn Catalytic dom  99.9 1.3E-25 2.7E-30  218.8  16.6  168    1-173    82-256 (261)
290 smart00220 S_TKc Serine/Threon  99.9 1.6E-25 3.6E-30  211.3  16.8  174    1-177    68-244 (244)
291 cd07842 STKc_CDK8_like Catalyt  99.9   6E-26 1.3E-30  226.7  14.6  171    4-177    87-316 (316)
292 cd06657 STKc_PAK4 Catalytic do  99.9 1.3E-25 2.8E-30  225.1  16.9  176    1-181    98-277 (292)
293 cd05037 PTK_Jak_rpt1 Pseudokin  99.9 1.2E-25 2.6E-30  217.6  16.1  165    1-174    81-257 (259)
294 cd05064 PTKc_EphR_A10 Catalyti  99.9 1.1E-25 2.4E-30  221.1  16.0  168    1-173    87-260 (266)
295 cd08229 STKc_Nek7 Catalytic do  99.9 1.2E-25 2.5E-30  219.4  16.0  170    1-173    83-260 (267)
296 cd07836 STKc_Pho85 Catalytic d  99.9   1E-25 2.2E-30  221.8  15.6  170    4-177    81-284 (284)
297 cd05099 PTKc_FGFR4 Catalytic d  99.9 1.6E-25 3.4E-30  225.9  17.4  169    1-174    99-289 (314)
298 cd05087 PTKc_Aatyk1_Aatyk3 Cat  99.9 1.6E-25 3.4E-30  219.8  16.9  170    1-173    76-265 (269)
299 cd07866 STKc_BUR1 Catalytic do  99.9 9.1E-26   2E-30  224.6  15.1  170    4-177    98-311 (311)
300 cd05051 PTKc_DDR Catalytic dom  99.9 1.5E-25 3.2E-30  222.2  16.5  169    1-173   100-292 (296)
301 cd05101 PTKc_FGFR2 Catalytic d  99.9 1.7E-25 3.8E-30  223.9  17.0  169    1-174   102-292 (304)
302 cd05069 PTKc_Yes Catalytic dom  99.9   2E-25 4.4E-30  217.9  17.0  168    1-173    81-255 (260)
303 cd05070 PTKc_Fyn_Yrk Catalytic  99.9 2.1E-25 4.5E-30  217.5  16.9  168    1-173    81-255 (260)
304 cd05090 PTKc_Ror1 Catalytic do  99.9 1.6E-25 3.5E-30  221.2  16.3  169    1-174    88-279 (283)
305 cd05098 PTKc_FGFR1 Catalytic d  99.9 1.1E-25 2.3E-30  226.0  15.2  169    1-174   105-295 (307)
306 smart00219 TyrKc Tyrosine kina  99.9 2.4E-25 5.1E-30  214.6  16.9  168    1-173    82-256 (258)
307 cd05148 PTKc_Srm_Brk Catalytic  99.9 1.6E-25 3.5E-30  217.7  15.8  169    1-174    83-257 (261)
308 KOG0665 Jun-N-terminal kinase   99.9   6E-26 1.3E-30  227.8  13.1  170    4-178   104-314 (369)
309 cd05096 PTKc_DDR1 Catalytic do  99.9 1.4E-25   3E-30  224.6  15.7  169    1-173   100-300 (304)
310 cd06633 STKc_TAO3 Catalytic do  99.9 2.7E-25 5.8E-30  224.6  17.8  170    4-180   104-279 (313)
311 cd07829 STKc_CDK_like Catalyti  99.9 2.1E-25 4.6E-30  218.5  16.5  171    4-177    81-282 (282)
312 cd05068 PTKc_Frk_like Catalyti  99.9 3.6E-25 7.8E-30  215.9  17.9  167    1-173    82-256 (261)
313 KOG0695 Serine/threonine prote  99.9 3.5E-26 7.5E-31  230.4  10.7  180    1-185   332-527 (593)
314 cd05084 PTKc_Fes Catalytic dom  99.9 1.9E-25 4.2E-30  216.4  15.7  168    1-173    74-248 (252)
315 cd06641 STKc_MST3 Catalytic do  99.9 1.7E-25 3.8E-30  220.7  15.6  174    1-180    83-259 (277)
316 cd07840 STKc_CDK9_like Catalyt  99.9 1.8E-25 3.8E-30  219.2  15.4  170    4-177    83-287 (287)
317 cd05086 PTKc_Aatyk2 Catalytic   99.9 3.3E-25 7.1E-30  218.0  17.4  169    1-173    76-264 (268)
318 cd06634 STKc_TAO2 Catalytic do  99.9 2.4E-25 5.1E-30  224.2  16.5  169    4-179    98-272 (308)
319 KOG0197 Tyrosine kinases [Sign  99.9 9.7E-26 2.1E-30  238.3  14.1  168    1-173   282-456 (468)
320 KOG0193 Serine/threonine prote  99.9 2.4E-26 5.3E-31  245.4   9.5  169    1-173   468-648 (678)
321 cd05071 PTKc_Src Catalytic dom  99.9 3.6E-25 7.9E-30  217.0  16.9  168    1-173    81-255 (262)
322 cd05033 PTKc_EphR Catalytic do  99.9 2.8E-25 6.2E-30  217.2  16.1  169    1-174    86-261 (266)
323 cd05039 PTKc_Csk_like Catalyti  99.9 3.6E-25 7.8E-30  215.0  16.6  167    1-174    81-252 (256)
324 cd07877 STKc_p38alpha_MAPK14 C  99.9 2.8E-25   6E-30  228.0  16.4  172    2-180   103-306 (345)
325 KOG1035 eIF-2alpha kinase GCN2  99.9 8.6E-26 1.9E-30  255.2  13.6  173    1-179   677-876 (1351)
326 cd05080 PTKc_Tyk2_rpt2 Catalyt  99.9 3.9E-25 8.5E-30  218.5  16.8  168    1-173    89-276 (283)
327 cd05041 PTKc_Fes_like Catalyti  99.9 4.3E-25 9.4E-30  213.4  16.6  169    1-174    73-248 (251)
328 cd07852 STKc_MAPK15 Catalytic   99.9 2.6E-25 5.5E-30  226.5  15.8  173    4-180    92-301 (337)
329 PF07714 Pkinase_Tyr:  Protein   99.9 1.2E-25 2.6E-30  220.9  12.8  168    1-173    82-257 (259)
330 cd05078 PTK_Jak2_Jak3_rpt1 Pse  99.9 4.2E-25 9.1E-30  215.8  16.4  165    1-174    80-256 (258)
331 cd06635 STKc_TAO1 Catalytic do  99.9 5.5E-25 1.2E-29  222.5  17.7  171    4-181   108-284 (317)
332 KOG1989 ARK protein kinase fam  99.9 6.8E-26 1.5E-30  250.4  11.9  168    1-174   123-307 (738)
333 cd05045 PTKc_RET Catalytic dom  99.9 3.9E-25 8.5E-30  219.6  16.0  169    1-174    84-282 (290)
334 cd05046 PTK_CCK4 Pseudokinase   99.9 3.7E-25   8E-30  217.1  15.6  170    1-174    89-272 (275)
335 cd05056 PTKc_FAK Catalytic dom  99.9 6.7E-25 1.4E-29  215.1  17.3  169    1-174    87-261 (270)
336 cd05083 PTKc_Chk Catalytic dom  99.9 5.9E-25 1.3E-29  213.6  16.7  167    1-174    79-250 (254)
337 cd05057 PTKc_EGFR_like Catalyt  99.9 6.5E-25 1.4E-29  216.5  17.0  169    1-174    89-264 (279)
338 cd05110 PTKc_HER4 Catalytic do  99.9 4.8E-25   1E-29  221.3  16.2  169    1-174    89-264 (303)
339 cd05100 PTKc_FGFR3 Catalytic d  99.9 5.2E-25 1.1E-29  224.2  16.7  169    1-174    99-289 (334)
340 cd05043 PTK_Ryk Pseudokinase d  99.9 5.8E-25 1.2E-29  216.7  16.0  168    1-173    90-271 (280)
341 cd05112 PTKc_Itk Catalytic dom  99.9 6.3E-25 1.4E-29  212.9  16.0  169    1-174    80-254 (256)
342 cd07879 STKc_p38delta_MAPK13 C  99.9 4.6E-25   1E-29  225.8  15.8  169    5-181   104-304 (342)
343 cd05067 PTKc_Lck_Blk Catalytic  99.9 8.4E-25 1.8E-29  213.2  16.8  168    1-173    81-255 (260)
344 cd07864 STKc_CDK12 Catalytic d  99.9 5.1E-25 1.1E-29  219.0  15.5  170    4-177    99-302 (302)
345 cd07880 STKc_p38gamma_MAPK12 C  99.9 4.3E-25 9.3E-30  226.4  15.0  171    3-180   102-304 (343)
346 cd05044 PTKc_c-ros Catalytic d  99.9 8.7E-25 1.9E-29  213.5  16.4  168    1-173    80-265 (269)
347 KOG0666 Cyclin C-dependent kin  99.9 2.8E-25 6.2E-30  222.3  13.1  177    5-183   112-346 (438)
348 cd05103 PTKc_VEGFR2 Catalytic   99.9 7.9E-25 1.7E-29  224.5  16.8  155   16-174   175-335 (343)
349 cd05085 PTKc_Fer Catalytic dom  99.9 1.2E-24 2.7E-29  210.2  17.2  169    1-174    73-247 (250)
350 cd05050 PTKc_Musk Catalytic do  99.9 8.3E-25 1.8E-29  216.7  16.3  168    1-173    89-284 (288)
351 KOG2345 Serine/threonine prote  99.9 1.2E-25 2.5E-30  219.5   9.8  173    1-174   104-296 (302)
352 cd05063 PTKc_EphR_A2 Catalytic  99.9 1.1E-24 2.3E-29  213.1  16.7  169    1-174    87-263 (268)
353 cd08528 STKc_Nek10 Catalytic d  99.9 8.6E-25 1.9E-29  213.9  15.9  170    1-174    90-266 (269)
354 cd05077 PTK_Jak1_rpt1 Pseudoki  99.9 7.8E-25 1.7E-29  215.3  15.6  165    1-174    85-260 (262)
355 cd05034 PTKc_Src_like Catalyti  99.9 9.7E-25 2.1E-29  212.2  15.6  168    1-173    82-256 (261)
356 cd05073 PTKc_Hck Catalytic dom  99.9   2E-24 4.3E-29  210.9  16.8  168    1-173    81-255 (260)
357 cd05079 PTKc_Jak1_rpt2 Catalyt  99.9 1.9E-24 4.1E-29  214.1  16.2  170    1-174    89-279 (284)
358 cd05065 PTKc_EphR_B Catalytic   99.9 2.1E-24 4.6E-29  211.4  16.4  169    1-174    86-264 (269)
359 cd05105 PTKc_PDGFR_alpha Catal  99.9 1.7E-24 3.8E-29  228.4  16.9  155   16-174   233-393 (400)
360 cd05066 PTKc_EphR_A Catalytic   99.9 2.1E-24 4.6E-29  211.5  16.2  168    1-173    86-261 (267)
361 cd05610 STKc_MASTL Catalytic d  99.9 1.4E-24   3E-29  243.1  16.9   99   83-182   541-642 (669)
362 cd05074 PTKc_Tyro3 Catalytic d  99.9 2.1E-24 4.6E-29  211.1  16.2  169    1-174    88-268 (273)
363 cd05097 PTKc_DDR_like Catalyti  99.9 2.6E-24 5.6E-29  214.5  16.3  169    1-173    98-291 (295)
364 cd05095 PTKc_DDR2 Catalytic do  99.9 3.5E-24 7.5E-29  213.7  16.7  169    1-173   100-292 (296)
365 cd05081 PTKc_Jak2_Jak3_rpt2 Ca  99.9 3.6E-24 7.7E-29  211.5  15.6  170    1-174    88-279 (284)
366 cd05076 PTK_Tyk2_rpt1 Pseudoki  99.9 4.2E-24 9.1E-29  211.7  15.8  165    1-174    97-272 (274)
367 KOG0671 LAMMER dual specificit  99.9 5.5E-25 1.2E-29  225.0   9.6  172    4-180   174-412 (415)
368 KOG0662 Cyclin-dependent kinas  99.9 1.7E-24 3.6E-29  203.3  11.5  174    3-179    83-288 (292)
369 KOG0669 Cyclin T-dependent kin  99.9 1.7E-24 3.6E-29  211.9  11.4  175    5-182   108-323 (376)
370 PLN03224 probable serine/threo  99.9 9.3E-24   2E-28  229.1  17.9  176    1-179   266-505 (507)
371 PRK13184 pknD serine/threonine  99.9 4.1E-24 8.9E-29  243.4  15.8  170    1-173    83-284 (932)
372 cd05107 PTKc_PDGFR_beta Cataly  99.9   8E-24 1.7E-28  223.5  16.8  154   17-174   236-395 (401)
373 cd07856 STKc_Sty1_Hog1 Catalyt  99.9 7.2E-24 1.6E-28  216.3  15.4  172    3-180    92-294 (328)
374 cd05038 PTKc_Jak_rpt2 Catalyti  99.9 1.5E-23 3.2E-28  205.7  14.8  170    1-174    89-279 (284)
375 KOG0587 Traf2- and Nck-interac  99.9 5.2E-24 1.1E-28  234.9  12.4  176    1-179   102-287 (953)
376 KOG1151 Tousled-like protein k  99.9 1.3E-23 2.8E-28  217.7  13.8  180    1-180   549-747 (775)
377 KOG0670 U4/U6-associated splic  99.9 2.8E-24 6.1E-29  226.1   8.6  172    4-179   517-751 (752)
378 KOG1006 Mitogen-activated prot  99.9 1.8E-24   4E-29  212.9   4.9  167   13-181   160-334 (361)
379 KOG1187 Serine/threonine prote  99.9 1.8E-23 3.8E-28  218.5  12.5  173    1-174   153-348 (361)
380 KOG0668 Casein kinase II, alph  99.9 3.4E-23 7.3E-28  200.5  10.6  168   11-180   123-328 (338)
381 KOG1027 Serine/threonine prote  99.9 1.4E-23 3.1E-28  230.5   8.2  171    3-178   585-771 (903)
382 KOG1095 Protein tyrosine kinas  99.9 6.5E-23 1.4E-27  233.1  13.2  167    1-173   776-956 (1025)
383 KOG0664 Nemo-like MAPK-related  99.9 2.8E-23 6.1E-28  205.1   8.1  171    6-180   142-349 (449)
384 KOG0194 Protein tyrosine kinas  99.9 6.2E-23 1.3E-27  219.2   9.8  169    1-173   242-415 (474)
385 KOG1026 Nerve growth factor re  99.9 3.5E-22 7.5E-27  220.7  13.0  168    1-173   570-757 (774)
386 KOG0984 Mitogen-activated prot  99.9 5.1E-22 1.1E-26  189.9   9.7  128   11-140   139-271 (282)
387 KOG4250 TANK binding protein k  99.9 6.6E-22 1.4E-26  214.8  11.4  121    1-123    98-226 (732)
388 KOG0200 Fibroblast/platelet-de  99.8 6.7E-21 1.5E-25  211.4  15.6  170    1-174   383-575 (609)
389 KOG4257 Focal adhesion tyrosin  99.8 5.1E-21 1.1E-25  204.9   9.5  167    1-172   471-643 (974)
390 KOG1167 Serine/threonine prote  99.8 9.5E-21 2.1E-25  195.9  10.1  161   16-178   128-385 (418)
391 PLN00113 leucine-rich repeat r  99.8 1.7E-20 3.7E-25  216.9  12.8  166    1-174   764-947 (968)
392 KOG0576 Mitogen-activated prot  99.8 7.3E-21 1.6E-25  205.2   8.0  177    1-180    93-277 (829)
393 KOG4278 Protein tyrosine kinas  99.8 3.7E-20 7.9E-25  198.0  13.0  168    1-173   344-518 (1157)
394 KOG1290 Serine/threonine prote  99.8 4.6E-20   1E-24  193.6  13.5  118   63-182   394-558 (590)
395 KOG0590 Checkpoint kinase and   99.8 1.3E-20 2.8E-25  208.4   7.9  177    1-181   402-592 (601)
396 KOG3653 Transforming growth fa  99.8 4.8E-20   1E-24  193.0  11.2  167    1-169   289-494 (534)
397 cd00180 PKc Catalytic domain o  99.8 3.1E-19 6.7E-24  163.3  14.5  139    1-175    72-215 (215)
398 KOG1025 Epidermal growth facto  99.8 1.9E-19 4.1E-24  197.6  13.3  169    1-174   778-953 (1177)
399 KOG0199 ACK and related non-re  99.8 1.3E-19 2.7E-24  196.3  11.5  172    1-177   191-371 (1039)
400 KOG2052 Activin A type IB rece  99.8 2.9E-19 6.2E-24  186.1  12.3  171    1-173   290-498 (513)
401 KOG0196 Tyrosine kinase, EPH (  99.8 4.9E-20 1.1E-24  201.5   6.9  168    1-174   711-887 (996)
402 smart00221 STYKc Protein kinas  99.8 1.1E-18 2.3E-23  164.2  13.2  137    1-140    78-220 (225)
403 KOG1094 Discoidin domain recep  99.8 3.3E-19 7.2E-24  190.2  10.6  170    1-174   616-800 (807)
404 COG0515 SPS1 Serine/threonine   99.8 7.3E-18 1.6E-22  160.9  16.2  176    1-178    79-279 (384)
405 KOG1152 Signal transduction se  99.8 3.1E-19 6.7E-24  190.2   5.6  117    3-123   653-771 (772)
406 KOG0606 Microtubule-associated  99.7   4E-18 8.7E-23  191.8   9.3  152   30-186   153-327 (1205)
407 KOG1024 Receptor-like protein   99.7 2.1E-17 4.6E-22  170.0  13.2  165    4-173   372-550 (563)
408 KOG0603 Ribosomal protein S6 k  99.7 2.1E-18 4.5E-23  186.2   5.9  169    1-183    78-252 (612)
409 KOG1345 Serine/threonine kinas  99.7   1E-17 2.2E-22  165.9   7.4  171    1-177   103-290 (378)
410 KOG1033 eIF-2alpha kinase PEK/  99.7 6.5E-18 1.4E-22  179.4   5.0  166    1-177   337-515 (516)
411 KOG4158 BRPK/PTEN-induced prot  99.6 1.2E-14 2.7E-19  150.2  12.4  165    5-173   327-512 (598)
412 KOG1240 Protein kinase contain  99.6 2.7E-15 5.8E-20  169.6   7.2  162    6-174   106-291 (1431)
413 KOG1164 Casein kinase (serine/  99.5 1.8E-13   4E-18  140.3  15.2  170    2-173   102-292 (322)
414 PF14531 Kinase-like:  Kinase-l  99.5 1.2E-14 2.5E-19  147.6   5.3  131   23-165   148-288 (288)
415 KOG1023 Natriuretic peptide re  99.4 5.1E-13 1.1E-17  143.8  11.3  171    1-173    28-219 (484)
416 KOG0590 Checkpoint kinase and   99.4 9.8E-14 2.1E-18  154.0   4.9  176    1-179   102-291 (601)
417 KOG1266 Protein kinase [Signal  99.4 2.8E-13   6E-18  137.7   6.6  171    1-178   153-335 (458)
418 KOG1165 Casein kinase (serine/  99.4 1.4E-12   3E-17  132.7  10.8  135    3-139   106-256 (449)
419 KOG1163 Casein kinase (serine/  99.3 1.5E-12 3.2E-17  127.8   7.6  155    3-159    93-264 (341)
420 KOG0606 Microtubule-associated  99.3   2E-12 4.4E-17  146.4   7.7  182    1-186   885-1104(1205)
421 KOG0195 Integrin-linked kinase  99.3 6.9E-12 1.5E-16  124.8   9.2  165    1-172   268-440 (448)
422 PRK09188 serine/threonine prot  99.3 5.1E-12 1.1E-16  132.6   7.0   95    1-105    99-210 (365)
423 PRK12274 serine/threonine prot  99.3 6.8E-12 1.5E-16  122.4   6.8  113    1-123    79-209 (218)
424 KOG1166 Mitotic checkpoint ser  99.2 4.3E-11 9.4E-16  137.2   8.5  118    1-120   775-902 (974)
425 cd05147 RIO1_euk RIO kinase fa  99.2 5.2E-11 1.1E-15  113.8   6.8   69    1-73     98-167 (190)
426 cd05145 RIO1_like RIO kinase f  99.1 1.6E-10 3.5E-15  109.7   7.9   71    1-75     98-169 (190)
427 PRK10359 lipopolysaccharide co  99.0 1.7E-10 3.6E-15  114.1   3.9   92    1-114   124-215 (232)
428 KOG0601 Cyclin-dependent kinas  99.0 6.7E-10 1.5E-14  120.3   6.2  173    2-178   199-383 (524)
429 PRK10345 hypothetical protein;  98.9 4.3E-09 9.3E-14  102.6   7.7   63    3-70     90-156 (210)
430 smart00090 RIO RIO-like kinase  98.8 7.3E-09 1.6E-13  102.5   6.1   71    1-74    129-199 (237)
431 PRK01723 3-deoxy-D-manno-octul  98.7 4.1E-08 8.9E-13   97.3   7.3   63    2-72    128-191 (239)
432 PRK14879 serine/threonine prot  98.6 5.6E-08 1.2E-12   92.5   7.3   64    1-72     80-143 (211)
433 cd05144 RIO2_C RIO kinase fami  98.6 4.4E-08 9.5E-13   93.3   5.6   65    1-74    112-176 (198)
434 KOG2137 Protein kinase [Signal  98.6 3.6E-08 7.8E-13  108.8   4.9  151   26-180   105-271 (700)
435 TIGR03724 arch_bud32 Kae1-asso  98.6 7.9E-08 1.7E-12   90.8   6.5   61    1-72     78-138 (199)
436 PRK09605 bifunctional UGMP fam  98.5 9.1E-08   2E-12  105.2   6.5   61    1-73    417-477 (535)
437 COG4248 Uncharacterized protei  98.5   1E-06 2.2E-11   93.1  12.6  155   12-169   109-291 (637)
438 cd05119 RIO RIO kinase family,  98.5 2.2E-07 4.8E-12   86.7   6.0   51   20-74    114-165 (187)
439 KOG0601 Cyclin-dependent kinas  98.4 2.5E-07 5.5E-12  100.5   4.0  167    1-177   347-517 (524)
440 cd05120 APH_ChoK_like Aminogly  98.2   3E-06 6.6E-11   74.0   5.8   54   18-72     84-138 (155)
441 cd05146 RIO3_euk RIO kinase fa  97.9 2.5E-05 5.5E-10   75.6   7.2   55   16-74    120-175 (197)
442 cd05151 ChoK Choline Kinase (C  97.7   3E-05 6.6E-10   70.8   4.4   47   23-71     86-135 (170)
443 PRK15123 lipopolysaccharide co  97.7 0.00011 2.4E-09   74.4   8.1   65    6-72    122-194 (268)
444 TIGR01982 UbiB 2-polyprenylphe  97.7 6.2E-05 1.3E-09   81.2   6.5   68    1-74    239-308 (437)
445 PF06293 Kdo:  Lipopolysacchari  97.7  0.0001 2.2E-09   71.3   7.0   67    5-73    103-171 (206)
446 KOG1035 eIF-2alpha kinase GCN2  97.6 0.00019 4.1E-09   84.0   9.0  166    2-182   268-442 (1351)
447 PRK04750 ubiB putative ubiquin  97.4 0.00019 4.1E-09   79.3   5.5   65    1-75    242-316 (537)
448 KOG1243 Protein kinase [Genera  97.3 0.00075 1.6E-08   75.2   9.1  105    7-117    94-199 (690)
449 COG3642 Mn2+-dependent serine/  97.3 0.00045 9.7E-09   66.6   6.5   60    2-72     81-140 (204)
450 KOG3087 Serine/threonine prote  97.3  0.0006 1.3E-08   65.8   6.8   65    6-72     97-165 (229)
451 KOG3741 Poly(A) ribonuclease s  96.7   0.011 2.4E-07   64.6  10.7  132   15-174   388-521 (655)
452 cd05154 ACAD10_11_like Acyl-Co  96.5  0.0036 7.7E-08   59.2   4.9   32   41-72    174-206 (223)
453 PRK09902 hypothetical protein;  96.4  0.0073 1.6E-07   59.4   6.8   65    5-72    111-179 (216)
454 PF01163 RIO1:  RIO1 family;  I  96.4  0.0085 1.9E-07   57.7   7.1   51   20-74    106-157 (188)
455 PF12202 OSR1_C:  Oxidative-str  96.4  0.0029 6.3E-08   45.1   2.7   32  234-265     1-38  (38)
456 KOG1826 Ras GTPase activating   96.3  0.0009 1.9E-08   80.2  -0.5  170    2-178  1313-1496(2724)
457 KOG0576 Mitogen-activated prot  96.1  0.0012 2.7E-08   73.3  -0.6  149   21-180   337-490 (829)
458 PF06176 WaaY:  Lipopolysacchar  94.7   0.051 1.1E-06   54.0   5.3   43   25-71    140-182 (229)
459 cd05156 ChoK_euk Choline Kinas  91.8    0.57 1.2E-05   47.3   7.7   32   40-71    178-212 (302)
460 COG0478 RIO-like serine/threon  91.1    0.36 7.8E-06   49.5   5.3   51   18-71    200-250 (304)
461 PF12260 PIP49_C:  Protein-kina  90.3    0.61 1.3E-05   44.8   6.0   57   16-73     55-112 (188)
462 PF01636 APH:  Phosphotransfera  90.2    0.57 1.2E-05   44.1   5.7   33   40-72    165-197 (239)
463 cd05155 APH_ChoK_like_1 Unchar  89.2    0.75 1.6E-05   44.9   5.8   30   41-71    164-193 (235)
464 cd05157 ETNK_euk Ethanolamine   88.8    0.61 1.3E-05   45.1   4.8   30   42-71    171-200 (235)
465 TIGR02172 Fb_sc_TIGR02172 Fibr  88.8     1.1 2.3E-05   44.1   6.6   31   39-71    151-181 (226)
466 PRK05231 homoserine kinase; Pr  88.5     0.9   2E-05   46.3   6.1   29   42-71    188-216 (319)
467 TIGR02906 spore_CotS spore coa  88.0     1.2 2.7E-05   44.8   6.6   29   41-71    187-215 (313)
468 COG0661 AarF Predicted unusual  87.7       1 2.2E-05   50.0   6.1   67    3-75    249-317 (517)
469 TIGR00938 thrB_alt homoserine   86.6     1.1 2.4E-05   45.5   5.4   30   41-71    187-216 (307)
470 KOG0584 Serine/threonine prote  85.8    0.47   1E-05   53.0   2.3   53  247-299   336-388 (632)
471 PF10707 YrbL-PhoP_reg:  PhoP r  84.7     2.5 5.5E-05   41.1   6.6   56    4-66    107-165 (199)
472 PLN02236 choline kinase         84.5     1.4   3E-05   46.2   5.0   30   42-71    201-230 (344)
473 cd05150 APH Aminoglycoside 3'-  84.4    0.85 1.8E-05   44.5   3.2   31   40-71    162-192 (244)
474 cd05153 HomoserineK_II Homoser  83.5     1.7 3.7E-05   43.6   5.0   29   42-71    176-204 (296)
475 COG0510 ycfN Thiamine kinase a  83.1     1.9 4.1E-05   43.8   5.1   54   17-71    129-182 (269)
476 COG1718 RIO1 Serine/threonine   83.0     2.9 6.3E-05   42.5   6.2   52   19-74    165-217 (268)
477 PF01633 Choline_kinase:  Choli  82.6       1 2.2E-05   43.2   2.8   30   43-72    145-174 (211)
478 COG5072 ALK1 Serine/threonine   81.8     3.6 7.7E-05   44.2   6.6   52   18-72    319-370 (488)
479 TIGR02721 ycfN_thiK thiamine k  81.4     1.2 2.7E-05   43.9   3.0   29   42-72    147-175 (256)
480 smart00587 CHK ZnF_C4 abd HLH   81.1     3.3 7.2E-05   39.6   5.8   31   42-72    121-155 (196)
481 PRK10271 thiK thiamine kinase;  80.2     1.7 3.7E-05   42.1   3.4   29   42-72     78-106 (188)
482 PF07387 Seadorna_VP7:  Seadorn  79.2     1.9 4.1E-05   43.4   3.3   38   30-68    151-188 (308)
483 cd05152 MPH2' Macrolide 2'-Pho  78.0     1.9 4.1E-05   43.7   3.2   31   41-72    185-216 (276)
484 PRK06148 hypothetical protein;  77.1     5.1 0.00011   48.2   6.8   32   41-72    203-236 (1013)
485 TIGR02904 spore_ysxE spore coa  76.5     4.4 9.5E-05   41.4   5.4   29   42-71    197-225 (309)
486 PLN02421 phosphotransferase, a  74.9     5.6 0.00012   41.3   5.7   29   43-71    184-212 (330)
487 KOG1093 Predicted protein kina  74.6     1.8 3.9E-05   48.2   2.0   81   99-179   109-199 (725)
488 COG2334 Putative homoserine ki  72.3     3.3 7.1E-05   43.5   3.2   28   43-70    199-226 (331)
489 KOG1235 Predicted unusual prot  71.8      10 0.00022   42.4   7.1   62    9-75    293-357 (538)
490 COG3173 Predicted aminoglycosi  70.9     4.1 8.8E-05   42.7   3.5   32   42-74    199-230 (321)
491 PRK11768 serine/threonine prot  70.0      11 0.00024   38.9   6.6   28   41-71    196-223 (325)
492 PF05445 Pox_ser-thr_kin:  Poxv  68.1      11 0.00024   40.2   5.9   36   19-58    274-315 (434)
493 PRK06149 hypothetical protein;  67.2     6.5 0.00014   47.0   4.6   30   42-71    209-242 (972)
494 PHA03111 Ser/Thr kinase; Provi  65.1      12 0.00027   39.7   5.6   38   19-58    278-319 (444)
495 PF02958 EcKinase:  Ecdysteroid  65.1     8.7 0.00019   38.5   4.5   51   22-72    192-250 (294)
496 PF13095 FTA2:  Kinetochore Sim  63.6     9.7 0.00021   37.5   4.3   41   22-70    166-206 (207)
497 PLN02876 acyl-CoA dehydrogenas  62.9      11 0.00025   44.1   5.5   32   42-73    226-258 (822)
498 KOG2268 Serine/threonine prote  61.4      15 0.00033   39.1   5.4   45   23-70    205-249 (465)
499 PRK10593 hypothetical protein;  61.2      10 0.00022   38.8   4.2   29   40-68    192-221 (297)
500 PRK09550 mtnK methylthioribose  60.1      15 0.00033   39.6   5.4   30   39-70    221-250 (401)

No 1  
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00  E-value=4.5e-64  Score=535.01  Aligned_cols=453  Identities=46%  Similarity=0.667  Sum_probs=322.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      +||+|||++|++++++++.+.++.|++|||.||.|||++.||||||||||+||||+++.|.|||+|+|||+..... ...
T Consensus       124 L~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s-~ak  202 (632)
T KOG0584|consen  124 LFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS-HAK  202 (632)
T ss_pred             cccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc-ccc
Confidence            6999999999999999999999999999999999999999999999999999999999999999999999977653 455


Q ss_pred             cccCCCcccCccccccCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhhh
Q 010730           81 SVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE  160 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~  160 (502)
                      .++|||.|||||+++..|++.+|||||||||+||+|+.+||++|.+++|||++|.+|..|..+..+.++++++||.+||.
T Consensus       203 svIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~  282 (632)
T KOG0584|consen  203 SVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLA  282 (632)
T ss_pred             eeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhc
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcCCCCCHHHHhcCCCCcCCCCCCCC-------CCCCC--------Ccc-CCCCC--cchh-----------ccccccc-
Q 010730          161 NVSKRLPAKELLLDPFLASDAGEPLL-------IPQVP--------SFQ-NLNPN--GAVM-----------ELVPKFA-  210 (502)
Q Consensus       161 dP~kRpSa~ELL~hPff~~~~~~~l~-------~p~~p--------~~~-~~~~~--~~~~-----------e~~~~~~-  210 (502)
                      ....|+||.|||+||||+.+......       .+.+-        ... ....+  ....           ..+.... 
T Consensus       283 ~~~~R~sa~eLL~d~Ff~~d~g~~~~~~e~d~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~~~~D~~e~v~~em~~~~~  362 (632)
T KOG0584|consen  283 TKSERLSAKELLKDPFFDEDGGIVELAPEDDMSDPALSLSLRDEDGKKNKRPKANAIQFDYNLNTDESEEVAQEMVEEEI  362 (632)
T ss_pred             CchhccCHHHHhhChhhccccccccccchhhcccccccccccccchhhcCCcccccccceeecCCCchhHHHHHHHHhcc
Confidence            89999999999999999886442100       00000        000 00000  0000           0000110 


Q ss_pred             -cCcc------ccccccceecccCCCCCCceEEEEEEEcCCCCeeeeccCCCcccccHHHHHHHHHhcccCCCCCHHHHH
Q 010730          211 -VDSD------RRKSTDMTITGTMNPEDDTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWEPLEIA  283 (502)
Q Consensus       211 -~~~~------~~~~~~~~i~g~~~~e~~~i~L~l~i~d~~G~~~~i~f~fd~~~Dt~~~VA~EMV~~l~l~~~d~~~ia  283 (502)
                       ...+      ..+.+.+.|.|+.+.+...++|.|+|.+++|..++|+|+|++..|||.+||.|||++++++++++..||
T Consensus       363 ~~edd~~~v~r~~~~~~~~ikgkr~~~~~~~~l~l~i~~~~g~~r~i~fpf~~~~dta~~Va~eMv~el~~~dq~v~~ia  442 (632)
T KOG0584|consen  363 VSEDDSREVARLLKDTVFSIKGKRNDRQTEISLELRIADEDGLVRNIHFPFDLEGDTAPSVAHEMVEELEITDQPVVNIA  442 (632)
T ss_pred             CCcchHHHHHHHhccceeeechhhhcccccceeEeeccCCCCCcccccCCCcCCCcchhHHHHHHHhhcCCcccchhhHH
Confidence             0111      123477899999987766999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhCCCcccCCCC--CccccccccccCCCCCCCCCCCCCCcccCCCC--CCCCCCccccccCCCC-CCCCccc
Q 010730          284 EMIEQEISSLVPNWKECGSP--QFCHQHSFSYEDEDDDNDDDGIYHPFYSNSSH--SSSHASLPAFFTNNAN-SPPSWLQ  358 (502)
Q Consensus       284 ~~Id~~i~~l~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~  358 (502)
                      +|||.+|.+|+|.|+....-  ..+.||..                  .+.|.+  ++++....+.+..+.+ ....|-+
T Consensus       443 ~mid~~i~~L~p~~~~~~~~~~s~~~~~~~------------------~~~s~~~~~~s~~~~~~~~~~~~~~~~~~~~~  504 (632)
T KOG0584|consen  443 EMIDGEISALVPNWKASTPNDESPHEQHTD------------------NSVSIQRSSESATQSQKSFSSADPQQVAPFVQ  504 (632)
T ss_pred             HHHhchhhhcCCccCCCCCccccchhccCc------------------ccccccCCCccccccccccccccccccccccc
Confidence            99999999999999765411  22212221                  112221  1111111111111111 3344655


Q ss_pred             cccCCCCCCCCCCCCCCCcccccccccCCCCCCccccccCCCchhhhcccc-c--cccccCccccCCCCCCccccccccc
Q 010730          359 QEDLLGNDDASSNGSVSSFKYSSWDYHSGNEDDSEFSHRAGEPLCIARATQ-K--STRFCPEAAMNNDRCNSEDVNSRKA  435 (502)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~  435 (502)
                      +.   +.|..++.......+.....+....+.+.        .+..+..++ +  +-.||......-  .....+. -..
T Consensus       505 ~~---~~~~~~~~~~~r~~~~~~~~~~~~~~~~~--------~~~~q~~t~~~~~~~~~~~~~~~~~--~~~~~~~-~~~  570 (632)
T KOG0584|consen  505 QS---MEDPLSSDVESRFSKNELVQTQVSPLGER--------LVQCQLETHHKQETFEFDQPLSSPE--EIAKAMS-EQE  570 (632)
T ss_pred             cc---ccCCCccccccccccccccccccccchhh--------hhhhhhccccceeeecccccCCchh--hhhhhhh-ccc
Confidence            53   33332222112222222222222111111        110111222 2  445555443310  0000010 001


Q ss_pred             cCCCCCCCCCccccchhhhhhhhhhhhhHHHHHhhhhcccccccccccccC
Q 010730          436 CRSNSNNHRKLSRIRSLVDVRSQLLHRSLVEEIHKRRLFKTVGAVENIGFH  486 (502)
Q Consensus       436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  486 (502)
                      ++......+-.++.|++++...++||+...+...|+..+|+....+-.|++
T Consensus       571 ~~l~~e~~~~~~q~r~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  621 (632)
T KOG0584|consen  571 EQLKTELERIESQLRSLVQDALELLSRAVEEAKDKVIATKQKSVNSAHPAQ  621 (632)
T ss_pred             hhhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhhhhccccccccccCCC
Confidence            122224456788999999999999999999999999999998888887777


No 2  
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=4.8e-39  Score=330.02  Aligned_cols=178  Identities=26%  Similarity=0.393  Sum_probs=161.2

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCC--CCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGH--LGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~--~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.||+|.+++-.++.+.+..-+.+++|||.||.|||++|  |+||||||+|||++.+  .-.+||+|||+|+.......
T Consensus       257 ~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~G--I~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sf  334 (475)
T KOG0615|consen  257 YVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQG--IIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSF  334 (475)
T ss_pred             EecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcC--cccccCCcceEEeccCCcceEEEecccchhhcccccee
Confidence            6889999999999999999999999999999999999999  9999999999999765  23689999999999988888


Q ss_pred             cccccCCCcccCccccccC----CCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCC--CcccccccHHHH
Q 010730           79 AHSVIGTPEFMAPELYEED----YNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLP--GAFHRIQDAEAR  152 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~~----ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p--~~~~~~~s~~l~  152 (502)
                      +.+.||||.|.|||++..+    |..++||||+||+||.+|+|.+||++......++++|..|+++  +..|...+.+++
T Consensus       335 m~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~  414 (475)
T KOG0615|consen  335 MKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEAL  414 (475)
T ss_pred             hhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHH
Confidence            9999999999999999643    5569999999999999999999999866666689999999885  345566789999


Q ss_pred             HHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          153 RFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       153 ~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      +||..||. ||.+|||+.|+|+||||+..
T Consensus       415 dlI~~mL~VdP~~R~s~~eaL~hpW~~~~  443 (475)
T KOG0615|consen  415 DLINWMLVVDPENRPSADEALNHPWFKDA  443 (475)
T ss_pred             HHHHHhhEeCcccCcCHHHHhcChhhhcc
Confidence            99999998 99999999999999999754


No 3  
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00  E-value=9.8e-38  Score=317.51  Aligned_cols=176  Identities=33%  Similarity=0.577  Sum_probs=161.1

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHG-HDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs-~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      ||.||+|..++++.++++|..+..++.+||+||.|||. ++  ||||||||+|||++.. |+|||||||+++.+..+ ..
T Consensus       159 YMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~--IIHRDIKPsNlLvNsk-GeVKicDFGVS~~lvnS-~a  234 (364)
T KOG0581|consen  159 YMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERK--IIHRDIKPSNLLVNSK-GEVKICDFGVSGILVNS-IA  234 (364)
T ss_pred             hcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccC--eeeccCCHHHeeeccC-CCEEeccccccHHhhhh-hc
Confidence            79999999999999999999999999999999999995 77  9999999999999987 89999999999988765 67


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCC----CCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSE----CSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~----~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      .+++||..|||||.+.+ .|+.++||||||+.++||++|++||..    ..+..+++..|..+..|.......++++++|
T Consensus       235 ~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~F  314 (364)
T KOG0581|consen  235 NTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSF  314 (364)
T ss_pred             ccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHH
Confidence            89999999999998876 599999999999999999999999976    2467888999998887755555689999999


Q ss_pred             HHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          155 VGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      |..||. ||.+|++++|||+|||++..
T Consensus       315 V~~CL~Kdp~~R~s~~qLl~Hpfi~~~  341 (364)
T KOG0581|consen  315 VSCCLRKDPSERPSAKQLLQHPFIKKF  341 (364)
T ss_pred             HHHHhcCCcccCCCHHHHhcCHHHhhc
Confidence            999998 99999999999999999754


No 4  
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=1.6e-37  Score=333.02  Aligned_cols=178  Identities=28%  Similarity=0.535  Sum_probs=165.4

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.||.|++|+.+.+++.+.+++.+++||+.|+.|||..+  |+||||||+|+|++.+ +.|||+|||+|..-.++..+.
T Consensus        93 yv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~--icHRDLKpENlLLd~~-~nIKIADFGMAsLe~~gklLe  169 (786)
T KOG0588|consen   93 YVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFN--ICHRDLKPENLLLDVK-NNIKIADFGMASLEVPGKLLE  169 (786)
T ss_pred             ecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhc--ceeccCCchhhhhhcc-cCEeeeccceeecccCCcccc
Confidence            6899999999999999999999999999999999999999  9999999999999988 569999999999888888899


Q ss_pred             cccCCCcccCccccccC-C-CCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           81 SVIGTPEFMAPELYEED-Y-NELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~~-y-s~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      +.||+|.|.|||++.+. | +.++||||+|||||.||||.+||.+ +|...++.||..|.+  ..+..+++++++||.+|
T Consensus       170 TSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-dNir~LLlKV~~G~f--~MPs~Is~eaQdLLr~m  246 (786)
T KOG0588|consen  170 TSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-DNIRVLLLKVQRGVF--EMPSNISSEAQDLLRRM  246 (786)
T ss_pred             ccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-ccHHHHHHHHHcCcc--cCCCcCCHHHHHHHHHH
Confidence            99999999999988764 4 7799999999999999999999986 899999999999998  45577899999999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcCCCCCC
Q 010730          159 LE-NVSKRLPAKELLLDPFLASDAGEP  184 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~~~~~~  184 (502)
                      |. ||.+|+|.+||++|||+......+
T Consensus       247 l~VDp~~RiT~~eI~kHP~l~g~~~~~  273 (786)
T KOG0588|consen  247 LDVDPSTRITTEEILKHPFLSGYTSLP  273 (786)
T ss_pred             hccCccccccHHHHhhCchhhcCCCCC
Confidence            99 999999999999999998765443


No 5  
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00  E-value=1.6e-36  Score=308.42  Aligned_cols=180  Identities=32%  Similarity=0.532  Sum_probs=162.5

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceec-cCCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAIL-RGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~-~~~~~~   79 (502)
                      |+.||.|+..+++.+.+++..++.|+..|+.||.|||+.|  ||||||||+|||++.. |+++|+||||++.. ..+...
T Consensus       106 ~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~g--IiyRDlKPENILLd~~-GHi~LtDFgL~k~~~~~~~~t  182 (357)
T KOG0598|consen  106 YLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKG--IIYRDLKPENILLDEQ-GHIKLTDFGLCKEDLKDGDAT  182 (357)
T ss_pred             ccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCC--eeeccCCHHHeeecCC-CcEEEeccccchhcccCCCcc
Confidence            6889999999999999999999999999999999999999  9999999999999987 89999999999854 444566


Q ss_pred             ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      .++|||+.|||||++. ..|+.++|+||||+++|+|++|.+||.+ .+..+++++|..++.+ ..+...+.+++++|.++
T Consensus       183 ~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~-~~~~~~~~~I~~~k~~-~~p~~ls~~ardll~~L  260 (357)
T KOG0598|consen  183 RTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA-EDVKKMYDKILKGKLP-LPPGYLSEEARDLLKKL  260 (357)
T ss_pred             ccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC-ccHHHHHHHHhcCcCC-CCCccCCHHHHHHHHHH
Confidence            7899999999999875 5699999999999999999999999977 8889999999999854 34455689999999999


Q ss_pred             hh-CcCCCC----CHHHHhcCCCCcCCCCCCC
Q 010730          159 LE-NVSKRL----PAKELLLDPFLASDAGEPL  185 (502)
Q Consensus       159 L~-dP~kRp----Sa~ELL~hPff~~~~~~~l  185 (502)
                      |. +|.+|+    .+.++-.||||...+|..+
T Consensus       261 L~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l  292 (357)
T KOG0598|consen  261 LKRDPRQRLGGPGDAEEIKRHPFFKGINWEKL  292 (357)
T ss_pred             hccCHHHhcCCCCChHHhhcCcccccCCHHHH
Confidence            98 999996    5899999999998877553


No 6  
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00  E-value=2e-36  Score=319.05  Aligned_cols=179  Identities=32%  Similarity=0.544  Sum_probs=161.5

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC--
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ--   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~--   78 (502)
                      |+.+|+|.+||++++.|++.-++.|+.||+.||+|||++|  ||||||||||||++++ +++||+|||-|+.+.....  
T Consensus       155 ~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~G--IIHRDlKPENILLd~d-mhikITDFGsAK~l~~~~~~~  231 (604)
T KOG0592|consen  155 YAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNG--IIHRDLKPENILLDKD-GHIKITDFGSAKILSPSQKSQ  231 (604)
T ss_pred             ecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcC--ceeccCChhheeEcCC-CcEEEeeccccccCChhhccc
Confidence            6789999999999999999999999999999999999999  9999999999999998 8999999999998753211  


Q ss_pred             ------------cccccCCCcccCccccccC-CCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccc
Q 010730           79 ------------AHSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHR  145 (502)
Q Consensus        79 ------------~~s~vGTp~Y~APEvl~~~-ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~  145 (502)
                                  ..++|||..|++||+|... .+..+|||+||||||.|++|.+||.+ .|.-.++++|+.-.+  .|+.
T Consensus       232 ~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra-~NeyliFqkI~~l~y--~fp~  308 (604)
T KOG0592|consen  232 ENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRA-ANEYLIFQKIQALDY--EFPE  308 (604)
T ss_pred             cCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcc-ccHHHHHHHHHHhcc--cCCC
Confidence                        2568999999999999755 78899999999999999999999977 788899999998766  4556


Q ss_pred             cccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCCCCCC
Q 010730          146 IQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGEPL  185 (502)
Q Consensus       146 ~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~~~~l  185 (502)
                      ..++.+++||.++|. ||.+|+|+.||.+||||..-.+.-+
T Consensus       309 ~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~nl  349 (604)
T KOG0592|consen  309 GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWENL  349 (604)
T ss_pred             CCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhhh
Confidence            667899999999998 9999999999999999998777554


No 7  
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=2.9e-36  Score=321.68  Aligned_cols=174  Identities=32%  Similarity=0.553  Sum_probs=159.5

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~~   79 (502)
                      |+..|+|.+++++.+.++|.+++.+++||+.||.|||+++  |||||||..|||++.+ -+|||+|||||..+... ...
T Consensus        99 LC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~--IiHRDLKLGNlfL~~~-~~VKIgDFGLAt~le~~~Erk  175 (592)
T KOG0575|consen   99 LCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLG--IIHRDLKLGNLFLNEN-MNVKIGDFGLATQLEYDGERK  175 (592)
T ss_pred             ecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcC--ceecccchhheeecCc-CcEEecccceeeeecCccccc
Confidence            5778999999999999999999999999999999999999  9999999999999998 48999999999998744 667


Q ss_pred             ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      .+.||||.|+|||++. ...+..+||||+||+||.||+|++||.. .+..+.|++|....+  .++...+.++++||.+|
T Consensus       176 ~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet-k~vkety~~Ik~~~Y--~~P~~ls~~A~dLI~~l  252 (592)
T KOG0575|consen  176 KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET-KTVKETYNKIKLNEY--SMPSHLSAEAKDLIRKL  252 (592)
T ss_pred             ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc-chHHHHHHHHHhcCc--ccccccCHHHHHHHHHH
Confidence            8899999999999886 4599999999999999999999999976 778999999998877  45557789999999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcCC
Q 010730          159 LE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      |. +|.+|||++++|.|+||...
T Consensus       253 L~~~P~~Rpsl~~vL~h~Ff~~g  275 (592)
T KOG0575|consen  253 LRPNPSERPSLDEVLDHPFFKSG  275 (592)
T ss_pred             hcCCcccCCCHHHHhcCHhhhCC
Confidence            99 99999999999999999443


No 8  
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00  E-value=2.6e-36  Score=299.66  Aligned_cols=178  Identities=33%  Similarity=0.615  Sum_probs=163.5

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |..||.|+.|+++.+++++..++.|+.||+.||+|||+.+  |++|||||||||++.+ |.+||+|||+|+.+...  ..
T Consensus       125 yv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~--iiYRDLKPENiLlD~~-G~iKitDFGFAK~v~~r--T~  199 (355)
T KOG0616|consen  125 YVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLD--IIYRDLKPENLLLDQN-GHIKITDFGFAKRVSGR--TW  199 (355)
T ss_pred             ccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcC--eeeccCChHHeeeccC-CcEEEEeccceEEecCc--EE
Confidence            5789999999999999999999999999999999999999  9999999999999987 89999999999988653  67


Q ss_pred             cccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhh
Q 010730           81 SVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCL  159 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL  159 (502)
                      +.||||.|+|||++.. .|+.++|.|||||++|||++|.+||.. .++.++|++|..++.  .++...++++++||.++|
T Consensus       200 TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~-~~~~~iY~KI~~~~v--~fP~~fs~~~kdLl~~LL  276 (355)
T KOG0616|consen  200 TLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYD-DNPIQIYEKILEGKV--KFPSYFSSDAKDLLKKLL  276 (355)
T ss_pred             EecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcC-CChHHHHHHHHhCcc--cCCcccCHHHHHHHHHHH
Confidence            8999999999998864 599999999999999999999999987 788999999999988  567777899999999999


Q ss_pred             h-CcCCCC-----CHHHHhcCCCCcCCCCCCCC
Q 010730          160 E-NVSKRL-----PAKELLLDPFLASDAGEPLL  186 (502)
Q Consensus       160 ~-dP~kRp-----Sa~ELL~hPff~~~~~~~l~  186 (502)
                      + |-.+|.     ...++..||||+...|..+.
T Consensus       277 ~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~  309 (355)
T KOG0616|consen  277 QVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAIL  309 (355)
T ss_pred             hhhhHhhhcCcCCCccccccCcccccccHHHHh
Confidence            8 999994     47899999999988876643


No 9  
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.1e-35  Score=310.91  Aligned_cols=175  Identities=29%  Similarity=0.587  Sum_probs=159.4

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceec-cCCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAIL-RGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~-~~~~~~   79 (502)
                      |+.||+|.+|+.+.+++.+..++.+++||+.||+|||++|  |+||||||+|||++.+.+.+||+|||++... .....+
T Consensus       101 y~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~g--i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l  178 (370)
T KOG0583|consen  101 YCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRG--IVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLL  178 (370)
T ss_pred             ecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcc
Confidence            6789999999999999999999999999999999999999  9999999999999987569999999999988 466778


Q ss_pred             ccccCCCcccCcccccc-C-C-CCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccc-cHHHHHHH
Q 010730           80 HSVIGTPEFMAPELYEE-D-Y-NELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQ-DAEARRFV  155 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~-y-s~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~-s~~l~~LI  155 (502)
                      .+.+|||.|+|||++.+ . | +.++||||+||+||.|++|.+||.+ .+...++.+|..+.+.  ++... +++++.||
T Consensus       179 ~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d-~~~~~l~~ki~~~~~~--~p~~~~S~~~~~Li  255 (370)
T KOG0583|consen  179 KTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD-SNVPNLYRKIRKGEFK--IPSYLLSPEARSLI  255 (370)
T ss_pred             cCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-ccHHHHHHHHhcCCcc--CCCCcCCHHHHHHH
Confidence            99999999999999975 3 5 5789999999999999999999988 7888899999988774  33334 89999999


Q ss_pred             HHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          156 GKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      .+||. +|.+|+++.+++.||||+..
T Consensus       256 ~~mL~~~P~~R~t~~~i~~h~w~~~~  281 (370)
T KOG0583|consen  256 EKMLVPDPSTRITLLEILEHPWFQKE  281 (370)
T ss_pred             HHHcCCCcccCCCHHHHhhChhhccC
Confidence            99999 99999999999999999873


No 10 
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00  E-value=9e-36  Score=293.10  Aligned_cols=175  Identities=27%  Similarity=0.523  Sum_probs=158.6

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      +|..|.|++|+...-.+++++.+.+++||+.|++|||..+  ||||||||+|||++++ -++||.|||+++.+..+.++.
T Consensus       104 l~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~--IVHRDLKpENILlddn-~~i~isDFGFa~~l~~GekLr  180 (411)
T KOG0599|consen  104 LMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARN--IVHRDLKPENILLDDN-MNIKISDFGFACQLEPGEKLR  180 (411)
T ss_pred             hcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhh--hhhcccChhheeeccc-cceEEeccceeeccCCchhHH
Confidence            4788999999999889999999999999999999999999  9999999999999988 589999999999999999999


Q ss_pred             cccCCCcccCccccc-------cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCC--CcccccccHHH
Q 010730           81 SVIGTPEFMAPELYE-------EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLP--GAFHRIQDAEA  151 (502)
Q Consensus        81 s~vGTp~Y~APEvl~-------~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p--~~~~~~~s~~l  151 (502)
                      ..||||+|+|||.++       ..|+..+|+|++|||||.||.|.+||.. ...--+.+.|+.|++.  .+.|...+..+
T Consensus       181 elCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwH-RkQmlMLR~ImeGkyqF~speWadis~~~  259 (411)
T KOG0599|consen  181 ELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWH-RKQMLMLRMIMEGKYQFRSPEWADISATV  259 (411)
T ss_pred             HhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhH-HHHHHHHHHHHhcccccCCcchhhccccH
Confidence            999999999999774       3599999999999999999999999975 2333457888898874  45566778899


Q ss_pred             HHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          152 RRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       152 ~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                      ++||.+||+ ||.+|+|++|+|+||||..
T Consensus       260 KdLIsrlLqVdp~~Ritake~LaHpff~q  288 (411)
T KOG0599|consen  260 KDLISRLLQVDPTKRITAKEALAHPFFIQ  288 (411)
T ss_pred             HHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence            999999999 9999999999999999954


No 11 
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00  E-value=2.8e-35  Score=300.39  Aligned_cols=178  Identities=36%  Similarity=0.607  Sum_probs=153.0

Q ss_pred             CCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccC----
Q 010730            1 MFTSGTLREYRKKYT-RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG----   75 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~-~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~----   75 (502)
                      |+.||+|.+++++++ +|++..++.+++|||+||+|||++|  ||||||||+|||++...+.+||+|||+++....    
T Consensus        97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g--~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~  174 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKG--IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK  174 (313)
T ss_pred             ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeccCcccceEEEeCCCCeEEeccCcccccccccccc
Confidence            789999999999988 7999999999999999999999999  999999999999998337999999999987653    


Q ss_pred             CCCcccccCCCcccCccccccCC--CCcccchhHHHHHHHHhhccCCCCC-CCChHHHHHHhhcCCCCCcccccccHHHH
Q 010730           76 SQQAHSVIGTPEFMAPELYEEDY--NELVDIYSFGMCVLEMLTSEYPYSE-CSNPAQIYKKVTSGKLPGAFHRIQDAEAR  152 (502)
Q Consensus        76 ~~~~~s~vGTp~Y~APEvl~~~y--s~~~DIWSLGviLyeLLTG~~Pf~~-~~~~~ql~~kI~~g~~p~~~~~~~s~~l~  152 (502)
                      ......+.|||.|||||++...+  ..++|||||||++.||+||..||.+ ......++........| .++...+.+++
T Consensus       175 ~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P-~ip~~ls~~a~  253 (313)
T KOG0198|consen  175 SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLP-EIPDSLSDEAK  253 (313)
T ss_pred             ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCC-CCCcccCHHHH
Confidence            12244688999999999987443  3499999999999999999999987 34455566666566555 67777899999


Q ss_pred             HHHHHhhh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          153 RFVGKCLE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       153 ~LI~kcL~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                      +||.+|+. +|.+||||.+||.|||++...
T Consensus       254 ~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~  283 (313)
T KOG0198|consen  254 DFLRKCFKRDPEKRPTAEELLEHPFLKQNS  283 (313)
T ss_pred             HHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence            99999999 999999999999999997654


No 12 
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00  E-value=4.6e-35  Score=284.63  Aligned_cols=177  Identities=27%  Similarity=0.502  Sum_probs=159.7

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCC--CCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGH--LGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~--~g~vKL~DFGlA~~~~~~~~   78 (502)
                      +|+||+|..-|-+.-.+++..+..+++|||.+|.|||.++  |||||+||+|+++...  ...|||+|||+|..+..+..
T Consensus        91 ~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~--IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~  168 (355)
T KOG0033|consen   91 LVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNG--IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA  168 (355)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--ceeccCChhheeeeeccCCCceeecccceEEEeCCccc
Confidence            5899999988877677899999999999999999999999  9999999999999643  35799999999999887666


Q ss_pred             cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC--CCcccccccHHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL--PGAFHRIQDAEARRFV  155 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~--p~~~~~~~s~~l~~LI  155 (502)
                      ...++|||.|||||++. ..|+..+|||+.|||||.||.|.+||.+ .....+|+.|..|.+  +.+.|...++++++||
T Consensus       169 ~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~-~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~Lv  247 (355)
T KOG0033|consen  169 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD-EDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLI  247 (355)
T ss_pred             cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCC-ccHHHHHHHHhccccCCCCcccCcCCHHHHHHH
Confidence            77899999999999986 4699999999999999999999999987 678899999999875  5556777899999999


Q ss_pred             HHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          156 GKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      .+||. ||.+|+||.|+|+|||+...
T Consensus       248 rrML~~dP~kRIta~EAL~HpWi~~r  273 (355)
T KOG0033|consen  248 RRMLTVNPKKRITADEALKHPWICNR  273 (355)
T ss_pred             HHHhccChhhhccHHHHhCCchhcch
Confidence            99998 99999999999999999754


No 13 
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.9e-34  Score=305.70  Aligned_cols=175  Identities=33%  Similarity=0.583  Sum_probs=159.6

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~   79 (502)
                      ||.||+|-+.+.+.. ++|.+|+.+++++|.||+|||.+|  |||||||.+|||+..+ |.+||+|||++..+.... +.
T Consensus       351 ym~ggsLTDvVt~~~-~~E~qIA~Icre~l~aL~fLH~~g--IiHrDIKSDnILL~~~-g~vKltDFGFcaqi~~~~~KR  426 (550)
T KOG0578|consen  351 YMEGGSLTDVVTKTR-MTEGQIAAICREILQGLKFLHARG--IIHRDIKSDNILLTMD-GSVKLTDFGFCAQISEEQSKR  426 (550)
T ss_pred             ecCCCchhhhhhccc-ccHHHHHHHHHHHHHHHHHHHhcc--eeeeccccceeEeccC-CcEEEeeeeeeeccccccCcc
Confidence            789999999997754 999999999999999999999999  9999999999999877 899999999999876544 56


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      .+.+|||+|||||++.. .|++++||||||++++||+-|++||........+|..-..|......+...++.+++|+.+|
T Consensus       427 ~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~c  506 (550)
T KOG0578|consen  427 STMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRC  506 (550)
T ss_pred             ccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHH
Confidence            78999999999999875 59999999999999999999999998755567788888888887778888899999999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcC
Q 010730          159 LE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~  179 (502)
                      |+ |+.+|++|.|||+||||+.
T Consensus       507 L~~dv~~RasA~eLL~HpFl~~  528 (550)
T KOG0578|consen  507 LVVDVEQRASAKELLEHPFLKM  528 (550)
T ss_pred             hhcchhcCCCHHHHhcChhhhh
Confidence            99 9999999999999999954


No 14 
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00  E-value=3.9e-34  Score=301.63  Aligned_cols=182  Identities=26%  Similarity=0.431  Sum_probs=158.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccC-----
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-----   75 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~-----   75 (502)
                      |+.||++.++|.+.+.|++..++.|+.+++.|++.||.+|  +|||||||+|+||+.. |++||.||||++.+..     
T Consensus       222 ylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~g--yIHRDIKPdNlLiD~~-GHiKLSDFGLs~gl~~~~~~~  298 (550)
T KOG0605|consen  222 YLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLG--YIHRDIKPDNLLIDAK-GHIKLSDFGLSTGLDKKHRIE  298 (550)
T ss_pred             ecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcC--cccccCChhheeecCC-CCEeeccccccchhhhhhhhh
Confidence            7899999999999999999999999999999999999999  9999999999999987 9999999999854311     


Q ss_pred             --------------------C-----------------------CCcccccCCCcccCcccccc-CCCCcccchhHHHHH
Q 010730           76 --------------------S-----------------------QQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCV  111 (502)
Q Consensus        76 --------------------~-----------------------~~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviL  111 (502)
                                          .                       ....+.+|||.||||||+.+ +|+..+|+|||||||
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Im  378 (550)
T KOG0605|consen  299 SYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIM  378 (550)
T ss_pred             hhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHH
Confidence                                0                       01135689999999998865 499999999999999


Q ss_pred             HHHhhccCCCCCCCChHHHHHHhhcCC--CCCcccccccHHHHHHHHHhhhCcCCCCC---HHHHhcCCCCcCCCCCCCC
Q 010730          112 LEMLTSEYPYSECSNPAQIYKKVTSGK--LPGAFHRIQDAEARRFVGKCLENVSKRLP---AKELLLDPFLASDAGEPLL  186 (502)
Q Consensus       112 yeLLTG~~Pf~~~~~~~ql~~kI~~g~--~p~~~~~~~s~~l~~LI~kcL~dP~kRpS---a~ELL~hPff~~~~~~~l~  186 (502)
                      ||||.|.+||.. .++.+.|++|...+  +..+-....+.++++||.+||.||.+|+.   ++||..||||+.-.|.-+.
T Consensus       379 yEmLvGyPPF~s-~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~d~~~RLG~~G~~EIK~HPfF~~v~W~~l~  457 (550)
T KOG0605|consen  379 YEMLVGYPPFCS-ETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLCDPENRLGSKGAEEIKKHPFFKGVDWDHLR  457 (550)
T ss_pred             HHHHhCCCCCCC-CCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhcCHHHhcCcccHHHHhcCCccccCCcchhh
Confidence            999999999987 89999999999876  33333334579999999999999999986   9999999999998886643


No 15 
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00  E-value=2.4e-33  Score=278.88  Aligned_cols=181  Identities=22%  Similarity=0.375  Sum_probs=159.1

Q ss_pred             CCCCCcHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCC--CCcEEEEecCCceeccCC
Q 010730            1 MFTSGTLREYRKKYTR--VDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGH--LGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~--L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~--~g~vKL~DFGlA~~~~~~   76 (502)
                      +|.||.|+..|+..+.  ++|+++..+++||..|+.|||+.+  |.||||||+|+|...+  +..+||+|||+|+.....
T Consensus       140 ~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n--IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~  217 (400)
T KOG0604|consen  140 CMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN--IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP  217 (400)
T ss_pred             cccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc--hhhccCChhheeeecCCCCcceEecccccccccCCC
Confidence            4789999999988765  999999999999999999999999  9999999999999754  357999999999988777


Q ss_pred             CCcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCC---hHHHHHHhhcCCC--CCcccccccHH
Q 010730           77 QQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSN---PAQIYKKVTSGKL--PGAFHRIQDAE  150 (502)
Q Consensus        77 ~~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~---~~ql~~kI~~g~~--p~~~~~~~s~~  150 (502)
                      ..+.+.+.||+|.|||++. .+|+..+|+||+|||+|.||||.+||+....   ...+-.+|..|.+  |.+.|...+.+
T Consensus       218 ~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~  297 (400)
T KOG0604|consen  218 GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEA  297 (400)
T ss_pred             ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHH
Confidence            7788899999999999996 5699999999999999999999999976432   2345677887765  56667778999


Q ss_pred             HHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCCCC
Q 010730          151 ARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGE  183 (502)
Q Consensus       151 l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~~~  183 (502)
                      ++++|+++|. +|.+|+|+.+++.|||+......
T Consensus       298 aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~v  331 (400)
T KOG0604|consen  298 AKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAV  331 (400)
T ss_pred             HHHHHHHHhcCCchhheeHHHhhcCchhcccccC
Confidence            9999999998 99999999999999999865443


No 16 
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=6.1e-33  Score=274.18  Aligned_cols=170  Identities=29%  Similarity=0.513  Sum_probs=151.2

Q ss_pred             CCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCCC--eEecCCCCCcEEEeCCCCcEEEEecCCceecc
Q 010730            1 MFTSGTLREYRKKY----TRVDIRAVKNWARQILRGIAYLHGHDPP--VIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR   74 (502)
Q Consensus         1 ~~tgGsL~~yi~k~----~~L~e~~i~~i~~QIL~gL~YLHs~g~~--IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~   74 (502)
                      |+.+|+|.+.|+.+    +.++++.+++++.|++.||..||+.-+.  |+||||||.|||++.+ |.|||+||||++.+.
T Consensus       101 ~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~-gvvKLGDfGL~r~l~  179 (375)
T KOG0591|consen  101 LCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTAN-GVVKLGDFGLGRFLS  179 (375)
T ss_pred             hhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCC-CceeeccchhHhHhc
Confidence            57789999998653    5699999999999999999999985444  9999999999999987 899999999999886


Q ss_pred             CCC-CcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHH
Q 010730           75 GSQ-QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEAR  152 (502)
Q Consensus        75 ~~~-~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~  152 (502)
                      ... ..++.+|||.||+||++. ..|+.++||||+||++|||..-++||.+ .+..++.++|.+|.+|+.+....+..++
T Consensus       180 s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g-~n~~~L~~KI~qgd~~~~p~~~YS~~l~  258 (375)
T KOG0591|consen  180 SKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYG-DNLLSLCKKIEQGDYPPLPDEHYSTDLR  258 (375)
T ss_pred             chhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccc-ccHHHHHHHHHcCCCCCCcHHHhhhHHH
Confidence            543 467899999999999876 5699999999999999999999999988 6999999999999998777688899999


Q ss_pred             HHHHHhhh-CcCCCCCHHHHh
Q 010730          153 RFVGKCLE-NVSKRLPAKELL  172 (502)
Q Consensus       153 ~LI~kcL~-dP~kRpSa~ELL  172 (502)
                      .+|..|+. ||..||+.-.++
T Consensus       259 ~li~~ci~vd~~~RP~t~~~v  279 (375)
T KOG0591|consen  259 ELINMCIAVDPEQRPDTVPYV  279 (375)
T ss_pred             HHHHHHccCCcccCCCcchHH
Confidence            99999998 999999863333


No 17 
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.98  E-value=2.8e-32  Score=276.94  Aligned_cols=176  Identities=28%  Similarity=0.494  Sum_probs=152.1

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.||+|.+++.+.+.+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++... .....
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--ivHrDlkp~NIll~~~-~~~kl~DfG~a~~~~~~~~~~  152 (323)
T cd05571          76 YANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCD--VVYRDLKLENLMLDKD-GHIKITDFGLCKEGISDGATM  152 (323)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECCC-CCEEEeeCCCCcccccCCCcc
Confidence            6789999999999899999999999999999999999998  9999999999999876 789999999987532 22334


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ...+||+.|+|||++.+ .|+.++|||||||++|+|++|..||.. .+...++..+..+..  .++...+.++++||.+|
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~-~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~  229 (323)
T cd05571         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELILMEEI--RFPRTLSPEAKSLLAGL  229 (323)
T ss_pred             cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCC-CCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHH
Confidence            55789999999998864 589999999999999999999999976 556677777766544  34455688999999999


Q ss_pred             hh-CcCCCC-----CHHHHhcCCCCcCCCC
Q 010730          159 LE-NVSKRL-----PAKELLLDPFLASDAG  182 (502)
Q Consensus       159 L~-dP~kRp-----Sa~ELL~hPff~~~~~  182 (502)
                      |. ||.+||     ++.++++||||....+
T Consensus       230 L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~  259 (323)
T cd05571         230 LKKDPKQRLGGGPEDAKEIMEHRFFASINW  259 (323)
T ss_pred             ccCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence            98 999999     8999999999987544


No 18 
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98  E-value=1.5e-32  Score=296.38  Aligned_cols=178  Identities=28%  Similarity=0.524  Sum_probs=157.3

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |..||++.. +++.+.+++.+++.|+..|+.||+|||.+|  ||+||||.+|||++.. |.+||+|||+++... .+..+
T Consensus       450 y~~Ggdm~~-~~~~~~F~e~rarfyaAev~l~L~fLH~~~--IIYRDlKLdNiLLD~e-Gh~kiADFGlcKe~m~~g~~T  525 (694)
T KOG0694|consen  450 YVAGGDLMH-HIHTDVFSEPRARFYAAEVVLGLQFLHENG--IIYRDLKLDNLLLDTE-GHVKIADFGLCKEGMGQGDRT  525 (694)
T ss_pred             ecCCCcEEE-EEecccccHHHHHHHHHHHHHHHHHHHhcC--ceeeecchhheEEccc-CcEEecccccccccCCCCCcc
Confidence            678899443 345578999999999999999999999999  9999999999999987 899999999998743 55677


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      .++||||.|||||++.+ .|+.++|+|||||+|||||+|++||.+ ++.++++..|.....  .++...+.++.+++.++
T Consensus       526 sTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g-ddEee~FdsI~~d~~--~yP~~ls~ea~~il~~l  602 (694)
T KOG0694|consen  526 STFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG-DDEEEVFDSIVNDEV--RYPRFLSKEAIAIMRRL  602 (694)
T ss_pred             ccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHhcCCC--CCCCcccHHHHHHHHHH
Confidence            89999999999999865 599999999999999999999999987 888999999987655  35556788999999999


Q ss_pred             hh-CcCCCCC-----HHHHhcCCCCcCCCCCCC
Q 010730          159 LE-NVSKRLP-----AKELLLDPFLASDAGEPL  185 (502)
Q Consensus       159 L~-dP~kRpS-----a~ELL~hPff~~~~~~~l  185 (502)
                      |. +|.+|+.     +.+|.+||||+..+|..+
T Consensus       603 l~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L  635 (694)
T KOG0694|consen  603 LRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDL  635 (694)
T ss_pred             hccCcccccCCCCCCchhhhhCCccccCCHHHH
Confidence            98 9999986     689999999998887653


No 19 
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.97  E-value=8.7e-32  Score=268.88  Aligned_cols=174  Identities=32%  Similarity=0.548  Sum_probs=152.3

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.+|+|.+++.+.+.+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++.....  ..
T Consensus        82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~NIli~~~-~~~kl~Dfg~~~~~~~~--~~  156 (291)
T cd05612          82 YVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKE--IVYRDLKPENILLDKE-GHIKLTDFGFAKKLRDR--TW  156 (291)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCC-CCEEEEecCcchhccCC--cc
Confidence            6789999999999889999999999999999999999998  9999999999999876 79999999999765432  33


Q ss_pred             cccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhh
Q 010730           81 SVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCL  159 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL  159 (502)
                      ..+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+ .+..++++.+..+..  .++...+..+++||.+||
T Consensus       157 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~-~~~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~l  233 (291)
T cd05612         157 TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFD-DNPFGIYEKILAGKL--EFPRHLDLYAKDLIKKLL  233 (291)
T ss_pred             cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhCCc--CCCccCCHHHHHHHHHHc
Confidence            4679999999998864 488999999999999999999999976 567788888887765  344455889999999999


Q ss_pred             h-CcCCCCC-----HHHHhcCCCCcCCCC
Q 010730          160 E-NVSKRLP-----AKELLLDPFLASDAG  182 (502)
Q Consensus       160 ~-dP~kRpS-----a~ELL~hPff~~~~~  182 (502)
                      . ||.+|++     +.+++.||||....+
T Consensus       234 ~~dp~~R~~~~~~~~~~~l~h~~~~~~~~  262 (291)
T cd05612         234 VVDRTRRLGNMKNGADDVKNHRWFKSVDW  262 (291)
T ss_pred             CCCHHHccCCccCCHHHHhcCccccCCCH
Confidence            9 9999995     999999999976444


No 20 
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97  E-value=1.1e-31  Score=281.88  Aligned_cols=176  Identities=31%  Similarity=0.528  Sum_probs=157.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCC---CcEEEEecCCceeccCCC
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHL---GQIKIGDLGLAAILRGSQ   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~---g~vKL~DFGlA~~~~~~~   77 (502)
                      |+.||+|++.+.+. .+++..+..+++||+.++.|||+.|  |+||||||+|+|+....   +.+|++|||++.......
T Consensus       117 L~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~g--vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~  193 (382)
T KOG0032|consen  117 LCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLG--VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE  193 (382)
T ss_pred             ecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc
Confidence            57899999999887 5999999999999999999999998  99999999999996542   479999999999988766


Q ss_pred             CcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC--CCcccccccHHHHHH
Q 010730           78 QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL--PGAFHRIQDAEARRF  154 (502)
Q Consensus        78 ~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~--p~~~~~~~s~~l~~L  154 (502)
                      .....+|||.|+|||++. ..|+..+||||+||++|.|++|.+||.+ ......+.+|..+.+  +...|...+..+++|
T Consensus       194 ~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~-~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~  272 (382)
T KOG0032|consen  194 RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWG-ETEFEIFLAILRGDFDFTSEPWDDISESAKDF  272 (382)
T ss_pred             eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcC-CChhHHHHHHHcCCCCCCCCCccccCHHHHHH
Confidence            788999999999999998 6799999999999999999999999987 555666778888765  455666679999999


Q ss_pred             HHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          155 VGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      |.+||. ||.+|+||.++|+|||++..
T Consensus       273 i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  273 IRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             HHHhcccCcccCCCHHHHhcCccccCC
Confidence            999998 99999999999999999864


No 21 
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.97  E-value=1.1e-31  Score=273.57  Aligned_cols=175  Identities=27%  Similarity=0.527  Sum_probs=153.2

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.||+|.+++.+.+.+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||++......  ..
T Consensus        99 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~-~~~kl~Dfg~~~~~~~~--~~  173 (329)
T PTZ00263         99 FVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKD--IIYRDLKPENLLLDNK-GHVKVTDFGFAKKVPDR--TF  173 (329)
T ss_pred             CCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEECCC-CCEEEeeccCceEcCCC--cc
Confidence            5789999999999899999999999999999999999998  9999999999999876 79999999999876432  33


Q ss_pred             cccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhh
Q 010730           81 SVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCL  159 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL  159 (502)
                      ...||+.|+|||++.+ .++.++|||||||++|+|++|..||.+ .+..++++++..+..+  ++...+..+++||.+||
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~--~p~~~~~~~~~li~~~L  250 (329)
T PTZ00263        174 TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFD-DTPFRIYEKILAGRLK--FPNWFDGRARDLVKGLL  250 (329)
T ss_pred             eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCC-CCHHHHHHHHhcCCcC--CCCCCCHHHHHHHHHHh
Confidence            5689999999998865 488999999999999999999999976 5677888888877653  34456789999999999


Q ss_pred             h-CcCCCCC-----HHHHhcCCCCcCCCCC
Q 010730          160 E-NVSKRLP-----AKELLLDPFLASDAGE  183 (502)
Q Consensus       160 ~-dP~kRpS-----a~ELL~hPff~~~~~~  183 (502)
                      . ||.+|++     +++++.||||....+.
T Consensus       251 ~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~  280 (329)
T PTZ00263        251 QTDHTKRLGTLKGGVADVKNHPYFHGANWD  280 (329)
T ss_pred             hcCHHHcCCCCCCCHHHHhcCCccCCCCHH
Confidence            8 9999997     7999999999865443


No 22 
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.97  E-value=1.2e-31  Score=270.74  Aligned_cols=175  Identities=29%  Similarity=0.512  Sum_probs=151.3

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccC-CCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-SQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~-~~~~   79 (502)
                      |+.+|+|.+++.+.+.+++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||+++.... ....
T Consensus        74 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~HrDlkp~Nili~~~-~~~kl~Dfg~~~~~~~~~~~~  150 (312)
T cd05585          74 FINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFN--VIYRDLKPENILLDYQ-GHIALCDFGLCKLNMKDDDKT  150 (312)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHeEECCC-CcEEEEECcccccCccCCCcc
Confidence            6789999999998889999999999999999999999998  9999999999999876 7999999999975432 2233


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ...+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+ .+..++++.+..+..  .++...+..+++||.+|
T Consensus       151 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~  227 (312)
T cd05585         151 NTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYD-ENVNEMYRKILQEPL--RFPDGFDRDAKDLLIGL  227 (312)
T ss_pred             ccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCC-CCHHHHHHHHHcCCC--CCCCcCCHHHHHHHHHH
Confidence            45689999999998865 589999999999999999999999976 566777888776654  34455688999999999


Q ss_pred             hh-CcCCCC---CHHHHhcCCCCcCCC
Q 010730          159 LE-NVSKRL---PAKELLLDPFLASDA  181 (502)
Q Consensus       159 L~-dP~kRp---Sa~ELL~hPff~~~~  181 (502)
                      |. +|.+|+   ++.|+|.||||....
T Consensus       228 L~~dp~~R~~~~~~~e~l~hp~~~~~~  254 (312)
T cd05585         228 LSRDPTRRLGYNGAQEIKNHPFFSQLS  254 (312)
T ss_pred             cCCCHHHcCCCCCHHHHHcCCCcCCCC
Confidence            99 999997   589999999998653


No 23 
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=8.9e-32  Score=280.49  Aligned_cols=174  Identities=29%  Similarity=0.448  Sum_probs=149.9

Q ss_pred             CcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCccccc
Q 010730            5 GTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVI   83 (502)
Q Consensus         5 GsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~v   83 (502)
                      -+|.+.++. .+.|++..|+.|+.||++||+|+|.+|  ++||||||||||+.++ ..|||+|||+|+.+......+.++
T Consensus        94 ~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G--fFHRDlKPENiLi~~~-~~iKiaDFGLARev~SkpPYTeYV  170 (538)
T KOG0661|consen   94 CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG--FFHRDLKPENILISGN-DVIKIADFGLAREVRSKPPYTEYV  170 (538)
T ss_pred             hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC--cccccCChhheEeccc-ceeEecccccccccccCCCcchhh
Confidence            478888875 456999999999999999999999999  9999999999999976 589999999999998888888899


Q ss_pred             CCCcccCccccc--cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc-C-------------------CCCC
Q 010730           84 GTPEFMAPELYE--EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS-G-------------------KLPG  141 (502)
Q Consensus        84 GTp~Y~APEvl~--~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~-g-------------------~~p~  141 (502)
                      .|.+|.|||++.  +.|+.++||||+|||++|+++-++.|++....+|||+...- |                   .+|.
T Consensus       171 STRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~  250 (538)
T KOG0661|consen  171 STRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQ  250 (538)
T ss_pred             hcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCc
Confidence            999999999774  56999999999999999999999999998888999876431 1                   1110


Q ss_pred             ----cc---cccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          142 ----AF---HRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       142 ----~~---~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                          .+   -...+.++.++|.+||. ||.+||||.|+|+||||+...
T Consensus       251 ~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~  298 (538)
T KOG0661|consen  251 VKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR  298 (538)
T ss_pred             CCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence                00   11257889999999999 999999999999999998653


No 24 
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97  E-value=7.7e-32  Score=277.03  Aligned_cols=178  Identities=25%  Similarity=0.503  Sum_probs=157.4

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCC--C---CcEEEEecCCceeccC
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGH--L---GQIKIGDLGLAAILRG   75 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~--~---g~vKL~DFGlA~~~~~   75 (502)
                      |+.||+|..|+++.+.+++..++.++.||+.||++||+.+  ||||||||+|||++..  .   ..+||+|||+|+.+..
T Consensus        90 yC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~--IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~  167 (429)
T KOG0595|consen   90 YCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENN--IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQP  167 (429)
T ss_pred             eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCcceEEeccCCCCCCCceEEecccchhhhCCc
Confidence            7899999999999999999999999999999999999999  9999999999999764  1   3589999999999998


Q ss_pred             CCCcccccCCCcccCcccc-ccCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC-CCcccccccHHHHH
Q 010730           76 SQQAHSVIGTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL-PGAFHRIQDAEARR  153 (502)
Q Consensus        76 ~~~~~s~vGTp~Y~APEvl-~~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~-p~~~~~~~s~~l~~  153 (502)
                      +....+.+|+|.|||||++ ..+|+.|+|+||+|+|+|+|++|+.||.. .+..+++..+..+.. ...++...+..+.+
T Consensus       168 ~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a-~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~  246 (429)
T KOG0595|consen  168 GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA-ETPKELLLYIKKGNEIVPVLPAELSNPLRE  246 (429)
T ss_pred             hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc-cCHHHHHHHHhccccccCchhhhccCchhh
Confidence            8888999999999999988 57899999999999999999999999976 677888777776653 23445555667778


Q ss_pred             HHHHhhh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          154 FVGKCLE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                      ++...|. ++..|.+..+-+.|+++....
T Consensus       247 Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  247 LLISLLQRNPKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             hhhHHHhcCccccCchHHhhhhhhcccCc
Confidence            8888887 999999999999999997654


No 25 
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.97  E-value=2e-31  Score=275.21  Aligned_cols=180  Identities=26%  Similarity=0.441  Sum_probs=148.1

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC---
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ---   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~---   77 (502)
                      |+.||+|.+++.+.+.+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++.+....   
T Consensus        82 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--ivHrDlKp~NILi~~~-~~vkL~DFGla~~~~~~~~~~  158 (363)
T cd05628          82 FLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLG--FIHRDIKPDNLLLDSK-GHVKLSDFGLCTGLKKAHRTE  158 (363)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECCC-CCEEEeeccCccccccccccc
Confidence            6789999999999899999999999999999999999998  9999999999999876 799999999987543210   


Q ss_pred             ---------------------------------CcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCC
Q 010730           78 ---------------------------------QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSE  123 (502)
Q Consensus        78 ---------------------------------~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~  123 (502)
                                                       .....+||+.|+|||++. ..++.++|||||||++|+|++|..||.+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~  238 (363)
T cd05628         159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (363)
T ss_pred             ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence                                             013468999999999875 4589999999999999999999999976


Q ss_pred             CCChHHHHHHhhcCCCCCccc--ccccHHHHHHHHHhhhCc---CCCCCHHHHhcCCCCcCCCCCC
Q 010730          124 CSNPAQIYKKVTSGKLPGAFH--RIQDAEARRFVGKCLENV---SKRLPAKELLLDPFLASDAGEP  184 (502)
Q Consensus       124 ~~~~~ql~~kI~~g~~p~~~~--~~~s~~l~~LI~kcL~dP---~kRpSa~ELL~hPff~~~~~~~  184 (502)
                       .+..++++++........++  ...+++++++|.+|+.+|   ..||+++||++||||+...+..
T Consensus       239 -~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~~~~~~~  303 (363)
T cd05628         239 -ETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEGVDWEH  303 (363)
T ss_pred             -CCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCCCCCCCCHHH
Confidence             56677788877643222222  235789999999977644   4568999999999998765543


No 26 
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.97  E-value=2.4e-31  Score=270.13  Aligned_cols=176  Identities=24%  Similarity=0.459  Sum_probs=152.3

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.||+|.+++.+.+.+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++... .....
T Consensus        77 y~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~--ivH~dlkp~NIli~~~-~~~kL~DfG~~~~~~~~~~~~  153 (320)
T cd05590          77 FVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKG--IIYRDLKLDNVLLDHE-GHCKLADFGMCKEGIFNGKTT  153 (320)
T ss_pred             CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECCC-CcEEEeeCCCCeecCcCCCcc
Confidence            6789999999999889999999999999999999999998  9999999999999877 799999999987642 22334


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .+..+++..+..+...  ++...+.+++++|.+|
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~-~~~~~~~~~i~~~~~~--~~~~~~~~~~~li~~~  230 (320)
T cd05590         154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEA-ENEDDLFEAILNDEVV--YPTWLSQDAVDILKAF  230 (320)
T ss_pred             cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCC-CCHHHHHHHHhcCCCC--CCCCCCHHHHHHHHHH
Confidence            45679999999998864 589999999999999999999999976 5677788888766542  3344678999999999


Q ss_pred             hh-CcCCCCCH------HHHhcCCCCcCCCC
Q 010730          159 LE-NVSKRLPA------KELLLDPFLASDAG  182 (502)
Q Consensus       159 L~-dP~kRpSa------~ELL~hPff~~~~~  182 (502)
                      |. ||.+|+++      ++++.||||....+
T Consensus       231 L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~  261 (320)
T cd05590         231 MTKNPTMRLGSLTLGGEEAILRHPFFKELDW  261 (320)
T ss_pred             cccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence            98 99999998      99999999976543


No 27 
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.97  E-value=1.9e-31  Score=274.30  Aligned_cols=175  Identities=25%  Similarity=0.473  Sum_probs=153.0

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.||+|.+++.+.+.+++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||+++.+..  ...
T Consensus       112 y~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~-~~ikL~DFG~a~~~~~--~~~  186 (340)
T PTZ00426        112 FVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLN--IVYRDLKPENLLLDKD-GFIKMTDFGFAKVVDT--RTY  186 (340)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECCC-CCEEEecCCCCeecCC--Ccc
Confidence            6789999999999899999999999999999999999998  9999999999999876 7999999999987643  234


Q ss_pred             cccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhh
Q 010730           81 SVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCL  159 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL  159 (502)
                      +.+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+ .+...+++.+..+..  .++...+..++++|.+||
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~-~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~l  263 (340)
T PTZ00426        187 TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYA-NEPLLIYQKILEGII--YFPKFLDNNCKHLMKKLL  263 (340)
T ss_pred             eecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCC-CCHHHHHHHHhcCCC--CCCCCCCHHHHHHHHHHc
Confidence            5789999999998864 488999999999999999999999976 566777888887764  234456788999999999


Q ss_pred             h-CcCCCC-----CHHHHhcCCCCcCCCCC
Q 010730          160 E-NVSKRL-----PAKELLLDPFLASDAGE  183 (502)
Q Consensus       160 ~-dP~kRp-----Sa~ELL~hPff~~~~~~  183 (502)
                      . +|.+|+     +++++++||||+...+.
T Consensus       264 ~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~  293 (340)
T PTZ00426        264 SHDLTKRYGNLKKGAQNVKEHPWFGNIDWV  293 (340)
T ss_pred             ccCHHHcCCCCCCCHHHHHcCCCcCCCCHH
Confidence            8 999995     89999999999875543


No 28 
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=99.97  E-value=2.5e-31  Score=270.84  Aligned_cols=178  Identities=25%  Similarity=0.409  Sum_probs=149.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC---
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ---   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~---   77 (502)
                      |+.||+|.+++.+.+.+++..++.++.||+.||+|||++|  |+||||||+|||++.+ +.+||+|||++..+....   
T Consensus        82 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g--iiH~Dlkp~NIll~~~-~~~kL~Dfg~~~~~~~~~~~~  158 (350)
T cd05573          82 YMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLG--FIHRDIKPDNILIDAD-GHIKLADFGLCKKMNKAKDRE  158 (350)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCC-CCEEeecCCCCccCcccCccc
Confidence            5789999999998889999999999999999999999988  9999999999999887 799999999997654332   


Q ss_pred             ---------------------------CcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHH
Q 010730           78 ---------------------------QAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQ  129 (502)
Q Consensus        78 ---------------------------~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~q  129 (502)
                                                 .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .+...
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~-~~~~~  237 (350)
T cd05573         159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYS-DTLQE  237 (350)
T ss_pred             ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCC-CCHHH
Confidence                                       2344679999999998864 589999999999999999999999977 44566


Q ss_pred             HHHHhhc--CCCCCcccccccHHHHHHHHHhhhCcCCCCC-HHHHhcCCCCcCCCC
Q 010730          130 IYKKVTS--GKLPGAFHRIQDAEARRFVGKCLENVSKRLP-AKELLLDPFLASDAG  182 (502)
Q Consensus       130 l~~kI~~--g~~p~~~~~~~s~~l~~LI~kcL~dP~kRpS-a~ELL~hPff~~~~~  182 (502)
                      .+.++..  .....+.....++.+++||.+||.+|.+|++ ++++|.||||+...+
T Consensus       238 ~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~dp~~R~~s~~~ll~hp~~~~~~~  293 (350)
T cd05573         238 TYNKIINWKESLRFPPDPPVSPEAIDLICRLLCDPEDRLGSFEEIKSHPFFKGIDW  293 (350)
T ss_pred             HHHHHhccCCcccCCCCCCCCHHHHHHHHHHccChhhcCCCHHHHhcCCCcCCCCH
Confidence            6666665  2222122223588999999999999999999 999999999986544


No 29 
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.97  E-value=3.2e-31  Score=270.35  Aligned_cols=176  Identities=26%  Similarity=0.483  Sum_probs=150.4

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.+|+|..++.+.+.+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++... .....
T Consensus        76 y~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~NIll~~~-~~~kL~DfG~~~~~~~~~~~~  152 (328)
T cd05593          76 YVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGK--IVYRDLKLENLMLDKD-GHIKITDFGLCKEGITDAATM  152 (328)
T ss_pred             CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeEECCC-CcEEEecCcCCccCCCccccc
Confidence            6789999999998889999999999999999999999998  9999999999999876 799999999987532 22333


Q ss_pred             ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ...+||+.|+|||++. ..++.++|||||||++|+|++|..||.. .+..++.+.+..+..  .++...++++++||.+|
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~-~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~  229 (328)
T cd05593         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELILMEDI--KFPRTLSADAKSLLSGL  229 (328)
T ss_pred             ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCC-CCHHHHHHHhccCCc--cCCCCCCHHHHHHHHHH
Confidence            4568999999999886 4589999999999999999999999976 455666666655544  34455688999999999


Q ss_pred             hh-CcCCCC-----CHHHHhcCCCCcCCCC
Q 010730          159 LE-NVSKRL-----PAKELLLDPFLASDAG  182 (502)
Q Consensus       159 L~-dP~kRp-----Sa~ELL~hPff~~~~~  182 (502)
                      |. +|.+|+     ++.|+++||||....+
T Consensus       230 L~~dP~~R~~~~~~~~~~il~h~~~~~~~~  259 (328)
T cd05593         230 LIKDPNKRLGGGPDDAKEIMRHSFFTGVNW  259 (328)
T ss_pred             cCCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence            98 999997     8999999999976443


No 30 
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.97  E-value=3e-31  Score=272.73  Aligned_cols=178  Identities=28%  Similarity=0.474  Sum_probs=148.5

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC---
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ---   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~---   77 (502)
                      |+.||+|.+++.+.+.+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++.+....   
T Consensus        82 ~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~~-~~~kl~Dfg~~~~~~~~~~~~  158 (364)
T cd05599          82 YLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLG--YIHRDIKPDNLLLDAK-GHIKLSDFGLCTGLKKSHRTE  158 (364)
T ss_pred             CCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCC-CCEEEeecccceecccccccc
Confidence            5789999999998889999999999999999999999998  9999999999999887 799999999987643211   


Q ss_pred             ------------------------------------CcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCC
Q 010730           78 ------------------------------------QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYP  120 (502)
Q Consensus        78 ------------------------------------~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~P  120 (502)
                                                          ...+.+||+.|+|||++. ..++.++|||||||++|+|++|..|
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P  238 (364)
T cd05599         159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP  238 (364)
T ss_pred             ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence                                                112357999999999875 4589999999999999999999999


Q ss_pred             CCCCCChHHHHHHhhcCCCCCcc--cccccHHHHHHHHHhhhCcCCCCC---HHHHhcCCCCcCCCC
Q 010730          121 YSECSNPAQIYKKVTSGKLPGAF--HRIQDAEARRFVGKCLENVSKRLP---AKELLLDPFLASDAG  182 (502)
Q Consensus       121 f~~~~~~~ql~~kI~~g~~p~~~--~~~~s~~l~~LI~kcL~dP~kRpS---a~ELL~hPff~~~~~  182 (502)
                      |.. .+..+.+..+........+  ....++.+++||.+||.+|.+|++   +.|+|.||||+...+
T Consensus       239 f~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~~p~~R~~~~~~~~ll~h~~~~~~~~  304 (364)
T cd05599         239 FCS-DNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCCEAERRLGNNGVNEIKSHPFFKGVDW  304 (364)
T ss_pred             CCC-CCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHccCHhhcCCCCCHHHHhcCCCcCCCCH
Confidence            976 4556666666654332222  223578999999999999999998   999999999987544


No 31 
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.97  E-value=4.3e-31  Score=262.79  Aligned_cols=179  Identities=23%  Similarity=0.390  Sum_probs=146.7

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++...  ..+++..+..++.||+.||+|||+.+  |+||||||+|||++.+ +.+||+|||++........
T Consensus        81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nill~~~-~~~kl~Dfg~~~~~~~~~~  157 (285)
T cd05631          81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER--IVYRDLKPENILLDDR-GHIRISDLGLAVQIPEGET  157 (285)
T ss_pred             ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECCC-CCEEEeeCCCcEEcCCCCe
Confidence            57899999888653  46999999999999999999999998  9999999999999876 7899999999987654444


Q ss_pred             cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCC---hHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSN---PAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~---~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      ....+||+.|+|||++. ..|+.++|||||||++|+|++|..||.....   ...+...+.....  .++...+..+.+|
T Consensus       158 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~l  235 (285)
T cd05631         158 VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQE--EYSEKFSEDAKSI  235 (285)
T ss_pred             ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccc--cCCccCCHHHHHH
Confidence            45678999999999886 4589999999999999999999999976432   1233333333222  3344467899999


Q ss_pred             HHHhhh-CcCCCCC-----HHHHhcCCCCcCCCCCC
Q 010730          155 VGKCLE-NVSKRLP-----AKELLLDPFLASDAGEP  184 (502)
Q Consensus       155 I~kcL~-dP~kRpS-----a~ELL~hPff~~~~~~~  184 (502)
                      |.+||. +|.+|++     ++++++||||....+..
T Consensus       236 i~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~  271 (285)
T cd05631         236 CRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKR  271 (285)
T ss_pred             HHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHH
Confidence            999999 9999997     99999999998765443


No 32 
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=2.2e-31  Score=278.85  Aligned_cols=176  Identities=25%  Similarity=0.437  Sum_probs=159.5

Q ss_pred             CCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCccc
Q 010730            3 TSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS   81 (502)
Q Consensus         3 tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s   81 (502)
                      .+|+|++||-++ ..+++..+++|+.||+.|+.|||...  ||||||||+|+.+-...|-|||.|||++..+.+++++.+
T Consensus       100 D~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLH--VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~T  177 (864)
T KOG4717|consen  100 DGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLH--VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTT  177 (864)
T ss_pred             CCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhh--hhcccCCcceeEEeeecCceEeeeccccccCCCcchhhc
Confidence            579999999886 56999999999999999999999988  999999999998877789999999999999999999999


Q ss_pred             ccCCCcccCccccccC-C-CCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhh
Q 010730           82 VIGTPEFMAPELYEED-Y-NELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCL  159 (502)
Q Consensus        82 ~vGTp~Y~APEvl~~~-y-s~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL  159 (502)
                      .||+..|-|||++.+. | .+++||||||||||.|+||++||.+ .|..+..-+|+.+++  ..+...+.++++||..||
T Consensus       178 sCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqe-ANDSETLTmImDCKY--tvPshvS~eCrdLI~sML  254 (864)
T KOG4717|consen  178 SCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQE-ANDSETLTMIMDCKY--TVPSHVSKECRDLIQSML  254 (864)
T ss_pred             ccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccc-ccchhhhhhhhcccc--cCchhhhHHHHHHHHHHH
Confidence            9999999999987653 5 5689999999999999999999988 666777888999988  456667899999999999


Q ss_pred             h-CcCCCCCHHHHhcCCCCcCCCCC
Q 010730          160 E-NVSKRLPAKELLLDPFLASDAGE  183 (502)
Q Consensus       160 ~-dP~kRpSa~ELL~hPff~~~~~~  183 (502)
                      . ||.+|.+.+||..++|++.....
T Consensus       255 vRdPkkRAslEeI~s~~Wlq~~D~~  279 (864)
T KOG4717|consen  255 VRDPKKRASLEEIVSTSWLQAGDRG  279 (864)
T ss_pred             hcCchhhccHHHHhccccccCCCCC
Confidence            9 99999999999999999876543


No 33 
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=2e-31  Score=276.27  Aligned_cols=179  Identities=27%  Similarity=0.496  Sum_probs=150.4

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-   77 (502)
                      ||.+|++.+.++.+  ..++|..|+.+++++|.||.|||.+|  -||||||+.|||++.+ |.|||+|||++..+.... 
T Consensus       105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G--~IHRdvKAgnILi~~d-G~VkLadFgvsa~l~~~G~  181 (516)
T KOG0582|consen  105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG--HIHRDVKAGNILIDSD-GTVKLADFGVSASLFDSGD  181 (516)
T ss_pred             hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC--ceecccccccEEEcCC-CcEEEcCceeeeeecccCc
Confidence            68999999999864  45999999999999999999999999  9999999999999987 899999999987653322 


Q ss_pred             C----cccccCCCcccCccccc---cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC-------CCcc
Q 010730           78 Q----AHSVIGTPEFMAPELYE---EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL-------PGAF  143 (502)
Q Consensus        78 ~----~~s~vGTp~Y~APEvl~---~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~-------p~~~  143 (502)
                      .    ..+++|||+|||||++.   ..|+.|+||||||++..||++|..||.......-+..++.....       +...
T Consensus       182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~  261 (516)
T KOG0582|consen  182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDE  261 (516)
T ss_pred             eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHH
Confidence            1    15679999999999964   35999999999999999999999999987666666766655432       1122


Q ss_pred             cccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCCC
Q 010730          144 HRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAG  182 (502)
Q Consensus       144 ~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~~  182 (502)
                      ....+..++.+|..||. ||.+||||++||+|+||+....
T Consensus       262 ~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~  301 (516)
T KOG0582|consen  262 DKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKS  301 (516)
T ss_pred             hhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccc
Confidence            22346689999999998 9999999999999999986543


No 34 
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.97  E-value=2.5e-31  Score=269.94  Aligned_cols=175  Identities=27%  Similarity=0.499  Sum_probs=149.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCC
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHG-HDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs-~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~   78 (502)
                      |+.+|+|.+++.+.+.+++..++.++.||+.||+|||+ .+  |+||||||+|||++.+ +.+||+|||+++... ....
T Consensus        76 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~--ivHrDikp~NIll~~~-~~~kL~Dfg~~~~~~~~~~~  152 (325)
T cd05594          76 YANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGAT  152 (325)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCC--EEecCCCCCeEEECCC-CCEEEecCCCCeecCCCCcc
Confidence            67899999999988899999999999999999999997 67  9999999999999876 799999999987543 2233


Q ss_pred             cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGK  157 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~k  157 (502)
                      ....+||+.|+|||++. ..++.++|||||||++|+|++|..||.+ .+..++++.+..+..  .++...++++.+||.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~-~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~  229 (325)
T cd05594         153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELILMEEI--RFPRTLSPEAKSLLSG  229 (325)
T ss_pred             cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCC-CCHHHHHHHHhcCCC--CCCCCCCHHHHHHHHH
Confidence            44567999999999885 4589999999999999999999999976 555667777665544  3445568899999999


Q ss_pred             hhh-CcCCCC-----CHHHHhcCCCCcCCC
Q 010730          158 CLE-NVSKRL-----PAKELLLDPFLASDA  181 (502)
Q Consensus       158 cL~-dP~kRp-----Sa~ELL~hPff~~~~  181 (502)
                      ||. ||.+|+     ++.++|+||||....
T Consensus       230 ~L~~dP~~R~~~~~~~~~~il~h~~~~~~~  259 (325)
T cd05594         230 LLKKDPKQRLGGGPDDAKEIMQHKFFAGIV  259 (325)
T ss_pred             HhhcCHHHhCCCCCCCHHHHhcCCCcCCCC
Confidence            998 999997     899999999997643


No 35 
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.97  E-value=4.3e-31  Score=268.01  Aligned_cols=176  Identities=24%  Similarity=0.447  Sum_probs=152.3

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.+|+|.+++.+.+.+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++... .....
T Consensus        82 ~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~-~~~kL~DfG~~~~~~~~~~~~  158 (323)
T cd05616          82 YVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDSE-GHIKIADFGMCKENMWDGVTT  158 (323)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--EEecCCCHHHeEECCC-CcEEEccCCCceecCCCCCcc
Confidence            5789999999999889999999999999999999999998  9999999999999887 799999999997643 22334


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ...+||+.|+|||++.+ .++.++|||||||++|+|+||..||.+ .+...+++.+.....  .++...+.+++++|.+|
T Consensus       159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~-~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~~  235 (323)
T cd05616         159 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG-EDEDELFQSIMEHNV--AYPKSMSKEAVAICKGL  235 (323)
T ss_pred             ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCC-CCHHHHHHHHHhCCC--CCCCcCCHHHHHHHHHH
Confidence            45789999999998864 589999999999999999999999976 566777888776654  34455688999999999


Q ss_pred             hh-CcCCCCC-----HHHHhcCCCCcCCCC
Q 010730          159 LE-NVSKRLP-----AKELLLDPFLASDAG  182 (502)
Q Consensus       159 L~-dP~kRpS-----a~ELL~hPff~~~~~  182 (502)
                      |. +|.+|++     ..+++.||||+...+
T Consensus       236 l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~  265 (323)
T cd05616         236 MTKHPGKRLGCGPEGERDIKEHAFFRYIDW  265 (323)
T ss_pred             cccCHHhcCCCCCCCHHHHhcCCCcCCCCH
Confidence            98 9999998     489999999986554


No 36 
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=99.97  E-value=4.9e-31  Score=268.33  Aligned_cols=176  Identities=25%  Similarity=0.402  Sum_probs=148.3

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.||+|.+++.+.+.+++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||++.....  ...
T Consensus        82 ~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~-~~~kL~Dfg~a~~~~~--~~~  156 (333)
T cd05600          82 YVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELG--YIHRDLKPENFLIDAS-GHIKLTDFGLSKGIVT--YAN  156 (333)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCC-CCEEEEeCcCCccccc--ccC
Confidence            6789999999999889999999999999999999999998  9999999999999876 7999999999976543  345


Q ss_pred             cccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC----CCcc--cccccHHHHH
Q 010730           81 SVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL----PGAF--HRIQDAEARR  153 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~----p~~~--~~~~s~~l~~  153 (502)
                      ..+||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .+..+.+..+.....    |...  ....+.++.+
T Consensus       157 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~  235 (333)
T cd05600         157 SVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSG-STPNETWENLKYWKETLQRPVYDDPRFNLSDEAWD  235 (333)
T ss_pred             CcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCC-CCHHHHHHHHHhccccccCCCCCccccccCHHHHH
Confidence            5789999999998764 589999999999999999999999976 566666666554321    1111  1134789999


Q ss_pred             HHHHhhh-CcCCCCCHHHHhcCCCCcCCCC
Q 010730          154 FVGKCLE-NVSKRLPAKELLLDPFLASDAG  182 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~hPff~~~~~  182 (502)
                      ||.+||. +|.+|+++.+++.||||....+
T Consensus       236 li~~~l~~~~~rr~s~~~ll~h~~~~~~~~  265 (333)
T cd05600         236 LITKLINDPSRRFGSLEDIKNHPFFKEVDW  265 (333)
T ss_pred             HHHHHhhChhhhcCCHHHHHhCcccCCCCH
Confidence            9999998 8899999999999999986543


No 37 
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.97  E-value=4.9e-31  Score=267.56  Aligned_cols=176  Identities=27%  Similarity=0.429  Sum_probs=151.4

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.||+|.+++.+.+.+++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||+++... .....
T Consensus        77 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~g--ivH~dikp~NIll~~~-~~~kl~Dfg~~~~~~~~~~~~  153 (323)
T cd05575          77 YVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLN--IIYRDLKPENILLDSQ-GHVVLTDFGLCKEGIEHSKTT  153 (323)
T ss_pred             CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECCC-CcEEEeccCCCcccccCCCcc
Confidence            6789999999999889999999999999999999999998  9999999999999876 799999999987542 22233


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ...+||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .+..++++.+..+...  +....+..+.++|.+|
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~-~~~~~~~~~i~~~~~~--~~~~~~~~~~~li~~~  230 (323)
T cd05575         154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYS-RDTAEMYDNILNKPLR--LKPNISVSARHLLEGL  230 (323)
T ss_pred             ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCC-CCHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHH
Confidence            45679999999998764 588999999999999999999999976 5667788888766542  3344588999999999


Q ss_pred             hh-CcCCCCCH----HHHhcCCCCcCCCC
Q 010730          159 LE-NVSKRLPA----KELLLDPFLASDAG  182 (502)
Q Consensus       159 L~-dP~kRpSa----~ELL~hPff~~~~~  182 (502)
                      |. +|.+|+++    .+++.||||....+
T Consensus       231 l~~~p~~R~~~~~~~~~il~~~~~~~~~~  259 (323)
T cd05575         231 LQKDRTKRLGAKDDFLEIKNHVFFSSINW  259 (323)
T ss_pred             hhcCHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence            99 99999997    69999999986544


No 38 
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.97  E-value=6.4e-31  Score=266.52  Aligned_cols=176  Identities=24%  Similarity=0.455  Sum_probs=151.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.+|+|..++.+.+.+++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||++.... .....
T Consensus        77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~Nill~~~-~~~kL~Dfg~~~~~~~~~~~~  153 (321)
T cd05591          77 YVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHG--VIYRDLKLDNILLDAE-GHCKLADFGMCKEGILNGVTT  153 (321)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCC-CCEEEeecccceecccCCccc
Confidence            5789999999999889999999999999999999999998  9999999999999877 799999999987643 22233


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ...+||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .+..++++.+..+...  ++...+.++.++|.+|
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~-~~~~~~~~~i~~~~~~--~p~~~~~~~~~ll~~~  230 (321)
T cd05591         154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEA-DNEDDLFESILHDDVL--YPVWLSKEAVSILKAF  230 (321)
T ss_pred             cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCC-CCHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHH
Confidence            45679999999998864 589999999999999999999999976 5677778887766542  3344578999999999


Q ss_pred             hh-CcCCCC-------CHHHHhcCCCCcCCCC
Q 010730          159 LE-NVSKRL-------PAKELLLDPFLASDAG  182 (502)
Q Consensus       159 L~-dP~kRp-------Sa~ELL~hPff~~~~~  182 (502)
                      |. +|.+|+       ++.+++.||||....+
T Consensus       231 L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~  262 (321)
T cd05591         231 MTKNPNKRLGCVASQGGEDAIKQHPFFKEIDW  262 (321)
T ss_pred             hccCHHHcCCCCCCCCCHHHHhcCCccCCCCH
Confidence            98 999999       8999999999976543


No 39 
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.97  E-value=6.3e-31  Score=274.20  Aligned_cols=171  Identities=32%  Similarity=0.510  Sum_probs=147.1

Q ss_pred             CCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-C
Q 010730            1 MFTSGTLREYRKK--YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-Q   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k--~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~   77 (502)
                      |+.+|+|.+++.+  .+.++...+..|+.||+.|+.|||++++ ||||||||+|||++.+.-.+||+|||+++..... .
T Consensus       121 y~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~-iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~  199 (362)
T KOG0192|consen  121 YMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP-IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKT  199 (362)
T ss_pred             eCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC-eeecccChhhEEEcCCCCEEEECCCccceeeccccc
Confidence            7899999999988  6789999999999999999999999987 9999999999999987228999999999877654 3


Q ss_pred             CcccccCCCcccCccccccC---CCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           78 QAHSVIGTPEFMAPELYEED---YNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        78 ~~~s~vGTp~Y~APEvl~~~---ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      ......||+.|||||++.+.   |+.++||||||++||||+||..||.+... .++...+..+.....++....+.+..+
T Consensus       200 ~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~~~~~Rp~~p~~~~~~l~~l  278 (362)
T KOG0192|consen  200 SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVVVGGLRPPIPKECPPHLSSL  278 (362)
T ss_pred             cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhcCCCCCCCccCCHHHHHH
Confidence            44557899999999999853   99999999999999999999999998766 555444443333335555578999999


Q ss_pred             HHHhhh-CcCCCCCHHHHhc
Q 010730          155 VGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~  173 (502)
                      |.+||. +|.+||+..+++.
T Consensus       279 ~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  279 MERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             HHHhCCCCCCcCCCHHHHHH
Confidence            999998 9999999998875


No 40 
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.97  E-value=7.5e-31  Score=266.31  Aligned_cols=176  Identities=24%  Similarity=0.462  Sum_probs=151.6

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.||+|.+++.+.+.+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||++.... .....
T Consensus        82 ~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~-~~~kL~Dfg~~~~~~~~~~~~  158 (324)
T cd05587          82 YVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDAE-GHIKIADFGMCKENIFGGKTT  158 (324)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEEcCC-CCEEEeecCcceecCCCCCce
Confidence            5789999999999889999999999999999999999998  9999999999999876 799999999987532 22333


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ...+||+.|+|||++.+ .++.++|||||||++|+|+||..||.+ .+..+++..+.....  .++...+.++.++|.+|
T Consensus       159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~-~~~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~  235 (324)
T cd05587         159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG-EDEDELFQSIMEHNV--SYPKSLSKEAVSICKGL  235 (324)
T ss_pred             eeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHH
Confidence            45689999999998865 489999999999999999999999976 566777887776654  34455688999999999


Q ss_pred             hh-CcCCCCCH-----HHHhcCCCCcCCCC
Q 010730          159 LE-NVSKRLPA-----KELLLDPFLASDAG  182 (502)
Q Consensus       159 L~-dP~kRpSa-----~ELL~hPff~~~~~  182 (502)
                      |. +|.+|+++     ++++.||||+...+
T Consensus       236 l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~  265 (324)
T cd05587         236 LTKHPAKRLGCGPTGERDIREHAFFRRIDW  265 (324)
T ss_pred             hhcCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence            98 99999976     89999999986544


No 41 
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.97  E-value=5.6e-31  Score=267.77  Aligned_cols=176  Identities=27%  Similarity=0.483  Sum_probs=150.3

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.+|+|.+++.+.+.+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++... .....
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~-~~~kL~Dfg~~~~~~~~~~~~  152 (323)
T cd05595          76 YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATM  152 (323)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEEcCC-CCEEecccHHhccccCCCCcc
Confidence            6789999999998889999999999999999999999998  9999999999999876 799999999987532 22333


Q ss_pred             ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ....||+.|+|||++. ..++.++|||||||++|+|++|..||.. .+...+++.+.....  .++...+++++++|.+|
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~-~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~  229 (323)
T cd05595         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELILMEEI--RFPRTLSPEAKSLLAGL  229 (323)
T ss_pred             ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCC-CCHHHHHHHHhcCCC--CCCCCCCHHHHHHHHHH
Confidence            4568999999999885 4589999999999999999999999976 455666666665543  24455688999999999


Q ss_pred             hh-CcCCCC-----CHHHHhcCCCCcCCCC
Q 010730          159 LE-NVSKRL-----PAKELLLDPFLASDAG  182 (502)
Q Consensus       159 L~-dP~kRp-----Sa~ELL~hPff~~~~~  182 (502)
                      |. +|.+|+     ++.++++||||....+
T Consensus       230 L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~  259 (323)
T cd05595         230 LKKDPKQRLGGGPSDAKEVMEHRFFLSINW  259 (323)
T ss_pred             ccCCHHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence            98 999998     8999999999986543


No 42 
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.97  E-value=6.8e-31  Score=266.36  Aligned_cols=175  Identities=27%  Similarity=0.528  Sum_probs=149.6

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.||+|.+++.+.+++++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++... .....
T Consensus        77 ~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~  153 (316)
T cd05620          77 FLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKG--IIYRDLKLDNVMLDRD-GHIKIADFGMCKENVFGDNRA  153 (316)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCC-CCEEeCccCCCeecccCCCce
Confidence            6789999999998889999999999999999999999998  9999999999999877 799999999987532 22234


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ...+||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .+..++++.+..+..  .++...+.+++++|.+|
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~  230 (316)
T cd05620         154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHG-DDEDELFESIRVDTP--HYPRWITKESKDILEKL  230 (316)
T ss_pred             eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCC-CCHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHH
Confidence            45789999999998864 589999999999999999999999976 566777777765543  33445678999999999


Q ss_pred             hh-CcCCCCCH-HHHhcCCCCcCCC
Q 010730          159 LE-NVSKRLPA-KELLLDPFLASDA  181 (502)
Q Consensus       159 L~-dP~kRpSa-~ELL~hPff~~~~  181 (502)
                      |. ||.+|+++ ++++.||||+...
T Consensus       231 l~~dP~~R~~~~~~~~~h~~f~~~~  255 (316)
T cd05620         231 FERDPTRRLGVVGNIRGHPFFKTIN  255 (316)
T ss_pred             ccCCHHHcCCChHHHHcCCCcCCCC
Confidence            98 99999997 5899999997654


No 43 
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97  E-value=1.9e-31  Score=271.12  Aligned_cols=176  Identities=30%  Similarity=0.477  Sum_probs=151.0

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.+|+|.+++.+.+.+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||++.... .....
T Consensus        77 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~--ivHrDlkp~Nili~~~-~~~kl~Dfg~a~~~~~~~~~~  153 (330)
T cd05586          77 YMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYD--IVYRDLKPENILLDAT-GHIALCDFGLSKANLTDNKTT  153 (330)
T ss_pred             CCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCC-CCEEEecCCcCcCCCCCCCCc
Confidence            5789999999999899999999999999999999999998  9999999999999876 799999999987532 22334


Q ss_pred             ccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHH
Q 010730           80 HSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGK  157 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~k  157 (502)
                      ...+||+.|+|||++.+  .++.++|||||||++|+|++|..||.. .+..++++.+..+..... ....+..+++||.+
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~-~~~~~~~~~i~~~~~~~~-~~~~~~~~~~li~~  231 (330)
T cd05586         154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA-EDTQQMYRNIAFGKVRFP-KNVLSDEGRQFVKG  231 (330)
T ss_pred             cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCC-CCHHHHHHHHHcCCCCCC-CccCCHHHHHHHHH
Confidence            56789999999998754  378999999999999999999999976 567778888877655322 22457899999999


Q ss_pred             hhh-CcCCCC----CHHHHhcCCCCcCCC
Q 010730          158 CLE-NVSKRL----PAKELLLDPFLASDA  181 (502)
Q Consensus       158 cL~-dP~kRp----Sa~ELL~hPff~~~~  181 (502)
                      ||. +|.+||    ++.+++.||||....
T Consensus       232 ~L~~~P~~R~~~~~~~~~ll~h~~~~~~~  260 (330)
T cd05586         232 LLNRNPQHRLGAHRDAVELKEHPFFADID  260 (330)
T ss_pred             HcCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence            998 999998    699999999997644


No 44 
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97  E-value=6e-31  Score=267.24  Aligned_cols=177  Identities=24%  Similarity=0.413  Sum_probs=147.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC--CC
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS--QQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~--~~   78 (502)
                      |+.+|+|.+++.+.+.+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++.....  ..
T Consensus        86 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nili~~~-~~~kl~DfG~~~~~~~~~~~~  162 (332)
T cd05614          86 YVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLG--IVYRDIKLENILLDSE-GHVVLTDFGLSKEFLSEEKER  162 (332)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHeEECCC-CCEEEeeCcCCccccccCCCc
Confidence            6789999999998889999999999999999999999998  9999999999999877 79999999999765322  22


Q ss_pred             cccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCC---CChHHHHHHhhcCCCCCcccccccHHHHH
Q 010730           79 AHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSEC---SNPAQIYKKVTSGKLPGAFHRIQDAEARR  153 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~---~~~~ql~~kI~~g~~p~~~~~~~s~~l~~  153 (502)
                      ....+||+.|+|||++.+  .++.++|||||||++|+|+||..||...   .....+...+.....  .++...+..+++
T Consensus       163 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  240 (332)
T cd05614         163 TYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP--PFPSFIGPEAQD  240 (332)
T ss_pred             cccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC--CCCCCCCHHHHH
Confidence            345689999999998864  3788999999999999999999999642   233455555554332  344556889999


Q ss_pred             HHHHhhh-CcCCCC-----CHHHHhcCCCCcCCCC
Q 010730          154 FVGKCLE-NVSKRL-----PAKELLLDPFLASDAG  182 (502)
Q Consensus       154 LI~kcL~-dP~kRp-----Sa~ELL~hPff~~~~~  182 (502)
                      +|.+||. +|.+|+     +++++++||||+...+
T Consensus       241 li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~  275 (332)
T cd05614         241 LLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDW  275 (332)
T ss_pred             HHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence            9999998 999999     7899999999986543


No 45 
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.97  E-value=7.7e-31  Score=266.23  Aligned_cols=179  Identities=23%  Similarity=0.408  Sum_probs=148.9

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC-
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~-   78 (502)
                      |+.+|+|.+++.+. +.+++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||++..+..... 
T Consensus        82 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--i~H~Dlkp~NIll~~~-~~~kL~Dfg~a~~~~~~~~~  158 (330)
T cd05601          82 YQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG--YVHRDIKPENVLIDRT-GHIKLADFGSAARLTANKMV  158 (330)
T ss_pred             CCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEcccCchHheEECCC-CCEEeccCCCCeECCCCCce
Confidence            57899999999886 68999999999999999999999998  9999999999999876 7999999999987654332 


Q ss_pred             -cccccCCCcccCccccc-------cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcc--ccccc
Q 010730           79 -AHSVIGTPEFMAPELYE-------EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAF--HRIQD  148 (502)
Q Consensus        79 -~~s~vGTp~Y~APEvl~-------~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~--~~~~s  148 (502)
                       .....||+.|+|||++.       ..++.++|||||||++|+|++|..||.. .+....+.++........+  ....+
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~  237 (330)
T cd05601         159 NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHE-GTSAKTYNNIMNFQRFLKFPEDPKVS  237 (330)
T ss_pred             eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCC-CCHHHHHHHHHcCCCccCCCCCCCCC
Confidence             23357999999999874       3478899999999999999999999976 4555666666554322122  22357


Q ss_pred             HHHHHHHHHhhhCcCCCCCHHHHhcCCCCcCCCCC
Q 010730          149 AEARRFVGKCLENVSKRLPAKELLLDPFLASDAGE  183 (502)
Q Consensus       149 ~~l~~LI~kcL~dP~kRpSa~ELL~hPff~~~~~~  183 (502)
                      ..+++||.+||.+|.+|+++.+++.||||+...+.
T Consensus       238 ~~~~~li~~ll~~p~~R~t~~~l~~h~~~~~~~~~  272 (330)
T cd05601         238 SDFLDLIQSLLCGQKERLGYEGLCCHPFFSKIDWN  272 (330)
T ss_pred             HHHHHHHHHHccChhhCCCHHHHhCCCCcCCCCHH
Confidence            88999999999999999999999999999865443


No 46 
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.97  E-value=1.1e-30  Score=264.87  Aligned_cols=176  Identities=30%  Similarity=0.532  Sum_probs=150.4

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccC-CCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-SQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~-~~~~   79 (502)
                      |+.||+|.+++...+.+++..++.|+.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||+++.... ....
T Consensus        77 ~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dlkp~Nill~~~-~~~kL~Dfg~a~~~~~~~~~~  153 (316)
T cd05592          77 YLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKG--IIYRDLKLDNVLLDKD-GHIKIADFGMCKENMNGEGKA  153 (316)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHeEECCC-CCEEEccCcCCeECCCCCCcc
Confidence            6789999999998889999999999999999999999998  9999999999999876 7999999999976432 2333


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ...+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+ .+..+++..+.....  .++...+.+++++|.+|
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~-~~~~~~~~~i~~~~~--~~~~~~~~~~~~ll~~~  230 (316)
T cd05592         154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHG-EDEDELFDSILNDRP--HFPRWISKEAKDCLSKL  230 (316)
T ss_pred             ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHH
Confidence            45689999999998864 589999999999999999999999976 566777777765433  34455688999999999


Q ss_pred             hh-CcCCCCCH-HHHhcCCCCcCCCC
Q 010730          159 LE-NVSKRLPA-KELLLDPFLASDAG  182 (502)
Q Consensus       159 L~-dP~kRpSa-~ELL~hPff~~~~~  182 (502)
                      |. +|.+|+++ .+++.||||....+
T Consensus       231 l~~~P~~R~~~~~~l~~h~~~~~~~~  256 (316)
T cd05592         231 FERDPTKRLGVDGDIRQHPFFRGIDW  256 (316)
T ss_pred             ccCCHHHcCCChHHHHcCcccCCCCH
Confidence            98 99999986 58999999986543


No 47 
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.97  E-value=1.3e-30  Score=264.87  Aligned_cols=176  Identities=29%  Similarity=0.413  Sum_probs=150.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.||+|.+++.+.+.+.+..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++... .....
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~  157 (323)
T cd05584          81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQG--IIYRDLKPENILLDAQ-GHVKLTDFGLCKESIHEGTVT  157 (323)
T ss_pred             CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCC-CCEEEeeCcCCeecccCCCcc
Confidence            5789999999999899999999999999999999999998  9999999999999876 799999999987543 22334


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .+..+.+..+..+..  .++...++.+++||.+|
T Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~  234 (323)
T cd05584         158 HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTA-ENRKKTIDKILKGKL--NLPPYLTPEARDLLKKL  234 (323)
T ss_pred             cccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCC-CCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHH
Confidence            45679999999998864 488899999999999999999999976 555666777766654  34445678999999999


Q ss_pred             hh-CcCCCC-----CHHHHhcCCCCcCCCC
Q 010730          159 LE-NVSKRL-----PAKELLLDPFLASDAG  182 (502)
Q Consensus       159 L~-dP~kRp-----Sa~ELL~hPff~~~~~  182 (502)
                      |. +|.+|+     ++.+++.||||....+
T Consensus       235 l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~  264 (323)
T cd05584         235 LKRNPSSRLGAGPGDAAEVQSHPFFRHVNW  264 (323)
T ss_pred             cccCHhHcCCCCCCCHHHHhcCCCcCCCCH
Confidence            98 999999     8999999999976543


No 48 
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=99.97  E-value=8.3e-31  Score=271.67  Aligned_cols=178  Identities=26%  Similarity=0.445  Sum_probs=144.8

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC---
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ---   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~---   77 (502)
                      |+.||+|.+++.+.+.+++..++.|+.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++.+....   
T Consensus        82 ~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~g--ivHrDlkp~NIll~~~-~~~kl~DfGla~~~~~~~~~~  158 (377)
T cd05629          82 FLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLG--FIHRDIKPDNILIDRG-GHIKLSDFGLSTGFHKQHDSA  158 (377)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECCC-CCEEEeecccccccccccccc
Confidence            5789999999999899999999999999999999999998  9999999999999876 799999999986321100   


Q ss_pred             ---------------------------------------------CcccccCCCcccCcccccc-CCCCcccchhHHHHH
Q 010730           78 ---------------------------------------------QAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCV  111 (502)
Q Consensus        78 ---------------------------------------------~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviL  111 (502)
                                                                   .....+||+.|+|||++.+ .|+.++|||||||++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil  238 (377)
T cd05629         159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM  238 (377)
T ss_pred             cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence                                                         0013579999999998754 589999999999999


Q ss_pred             HHHhhccCCCCCCCChHHHHHHhhcCCCCCccc--ccccHHHHHHHHHhhhCcCC---CCCHHHHhcCCCCcCCCC
Q 010730          112 LEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFH--RIQDAEARRFVGKCLENVSK---RLPAKELLLDPFLASDAG  182 (502)
Q Consensus       112 yeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~--~~~s~~l~~LI~kcL~dP~k---RpSa~ELL~hPff~~~~~  182 (502)
                      |+|++|.+||.. .+..+.+.++........++  ...+.++++||.+||.+|.+   |+++.|+|.||||+...+
T Consensus       239 ~elltG~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~~~~~r~~r~~~~~~l~hp~~~~~~~  313 (377)
T cd05629         239 FECLIGWPPFCS-ENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLITNAENRLGRGGAHEIKSHPFFRGVDW  313 (377)
T ss_pred             hhhhcCCCCCCC-CCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhcCHhhcCCCCCHHHHhcCCCcCCCCH
Confidence            999999999976 45566677666533222222  23578999999999986665   469999999999986543


No 49 
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97  E-value=5e-31  Score=271.65  Aligned_cols=180  Identities=26%  Similarity=0.470  Sum_probs=148.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC---
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ---   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~---   77 (502)
                      |+.||+|.+++.+.+.+++..++.|+.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++.+....   
T Consensus        82 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~g--ivHrDLkp~NIli~~~-~~vkL~DfG~~~~~~~~~~~~  158 (360)
T cd05627          82 FLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLG--FIHRDIKPDNLLLDAK-GHVKLSDFGLCTGLKKAHRTE  158 (360)
T ss_pred             CCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECCC-CCEEEeeccCCcccccccccc
Confidence            6789999999999889999999999999999999999998  9999999999999876 799999999987542110   


Q ss_pred             ---------------------------------CcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCC
Q 010730           78 ---------------------------------QAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSE  123 (502)
Q Consensus        78 ---------------------------------~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~  123 (502)
                                                       ...+.+||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~  238 (360)
T cd05627         159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (360)
T ss_pred             cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence                                             0124679999999998764 589999999999999999999999976


Q ss_pred             CCChHHHHHHhhcCCCCCccc--ccccHHHHHHHHHhhhCcCCCC---CHHHHhcCCCCcCCCCCC
Q 010730          124 CSNPAQIYKKVTSGKLPGAFH--RIQDAEARRFVGKCLENVSKRL---PAKELLLDPFLASDAGEP  184 (502)
Q Consensus       124 ~~~~~ql~~kI~~g~~p~~~~--~~~s~~l~~LI~kcL~dP~kRp---Sa~ELL~hPff~~~~~~~  184 (502)
                       .+....+.++........++  ...+.+++++|.+|+.+|.+|+   ++.|++.||||+...+..
T Consensus       239 -~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~p~~R~~~~~~~ei~~hp~f~~~~~~~  303 (360)
T cd05627         239 -ETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCTDSENRIGSNGVEEIKSHPFFEGVDWGH  303 (360)
T ss_pred             -CCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhccChhhcCCCCCHHHHhcCCCCCCCCHHH
Confidence             56677777776543221122  2357899999999888999988   489999999998765544


No 50 
>PTZ00284 protein kinase; Provisional
Probab=99.97  E-value=1.1e-30  Score=279.34  Aligned_cols=178  Identities=22%  Similarity=0.314  Sum_probs=138.5

Q ss_pred             CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeEecCCCCCcEEEeCCC---------------CcEEEEe
Q 010730            3 TSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHG-HDPPVIHRDLKCDNIFVNGHL---------------GQIKIGD   66 (502)
Q Consensus         3 tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs-~g~~IIHRDLKPeNILl~~~~---------------g~vKL~D   66 (502)
                      .||+|.+++.+.+.+++..++.++.||+.||+|||+ .+  ||||||||+|||++...               ..+||+|
T Consensus       214 ~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~g--IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~D  291 (467)
T PTZ00284        214 YGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELH--LMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICD  291 (467)
T ss_pred             cCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHEEEecCCcccccccccccCCCCceEEECC
Confidence            488999999998899999999999999999999997 47  99999999999997642               1499999


Q ss_pred             cCCceeccCCCCcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhh-cCCCCCcc-
Q 010730           67 LGLAAILRGSQQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVT-SGKLPGAF-  143 (502)
Q Consensus        67 FGlA~~~~~~~~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~-~g~~p~~~-  143 (502)
                      ||++....  ......+||+.|+|||++.+ .|+.++|||||||++|||++|++||.+..+...+..... .+.+|..+ 
T Consensus       292 fG~~~~~~--~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~  369 (467)
T PTZ00284        292 LGGCCDER--HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWA  369 (467)
T ss_pred             CCccccCc--cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHH
Confidence            99885432  22345789999999998764 599999999999999999999999976443332211110 01111000 


Q ss_pred             -------------------------------------cccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCCCCC
Q 010730          144 -------------------------------------HRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGEP  184 (502)
Q Consensus       144 -------------------------------------~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~~~~  184 (502)
                                                           ....++.+.+||.+||. ||.+||||+|+|.||||.......
T Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~~  448 (467)
T PTZ00284        370 GRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYPEC  448 (467)
T ss_pred             hhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCCcc
Confidence                                                 01124567899999999 999999999999999998654433


No 51 
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=6.5e-31  Score=294.46  Aligned_cols=190  Identities=24%  Similarity=0.452  Sum_probs=164.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC--
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ--   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~--   78 (502)
                      ||.||+|..++.++.+++++.+++|+..|+.||+-||+.|  .|||||||+|||++.. |+|||+|||.+-.+.....  
T Consensus       156 Y~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mg--yVHRDiKPDNvLld~~-GHikLADFGsClkm~~dG~V~  232 (1317)
T KOG0612|consen  156 YMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMG--YVHRDIKPDNVLLDKS-GHIKLADFGSCLKMDADGTVR  232 (1317)
T ss_pred             cccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhcc--ceeccCCcceeEeccc-CcEeeccchhHHhcCCCCcEE
Confidence            8999999999999999999999999999999999999999  9999999999999987 9999999999977764433  


Q ss_pred             cccccCCCcccCccccc------cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCccc--ccccHH
Q 010730           79 AHSVIGTPEFMAPELYE------EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFH--RIQDAE  150 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~------~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~--~~~s~~  150 (502)
                      ....||||.|++||++.      +.|+..+|+||+||++|||+.|..||+. ....+.|.+|+..+-...||  ...+.+
T Consensus       233 s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa-dslveTY~KIm~hk~~l~FP~~~~VSee  311 (1317)
T KOG0612|consen  233 SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA-DSLVETYGKIMNHKESLSFPDETDVSEE  311 (1317)
T ss_pred             eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH-HHHHHHHHHHhchhhhcCCCcccccCHH
Confidence            34578999999999883      4599999999999999999999999987 67788899999875333333  347899


Q ss_pred             HHHHHHHhhhCcCCCCC---HHHHhcCCCCcCCCCCCC---CCCCCCCcc
Q 010730          151 ARRFVGKCLENVSKRLP---AKELLLDPFLASDAGEPL---LIPQVPSFQ  194 (502)
Q Consensus       151 l~~LI~kcL~dP~kRpS---a~ELL~hPff~~~~~~~l---~~p~~p~~~  194 (502)
                      +++||.++|.+|..|+.   +.++..||||.+..|..+   .+|.+|.+.
T Consensus       312 akdLI~~ll~~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~vPevs  361 (1317)
T KOG0612|consen  312 AKDLIEALLCDREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVVPEVS  361 (1317)
T ss_pred             HHHHHHHHhcChhhhcccccHHHHHhCccccCCChhhhhhcCCCCCCcCC
Confidence            99999999999999998   999999999999988543   345555544


No 52 
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.97  E-value=1.3e-30  Score=265.64  Aligned_cols=177  Identities=22%  Similarity=0.437  Sum_probs=147.8

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceec-cCCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAIL-RGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~-~~~~~~   79 (502)
                      |+.||+|.+++.+.+++++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||+++.. ......
T Consensus        77 ~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nili~~~-~~~kL~Dfg~~~~~~~~~~~~  153 (329)
T cd05588          77 FVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERG--IIYRDLKLDNVLLDAE-GHIKLTDYGMCKEGIRPGDTT  153 (329)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCC-CCEEECcCccccccccCCCcc
Confidence            6789999999998889999999999999999999999998  9999999999999876 79999999998753 223334


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCC--------CChHHHHHHhhcCCCCCcccccccHH
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSEC--------SNPAQIYKKVTSGKLPGAFHRIQDAE  150 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~--------~~~~ql~~kI~~g~~p~~~~~~~s~~  150 (502)
                      ...+||+.|+|||++.+ .++.++|||||||++|+|++|..||...        .....+++.+.....  .++...+..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~  231 (329)
T cd05588         154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI--RIPRSLSVK  231 (329)
T ss_pred             ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC--CCCCCCCHH
Confidence            55789999999998864 5889999999999999999999999531        122345566655543  234456789


Q ss_pred             HHHHHHHhhh-CcCCCCC------HHHHhcCCCCcCCCC
Q 010730          151 ARRFVGKCLE-NVSKRLP------AKELLLDPFLASDAG  182 (502)
Q Consensus       151 l~~LI~kcL~-dP~kRpS------a~ELL~hPff~~~~~  182 (502)
                      ++++|.+||. +|.+|++      +.+++.||||....+
T Consensus       232 ~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~  270 (329)
T cd05588         232 ASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDW  270 (329)
T ss_pred             HHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence            9999999998 9999987      789999999976443


No 53 
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97  E-value=1.7e-30  Score=257.36  Aligned_cols=170  Identities=34%  Similarity=0.499  Sum_probs=138.6

Q ss_pred             CCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCccc
Q 010730            4 SGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS   81 (502)
Q Consensus         4 gGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s   81 (502)
                      +|+|.+++.+.  ..+++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||++...........
T Consensus        92 ~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--iiH~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~  168 (290)
T cd07862          92 DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTS  168 (290)
T ss_pred             CCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEcCC-CCEEEccccceEeccCCccccc
Confidence            57899999764  45899999999999999999999998  9999999999999876 7999999999987655444556


Q ss_pred             ccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcC-CCC--Cc---------------
Q 010730           82 VIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSG-KLP--GA---------------  142 (502)
Q Consensus        82 ~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g-~~p--~~---------------  142 (502)
                      ..||+.|+|||++. ..++.++|||||||++|+|++|.+||.+..... .+.++... ..+  ..               
T Consensus       169 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (290)
T cd07862         169 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEEDWPRDVALPRQAFHSK  247 (290)
T ss_pred             ccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhhchhhhcccchhccCC
Confidence            78999999999875 458999999999999999999999998744433 33333221 100  00               


Q ss_pred             -------ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          143 -------FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       143 -------~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                             +....+..++++|.+||. +|.+|||+.|+|+||||
T Consensus       248 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         248 SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             CCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence                   112346788999999999 99999999999999997


No 54 
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.97  E-value=2.4e-30  Score=267.89  Aligned_cols=177  Identities=27%  Similarity=0.423  Sum_probs=144.6

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC----
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS----   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~----   76 (502)
                      |+.||+|.+++.+.+.+++..++.|+.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||++..+...    
T Consensus        82 ~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nill~~~-~~ikL~DFG~a~~~~~~~~~~  158 (376)
T cd05598          82 YIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRD-GHIKLTDFGLCTGFRWTHDSK  158 (376)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHEEECCC-CCEEEEeCCCCcccccccccc
Confidence            6789999999999889999999999999999999999998  9999999999999876 79999999997532100    


Q ss_pred             ----------------------------------------CCcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHh
Q 010730           77 ----------------------------------------QQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEML  115 (502)
Q Consensus        77 ----------------------------------------~~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLL  115 (502)
                                                              ......+||+.|+|||++.+ .++.++|||||||++|+|+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell  238 (376)
T cd05598         159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML  238 (376)
T ss_pred             ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence                                                    00123579999999998864 5899999999999999999


Q ss_pred             hccCCCCCCCChHHHHHHhhcCCC--CCcccccccHHHHHHHHHhhhCcCCCC---CHHHHhcCCCCcCCC
Q 010730          116 TSEYPYSECSNPAQIYKKVTSGKL--PGAFHRIQDAEARRFVGKCLENVSKRL---PAKELLLDPFLASDA  181 (502)
Q Consensus       116 TG~~Pf~~~~~~~ql~~kI~~g~~--p~~~~~~~s~~l~~LI~kcL~dP~kRp---Sa~ELL~hPff~~~~  181 (502)
                      +|..||.+ .+..+....+.....  +.......++++.++|.+|+.+|.+|+   ++.+++.||||+...
T Consensus       239 ~G~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~~~p~~R~~~~t~~ell~h~~~~~~~  308 (376)
T cd05598         239 VGQPPFLA-DTPAETQLKVINWETTLHIPSQAKLSREASDLILRLCCGAEDRLGKNGADEIKAHPFFKGID  308 (376)
T ss_pred             hCCCCCCC-CCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHhcCHhhcCCCCCHHHHhCCCCcCCCC
Confidence            99999976 444455555543322  112223457899999999888999999   999999999998643


No 55 
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.97  E-value=1.1e-30  Score=278.13  Aligned_cols=175  Identities=29%  Similarity=0.425  Sum_probs=141.8

Q ss_pred             CCcHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            4 SGTLREYRK----KYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         4 gGsL~~yi~----k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      +|+|.+++.    ....+++..++.++.||+.||+|||+++  |+||||||+|||++.+.+.+||+|||+++.+......
T Consensus       150 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~--IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~  227 (440)
T PTZ00036        150 PQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF--ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRS  227 (440)
T ss_pred             CccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCcCHHHEEEcCCCCceeeeccccchhccCCCCc
Confidence            467877775    3467999999999999999999999998  9999999999999876557999999999877655555


Q ss_pred             ccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCC------------------C
Q 010730           80 HSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGK------------------L  139 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~------------------~  139 (502)
                      ...+||+.|+|||++.+  .|+.++|||||||++|+|++|.+||.+.....++.+.+....                  +
T Consensus       228 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~  307 (440)
T PTZ00036        228 VSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKF  307 (440)
T ss_pred             ccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccC
Confidence            56789999999998754  589999999999999999999999987655554444332100                  0


Q ss_pred             C--------CcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          140 P--------GAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       140 p--------~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      |        ..++...+.++++||.+||. +|.+|+|+.|+|+||||...
T Consensus       308 ~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~  357 (440)
T PTZ00036        308 PDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL  357 (440)
T ss_pred             CccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence            1        01122346789999999999 99999999999999999754


No 56 
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=99.97  E-value=1.8e-30  Score=263.50  Aligned_cols=176  Identities=27%  Similarity=0.516  Sum_probs=150.5

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.||+|.+++.+...+++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||+++... .....
T Consensus        77 y~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~--ivHrdikp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~  153 (316)
T cd05619          77 YLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKG--IVYRDLKLDNILLDTD-GHIKIADFGMCKENMLGDAKT  153 (316)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECCC-CCEEEccCCcceECCCCCCce
Confidence            6789999999998888999999999999999999999998  9999999999999887 799999999987542 22233


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ...+||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .+..++++.+..+..  .++...+..++++|.+|
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~-~~~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~  230 (316)
T cd05619         154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHG-HDEEELFQSIRMDNP--CYPRWLTREAKDILVKL  230 (316)
T ss_pred             eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhCCC--CCCccCCHHHHHHHHHH
Confidence            45679999999998864 589999999999999999999999976 556777777765543  23345678899999999


Q ss_pred             hh-CcCCCCCHH-HHhcCCCCcCCCC
Q 010730          159 LE-NVSKRLPAK-ELLLDPFLASDAG  182 (502)
Q Consensus       159 L~-dP~kRpSa~-ELL~hPff~~~~~  182 (502)
                      |. +|.+|+++. +++.||||+...+
T Consensus       231 l~~~P~~R~~~~~~l~~h~~~~~~~~  256 (316)
T cd05619         231 FVREPERRLGVKGDIRQHPFFREIDW  256 (316)
T ss_pred             hccCHhhcCCChHHHHcCcccCCCCH
Confidence            98 999999996 8999999987554


No 57 
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.97  E-value=1.6e-30  Score=269.95  Aligned_cols=178  Identities=26%  Similarity=0.401  Sum_probs=145.1

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC----
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS----   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~----   76 (502)
                      |+.||+|.+++.+.+.+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||++..+...    
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~--ivHrDlKp~NILl~~~-g~~kL~DFGla~~~~~~~~~~  158 (382)
T cd05625          82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMG--FIHRDIKPDNILIDRD-GHIKLTDFGLCTGFRWTHDSK  158 (382)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC-CCEEEeECCCCcccccccccc
Confidence            6789999999998888999999999999999999999998  9999999999999876 79999999997532100    


Q ss_pred             --------------------------------------------CCcccccCCCcccCccccc-cCCCCcccchhHHHHH
Q 010730           77 --------------------------------------------QQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCV  111 (502)
Q Consensus        77 --------------------------------------------~~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviL  111 (502)
                                                                  ....+.+||+.|+|||++. ..|+.++|||||||++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil  238 (382)
T cd05625         159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL  238 (382)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence                                                        0112457999999999875 4599999999999999


Q ss_pred             HHHhhccCCCCCCCChHHHHHHhhcCCC--CCcccccccHHHHHHHHHhhhCcCCCCC---HHHHhcCCCCcCCCC
Q 010730          112 LEMLTSEYPYSECSNPAQIYKKVTSGKL--PGAFHRIQDAEARRFVGKCLENVSKRLP---AKELLLDPFLASDAG  182 (502)
Q Consensus       112 yeLLTG~~Pf~~~~~~~ql~~kI~~g~~--p~~~~~~~s~~l~~LI~kcL~dP~kRpS---a~ELL~hPff~~~~~  182 (502)
                      |+|++|.+||.. .+..+...++.....  +.+.....+++++++|.+|+.+|.+|++   +.+++.||||+...+
T Consensus       239 ~elltG~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~p~~R~~~~~~~ei~~hp~f~~~~~  313 (382)
T cd05625         239 YEMLVGQPPFLA-QTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCRGPEDRLGKNGADEIKAHPFFKTIDF  313 (382)
T ss_pred             HHHHhCCCCCCC-CCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHccCHhHcCCCCCHHHHhcCCCcCCcCh
Confidence            999999999976 445555555544322  2222234578999999998889999987   999999999986543


No 58 
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.97  E-value=2.4e-30  Score=263.56  Aligned_cols=178  Identities=22%  Similarity=0.413  Sum_probs=149.2

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.||+|.+++.+.+.+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++... .....
T Consensus        77 ~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nili~~~-~~~kl~Dfg~~~~~~~~~~~~  153 (327)
T cd05617          77 YVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERG--IIYRDLKLDNVLLDAD-GHIKLTDYGMCKEGLGPGDTT  153 (327)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEeCC-CCEEEeccccceeccCCCCce
Confidence            6789999999998889999999999999999999999998  9999999999999887 799999999997532 22334


Q ss_pred             ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCC------CChHHHHHHhhcCCCCCcccccccHHHH
Q 010730           80 HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSEC------SNPAQIYKKVTSGKLPGAFHRIQDAEAR  152 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~------~~~~ql~~kI~~g~~p~~~~~~~s~~l~  152 (502)
                      ...+||+.|+|||++. ..++.++|||||||++|+|++|..||...      .....+++.+.....  .++...+..++
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~  231 (327)
T cd05617         154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI--RIPRFLSVKAS  231 (327)
T ss_pred             ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC--CCCCCCCHHHH
Confidence            5578999999999875 45899999999999999999999999532      233455666655433  34555678999


Q ss_pred             HHHHHhhh-CcCCCCC------HHHHhcCCCCcCCCCC
Q 010730          153 RFVGKCLE-NVSKRLP------AKELLLDPFLASDAGE  183 (502)
Q Consensus       153 ~LI~kcL~-dP~kRpS------a~ELL~hPff~~~~~~  183 (502)
                      ++|.+||. +|.+|++      +.+++.||||+...+.
T Consensus       232 ~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~  269 (327)
T cd05617         232 HVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWD  269 (327)
T ss_pred             HHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHH
Confidence            99999998 9999998      5799999999876543


No 59 
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97  E-value=2.3e-30  Score=262.37  Aligned_cols=176  Identities=27%  Similarity=0.504  Sum_probs=151.4

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.||+|..++.+.+.+++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||++.... .....
T Consensus        77 ~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~~~~  153 (318)
T cd05570          77 YVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERG--IIYRDLKLDNVLLDSE-GHIKIADFGMCKEGILGGVTT  153 (318)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEccCCCHHHeEECCC-CcEEecccCCCeecCcCCCcc
Confidence            5789999999999889999999999999999999999998  9999999999999887 799999999987532 22233


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ...+||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .+..+++..+.....  .++...+..+++||.+|
T Consensus       154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~-~~~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~  230 (318)
T cd05570         154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEG-DDEDELFQSILEDEV--RYPRWLSKEAKSILKSF  230 (318)
T ss_pred             cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCC-CCHHHHHHHHHcCCC--CCCCcCCHHHHHHHHHH
Confidence            45679999999998864 589999999999999999999999976 566777777766554  33445678999999999


Q ss_pred             hh-CcCCCCCH-----HHHhcCCCCcCCCC
Q 010730          159 LE-NVSKRLPA-----KELLLDPFLASDAG  182 (502)
Q Consensus       159 L~-dP~kRpSa-----~ELL~hPff~~~~~  182 (502)
                      |. +|.+||++     .+++.||||+...+
T Consensus       231 l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~  260 (318)
T cd05570         231 LTKNPEKRLGCLPTGEQDIKGHPFFREIDW  260 (318)
T ss_pred             ccCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence            98 99999999     99999999987544


No 60 
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=8.2e-31  Score=266.17  Aligned_cols=174  Identities=32%  Similarity=0.458  Sum_probs=144.3

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccC---CCCcc
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG---SQQAH   80 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~---~~~~~   80 (502)
                      +-+|.+.++..+.|+...++.++.|||.||.|+|+.+  |+||||||.|+|++.+ ..+||+|||+|+....   ...++
T Consensus       109 etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAn--ViHRDLKPsNll~n~~-c~lKI~DFGLAR~~~~~~~~~~mT  185 (359)
T KOG0660|consen  109 ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSAN--VIHRDLKPSNLLLNAD-CDLKICDFGLARYLDKFFEDGFMT  185 (359)
T ss_pred             hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhccc--ccccccchhheeeccC-CCEEeccccceeeccccCcccchh
Confidence            4578888988888999999999999999999999999  9999999999999998 5899999999998753   44567


Q ss_pred             cccCCCcccCccccc--cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHH--------------Hhhc--------
Q 010730           81 SVIGTPEFMAPELYE--EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYK--------------KVTS--------  136 (502)
Q Consensus        81 s~vGTp~Y~APEvl~--~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~--------------kI~~--------  136 (502)
                      ..+-|.+|.|||++.  ..|+.++||||+|||+.||++|++-|++.....|+-.              .+.+        
T Consensus       186 eYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~  265 (359)
T KOG0660|consen  186 EYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIK  265 (359)
T ss_pred             cceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHH
Confidence            788999999999774  4699999999999999999999999988655555422              1110        


Q ss_pred             --CCCC-Ccc---cccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          137 --GKLP-GAF---HRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       137 --g~~p-~~~---~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                        ...| ..|   -...++.+.+|+.+||. ||.+|+||+|+|+||||...
T Consensus       266 slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~  316 (359)
T KOG0660|consen  266 SLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPY  316 (359)
T ss_pred             hCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhh
Confidence              1111 111   12357899999999999 99999999999999999753


No 61 
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.97  E-value=3.4e-30  Score=265.23  Aligned_cols=189  Identities=28%  Similarity=0.442  Sum_probs=154.7

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccC---
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG---   75 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~---   75 (502)
                      |+.||+|...++++  +.+++..++.|+..|+.||+|||..|  ||+||||||||||..+ |+|-|.||.|+.....   
T Consensus       158 yCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG--ivYRDLKPENILvred-GHIMLsDFDLS~~~~~~Pt  234 (459)
T KOG0610|consen  158 YCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG--IVYRDLKPENILVRED-GHIMLSDFDLSLRCPVSPT  234 (459)
T ss_pred             cCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc--eeeccCCcceeEEecC-CcEEeeeccccccCCCCCe
Confidence            78999999999875  56999999999999999999999999  9999999999999987 8999999998743210   


Q ss_pred             ------------------------------C-C-----------------------CcccccCCCcccCccccccC-CCC
Q 010730           76 ------------------------------S-Q-----------------------QAHSVIGTPEFMAPELYEED-YNE  100 (502)
Q Consensus        76 ------------------------------~-~-----------------------~~~s~vGTp~Y~APEvl~~~-ys~  100 (502)
                                                    . .                       ...++|||-.|+|||++.+. -+.
T Consensus       235 ~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgs  314 (459)
T KOG0610|consen  235 LVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGS  314 (459)
T ss_pred             eeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCc
Confidence                                          0 0                       01347899999999999865 789


Q ss_pred             cccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhhh-CcCCCCC----HHHHhcCC
Q 010730          101 LVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLP----AKELLLDP  175 (502)
Q Consensus       101 ~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpS----a~ELL~hP  175 (502)
                      ++|+|+|||++||||.|..||.+..+.+. +.+|....+..+-....+..+++||+++|. ||.+|+.    |.||-+||
T Consensus       315 AVDWWtfGIflYEmLyG~TPFKG~~~~~T-l~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~Hp  393 (459)
T KOG0610|consen  315 AVDWWTFGIFLYEMLYGTTPFKGSNNKET-LRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHP  393 (459)
T ss_pred             hhhHHHHHHHHHHHHhCCCCcCCCCchhh-HHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCc
Confidence            99999999999999999999988555444 445554444323333557899999999998 9999998    99999999


Q ss_pred             CCcCCCCCCCC---CCCCCCc
Q 010730          176 FLASDAGEPLL---IPQVPSF  193 (502)
Q Consensus       176 ff~~~~~~~l~---~p~~p~~  193 (502)
                      ||++-+|..+.   +|.+|..
T Consensus       394 FF~gVnWaLir~~~PP~iP~~  414 (459)
T KOG0610|consen  394 FFEGVNWALIRCARPPEIPKP  414 (459)
T ss_pred             cccCCChhheeccCCCcCCCc
Confidence            99999987532   4444544


No 62 
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.97  E-value=2.9e-30  Score=268.25  Aligned_cols=177  Identities=22%  Similarity=0.448  Sum_probs=148.1

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC--C
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ--Q   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~--~   78 (502)
                      |+.||+|.+++.+. .+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||++.......  .
T Consensus       124 y~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~-~~~kL~DfG~~~~~~~~~~~~  199 (370)
T cd05596         124 YMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKS-GHLKLADFGTCMKMDANGMVR  199 (370)
T ss_pred             CCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEcCC-CCEEEEeccceeeccCCCccc
Confidence            67899999999764 5899999999999999999999998  9999999999999876 799999999998764332  2


Q ss_pred             cccccCCCcccCcccccc-----CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccc--cccHHH
Q 010730           79 AHSVIGTPEFMAPELYEE-----DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHR--IQDAEA  151 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~-----~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~--~~s~~l  151 (502)
                      ....+||+.|+|||++..     .++.++|||||||++|+|++|..||.. .+....+.++..+.....++.  ..+.++
T Consensus       200 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  278 (370)
T cd05596         200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTYSKIMDHKNSLTFPDDIEISKQA  278 (370)
T ss_pred             CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCC-CCHHHHHHHHHcCCCcCCCCCcCCCCHHH
Confidence            245689999999998753     378899999999999999999999976 556677778776543222222  458899


Q ss_pred             HHHHHHhhh-CcCC--CCCHHHHhcCCCCcCCCC
Q 010730          152 RRFVGKCLE-NVSK--RLPAKELLLDPFLASDAG  182 (502)
Q Consensus       152 ~~LI~kcL~-dP~k--RpSa~ELL~hPff~~~~~  182 (502)
                      ++||.+||. +|.+  |+++.|++.||||+...+
T Consensus       279 ~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~~  312 (370)
T cd05596         279 KDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQW  312 (370)
T ss_pred             HHHHHHHccChhhccCCCCHHHHhcCcccCCCCh
Confidence            999999998 7876  999999999999987654


No 63 
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=1.3e-31  Score=277.11  Aligned_cols=174  Identities=29%  Similarity=0.518  Sum_probs=151.5

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC-c
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-A   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~-~   79 (502)
                      |+.||++.+.++..+.+++..+..++++++.||.|||.++  .||||||+.|||+..+ |.|||+|||++.++..... .
T Consensus        92 y~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~--kiHrDIKaanil~s~~-g~vkl~DfgVa~ql~~~~~rr  168 (467)
T KOG0201|consen   92 YCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEK--KIHRDIKAANILLSES-GDVKLADFGVAGQLTNTVKRR  168 (467)
T ss_pred             HhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcc--eecccccccceeEecc-CcEEEEecceeeeeechhhcc
Confidence            5789999999998888899999999999999999999999  9999999999999988 8999999999988765443 4


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      .+++|||.||||||+.+ .|+.++||||||++.+||++|.+|+.++....-++ .| ....|+.+....++.+++||..|
T Consensus       169 ~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf-lI-pk~~PP~L~~~~S~~~kEFV~~C  246 (467)
T KOG0201|consen  169 KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF-LI-PKSAPPRLDGDFSPPFKEFVEAC  246 (467)
T ss_pred             ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE-ec-cCCCCCccccccCHHHHHHHHHH
Confidence            78999999999999876 69999999999999999999999998865433222 12 22334455667789999999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcC
Q 010730          159 LE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~  179 (502)
                      |+ +|..||+|.+||+|+|++.
T Consensus       247 L~k~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  247 LDKNPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             hhcCcccCcCHHHHhhhHHHHh
Confidence            99 9999999999999999986


No 64 
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=99.97  E-value=1.9e-30  Score=263.56  Aligned_cols=176  Identities=27%  Similarity=0.426  Sum_probs=150.7

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.||+|.+++.+.+.+.+..++.++.||+.||.|||++|  |+||||||+|||++.+ +.+||+|||+++... .....
T Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~g--iiHrDlkp~Nili~~~-~~~kl~DfG~a~~~~~~~~~~  153 (325)
T cd05602          77 YINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQ-GHIVLTDFGLCKENIEHNGTT  153 (325)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCC-CCEEEccCCCCcccccCCCCc
Confidence            6789999999999888999999999999999999999998  9999999999999876 799999999997542 22334


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ...+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+ .+..++++.+.....  .+....+..++++|.+|
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~-~~~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~  230 (325)
T cd05602         154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS-RNTAEMYDNILNKPL--QLKPNITNSARHLLEGL  230 (325)
T ss_pred             ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCC-CCHHHHHHHHHhCCc--CCCCCCCHHHHHHHHHH
Confidence            55789999999998865 588999999999999999999999976 566777777766544  33445678999999999


Q ss_pred             hh-CcCCCCCHH----HHhcCCCCcCCCC
Q 010730          159 LE-NVSKRLPAK----ELLLDPFLASDAG  182 (502)
Q Consensus       159 L~-dP~kRpSa~----ELL~hPff~~~~~  182 (502)
                      |. +|.+|+++.    ++++|+||....+
T Consensus       231 l~~~p~~R~~~~~~~~~i~~~~~~~~~~~  259 (325)
T cd05602         231 LQKDRTKRLGAKDDFMEIKNHIFFSPINW  259 (325)
T ss_pred             cccCHHHCCCCCCCHHHHhcCcccCCCCH
Confidence            98 999999865    8999999976554


No 65 
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.97  E-value=2.8e-30  Score=263.58  Aligned_cols=177  Identities=22%  Similarity=0.417  Sum_probs=147.5

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.+|+|..++.+.+.+++..++.++.||+.||+|||+++  |+||||||+||+++.+ +.+||+|||+++... .....
T Consensus        77 ~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dikp~Nili~~~-~~~kL~DfG~~~~~~~~~~~~  153 (329)
T cd05618          77 YVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSE-GHIKLTDYGMCKEGLRPGDTT  153 (329)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECCC-CCEEEeeCCccccccCCCCcc
Confidence            6789999999998889999999999999999999999998  9999999999999887 799999999987532 22334


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCC--------CChHHHHHHhhcCCCCCcccccccHH
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSEC--------SNPAQIYKKVTSGKLPGAFHRIQDAE  150 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~--------~~~~ql~~kI~~g~~p~~~~~~~s~~  150 (502)
                      ...+||+.|+|||++.+ .++.++|||||||++|+|++|..||...        .....+++.+.....  .++...+..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--~~p~~~~~~  231 (329)
T cd05618         154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--RIPRSLSVK  231 (329)
T ss_pred             ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC--CCCCCCCHH
Confidence            45789999999998864 5889999999999999999999999521        122345555555443  344556789


Q ss_pred             HHHHHHHhhh-CcCCCCC------HHHHhcCCCCcCCCC
Q 010730          151 ARRFVGKCLE-NVSKRLP------AKELLLDPFLASDAG  182 (502)
Q Consensus       151 l~~LI~kcL~-dP~kRpS------a~ELL~hPff~~~~~  182 (502)
                      ++++|.+||. +|.+|++      +.+++.||||+...+
T Consensus       232 ~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~  270 (329)
T cd05618         232 AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  270 (329)
T ss_pred             HHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence            9999999998 9999998      589999999986544


No 66 
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=4.1e-31  Score=265.13  Aligned_cols=178  Identities=28%  Similarity=0.512  Sum_probs=161.6

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCcee-ccCCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI-LRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~-~~~~~~~   79 (502)
                      |..||.|+-.+.+.+.+++..++.|...|+.||.|||+++  ||.||||.+|+|++.+ |++||+|||+++. +..+..+
T Consensus       249 yanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~--ivYRDlKLENLlLDkD-GHIKitDFGLCKE~I~~g~t~  325 (516)
T KOG0690|consen  249 YANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRN--IVYRDLKLENLLLDKD-GHIKITDFGLCKEEIKYGDTT  325 (516)
T ss_pred             EccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCC--eeeeechhhhheeccC-CceEeeecccchhccccccee
Confidence            5789999999999999999999999999999999999999  9999999999999987 8999999999985 4555667


Q ss_pred             ccccCCCcccCccccccC-CCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~~-ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      .++||||.|+|||++... |+.++|+|.+||++|||+||++||++ .+-..++..|..+.+  .++...+++++.|+..+
T Consensus       326 kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn-~dh~kLFeLIl~ed~--kFPr~ls~eAktLLsGL  402 (516)
T KOG0690|consen  326 KTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYN-KDHEKLFELILMEDL--KFPRTLSPEAKTLLSGL  402 (516)
T ss_pred             ccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccc-cchhHHHHHHHhhhc--cCCccCCHHHHHHHHHH
Confidence            899999999999999865 99999999999999999999999988 555778888877766  57777899999999999


Q ss_pred             hh-CcCCCCC-----HHHHhcCCCCcCCCCCC
Q 010730          159 LE-NVSKRLP-----AKELLLDPFLASDAGEP  184 (502)
Q Consensus       159 L~-dP~kRpS-----a~ELL~hPff~~~~~~~  184 (502)
                      |. ||.+|+.     |+|+.+|+||+.-+|..
T Consensus       403 L~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~  434 (516)
T KOG0690|consen  403 LKKDPKKRLGGGPDDAKEIMRHRFFASVDWEA  434 (516)
T ss_pred             hhcChHhhcCCCchhHHHHHhhhhhccCCHHH
Confidence            98 9999986     99999999999887754


No 67 
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.97  E-value=1.8e-30  Score=263.73  Aligned_cols=175  Identities=26%  Similarity=0.431  Sum_probs=149.7

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.||+|..++.+.+.+++..++.++.||+.||+|||++|  |+||||||+|||++.+ +.+||+|||+++... .....
T Consensus        77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~g--ivH~Dlkp~NIll~~~-~~~kL~DfG~~~~~~~~~~~~  153 (325)
T cd05604          77 FVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSIN--IVYRDLKPENILLDSQ-GHVVLTDFGLCKEGIAQSDTT  153 (325)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCC-CCEEEeecCCcccCCCCCCCc
Confidence            6789999999999899999999999999999999999998  9999999999999877 799999999987532 22333


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ...+||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .+..++++++......  +....+..+.++|.+|
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~l  230 (325)
T cd05604         154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYC-RDVAEMYDNILHKPLV--LRPGASLTAWSILEEL  230 (325)
T ss_pred             ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCC-CCHHHHHHHHHcCCcc--CCCCCCHHHHHHHHHH
Confidence            45689999999998864 588999999999999999999999976 5667777777765542  2334578899999999


Q ss_pred             hh-CcCCCCCH----HHHhcCCCCcCCC
Q 010730          159 LE-NVSKRLPA----KELLLDPFLASDA  181 (502)
Q Consensus       159 L~-dP~kRpSa----~ELL~hPff~~~~  181 (502)
                      |. +|.+||++    .+++.||||....
T Consensus       231 l~~~p~~R~~~~~~~~~i~~h~~f~~~~  258 (325)
T cd05604         231 LEKDRQRRLGAKEDFLEIQEHPFFESLS  258 (325)
T ss_pred             hccCHHhcCCCCCCHHHHhcCCCcCCCC
Confidence            98 99999986    5999999998654


No 68 
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.97  E-value=9.7e-31  Score=260.68  Aligned_cols=170  Identities=29%  Similarity=0.501  Sum_probs=142.4

Q ss_pred             cHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCccccc
Q 010730            6 TLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQAHSVI   83 (502)
Q Consensus         6 sL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~~s~v   83 (502)
                      |+.+-+.++ ..++.+.++.++.|++.|+.|||+++  +|||||||+|||++.+ |.+||||||+|+.+. ++...+.++
T Consensus        86 TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n--~IHRDIKPENILit~~-gvvKLCDFGFAR~L~~pgd~YTDYV  162 (396)
T KOG0593|consen   86 TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNN--CIHRDIKPENILITQN-GVVKLCDFGFARTLSAPGDNYTDYV  162 (396)
T ss_pred             HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcC--eecccCChhheEEecC-CcEEeccchhhHhhcCCcchhhhhh
Confidence            444444444 46999999999999999999999999  9999999999999988 899999999999887 444556689


Q ss_pred             CCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc-CCC-------------------CC
Q 010730           84 GTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS-GKL-------------------PG  141 (502)
Q Consensus        84 GTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~-g~~-------------------p~  141 (502)
                      -|.+|.|||++-+  .|+..+||||+||++.||++|.+-|++.++.+|+|..... |.+                   |.
T Consensus       163 ATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~  242 (396)
T KOG0593|consen  163 ATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPE  242 (396)
T ss_pred             hhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCC
Confidence            9999999998754  5999999999999999999999999999999999876532 221                   11


Q ss_pred             c-----cc---ccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCc
Q 010730          142 A-----FH---RIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLA  178 (502)
Q Consensus       142 ~-----~~---~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~  178 (502)
                      .     ++   ...+..+.+|+.+||. ||.+|++.+|+|.||||.
T Consensus       243 ~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd  288 (396)
T KOG0593|consen  243 PEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD  288 (396)
T ss_pred             CCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence            0     00   1134578899999999 999999999999999994


No 69 
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=99.97  E-value=4.2e-30  Score=254.09  Aligned_cols=174  Identities=22%  Similarity=0.363  Sum_probs=137.6

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC--C
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ--Q   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~--~   78 (502)
                      |+.+|.|..+......+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++..+....  .
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~~~~  157 (287)
T cd07848          81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND--IVHRDIKPENLLISHN-DVLKLCDFGFARNLSEGSNAN  157 (287)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCC-CcEEEeeccCccccccccccc
Confidence            5667777666655667999999999999999999999998  9999999999999876 799999999998764322  2


Q ss_pred             cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc-CCC-----------------
Q 010730           79 AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS-GKL-----------------  139 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~-g~~-----------------  139 (502)
                      .....||+.|+|||++.+ .++.++|||||||++|+|++|++||........+...... +.+                 
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T cd07848         158 YTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL  237 (287)
T ss_pred             ccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccc
Confidence            234679999999998754 5899999999999999999999999875443333221110 110                 


Q ss_pred             --CC---------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          140 --PG---------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       140 --p~---------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                        +.         ......+..+++||.+||. ||.+|||++|+|+||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         238 RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             ccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence              00         0111246789999999999 99999999999999997


No 70 
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=99.97  E-value=5.7e-30  Score=259.88  Aligned_cols=174  Identities=28%  Similarity=0.515  Sum_probs=147.8

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccC-CCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-SQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~-~~~~   79 (502)
                      |+.||+|..++.+ +.+++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||+++.... ....
T Consensus        83 ~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrdlkp~Nill~~~-~~~kL~Dfg~~~~~~~~~~~~  158 (324)
T cd05589          83 YAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENK--IVYRDLKLDNLLLDTE-GFVKIADFGLCKEGMGFGDRT  158 (324)
T ss_pred             CCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECCC-CcEEeCcccCCccCCCCCCcc
Confidence            6789999999865 57999999999999999999999998  9999999999999887 7999999999875432 2234


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ...+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+ .+..+++..+..+..  .++...+..+.++|.+|
T Consensus       159 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~-~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~  235 (324)
T cd05589         159 STFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPG-DDEEEVFDSIVNDEV--RYPRFLSREAISIMRRL  235 (324)
T ss_pred             cccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHH
Confidence            45789999999998764 588999999999999999999999976 566677777766544  23445678899999999


Q ss_pred             hh-CcCCCC-----CHHHHhcCCCCcCCC
Q 010730          159 LE-NVSKRL-----PAKELLLDPFLASDA  181 (502)
Q Consensus       159 L~-dP~kRp-----Sa~ELL~hPff~~~~  181 (502)
                      |. +|.+||     ++.+++.||||+...
T Consensus       236 L~~dP~~R~~~~~~~~~~l~~~~~f~~~~  264 (324)
T cd05589         236 LRRNPERRLGSGEKDAEDVKKQPFFRDIN  264 (324)
T ss_pred             hhcCHhHcCCCCCCCHHHHhhCCCcCCCC
Confidence            99 999999     699999999997643


No 71 
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.97  E-value=3.9e-30  Score=260.47  Aligned_cols=176  Identities=24%  Similarity=0.382  Sum_probs=150.1

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~~   79 (502)
                      |+.||+|..++.+.+.+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||+++... .....
T Consensus        77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~~-~~~kl~Dfg~~~~~~~~~~~~  153 (321)
T cd05603          77 YVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLN--IIYRDLKPENILLDSQ-GHVVLTDFGLCKEGVEPEETT  153 (321)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCC-CCEEEccCCCCccCCCCCCcc
Confidence            6789999999998888999999999999999999999998  9999999999999886 799999999987532 22233


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ...+||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .+..+++..+.....  .++...+..+.++|.+|
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~-~~~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~  230 (321)
T cd05603         154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYS-RDVSQMYDNILHKPL--QLPGGKTVAACDLLVGL  230 (321)
T ss_pred             ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCC-CCHHHHHHHHhcCCC--CCCCCCCHHHHHHHHHH
Confidence            45679999999998864 588999999999999999999999976 566777888776644  34445678899999999


Q ss_pred             hh-CcCCCCCH----HHHhcCCCCcCCCC
Q 010730          159 LE-NVSKRLPA----KELLLDPFLASDAG  182 (502)
Q Consensus       159 L~-dP~kRpSa----~ELL~hPff~~~~~  182 (502)
                      |. +|.+|+++    .+++.|+||....+
T Consensus       231 l~~~p~~R~~~~~~~~~~~~~~~~~~~~~  259 (321)
T cd05603         231 LHKDQRRRLGAKADFLEIKNHVFFSPINW  259 (321)
T ss_pred             ccCCHhhcCCCCCCHHHHhCCCCcCCCCH
Confidence            99 99999875    59999999976443


No 72 
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=1.2e-30  Score=280.17  Aligned_cols=181  Identities=34%  Similarity=0.602  Sum_probs=156.5

Q ss_pred             CCCCcHHHHHH-hCCCC--CHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-C
Q 010730            2 FTSGTLREYRK-KYTRV--DIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-Q   77 (502)
Q Consensus         2 ~tgGsL~~yi~-k~~~L--~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~   77 (502)
                      ..||+|..+++ +.+++  ++..+..|.+|||+||.|||.+.  |||||||-+|+|++.-.|.+||.|||.++.+..- .
T Consensus       654 VPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~--IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP  731 (1226)
T KOG4279|consen  654 VPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENK--IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP  731 (1226)
T ss_pred             CCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcc--eeeccccCCcEEEeeccceEEecccccchhhccCCc
Confidence            47999999996 46888  99999999999999999999998  9999999999999987799999999999887543 3


Q ss_pred             CcccccCCCcccCccccc---cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           78 QAHSVIGTPEFMAPELYE---EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        78 ~~~s~vGTp~Y~APEvl~---~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      ...++-||..|||||++.   ..|+.++|||||||++.||.||++||.+..++....-++.--+.-++++...+++++.|
T Consensus       732 ~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~F  811 (1226)
T KOG4279|consen  732 CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNF  811 (1226)
T ss_pred             cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHH
Confidence            356788999999999985   35999999999999999999999999987777655555544444456666778999999


Q ss_pred             HHHhhh-CcCCCCCHHHHhcCCCCcCCCCCC
Q 010730          155 VGKCLE-NVSKRLPAKELLLDPFLASDAGEP  184 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~hPff~~~~~~~  184 (502)
                      |.+|+. +|.+||+|++||.+||++..+..+
T Consensus       812 ilrcFepd~~~R~sA~~LL~DpFlq~~~kk~  842 (1226)
T KOG4279|consen  812 ILRCFEPDPCDRPSAKDLLQDPFLQHNNKKP  842 (1226)
T ss_pred             HHHHcCCCcccCccHHHhccCcccccCCCCC
Confidence            999999 999999999999999998775443


No 73 
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.97  E-value=8.2e-30  Score=265.13  Aligned_cols=178  Identities=26%  Similarity=0.379  Sum_probs=142.4

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC----
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS----   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~----   76 (502)
                      |+.||+|.+++.+.+.+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++.+...    
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~g--ivHrDlKp~Nili~~~-~~~kL~DFGl~~~~~~~~~~~  158 (381)
T cd05626          82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMG--FIHRDIKPDNILIDLD-GHIKLTDFGLCTGFRWTHNSK  158 (381)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCcHHHEEECCC-CCEEEeeCcCCcccccccccc
Confidence            5789999999999889999999999999999999999998  9999999999999876 79999999997533100    


Q ss_pred             --------------------------------------------CCcccccCCCcccCcccccc-CCCCcccchhHHHHH
Q 010730           77 --------------------------------------------QQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCV  111 (502)
Q Consensus        77 --------------------------------------------~~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviL  111 (502)
                                                                  ....+.+||+.|+|||++.+ .|+.++|||||||++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il  238 (381)
T cd05626         159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL  238 (381)
T ss_pred             cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence                                                        01134689999999998764 589999999999999


Q ss_pred             HHHhhccCCCCCCCChHHHHHHhhcC--CCCCcccccccHHHHHHHHHhhh---CcCCCCCHHHHhcCCCCcCCCC
Q 010730          112 LEMLTSEYPYSECSNPAQIYKKVTSG--KLPGAFHRIQDAEARRFVGKCLE---NVSKRLPAKELLLDPFLASDAG  182 (502)
Q Consensus       112 yeLLTG~~Pf~~~~~~~ql~~kI~~g--~~p~~~~~~~s~~l~~LI~kcL~---dP~kRpSa~ELL~hPff~~~~~  182 (502)
                      |+|++|..||... +..+...++...  ..........++++++||.+|+.   ++..|+++.+++.||||....+
T Consensus       239 ~elltG~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~~  313 (381)
T cd05626         239 FEMLVGQPPFLAP-TPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVDF  313 (381)
T ss_pred             HHHHhCCCCCcCC-CHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCCCh
Confidence            9999999999764 344444444432  22222222457899999999664   5566999999999999986544


No 74 
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.97  E-value=2.1e-30  Score=262.06  Aligned_cols=175  Identities=27%  Similarity=0.435  Sum_probs=150.2

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~~   79 (502)
                      |+.+|+|.+++.+...+++..++.|+.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||++...... ...
T Consensus        79 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~-~~~kL~Dfg~~~~~~~~~~~~  155 (318)
T cd05582          79 FLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEE-GHIKLTDFGLSKESIDHEKKA  155 (318)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHeEECCC-CcEEEeeccCCcccCCCCCce
Confidence            5789999999998888999999999999999999999998  9999999999999876 79999999999765433 334


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .+..+++..+.....  .++...++.++++|.+|
T Consensus       156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~-~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~  232 (318)
T cd05582         156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQG-KDRKETMTMILKAKL--GMPQFLSPEAQSLLRAL  232 (318)
T ss_pred             ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCC-CCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHH
Confidence            45789999999998864 588899999999999999999999976 455666666665554  23445678999999999


Q ss_pred             hh-CcCCCCC-----HHHHhcCCCCcCCC
Q 010730          159 LE-NVSKRLP-----AKELLLDPFLASDA  181 (502)
Q Consensus       159 L~-dP~kRpS-----a~ELL~hPff~~~~  181 (502)
                      |. +|.+||+     +.+++.||||....
T Consensus       233 l~~~P~~R~~a~~~~~~~~~~~~~~~~~~  261 (318)
T cd05582         233 FKRNPANRLGAGPDGVEEIKRHPFFSTID  261 (318)
T ss_pred             hhcCHhHcCCCCCCCHHHHhCCCCcCCCC
Confidence            98 9999999     77899999997654


No 75 
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.97  E-value=6.9e-30  Score=259.76  Aligned_cols=176  Identities=23%  Similarity=0.434  Sum_probs=151.2

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~~   79 (502)
                      |+.||+|.+++.+.+.+++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||+++..... ...
T Consensus        82 y~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivHrDikp~Nill~~~-~~ikL~Dfg~~~~~~~~~~~~  158 (323)
T cd05615          82 YVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRG--IIYRDLKLDNVMLDSE-GHIKIADFGMCKEHMVDGVTT  158 (323)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCC-CCEEEeccccccccCCCCccc
Confidence            6789999999999889999999999999999999999998  9999999999999977 79999999998754322 223


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+ .+..++++.+.....  .++...+.++.+++.+|
T Consensus       159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~-~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~  235 (323)
T cd05615         159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG-EDEDELFQSIMEHNV--SYPKSLSKEAVSICKGL  235 (323)
T ss_pred             cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCC-CCHHHHHHHHHhCCC--CCCccCCHHHHHHHHHH
Confidence            45679999999998864 589999999999999999999999976 566777888776654  33445678999999999


Q ss_pred             hh-CcCCCCC-----HHHHhcCCCCcCCCC
Q 010730          159 LE-NVSKRLP-----AKELLLDPFLASDAG  182 (502)
Q Consensus       159 L~-dP~kRpS-----a~ELL~hPff~~~~~  182 (502)
                      |. +|.+|++     .++++.||||+...+
T Consensus       236 l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~  265 (323)
T cd05615         236 MTKHPSKRLGCGPEGERDIREHAFFRRIDW  265 (323)
T ss_pred             cccCHhhCCCCCCCCHHHHhcCcccCCCCH
Confidence            98 9999997     579999999987544


No 76 
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=99.97  E-value=6.1e-30  Score=266.28  Aligned_cols=176  Identities=24%  Similarity=0.462  Sum_probs=144.7

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC--
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ--   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~--   78 (502)
                      |+.||+|.+++.+. .+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||++..+.....  
T Consensus       124 y~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~--IvHrDLKp~NILl~~~-~~~kL~DFG~a~~~~~~~~~~  199 (370)
T cd05621         124 YMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMG--LIHRDVKPDNMLLDKH-GHLKLADFGTCMKMDETGMVR  199 (370)
T ss_pred             CCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECCC-CCEEEEecccceecccCCcee
Confidence            67899999999765 5899999999999999999999998  9999999999999876 7999999999987643222  


Q ss_pred             cccccCCCcccCcccccc-----CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCccc--ccccHHH
Q 010730           79 AHSVIGTPEFMAPELYEE-----DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFH--RIQDAEA  151 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~-----~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~--~~~s~~l  151 (502)
                      ..+.+||+.|+|||++.+     .++.++|||||||++|+|++|..||.. .+....+.++........++  ...+..+
T Consensus       200 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~s~~~  278 (370)
T cd05621         200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA-DSLVGTYSKIMDHKNSLNFPEDVEISKHA  278 (370)
T ss_pred             cccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCC-CCHHHHHHHHHhCCcccCCCCcccCCHHH
Confidence            245789999999998853     278899999999999999999999976 45566677776543222222  2357889


Q ss_pred             HHHHHHhhhC-c--CCCCCHHHHhcCCCCcCCC
Q 010730          152 RRFVGKCLEN-V--SKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       152 ~~LI~kcL~d-P--~kRpSa~ELL~hPff~~~~  181 (502)
                      +++|.+||.+ +  ..|+++.|+++||||+...
T Consensus       279 ~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~  311 (370)
T cd05621         279 KNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQ  311 (370)
T ss_pred             HHHHHHHccCchhccCCCCHHHHhcCcccCCCC
Confidence            9999999973 3  3488999999999998654


No 77 
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.97  E-value=1.3e-30  Score=275.73  Aligned_cols=171  Identities=27%  Similarity=0.458  Sum_probs=151.4

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC-cccc
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-AHSV   82 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~-~~s~   82 (502)
                      -|+|++++...+.++|+.++.++.|++.||.|||+++  |+|||+||.|||+.+. |.+|++|||+|+.+..... +.++
T Consensus        84 ~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~r--ilhrd~kPqniLl~~~-~~~KlcdFg~Ar~m~~~t~vltsi  160 (808)
T KOG0597|consen   84 VGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNR--ILHRDMKPQNILLEKG-GTLKLCDFGLARAMSTNTSVLTSI  160 (808)
T ss_pred             hhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcC--cccccCCcceeeecCC-CceeechhhhhhhcccCceeeeec
Confidence            4599999999999999999999999999999999999  9999999999999987 8999999999998765444 4567


Q ss_pred             cCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhhh-
Q 010730           83 IGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-  160 (502)
Q Consensus        83 vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-  160 (502)
                      .|||.|||||++++ .|+..+|+||||||+|||++|++||.. ....++.+.|.....  .++...+..+.+|+..+|. 
T Consensus       161 kGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-~si~~Lv~~I~~d~v--~~p~~~S~~f~nfl~gLL~k  237 (808)
T KOG0597|consen  161 KGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-RSITQLVKSILKDPV--KPPSTASSSFVNFLQGLLIK  237 (808)
T ss_pred             cCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-HHHHHHHHHHhcCCC--CCcccccHHHHHHHHHHhhc
Confidence            89999999999875 499999999999999999999999976 556677777776554  3344668899999999998 


Q ss_pred             CcCCCCCHHHHhcCCCCcCC
Q 010730          161 NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       161 dP~kRpSa~ELL~hPff~~~  180 (502)
                      ||.+|++..+|+.|||.+..
T Consensus       238 dP~~RltW~~Ll~HpF~k~~  257 (808)
T KOG0597|consen  238 DPAQRLTWTDLLGHPFWKGK  257 (808)
T ss_pred             ChhhcccHHHHhcChHHhhh
Confidence            99999999999999998754


No 78 
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97  E-value=1.3e-30  Score=271.77  Aligned_cols=162  Identities=23%  Similarity=0.512  Sum_probs=141.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC------CcccccCCCcccC
Q 010730           17 VDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ------QAHSVIGTPEFMA   90 (502)
Q Consensus        17 L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~------~~~s~vGTp~Y~A   90 (502)
                      +++.+++.|++.++.||+|||.||  ||||||||+|+|++.+ |+|||+|||++..+..+.      .+...+|||.|||
T Consensus       207 ls~~~Ar~ylrDvv~GLEYLH~Qg--iiHRDIKPsNLLl~~~-g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~A  283 (576)
T KOG0585|consen  207 LSEQQARKYLRDVVLGLEYLHYQG--IIHRDIKPSNLLLSSD-GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFA  283 (576)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEEcCC-CcEEeeccceeeecccCCccccHHHHhhcCCCccccc
Confidence            899999999999999999999999  9999999999999988 899999999998763321      2344789999999


Q ss_pred             ccccccC-----CCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhhh-CcCC
Q 010730           91 PELYEED-----YNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSK  164 (502)
Q Consensus        91 PEvl~~~-----ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~k  164 (502)
                      ||++.+.     .+.+.||||+||+||.|+.|++||.+ ....++|++|....+..+........+++||.+||. ||.+
T Consensus       284 PE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~-~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~  362 (576)
T KOG0585|consen  284 PELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD-DFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQ  362 (576)
T ss_pred             hHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc-chHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhh
Confidence            9987542     46789999999999999999999977 777899999999887555555568899999999998 9999


Q ss_pred             CCCHHHHhcCCCCcCCCC
Q 010730          165 RLPAKELLLDPFLASDAG  182 (502)
Q Consensus       165 RpSa~ELL~hPff~~~~~  182 (502)
                      |++..++..|||......
T Consensus       363 Ri~l~~ik~Hpwvt~~g~  380 (576)
T KOG0585|consen  363 RITLPDIKLHPWVTRDGD  380 (576)
T ss_pred             eeehhhheecceeccCCC
Confidence            999999999999976543


No 79 
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.97  E-value=1.6e-30  Score=264.41  Aligned_cols=176  Identities=31%  Similarity=0.469  Sum_probs=149.3

Q ss_pred             CcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            5 GTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         5 GsL~~yi~k----~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      -||.++++.    ..+++...++-++.||++||.|||++|  |+||||||+|+|+|.+.|.+||+|||.|+.+..+....
T Consensus       106 ~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~--IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epni  183 (364)
T KOG0658|consen  106 ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG--ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNI  183 (364)
T ss_pred             HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC--cccCCCChheEEEcCCCCeEEeccCCcceeeccCCCce
Confidence            367777764    577999999999999999999999988  99999999999999998999999999999998888888


Q ss_pred             cccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcC------------------CCC
Q 010730           81 SVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSG------------------KLP  140 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g------------------~~p  140 (502)
                      +++.|..|.|||++-+  .|+.++||||.||++.||+-|++-|++.+..+|+...+.--                  ++|
T Consensus       184 SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p  263 (364)
T KOG0658|consen  184 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFP  263 (364)
T ss_pred             eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCc
Confidence            8999999999997754  59999999999999999999999999876666664433210                  111


Q ss_pred             ----Cc----ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCCC
Q 010730          141 ----GA----FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAG  182 (502)
Q Consensus       141 ----~~----~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~~  182 (502)
                          ..    +....++++-+|+.++|. +|.+|.++.|+|.||||.....
T Consensus       264 ~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~  314 (364)
T KOG0658|consen  264 QIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD  314 (364)
T ss_pred             ccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence                11    333458899999999999 9999999999999999975433


No 80 
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.97  E-value=7.1e-30  Score=258.19  Aligned_cols=175  Identities=29%  Similarity=0.409  Sum_probs=138.4

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC----Cc
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ----QA   79 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~----~~   79 (502)
                      +++|.+++.+.+.+++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||+++......    ..
T Consensus        87 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~-~~~kL~Dfg~~~~~~~~~~~~~~~  163 (338)
T cd07859          87 ESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTAN--VFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW  163 (338)
T ss_pred             CCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCC-CcEEEccCccccccccccCccccc
Confidence            6899999998889999999999999999999999998  9999999999999876 799999999997543211    12


Q ss_pred             ccccCCCcccCccccc---cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHH--------------HHHhhcC-----
Q 010730           80 HSVIGTPEFMAPELYE---EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQI--------------YKKVTSG-----  137 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~---~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql--------------~~kI~~g-----  137 (502)
                      ...+||+.|+|||++.   ..++.++|||||||++|+|++|++||.+.....++              ...+...     
T Consensus       164 ~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  243 (338)
T cd07859         164 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRY  243 (338)
T ss_pred             cCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHH
Confidence            3467999999999875   35899999999999999999999999764322211              1111100     


Q ss_pred             ------CCCCcc---cccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          138 ------KLPGAF---HRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       138 ------~~p~~~---~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                            ..+..+   ....++.+.++|.+||. +|.+|||++|+|.||||+...
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~  297 (338)
T cd07859         244 LSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA  297 (338)
T ss_pred             HHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcC
Confidence                  001000   11246788999999998 999999999999999997543


No 81 
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97  E-value=1e-29  Score=259.10  Aligned_cols=177  Identities=29%  Similarity=0.502  Sum_probs=142.5

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.+|+|.+++.+.+.+++..+..++.||+.||.|||+.+ +|+||||||+|||++.+ +.+||+|||++..+... ...
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-~ivH~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~-~~~  160 (331)
T cd06649          84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH-QIMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS-MAN  160 (331)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcC-CEEcCCCChhhEEEcCC-CcEEEccCccccccccc-ccc
Confidence            6789999999999888999999999999999999999752 29999999999999877 79999999999765432 234


Q ss_pred             cccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHh-------------------------
Q 010730           81 SVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKV-------------------------  134 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI-------------------------  134 (502)
                      ...||+.|+|||++.+ .++.++|||||||++|+|++|+.||... +..++...+                         
T Consensus       161 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (331)
T cd06649         161 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPP-DAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRP  239 (331)
T ss_pred             cCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHhcccccccccCCccccCccccccccc
Confidence            5679999999998864 5899999999999999999999999652 222222211                         


Q ss_pred             ---------------------hcCCCCCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          135 ---------------------TSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       135 ---------------------~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                                           .....+.......+.++++||.+||. ||.+|||+.|||+||||+...
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  308 (331)
T cd06649         240 VSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE  308 (331)
T ss_pred             ccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence                                 11111111122356789999999999 999999999999999997543


No 82 
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97  E-value=1.7e-30  Score=272.92  Aligned_cols=175  Identities=36%  Similarity=0.595  Sum_probs=157.4

Q ss_pred             CCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-
Q 010730            1 MFTSGTLREYRKKYT--RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~--~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-   77 (502)
                      |+.||+|.+.|++.+  .++++.+..|+.||+.||.|||+..  |+|||||+.|||++.+ +.|||+|||+|+.+.... 
T Consensus        85 Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~--iLHRDlK~~Nifltk~-~~VkLgDfGlaK~l~~~~~  161 (426)
T KOG0589|consen   85 YCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR--VLHRDLKCANIFLTKD-KKVKLGDFGLAKILNPEDS  161 (426)
T ss_pred             ecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh--hhcccchhhhhhcccc-CceeecchhhhhhcCCchh
Confidence            789999999997654  6999999999999999999999887  9999999999999987 678999999999987765 


Q ss_pred             CcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHH
Q 010730           78 QAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVG  156 (502)
Q Consensus        78 ~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~  156 (502)
                      ...+++|||.||+||++.+ .|+.++||||||||+|||++-+++|.. .+...+..+|..+... +.+...+.+++.+|.
T Consensus       162 ~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a-~~m~~Li~ki~~~~~~-Plp~~ys~el~~lv~  239 (426)
T KOG0589|consen  162 LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKA-SNMSELILKINRGLYS-PLPSMYSSELRSLVK  239 (426)
T ss_pred             hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCc-cchHHHHHHHhhccCC-CCCccccHHHHHHHH
Confidence            6788999999999999986 599999999999999999999999976 7788888888887753 455667889999999


Q ss_pred             Hhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          157 KCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       157 kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      .||. +|..||+|.+||.+|.++..
T Consensus       240 ~~l~~~P~~RPsa~~LL~~P~l~~~  264 (426)
T KOG0589|consen  240 SMLRKNPEHRPSALELLRRPHLLRY  264 (426)
T ss_pred             HHhhcCCccCCCHHHHhhChhhhhH
Confidence            9998 99999999999999888643


No 83 
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.97  E-value=9.2e-30  Score=252.63  Aligned_cols=179  Identities=26%  Similarity=0.470  Sum_probs=145.2

Q ss_pred             CCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC
Q 010730            1 MFTSGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k----~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~   76 (502)
                      |+.||+|.+++..    ...+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++..+...
T Consensus        74 ~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~~~  150 (280)
T cd05608          74 IMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR--IIYRDLKPENVLLDND-GNVRISDLGLAVELKDG  150 (280)
T ss_pred             CCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEEeeCccceecCCC
Confidence            6789999988843    356999999999999999999999998  9999999999999876 78999999999766443


Q ss_pred             C-CcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCC---hHHHHHHhhcCCCCCcccccccHHH
Q 010730           77 Q-QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSN---PAQIYKKVTSGKLPGAFHRIQDAEA  151 (502)
Q Consensus        77 ~-~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~---~~ql~~kI~~g~~p~~~~~~~s~~l  151 (502)
                      . ......||+.|+|||++. ..++.++|||||||++|+|++|..||.....   ...+...+.....  .++...+..+
T Consensus       151 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  228 (280)
T cd05608         151 QSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV--TYPDKFSPAS  228 (280)
T ss_pred             CccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC--CCcccCCHHH
Confidence            2 234467999999999886 4588999999999999999999999975332   2333444433322  3344567899


Q ss_pred             HHHHHHhhh-CcCCCC-----CHHHHhcCCCCcCCCCCC
Q 010730          152 RRFVGKCLE-NVSKRL-----PAKELLLDPFLASDAGEP  184 (502)
Q Consensus       152 ~~LI~kcL~-dP~kRp-----Sa~ELL~hPff~~~~~~~  184 (502)
                      ++++.+||. +|.+|+     ++++++.||||+...+..
T Consensus       229 ~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~  267 (280)
T cd05608         229 KSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQ  267 (280)
T ss_pred             HHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhH
Confidence            999999998 999999     899999999998754443


No 84 
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.96  E-value=1.2e-29  Score=250.54  Aligned_cols=170  Identities=31%  Similarity=0.461  Sum_probs=136.7

Q ss_pred             CCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCccc
Q 010730            4 SGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS   81 (502)
Q Consensus         4 gGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s   81 (502)
                      .++|.+++.+.  ..+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++...........
T Consensus        90 ~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~~-~~~kl~dfg~~~~~~~~~~~~~  166 (288)
T cd07863          90 DQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSG-GQVKLADFGLARIYSCQMALTP  166 (288)
T ss_pred             ccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC-CCEEECccCccccccCcccCCC
Confidence            46899999764  34899999999999999999999998  9999999999999876 7999999999987654444455


Q ss_pred             ccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcC-------CCCC------------
Q 010730           82 VIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSG-------KLPG------------  141 (502)
Q Consensus        82 ~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g-------~~p~------------  141 (502)
                      ..||+.|+|||++. ..++.++|||||||++|+|++|.+||........ +.++...       .++.            
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (288)
T cd07863         167 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ-LGKIFDLIGLPPEDDWPRDVTLPRGAFSPR  245 (288)
T ss_pred             ccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH-HHHHHHHhCCCChhhCcccccccccccCCC
Confidence            78999999999875 4589999999999999999999999976433332 2222110       0000            


Q ss_pred             ------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          142 ------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       142 ------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                            ......+..++++|.+||. ||.+|||+.|+|.||||
T Consensus       246 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         246 GPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             CCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                  0111246678999999999 99999999999999998


No 85 
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.96  E-value=1.4e-29  Score=258.21  Aligned_cols=178  Identities=22%  Similarity=0.416  Sum_probs=145.3

Q ss_pred             CCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC-
Q 010730            1 MFTSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~-   78 (502)
                      |+.+|+|.+++.+ ...+++..++.|+.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||++..+..... 
T Consensus        82 y~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~--iiHrDlkp~Nili~~~-~~~kL~DfG~a~~~~~~~~~  158 (332)
T cd05623          82 YYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMN-GHIRLADFGSCLKLMEDGTV  158 (332)
T ss_pred             ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECCC-CCEEEeecchheecccCCcc
Confidence            6789999999987 467999999999999999999999998  9999999999999876 7999999999976533222 


Q ss_pred             -cccccCCCcccCccccc------cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCccc---cccc
Q 010730           79 -AHSVIGTPEFMAPELYE------EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFH---RIQD  148 (502)
Q Consensus        79 -~~s~vGTp~Y~APEvl~------~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~---~~~s  148 (502)
                       ....+||+.|+|||++.      ..++.++|||||||++|+|++|..||.. .+..+.+.++........++   ...+
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~~s  237 (332)
T cd05623         159 QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA-ESLVETYGKIMNHKERFQFPAQVTDVS  237 (332)
T ss_pred             eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC-CCHHHHHHHHhCCCccccCCCccccCC
Confidence             23357999999999874      3488999999999999999999999976 55666777776544221222   2357


Q ss_pred             HHHHHHHHHhhh---CcCCCCCHHHHhcCCCCcCCCC
Q 010730          149 AEARRFVGKCLE---NVSKRLPAKELLLDPFLASDAG  182 (502)
Q Consensus       149 ~~l~~LI~kcL~---dP~kRpSa~ELL~hPff~~~~~  182 (502)
                      .++++||.+||.   ++..|+++.|+++||||....+
T Consensus       238 ~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~~  274 (332)
T cd05623         238 EDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGIDW  274 (332)
T ss_pred             HHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCCH
Confidence            899999999996   3344789999999999986544


No 86 
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.96  E-value=1.1e-29  Score=254.45  Aligned_cols=174  Identities=23%  Similarity=0.389  Sum_probs=137.1

Q ss_pred             CCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CCccc
Q 010730            4 SGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQAHS   81 (502)
Q Consensus         4 gGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~~~s   81 (502)
                      +|+|.+++.+. +.+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||++...... .....
T Consensus        86 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~~~~~~  162 (303)
T cd07869          86 HTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY--ILHRDLKPQNLLISDT-GELKLADFGLARAKSVPSHTYSN  162 (303)
T ss_pred             CcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEECCCCcceeccCCCccCCC
Confidence            57888888764 57999999999999999999999998  9999999999999876 79999999998754322 22345


Q ss_pred             ccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc--CCC---------------CCc
Q 010730           82 VIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS--GKL---------------PGA  142 (502)
Q Consensus        82 ~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~--g~~---------------p~~  142 (502)
                      .+||+.|+|||++.+  .++.++|||||||++|+|++|..||.+..+.....+.+..  +..               +..
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (303)
T cd07869         163 EVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPER  242 (303)
T ss_pred             CcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccccc
Confidence            678999999998754  4788999999999999999999999875554433332211  000               000


Q ss_pred             c------------c-ccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          143 F------------H-RIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       143 ~------------~-~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      +            . ...+..+++||.+||. ||.+|+|+.|+|.||||+..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~  294 (303)
T cd07869         243 FTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL  294 (303)
T ss_pred             ccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence            0            0 0123578999999999 99999999999999999754


No 87 
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.96  E-value=1.1e-29  Score=253.12  Aligned_cols=170  Identities=22%  Similarity=0.423  Sum_probs=134.9

Q ss_pred             CCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CCccc
Q 010730            4 SGTLREYRKKYT-RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQAHS   81 (502)
Q Consensus         4 gGsL~~yi~k~~-~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~~~s   81 (502)
                      .|+|.+++...+ .+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++..... .....
T Consensus        86 ~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~~-~~~kl~DfG~~~~~~~~~~~~~~  162 (288)
T cd07871          86 DSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK--ILHRDLKPQNLLINEK-GELKLADFGLARAKSVPTKTYSN  162 (288)
T ss_pred             CcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCC-CCEEECcCcceeeccCCCccccC
Confidence            469999997654 5899999999999999999999998  9999999999999876 79999999999765432 22344


Q ss_pred             ccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc--CC-------------------
Q 010730           82 VIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS--GK-------------------  138 (502)
Q Consensus        82 ~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~--g~-------------------  138 (502)
                      ..||+.|+|||++.+  .++.++|||||||++|+|+||.+||.+...... ...+..  +.                   
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (288)
T cd07871         163 EVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE-LHLIFRLLGTPTEETWPGITSNEEFRSYL  241 (288)
T ss_pred             ceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChHHhhccccchhhhccc
Confidence            678999999998753  489999999999999999999999976433322 222211  00                   


Q ss_pred             CCC-------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          139 LPG-------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       139 ~p~-------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      ++.       ......+.++++||.+||. ||.+|||++|+|+||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         242 FPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             cCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            000       0011246789999999999 99999999999999997


No 88 
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.96  E-value=2e-29  Score=262.20  Aligned_cols=176  Identities=22%  Similarity=0.421  Sum_probs=146.0

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC--C
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ--Q   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~--~   78 (502)
                      |+.||+|.+++++. .+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||++..+....  .
T Consensus       124 y~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NIll~~~-~~ikL~DfG~a~~~~~~~~~~  199 (371)
T cd05622         124 YMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVR  199 (371)
T ss_pred             CCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHEEECCC-CCEEEEeCCceeEcCcCCccc
Confidence            57899999999764 5899999999999999999999998  9999999999999876 799999999998764332  2


Q ss_pred             cccccCCCcccCcccccc-----CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCc--ccccccHHH
Q 010730           79 AHSVIGTPEFMAPELYEE-----DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGA--FHRIQDAEA  151 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~-----~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~--~~~~~s~~l  151 (502)
                      ....+||+.|+|||++..     .++.++|||||||++|+|++|..||.. .+....+.++........  .....+..+
T Consensus       200 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  278 (371)
T cd05622         200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTYSKIMNHKNSLTFPDDNDISKEA  278 (371)
T ss_pred             ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCCcccCCCcCCCCHHH
Confidence            245689999999998853     278899999999999999999999976 566777888776542222  223467899


Q ss_pred             HHHHHHhhhCcCC---CCCHHHHhcCCCCcCCC
Q 010730          152 RRFVGKCLENVSK---RLPAKELLLDPFLASDA  181 (502)
Q Consensus       152 ~~LI~kcL~dP~k---RpSa~ELL~hPff~~~~  181 (502)
                      +++|.+||.+|.+   |+++.++++||||+...
T Consensus       279 ~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~  311 (371)
T cd05622         279 KNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ  311 (371)
T ss_pred             HHHHHHHcCChhhhcCCCCHHHHhcCcccCCCC
Confidence            9999999985433   78999999999997654


No 89 
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.96  E-value=1.3e-29  Score=257.04  Aligned_cols=175  Identities=29%  Similarity=0.496  Sum_probs=143.7

Q ss_pred             CCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CC
Q 010730            4 SGTLREYRKKYT----RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQ   78 (502)
Q Consensus         4 gGsL~~yi~k~~----~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~   78 (502)
                      .-+|.+|+...+    .++...++.+++||+.||+|||+++  |+||||||+|||++.. |.+||+|||+|+...-. ..
T Consensus       100 d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~--IlHRDLKPQNlLi~~~-G~lKlaDFGlAra~~ip~~~  176 (323)
T KOG0594|consen  100 DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG--ILHRDLKPQNLLISSS-GVLKLADFGLARAFSIPMRT  176 (323)
T ss_pred             cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCcceEEECCC-CcEeeeccchHHHhcCCccc
Confidence            457889998765    5888999999999999999999999  9999999999999986 89999999999876533 33


Q ss_pred             cccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCC---------------C
Q 010730           79 AHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLP---------------G  141 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p---------------~  141 (502)
                      ....++|.+|.|||++-+  .|+..+||||+|||++||+++++-|++..+.+++.+...--..|               .
T Consensus       177 yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~  256 (323)
T KOG0594|consen  177 YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKA  256 (323)
T ss_pred             ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccc
Confidence            566889999999998754  49999999999999999999999999877777765544321111               0


Q ss_pred             cccc------------cccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          142 AFHR------------IQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       142 ~~~~------------~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                      .++.            ..++...+++.+||. +|.+|.||+.+|.||||....
T Consensus       257 ~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~  309 (323)
T KOG0594|consen  257 PFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP  309 (323)
T ss_pred             cCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence            0100            113578999999999 999999999999999997653


No 90 
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96  E-value=1.3e-29  Score=265.91  Aligned_cols=171  Identities=26%  Similarity=0.364  Sum_probs=140.0

Q ss_pred             cHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC--Ccccc
Q 010730            6 TLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ--QAHSV   82 (502)
Q Consensus         6 sL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~--~~~s~   82 (502)
                      +|.-++.. .-.|++.+|+.|++||+.||+|||++|  |+|||||++|||+|.+ |.+||+|||||+++....  .++..
T Consensus       203 DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~g--vlHRDIK~SNiLidn~-G~LKiaDFGLAr~y~~~~~~~~T~r  279 (560)
T KOG0600|consen  203 DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRG--VLHRDIKGSNILIDNN-GVLKIADFGLARFYTPSGSAPYTSR  279 (560)
T ss_pred             hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcC--eeeccccccceEEcCC-CCEEeccccceeeccCCCCcccccc
Confidence            45555544 236999999999999999999999999  9999999999999987 899999999999775443  46778


Q ss_pred             cCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCC--Cccc--------------
Q 010730           83 IGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLP--GAFH--------------  144 (502)
Q Consensus        83 vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p--~~~~--------------  144 (502)
                      +-|.+|.|||++.|  .|+.++|+||+||||.||++|++.|.+....+|+-+...-+--|  ..|+              
T Consensus       280 VvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~  359 (560)
T KOG0600|consen  280 VVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQ  359 (560)
T ss_pred             eEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCC
Confidence            89999999998764  59999999999999999999999999977777764433221111  0011              


Q ss_pred             ----------ccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          145 ----------RIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       145 ----------~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                                ...++.+.+|+..||. ||.+|.||.++|+++||..
T Consensus       360 ~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t  405 (560)
T KOG0600|consen  360 PYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT  405 (560)
T ss_pred             cccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence                      1236778899999999 9999999999999999943


No 91 
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.96  E-value=2.4e-29  Score=253.33  Aligned_cols=188  Identities=26%  Similarity=0.371  Sum_probs=151.6

Q ss_pred             CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CCcccc
Q 010730            5 GTLREYRKKYT-RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQAHSV   82 (502)
Q Consensus         5 GsL~~yi~k~~-~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~~~s~   82 (502)
                      -+|+..+.+-+ ++...+++.++.|+|.||+|||.+.  |+|||||++|+|++.. |.+||+|||+|+.+... ...+..
T Consensus       161 hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~w--ilHRDLK~SNLLm~~~-G~lKiaDFGLAR~ygsp~k~~T~l  237 (419)
T KOG0663|consen  161 HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNW--ILHRDLKTSNLLLSHK-GILKIADFGLAREYGSPLKPYTPL  237 (419)
T ss_pred             hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhce--eEecccchhheeeccC-CcEEecccchhhhhcCCcccCcce
Confidence            46778887654 8999999999999999999999999  9999999999999876 89999999999988654 345667


Q ss_pred             cCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCC--------------------
Q 010730           83 IGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLP--------------------  140 (502)
Q Consensus        83 vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p--------------------  140 (502)
                      +-|.+|.|||++.+  .|++++|+||+|||+.||+++.+.|++....+|+.+.+.---.|                    
T Consensus       238 VVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~  317 (419)
T KOG0663|consen  238 VVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFS  317 (419)
T ss_pred             EEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccC
Confidence            88999999998754  49999999999999999999999999988888876654321111                    


Q ss_pred             --------Cccccc-ccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCCC--CCCCCCCCCCccC
Q 010730          141 --------GAFHRI-QDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAG--EPLLIPQVPSFQN  195 (502)
Q Consensus       141 --------~~~~~~-~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~~--~~l~~p~~p~~~~  195 (502)
                              ..|... .+....+|+..+|. ||.+|.||.|.|+|.||...+.  .+-..|++|....
T Consensus       318 ~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~~~Pt~P~k~~  384 (419)
T KOG0663|consen  318 EHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPSMFPTWPAKSE  384 (419)
T ss_pred             CCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCChhhcCCCccccc
Confidence                    011112 35778899999998 9999999999999999986433  2333555555443


No 92 
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.96  E-value=4.6e-29  Score=242.43  Aligned_cols=173  Identities=32%  Similarity=0.573  Sum_probs=144.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC--
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ--   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~--   78 (502)
                      |+.||+|.+++.+.+.+++..++.++.||+.||.|||..+  |+||||||+||+++.+ +.++|+|||+++.......  
T Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nilv~~~-~~~~l~dfg~~~~~~~~~~~~  161 (263)
T cd06625          85 YMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNM--IVHRDIKGANILRDSA-GNVKLGDFGASKRLQTICSSG  161 (263)
T ss_pred             ECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCC-CCEEEeecccceecccccccc
Confidence            4679999999999889999999999999999999999998  9999999999999876 7999999999976543211  


Q ss_pred             --cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHH
Q 010730           79 --AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFV  155 (502)
Q Consensus        79 --~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI  155 (502)
                        .....|++.|+|||++.+ .++.++|||||||++|+|++|..||.......... .+........++...+..++++|
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li  240 (263)
T cd06625         162 TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIF-KIATQPTNPQLPSHVSPDARNFL  240 (263)
T ss_pred             ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHH-HHhccCCCCCCCccCCHHHHHHH
Confidence              133568899999998864 48899999999999999999999997754444444 33333333345556788999999


Q ss_pred             HHhhh-CcCCCCCHHHHhcCCCC
Q 010730          156 GKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      .+||. +|.+|||+.++|+||||
T Consensus       241 ~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         241 RRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHHhhcCcccCCCHHHHhhCCCC
Confidence            99998 99999999999999997


No 93 
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.96  E-value=4.4e-29  Score=254.68  Aligned_cols=178  Identities=22%  Similarity=0.397  Sum_probs=143.7

Q ss_pred             CCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.||+|.+++.+ ...+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||++..+......
T Consensus        82 ~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~~~  158 (331)
T cd05597          82 YYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG--YVHRDIKPDNVLLDKN-GHIRLADFGSCLRLLADGTV  158 (331)
T ss_pred             cCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEECCCCHHHEEECCC-CCEEEEECCceeecCCCCCc
Confidence            6789999999987 467999999999999999999999998  9999999999999876 79999999999765433222


Q ss_pred             --ccccCCCcccCccccc------cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCC---ccccccc
Q 010730           80 --HSVIGTPEFMAPELYE------EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPG---AFHRIQD  148 (502)
Q Consensus        80 --~s~vGTp~Y~APEvl~------~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~---~~~~~~s  148 (502)
                        ...+||+.|+|||++.      +.++.++|||||||++|+|++|..||.. .+..+.+.++.......   ......+
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~  237 (331)
T cd05597         159 QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA-ESLVETYGKIMNHKEHFQFPPDVTDVS  237 (331)
T ss_pred             cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC-CCHHHHHHHHHcCCCcccCCCccCCCC
Confidence              2356999999999885      3478899999999999999999999976 45566666665432211   1122357


Q ss_pred             HHHHHHHHHhhh---CcCCCCCHHHHhcCCCCcCCCC
Q 010730          149 AEARRFVGKCLE---NVSKRLPAKELLLDPFLASDAG  182 (502)
Q Consensus       149 ~~l~~LI~kcL~---dP~kRpSa~ELL~hPff~~~~~  182 (502)
                      ..+++||.+||.   ++..|+++.++|.||||....+
T Consensus       238 ~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~  274 (331)
T cd05597         238 EEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGIDW  274 (331)
T ss_pred             HHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCCH
Confidence            889999999986   3344789999999999976544


No 94 
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.96  E-value=3e-29  Score=252.22  Aligned_cols=173  Identities=31%  Similarity=0.435  Sum_probs=130.9

Q ss_pred             CCCcHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeC---CCCcEEEEecCCc
Q 010730            3 TSGTLREYRKKY---------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNG---HLGQIKIGDLGLA   70 (502)
Q Consensus         3 tgGsL~~yi~k~---------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~---~~g~vKL~DFGlA   70 (502)
                      .+++|.+++...         ..+++..++.++.||+.||+|||+++  |+||||||+|||+..   ..+.+||+|||++
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          82 AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             cCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence            467888887632         25899999999999999999999998  999999999999942   2368999999999


Q ss_pred             eeccCCC----CcccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCCh---------HHHHHHhh
Q 010730           71 AILRGSQ----QAHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNP---------AQIYKKVT  135 (502)
Q Consensus        71 ~~~~~~~----~~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~---------~ql~~kI~  135 (502)
                      ..+....    .....+||+.|+|||++.+  .|+.++||||+||++|+|++|.+||......         .++.+.+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~  239 (317)
T cd07868         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN  239 (317)
T ss_pred             eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHH
Confidence            8764321    2345689999999998754  4889999999999999999999999643210         11111100


Q ss_pred             cCCCC------------C-----------------------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          136 SGKLP------------G-----------------------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       136 ~g~~p------------~-----------------------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      ....|            .                       ......+..+.+||.+||. ||.+|+|++|+|+||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         240 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             hcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            00000            0                       0011134578899999999 99999999999999997


No 95 
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.96  E-value=1.3e-29  Score=259.82  Aligned_cols=174  Identities=21%  Similarity=0.420  Sum_probs=158.1

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |..+|.|.+|+...+.|++.+++.+++||++|+.|||.++  |+|||||.+|||++.| +.+||+||||+..+.....+.
T Consensus       134 YaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknr--VvHRDLKLENILLD~N-~NiKIADFGLSNly~~~kfLq  210 (668)
T KOG0611|consen  134 YASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNR--VVHRDLKLENILLDQN-NNIKIADFGLSNLYADKKFLQ  210 (668)
T ss_pred             ecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhcc--ceecccchhheeecCC-CCeeeeccchhhhhccccHHH
Confidence            6789999999999999999999999999999999999999  9999999999999998 799999999999998888899


Q ss_pred             cccCCCcccCccccccC--CCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           81 SVIGTPEFMAPELYEED--YNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~~--ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ++||+|-|.+||++.+.  -++.+|.|||||+||.|+.|..||.+ .+-..+.++|..|.+..+.   .+..+.-||+-|
T Consensus       211 TFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG-~Dhk~lvrQIs~GaYrEP~---~PSdA~gLIRwm  286 (668)
T KOG0611|consen  211 TFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDG-RDHKRLVRQISRGAYREPE---TPSDASGLIRWM  286 (668)
T ss_pred             HhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCC-chHHHHHHHhhcccccCCC---CCchHHHHHHHH
Confidence            99999999999999875  47899999999999999999999977 6667888899998874332   345789999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          159 LE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                      |. ||.+|.|+.++..|=|+.-+.
T Consensus       287 LmVNP~RRATieDiAsHWWvNwgy  310 (668)
T KOG0611|consen  287 LMVNPERRATIEDIASHWWVNWGY  310 (668)
T ss_pred             HhcCcccchhHHHHhhhheeeccc
Confidence            97 999999999999998886443


No 96 
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=6.7e-30  Score=267.60  Aligned_cols=180  Identities=25%  Similarity=0.432  Sum_probs=167.1

Q ss_pred             CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCccc
Q 010730            2 FTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS   81 (502)
Q Consensus         2 ~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s   81 (502)
                      +-||.|...+++.+.++...++.++..+++|++|||++|  ||.|||||+|++++.+ |.+||.|||+|+.+..+.+..+
T Consensus       502 ClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~--iIYRDLKPENllLd~~-Gy~KLVDFGFAKki~~g~KTwT  578 (732)
T KOG0614|consen  502 CLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKG--IIYRDLKPENLLLDNR-GYLKLVDFGFAKKIGSGRKTWT  578 (732)
T ss_pred             hcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcC--ceeccCChhheeeccC-CceEEeehhhHHHhccCCceee
Confidence            469999999999999999999999999999999999999  9999999999999987 8999999999999999999999


Q ss_pred             ccCCCcccCcccc-ccCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhhh
Q 010730           82 VIGTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE  160 (502)
Q Consensus        82 ~vGTp~Y~APEvl-~~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~  160 (502)
                      +||||.|+|||++ ...-+.++|.||||+++||||+|.+||++ .++-..|..|..|.-...++..+...+.++|.++..
T Consensus       579 FcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~-~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr  657 (732)
T KOG0614|consen  579 FCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSG-VDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCR  657 (732)
T ss_pred             ecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCC-CchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHh
Confidence            9999999999965 56689999999999999999999999987 788999999999987777888888999999999887


Q ss_pred             -CcCCCCC-----HHHHhcCCCCcCCCCCCC
Q 010730          161 -NVSKRLP-----AKELLLDPFLASDAGEPL  185 (502)
Q Consensus       161 -dP~kRpS-----a~ELL~hPff~~~~~~~l  185 (502)
                       +|.+|+.     +.+|-+|.||.+.+|.-+
T Consensus       658 ~~P~ERLG~~~~gI~DIkkH~Wf~gfdwegl  688 (732)
T KOG0614|consen  658 DNPTERLGYQKGGINDIKKHRWFEGFDWEGL  688 (732)
T ss_pred             cCcHhhhccccCChHHHHhhhhhhcCChhhh
Confidence             9999987     899999999998887654


No 97 
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96  E-value=3.4e-29  Score=257.72  Aligned_cols=171  Identities=27%  Similarity=0.389  Sum_probs=135.0

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCccccc
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVI   83 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~v   83 (502)
                      +|+|.+++..  .+++..+..++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||+++............
T Consensus       109 ~~~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~--ivHrDlkp~NIl~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~  183 (359)
T cd07876         109 DANLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTACTNFMMTPYV  183 (359)
T ss_pred             CcCHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCC-CCEEEecCCCccccccCccCCCCc
Confidence            4667777643  5889999999999999999999998  9999999999999887 799999999997655444445678


Q ss_pred             CCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhh---------------------cC--CC
Q 010730           84 GTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVT---------------------SG--KL  139 (502)
Q Consensus        84 GTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~---------------------~g--~~  139 (502)
                      ||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+...+.                     ..  ..
T Consensus       184 ~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (359)
T cd07876         184 VTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQY  263 (359)
T ss_pred             ccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCC
Confidence            9999999998864 589999999999999999999999986443222211110                     00  00


Q ss_pred             C---------C-------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          140 P---------G-------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       140 p---------~-------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                      +         .       ......+..+++||.+||. ||.+|||+.|+|+||||..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         264 PGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             CCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence            0         0       0112235678999999999 9999999999999999964


No 98 
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96  E-value=5.1e-29  Score=256.81  Aligned_cols=170  Identities=29%  Similarity=0.421  Sum_probs=136.0

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCccccc
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVI   83 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~v   83 (502)
                      +++|.+++..  .+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++...........+
T Consensus       112 ~~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~-~~~kL~DfG~a~~~~~~~~~~~~~  186 (364)
T cd07875         112 DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYV  186 (364)
T ss_pred             CCCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEECCC-CcEEEEeCCCccccCCCCcccCCc
Confidence            4678888754  5889999999999999999999998  9999999999999877 799999999998765544445678


Q ss_pred             CCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcC-CC--------------------C-
Q 010730           84 GTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSG-KL--------------------P-  140 (502)
Q Consensus        84 GTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g-~~--------------------p-  140 (502)
                      ||+.|+|||++.+ .++.++|||||||++|+|++|..||.+... ...+.++... ..                    | 
T Consensus       187 ~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (364)
T cd07875         187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK  265 (364)
T ss_pred             ccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCC
Confidence            9999999998764 589999999999999999999999976433 3333332210 00                    0 


Q ss_pred             ------------------CcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          141 ------------------GAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       141 ------------------~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                                        .......+..+++||.+||. ||.+|||+.|+|+||||..
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             cCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence                              00111234678999999999 9999999999999999963


No 99 
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.96  E-value=3.5e-29  Score=245.92  Aligned_cols=171  Identities=27%  Similarity=0.409  Sum_probs=140.1

Q ss_pred             cHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc-cccc
Q 010730            6 TLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA-HSVI   83 (502)
Q Consensus         6 sL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~-~s~v   83 (502)
                      +|...|+. ...+....++.|+.++++||+|||.+.  |+||||||.|+|++.+ |.+||+|||+|+.+...... ...+
T Consensus        86 dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~--IlHRDlKPnNLLis~~-g~lKiADFGLAr~f~~p~~~~~~~V  162 (318)
T KOG0659|consen   86 DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW--ILHRDLKPNNLLISSD-GQLKIADFGLARFFGSPNRIQTHQV  162 (318)
T ss_pred             cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh--hhcccCCccceEEcCC-CcEEeecccchhccCCCCcccccce
Confidence            67777754 456999999999999999999999999  9999999999999987 89999999999987644332 2347


Q ss_pred             CCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC--CCccc---------------
Q 010730           84 GTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL--PGAFH---------------  144 (502)
Q Consensus        84 GTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~--p~~~~---------------  144 (502)
                      -|.+|.|||++-|  .|+..+||||+|||+.||+-|.+-|++.++.+|+-..+..--.  +..|+               
T Consensus       163 ~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P  242 (318)
T KOG0659|consen  163 VTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFP  242 (318)
T ss_pred             eeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCC
Confidence            8999999997754  5999999999999999999999889988888887544332111  11111               


Q ss_pred             --------ccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          145 --------RIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       145 --------~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                              ...+.++-+|+.+||. ||.+|++|.|+|+|+||..
T Consensus       243 ~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~  286 (318)
T KOG0659|consen  243 KPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS  286 (318)
T ss_pred             CCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence                    1235677999999999 9999999999999999986


No 100
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96  E-value=4.4e-29  Score=247.96  Aligned_cols=178  Identities=25%  Similarity=0.436  Sum_probs=145.0

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.+|+|.+++.+.+.+++..+..++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++...... ...
T Consensus        78 ~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dikp~Nil~~~~-~~~~l~dfg~~~~~~~~-~~~  153 (279)
T cd05633          78 LMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRF--VVYRDLKPANILLDEH-GHVRISDLGLACDFSKK-KPH  153 (279)
T ss_pred             cCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cCCCCCCHHHEEECCC-CCEEEccCCcceecccc-Ccc
Confidence            6789999999998889999999999999999999999998  9999999999999876 79999999998765432 223


Q ss_pred             cccCCCcccCccccc--cCCCCcccchhHHHHHHHHhhccCCCCCCC--ChHHHHHHhhcCCCCCcccccccHHHHHHHH
Q 010730           81 SVIGTPEFMAPELYE--EDYNELVDIYSFGMCVLEMLTSEYPYSECS--NPAQIYKKVTSGKLPGAFHRIQDAEARRFVG  156 (502)
Q Consensus        81 s~vGTp~Y~APEvl~--~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~--~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~  156 (502)
                      ...||+.|+|||++.  ..++.++|||||||++|+|++|..||....  ....+.....  ..+..++...+.+++++|.
T Consensus       154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~  231 (279)
T cd05633         154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL--TVNVELPDSFSPELKSLLE  231 (279)
T ss_pred             CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh--cCCcCCccccCHHHHHHHH
Confidence            457999999999875  347899999999999999999999996532  2222222211  1222344456789999999


Q ss_pred             Hhhh-CcCCCC-----CHHHHhcCCCCcCCCCCC
Q 010730          157 KCLE-NVSKRL-----PAKELLLDPFLASDAGEP  184 (502)
Q Consensus       157 kcL~-dP~kRp-----Sa~ELL~hPff~~~~~~~  184 (502)
                      +||. +|.+|+     +++|+++||||+......
T Consensus       232 ~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~  265 (279)
T cd05633         232 GLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQ  265 (279)
T ss_pred             HHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhH
Confidence            9998 999999     699999999998755433


No 101
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.96  E-value=4.8e-29  Score=247.09  Aligned_cols=178  Identities=23%  Similarity=0.414  Sum_probs=144.9

Q ss_pred             CCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKYT--RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~--~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.||+|.+++...+  .+++..+..++.||+.||+|||+.+  |+||||||+||+++.+ +.+||+|||++........
T Consensus        74 ~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~~-~~~~l~Dfg~~~~~~~~~~  150 (277)
T cd05607          74 LMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD--IVYRDMKPENVLLDDQ-GNCRLSDLGLAVELKDGKT  150 (277)
T ss_pred             cCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC--EEEccCChHhEEEcCC-CCEEEeeceeeeecCCCce
Confidence            578999999986543  5899999999999999999999998  9999999999999876 7899999999987655444


Q ss_pred             cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCC---ChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECS---NPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~---~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      .....||+.|+|||++. ..++.++|||||||++|+|++|..||....   +..++.+.+.....+.. ....+.+++++
T Consensus       151 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l  229 (277)
T cd05607         151 ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFE-HQNFTEESKDI  229 (277)
T ss_pred             eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccc-cccCCHHHHHH
Confidence            44567999999999875 458999999999999999999999997532   23344455444443322 22457889999


Q ss_pred             HHHhhh-CcCCCCCH----HHHhcCCCCcCCCC
Q 010730          155 VGKCLE-NVSKRLPA----KELLLDPFLASDAG  182 (502)
Q Consensus       155 I~kcL~-dP~kRpSa----~ELL~hPff~~~~~  182 (502)
                      |.+||. +|.+||++    ++++.||||+...+
T Consensus       230 i~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~  262 (277)
T cd05607         230 CRLFLAKKPEDRLGSREKNDDPRKHEFFKTINF  262 (277)
T ss_pred             HHHHhccCHhhCCCCccchhhhhcChhhcCCCH
Confidence            999998 99999999    67889999986543


No 102
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.96  E-value=6e-29  Score=242.28  Aligned_cols=179  Identities=27%  Similarity=0.466  Sum_probs=152.1

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.+|+|.+++.+...+++..+..++.||+.||.|||+++  ++|+||||+||+++.+ +.+||+|||++..........
T Consensus        74 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--~~h~dl~~~nilv~~~-~~~~l~df~~~~~~~~~~~~~  150 (262)
T cd05572          74 YCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRG--IIYRDLKPENLLLDSN-GYVKLVDFGFAKKLKSGQKTW  150 (262)
T ss_pred             cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEEcCC-CCEEEeeCCcccccCcccccc
Confidence            5679999999998888999999999999999999999988  9999999999999886 799999999998775543344


Q ss_pred             cccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCC-ChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           81 SVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECS-NPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        81 s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~-~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ...|++.|+|||++. ..++.++|+||||+++|+|++|..||.... +..++++++..+.....++...+..++++|.+|
T Consensus       151 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  230 (262)
T cd05572         151 TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQL  230 (262)
T ss_pred             cccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHH
Confidence            567899999999875 458899999999999999999999997643 356677777654433344444578999999999


Q ss_pred             hh-CcCCCCC-----HHHHhcCCCCcCCCC
Q 010730          159 LE-NVSKRLP-----AKELLLDPFLASDAG  182 (502)
Q Consensus       159 L~-dP~kRpS-----a~ELL~hPff~~~~~  182 (502)
                      |. +|.+|++     ++|+++||||+...+
T Consensus       231 l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~  260 (262)
T cd05572         231 LRRNPEERLGNLKGGIKDIKKHKWFNGFDW  260 (262)
T ss_pred             ccCChhhCcCCcccCHHHHhcChhhhCCCC
Confidence            98 9999999     999999999986543


No 103
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.96  E-value=4.8e-29  Score=255.87  Aligned_cols=171  Identities=29%  Similarity=0.402  Sum_probs=134.9

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCccccc
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVI   83 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~v   83 (502)
                      .|+|.+++..  .+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++...........+
T Consensus       105 ~~~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDikp~Nill~~~-~~~kl~Dfg~~~~~~~~~~~~~~~  179 (355)
T cd07874         105 DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYV  179 (355)
T ss_pred             cccHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEECCC-CCEEEeeCcccccCCCccccCCcc
Confidence            4567777754  5889999999999999999999998  9999999999999876 799999999998765544455678


Q ss_pred             CCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc---------------------C----
Q 010730           84 GTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS---------------------G----  137 (502)
Q Consensus        84 GTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~---------------------g----  137 (502)
                      ||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+...+..                     .    
T Consensus       180 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (355)
T cd07874         180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY  259 (355)
T ss_pred             ccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCcc
Confidence            9999999998764 5899999999999999999999999764322222111110                     0    


Q ss_pred             ---CCC-----------CcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          138 ---KLP-----------GAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       138 ---~~p-----------~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                         .++           .......+..+++||.+||. ||.+|||+.|+|+||||..
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~  316 (355)
T cd07874         260 AGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINV  316 (355)
T ss_pred             ccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhc
Confidence               000           00112235678999999999 9999999999999999964


No 104
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.96  E-value=5.7e-29  Score=253.88  Aligned_cols=179  Identities=21%  Similarity=0.415  Sum_probs=145.0

Q ss_pred             CCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.||+|.+++.+ .+.+++..++.|+.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||++..+......
T Consensus        82 y~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~--iiHrDlkp~Nill~~~-~~~kl~DfG~a~~~~~~~~~  158 (331)
T cd05624          82 YYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH--YVHRDIKPDNVLLDMN-GHIRLADFGSCLKMNQDGTV  158 (331)
T ss_pred             CCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCchHHEEEcCC-CCEEEEeccceeeccCCCce
Confidence            6789999999987 467999999999999999999999998  9999999999999876 79999999999876443222


Q ss_pred             --ccccCCCcccCcccccc------CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCccc---cccc
Q 010730           80 --HSVIGTPEFMAPELYEE------DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFH---RIQD  148 (502)
Q Consensus        80 --~s~vGTp~Y~APEvl~~------~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~---~~~s  148 (502)
                        ...+||+.|+|||++.+      .++.++|||||||++|+|++|..||.. .+..+.+.++........++   ...+
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~~~  237 (331)
T cd05624         159 QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA-ESLVETYGKIMNHEERFQFPSHITDVS  237 (331)
T ss_pred             eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC-CCHHHHHHHHHcCCCcccCCCccccCC
Confidence              23579999999998753      478899999999999999999999976 45566677766543211121   2247


Q ss_pred             HHHHHHHHHhhhCcCC---CCCHHHHhcCCCCcCCCCC
Q 010730          149 AEARRFVGKCLENVSK---RLPAKELLLDPFLASDAGE  183 (502)
Q Consensus       149 ~~l~~LI~kcL~dP~k---RpSa~ELL~hPff~~~~~~  183 (502)
                      .+++++|.+||..+.+   |+++++++.||||+...+.
T Consensus       238 ~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~~~  275 (331)
T cd05624         238 EEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGIDWE  275 (331)
T ss_pred             HHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCCHH
Confidence            8999999999983333   5689999999999865443


No 105
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.96  E-value=4.4e-29  Score=270.17  Aligned_cols=174  Identities=25%  Similarity=0.452  Sum_probs=149.6

Q ss_pred             CCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC
Q 010730            1 MFTSGTLREYRKKY----TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k~----~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~   76 (502)
                      |+.+|+|.+++...    ..+++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||+++.+...
T Consensus       120 y~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~--IiHrDLKP~NILl~~~-~~vkL~DFGls~~~~~~  196 (496)
T PTZ00283        120 YANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH--MIHRDIKSANILLCSN-GLVKLGDFGFSKMYAAT  196 (496)
T ss_pred             CCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEeCC-CCEEEEecccCeecccc
Confidence            67899999999653    46999999999999999999999998  9999999999999987 79999999999865432


Q ss_pred             ---CCcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHH
Q 010730           77 ---QQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEAR  152 (502)
Q Consensus        77 ---~~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~  152 (502)
                         ......+||+.|+|||++.+ .|+.++|||||||++|+|++|..||.. .+...++.++..+..+ .++...+++++
T Consensus       197 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~-~~~~~~~~~~~~~~~~-~~~~~~~~~l~  274 (496)
T PTZ00283        197 VSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDG-ENMEEVMHKTLAGRYD-PLPPSISPEMQ  274 (496)
T ss_pred             ccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHhcCCCC-CCCCCCCHHHH
Confidence               22345789999999998865 589999999999999999999999976 5667777777776654 34455678999


Q ss_pred             HHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          153 RFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       153 ~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                      ++|.+||. +|.+||++.++|.|||++.
T Consensus       275 ~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        275 EIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             HHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence            99999998 9999999999999999864


No 106
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.96  E-value=5.1e-29  Score=267.97  Aligned_cols=173  Identities=30%  Similarity=0.466  Sum_probs=147.8

Q ss_pred             CCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC
Q 010730            1 MFTSGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k----~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~   76 (502)
                      |+.||+|.+++.+    ..++++..+..++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||+++.+...
T Consensus       146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~~~-~~~kL~DFgla~~~~~~  222 (478)
T PTZ00267        146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK--MMHRDLKSANIFLMPT-GIIKLGDFGFSKQYSDS  222 (478)
T ss_pred             CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--EEECCcCHHhEEECCC-CcEEEEeCcCceecCCc
Confidence            6789999998754    356999999999999999999999998  9999999999999876 79999999999876543


Q ss_pred             CC---cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHH
Q 010730           77 QQ---AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEAR  152 (502)
Q Consensus        77 ~~---~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~  152 (502)
                      ..   ....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.. .+..+++..+..+..+ .++...+..++
T Consensus       223 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~-~~~~~~~~~~~~~~~~-~~~~~~s~~~~  300 (478)
T PTZ00267        223 VSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKG-PSQREIMQQVLYGKYD-PFPCPVSSGMK  300 (478)
T ss_pred             cccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhCCCC-CCCccCCHHHH
Confidence            22   345679999999998864 589999999999999999999999976 5566777777666554 23445678999


Q ss_pred             HHHHHhhh-CcCCCCCHHHHhcCCCCc
Q 010730          153 RFVGKCLE-NVSKRLPAKELLLDPFLA  178 (502)
Q Consensus       153 ~LI~kcL~-dP~kRpSa~ELL~hPff~  178 (502)
                      ++|.+||. +|.+||++.++|.|+|++
T Consensus       301 ~li~~~L~~dP~~Rps~~~~l~~~~~~  327 (478)
T PTZ00267        301 ALLDPLLSKNPALRPTTQQLLHTEFLK  327 (478)
T ss_pred             HHHHHHhccChhhCcCHHHHHhCHHHH
Confidence            99999998 999999999999999985


No 107
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.96  E-value=7.4e-29  Score=245.87  Aligned_cols=178  Identities=26%  Similarity=0.443  Sum_probs=147.1

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.||+|.+++.+.+.+++..++.|+.||+.||.|||+.+  |+||||||+||+++.+ +.+||+|||++..+... ...
T Consensus        78 ~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~nili~~~-~~~kl~dfg~~~~~~~~-~~~  153 (278)
T cd05606          78 LMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEH-GHVRISDLGLACDFSKK-KPH  153 (278)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--EEcCCCCHHHEEECCC-CCEEEccCcCccccCcc-CCc
Confidence            6789999999998889999999999999999999999988  9999999999999877 78999999998765432 234


Q ss_pred             cccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCC--ChHHHHHHhhcCCCCCcccccccHHHHHHHH
Q 010730           81 SVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECS--NPAQIYKKVTSGKLPGAFHRIQDAEARRFVG  156 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~--~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~  156 (502)
                      ..+|++.|+|||++.+  .++.++||||+||++|+|++|..||....  ....+.+.+...  +..++...+..+.++|.
T Consensus       154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~li~  231 (278)
T cd05606         154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM--AVELPDSFSPELRSLLE  231 (278)
T ss_pred             CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhcc--CCCCCCcCCHHHHHHHH
Confidence            5679999999998853  48899999999999999999999997642  223333333222  22344455889999999


Q ss_pred             Hhhh-CcCCCC-----CHHHHhcCCCCcCCCCCC
Q 010730          157 KCLE-NVSKRL-----PAKELLLDPFLASDAGEP  184 (502)
Q Consensus       157 kcL~-dP~kRp-----Sa~ELL~hPff~~~~~~~  184 (502)
                      +||. +|.+|+     ++.++++||||+...+..
T Consensus       232 ~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~  265 (278)
T cd05606         232 GLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQM  265 (278)
T ss_pred             HHhhcCHHhccCCCCCCHHHHHhCccccCCCchH
Confidence            9998 999999     999999999998765544


No 108
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=99.96  E-value=8.5e-29  Score=246.29  Aligned_cols=178  Identities=25%  Similarity=0.423  Sum_probs=145.3

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++...  ..+++..+..++.||+.||.|||+.+  |+||||||+||+++.+ +.++|+|||++........
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~-~~~~l~Dfg~~~~~~~~~~  157 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER--IVYRDLKPENILLDDY-GHIRISDLGLAVEIPEGET  157 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHEEECCC-CCEEEeeCCCceecCCCCc
Confidence            67899999988653  46999999999999999999999998  9999999999999876 7899999999987654444


Q ss_pred             cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCCh---HHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNP---AQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~---~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      ....+|++.|+|||++. ..++.++||||+||++|+|++|..||.+....   .++...+..+.  ..++...+..+++|
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l  235 (285)
T cd05605         158 IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ--EEYSEKFSEAARSI  235 (285)
T ss_pred             cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcc--cccCcccCHHHHHH
Confidence            45568999999999875 45889999999999999999999999764322   12233333222  22334467889999


Q ss_pred             HHHhhh-CcCCCC-----CHHHHhcCCCCcCCCCC
Q 010730          155 VGKCLE-NVSKRL-----PAKELLLDPFLASDAGE  183 (502)
Q Consensus       155 I~kcL~-dP~kRp-----Sa~ELL~hPff~~~~~~  183 (502)
                      |.+||. ||.+||     ++++++.||||....+.
T Consensus       236 i~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~  270 (285)
T cd05605         236 CRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFK  270 (285)
T ss_pred             HHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHH
Confidence            999998 999999     89999999999865443


No 109
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.96  E-value=7.5e-29  Score=260.43  Aligned_cols=174  Identities=29%  Similarity=0.398  Sum_probs=135.4

Q ss_pred             CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC--CCcc
Q 010730            3 TSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS--QQAH   80 (502)
Q Consensus         3 tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~--~~~~   80 (502)
                      .+|+|.+++...+.+++..++.++.||+.||+|||+++  ||||||||+|||++.+ +.+||+|||+++.....  ....
T Consensus       165 ~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~--IvHrDiKP~NIll~~~-~~vkL~DFG~a~~~~~~~~~~~~  241 (391)
T PHA03212        165 YKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENR--IIHRDIKAENIFINHP-GDVCLGDFGAACFPVDINANKYY  241 (391)
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHhEEEcCC-CCEEEEeCCcccccccccccccc
Confidence            36899999988888999999999999999999999998  9999999999999876 79999999999753221  2234


Q ss_pred             cccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCC-------hHHHHHHhhc-CCCCC----------
Q 010730           81 SVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSN-------PAQIYKKVTS-GKLPG----------  141 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~-------~~ql~~kI~~-g~~p~----------  141 (502)
                      ..+||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+...       ..++...+.. +..|.          
T Consensus       242 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~  321 (391)
T PHA03212        242 GWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANL  321 (391)
T ss_pred             cccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHH
Confidence            5689999999998864 589999999999999999999988754221       1111111100 10000          


Q ss_pred             ----------------c---ccc--cccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          142 ----------------A---FHR--IQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       142 ----------------~---~~~--~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                                      .   +..  ..+.++.+||.+||. ||.+||||+|+|+||||+.
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~  381 (391)
T PHA03212        322 DEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD  381 (391)
T ss_pred             HHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence                            0   000  124578999999999 9999999999999999975


No 110
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.96  E-value=1.6e-29  Score=262.18  Aligned_cols=179  Identities=26%  Similarity=0.451  Sum_probs=153.6

Q ss_pred             CCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKYT--RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~--~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      +|.||+|+-+|-+.+  .++++.++.|+.+|+.||++||...  ||.|||||+|||+|++ |+|+|.|+|||..+..++.
T Consensus       266 lMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~--iVYRDLKPeNILLDd~-GhvRISDLGLAvei~~g~~  342 (591)
T KOG0986|consen  266 LMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR--IVYRDLKPENILLDDH-GHVRISDLGLAVEIPEGKP  342 (591)
T ss_pred             eecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc--eeeccCChhheeeccC-CCeEeeccceEEecCCCCc
Confidence            589999999998776  7999999999999999999999998  9999999999999987 8999999999999988888


Q ss_pred             cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCC---hHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSN---PAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~---~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      ....+||.+|||||++. +.|+..+|+|||||++|+|+.|+.||.....   -+++-+.+...  +..++..-+++++++
T Consensus       343 ~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~--~~ey~~kFS~eaksl  420 (591)
T KOG0986|consen  343 IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED--PEEYSDKFSEEAKSL  420 (591)
T ss_pred             cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc--hhhcccccCHHHHHH
Confidence            88889999999999886 5599999999999999999999999965221   12333333332  223445568999999


Q ss_pred             HHHhhh-CcCCCCC-----HHHHhcCCCCcCCCCCC
Q 010730          155 VGKCLE-NVSKRLP-----AKELLLDPFLASDAGEP  184 (502)
Q Consensus       155 I~kcL~-dP~kRpS-----a~ELL~hPff~~~~~~~  184 (502)
                      .+.+|. ||.+|+.     ++++.+||||+..++..
T Consensus       421 c~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~r  456 (591)
T KOG0986|consen  421 CEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRR  456 (591)
T ss_pred             HHHHHccCHHHhccCCCcCcchhhhCcccccCCHhH
Confidence            999998 9999985     88999999999887754


No 111
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.96  E-value=2.2e-28  Score=236.81  Aligned_cols=172  Identities=31%  Similarity=0.580  Sum_probs=145.2

Q ss_pred             CCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-C
Q 010730            1 MFTSGTLREYRKK--YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-Q   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k--~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~   77 (502)
                      |+.+|+|.+++..  ...+++..++.++.||+.||+|||+.+  |+||||||+||+++.+ +.++|+|||++...... .
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~--i~H~di~p~nil~~~~-~~~~l~df~~~~~~~~~~~  157 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH--ILHRDLKTQNVFLTRT-NIIKVGDLGIARVLENQCD  157 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCchhEEEecC-CcEEEecccceEEecccCC
Confidence            4678999999976  346899999999999999999999998  9999999999999876 79999999999876432 2


Q ss_pred             CcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHH
Q 010730           78 QAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVG  156 (502)
Q Consensus        78 ~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~  156 (502)
                      ......|++.|+|||++.+ .++.++|||||||++++|++|..||.. .+...+...+..+..+. .+...+..+.++|.
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~  235 (257)
T cd08223         158 MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNA-KDMNSLVYRIIEGKLPP-MPKDYSPELGELIA  235 (257)
T ss_pred             ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHhcCCCC-CccccCHHHHHHHH
Confidence            2344678999999998764 488899999999999999999999976 44455555666666543 34456789999999


Q ss_pred             Hhhh-CcCCCCCHHHHhcCCCC
Q 010730          157 KCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       157 kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      +||. +|.+||++.++++||||
T Consensus       236 ~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         236 TMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             HHhccCcccCCCHHHHhcCCCC
Confidence            9998 99999999999999997


No 112
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96  E-value=3.1e-29  Score=269.22  Aligned_cols=168  Identities=26%  Similarity=0.466  Sum_probs=147.1

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      ++.||.|.+-|.+.+.+. ..+..|++||+.++.|||++|  ||||||||+|||++++.+.++|+|||.++.....  ..
T Consensus       397 ~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~g--vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~--~~  471 (612)
T KOG0603|consen  397 LLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQG--VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS--CD  471 (612)
T ss_pred             hccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcC--eeecCCChhheeecCCCCcEEEEEechhhhCchh--hc
Confidence            356788888887766555 788899999999999999998  9999999999999645589999999999887654  33


Q ss_pred             cccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhh
Q 010730           81 SVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCL  159 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL  159 (502)
                      +-+-|..|.|||++.. .|++++||||||++||+||+|+.||....+..+++.++..+++.    ...+.++++||.+||
T Consensus       472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s----~~vS~~AKdLl~~LL  547 (612)
T KOG0603|consen  472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS----ECVSDEAKDLLQQLL  547 (612)
T ss_pred             ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc----cccCHHHHHHHHHhc
Confidence            4466889999999874 59999999999999999999999998877778899999887664    566899999999999


Q ss_pred             h-CcCCCCCHHHHhcCCCC
Q 010730          160 E-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       160 ~-dP~kRpSa~ELL~hPff  177 (502)
                      + +|.+|+++.+++.||||
T Consensus       548 ~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  548 QVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             cCChhhCcChhhhccCcch
Confidence            9 99999999999999999


No 113
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.96  E-value=1.2e-28  Score=241.06  Aligned_cols=173  Identities=27%  Similarity=0.517  Sum_probs=140.7

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-C
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-Q   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~   77 (502)
                      |+.+|+|.+++...  ..+++..++.++.||+.||+|||+++  |+||||||+||+++.+ +.+||+|||++...... .
T Consensus        90 ~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~--ivh~dl~~~nili~~~-~~~~l~Dfg~~~~~~~~~~  166 (272)
T cd06637          90 FCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTEN-AEVKLVDFGVSAQLDRTVG  166 (272)
T ss_pred             cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHEEECCC-CCEEEccCCCceecccccc
Confidence            56789999999864  46899999999999999999999998  9999999999999987 78999999999765432 2


Q ss_pred             CcccccCCCcccCccccc------cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHH
Q 010730           78 QAHSVIGTPEFMAPELYE------EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEA  151 (502)
Q Consensus        78 ~~~s~vGTp~Y~APEvl~------~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l  151 (502)
                      ......|++.|+|||++.      ..|+.++|||||||++|+|++|..||.........+ .+.....+.......+..+
T Consensus       167 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  245 (272)
T cd06637         167 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-LIPRNPAPRLKSKKWSKKF  245 (272)
T ss_pred             cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH-HHhcCCCCCCCCCCcCHHH
Confidence            234567999999999874      247889999999999999999999997644333332 3333322223333456789


Q ss_pred             HHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          152 RRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       152 ~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      ++||.+||. +|.+|||+.+++.||||
T Consensus       246 ~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         246 QSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            999999998 99999999999999997


No 114
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96  E-value=9.6e-29  Score=252.65  Aligned_cols=175  Identities=30%  Similarity=0.532  Sum_probs=140.2

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGH-DPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~-g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++.+.+.+++..++.++.||+.||.|||+. +  |+||||||+|||++.+ +.+||+|||++..+... ..
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~--ivH~dlkp~Nili~~~-~~~kL~Dfg~~~~~~~~-~~  159 (333)
T cd06650          84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS-MA  159 (333)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCC--EEecCCChhhEEEcCC-CCEEEeeCCcchhhhhh-cc
Confidence            578999999999988899999999999999999999974 5  9999999999999876 78999999998765332 23


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHH---------------------------
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIY---------------------------  131 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~---------------------------  131 (502)
                      ....||+.|+|||++.+ .++.++|||||||++|+|++|..||... ...++.                           
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (333)
T cd06650         160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP-DAKELELMFGCPVEGDPAESETSPRPRPPGRPL  238 (333)
T ss_pred             ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-chhHHHHHhcCcccCCccccccCcccCCccchh
Confidence            44679999999998865 4889999999999999999999999652 222221                           


Q ss_pred             -----------------HHhhcCCCCCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          132 -----------------KKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       132 -----------------~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                                       ..+.....+.......+.++++||.+||. ||.+|||+.|+|.||||+..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  305 (333)
T cd06650         239 SSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  305 (333)
T ss_pred             hhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence                             11111111111112346789999999999 99999999999999999754


No 115
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.96  E-value=1.7e-28  Score=239.75  Aligned_cols=173  Identities=28%  Similarity=0.491  Sum_probs=140.3

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~   79 (502)
                      |+.+|+|.+++...+.+++..++.++.||+.||.|||+++  |+|+||||+||+++.+ +.+||+|||++....... ..
T Consensus        87 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~~-~~~~l~dfg~~~~~~~~~~~~  163 (267)
T cd06645          87 FCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKG--KMHRDIKGANILLTDN-GHVKLADFGVSAQITATIAKR  163 (267)
T ss_pred             ccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEECcceeeeEccCccccc
Confidence            5678999999998889999999999999999999999998  9999999999999876 789999999987654321 22


Q ss_pred             ccccCCCcccCccccc----cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccc--cccHHHHH
Q 010730           80 HSVIGTPEFMAPELYE----EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHR--IQDAEARR  153 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~----~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~--~~s~~l~~  153 (502)
                      ....|++.|+|||++.    +.++.++|+|||||++|+|++|..||........+.........+..+..  ..+..+++
T Consensus       164 ~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (267)
T cd06645         164 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHH  243 (267)
T ss_pred             ccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHH
Confidence            3457999999999873    34888999999999999999999999764443333333222222222211  23578999


Q ss_pred             HHHHhhh-CcCCCCCHHHHhcCCC
Q 010730          154 FVGKCLE-NVSKRLPAKELLLDPF  176 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~hPf  176 (502)
                      +|.+||. +|.+||++++++.|||
T Consensus       244 li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         244 FVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             HHHHHccCCchhCcCHHHHhcCCC
Confidence            9999998 9999999999999998


No 116
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.96  E-value=2e-28  Score=249.05  Aligned_cols=154  Identities=23%  Similarity=0.385  Sum_probs=126.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC---CcccccCCCcccCcc
Q 010730           16 RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ---QAHSVIGTPEFMAPE   92 (502)
Q Consensus        16 ~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~---~~~s~vGTp~Y~APE   92 (502)
                      ++++..+..++.||+.||+|||+.+  |+||||||+|||++.+ +.+||+|||+++.+....   ......+++.|+|||
T Consensus       170 ~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDiKp~Nil~~~~-~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  246 (338)
T cd05102         170 PLTMEDLICYSFQVARGMEFLASRK--CIHRDLAARNILLSEN-NVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPE  246 (338)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCccceEEEcCC-CcEEEeecccccccccCcchhcccCCCCCccccCcH
Confidence            4788899999999999999999988  9999999999999876 799999999997653221   122345678999999


Q ss_pred             ccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhhh-CcCCCCCHH
Q 010730           93 LYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAK  169 (502)
Q Consensus        93 vl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~  169 (502)
                      ++. ..|+.++|||||||++|+|++ |..||.+......+.+.+..+..+ ..+...++.++++|.+||. +|.+|||+.
T Consensus       247 ~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~RPs~~  325 (338)
T cd05102         247 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRM-RAPENATPEIYRIMLACWQGDPKERPTFS  325 (338)
T ss_pred             HhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHccCChhhCcCHH
Confidence            875 458999999999999999997 999998755555566666555443 2344567899999999998 999999999


Q ss_pred             HHhc
Q 010730          170 ELLL  173 (502)
Q Consensus       170 ELL~  173 (502)
                      |+++
T Consensus       326 el~~  329 (338)
T cd05102         326 ALVE  329 (338)
T ss_pred             HHHH
Confidence            9986


No 117
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96  E-value=3.3e-29  Score=243.08  Aligned_cols=172  Identities=25%  Similarity=0.486  Sum_probs=155.6

Q ss_pred             CCCCCcHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRK--KYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~--k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |.++|+|...++  +.+++++..+..|++|++.||.|||..+  ||||||||+|+|+... +.+||+|||.+.... ...
T Consensus       103 ya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~--VIhRdiKpenlLlg~~-~~lkiAdfGwsV~~p-~~k  178 (281)
T KOG0580|consen  103 YAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR--VIHRDIKPENLLLGSA-GELKIADFGWSVHAP-SNK  178 (281)
T ss_pred             ecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC--cccCCCCHHHhccCCC-CCeeccCCCceeecC-CCC
Confidence            578999999999  6788999999999999999999999988  9999999999999877 799999999997654 566


Q ss_pred             cccccCCCcccCccccccC-CCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGK  157 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~~-ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~k  157 (502)
                      ..+.|||..|.+||+.++. ++..+|+|++|+++||++.|.+||.. .+..+.|++|..-.+  .++...+..++++|.+
T Consensus       179 R~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes-~~~~etYkrI~k~~~--~~p~~is~~a~dlI~~  255 (281)
T KOG0580|consen  179 RKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFES-QSHSETYKRIRKVDL--KFPSTISGGAADLISR  255 (281)
T ss_pred             ceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhh-hhhHHHHHHHHHccc--cCCcccChhHHHHHHH
Confidence            7889999999999998764 89999999999999999999999977 448899999988776  3456778999999999


Q ss_pred             hhh-CcCCCCCHHHHhcCCCCcC
Q 010730          158 CLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       158 cL~-dP~kRpSa~ELL~hPff~~  179 (502)
                      ||. +|.+|++..|++.|||+..
T Consensus       256 ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  256 LLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             HhccCccccccHHHHhhhHHHHh
Confidence            998 9999999999999999853


No 118
>PHA02988 hypothetical protein; Provisional
Probab=99.96  E-value=1.1e-28  Score=246.39  Aligned_cols=168  Identities=21%  Similarity=0.299  Sum_probs=144.1

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGH-DPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~-g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++.+.+.+++.....++.||+.||.|||.. +  ++||||||+||+++.+ +.+||+|||+++.....  .
T Consensus       103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~--~~Hrdlkp~nill~~~-~~~kl~dfg~~~~~~~~--~  177 (283)
T PHA02988        103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTN--KPYKNLTSVSFLVTEN-YKLKIICHGLEKILSSP--P  177 (283)
T ss_pred             eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCC--CCCCcCChhhEEECCC-CcEEEcccchHhhhccc--c
Confidence            678999999999988999999999999999999999974 6  8899999999999987 79999999998765432  2


Q ss_pred             ccccCCCcccCcccccc---CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHH
Q 010730           80 HSVIGTPEFMAPELYEE---DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVG  156 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~---~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~  156 (502)
                      ...+||+.|+|||++.+   .|+.++|||||||++|+|++|..||.+ .+..+++..+..+.....++...+..+++||.
T Consensus       178 ~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~  256 (283)
T PHA02988        178 FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFEN-LTTKEIYDLIINKNNSLKLPLDCPLEIKCIVE  256 (283)
T ss_pred             ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHH
Confidence            34578999999998864   689999999999999999999999976 45677777776554443444456789999999


Q ss_pred             Hhhh-CcCCCCCHHHHhcC
Q 010730          157 KCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       157 kcL~-dP~kRpSa~ELL~h  174 (502)
                      +||. ||.+|||++|++..
T Consensus       257 ~cl~~dp~~Rps~~ell~~  275 (283)
T PHA02988        257 ACTSHDSIKRPNIKEILYN  275 (283)
T ss_pred             HHhcCCcccCcCHHHHHHH
Confidence            9999 99999999999864


No 119
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=99.96  E-value=1.3e-28  Score=245.41  Aligned_cols=176  Identities=25%  Similarity=0.417  Sum_probs=142.3

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.||+|.+++...  ..+++..+..++.||+.||.|||+.+  |+||||||+||+++.+ +.++|+|||++........
T Consensus        81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nil~~~~-~~~~l~Dfg~~~~~~~~~~  157 (285)
T cd05630          81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER--IVYRDLKPENILLDDH-GHIRISDLGLAVHVPEGQT  157 (285)
T ss_pred             ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECCC-CCEEEeeccceeecCCCcc
Confidence            57899999998654  35999999999999999999999988  9999999999999876 7899999999977654444


Q ss_pred             cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCCh--HHHHHHhhcCCCCCcccccccHHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNP--AQIYKKVTSGKLPGAFHRIQDAEARRFV  155 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~--~ql~~kI~~g~~p~~~~~~~s~~l~~LI  155 (502)
                      .....||+.|+|||++. ..++.++|||||||++|+|++|..||......  ......+... .+..+....++.+++||
T Consensus       158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li  236 (285)
T cd05630         158 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-VQEEYSEKFSPDARSLC  236 (285)
T ss_pred             ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh-hhhhcCccCCHHHHHHH
Confidence            44568999999999885 45899999999999999999999999763321  1112222111 11233445678899999


Q ss_pred             HHhhh-CcCCCCC-----HHHHhcCCCCcCC
Q 010730          156 GKCLE-NVSKRLP-----AKELLLDPFLASD  180 (502)
Q Consensus       156 ~kcL~-dP~kRpS-----a~ELL~hPff~~~  180 (502)
                      .+||. +|.+|+|     ++|++.||||+..
T Consensus       237 ~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~  267 (285)
T cd05630         237 KMLLCKDPKERLGCQGGGAREVKEHPLFKQI  267 (285)
T ss_pred             HHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence            99999 9999999     9999999999753


No 120
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=99.96  E-value=2e-28  Score=249.85  Aligned_cols=171  Identities=29%  Similarity=0.431  Sum_probs=136.1

Q ss_pred             CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccc
Q 010730            3 TSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSV   82 (502)
Q Consensus         3 tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~   82 (502)
                      .+++|.++++. +.+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++.....  .....
T Consensus       102 ~~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrdikp~Nil~~~~-~~~kl~Dfg~~~~~~~--~~~~~  175 (343)
T cd07878         102 MGADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSAG--IIHRDLKPSNVAVNED-CELRILDFGLARQADD--EMTGY  175 (343)
T ss_pred             CCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eecccCChhhEEECCC-CCEEEcCCccceecCC--CcCCc
Confidence            47889888754 56999999999999999999999998  9999999999999877 7999999999987543  23456


Q ss_pred             cCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcC--C--------------------
Q 010730           83 IGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSG--K--------------------  138 (502)
Q Consensus        83 vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g--~--------------------  138 (502)
                      +||+.|+|||++.+  .++.++|||||||++|+|++|..||.+... .+.+..+...  .                    
T Consensus       176 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (343)
T cd07878         176 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY-IDQLKRIMEVVGTPSPEVLKKISSEHARKYIQS  254 (343)
T ss_pred             cccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhc
Confidence            89999999998864  488999999999999999999999976332 2222222110  0                    


Q ss_pred             CC---C----cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          139 LP---G----AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       139 ~p---~----~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      ++   .    ......++.+.+||.+||. ||.+|||+.|+|.||||...
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         255 LPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY  304 (343)
T ss_pred             cccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence            00   0    0001235678899999999 99999999999999999753


No 121
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.96  E-value=2.5e-28  Score=245.40  Aligned_cols=181  Identities=24%  Similarity=0.383  Sum_probs=145.8

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-   77 (502)
                      |+.||+|.+++.+.  ..+++..++.++.||+.||+|||+.+  |+|+||||+||+++.+ +.++|+|||++....... 
T Consensus        82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~~~~~  158 (316)
T cd05574          82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG--IVYRDLKPENILLHES-GHIMLSDFDLSKQSDVEPP  158 (316)
T ss_pred             ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChHHeEEcCC-CCEEEeecchhhccccccc
Confidence            46789999999864  56999999999999999999999998  9999999999999876 799999999986542211 


Q ss_pred             -----------------------------CcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCCh
Q 010730           78 -----------------------------QAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNP  127 (502)
Q Consensus        78 -----------------------------~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~  127 (502)
                                                   .....+||..|+|||++.+ .++.++||||||+++|+|++|..||.+... 
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~-  237 (316)
T cd05574         159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR-  237 (316)
T ss_pred             ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch-
Confidence                                         1123478999999998764 488899999999999999999999976444 


Q ss_pred             HHHHHHhhcCCCCCcccccccHHHHHHHHHhhh-CcCCCCC----HHHHhcCCCCcCCCCCCC
Q 010730          128 AQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLP----AKELLLDPFLASDAGEPL  185 (502)
Q Consensus       128 ~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpS----a~ELL~hPff~~~~~~~l  185 (502)
                      ...+..+.............+..++++|.+||. +|.+||+    ++|+|.||||+...+...
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~~  300 (316)
T cd05574         238 DETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALI  300 (316)
T ss_pred             HHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhhc
Confidence            444444444333222222257899999999998 9999999    999999999987655443


No 122
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.96  E-value=1.9e-28  Score=239.24  Aligned_cols=174  Identities=32%  Similarity=0.484  Sum_probs=143.2

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccC-----
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-----   75 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~-----   75 (502)
                      |+.+|+|.+++.+.+++++..+..++.||+.||+|||+.+  |+|+||||+||+++.+ +.+||+|||++.....     
T Consensus        83 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~~  159 (265)
T cd06631          83 FVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNC--VVHRDIKGNNVMLMPN-GIIKLIDFGCARRLAWVGLHG  159 (265)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHhEEECCC-CeEEeccchhhHhhhhccccc
Confidence            5689999999998888999999999999999999999988  9999999999999876 7999999999875421     


Q ss_pred             --CCCcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHH
Q 010730           76 --SQQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEAR  152 (502)
Q Consensus        76 --~~~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~  152 (502)
                        ........|++.|+|||++.+ .++.++|+|||||++|+|++|..||......................+...+.++.
T Consensus       160 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (265)
T cd06631         160 THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAI  239 (265)
T ss_pred             cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHH
Confidence              111234568999999998864 48899999999999999999999997654444444333221222234445678999


Q ss_pred             HHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          153 RFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       153 ~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      ++|.+||. +|.+||++.++|.||||
T Consensus       240 ~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         240 DFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             HHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            99999998 99999999999999997


No 123
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.96  E-value=3e-28  Score=240.48  Aligned_cols=170  Identities=27%  Similarity=0.464  Sum_probs=141.2

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.+|+|.+++.+.+.+++..++.++.||+.||.|||+.+  |+||||||+||+++.+.+.++|+|||++......   .
T Consensus        90 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~---~  164 (267)
T PHA03390         90 YIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHN--IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP---S  164 (267)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEEeCCCCeEEEecCccceecCCC---c
Confidence            5789999999998889999999999999999999999998  9999999999999987348999999998765432   2


Q ss_pred             cccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCCh----HHHHHHhhcCCCCCcccccccHHHHHHH
Q 010730           81 SVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNP----AQIYKKVTSGKLPGAFHRIQDAEARRFV  155 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~----~ql~~kI~~g~~p~~~~~~~s~~l~~LI  155 (502)
                      ...|++.|+|||++.+ .++.++|||||||++|+|++|..||......    ..+.... .  .+.......++.+++||
T Consensus       165 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~li  241 (267)
T PHA03390        165 CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-Q--KKLPFIKNVSKNANDFV  241 (267)
T ss_pred             cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-c--ccCCcccccCHHHHHHH
Confidence            3468999999998864 5889999999999999999999999753221    2222222 2  12233446789999999


Q ss_pred             HHhhh-CcCCCCC-HHHHhcCCCCc
Q 010730          156 GKCLE-NVSKRLP-AKELLLDPFLA  178 (502)
Q Consensus       156 ~kcL~-dP~kRpS-a~ELL~hPff~  178 (502)
                      .+||. +|.+|++ ++|+|+||||.
T Consensus       242 ~~~l~~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        242 QSMLKYNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             HHHhccChhhCCchHHHHhcCCccc
Confidence            99999 9999996 69999999996


No 124
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.96  E-value=4.5e-28  Score=234.12  Aligned_cols=172  Identities=30%  Similarity=0.573  Sum_probs=146.5

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.|++|.+++...  ..+++..+..++.||+.||.|||+.+  |+|+||||+||+++.+ +.+||+|||+++.+.....
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~--i~h~dl~~~nili~~~-~~~~l~df~~~~~~~~~~~  156 (256)
T cd08529          80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK--ILHRDIKSLNLFLDAY-DNVKIGDLGVAKLLSDNTN  156 (256)
T ss_pred             eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEeCC-CCEEEcccccceeccCccc
Confidence            57899999999774  57999999999999999999999988  9999999999999986 7899999999987654322


Q ss_pred             -cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHH
Q 010730           79 -AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVG  156 (502)
Q Consensus        79 -~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~  156 (502)
                       .....|++.|+|||++.+ .++.++|+|||||++++|++|..||.. .+...+.+++..+..+. .....+..+.++|.
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~  234 (256)
T cd08529         157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDA-NNQGALILKIIRGVFPP-VSQMYSQQLAQLID  234 (256)
T ss_pred             hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCCCC-CccccCHHHHHHHH
Confidence             234578999999998754 488999999999999999999999976 45666677777666543 33356788999999


Q ss_pred             Hhhh-CcCCCCCHHHHhcCCCC
Q 010730          157 KCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       157 kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      +||. +|.+||++.++++|||+
T Consensus       235 ~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         235 QCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             HHccCCcccCcCHHHHhhCCCC
Confidence            9998 99999999999999996


No 125
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.96  E-value=1.8e-28  Score=256.48  Aligned_cols=176  Identities=25%  Similarity=0.360  Sum_probs=139.0

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC---Ccc
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ---QAH   80 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~---~~~   80 (502)
                      +++|.+++.+.+.+++..++.|+.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||++..+....   ...
T Consensus       169 ~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~g--ivHrDlkp~Nill~~~-~~~~l~DfG~a~~~~~~~~~~~~~  245 (392)
T PHA03207        169 KCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRG--IIHRDVKTENIFLDEP-ENAVLGDFGAACKLDAHPDTPQCY  245 (392)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcCC-CCEEEccCccccccCccccccccc
Confidence            5789999988889999999999999999999999998  9999999999999877 799999999997654322   123


Q ss_pred             cccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCC---hHHHHHHhh---cC----------------
Q 010730           81 SVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSN---PAQIYKKVT---SG----------------  137 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~---~~ql~~kI~---~g----------------  137 (502)
                      ..+||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+...   ..++...+.   ..                
T Consensus       246 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~  325 (392)
T PHA03207        246 GWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHF  325 (392)
T ss_pred             ccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHH
Confidence            4679999999998864 589999999999999999999999976432   111111111   00                


Q ss_pred             ------CCC-Cccc-----ccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCCC
Q 010730          138 ------KLP-GAFH-----RIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAG  182 (502)
Q Consensus       138 ------~~p-~~~~-----~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~~  182 (502)
                            ..+ ...+     ...+.++++||.+||. +|.+|||+.|+|.||||...+.
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~  383 (392)
T PHA03207        326 KQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPI  383 (392)
T ss_pred             HhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccch
Confidence                  000 0000     1235678899999999 9999999999999999976544


No 126
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.96  E-value=2e-28  Score=253.42  Aligned_cols=173  Identities=29%  Similarity=0.453  Sum_probs=139.3

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC--CCccc
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS--QQAHS   81 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~--~~~~s   81 (502)
                      +++|.+++...+.+++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||++......  .....
T Consensus        87 ~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nili~~~-~~~kL~Dfg~a~~~~~~~~~~~~~  163 (372)
T cd07853          87 QSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG--ILHRDIKPGNLLVNSN-CVLKICDFGLARVEEPDESKHMTQ  163 (372)
T ss_pred             ccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChHHEEECCC-CCEEeccccceeecccCccccCCC
Confidence            5789999988888999999999999999999999998  9999999999999887 79999999999865432  22334


Q ss_pred             ccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc-----------------------
Q 010730           82 VIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS-----------------------  136 (502)
Q Consensus        82 ~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~-----------------------  136 (502)
                      .++|+.|+|||++.+  .|+.++|||||||++|+|++|+.||.+.. ..+....+..                       
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~  242 (372)
T cd07853         164 EVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQS-PIQQLDLITDLLGTPSLEAMRSACEGARAHILR  242 (372)
T ss_pred             CCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCC-HHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHh
Confidence            578999999998864  37899999999999999999999997633 3332222211                       


Q ss_pred             C-CCCC------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          137 G-KLPG------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       137 g-~~p~------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      . ..+.      .+....+.++.+||.+||. ||.+|||+.|+|.||||...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         243 GPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             CCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence            1 0111      1112346789999999999 99999999999999999764


No 127
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.96  E-value=3.4e-29  Score=242.09  Aligned_cols=174  Identities=32%  Similarity=0.620  Sum_probs=141.7

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceec-cCCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAIL-RGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~-~~~~~~   79 (502)
                      |+.+|+|.+++.+.+.+++..+..++.||+.||.|||+++  |+|+||||+||+++.+ +.++|+|||.+... ......
T Consensus        79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~--i~H~dikp~NIl~~~~-~~~~l~Dfg~~~~~~~~~~~~  155 (260)
T PF00069_consen   79 YCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKG--IVHRDIKPENILLDEN-GEVKLIDFGSSVKLSENNENF  155 (260)
T ss_dssp             EETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTT--EEESSBSGGGEEESTT-SEEEESSGTTTEESTSTTSEB
T ss_pred             cccccccccccccccccccccccccccccccccccccccc--cccccccccccccccc-ccccccccccccccccccccc
Confidence            3567799999998889999999999999999999999998  9999999999999966 79999999999764 233344


Q ss_pred             ccccCCCcccCccccc--cCCCCcccchhHHHHHHHHhhccCCCCCCC--ChHHHHHHhhcCCCCCccc--ccccHHHHH
Q 010730           80 HSVIGTPEFMAPELYE--EDYNELVDIYSFGMCVLEMLTSEYPYSECS--NPAQIYKKVTSGKLPGAFH--RIQDAEARR  153 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~--~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~--~~~ql~~kI~~g~~p~~~~--~~~s~~l~~  153 (502)
                      ....+|+.|+|||++.  ..++.++||||||+++|+|++|..||.+..  +......+......+....  ......+.+
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  235 (260)
T PF00069_consen  156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRD  235 (260)
T ss_dssp             SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHH
Confidence            5678999999999886  568999999999999999999999998741  2233333333322211111  112378999


Q ss_pred             HHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          154 FVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      +|.+||. +|.+||++.++++||||
T Consensus       236 li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  236 LIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             HHHHHccCChhHCcCHHHHhcCCCC
Confidence            9999999 99999999999999997


No 128
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=1.1e-28  Score=262.88  Aligned_cols=176  Identities=30%  Similarity=0.509  Sum_probs=146.7

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-CCCC
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-GSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-~~~~   78 (502)
                      ||.||-+...+-.- ..|.+..|..+++|+|.||.|||+++  |||||||..|||++-+ |.|+|+|||++.... ....
T Consensus       110 FC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~--iIHRDLKAGNiL~Tld-GdirLADFGVSAKn~~t~qk  186 (1187)
T KOG0579|consen  110 FCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQN--IIHRDLKAGNILLTLD-GDIRLADFGVSAKNKSTRQK  186 (1187)
T ss_pred             ecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcc--hhhhhccccceEEEec-CcEeeecccccccchhHHhh
Confidence            56778887777664 56999999999999999999999999  9999999999999987 899999999986543 3345


Q ss_pred             cccccCCCcccCccccc------cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCC-CcccccccHHH
Q 010730           79 AHSVIGTPEFMAPELYE------EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLP-GAFHRIQDAEA  151 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~------~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p-~~~~~~~s~~l  151 (502)
                      ..+++|||+|||||++.      ..|+.++||||||++|.||..+.+|..+ -++-.+.-+|.....| -..+..++..+
T Consensus       187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe-lnpMRVllKiaKSePPTLlqPS~Ws~~F  265 (1187)
T KOG0579|consen  187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE-LNPMRVLLKIAKSEPPTLLQPSHWSRSF  265 (1187)
T ss_pred             hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc-cchHHHHHHHhhcCCCcccCcchhhhHH
Confidence            67899999999999774      3599999999999999999999999987 4554444455444433 23344557889


Q ss_pred             HHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          152 RRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       152 ~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      ++|+.+||. ||..||++++||+||||...
T Consensus       266 ~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~  295 (1187)
T KOG0579|consen  266 SDFLKRCLVKNPRNRPPAAQLLKHPFVQNA  295 (1187)
T ss_pred             HHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence            999999998 99999999999999999843


No 129
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.96  E-value=3.5e-28  Score=236.66  Aligned_cols=174  Identities=24%  Similarity=0.459  Sum_probs=147.0

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.||+|.+++++.+.+++..+..++.||+.||.|||+.+  |+||||+|+||+++.+ +.+||+|||++.....   ..
T Consensus        78 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~---~~  151 (260)
T cd05611          78 YLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRG--IIHRDIKPENLLIDQT-GHLKLTDFGLSRNGLE---NK  151 (260)
T ss_pred             ccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCC-CcEEEeecccceeccc---cc
Confidence            5789999999998888999999999999999999999998  9999999999999876 7899999999876432   23


Q ss_pred             cccCCCcccCccccccC-CCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC--CCcccccccHHHHHHHHH
Q 010730           81 SVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL--PGAFHRIQDAEARRFVGK  157 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~~-ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~--p~~~~~~~s~~l~~LI~k  157 (502)
                      ...|++.|+|||.+.+. ++.++||||||+++|+|++|..||.. .+..+++..+..+..  +.......+..+.++|.+
T Consensus       152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  230 (260)
T cd05611         152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHA-ETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINR  230 (260)
T ss_pred             cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHH
Confidence            45689999999987654 78999999999999999999999976 555666766665543  223333467899999999


Q ss_pred             hhh-CcCCCCC---HHHHhcCCCCcCCC
Q 010730          158 CLE-NVSKRLP---AKELLLDPFLASDA  181 (502)
Q Consensus       158 cL~-dP~kRpS---a~ELL~hPff~~~~  181 (502)
                      ||. +|.+||+   ++|+|.||||+...
T Consensus       231 ~l~~~p~~R~~~~~~~~~l~~~~~~~~~  258 (260)
T cd05611         231 LLCMDPAKRLGANGYQEIKSHPFFKSIN  258 (260)
T ss_pred             HccCCHHHccCCCcHHHHHcChHhhcCC
Confidence            998 9999995   57999999997544


No 130
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.96  E-value=4.3e-28  Score=237.02  Aligned_cols=174  Identities=32%  Similarity=0.560  Sum_probs=143.4

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC----
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS----   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~----   76 (502)
                      |+.+|+|.+++.+.+.+++..+..++.||+.||.|||+++  |+|+||||+||+++.+ +.+||+|||++......    
T Consensus        87 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~Dfg~~~~~~~~~~~~  163 (265)
T cd06652          87 HMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNM--IVHRDIKGANILRDSV-GNVKLGDFGASKRLQTICLSG  163 (265)
T ss_pred             ecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEecCC-CCEEECcCccccccccccccc
Confidence            4678999999998888999999999999999999999998  9999999999999876 79999999998765321    


Q ss_pred             CCcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHH
Q 010730           77 QQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFV  155 (502)
Q Consensus        77 ~~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI  155 (502)
                      .......|+..|+|||++. ..++.++|||||||++|+|++|..||........+.+ +.........+...+..+.++|
T Consensus       164 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i  242 (265)
T cd06652         164 TGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFK-IATQPTNPVLPPHVSDHCRDFL  242 (265)
T ss_pred             cccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHH-HhcCCCCCCCchhhCHHHHHHH
Confidence            1223456899999999875 4588899999999999999999999976544444433 3333222334445577899999


Q ss_pred             HHhhhCcCCCCCHHHHhcCCCCc
Q 010730          156 GKCLENVSKRLPAKELLLDPFLA  178 (502)
Q Consensus       156 ~kcL~dP~kRpSa~ELL~hPff~  178 (502)
                      .+|+.+|.+||+++|+++|||+.
T Consensus       243 ~~~l~~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         243 KRIFVEAKLRPSADELLRHTFVH  265 (265)
T ss_pred             HHHhcChhhCCCHHHHhcCcccC
Confidence            99999999999999999999984


No 131
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.96  E-value=3.9e-28  Score=237.81  Aligned_cols=173  Identities=34%  Similarity=0.602  Sum_probs=141.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC----
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS----   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~----   76 (502)
                      |+.+++|.+++.+.+.+++..++.++.||+.||+|||+++  |+||||||+||+++.+ +.+||+|||++..+...    
T Consensus        87 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~--i~H~~l~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~~  163 (266)
T cd06651          87 YMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNM--IVHRDIKGANILRDSA-GNVKLGDFGASKRLQTICMSG  163 (266)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCC-CCEEEccCCCccccccccccC
Confidence            4678999999998888999999999999999999999988  9999999999999876 78999999998765321    


Q ss_pred             CCcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHH
Q 010730           77 QQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFV  155 (502)
Q Consensus        77 ~~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI  155 (502)
                      .......++..|+|||++.+ .++.++|||||||++|+|++|..||........+.+...... ...++...++.++++|
T Consensus       164 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li  242 (266)
T cd06651         164 TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPT-NPQLPSHISEHARDFL  242 (266)
T ss_pred             CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCC-CCCCchhcCHHHHHHH
Confidence            11233568999999998764 478899999999999999999999987555555544433332 2344555678899999


Q ss_pred             HHhhh-CcCCCCCHHHHhcCCCCc
Q 010730          156 GKCLE-NVSKRLPAKELLLDPFLA  178 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL~hPff~  178 (502)
                      . ||. +|.+||+++|++.||||+
T Consensus       243 ~-~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         243 G-CIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             H-HhcCChhhCcCHHHHhcCcccc
Confidence            5 555 999999999999999996


No 132
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.96  E-value=5.4e-28  Score=248.51  Aligned_cols=172  Identities=30%  Similarity=0.516  Sum_probs=136.0

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~   79 (502)
                      |+.+|+|...    ...++..+..++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||++..+.... ..
T Consensus       153 ~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~-~~~kL~DfG~~~~~~~~~~~~  225 (353)
T PLN00034        153 FMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRH--IVHRDIKPSNLLINSA-KNVKIADFGVSRILAQTMDPC  225 (353)
T ss_pred             cCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCC-CCEEEcccccceecccccccc
Confidence            5778888653    34678888999999999999999998  9999999999999877 799999999998765332 23


Q ss_pred             ccccCCCcccCcccccc-----C-CCCcccchhHHHHHHHHhhccCCCCCCC--ChHHHHHHhhcCCCCCcccccccHHH
Q 010730           80 HSVIGTPEFMAPELYEE-----D-YNELVDIYSFGMCVLEMLTSEYPYSECS--NPAQIYKKVTSGKLPGAFHRIQDAEA  151 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-----~-ys~~~DIWSLGviLyeLLTG~~Pf~~~~--~~~ql~~kI~~g~~p~~~~~~~s~~l  151 (502)
                      ...+||+.|+|||++..     . ++.++|||||||++|+|++|+.||....  ....+...+..... .......+.++
T Consensus       226 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l  304 (353)
T PLN00034        226 NSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP-PEAPATASREF  304 (353)
T ss_pred             cccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCC-CCCCCccCHHH
Confidence            45689999999998742     2 3568999999999999999999996422  22223333332222 23344567899


Q ss_pred             HHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          152 RRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       152 ~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      ++||.+||. +|.+||++.|+|+||||...
T Consensus       305 ~~li~~~l~~~P~~Rpt~~ell~hp~~~~~  334 (353)
T PLN00034        305 RHFISCCLQREPAKRWSAMQLLQHPFILRA  334 (353)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence            999999998 99999999999999999764


No 133
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.96  E-value=3.7e-28  Score=239.59  Aligned_cols=173  Identities=28%  Similarity=0.507  Sum_probs=140.5

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-C
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-Q   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~   77 (502)
                      |+.+|+|.+++...  ..+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.++|+|||++...... .
T Consensus       100 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dl~~~nili~~~-~~~~l~dfg~~~~~~~~~~  176 (282)
T cd06636         100 FCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK--VIHRDIKGQNVLLTEN-AEVKLVDFGVSAQLDRTVG  176 (282)
T ss_pred             eCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEEeeCcchhhhhcccc
Confidence            56789999999763  45889999999999999999999998  9999999999999876 78999999998765322 2


Q ss_pred             CcccccCCCcccCccccc------cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHH
Q 010730           78 QAHSVIGTPEFMAPELYE------EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEA  151 (502)
Q Consensus        78 ~~~s~vGTp~Y~APEvl~------~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l  151 (502)
                      .....+|++.|+|||++.      ..++.++|||||||++|+|++|..||........+.. +.....+.......+..+
T Consensus       177 ~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  255 (282)
T cd06636         177 RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL-IPRNPPPKLKSKKWSKKF  255 (282)
T ss_pred             CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh-HhhCCCCCCcccccCHHH
Confidence            234567999999999874      3478899999999999999999999976544344332 333323323333457899


Q ss_pred             HHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          152 RRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       152 ~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      .+||.+||. +|.+||++.|||+||||
T Consensus       256 ~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         256 IDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             HHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            999999998 99999999999999997


No 134
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.95  E-value=4.8e-28  Score=240.85  Aligned_cols=174  Identities=31%  Similarity=0.578  Sum_probs=149.6

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.+|+|.+++.+.+.+++..+..++.||+.||.|||+.+  |+||||||.|||++.+ +.+||+|||++......  ..
T Consensus        82 ~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~--i~H~dl~p~nili~~~-~~~kl~dfg~~~~~~~~--~~  156 (290)
T cd05580          82 YVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLD--IVYRDLKPENLLLDSD-GYIKITDFGFAKRVKGR--TY  156 (290)
T ss_pred             cCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECCC-CCEEEeeCCCccccCCC--CC
Confidence            4679999999999899999999999999999999999988  9999999999999887 79999999999876543  34


Q ss_pred             cccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhh
Q 010730           81 SVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCL  159 (502)
Q Consensus        81 s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL  159 (502)
                      ...|++.|+|||.+. ..++.++||||||+++|+|++|..||.. ....+.++.+..+..+  ++...+..++++|.+||
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~-~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l  233 (290)
T cd05580         157 TLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFD-DNPIQIYEKILEGKVR--FPSFFSPDAKDLIRNLL  233 (290)
T ss_pred             CCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHhcCCcc--CCccCCHHHHHHHHHHc
Confidence            457899999999775 4478899999999999999999999976 4456667777665542  34445789999999999


Q ss_pred             h-CcCCCC-----CHHHHhcCCCCcCCCC
Q 010730          160 E-NVSKRL-----PAKELLLDPFLASDAG  182 (502)
Q Consensus       160 ~-dP~kRp-----Sa~ELL~hPff~~~~~  182 (502)
                      . +|.+|+     +++|++.||||+...+
T Consensus       234 ~~~p~~R~~~~~~~~~~l~~~~~~~~~~~  262 (290)
T cd05580         234 QVDLTKRLGNLKNGVNDIKNHPWFAGIDW  262 (290)
T ss_pred             cCCHHHccCcccCCHHHHHcCcccccCCH
Confidence            8 999999     8999999999976554


No 135
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.95  E-value=4.1e-28  Score=243.81  Aligned_cols=174  Identities=25%  Similarity=0.426  Sum_probs=136.2

Q ss_pred             CCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CCccc
Q 010730            4 SGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQAHS   81 (502)
Q Consensus         4 gGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~~~s   81 (502)
                      .++|.+++.+. ..+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||++...... .....
T Consensus        87 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~~~~~~  163 (309)
T cd07872          87 DKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK--VLHRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSN  163 (309)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEECccccceecCCCcccccc
Confidence            46899998765 45899999999999999999999998  9999999999999877 79999999999764322 22334


Q ss_pred             ccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc---CC------------------
Q 010730           82 VIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS---GK------------------  138 (502)
Q Consensus        82 ~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~---g~------------------  138 (502)
                      ..+|+.|+|||++.+  .++.++|||||||++|+|+||..||.+....+. ...+..   ..                  
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (309)
T cd07872         164 EVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE-LHLIFRLLGTPTEETWPGISSNDEFKNYN  242 (309)
T ss_pred             ccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHhhhcchhhhhhhh
Confidence            578999999998753  478999999999999999999999976433222 111110   00                  


Q ss_pred             CCC-------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          139 LPG-------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       139 ~p~-------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                      .+.       ......+.++++||.+||. ||.+|+|+.|+|.||||+...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         243 FPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             cCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence            000       0011246789999999999 999999999999999998643


No 136
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.95  E-value=5.7e-28  Score=233.29  Aligned_cols=172  Identities=30%  Similarity=0.506  Sum_probs=147.4

Q ss_pred             CCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHH-----hCCCCeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730            1 MFTSGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLH-----GHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus         1 ~~tgGsL~~yi~k----~~~L~e~~i~~i~~QIL~gL~YLH-----s~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      |+.+|+|.+++..    ..++++..++.++.||+.||.|||     +.+  |+|+||||+||+++.+ +.+||+|||++.
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~--i~h~dl~p~nili~~~-~~~kl~d~g~~~  158 (265)
T cd08217          82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT--VLHRDLKPANIFLDAN-NNVKLGDFGLAK  158 (265)
T ss_pred             hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc--ceecCCCHHHEEEecC-CCEEEecccccc
Confidence            4678999999976    367999999999999999999999     766  9999999999999976 799999999998


Q ss_pred             eccCCCC-cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccH
Q 010730           72 ILRGSQQ-AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDA  149 (502)
Q Consensus        72 ~~~~~~~-~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~  149 (502)
                      ....... .....|++.|+|||++.. .++.++|+||||+++|+|++|..||.. .+...+.+.+..+..+ .++...+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~  236 (265)
T cd08217         159 ILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTA-RNQLQLASKIKEGKFR-RIPYRYSS  236 (265)
T ss_pred             cccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccC-cCHHHHHHHHhcCCCC-CCccccCH
Confidence            7654333 345679999999998754 478899999999999999999999976 4467777777776654 34445678


Q ss_pred             HHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          150 EARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       150 ~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      .+.+++.+||. +|.+||++.++|+|||+
T Consensus       237 ~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         237 ELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            99999999998 99999999999999996


No 137
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.95  E-value=4.4e-28  Score=236.49  Aligned_cols=172  Identities=36%  Similarity=0.639  Sum_probs=143.0

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC---
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ---   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~---   77 (502)
                      |+.+++|.+++.+.+.+++..+..++.||+.||+|||+++  ++||||||+||+++.+ +.+||+|||+++.+....   
T Consensus        87 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~--ivH~di~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~~  163 (267)
T cd06628          87 YVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRG--IIHRDIKGANILVDNK-GGIKISDFGISKKLEANSLST  163 (267)
T ss_pred             ecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcC--cccccCCHHHEEEcCC-CCEEecccCCCcccccccccC
Confidence            4678999999999889999999999999999999999998  9999999999999876 789999999987664211   


Q ss_pred             ----CcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHH
Q 010730           78 ----QAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEAR  152 (502)
Q Consensus        78 ----~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~  152 (502)
                          ......|++.|+|||++.+ .++.++|+|||||++|+|++|..||.+......+. .+.....+ ..+...+..++
T Consensus       164 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~  241 (267)
T cd06628         164 KTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIF-KIGENASP-EIPSNISSEAI  241 (267)
T ss_pred             CccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHH-HHhccCCC-cCCcccCHHHH
Confidence                1123468899999998754 58889999999999999999999998755444433 33333222 34445678999


Q ss_pred             HHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          153 RFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       153 ~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      ++|.+||. +|.+||++.++++||||
T Consensus       242 ~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         242 DFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             HHHHHHccCCchhCcCHHHHhhCCCC
Confidence            99999999 99999999999999997


No 138
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95  E-value=1.5e-28  Score=259.85  Aligned_cols=171  Identities=26%  Similarity=0.429  Sum_probs=138.4

Q ss_pred             CcHHHHHHhCCCCCH-HHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC---cc
Q 010730            5 GTLREYRKKYTRVDI-RAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ---AH   80 (502)
Q Consensus         5 GsL~~yi~k~~~L~e-~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~---~~   80 (502)
                      -+|..++++.....+ -.++.|+.|||.++.++|.+|  |||.||||.|+|+-.  |.+||+|||+|+.+.....   ..
T Consensus       444 ~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~g--IVHSDLKPANFLlVk--G~LKLIDFGIA~aI~~DTTsI~kd  519 (677)
T KOG0596|consen  444 IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHG--IVHSDLKPANFLLVK--GRLKLIDFGIANAIQPDTTSIVKD  519 (677)
T ss_pred             ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhc--eeecCCCcccEEEEe--eeEEeeeechhcccCccccceeec
Confidence            578899988765443 589999999999999999999  999999999998864  7899999999998865432   35


Q ss_pred             cccCCCcccCcccccc------------CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCccccccc
Q 010730           81 SVIGTPEFMAPELYEE------------DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQD  148 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~------------~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s  148 (502)
                      +.+||+.||+||.+..            +.+.++||||||||||+|+.|++||....+...-+..|+...-...++.+..
T Consensus       520 sQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~  599 (677)
T KOG0596|consen  520 SQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPE  599 (677)
T ss_pred             cccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCC
Confidence            6899999999997631            2578999999999999999999999764444343444444433335555554


Q ss_pred             HH-HHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          149 AE-ARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       149 ~~-l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                      .. +.++++.||. ||.+|+++.+||+|||++.
T Consensus       600 ~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  600 NDELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             chHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence            44 9999999999 9999999999999999974


No 139
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.95  E-value=2.9e-28  Score=251.68  Aligned_cols=173  Identities=32%  Similarity=0.450  Sum_probs=132.5

Q ss_pred             CCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccc
Q 010730            4 SGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSV   82 (502)
Q Consensus         4 gGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~   82 (502)
                      .|+|.+++.+ .+.+++..++.|+.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||++............
T Consensus       140 ~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~-~~~kl~DfG~a~~~~~~~~~~~~  216 (357)
T PHA03209        140 SSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR--IIHRDVKTENIFINDV-DQVCIGDLGAAQFPVVAPAFLGL  216 (357)
T ss_pred             CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEEecCccccccccCcccccc
Confidence            5789999865 467999999999999999999999998  9999999999999877 78999999999754433334456


Q ss_pred             cCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCC----------hHHHHHHhhc-CCCCCccc------
Q 010730           83 IGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSN----------PAQIYKKVTS-GKLPGAFH------  144 (502)
Q Consensus        83 vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~----------~~ql~~kI~~-g~~p~~~~------  144 (502)
                      .||+.|+|||++.+ .|+.++|||||||++|+|+++..|+.....          ...+.+.+.. +..|..++      
T Consensus       217 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  296 (357)
T PHA03209        217 AGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSR  296 (357)
T ss_pred             cccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccH
Confidence            79999999998754 589999999999999999985555432111          1122222211 11111111      


Q ss_pred             ------------------------ccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          145 ------------------------RIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       145 ------------------------~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                                              ...+..+.+||.+||. ||.+||||.|+|+||||+.
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        297 LVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             HHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence                                    1234567789999999 9999999999999999974


No 140
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.95  E-value=2.3e-28  Score=237.73  Aligned_cols=175  Identities=33%  Similarity=0.565  Sum_probs=145.0

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHh-CCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHG-HDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs-~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+++|.+++... ..+++..+..++.||+.||+|||+ .+  ++|+||||+||+++.+ +.+||+|||++..+.....
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~--i~H~dl~~~ni~~~~~-~~~~l~d~g~~~~~~~~~~  156 (265)
T cd06605          80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHK--IIHRDVKPSNILVNSR-GQIKLCDFGVSGQLVNSLA  156 (265)
T ss_pred             ecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCC--eecCCCCHHHEEECCC-CCEEEeecccchhhHHHHh
Confidence            46789999999876 789999999999999999999999 77  9999999999999986 7999999999876533221


Q ss_pred             cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCC----CChHHHHHHhhcCCCCCcccccccHHHHH
Q 010730           79 AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSEC----SNPAQIYKKVTSGKLPGAFHRIQDAEARR  153 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~----~~~~ql~~kI~~g~~p~~~~~~~s~~l~~  153 (502)
                       ....|++.|+|||.+.+ .++.++|||||||++|+|++|..||...    ....+..+.+..+..+.......+.++++
T Consensus       157 -~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (265)
T cd06605         157 -KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQD  235 (265)
T ss_pred             -hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHH
Confidence             22678999999998754 5889999999999999999999999764    23444555555554443333336788999


Q ss_pred             HHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          154 FVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                      +|.+||. +|.+|||+.+++.||||+.
T Consensus       236 li~~~l~~~p~~Rpt~~~ll~~~~~~~  262 (265)
T cd06605         236 FVNLCLIKDPRERPSYKELLEHPFIKK  262 (265)
T ss_pred             HHHHHcCCCchhCcCHHHHhhCchhhc
Confidence            9999998 9999999999999999974


No 141
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=99.95  E-value=4.7e-28  Score=233.99  Aligned_cols=173  Identities=33%  Similarity=0.558  Sum_probs=140.0

Q ss_pred             CCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-C
Q 010730            1 MFTSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-Q   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~   78 (502)
                      |+.+++|.+++.. ...+++..++.++.||+.||.|||..+  |+||||+|+||+++.+ +.+||+|||++..+.... .
T Consensus        79 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~ni~~~~~-~~~~l~dfg~~~~~~~~~~~  155 (256)
T cd06612          79 YCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNK--KIHRDIKAGNILLNEE-GQAKLADFGVSGQLTDTMAK  155 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEECCC-CcEEEcccccchhcccCccc
Confidence            4678999999976 457899999999999999999999988  9999999999999886 789999999998765433 2


Q ss_pred             cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCC-CcccccccHHHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLP-GAFHRIQDAEARRFVG  156 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p-~~~~~~~s~~l~~LI~  156 (502)
                      .....|+..|+|||++.+ .++.++|||||||++|+|++|..||.......... .+.....+ ...+...+..+.++|.
T Consensus       156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~  234 (256)
T cd06612         156 RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF-MIPNKPPPTLSDPEKWSPEFNDFVK  234 (256)
T ss_pred             cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh-hhccCCCCCCCchhhcCHHHHHHHH
Confidence            344568999999998764 48889999999999999999999997643333222 22222111 1222345678999999


Q ss_pred             Hhhh-CcCCCCCHHHHhcCCCC
Q 010730          157 KCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       157 kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      +||. +|.+|||+.|+|.||||
T Consensus       235 ~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         235 KCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             HHHhcChhhCcCHHHHhcCCCC
Confidence            9998 99999999999999997


No 142
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.95  E-value=6.2e-28  Score=239.46  Aligned_cols=174  Identities=26%  Similarity=0.475  Sum_probs=139.0

Q ss_pred             CCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC
Q 010730            1 MFTSGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k----~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~   76 (502)
                      |+.+|+|.++++.    ...+++..++.++.||+.||+|||.++  |+||||||+||+++.+ +.+||+|||++..+...
T Consensus       105 y~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~nili~~~-~~~kl~dfg~~~~~~~~  181 (291)
T cd06639         105 LCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR--IIHRDVKGNNILLTTE-GGVKLVDFGVSAQLTST  181 (291)
T ss_pred             ECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcCC-CCEEEeecccchhcccc
Confidence            5679999999863    457899999999999999999999988  9999999999999876 78999999998765432


Q ss_pred             C-CcccccCCCcccCcccccc------CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCC-ccccccc
Q 010730           77 Q-QAHSVIGTPEFMAPELYEE------DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPG-AFHRIQD  148 (502)
Q Consensus        77 ~-~~~s~vGTp~Y~APEvl~~------~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~-~~~~~~s  148 (502)
                      . ......|++.|+|||++..      .++.++|||||||++|+|++|.+||........+. .+..+..+. .......
T Consensus       182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  260 (291)
T cd06639         182 RLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLF-KIPRNPPPTLLHPEKWC  260 (291)
T ss_pred             cccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHH-HHhcCCCCCCCcccccC
Confidence            2 2234578999999998743      26789999999999999999999997644333333 333332221 1122345


Q ss_pred             HHHHHHHHHhhh-CcCCCCCHHHHhcCCCCc
Q 010730          149 AEARRFVGKCLE-NVSKRLPAKELLLDPFLA  178 (502)
Q Consensus       149 ~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~  178 (502)
                      ..++++|.+||. +|.+||++.|+++||||+
T Consensus       261 ~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         261 RSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             HHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            689999999998 999999999999999984


No 143
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.95  E-value=7.9e-28  Score=237.62  Aligned_cols=176  Identities=32%  Similarity=0.538  Sum_probs=142.1

Q ss_pred             CCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CC
Q 010730            1 MFTSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~   78 (502)
                      |+.+|+|..++.+ ..++++..+..++.||+.||.|||+.+  |+||||||+||+++.+ +.+||+|||++...... ..
T Consensus        83 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~--i~H~dlkp~nili~~~-~~~kl~dfg~~~~~~~~~~~  159 (282)
T cd06643          83 FCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK--IIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTIQR  159 (282)
T ss_pred             ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEccC-CCEEEccccccccccccccc
Confidence            5678999998865 467999999999999999999999998  9999999999999876 79999999998754322 22


Q ss_pred             cccccCCCcccCccccc------cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCC-CcccccccHHH
Q 010730           79 AHSVIGTPEFMAPELYE------EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLP-GAFHRIQDAEA  151 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~------~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p-~~~~~~~s~~l  151 (502)
                      .....|++.|+|||++.      ..++.++|||||||++|+|++|..||... +..+....+.....+ ...+...+..+
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (282)
T cd06643         160 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSSEF  238 (282)
T ss_pred             cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCcccc-CHHHHHHHHhhcCCCCCCCccccCHHH
Confidence            34467899999999873      23678999999999999999999999763 344444444333222 22334457889


Q ss_pred             HHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          152 RRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       152 ~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      ++||.+||. +|.+||++.++++||||...
T Consensus       239 ~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         239 KDFLKKCLEKNVDARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence            999999998 99999999999999999754


No 144
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=99.95  E-value=8.6e-28  Score=232.19  Aligned_cols=173  Identities=29%  Similarity=0.509  Sum_probs=145.2

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++.+.  ..+++..++.++.||+.+|.|||+++  |+|+||||+||+++.+.+.+||+|||++........
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~  157 (256)
T cd08220          80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL--ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK  157 (256)
T ss_pred             cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence            56799999999764  35899999999999999999999998  999999999999986656789999999987765444


Q ss_pred             cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGK  157 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~k  157 (502)
                      .....|++.|+|||++.+ .++.++||||||+++|+|++|..||... +.......+..+..+ .++...+..++++|.+
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~  235 (256)
T cd08220         158 AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAA-NLPALVLKIMSGTFA-PISDRYSPDLRQLILS  235 (256)
T ss_pred             ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccC-chHHHHHHHHhcCCC-CCCCCcCHHHHHHHHH
Confidence            455678999999998864 4788999999999999999999999764 444555555554433 3334467889999999


Q ss_pred             hhh-CcCCCCCHHHHhcCCCC
Q 010730          158 CLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       158 cL~-dP~kRpSa~ELL~hPff  177 (502)
                      ||. +|.+|||+.|+|+||||
T Consensus       236 ~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         236 MLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             HccCChhhCCCHHHHhhCCCC
Confidence            998 99999999999999996


No 145
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.95  E-value=1.6e-28  Score=246.10  Aligned_cols=173  Identities=31%  Similarity=0.444  Sum_probs=129.6

Q ss_pred             CCCcHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeC---CCCcEEEEecCCc
Q 010730            3 TSGTLREYRKKY---------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNG---HLGQIKIGDLGLA   70 (502)
Q Consensus         3 tgGsL~~yi~k~---------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~---~~g~vKL~DFGlA   70 (502)
                      .+++|.+++...         ..+++..++.++.||+.||.|||+++  |+||||||+|||+..   ..+.+||+|||++
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07867          82 AEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             eCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence            457888887532         24889999999999999999999998  999999999999942   2368999999999


Q ss_pred             eeccCCC----CcccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCCh---------HHHH----
Q 010730           71 AILRGSQ----QAHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNP---------AQIY----  131 (502)
Q Consensus        71 ~~~~~~~----~~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~---------~ql~----  131 (502)
                      +.+....    .....+||+.|+|||++.+  .++.++|||||||++|+|+||.+||......         .++.    
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~  239 (317)
T cd07867         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFS  239 (317)
T ss_pred             eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHH
Confidence            8764322    2344678999999998854  4789999999999999999999999642210         1111    


Q ss_pred             ----------HHhhcC-CCC--------------------CcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          132 ----------KKVTSG-KLP--------------------GAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       132 ----------~kI~~g-~~p--------------------~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                                ..+... .++                    .......+..+.++|.+||. ||.+|||+.|+|+||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         240 VMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             hcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                      000000 000                    00011234568899999999 99999999999999997


No 146
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.95  E-value=4.9e-28  Score=240.85  Aligned_cols=177  Identities=25%  Similarity=0.413  Sum_probs=144.0

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++...  ..+++..+..++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++........
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--iiH~dikp~Nili~~~-~~~kl~Dfg~~~~~~~~~~  157 (285)
T cd05632          81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN--TVYRDLKPENILLDDY-GHIRISDLGLAVKIPEGES  157 (285)
T ss_pred             eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEECCC-CCEEEecCCcceecCCCCc
Confidence            57889999988653  46999999999999999999999998  9999999999999877 6899999999976654444


Q ss_pred             cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCCh---HHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNP---AQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~---~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      .....|++.|+|||++. ..++.++|+|||||++|+|++|..||......   ..+...+..+.  ..+....+.++.+|
T Consensus       158 ~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l  235 (285)
T cd05632         158 IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE--EVYSAKFSEEAKSI  235 (285)
T ss_pred             ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc--cccCccCCHHHHHH
Confidence            45568999999999875 45899999999999999999999999764332   22233333222  12334457789999


Q ss_pred             HHHhhh-CcCCCCC-----HHHHhcCCCCcCCCC
Q 010730          155 VGKCLE-NVSKRLP-----AKELLLDPFLASDAG  182 (502)
Q Consensus       155 I~kcL~-dP~kRpS-----a~ELL~hPff~~~~~  182 (502)
                      +.+||. +|.+||+     +.+++.|+||+....
T Consensus       236 i~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~  269 (285)
T cd05632         236 CKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNF  269 (285)
T ss_pred             HHHHccCCHhHcCCCcccChHHHHcChhhhcCCH
Confidence            999999 9999999     899999999986543


No 147
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.95  E-value=6.2e-28  Score=237.04  Aligned_cols=175  Identities=29%  Similarity=0.527  Sum_probs=146.6

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~~   79 (502)
                      |+.+|+|.+++... ++++..++.++.||+.||.|||+++  |+||||+|+||+++.+ +.++|+|||+++.+... ...
T Consensus        80 ~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~~-~~~~l~d~g~~~~~~~~~~~~  155 (274)
T cd06609          80 YCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEG--KIHRDIKAANILLSEE-GDVKLADFGVSGQLTSTMSKR  155 (274)
T ss_pred             eeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCC-CCEEEcccccceeeccccccc
Confidence            56789999999875 8999999999999999999999988  9999999999999986 79999999999877543 233


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ....|++.|+|||++.+ .++.++|||||||++|+|+||..||.. .+..+....+..+..+.......+..+.++|.+|
T Consensus       156 ~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  234 (274)
T cd06609         156 NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSD-LHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLC  234 (274)
T ss_pred             ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCccc-CchHHHHHHhhhcCCCCCcccccCHHHHHHHHHH
Confidence            45678999999998754 589999999999999999999999966 3455555555555443322222678899999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcCC
Q 010730          159 LE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      |. +|.+|||+++++.||||+..
T Consensus       235 l~~~p~~Rpt~~~il~~~~~~~~  257 (274)
T cd06609         235 LNKDPKERPSAKELLKHKFIKKA  257 (274)
T ss_pred             hhCChhhCcCHHHHhhChhhcCC
Confidence            98 99999999999999999754


No 148
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.95  E-value=4.9e-28  Score=238.62  Aligned_cols=171  Identities=25%  Similarity=0.409  Sum_probs=135.3

Q ss_pred             CCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cccc
Q 010730            4 SGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QAHS   81 (502)
Q Consensus         4 gGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~~s   81 (502)
                      +|+|.+++.+ .+.+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++....... ....
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~  158 (284)
T cd07839          82 DQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN--VLHRDLKPQNLLINKN-GELKLADFGLARAFGIPVRCYSA  158 (284)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEcCC-CcEEECccchhhccCCCCCCcCC
Confidence            5789888865 567999999999999999999999998  9999999999999876 799999999997654322 2234


Q ss_pred             ccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCC-------------------CC
Q 010730           82 VIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGK-------------------LP  140 (502)
Q Consensus        82 ~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~-------------------~p  140 (502)
                      ..+++.|+|||++.+  .++.++|||||||++|+|+||..||....+....++.+....                   .+
T Consensus       159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07839         159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP  238 (284)
T ss_pred             CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence            568999999998754  378999999999999999999988755444444333332100                   00


Q ss_pred             C--------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          141 G--------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       141 ~--------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      .        ......+.++++||.+||. +|.+|||++++|.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         239 MYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             CCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            0        0011246789999999999 99999999999999997


No 149
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.95  E-value=2.2e-28  Score=245.14  Aligned_cols=179  Identities=25%  Similarity=0.443  Sum_probs=152.2

Q ss_pred             CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCC--CCcEEEEecCCceeccCC---
Q 010730            2 FTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGH--LGQIKIGDLGLAAILRGS---   76 (502)
Q Consensus         2 ~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~--~g~vKL~DFGlA~~~~~~---   76 (502)
                      |.||.|...|.+.+.+++.++..+.++|..||+|||..|  |.||||||+|||-...  ...|||+||.|...+...   
T Consensus       158 m~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kg--IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~  235 (463)
T KOG0607|consen  158 MRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKG--IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDC  235 (463)
T ss_pred             ccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcC--cccccCCccceeecCCCCcCceeeeccccccccccCCCC
Confidence            679999999999999999999999999999999999998  9999999999998643  246899999998654321   


Q ss_pred             -----CCcccccCCCcccCccccc------cCCCCcccchhHHHHHHHHhhccCCCCCC--------------CChHHHH
Q 010730           77 -----QQAHSVIGTPEFMAPELYE------EDYNELVDIYSFGMCVLEMLTSEYPYSEC--------------SNPAQIY  131 (502)
Q Consensus        77 -----~~~~s~vGTp~Y~APEvl~------~~ys~~~DIWSLGviLyeLLTG~~Pf~~~--------------~~~~ql~  131 (502)
                           ..+.+.+|+..|||||+..      ..|+.++|.||||||||.||+|.+||.+.              .-...++
T Consensus       236 spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LF  315 (463)
T KOG0607|consen  236 SPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLF  315 (463)
T ss_pred             CCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHH
Confidence                 2245678999999999763      34999999999999999999999999651              0135689


Q ss_pred             HHhhcCCC--CCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCCC
Q 010730          132 KKVTSGKL--PGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAG  182 (502)
Q Consensus       132 ~kI~~g~~--p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~~  182 (502)
                      ..|+.|++  |..-|..++.+++++|+.+|. ++..|.+|.++|+|||++.-..
T Consensus       316 esIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~  369 (463)
T KOG0607|consen  316 ESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAP  369 (463)
T ss_pred             HHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccch
Confidence            99999986  455566789999999999998 9999999999999999976443


No 150
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.95  E-value=5.3e-28  Score=235.20  Aligned_cols=173  Identities=29%  Similarity=0.519  Sum_probs=139.6

Q ss_pred             CCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC
Q 010730            1 MFTSGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k----~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~   76 (502)
                      |+.+++|.+++..    ...+++..++.++.||+.||.|||+++  |+|+||+|+||+++.+ +.+||+|||++......
T Consensus        90 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~~l~p~ni~~~~~-~~~~l~d~~~~~~~~~~  166 (275)
T cd06608          90 LCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK--VIHRDIKGQNILLTKN-AEVKLVDFGVSAQLDST  166 (275)
T ss_pred             cCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEEccC-CeEEECCCccceecccc
Confidence            5678999999865    357999999999999999999999998  9999999999999886 78999999998765432


Q ss_pred             C-CcccccCCCcccCcccccc------CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcc-ccccc
Q 010730           77 Q-QAHSVIGTPEFMAPELYEE------DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAF-HRIQD  148 (502)
Q Consensus        77 ~-~~~s~vGTp~Y~APEvl~~------~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~-~~~~s  148 (502)
                      . ......|++.|+|||++..      .++.++|||||||++|+|++|..||........+. .+..+..+... ....+
T Consensus       167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  245 (275)
T cd06608         167 LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALF-KIPRNPPPTLKSPENWS  245 (275)
T ss_pred             hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHH-HhhccCCCCCCchhhcC
Confidence            2 2344678999999998742      36788999999999999999999997643333333 34433332211 12246


Q ss_pred             HHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          149 AEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       149 ~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      ..+++||.+||. ||.+|||+.++++|||+
T Consensus       246 ~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         246 KKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            789999999998 99999999999999996


No 151
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.95  E-value=8.9e-28  Score=235.18  Aligned_cols=175  Identities=34%  Similarity=0.585  Sum_probs=140.3

Q ss_pred             CCCCCcHHHHHHhC-CCC--CHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC
Q 010730            1 MFTSGTLREYRKKY-TRV--DIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L--~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~   77 (502)
                      |+.+++|.+++... ..+  ++..+..++.||+.||.|||+.+  |+||||||+||+++...+.+||+|||++..+....
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~  163 (268)
T cd06624          86 QVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN  163 (268)
T ss_pred             cCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCeEEEecchhheecccCC
Confidence            56899999999864 556  88899999999999999999988  99999999999998755789999999987654322


Q ss_pred             -CcccccCCCcccCcccccc---CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHH
Q 010730           78 -QAHSVIGTPEFMAPELYEE---DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARR  153 (502)
Q Consensus        78 -~~~s~vGTp~Y~APEvl~~---~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~  153 (502)
                       ......|++.|+|||++..   .++.++|+||||+++|+|++|..||...........++........++...+.++++
T Consensus       164 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (268)
T cd06624         164 PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKN  243 (268)
T ss_pred             CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHH
Confidence             2334568999999998753   378899999999999999999999976444333222222112222445556789999


Q ss_pred             HHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          154 FVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      |+.+||. +|.+|||+.|++.||||
T Consensus       244 li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         244 FILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             HHHHHcCCCchhCCCHHHHHhCCCC
Confidence            9999998 99999999999999997


No 152
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=99.95  E-value=9.4e-28  Score=233.85  Aligned_cols=176  Identities=28%  Similarity=0.517  Sum_probs=142.8

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC---
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ---   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~---   77 (502)
                      |+.||+|.+++.+.+++++..++.|+.||+.||.|||+++  ++||||||+||+++.+...+||+|||++.......   
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~--i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~  161 (268)
T cd06630          84 WMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQ--IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA  161 (268)
T ss_pred             ccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEEcccccccccccccccC
Confidence            5688999999998889999999999999999999999998  99999999999998764469999999987654321   


Q ss_pred             --CcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCC--hHHHHHHhhcCCCCCcccccccHHHH
Q 010730           78 --QAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSN--PAQIYKKVTSGKLPGAFHRIQDAEAR  152 (502)
Q Consensus        78 --~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~--~~ql~~kI~~g~~p~~~~~~~s~~l~  152 (502)
                        ......||..|+|||++.+ .++.++|+||||+++|+|++|..||.....  .......+.........+...++.++
T Consensus       162 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (268)
T cd06630         162 GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLR  241 (268)
T ss_pred             CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHH
Confidence              1123568999999998754 588999999999999999999999964322  22222233222333344555678999


Q ss_pred             HHHHHhhh-CcCCCCCHHHHhcCCCCc
Q 010730          153 RFVGKCLE-NVSKRLPAKELLLDPFLA  178 (502)
Q Consensus       153 ~LI~kcL~-dP~kRpSa~ELL~hPff~  178 (502)
                      +++.+||. +|.+||++.++++||||+
T Consensus       242 ~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         242 DVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            99999998 999999999999999984


No 153
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.95  E-value=6.5e-28  Score=241.36  Aligned_cols=177  Identities=33%  Similarity=0.568  Sum_probs=142.6

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~~   79 (502)
                      |+.+|+|.+++.. +.+++..+..++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++...... ...
T Consensus       100 ~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~~-~~~kL~dfg~~~~~~~~~~~~  175 (292)
T cd06658         100 FLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQG--VIHRDIKSDSILLTSD-GRIKLSDFGFCAQVSKEVPKR  175 (292)
T ss_pred             CCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCC-CCEEEccCcchhhcccccccC
Confidence            5789999999855 56899999999999999999999998  9999999999999877 79999999998754322 223


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCC-cccccccHHHHHHHHH
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPG-AFHRIQDAEARRFVGK  157 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~-~~~~~~s~~l~~LI~k  157 (502)
                      ....|++.|+|||++.+ .++.++|||||||++|+|++|..||... ...+.+..+.....+. ......+..++++|.+
T Consensus       176 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  254 (292)
T cd06658         176 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE-PPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDL  254 (292)
T ss_pred             ceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhcCCCccccccccCHHHHHHHHH
Confidence            44678999999998754 5889999999999999999999999763 3444444443322111 1122356789999999


Q ss_pred             hhh-CcCCCCCHHHHhcCCCCcCCCC
Q 010730          158 CLE-NVSKRLPAKELLLDPFLASDAG  182 (502)
Q Consensus       158 cL~-dP~kRpSa~ELL~hPff~~~~~  182 (502)
                      ||. +|.+|||++++|+||||+....
T Consensus       255 ~l~~~P~~Rpt~~~il~~~~~~~~~~  280 (292)
T cd06658         255 MLVREPSQRATAQELLQHPFLKLAGP  280 (292)
T ss_pred             HccCChhHCcCHHHHhhChhhhccCC
Confidence            998 9999999999999999985543


No 154
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.95  E-value=1.1e-27  Score=231.25  Aligned_cols=176  Identities=28%  Similarity=0.510  Sum_probs=147.4

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC---
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ---   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~---   77 (502)
                      |+.+|+|.+++.+.+.+++..+..++.||+.||.|||.++  |+|+||+|+||+++.+ +.+||+|||++.......   
T Consensus        74 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~di~~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~  150 (265)
T cd05579          74 YLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNG--IIHRDLKPDNILIDSN-GHLKLTDFGLSKVGLVRRQIN  150 (265)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC--eecCCCCHHHeEEcCC-CCEEEEecccchhcccCcccc
Confidence            4678999999998889999999999999999999999988  9999999999999987 799999999987543221   


Q ss_pred             ------CcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHH
Q 010730           78 ------QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAE  150 (502)
Q Consensus        78 ------~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~  150 (502)
                            ......+++.|+|||++. ..++.++|+||||+++|+|++|..||.. ....+++..+..+..+.......+..
T Consensus       151 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (265)
T cd05579         151 LNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHG-ETPEEIFQNILNGKIEWPEDVEVSDE  229 (265)
T ss_pred             cccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHhcCCcCCCccccCCHH
Confidence                  223456889999999775 4478899999999999999999999976 55667777777655532222223789


Q ss_pred             HHHHHHHhhh-CcCCCCCH---HHHhcCCCCcCC
Q 010730          151 ARRFVGKCLE-NVSKRLPA---KELLLDPFLASD  180 (502)
Q Consensus       151 l~~LI~kcL~-dP~kRpSa---~ELL~hPff~~~  180 (502)
                      +.++|.+||. +|.+|||+   .++|.||||+.-
T Consensus       230 ~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~  263 (265)
T cd05579         230 AIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI  263 (265)
T ss_pred             HHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence            9999999998 99999999   999999999743


No 155
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.95  E-value=5.2e-28  Score=260.50  Aligned_cols=174  Identities=26%  Similarity=0.434  Sum_probs=140.0

Q ss_pred             CCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCC-CCcEEEEecCCceeccCCCCc
Q 010730            3 TSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGH-LGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         3 tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~-~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      -+-+|.+|++++  ..|+...++.+++|||.||.+||+.+  |||+||||||||+... ...|||+|||.+.....  ..
T Consensus       270 L~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~--IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q--~v  345 (586)
T KOG0667|consen  270 LSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG--IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ--RV  345 (586)
T ss_pred             hhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCChhheeeccCCcCceeEEecccccccCC--cc
Confidence            357899999875  46999999999999999999999998  9999999999999643 35799999999987643  34


Q ss_pred             ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc-CCC------------------
Q 010730           80 HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS-GKL------------------  139 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~-g~~------------------  139 (502)
                      .+.+.+..|.|||++- ..|+.+.||||||||++||++|.+.|++....+|+...+.- |..                  
T Consensus       346 ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~  425 (586)
T KOG0667|consen  346 YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSL  425 (586)
T ss_pred             eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhcc
Confidence            5889999999999775 56999999999999999999999889886666666433311 100                  


Q ss_pred             ----------------------------------CC-------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          140 ----------------------------------PG-------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       140 ----------------------------------p~-------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                                                        |.       .........+.+||.+||. ||.+|+|+.|+|+||||
T Consensus       426 ~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl  505 (586)
T KOG0667|consen  426 KGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFL  505 (586)
T ss_pred             CCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccc
Confidence                                              00       0000123457899999999 99999999999999999


Q ss_pred             cCC
Q 010730          178 ASD  180 (502)
Q Consensus       178 ~~~  180 (502)
                      ...
T Consensus       506 ~~~  508 (586)
T KOG0667|consen  506 TGT  508 (586)
T ss_pred             ccc
Confidence            754


No 156
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.95  E-value=9.6e-28  Score=236.77  Aligned_cols=173  Identities=25%  Similarity=0.475  Sum_probs=139.3

Q ss_pred             CCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC
Q 010730            1 MFTSGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k----~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~   76 (502)
                      |+.||+|.+++..    ...+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++..+...
T Consensus       101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~~-~~~kl~dfg~~~~~~~~  177 (286)
T cd06638         101 LCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK--TIHRDVKGNNILLTTE-GGVKLVDFGVSAQLTST  177 (286)
T ss_pred             ecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC--ccccCCCHHhEEECCC-CCEEEccCCceeecccC
Confidence            5689999998753    356899999999999999999999998  9999999999999887 78999999999876432


Q ss_pred             C-CcccccCCCcccCccccc------cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC-CCccccccc
Q 010730           77 Q-QAHSVIGTPEFMAPELYE------EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL-PGAFHRIQD  148 (502)
Q Consensus        77 ~-~~~s~vGTp~Y~APEvl~------~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~-p~~~~~~~s  148 (502)
                      . ......|++.|+|||++.      ..++.++|||||||++|+|++|..||........+.+ +..... ....+...+
T Consensus       178 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  256 (286)
T cd06638         178 RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFK-IPRNPPPTLHQPELWS  256 (286)
T ss_pred             CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh-ccccCCCcccCCCCcC
Confidence            2 233457999999999874      3478899999999999999999999977544343332 222221 122233456


Q ss_pred             HHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          149 AEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       149 ~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      ..++++|.+||. +|.+||++.|+|+|+||
T Consensus       257 ~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         257 NEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            789999999998 99999999999999997


No 157
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.95  E-value=8.3e-28  Score=232.92  Aligned_cols=176  Identities=31%  Similarity=0.588  Sum_probs=149.4

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHG-HDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs-~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+++|.+++.+...+++..+..++.||+.||+|||+ .+  ++||||+|+||+++.+ +.++|+|||++.........
T Consensus        80 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~--~~H~~l~~~ni~~~~~-~~~~l~df~~~~~~~~~~~~  156 (264)
T cd06623          80 YMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRH--IIHRDIKPSNLLINSK-GEVKIADFGISKVLENTLDQ  156 (264)
T ss_pred             ecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCC--CccCCCCHHHEEECCC-CCEEEccCccceecccCCCc
Confidence            56789999999988899999999999999999999999 88  9999999999999887 79999999999876543332


Q ss_pred             -ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCC--ChHHHHHHhhcCCCCCcccccccHHHHHHH
Q 010730           80 -HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECS--NPAQIYKKVTSGKLPGAFHRIQDAEARRFV  155 (502)
Q Consensus        80 -~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~--~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI  155 (502)
                       ....++..|+|||.+.. .++.++|+||||+++|+|+||..||....  ...++.+.+.....+.......+..+.++|
T Consensus       157 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  236 (264)
T cd06623         157 CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFI  236 (264)
T ss_pred             ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHH
Confidence             25678999999998754 47889999999999999999999997754  556666666655444332222678999999


Q ss_pred             HHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          156 GKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                      .+||. +|.+||++.++++|||++.
T Consensus       237 ~~~l~~~p~~R~~~~~ll~~~~~~~  261 (264)
T cd06623         237 SACLQKDPKKRPSAAELLQHPFIKK  261 (264)
T ss_pred             HHHccCChhhCCCHHHHHhCHHHHh
Confidence            99998 9999999999999999964


No 158
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.95  E-value=7.3e-28  Score=241.16  Aligned_cols=176  Identities=34%  Similarity=0.561  Sum_probs=143.4

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~   79 (502)
                      |+.||+|.+++.+ ..+++..+..++.||+.||.|||+.+  |+||||||+||+++.+ +.+||+|||++....... ..
T Consensus        98 ~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~g--i~H~dLkp~Nill~~~-~~~kl~dfg~~~~~~~~~~~~  173 (296)
T cd06654          98 YLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKR  173 (296)
T ss_pred             ccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCC-CCEEECccccchhcccccccc
Confidence            5789999999965 46899999999999999999999998  9999999999999876 799999999987654322 12


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ....|++.|+|||.+.+ .++.++|||||||++|+|++|..||........++.....+..+...+...+..+.++|.+|
T Consensus       174 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  253 (296)
T cd06654         174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC  253 (296)
T ss_pred             CcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHH
Confidence            34578999999998764 47899999999999999999999997644434444444333322223344567899999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcCC
Q 010730          159 LE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      |. +|.+||++.+++.||||...
T Consensus       254 l~~~p~~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         254 LDMDVEKRGSAKELLQHQFLKIA  276 (296)
T ss_pred             CcCCcccCcCHHHHhhChhhhcc
Confidence            98 99999999999999999743


No 159
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.95  E-value=7.4e-28  Score=237.48  Aligned_cols=165  Identities=28%  Similarity=0.522  Sum_probs=143.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccccCCCcccCccc
Q 010730           14 YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPEL   93 (502)
Q Consensus        14 ~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~vGTp~Y~APEv   93 (502)
                      +++++|..+-.+..-|+.||.||-... +|||||+||+|||++.. |.|||||||++..+..+.......|.+.|||||-
T Consensus       185 k~piPE~ilGk~tva~v~AL~YLKeKH-~viHRDvKPSNILlDe~-GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPER  262 (391)
T KOG0983|consen  185 KGPIPERILGKMTVAIVKALYYLKEKH-GVIHRDVKPSNILLDER-GNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPER  262 (391)
T ss_pred             cCCchHHhhhhhHHHHHHHHHHHHHhc-ceeecccCccceEEccC-CCEEeecccccceeecccccccccCCccccCccc
Confidence            467999999999999999999998543 39999999999999987 8999999999988876655556789999999998


Q ss_pred             cc----cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCccccc--ccHHHHHHHHHhhh-CcCCCC
Q 010730           94 YE----EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRI--QDAEARRFVGKCLE-NVSKRL  166 (502)
Q Consensus        94 l~----~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~--~s~~l~~LI~kcL~-dP~kRp  166 (502)
                      +.    .+|+..+||||||++++||+||++||.+|....+..-+|.+...| .++..  -++.+++|+..||. |+.+||
T Consensus       263 idp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP-~L~~~~gFSp~F~~fv~~CL~kd~r~RP  341 (391)
T KOG0983|consen  263 IDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPP-LLPGHMGFSPDFQSFVKDCLTKDHRKRP  341 (391)
T ss_pred             cCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCC-CCCcccCcCHHHHHHHHHHhhcCcccCc
Confidence            74    359999999999999999999999999998888888888874443 33332  58999999999998 999999


Q ss_pred             CHHHHhcCCCCcCCC
Q 010730          167 PAKELLLDPFLASDA  181 (502)
Q Consensus       167 Sa~ELL~hPff~~~~  181 (502)
                      -..+||+|||+....
T Consensus       342 ~Y~~Ll~h~Fi~~ye  356 (391)
T KOG0983|consen  342 KYNKLLEHPFIKRYE  356 (391)
T ss_pred             chHHHhcCcceeecc
Confidence            999999999997543


No 160
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.95  E-value=1.3e-27  Score=230.73  Aligned_cols=173  Identities=36%  Similarity=0.588  Sum_probs=145.0

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.+++|.+++.+.+.+++..+..++.||+.||.|||+.+  |+|+||||+||+++.+ +.+||+|||++..........
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~~~ni~~~~~-~~~kl~d~~~~~~~~~~~~~~  159 (258)
T cd06632          83 LVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRN--TVHRDIKGANILVDTN-GVVKLADFGMAKQVVEFSFAK  159 (258)
T ss_pred             ecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEEccCccceecccccccc
Confidence            5678999999998888999999999999999999999998  9999999999999876 799999999998765444345


Q ss_pred             cccCCCcccCcccccc-C-CCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           81 SVIGTPEFMAPELYEE-D-YNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~-~-ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ...|++.|+|||.+.. . ++.++|+|||||++|+|++|..||........+.+....... ..++...+..++++|.+|
T Consensus       160 ~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~  238 (258)
T cd06632         160 SFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKEL-PPIPDHLSDEAKDFILKC  238 (258)
T ss_pred             ccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccC-CCcCCCcCHHHHHHHHHH
Confidence            5779999999997753 3 789999999999999999999999775543444433322323 234455678999999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCC
Q 010730          159 LE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff  177 (502)
                      |. +|.+||++.++|.|||+
T Consensus       239 l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         239 LQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             hhcCcccCcCHHHHhcCCCC
Confidence            98 99999999999999996


No 161
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=99.95  E-value=1.1e-27  Score=232.52  Aligned_cols=173  Identities=31%  Similarity=0.567  Sum_probs=140.5

Q ss_pred             CCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC
Q 010730            1 MFTSGTLREYRKKY---TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~---~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~   77 (502)
                      ++.+++|.+++.+.   ..+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++..+....
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~--i~h~~l~p~ni~~~~~-~~~~l~df~~~~~~~~~~  156 (267)
T cd06610          80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG--QIHRDIKAGNILLGED-GSVKIADFGVSASLADGG  156 (267)
T ss_pred             ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcCC-CCEEEcccchHHHhccCc
Confidence            46799999999764   45999999999999999999999998  9999999999999987 789999999987654322


Q ss_pred             C-----cccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcc----ccc
Q 010730           78 Q-----AHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAF----HRI  146 (502)
Q Consensus        78 ~-----~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~----~~~  146 (502)
                      .     ....+|++.|+|||++..  .++.++|+|||||++|+|++|..||..... .+.+.++.....+...    ...
T Consensus       157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  235 (267)
T cd06610         157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPP-MKVLMLTLQNDPPSLETGADYKK  235 (267)
T ss_pred             cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccCh-hhhHHHHhcCCCCCcCCcccccc
Confidence            2     234578999999998754  488899999999999999999999976433 3444444433222111    123


Q ss_pred             ccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          147 QDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       147 ~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      .+..+++++.+||. +|.+||++.+|+.||||
T Consensus       236 ~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         236 YSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             ccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            46789999999998 99999999999999997


No 162
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95  E-value=3.6e-28  Score=249.73  Aligned_cols=179  Identities=25%  Similarity=0.479  Sum_probs=161.7

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCcee-ccCCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI-LRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~-~~~~~~~   79 (502)
                      |+.||+|--.|++.+++.+..+..|+..|+-||=|||+.|  ||.||||.+||+++.. |+|||+|||+++. +-.....
T Consensus       431 yvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kg--IiYRDLKLDNvmLd~e-GHiKi~DFGmcKEni~~~~TT  507 (683)
T KOG0696|consen  431 YVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDSE-GHIKIADFGMCKENIFDGVTT  507 (683)
T ss_pred             EecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCC--eeeeeccccceEeccC-CceEeeecccccccccCCcce
Confidence            6789999999999999999999999999999999999999  9999999999999987 8999999999985 3455667


Q ss_pred             ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      .+++|||.|+|||++. ..|+.++|+||+||+||||+.|++||.+ .+..++++.|.....  .++...+.++..++..+
T Consensus       508 kTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG-eDE~elF~aI~ehnv--syPKslSkEAv~ickg~  584 (683)
T KOG0696|consen  508 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG-EDEDELFQAIMEHNV--SYPKSLSKEAVAICKGL  584 (683)
T ss_pred             eeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHHccC--cCcccccHHHHHHHHHH
Confidence            8899999999999775 5699999999999999999999999976 888999999988765  56677789999999999


Q ss_pred             hh-CcCCCCC-----HHHHhcCCCCcCCCCCCC
Q 010730          159 LE-NVSKRLP-----AKELLLDPFLASDAGEPL  185 (502)
Q Consensus       159 L~-dP~kRpS-----a~ELL~hPff~~~~~~~l  185 (502)
                      |. .|.+|+.     -.++-.||||+...|..+
T Consensus       585 ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~  617 (683)
T KOG0696|consen  585 LTKHPGKRLGCGPEGERDIREHPFFRRIDWEKL  617 (683)
T ss_pred             hhcCCccccCCCCccccchhhCcchhhccHHHH
Confidence            98 9999986     478999999998777553


No 163
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.95  E-value=8.6e-29  Score=280.40  Aligned_cols=176  Identities=35%  Similarity=0.554  Sum_probs=157.0

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC---
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ---   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~---   77 (502)
                      |+.||+|.+.+...+-.++...+.|..|++.||.|||++|  ||||||||+|||++.+ |.+|++|||-|..+....   
T Consensus      1315 yC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~g--IVHRDIK~aNI~Ld~~-g~iK~~DFGsa~ki~~~~~~~ 1391 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHG--IVHRDIKPANILLDFN-GLIKYGDFGSAVKIKNNAQTM 1391 (1509)
T ss_pred             HhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcC--ceecCCCccceeeecC-CcEEeecccceeEecCchhcC
Confidence            6899999999998888899999999999999999999999  9999999999999988 799999999998876542   


Q ss_pred             --CcccccCCCcccCcccccc----CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHH
Q 010730           78 --QAHSVIGTPEFMAPELYEE----DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEA  151 (502)
Q Consensus        78 --~~~s~vGTp~Y~APEvl~~----~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l  151 (502)
                        .+....|||.|||||++.+    +-..++|||||||++.||+||+.||.+.++.-+|.-++..|..|..... .+++.
T Consensus      1392 ~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~-ls~~g 1470 (1509)
T KOG4645|consen 1392 PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPER-LSSEG 1470 (1509)
T ss_pred             CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchh-hhHhH
Confidence              2356789999999999864    2567899999999999999999999999999899889999988754444 78999


Q ss_pred             HHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          152 RRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       152 ~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      ++||..||. ||.+|-++.|||+|.|-+..
T Consensus      1471 ~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1471 RDFLEHCLEQDPKMRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred             HHHHHHHHhcCchhhhHHHHHHHhhccccc
Confidence            999999998 99999999999999887543


No 164
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.95  E-value=1.9e-27  Score=227.72  Aligned_cols=174  Identities=39%  Similarity=0.653  Sum_probs=148.6

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC--
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ--   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~--   78 (502)
                      |+.+++|.+++.+.+.+++..+..++.|++.||.|||+.+  ++|+||+|+||+++.+ +.+||+|||.+........  
T Consensus        82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~~h~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~~~  158 (260)
T cd06606          82 YVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNG--IVHRDIKGANILVDSD-GVVKLADFGCAKRLGDIETGE  158 (260)
T ss_pred             ecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcCC-CCEEEcccccEEecccccccc
Confidence            4578999999998889999999999999999999999988  9999999999999986 7999999999987765442  


Q ss_pred             -cccccCCCcccCccccccC-CCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHH
Q 010730           79 -AHSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVG  156 (502)
Q Consensus        79 -~~s~vGTp~Y~APEvl~~~-ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~  156 (502)
                       .....++..|+|||.+.+. ++.++||||||+++|+|++|..||....+.......+..+......+...+..+++||.
T Consensus       159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~  238 (260)
T cd06606         159 GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLR  238 (260)
T ss_pred             cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHH
Confidence             3456789999999987654 88999999999999999999999977554555555555433334455556889999999


Q ss_pred             Hhhh-CcCCCCCHHHHhcCCCC
Q 010730          157 KCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       157 kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      +||. +|.+||++.+++.||||
T Consensus       239 ~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         239 KCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             HhCcCChhhCCCHHHHhhCCCC
Confidence            9998 99999999999999997


No 165
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.95  E-value=1.6e-27  Score=234.44  Aligned_cols=174  Identities=30%  Similarity=0.475  Sum_probs=140.3

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~   79 (502)
                      |+.+++|..++.+...+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++..+.... ..
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~~  157 (286)
T cd07847          81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN--CIHRDVKPENILITKQ-GQIKLCDFGFARILTGPGDDY  157 (286)
T ss_pred             ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCChhhEEEcCC-CcEEECccccceecCCCcccc
Confidence            5678888888877778999999999999999999999988  9999999999999876 799999999998765433 23


Q ss_pred             ccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcC--------------------
Q 010730           80 HSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSG--------------------  137 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g--------------------  137 (502)
                      ....++..|+|||++.+  .++.++|||||||++|+|++|..||.+..+...++......                    
T Consensus       158 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T cd07847         158 TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGL  237 (286)
T ss_pred             cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccc
Confidence            34568899999998754  47889999999999999999999998755554444322110                    


Q ss_pred             CCCCc--------ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          138 KLPGA--------FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       138 ~~p~~--------~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      ..+..        .....+..+.+||.+||. +|.+||++.|++.||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         238 SIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             cCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            00000        011236788999999998 99999999999999997


No 166
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.95  E-value=1.3e-27  Score=242.56  Aligned_cols=176  Identities=20%  Similarity=0.422  Sum_probs=136.2

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-C
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-Q   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~   77 (502)
                      |+.+|+|.+++..+  +.+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+++.||+.+...... .
T Consensus        80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--iiH~dlkp~Nil~~~~-~~~~l~~~~~~~~~~~~~~  156 (327)
T cd08227          80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVD-GKVYLSGLRSNLSMINHGQ  156 (327)
T ss_pred             ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCChhhEEEecC-CcEEEcccchhhccccccc
Confidence            57899999999763  45999999999999999999999998  9999999999999876 78999999865433211 1


Q ss_pred             C-------cccccCCCcccCcccccc---CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCC------
Q 010730           78 Q-------AHSVIGTPEFMAPELYEE---DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPG------  141 (502)
Q Consensus        78 ~-------~~s~vGTp~Y~APEvl~~---~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~------  141 (502)
                      .       .....++..|+|||++.+   .|+.++|||||||++|+|++|..||........+... ..+..+.      
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~  235 (327)
T cd08227         157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK-LNGTVPCLLDTTT  235 (327)
T ss_pred             cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHH-hcCCccccccccc
Confidence            0       122356788999998853   4889999999999999999999999764433322222 2221110      


Q ss_pred             --------------------------------------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          142 --------------------------------------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       142 --------------------------------------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                                                            ......++.+++||.+||. ||.+|||++|+|+||||+..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~  313 (327)
T cd08227         236 IPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI  313 (327)
T ss_pred             hhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence                                                  0111235689999999999 99999999999999999753


No 167
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.95  E-value=1.8e-27  Score=238.67  Aligned_cols=176  Identities=33%  Similarity=0.559  Sum_probs=142.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC-c
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-A   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~-~   79 (502)
                      |+.+|+|.+++.+. .+++..+..++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++........ .
T Consensus        97 ~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~--i~H~dL~p~Nili~~~-~~~kl~dfg~~~~~~~~~~~~  172 (296)
T cd06655          97 YLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQ--VIHRDIKSDNVLLGMD-GSVKLTDFGFCAQITPEQSKR  172 (296)
T ss_pred             ecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEEccCccchhcccccccC
Confidence            56899999999764 6899999999999999999999998  9999999999999876 7999999999876543322 2


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ....|++.|+|||.+.+ .++.++|||||||++|+|++|..||........+.........+...+...++.++++|.+|
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  252 (296)
T cd06655         173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRC  252 (296)
T ss_pred             CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHH
Confidence            34578999999998764 48899999999999999999999997744434433332222222223344578899999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcCC
Q 010730          159 LE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      |. +|.+||++.+++.||||+..
T Consensus       253 l~~dp~~Rpt~~~il~~~~~~~~  275 (296)
T cd06655         253 LEMDVEKRGSAKELLQHPFLKLA  275 (296)
T ss_pred             hhcChhhCCCHHHHhhChHhhhc
Confidence            98 99999999999999999754


No 168
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.95  E-value=1.6e-27  Score=234.47  Aligned_cols=176  Identities=31%  Similarity=0.509  Sum_probs=140.8

Q ss_pred             CCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC-CCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            4 SGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHGH-DPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         4 gGsL~~yi~k----~~~L~e~~i~~i~~QIL~gL~YLHs~-g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      .|+|.+++..    ...+++..++.++.||+.||+|||++ +  ++||||||+||+++.+ +.+||+|||++..+.....
T Consensus        83 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~--i~h~dlkp~nil~~~~-~~~kl~dfg~~~~~~~~~~  159 (283)
T cd06617          83 DTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS--VIHRDVKPSNVLINRN-GQVKLCDFGISGYLVDSVA  159 (283)
T ss_pred             cccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCC-CCEEEeecccccccccccc
Confidence            4788888754    24689999999999999999999987 7  9999999999999887 7999999999987644333


Q ss_pred             cccccCCCcccCcccccc-----CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHH
Q 010730           79 AHSVIGTPEFMAPELYEE-----DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARR  153 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~-----~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~  153 (502)
                      .....|+..|+|||++.+     .++.++|+|||||++|+|++|..||.......+.+..+..+..+.......+.++.+
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  239 (283)
T cd06617         160 KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQD  239 (283)
T ss_pred             cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHH
Confidence            334578999999998753     367899999999999999999999976444433344444443332222345788999


Q ss_pred             HHHHhhh-CcCCCCCHHHHhcCCCCcCCCC
Q 010730          154 FVGKCLE-NVSKRLPAKELLLDPFLASDAG  182 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~hPff~~~~~  182 (502)
                      +|.+||. +|.+||++.+++.||||.....
T Consensus       240 li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  269 (283)
T cd06617         240 FVNKCLKKNYKERPNYPELLQHPFFELHLS  269 (283)
T ss_pred             HHHHHccCChhhCcCHHHHhcCchhhhccc
Confidence            9999998 9999999999999999986543


No 169
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.95  E-value=3.1e-27  Score=234.86  Aligned_cols=177  Identities=31%  Similarity=0.491  Sum_probs=142.9

Q ss_pred             CCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CC
Q 010730            1 MFTSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~   78 (502)
                      |+.+|+|..++.+ ...+++..++.++.||+.+|.|||+++  |+||||||+||+++.+ +.+||+|||++...... ..
T Consensus        90 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nili~~~-~~~kl~dfg~~~~~~~~~~~  166 (292)
T cd06644          90 FCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMK--IIHRDLKAGNVLLTLD-GDIKLADFGVSAKNVKTLQR  166 (292)
T ss_pred             cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC--eeecCCCcceEEEcCC-CCEEEccCccceeccccccc
Confidence            5789999988765 456899999999999999999999988  9999999999999876 79999999998754322 22


Q ss_pred             cccccCCCcccCccccc------cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCC-CcccccccHHH
Q 010730           79 AHSVIGTPEFMAPELYE------EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLP-GAFHRIQDAEA  151 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~------~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p-~~~~~~~s~~l  151 (502)
                      .....+++.|+|||++.      ..++.++|||||||++|+|++|..||.. .+..+.+.++.....+ ...+...+..+
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (292)
T cd06644         167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE-LNPMRVLLKIAKSEPPTLSQPSKWSMEF  245 (292)
T ss_pred             cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcc-ccHHHHHHHHhcCCCccCCCCcccCHHH
Confidence            34467899999999873      2367899999999999999999999976 3445555555444332 12233456789


Q ss_pred             HHHHHHhhh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          152 RRFVGKCLE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       152 ~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                      .++|.+||. +|.+||++.++++||||....
T Consensus       246 ~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  276 (292)
T cd06644         246 RDFLKTALDKHPETRPSAAQLLEHPFVSSVT  276 (292)
T ss_pred             HHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence            999999998 999999999999999997543


No 170
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.95  E-value=2e-27  Score=239.31  Aligned_cols=174  Identities=32%  Similarity=0.534  Sum_probs=139.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHG-HDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs-~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++++.+++++..++.++.||+.||.|||+ ++  ++||||||+|||++.+ +.+||+|||++...... ..
T Consensus        80 y~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~-~~  155 (308)
T cd06615          80 HMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHK--IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS-MA  155 (308)
T ss_pred             ccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCC--EEECCCChHHEEEecC-CcEEEccCCCccccccc-cc
Confidence            57899999999998999999999999999999999997 46  9999999999999876 78999999998765332 23


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc----------------------
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS----------------------  136 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~----------------------  136 (502)
                      ...+|++.|+|||++.+ .++.++|+|||||++|+|++|..||... +...+...+..                      
T Consensus       156 ~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (308)
T cd06615         156 NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPP-DAKELEAMFGRPVSEGEAKESHRPVSGHPPDSP  234 (308)
T ss_pred             ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCc-chhhHHHhhcCccccccccCCcccccCCCCCcc
Confidence            45689999999998864 4888999999999999999999999642 22222222211                      


Q ss_pred             --------------CCCCCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          137 --------------GKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       137 --------------g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                                    ...|.......+.++++||.+||. +|.+||++.+++.||||..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~  292 (308)
T cd06615         235 RPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR  292 (308)
T ss_pred             chhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhh
Confidence                          111111112246789999999998 9999999999999999975


No 171
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.95  E-value=1.6e-27  Score=231.04  Aligned_cols=172  Identities=28%  Similarity=0.508  Sum_probs=139.9

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-C
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-Q   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~   78 (502)
                      |+.+++|.+++... ..+++..+..++.||+.||.|||+++  |+|+||||+||+++.+ +.+||+|||++..+.... .
T Consensus        81 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~~-~~~~l~d~g~~~~~~~~~~~  157 (262)
T cd06613          81 YCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG--KIHRDIKGANILLTED-GDVKLADFGVSAQLTATIAK  157 (262)
T ss_pred             CCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCChhhEEECCC-CCEEECccccchhhhhhhhc
Confidence            46789999999876 78999999999999999999999998  9999999999999976 789999999987654322 2


Q ss_pred             cccccCCCcccCcccccc----CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCC---cccccccHHH
Q 010730           79 AHSVIGTPEFMAPELYEE----DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPG---AFHRIQDAEA  151 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~----~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~---~~~~~~s~~l  151 (502)
                      .....++..|+|||++..    .++.++|+|||||++|+|++|..||.+.......+. +....++.   ......+.++
T Consensus       158 ~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  236 (262)
T cd06613         158 RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFL-ISKSNFPPPKLKDKEKWSPVF  236 (262)
T ss_pred             cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhccCCCccccchhhhhHHH
Confidence            344678999999998753    578899999999999999999999987544444333 33232211   1122335789


Q ss_pred             HHHHHHhhh-CcCCCCCHHHHhcCCC
Q 010730          152 RRFVGKCLE-NVSKRLPAKELLLDPF  176 (502)
Q Consensus       152 ~~LI~kcL~-dP~kRpSa~ELL~hPf  176 (502)
                      ++||.+||. +|..||++.+++.|+|
T Consensus       237 ~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         237 HDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HHHHHHHcCCChhhCCCHHHHhcCCC
Confidence            999999998 9999999999999998


No 172
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.95  E-value=1.8e-27  Score=231.33  Aligned_cols=172  Identities=31%  Similarity=0.503  Sum_probs=144.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.|++|.+++.+...+++..+..|+.||+.||.|||.++  |+|+||||+||+++.+ +.++|+|||++..........
T Consensus        81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~-~~~~l~d~~~~~~~~~~~~~~  157 (258)
T cd05578          81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG--IIHRDIKPDNILLDEQ-GHVHITDFNIATKVTPDTLTT  157 (258)
T ss_pred             CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEEcCC-CCEEEeecccccccCCCcccc
Confidence            5789999999988888999999999999999999999998  9999999999999887 799999999987765544445


Q ss_pred             cccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCC--hHHHHHHhhcCCCCCcccccccHHHHHHHHH
Q 010730           81 SVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSN--PAQIYKKVTSGKLPGAFHRIQDAEARRFVGK  157 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~--~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~k  157 (502)
                      ...|+..|+|||++.. .++.++|+||||+++|+|++|..||.....  ..++.......  ....+...+..+.++|.+
T Consensus       158 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~  235 (258)
T cd05578         158 STSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETA--DVLYPATWSTEAIDAINK  235 (258)
T ss_pred             ccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccc--cccCcccCcHHHHHHHHH
Confidence            5678999999998764 478999999999999999999999976543  34444433322  223344457899999999


Q ss_pred             hhh-CcCCCCCH--HHHhcCCCC
Q 010730          158 CLE-NVSKRLPA--KELLLDPFL  177 (502)
Q Consensus       158 cL~-dP~kRpSa--~ELL~hPff  177 (502)
                      ||. +|.+|+++  +|++.||||
T Consensus       236 ~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         236 LLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             HccCChhHcCCccHHHHhcCCCC
Confidence            998 99999999  999999997


No 173
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.95  E-value=2.6e-27  Score=235.66  Aligned_cols=175  Identities=32%  Similarity=0.582  Sum_probs=145.6

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~   79 (502)
                      |+.|++|.+++.. +++++..+..++.||+.||+|||+++  |+||||||+||+++.+ +.++|+|||++....... ..
T Consensus        97 ~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~dl~p~Nil~~~~-~~~~l~d~g~~~~~~~~~~~~  172 (285)
T cd06648          97 FLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQG--VIHRDIKSDSILLTSD-GRVKLSDFGFCAQVSKEVPRR  172 (285)
T ss_pred             ccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChhhEEEcCC-CcEEEcccccchhhccCCccc
Confidence            5689999999987 67999999999999999999999998  9999999999999876 799999999887553322 22


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcc-cccccHHHHHHHHH
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAF-HRIQDAEARRFVGK  157 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~-~~~~s~~l~~LI~k  157 (502)
                      ....|++.|+|||++.+ .++.++|||||||++|+|++|..||.. .++...+.++..+..+... ....+..+.+||.+
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  251 (285)
T cd06648         173 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFN-EPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDR  251 (285)
T ss_pred             ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcC-CCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHH
Confidence            34579999999998764 488999999999999999999999976 4556666666655332211 22256789999999


Q ss_pred             hhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          158 CLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       158 cL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      ||. +|.+||++.++++||||+..
T Consensus       252 ~l~~~p~~Rpt~~~il~~~~~~~~  275 (285)
T cd06648         252 MLVRDPAQRATAAELLNHPFLAKA  275 (285)
T ss_pred             HcccChhhCcCHHHHccCcccccC
Confidence            998 99999999999999999753


No 174
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.95  E-value=1.6e-27  Score=234.67  Aligned_cols=171  Identities=30%  Similarity=0.431  Sum_probs=135.0

Q ss_pred             CCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC-c
Q 010730            4 SGTLREYRKKY---TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-A   79 (502)
Q Consensus         4 gGsL~~yi~k~---~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~-~   79 (502)
                      .|+|.+++...   +.+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++........ .
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~~  158 (285)
T cd07861          82 SMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR--VLHRDLKPQNLLIDNK-GVIKLADFGLARAFGIPVRVY  158 (285)
T ss_pred             CCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEEcCC-CcEEECcccceeecCCCcccc
Confidence            47899998653   46999999999999999999999998  9999999999999876 7999999999876533222 2


Q ss_pred             ccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC------------------
Q 010730           80 HSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL------------------  139 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~------------------  139 (502)
                      ....+++.|+|||++.+  .++.++|||||||++|+|+||.+||.+......++..+.....                  
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
T cd07861         159 THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNT  238 (285)
T ss_pred             cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhh
Confidence            33467899999998754  3788999999999999999999999765444443332211000                  


Q ss_pred             -C-------CcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          140 -P-------GAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       140 -p-------~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                       +       .......+.+++++|.+||. ||.+|||+.+++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         239 FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence             0       00112347788999999999 99999999999999997


No 175
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.95  E-value=1.8e-27  Score=234.52  Aligned_cols=176  Identities=31%  Similarity=0.541  Sum_probs=143.9

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CC
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~   78 (502)
                      |+.+|+|.+++.+. +.+++..++.++.||+.||.|||+.+  |+|+||||+||+++.+ +.++|+|||++...... ..
T Consensus        83 ~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~nili~~~-~~~~l~d~g~~~~~~~~~~~  159 (280)
T cd06611          83 FCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHK--VIHRDLKAGNILLTLD-GDVKLADFGVSAKNKSTLQK  159 (280)
T ss_pred             ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEECCC-CCEEEccCccchhhcccccc
Confidence            57899999999774 56999999999999999999999998  9999999999999876 79999999998654322 22


Q ss_pred             cccccCCCcccCccccc------cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCC-cccccccHHH
Q 010730           79 AHSVIGTPEFMAPELYE------EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPG-AFHRIQDAEA  151 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~------~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~-~~~~~~s~~l  151 (502)
                      .....||+.|+|||++.      ..++.++|+|||||++|+|++|..||... +..+...++..+..+. ..+...+.++
T Consensus       160 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (280)
T cd06611         160 RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHEL-NPMRVLLKILKSEPPTLDQPSKWSSSF  238 (280)
T ss_pred             cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccC-CHHHHHHHHhcCCCCCcCCcccCCHHH
Confidence            23457899999999874      23677899999999999999999999764 4445555555554331 2233457889


Q ss_pred             HHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          152 RRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       152 ~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      .++|.+||. +|.+||++.++|+||||...
T Consensus       239 ~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         239 NDFLKSCLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             HHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence            999999998 99999999999999999743


No 176
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95  E-value=7.5e-28  Score=222.06  Aligned_cols=159  Identities=26%  Similarity=0.314  Sum_probs=128.1

Q ss_pred             CcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCccccc
Q 010730            5 GTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVI   83 (502)
Q Consensus         5 GsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~v   83 (502)
                      |+|.+++.+. +++++..++.|+.||+.||.|||+++        ||+|||++.+ +.+|+  ||++.......    ..
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--------kp~Nil~~~~-~~~~~--fG~~~~~~~~~----~~   65 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA--------KSGNILLTWD-GLLKL--DGSVAFKTPEQ----SR   65 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC--------CcccEeEcCc-cceee--ccceEeecccc----CC
Confidence            8999999874 56999999999999999999999875        9999999877 78888  99998764322    36


Q ss_pred             CCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCc-----ccccccH--HHHHHH
Q 010730           84 GTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGA-----FHRIQDA--EARRFV  155 (502)
Q Consensus        84 GTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~-----~~~~~s~--~l~~LI  155 (502)
                      ||+.|||||++.+ .|+.++|||||||++|+|+||..||.........+..+..+..+..     .....+.  .++++|
T Consensus        66 g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  145 (176)
T smart00750       66 VDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFM  145 (176)
T ss_pred             CcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHH
Confidence            8999999998864 5899999999999999999999999765444445555443332211     1111222  689999


Q ss_pred             HHhhh-CcCCCCCHHHHhcCCCCc
Q 010730          156 GKCLE-NVSKRLPAKELLLDPFLA  178 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL~hPff~  178 (502)
                      .+||. +|.+||++.|++.|+|+.
T Consensus       146 ~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      146 RVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHhcccccccCHHHHHHHHHHH
Confidence            99999 999999999999999875


No 177
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.95  E-value=2.8e-27  Score=231.55  Aligned_cols=173  Identities=29%  Similarity=0.534  Sum_probs=144.5

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC----
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS----   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~----   76 (502)
                      |+.+|+|.+++.+.+.+++..++.++.||+.||.|||+++  |+|+||||+||+++.+ +.++|+|||++......    
T Consensus        87 ~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~~~~~~  163 (264)
T cd06653          87 YMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNM--IVHRDIKGANILRDSA-GNVKLGDFGASKRIQTICMSG  163 (264)
T ss_pred             eCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCC-CCEEECccccccccccccccC
Confidence            4678999999998888999999999999999999999998  9999999999999876 78999999999765321    


Q ss_pred             CCcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHH
Q 010730           77 QQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFV  155 (502)
Q Consensus        77 ~~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI  155 (502)
                      .......|++.|+|||++.+ .++.++|+|||||++|+|++|..||.+......+.+.. ....+..++...+..++++|
T Consensus       164 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~i  242 (264)
T cd06653         164 TGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIA-TQPTKPMLPDGVSDACRDFL  242 (264)
T ss_pred             ccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHH-cCCCCCCCCcccCHHHHHHH
Confidence            11234578999999998864 47889999999999999999999998754445444433 33333445666778999999


Q ss_pred             HHhhhCcCCCCCHHHHhcCCCC
Q 010730          156 GKCLENVSKRLPAKELLLDPFL  177 (502)
Q Consensus       156 ~kcL~dP~kRpSa~ELL~hPff  177 (502)
                      .+||.++.+||++.++|.|||+
T Consensus       243 ~~~l~~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         243 KQIFVEEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             HHHhcCcccCccHHHHhcCCCC
Confidence            9999988999999999999985


No 178
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=99.95  E-value=1.5e-27  Score=235.51  Aligned_cols=177  Identities=26%  Similarity=0.447  Sum_probs=145.3

Q ss_pred             CCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKYT--RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~--~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++.+.+  .+++..++.++.||+.||.|||..+  |+||||||+||+++.+ +.+||+|||++........
T Consensus        74 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~Nil~~~~-~~~~l~dfg~~~~~~~~~~  150 (277)
T cd05577          74 LMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR--IVYRDLKPENVLLDDH-GNVRISDLGLAVELKGGKK  150 (277)
T ss_pred             cCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCC-CCEEEccCcchhhhccCCc
Confidence            578999999998765  7999999999999999999999998  9999999999999876 7999999999876654444


Q ss_pred             cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCC---hHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSN---PAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~---~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      .....++..|+|||++.+ .++.++|||||||++|+|++|..||.....   ..++.+.+...  +...+...++.++++
T Consensus       151 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l  228 (277)
T cd05577         151 IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEM--AVEYPDKFSPEAKDL  228 (277)
T ss_pred             cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccc--cccCCccCCHHHHHH
Confidence            445678899999998754 488899999999999999999999965322   23343333322  223444558899999


Q ss_pred             HHHhhh-CcCCCC-----CHHHHhcCCCCcCCCC
Q 010730          155 VGKCLE-NVSKRL-----PAKELLLDPFLASDAG  182 (502)
Q Consensus       155 I~kcL~-dP~kRp-----Sa~ELL~hPff~~~~~  182 (502)
                      |.+||. +|.+||     ++.+++.||||....+
T Consensus       229 i~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~  262 (277)
T cd05577         229 CEALLQKDPEKRLGCRGGSADEVREHPLFKDLNW  262 (277)
T ss_pred             HHHHccCChhHccCCCcccHHHHHhChhhhcCCh
Confidence            999998 999999     8999999999976544


No 179
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.95  E-value=4.1e-27  Score=228.21  Aligned_cols=172  Identities=31%  Similarity=0.523  Sum_probs=146.9

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-   77 (502)
                      |+.+|+|.+++.+.  ..+++..+..++.|++.||.|||+.+  ++|+||||+||+++.+ +.+||+|||++....... 
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~ni~~~~~-~~~kl~d~~~~~~~~~~~~  156 (256)
T cd08221          80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG--ILHRDIKTLNIFLTKA-GLIKLGDFGISKILGSEYS  156 (256)
T ss_pred             ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChHhEEEeCC-CCEEECcCcceEEcccccc
Confidence            57899999999875  46899999999999999999999988  9999999999999987 789999999998764433 


Q ss_pred             CcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHH
Q 010730           78 QAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVG  156 (502)
Q Consensus        78 ~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~  156 (502)
                      ......|++.|+|||++.+ .++.++|+||||+++|+|++|..||.. .+..++...+..+.++.. ....+..+.++|.
T Consensus       157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~  234 (256)
T cd08221         157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDA-TNPLNLVVKIVQGNYTPV-VSVYSSELISLVH  234 (256)
T ss_pred             cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHcCCCCCC-ccccCHHHHHHHH
Confidence            3345679999999998754 478899999999999999999999976 566677777776665432 3455788999999


Q ss_pred             Hhhh-CcCCCCCHHHHhcCCCC
Q 010730          157 KCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       157 kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      +||. +|.+||+++++|+|||+
T Consensus       235 ~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         235 SLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             HHcccCcccCCCHHHHhhCcCC
Confidence            9998 99999999999999986


No 180
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.95  E-value=1.7e-27  Score=235.60  Aligned_cols=163  Identities=28%  Similarity=0.469  Sum_probs=132.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhC-CCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccccCCCcccCcc
Q 010730           14 YTRVDIRAVKNWARQILRGIAYLHGH-DPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPE   92 (502)
Q Consensus        14 ~~~L~e~~i~~i~~QIL~gL~YLHs~-g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~vGTp~Y~APE   92 (502)
                      .+.+++..+..++.||+.||+|||+. +  |+||||||+||+++.+ +.+||+|||++..+..........|++.|+|||
T Consensus       101 ~~~l~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE  177 (288)
T cd06616         101 KSVIPEEILGKIAVATVKALNYLKEELK--IIHRDVKPSNILLDRN-GNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPE  177 (288)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhhcCC--eeccCCCHHHEEEccC-CcEEEeecchhHHhccCCccccccCccCccCHH
Confidence            46799999999999999999999974 7  9999999999999876 789999999997665443334457899999999


Q ss_pred             cccc----CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCc---ccccccHHHHHHHHHhhh-CcCC
Q 010730           93 LYEE----DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGA---FHRIQDAEARRFVGKCLE-NVSK  164 (502)
Q Consensus        93 vl~~----~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~---~~~~~s~~l~~LI~kcL~-dP~k  164 (502)
                      ++..    .++.++|||||||++|+|++|..||.......+...++..+..+..   .+...+.++.+||.+||. +|.+
T Consensus       178 ~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~  257 (288)
T cd06616         178 RIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESK  257 (288)
T ss_pred             HhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhh
Confidence            8864    4889999999999999999999999765433333333333333221   222357889999999998 9999


Q ss_pred             CCCHHHHhcCCCCcC
Q 010730          165 RLPAKELLLDPFLAS  179 (502)
Q Consensus       165 RpSa~ELL~hPff~~  179 (502)
                      |||+++++.||||+.
T Consensus       258 Rpt~~~i~~~~~~~~  272 (288)
T cd06616         258 RPKYKELLEHPFIKD  272 (288)
T ss_pred             CcCHHHHhcChhhhc
Confidence            999999999999974


No 181
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.95  E-value=1.7e-27  Score=255.89  Aligned_cols=173  Identities=32%  Similarity=0.484  Sum_probs=136.6

Q ss_pred             CCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC---c
Q 010730            4 SGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ---A   79 (502)
Q Consensus         4 gGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~---~   79 (502)
                      .|+|.+++.+. +.+++..++.|+.||+.||.|||+++  ||||||||+|||++.+ +.+||+|||+++.+.....   .
T Consensus       243 ~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g--IvHrDLKP~NILl~~~-~~vkL~DFGla~~~~~~~~~~~~  319 (461)
T PHA03211        243 RSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG--IIHRDIKTENVLVNGP-EDICLGDFGAACFARGSWSTPFH  319 (461)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EEECcCCHHHEEECCC-CCEEEcccCCceecccccccccc
Confidence            57899998764 56999999999999999999999998  9999999999999876 7899999999987643221   2


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCC-------ChHHHHHHhhcCCCC-----C-----
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECS-------NPAQIYKKVTSGKLP-----G-----  141 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~-------~~~ql~~kI~~g~~p-----~-----  141 (502)
                      ....||+.|+|||++.+ .++.++|||||||++|||++|..|+....       ...++.+.+......     .     
T Consensus       320 ~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~  399 (461)
T PHA03211        320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSR  399 (461)
T ss_pred             cccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchH
Confidence            34679999999998864 48999999999999999999886653321       134455544432211     0     


Q ss_pred             --------------------ccc--ccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          142 --------------------AFH--RIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       142 --------------------~~~--~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                                          .|.  ...+..+++||.+||. ||.+|||+.|||+||||+.
T Consensus       400 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        400 LVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             HHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence                                010  0234678999999999 9999999999999999964


No 182
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.95  E-value=1.6e-27  Score=232.87  Aligned_cols=172  Identities=28%  Similarity=0.495  Sum_probs=138.1

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~   79 (502)
                      |+.+|+|.+++.+.+.+++..+..++.||+.||.|||+.+  |+||||||+||+++.+ +.+||+|||++..+.... ..
T Consensus        87 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nill~~~-~~~~l~dfg~~~~~~~~~~~~  163 (267)
T cd06646          87 YCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKG--KMHRDIKGANILLTDN-GDVKLADFGVAAKITATIAKR  163 (267)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCC-CCEEECcCccceeeccccccc
Confidence            5688999999988888999999999999999999999988  9999999999999876 789999999998764322 23


Q ss_pred             ccccCCCcccCccccc----cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC-CCcc--cccccHHHH
Q 010730           80 HSVIGTPEFMAPELYE----EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL-PGAF--HRIQDAEAR  152 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~----~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~-p~~~--~~~~s~~l~  152 (502)
                      ....|++.|+|||++.    ..++.++|+|||||++|+|++|..||.......... .+....+ +..+  ....+..+.
T Consensus       164 ~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  242 (267)
T cd06646         164 KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-LMSKSNFQPPKLKDKTKWSSTFH  242 (267)
T ss_pred             CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe-eeecCCCCCCCCccccccCHHHH
Confidence            3467899999999873    337789999999999999999999996543322222 2222222 1111  122467899


Q ss_pred             HHHHHhhh-CcCCCCCHHHHhcCCC
Q 010730          153 RFVGKCLE-NVSKRLPAKELLLDPF  176 (502)
Q Consensus       153 ~LI~kcL~-dP~kRpSa~ELL~hPf  176 (502)
                      +||.+||. +|.+||+++++|+|+|
T Consensus       243 ~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         243 NFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             HHHHHHhhCChhhCcCHHHHhcCCC
Confidence            99999998 9999999999999987


No 183
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core 
Probab=99.95  E-value=3.9e-27  Score=224.56  Aligned_cols=172  Identities=33%  Similarity=0.612  Sum_probs=140.9

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+++|.+++... +.+++..+..++.||+.+|.|||..+  ++|+||+|+||+++.+ +.++|+|||.+.........
T Consensus        78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--i~h~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~~  154 (253)
T cd05122          78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG--IIHRDIKAANILLTSD-GEVKLIDFGLSAQLSDTKAR  154 (253)
T ss_pred             cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC--EecCCCCHHHEEEccC-CeEEEeeccccccccccccc
Confidence            56789999999876 68999999999999999999999988  9999999999999986 79999999999876544323


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcc-cccccHHHHHHHHH
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAF-HRIQDAEARRFVGK  157 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~-~~~~s~~l~~LI~k  157 (502)
                      ....|+..|+|||++.+ .++.++|+||||+++|+|++|..||........+..... ...+... ....+..+.++|.+
T Consensus       155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~  233 (253)
T cd05122         155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPPGLRNPEKWSDEFKDFLKK  233 (253)
T ss_pred             cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCCCcCcccccCHHHHHHHHH
Confidence            45678999999998754 478899999999999999999999976544344333332 2222221 11226789999999


Q ss_pred             hhh-CcCCCCCHHHHhcCCC
Q 010730          158 CLE-NVSKRLPAKELLLDPF  176 (502)
Q Consensus       158 cL~-dP~kRpSa~ELL~hPf  176 (502)
                      ||. +|.+|||+.++|.|||
T Consensus       234 ~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         234 CLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             HccCChhhCCCHHHHhcCCC
Confidence            998 9999999999999998


No 184
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.95  E-value=2.7e-27  Score=233.17  Aligned_cols=169  Identities=23%  Similarity=0.360  Sum_probs=142.0

Q ss_pred             CCCCCcHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEE
Q 010730            1 MFTSGTLREYRKKY----------------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKI   64 (502)
Q Consensus         1 ~~tgGsL~~yi~k~----------------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL   64 (502)
                      |+.+|+|.+++.+.                ..+++..+..++.||+.||.|||+.+  |+||||||+||+++.+ +.+||
T Consensus        89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nil~~~~-~~~~L  165 (283)
T cd05048          89 YLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH--FVHRDLAARNCLVGEG-LTVKI  165 (283)
T ss_pred             cCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccccceEEEcCC-CcEEE
Confidence            56789999999865                45888999999999999999999998  9999999999999876 78999


Q ss_pred             EecCCceeccCCC---CcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCC
Q 010730           65 GDLGLAAILRGSQ---QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKL  139 (502)
Q Consensus        65 ~DFGlA~~~~~~~---~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~  139 (502)
                      +|||++.......   ......+++.|+|||++. +.++.++|||||||++|+|++ |..||.+ ....+++..+..+..
T Consensus       166 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~-~~~~~~~~~i~~~~~  244 (283)
T cd05048         166 SDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYG-FSNQEVIEMIRSRQL  244 (283)
T ss_pred             CCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHcCCc
Confidence            9999997653321   123456788999999765 568999999999999999998 9999976 456677888777665


Q ss_pred             CCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          140 PGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       140 p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      +. .+...+.++.+|+.+||. +|.+||++.|++++
T Consensus       245 ~~-~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         245 LP-CPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             CC-CcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            43 344567899999999999 99999999999875


No 185
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=99.95  E-value=4.1e-27  Score=234.02  Aligned_cols=176  Identities=26%  Similarity=0.396  Sum_probs=139.2

Q ss_pred             CCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-C
Q 010730            1 MFTSGTLREYRKKYT-RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-Q   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~-~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~   78 (502)
                      |+ +|+|.+++.... .+++..++.++.||+.||.|||+++  |+|+||||+||+++.+ +.+||+|||++....... .
T Consensus        83 ~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nill~~~-~~~~l~dfg~~~~~~~~~~~  158 (298)
T cd07841          83 FM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW--ILHRDLKPNNLLIASD-GVLKLADFGLARSFGSPNRK  158 (298)
T ss_pred             cc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCChhhEEEcCC-CCEEEccceeeeeccCCCcc
Confidence            45 899999998766 7999999999999999999999998  9999999999999986 799999999998765432 2


Q ss_pred             cccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcC-CCC--C------------
Q 010730           79 AHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSG-KLP--G------------  141 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g-~~p--~------------  141 (502)
                      .....+++.|+|||++.+  .++.++|||||||++|+|++|.+||....... .+.++... ..+  .            
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (298)
T cd07841         159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID-QLGKIFEALGTPTEENWPGVTSLPDYV  237 (298)
T ss_pred             ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH-HHHHHHHHcCCCchhhhhhcccccccc
Confidence            334467889999998743  47889999999999999999988876543332 23332210 000  0            


Q ss_pred             -----------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          142 -----------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       142 -----------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                                 ......+..+.++|.+||. +|.+|||++|+|.||||+...
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~  289 (298)
T cd07841         238 EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP  289 (298)
T ss_pred             cccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCC
Confidence                       0012235788999999999 999999999999999998654


No 186
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.95  E-value=3.8e-27  Score=233.13  Aligned_cols=172  Identities=26%  Similarity=0.512  Sum_probs=138.4

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.+|+|..+    ..+++..+..++.||+.||.|||+.+  |+|+||||+||+++.+ +.+||+|||++..+... ...
T Consensus        80 ~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nill~~~-~~~~l~dfg~~~~~~~~-~~~  151 (279)
T cd06619          80 FMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLK--ILHRDVKPSNMLVNTR-GQVKLCDFGVSTQLVNS-IAK  151 (279)
T ss_pred             cCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCCHHHEEECCC-CCEEEeeCCcceecccc-ccc
Confidence            5778888765    35789999999999999999999998  9999999999999887 79999999999765432 234


Q ss_pred             cccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCC------ChHHHHHHhhcCCCCCcccccccHHHHH
Q 010730           81 SVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECS------NPAQIYKKVTSGKLPGAFHRIQDAEARR  153 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~------~~~ql~~kI~~g~~p~~~~~~~s~~l~~  153 (502)
                      ..+||+.|+|||++.+ .++.++|+|||||++|+|++|..||....      ....+.+.+.....+.......++++++
T Consensus       152 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (279)
T cd06619         152 TYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVH  231 (279)
T ss_pred             CCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHH
Confidence            4689999999998754 58899999999999999999999996421      1223333333333322223345788999


Q ss_pred             HHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          154 FVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      +|.+||. +|.+||+++|++.||||+..
T Consensus       232 li~~~l~~~P~~Rp~~~eil~~~~~~~~  259 (279)
T cd06619         232 FITQCMRKQPKERPAPENLMDHPFIVQY  259 (279)
T ss_pred             HHHHHhhCChhhCCCHHHHhcCcccccc
Confidence            9999998 99999999999999999754


No 187
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.95  E-value=3.6e-27  Score=231.92  Aligned_cols=174  Identities=27%  Similarity=0.428  Sum_probs=136.9

Q ss_pred             CCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC--
Q 010730            1 MFTSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ--   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~--   77 (502)
                      |+ +++|.+++.. .+.+++..++.++.||+.||.|||+++  |+|+||||+||+++.+ +.++|+|||++.......  
T Consensus        80 ~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~~~~~-~~~~l~dfg~~~~~~~~~~~  155 (286)
T cd07832          80 YM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG--IMHRDLKPANLLISAD-GVLKIADFGLARLFSEEEPR  155 (286)
T ss_pred             cc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCHHHEEEcCC-CcEEEeeeeecccccCCCCC
Confidence            45 9999999975 456999999999999999999999998  9999999999999986 789999999998764332  


Q ss_pred             CcccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC----------------
Q 010730           78 QAHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL----------------  139 (502)
Q Consensus        78 ~~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~----------------  139 (502)
                      ......|++.|+|||++.+  .++.++|||||||++|+|++|.+||.+..+...+...+..-..                
T Consensus       156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T cd07832         156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYN  235 (286)
T ss_pred             ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhh
Confidence            1334678999999998753  3689999999999999999998888664433332222211000                


Q ss_pred             ----CC-------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCc
Q 010730          140 ----PG-------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLA  178 (502)
Q Consensus       140 ----p~-------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~  178 (502)
                          +.       ......+..+.++|.+||. +|.+||+++++|.||||.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         236 KITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             cccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence                00       0011235789999999999 999999999999999983


No 188
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.95  E-value=5.4e-27  Score=227.64  Aligned_cols=173  Identities=39%  Similarity=0.657  Sum_probs=142.7

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC--
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ--   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~--   78 (502)
                      |+.+++|.+++.+.+.+++..++.++.||+.||.|||+.+  |+|+||||+||+++.+ +.+||+|||++........  
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~~~nil~~~~-~~~kl~d~g~~~~~~~~~~~~  156 (264)
T cd06626          80 YCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHG--IVHRDIKPANIFLDHN-GVIKLGDFGCAVKLKNNTTTM  156 (264)
T ss_pred             cCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEEcccccccccCCCCCcc
Confidence            5678999999998888999999999999999999999998  9999999999999886 7999999999977643222  


Q ss_pred             ---cccccCCCcccCccccccC----CCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCccccc--ccH
Q 010730           79 ---AHSVIGTPEFMAPELYEED----YNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRI--QDA  149 (502)
Q Consensus        79 ---~~s~vGTp~Y~APEvl~~~----ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~--~s~  149 (502)
                         .....+++.|+|||++.+.    +..++||||||+++|+|++|..||....+...+...+..+..+ .++..  .+.
T Consensus       157 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  235 (264)
T cd06626         157 GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKP-PIPDSLQLSP  235 (264)
T ss_pred             cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCC-CCCcccccCH
Confidence               1235688999999987532    6889999999999999999999997655544444444443322 22222  378


Q ss_pred             HHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          150 EARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       150 ~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      .+.++|.+||. +|.+||++.+++.|||+
T Consensus       236 ~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         236 EGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            89999999998 99999999999999996


No 189
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.95  E-value=3.2e-27  Score=236.80  Aligned_cols=176  Identities=23%  Similarity=0.455  Sum_probs=139.1

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++.+.  ..+++..++.++.||+.||+|||+++  |+||||||+||+++.+ +.+||+|||.+........
T Consensus        80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~--ivH~dlk~~Nili~~~-~~~kl~d~~~~~~~~~~~~  156 (314)
T cd08216          80 LMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG--FIHRSVKASHILLSGD-GKVVLSGLRYSVSMIKHGK  156 (314)
T ss_pred             ccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCcceEEEecC-CceEEecCccceeeccccc
Confidence            57889999999864  46899999999999999999999998  9999999999999976 7999999998865432111


Q ss_pred             --------cccccCCCcccCcccccc---CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC--------
Q 010730           79 --------AHSVIGTPEFMAPELYEE---DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL--------  139 (502)
Q Consensus        79 --------~~s~vGTp~Y~APEvl~~---~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~--------  139 (502)
                              .....++..|+|||++..   .|+.++|||||||++|+|++|..||........+..++.....        
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (314)
T cd08216         157 RQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTY  236 (314)
T ss_pred             cccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCch
Confidence                    133457889999998854   4889999999999999999999999875554444444321110        


Q ss_pred             C-----------------------CcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          140 P-----------------------GAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       140 p-----------------------~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                      +                       .......+.++.+||.+||. +|.+|||++++|.||||+.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~  300 (314)
T cd08216         237 PLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQ  300 (314)
T ss_pred             hhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhh
Confidence            0                       00011124578899999998 9999999999999999974


No 190
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.95  E-value=4.7e-27  Score=235.67  Aligned_cols=179  Identities=26%  Similarity=0.431  Sum_probs=146.5

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC----
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS----   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~----   76 (502)
                      |+.||+|.++++..+.+++..+..++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||+++.....    
T Consensus        82 ~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~NIll~~~-~~~~l~dfg~~~~~~~~~~~~  158 (305)
T cd05609          82 YVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYG--IVHRDLKPDNLLITSM-GHIKLTDFGLSKIGLMSLTTN  158 (305)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHEEECCC-CCEEEeeCCCccccCcCcccc
Confidence            5789999999998888999999999999999999999998  9999999999999876 79999999998642100    


Q ss_pred             ------------CCcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCc-
Q 010730           77 ------------QQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGA-  142 (502)
Q Consensus        77 ------------~~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~-  142 (502)
                                  .......|++.|+|||.+. ..++.++|+|||||++|+|++|..||.+ ....+++..+..+..+.. 
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~-~~~~~~~~~~~~~~~~~~~  237 (305)
T cd05609         159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG-DTPEELFGQVISDDIEWPE  237 (305)
T ss_pred             ccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhcccCCCC
Confidence                        0012346788999999764 4589999999999999999999999976 456677777665543221 


Q ss_pred             ccccccHHHHHHHHHhhh-CcCCCCC---HHHHhcCCCCcCCCCC
Q 010730          143 FHRIQDAEARRFVGKCLE-NVSKRLP---AKELLLDPFLASDAGE  183 (502)
Q Consensus       143 ~~~~~s~~l~~LI~kcL~-dP~kRpS---a~ELL~hPff~~~~~~  183 (502)
                      .....+.+++++|.+||. +|.+||+   +.++|.||||......
T Consensus       238 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~  282 (305)
T cd05609         238 GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWN  282 (305)
T ss_pred             ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHH
Confidence            122457889999999999 9999998   8999999999765443


No 191
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.95  E-value=1.8e-27  Score=230.69  Aligned_cols=165  Identities=23%  Similarity=0.350  Sum_probs=135.4

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.||+|.+++.+...+++..+..++.||+.||+|||..+  |+||||||+||+++.+ +.++++|||++..+...  ..
T Consensus        66 ~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nil~~~~-~~~~l~df~~~~~~~~~--~~  140 (237)
T cd05576          66 HAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREG--IVCRDLNPNNILLDDR-GHIQLTYFSRWSEVEDS--CD  140 (237)
T ss_pred             cCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcCC-CCEEEecccchhccccc--cc
Confidence            5789999999988888999999999999999999999988  9999999999999987 78999999987655432  23


Q ss_pred             cccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhh
Q 010730           81 SVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCL  159 (502)
Q Consensus        81 s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL  159 (502)
                      ...++..|+|||++. ..++.++|+||+||++|+|++|..|+.....  .+.     ......++...+..++++|.+||
T Consensus       141 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~li~~~l  213 (237)
T cd05576         141 GEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPS--GIN-----THTTLNIPEWVSEEARSLLQQLL  213 (237)
T ss_pred             cCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCch--hcc-----cccccCCcccCCHHHHHHHHHHc
Confidence            345678899999886 4588899999999999999999988754211  111     01111233445788999999999


Q ss_pred             h-CcCCCCCH-----HHHhcCCCC
Q 010730          160 E-NVSKRLPA-----KELLLDPFL  177 (502)
Q Consensus       160 ~-dP~kRpSa-----~ELL~hPff  177 (502)
                      . ||.+|+++     .+++.||||
T Consensus       214 ~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         214 QFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             cCCHHHhcCCCccchHHHHcCCCC
Confidence            8 99999985     999999997


No 192
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.95  E-value=2.2e-27  Score=237.88  Aligned_cols=176  Identities=34%  Similarity=0.572  Sum_probs=142.6

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC-c
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-A   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~-~   79 (502)
                      |+.+|+|.+++.+ ..+++..+..++.||+.||.|||+.+  |+||||||+||+++.+ +.+||+|||++........ .
T Consensus        97 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~--i~H~dL~p~Nili~~~-~~~~l~Dfg~~~~~~~~~~~~  172 (297)
T cd06656          97 YLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQ--VIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKR  172 (297)
T ss_pred             ccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEECcCccceEccCCccCc
Confidence            5789999999965 46899999999999999999999998  9999999999999876 7999999999976543322 2


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ....|++.|+|||.+.+ .++.++|+|||||++|+|++|..||........++.....+..+...+...+..+++||.+|
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  252 (297)
T cd06656         173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRC  252 (297)
T ss_pred             CcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHH
Confidence            34578999999998764 48899999999999999999999997644333333332223222233444577899999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcCC
Q 010730          159 LE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      |. +|.+||+++++|.||||+..
T Consensus       253 l~~~p~~Rps~~~il~~~~~~~~  275 (297)
T cd06656         253 LEMDVDRRGSAKELLQHPFLKLA  275 (297)
T ss_pred             ccCChhhCcCHHHHhcCchhccc
Confidence            98 99999999999999999743


No 193
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.95  E-value=4.3e-27  Score=231.08  Aligned_cols=176  Identities=31%  Similarity=0.547  Sum_probs=142.5

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~   79 (502)
                      |+.+++|.+++.. +.+++..+..++.||+.||.|||+.+  |+|+||+|+||+++.+ +.++|+|||++....... ..
T Consensus        83 ~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06917          83 YAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVG--VIHRDIKAANILVTNT-GNVKLCDFGVAALLNQNSSKR  158 (277)
T ss_pred             cCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHHEEEcCC-CCEEEccCCceeecCCCcccc
Confidence            5789999999976 47999999999999999999999998  9999999999999986 799999999998765432 23


Q ss_pred             ccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHH
Q 010730           80 HSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGK  157 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~k  157 (502)
                      ....|++.|+|||.+.+  .++.++|+|||||++|+|++|..||.+. ........+.....+.......+.++.+++.+
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  237 (277)
T cd06917         159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDV-DAFRAMMLIPKSKPPRLEDNGYSKLLREFVAA  237 (277)
T ss_pred             ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCC-ChhhhhhccccCCCCCCCcccCCHHHHHHHHH
Confidence            44579999999998753  3688999999999999999999999763 33333333333322222222256789999999


Q ss_pred             hhh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          158 CLE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       158 cL~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                      ||. +|.+||++.+++.||||+...
T Consensus       238 ~l~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         238 CLDEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             HcCCCcccCcCHHHHhhChHhhccc
Confidence            998 999999999999999997543


No 194
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.95  E-value=2.1e-27  Score=271.25  Aligned_cols=178  Identities=26%  Similarity=0.440  Sum_probs=147.2

Q ss_pred             CCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCeEecCCCCCcEEEeCC-------------
Q 010730            1 MFTSGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHGHD-----PPVIHRDLKCDNIFVNGH-------------   58 (502)
Q Consensus         1 ~~tgGsL~~yi~k----~~~L~e~~i~~i~~QIL~gL~YLHs~g-----~~IIHRDLKPeNILl~~~-------------   58 (502)
                      |+.+|+|.++|.+    .+.+++..++.|+.||+.||.|||..+     .+||||||||+|||++..             
T Consensus        95 Y~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n  174 (1021)
T PTZ00266         95 FCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANN  174 (1021)
T ss_pred             CCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccc
Confidence            6789999999975    357999999999999999999999854     359999999999999632             


Q ss_pred             ---CCcEEEEecCCceeccCCCCcccccCCCcccCccccc---cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHH
Q 010730           59 ---LGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYE---EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYK  132 (502)
Q Consensus        59 ---~g~vKL~DFGlA~~~~~~~~~~s~vGTp~Y~APEvl~---~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~  132 (502)
                         .+.+||+|||++..+.........+||+.|+|||++.   ..++.++||||||||||+|+||..||.......++..
T Consensus       175 ~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~  254 (1021)
T PTZ00266        175 LNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLIS  254 (1021)
T ss_pred             cCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHH
Confidence               2358999999998765444455678999999999874   2488999999999999999999999987667777777


Q ss_pred             HhhcCCCCCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          133 KVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       133 kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      .+..+...  .....+..+.+||..||. +|.+||++.|+|.|||++..
T Consensus       255 ~lk~~p~l--pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        255 ELKRGPDL--PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             HHhcCCCC--CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence            66654321  112347889999999999 99999999999999999643


No 195
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.95  E-value=4.9e-27  Score=230.46  Aligned_cols=169  Identities=24%  Similarity=0.368  Sum_probs=134.9

Q ss_pred             CCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccc
Q 010730            4 SGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSV   82 (502)
Q Consensus         4 gGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~   82 (502)
                      +|+|.+++... +.+++..++.++.||+.||.|||+.+  |+||||||+||+++.  +.+||+|||++..+.........
T Consensus        83 ~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~p~ni~l~~--~~~kl~dfg~~~~~~~~~~~~~~  158 (282)
T cd07831          83 DMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG--IFHRDIKPENILIKD--DILKLADFGSCRGIYSKPPYTEY  158 (282)
T ss_pred             CccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEcC--CCeEEEecccccccccCCCcCCC
Confidence            46888888763 57899999999999999999999998  999999999999987  79999999999876544444456


Q ss_pred             cCCCcccCccccc--cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc---------------C-----CCC
Q 010730           83 IGTPEFMAPELYE--EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS---------------G-----KLP  140 (502)
Q Consensus        83 vGTp~Y~APEvl~--~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~---------------g-----~~p  140 (502)
                      .+++.|+|||++.  +.++.++|||||||++|+|++|..||.+. +....+..+..               .     ..+
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (282)
T cd07831         159 ISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGT-NELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFP  237 (282)
T ss_pred             CCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCC-CHHHHHHHHHHHcCCCCHHHHHhhcccccccccCc
Confidence            7899999999763  34788999999999999999999999763 33332222211               0     000


Q ss_pred             Cc-------ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          141 GA-------FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       141 ~~-------~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      ..       +....+..+.++|.+||. +|.+||++.++|.||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         238 SKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             ccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            00       011346889999999999 99999999999999997


No 196
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.95  E-value=4.7e-27  Score=234.89  Aligned_cols=174  Identities=24%  Similarity=0.421  Sum_probs=136.3

Q ss_pred             CCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cccc
Q 010730            4 SGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QAHS   81 (502)
Q Consensus         4 gGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~~s   81 (502)
                      +|+|.+++.+. ..+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++....... ....
T Consensus        87 ~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--i~H~dlkp~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~  163 (301)
T cd07873          87 DKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK--VLHRDLKPQNLLINER-GELKLADFGLARAKSIPTKTYSN  163 (301)
T ss_pred             ccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHHHEEECCC-CcEEECcCcchhccCCCCCcccc
Confidence            47899998764 56899999999999999999999998  9999999999999876 799999999987643222 2234


Q ss_pred             ccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc---CC------------------
Q 010730           82 VIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS---GK------------------  138 (502)
Q Consensus        82 ~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~---g~------------------  138 (502)
                      ..+++.|+|||++.+  .++.++|||||||++|+|++|.+||...... +....+..   ..                  
T Consensus       164 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (301)
T cd07873         164 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE-EQLHFIFRILGTPTEETWPGILSNEEFKSYN  242 (301)
T ss_pred             cceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHcCCCChhhchhhhccccccccc
Confidence            567999999998754  4788999999999999999999999764332 22222111   00                  


Q ss_pred             CCC-------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          139 LPG-------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       139 ~p~-------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                      .+.       ......+..+++||.+||. +|.+|||++|+|+||||+...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~  293 (301)
T cd07873         243 YPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG  293 (301)
T ss_pred             cCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence            000       0112346788999999999 999999999999999997543


No 197
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.95  E-value=7.2e-27  Score=226.55  Aligned_cols=172  Identities=27%  Similarity=0.506  Sum_probs=144.5

Q ss_pred             CCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKYT--RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~--~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++....  .+++..+..|+.||+.||.|||+++  ++|+||+|+||+++.+ +.++|+|||++........
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~l~~~nil~~~~-~~~~l~d~~~~~~~~~~~~  156 (256)
T cd08218          80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKD-GTIKLGDFGIARVLNSTVE  156 (256)
T ss_pred             cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCC-CCEEEeeccceeecCcchh
Confidence            578999999997643  5899999999999999999999988  9999999999999876 6899999999976543221


Q ss_pred             -cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHH
Q 010730           79 -AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVG  156 (502)
Q Consensus        79 -~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~  156 (502)
                       .....|++.|+|||++.+ .++.++|+|||||++++|++|..||.. .+...++..+..+..+. .+...+..++++|.
T Consensus       157 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~  234 (256)
T cd08218         157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEA-GNMKNLVLKIIRGSYPP-VSSHYSYDLRNLVS  234 (256)
T ss_pred             hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccC-CCHHHHHHHHhcCCCCC-CcccCCHHHHHHHH
Confidence             234568999999998754 478899999999999999999999976 45566666666666542 33445788999999


Q ss_pred             Hhhh-CcCCCCCHHHHhcCCCC
Q 010730          157 KCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       157 kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      +||. +|.+||++.++|+||||
T Consensus       235 ~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         235 QLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             HHhhCChhhCcCHHHHhhCcCC
Confidence            9998 99999999999999997


No 198
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.95  E-value=7.1e-27  Score=231.58  Aligned_cols=173  Identities=28%  Similarity=0.392  Sum_probs=135.4

Q ss_pred             CCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-C
Q 010730            4 SGTLREYRKKY-----TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-Q   77 (502)
Q Consensus         4 gGsL~~yi~k~-----~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~   77 (502)
                      .|+|.+++...     ..+++..++.++.||+.||.|||.++  |+||||||+||+++.+.+.+||+|||++..+... .
T Consensus        89 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~  166 (295)
T cd07837          89 DSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG--VMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVK  166 (295)
T ss_pred             CcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEecCCCeEEEeecccceecCCCcc
Confidence            36899998643     35899999999999999999999998  9999999999999984479999999998765322 2


Q ss_pred             CcccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC----------------
Q 010730           78 QAHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL----------------  139 (502)
Q Consensus        78 ~~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~----------------  139 (502)
                      ......+++.|+|||++.+  .++.++|||||||++|+|++|..||.+.....++.+.+..-..                
T Consensus       167 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (295)
T cd07837         167 SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWH  246 (295)
T ss_pred             ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchh
Confidence            2233467899999997753  4789999999999999999999999875554444332211000                


Q ss_pred             --CC-------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCc
Q 010730          140 --PG-------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLA  178 (502)
Q Consensus       140 --p~-------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~  178 (502)
                        +.       ......+..+.+||.+||. +|.+||++.|+|.||||+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         247 EFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             hcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence              00       0012246789999999998 999999999999999984


No 199
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=99.95  E-value=7e-27  Score=224.39  Aligned_cols=172  Identities=30%  Similarity=0.569  Sum_probs=145.8

Q ss_pred             CCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC
Q 010730            1 MFTSGTLREYRKKY----TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k~----~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~   76 (502)
                      |+.+++|.+++.+.    +.+++..+..++.||+.||.|||+++  ++|+||+|+||+++.+ +.++|+|||++......
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~~H~dl~~~nil~~~~-~~~~l~d~~~~~~~~~~  156 (258)
T cd08215          80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK--ILHRDIKPQNIFLTSN-GLVKLGDFGISKVLSST  156 (258)
T ss_pred             ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHHeEEcCC-CcEEECCccceeecccC
Confidence            45789999999874    77999999999999999999999998  9999999999999876 78999999999776443


Q ss_pred             C-CcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           77 Q-QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        77 ~-~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      . ......|++.|+|||.+. ..++.++|+||+|+++++|++|..||.. .+..++...+.....+ ..+...+..+.++
T Consensus       157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  234 (258)
T cd08215         157 VDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEG-ENLLELALKILKGQYP-PIPSQYSSELRNL  234 (258)
T ss_pred             cceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCC-CcHHHHHHHHhcCCCC-CCCCCCCHHHHHH
Confidence            3 234467899999999775 4488899999999999999999999966 4466666666655443 3444567899999


Q ss_pred             HHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          155 VGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      |.+||. +|.+||++.++|.||||
T Consensus       235 i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         235 VSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             HHHHcCCChhhCcCHHHHhcCCCC
Confidence            999998 99999999999999997


No 200
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.95  E-value=7.1e-27  Score=224.86  Aligned_cols=169  Identities=23%  Similarity=0.389  Sum_probs=143.6

Q ss_pred             CCCCCcHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730            1 MFTSGTLREYRKKY---------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus         1 ~~tgGsL~~yi~k~---------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      |+.+|+|.+++...         ..+++..++.++.||+.||+|||+++  |+||||||+||+++.+ +.+||+|||.+.
T Consensus        77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~nili~~~-~~~~l~dfg~~~  153 (262)
T cd00192          77 YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK--FVHRDLAARNCLVGED-LVVKISDFGLSR  153 (262)
T ss_pred             eccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC--cccCccCcceEEECCC-CcEEEccccccc
Confidence            46799999999886         78999999999999999999999988  9999999999999987 799999999998


Q ss_pred             eccCCC---CcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCccccc
Q 010730           72 ILRGSQ---QAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRI  146 (502)
Q Consensus        72 ~~~~~~---~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~  146 (502)
                      ......   ......+++.|+|||++.. .++.++|||||||++|+|++ |..||.. ....++++.+..+... ..+..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~  231 (262)
T cd00192         154 DVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPG-LSNEEVLEYLRKGYRL-PKPEY  231 (262)
T ss_pred             ccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCC-CCHHHHHHHHHcCCCC-CCCcc
Confidence            765432   2334567899999998764 68999999999999999999 6999977 4667777777765433 33444


Q ss_pred             ccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          147 QDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       147 ~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .+.++.+++.+||. +|.+||++.|++.+
T Consensus       232 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         232 CPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             CChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            57899999999998 99999999999875


No 201
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.95  E-value=6.8e-27  Score=234.58  Aligned_cols=175  Identities=32%  Similarity=0.582  Sum_probs=142.5

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~   79 (502)
                      |+.+|+|.+++.. ..+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++..+.... ..
T Consensus        99 ~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dl~p~Nill~~~-~~~kL~dfg~~~~~~~~~~~~  174 (297)
T cd06659          99 FLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQG--VIHRDIKSDSILLTLD-GRVKLSDFGFCAQISKDVPKR  174 (297)
T ss_pred             cCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHeEEccC-CcEEEeechhHhhcccccccc
Confidence            5788999998865 56899999999999999999999998  9999999999999876 799999999987553322 23


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCC-cccccccHHHHHHHHH
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPG-AFHRIQDAEARRFVGK  157 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~-~~~~~~s~~l~~LI~k  157 (502)
                      ....|++.|+|||++.+ .++.++|||||||++|+|++|..||.. ....+....+.....+. ......+..+.++|.+
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~  253 (297)
T cd06659         175 KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFS-DSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLER  253 (297)
T ss_pred             cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHhccCCCCccccCCCCHHHHHHHHH
Confidence            44679999999998764 588999999999999999999999976 34444444554433221 1122346789999999


Q ss_pred             hhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          158 CLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       158 cL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      ||. +|.+||++.++++||||...
T Consensus       254 ~l~~~P~~Rps~~~ll~~~~~~~~  277 (297)
T cd06659         254 MLTREPQERATAQELLDHPFLLQT  277 (297)
T ss_pred             HhcCCcccCcCHHHHhhChhhccC
Confidence            998 99999999999999999643


No 202
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.95  E-value=8.9e-27  Score=233.76  Aligned_cols=173  Identities=25%  Similarity=0.354  Sum_probs=137.2

Q ss_pred             CCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CCccc
Q 010730            4 SGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQAHS   81 (502)
Q Consensus         4 gGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~~~s   81 (502)
                      +++|.+++... ..+++..++.++.||+.||.|||+.+  ++||||||+||+++.+ +.+||+|||++...... .....
T Consensus        91 ~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~-~~~kL~dfg~~~~~~~~~~~~~~  167 (309)
T cd07845          91 EQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF--IIHRDLKVSNLLLTDK-GCLKIADFGLARTYGLPAKPMTP  167 (309)
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC-CCEEECccceeeecCCccCCCCc
Confidence            56899988763 67999999999999999999999998  9999999999999876 79999999999876533 22233


Q ss_pred             ccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCC-------------------C-
Q 010730           82 VIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGK-------------------L-  139 (502)
Q Consensus        82 ~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~-------------------~-  139 (502)
                      ..+++.|+|||++.+  .++.++|||||||++|+|++|.+||... +..+.+..+....                   . 
T Consensus       168 ~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (309)
T cd07845         168 KVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK-SEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFT  246 (309)
T ss_pred             ccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHhcCCCChhhchhhhccccccccc
Confidence            456889999998753  4789999999999999999999999764 4444444333210                   0 


Q ss_pred             -CCc-c------cccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          140 -PGA-F------HRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       140 -p~~-~------~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                       +.. +      ....++.+++||.+||. ||.+|||+.++|.||||+..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~  296 (309)
T cd07845         247 LPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEK  296 (309)
T ss_pred             ccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccC
Confidence             000 0      01136788999999999 99999999999999999743


No 203
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.95  E-value=5.9e-27  Score=240.54  Aligned_cols=169  Identities=29%  Similarity=0.433  Sum_probs=135.2

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCccccc
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVI   83 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~v   83 (502)
                      +|+|.+++...  +++..+..++.||+.||+|||+++  |+||||||+||+++.+ +.+||+|||++.............
T Consensus       104 ~~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nil~~~~-~~~kL~Dfg~~~~~~~~~~~~~~~  178 (353)
T cd07850         104 DANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMTPYV  178 (353)
T ss_pred             CCCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCC-CCEEEccCccceeCCCCCCCCCCc
Confidence            57888888654  899999999999999999999998  9999999999999887 799999999998765544445567


Q ss_pred             CCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc--CCC---------------------
Q 010730           84 GTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS--GKL---------------------  139 (502)
Q Consensus        84 GTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~--g~~---------------------  139 (502)
                      |++.|+|||++.+ .++.++|||||||++|+|++|..||....... .+.++..  +..                     
T Consensus       179 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (353)
T cd07850         179 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHID-QWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPK  257 (353)
T ss_pred             ccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCC
Confidence            8999999998754 58999999999999999999999997643322 2222211  000                     


Q ss_pred             ----------CCc-c-------cccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCc
Q 010730          140 ----------PGA-F-------HRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLA  178 (502)
Q Consensus       140 ----------p~~-~-------~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~  178 (502)
                                +.. +       +...+..++++|.+||. ||.+|||+.|+|.||||+
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~  315 (353)
T cd07850         258 YAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYIN  315 (353)
T ss_pred             CCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence                      000 0       11235578999999999 999999999999999986


No 204
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94  E-value=1.1e-26  Score=229.63  Aligned_cols=174  Identities=30%  Similarity=0.568  Sum_probs=141.2

Q ss_pred             CCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHh-CCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC
Q 010730            1 MFTSGTLREYRKKY---TRVDIRAVKNWARQILRGIAYLHG-HDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k~---~~L~e~~i~~i~~QIL~gL~YLHs-~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~   76 (502)
                      |+.+|+|.+++...   ..+++..++.++.||+.||.|||. ++  |+||||||+||+++.+ +.+||+|||++..+...
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~  156 (286)
T cd06622          80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN--IIHRDVKPTNVLVNGN-GQVKLCDFGVSGNLVAS  156 (286)
T ss_pred             ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC--EeeCCCCHHHEEECCC-CCEEEeecCCcccccCC
Confidence            57899999999763   479999999999999999999996 46  9999999999999886 79999999998765332


Q ss_pred             CCcccccCCCcccCcccccc-------CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHH---HhhcCCCCCccccc
Q 010730           77 QQAHSVIGTPEFMAPELYEE-------DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYK---KVTSGKLPGAFHRI  146 (502)
Q Consensus        77 ~~~~s~vGTp~Y~APEvl~~-------~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~---kI~~g~~p~~~~~~  146 (502)
                       ......|++.|+|||++.+       .++.++|||||||++|+|++|..||... .....+.   .+..+..+ ..+..
T Consensus       157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~-~~~~~~~~~~~~~~~~~~-~~~~~  233 (286)
T cd06622         157 -LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPE-TYANIFAQLSAIVDGDPP-TLPSG  233 (286)
T ss_pred             -ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCc-chhhHHHHHHHHhhcCCC-CCCcc
Confidence             2344578999999998743       2578999999999999999999999653 2233332   33444333 33444


Q ss_pred             ccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          147 QDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       147 ~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      .+.++++||.+||. +|.+||++.+++.||||...
T Consensus       234 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~  268 (286)
T cd06622         234 YSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKY  268 (286)
T ss_pred             cCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhc
Confidence            68899999999998 99999999999999999654


No 205
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.94  E-value=1.2e-26  Score=227.93  Aligned_cols=168  Identities=22%  Similarity=0.389  Sum_probs=139.8

Q ss_pred             CCCCCcHHHHHHhCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEe
Q 010730            1 MFTSGTLREYRKKYT--------------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGD   66 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~--------------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~D   66 (502)
                      |+.+|+|.+++...+              .+++..+..++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|
T Consensus        89 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~h~dlkp~nili~~~-~~~kl~d  165 (280)
T cd05049          89 YMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH--FVHRDLATRNCLVGYD-LVVKIGD  165 (280)
T ss_pred             cCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC--eeccccccceEEEcCC-CeEEECC
Confidence            578999999997653              4788999999999999999999998  9999999999999887 7999999


Q ss_pred             cCCceeccCCC---CcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCC
Q 010730           67 LGLAAILRGSQ---QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPG  141 (502)
Q Consensus        67 FGlA~~~~~~~---~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~  141 (502)
                      ||++..+....   ......+++.|+|||++. +.++.++|||||||++|+|++ |..||.. .+...+...+..+..+.
T Consensus       166 ~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~-~~~~~~~~~~~~~~~~~  244 (280)
T cd05049         166 FGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYG-LSNEEVIECITQGRLLQ  244 (280)
T ss_pred             cccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCC-CCHHHHHHHHHcCCcCC
Confidence            99997653221   123345678999999875 458899999999999999999 9999976 45566677777666543


Q ss_pred             cccccccHHHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          142 AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       142 ~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                       .+...+..++++|.+||. +|.+||++.|+++
T Consensus       245 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         245 -RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             -CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence             334567899999999998 9999999999986


No 206
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.94  E-value=1.2e-26  Score=226.09  Aligned_cols=169  Identities=21%  Similarity=0.361  Sum_probs=141.2

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC--
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ--   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~--   78 (502)
                      |+.+|+|.+++.+.+.+++..+..++.||+.||+|||+++  |+||||||.||+++.+ +.+||+|||++..+.....  
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~nill~~~-~~~kl~Dfg~~~~~~~~~~~~  152 (257)
T cd05116          76 LAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETN--FVHRDLAARNVLLVTQ-HYAKISDFGLSKALGADENYY  152 (257)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccchhhEEEcCC-CeEEECCCccccccCCCCCee
Confidence            5678999999998888999999999999999999999998  9999999999999876 7899999999976543321  


Q ss_pred             --cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 --AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 --~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                        .....+++.|+|||++. ..++.++|||||||++|+|++ |..||.. .+...+.+.+..+..+ ..+...+++++++
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~-~~~~~~~~~i~~~~~~-~~~~~~~~~l~~l  230 (257)
T cd05116         153 KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKG-MKGNEVTQMIESGERM-ECPQRCPPEMYDL  230 (257)
T ss_pred             eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHCCCCC-CCCCCCCHHHHHH
Confidence              11223467899999875 458889999999999999998 9999976 4566777777776543 3445568899999


Q ss_pred             HHHhhh-CcCCCCCHHHHhcC
Q 010730          155 VGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~h  174 (502)
                      |.+||. +|.+||++.+|...
T Consensus       231 i~~~~~~~p~~Rp~~~~i~~~  251 (257)
T cd05116         231 MKLCWTYGVDERPGFAVVELR  251 (257)
T ss_pred             HHHHhccCchhCcCHHHHHHH
Confidence            999998 99999999988653


No 207
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.94  E-value=1.2e-26  Score=227.37  Aligned_cols=174  Identities=33%  Similarity=0.577  Sum_probs=141.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC---C
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS---Q   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~---~   77 (502)
                      |+.+|+|.+++.+.+.+++..++.++.||+.||.|||+++  ++||||||+||+++.+ +.++|+|||++......   .
T Consensus        89 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~~~nil~~~~-~~~~l~d~~~~~~~~~~~~~~  165 (272)
T cd06629          89 YVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKG--ILHRDLKADNLLVDAD-GICKISDFGISKKSDDIYDND  165 (272)
T ss_pred             cCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC--eeecCCChhhEEEcCC-CeEEEeecccccccccccccc
Confidence            5689999999999889999999999999999999999988  9999999999999876 79999999998764321   1


Q ss_pred             CcccccCCCcccCcccccc---CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCC---CCCcccccccHHH
Q 010730           78 QAHSVIGTPEFMAPELYEE---DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGK---LPGAFHRIQDAEA  151 (502)
Q Consensus        78 ~~~s~vGTp~Y~APEvl~~---~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~---~p~~~~~~~s~~l  151 (502)
                      ......|+..|+|||++..   .++.++|+||||+++|+|++|..||........+.+......   .+.......+..+
T Consensus       166 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (272)
T cd06629         166 QNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVA  245 (272)
T ss_pred             ccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHH
Confidence            1233568899999998753   378899999999999999999999976554444443332221   2222323457899


Q ss_pred             HHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          152 RRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       152 ~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      +++|.+||. +|.+||+++++|+|||+
T Consensus       246 ~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         246 LDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             HHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            999999998 99999999999999996


No 208
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.94  E-value=6.9e-28  Score=254.96  Aligned_cols=170  Identities=32%  Similarity=0.510  Sum_probs=147.5

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+..|-|.+.++....+.......|.++|+.|+.|||.|.  |||||||.-||||..+ ..|||+|||.++........-
T Consensus       193 fCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hK--IIHRDLKSPNiLIs~~-d~VKIsDFGTS~e~~~~STkM  269 (904)
T KOG4721|consen  193 FCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHK--IIHRDLKSPNILISYD-DVVKISDFGTSKELSDKSTKM  269 (904)
T ss_pred             ccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhh--HhhhccCCCceEeecc-ceEEeccccchHhhhhhhhhh
Confidence            6788999999999999999999999999999999999999  9999999999999987 589999999998876655556


Q ss_pred             cccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhh
Q 010730           81 SVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCL  159 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL  159 (502)
                      +++||..|||||++.. ..++++|||||||+|||||||..||.+-...+.|| -+....+.-..+..++.-++-||+.||
T Consensus       270 SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIw-GVGsNsL~LpvPstcP~GfklL~Kqcw  348 (904)
T KOG4721|consen  270 SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIW-GVGSNSLHLPVPSTCPDGFKLLLKQCW  348 (904)
T ss_pred             hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEE-eccCCcccccCcccCchHHHHHHHHHH
Confidence            7899999999999975 58999999999999999999999997743333333 334444444556667788999999999


Q ss_pred             h-CcCCCCCHHHHhcC
Q 010730          160 E-NVSKRLPAKELLLD  174 (502)
Q Consensus       160 ~-dP~kRpSa~ELL~h  174 (502)
                      . +|..||++.++|.|
T Consensus       349 ~sKpRNRPSFrqil~H  364 (904)
T KOG4721|consen  349 NSKPRNRPSFRQILLH  364 (904)
T ss_pred             hcCCCCCccHHHHHHH
Confidence            8 99999999999999


No 209
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=99.94  E-value=1e-26  Score=229.17  Aligned_cols=171  Identities=29%  Similarity=0.472  Sum_probs=135.6

Q ss_pred             CCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Ccc
Q 010730            4 SGTLREYRKK--YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QAH   80 (502)
Q Consensus         4 gGsL~~yi~k--~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~~   80 (502)
                      .++|.+++..  ...+++..++.++.||+.||+|||.++  ++||||||+||+++.+ +.+||+|||++..+.... ...
T Consensus        82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--i~H~~l~p~nill~~~-~~~~l~dfg~~~~~~~~~~~~~  158 (284)
T cd07860          82 HQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYT  158 (284)
T ss_pred             ccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEEeeccchhhcccCccccc
Confidence            4689999865  356899999999999999999999998  9999999999999987 799999999987654322 223


Q ss_pred             cccCCCcccCccccccC--CCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCC-----------------
Q 010730           81 SVIGTPEFMAPELYEED--YNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPG-----------------  141 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~~--ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~-----------------  141 (502)
                      ...+++.|+|||++.+.  ++.++|||||||++|+|+||..||........+.+.+.....+.                 
T Consensus       159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07860         159 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSF  238 (284)
T ss_pred             cccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhc
Confidence            34678999999987543  67889999999999999999999977554444444332211110                 


Q ss_pred             ---------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          142 ---------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       142 ---------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                               ......+++++++|.+||. ||.+|||++++|.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         239 PKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             ccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence                     0012346788999999998 99999999999999998


No 210
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=99.94  E-value=1.2e-26  Score=230.60  Aligned_cols=168  Identities=22%  Similarity=0.382  Sum_probs=139.7

Q ss_pred             CCCCCcHHHHHHhCC-------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEec
Q 010730            1 MFTSGTLREYRKKYT-------------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDL   67 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~-------------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DF   67 (502)
                      |+.+|+|.+++...+             .+++..+..++.||+.||+|||+++  |+||||||+||+++.+ +.+||+||
T Consensus        88 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~--i~H~dlkp~Nili~~~-~~~kl~df  164 (288)
T cd05093          88 YMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGEN-LLVKIGDF  164 (288)
T ss_pred             cCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEccC-CcEEeccC
Confidence            578999999998654             3899999999999999999999988  9999999999999877 79999999


Q ss_pred             CCceeccCCCC---cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCc
Q 010730           68 GLAAILRGSQQ---AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGA  142 (502)
Q Consensus        68 GlA~~~~~~~~---~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~  142 (502)
                      |++..+.....   .....+++.|+|||++. ..++.++|||||||++|+|++ |..||.. .....+...+..+..+. 
T Consensus       165 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~-~~~~~~~~~i~~~~~~~-  242 (288)
T cd05093         165 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ-LSNNEVIECITQGRVLQ-  242 (288)
T ss_pred             CccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHcCCcCC-
Confidence            99976533211   12344678899999876 458899999999999999998 9999976 45566777777776542 


Q ss_pred             ccccccHHHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          143 FHRIQDAEARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       143 ~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      .....+.++.+|+.+||. +|.+|||+.+++.
T Consensus       243 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         243 RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            334567899999999999 9999999999865


No 211
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.94  E-value=1.1e-26  Score=224.64  Aligned_cols=173  Identities=27%  Similarity=0.482  Sum_probs=142.2

Q ss_pred             CCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKYT--RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~--~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+++|.+++.+..  .+++..++.|+.||+.||.|||+.+  |+|+||||+||+++.+...+||+|||.+........
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~  157 (257)
T cd08225          80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK--ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME  157 (257)
T ss_pred             cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence            577999999997654  4799999999999999999999998  999999999999987744579999999876643322


Q ss_pred             -cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHH
Q 010730           79 -AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVG  156 (502)
Q Consensus        79 -~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~  156 (502)
                       .....|++.|+|||++. ..++.++|+|||||++++|++|..||.. .+..+....+..+..+ ......+..++++|.
T Consensus       158 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~  235 (257)
T cd08225         158 LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEG-NNLHQLVLKICQGYFA-PISPNFSRDLRSLIS  235 (257)
T ss_pred             cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC-ccHHHHHHHHhcccCC-CCCCCCCHHHHHHHH
Confidence             23356899999999875 4588999999999999999999999975 4445555555555443 223345678999999


Q ss_pred             Hhhh-CcCCCCCHHHHhcCCCC
Q 010730          157 KCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       157 kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      +||. +|.+|||+.+++.||||
T Consensus       236 ~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         236 QLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             HHhccChhhCcCHHHHhhCCCC
Confidence            9998 99999999999999997


No 212
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94  E-value=1.2e-26  Score=229.80  Aligned_cols=176  Identities=26%  Similarity=0.484  Sum_probs=142.2

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHG-HDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs-~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++.+.+.+++..++.++.||+.+|.|||+ ++  |+||||||+||+++.+ +.++|+|||++...... ..
T Consensus        84 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~~-~~~~l~d~gl~~~~~~~-~~  159 (284)
T cd06620          84 FMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHR--IMHRDIKPSNILVNSR-GQIKLCDFGVSGELINS-IA  159 (284)
T ss_pred             cCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcC--eeccCCCHHHEEECCC-CcEEEccCCcccchhhh-cc
Confidence            67899999999988899999999999999999999996 56  9999999999999876 79999999998654322 22


Q ss_pred             ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCCh----------HHHHHHhhcCCCCCccccccc
Q 010730           80 HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNP----------AQIYKKVTSGKLPGAFHRIQD  148 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~----------~ql~~kI~~g~~p~~~~~~~s  148 (502)
                      ...+|+..|+|||++. +.++.++|||||||++|+|++|..||......          ..+.+.+.....+.......+
T Consensus       160 ~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd06620         160 DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFP  239 (284)
T ss_pred             CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcC
Confidence            3467999999999774 56888999999999999999999999753321          123344443333222222256


Q ss_pred             HHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          149 AEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       149 ~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      ..+.+||.+||. +|.+|||+.|+++|+||...
T Consensus       240 ~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         240 EDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            789999999998 99999999999999998643


No 213
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=99.94  E-value=1.4e-26  Score=227.83  Aligned_cols=174  Identities=30%  Similarity=0.504  Sum_probs=139.0

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC--C
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ--Q   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~--~   78 (502)
                      |+.++.|..++.+...+++..+..++.||+.||.|||.++  |+||||||+||+++.+ +.+||+|||++.......  .
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~ni~~~~~-~~~kl~d~g~~~~~~~~~~~~  157 (288)
T cd07833          81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN--IIHRDIKPENILVSES-GVLKLCDFGFARALRARPASP  157 (288)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCC-CCEEEEeeecccccCCCcccc
Confidence            4567777777777677999999999999999999999998  9999999999999986 799999999998765433  3


Q ss_pred             cccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc-CC-----------------
Q 010730           79 AHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS-GK-----------------  138 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~-g~-----------------  138 (502)
                      ....++++.|+|||++.+  .++.++||||||+++|+|++|.+||.+......++..... +.                 
T Consensus       158 ~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (288)
T cd07833         158 LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAG  237 (288)
T ss_pred             ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccc
Confidence            345678999999998753  5788999999999999999999999875544444332110 00                 


Q ss_pred             --CCC---------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          139 --LPG---------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       139 --~p~---------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                        ++.         .++...+.++++||.+||. +|.+||+++++++||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         238 VAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             cccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence              000         1122336889999999998 99999999999999997


No 214
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.94  E-value=1.5e-26  Score=230.28  Aligned_cols=169  Identities=22%  Similarity=0.406  Sum_probs=139.8

Q ss_pred             CCCCCcHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEE
Q 010730            1 MFTSGTLREYRKKYT----------------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKI   64 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~----------------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL   64 (502)
                      |+.+|+|.+|+..++                .+++..++.++.||+.||+|||+++  |+||||||+||+++.+ +.+||
T Consensus        88 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~Nil~~~~-~~~~l  164 (291)
T cd05094          88 YMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGAN-LLVKI  164 (291)
T ss_pred             cCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEccC-CcEEE
Confidence            578999999997643                3889999999999999999999998  9999999999999987 79999


Q ss_pred             EecCCceeccCCC---CcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCC
Q 010730           65 GDLGLAAILRGSQ---QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKL  139 (502)
Q Consensus        65 ~DFGlA~~~~~~~---~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~  139 (502)
                      +|||++.......   ......|++.|+|||++. ..++.++|||||||++|+|+| |..||.. .+...+.+.+..+..
T Consensus       165 ~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~-~~~~~~~~~~~~~~~  243 (291)
T cd05094         165 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQ-LSNTEVIECITQGRV  243 (291)
T ss_pred             CCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHhCCCC
Confidence            9999997653321   123345788999999775 458889999999999999999 9999876 455566667766655


Q ss_pred             CCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          140 PGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       140 p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      +. .....+..+.+++.+||. +|.+||++.++++.
T Consensus       244 ~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~  278 (291)
T cd05094         244 LE-RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKI  278 (291)
T ss_pred             CC-CCccCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            43 344557889999999999 99999999999874


No 215
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.94  E-value=1.1e-26  Score=227.19  Aligned_cols=169  Identities=20%  Similarity=0.325  Sum_probs=138.6

Q ss_pred             CCCCCcHHHHHHh------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc
Q 010730            1 MFTSGTLREYRKK------YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR   74 (502)
Q Consensus         1 ~~tgGsL~~yi~k------~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~   74 (502)
                      |+.+|+|.+++..      ...+++..+..++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++.+.
T Consensus        87 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~  163 (272)
T cd05075          87 FMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS--FIHRDLAARNCMLNEN-MNVCVADFGLSKKIY  163 (272)
T ss_pred             eCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhheEEcCC-CCEEECCCCcccccC
Confidence            5788999999843      234899999999999999999999988  9999999999999876 789999999998764


Q ss_pred             CCCC---cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccH
Q 010730           75 GSQQ---AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDA  149 (502)
Q Consensus        75 ~~~~---~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~  149 (502)
                      ....   .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.. ....++++.+..+..+. .....+.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~-~~~~~~~  241 (272)
T cd05075         164 NGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPG-VENSEIYDYLRQGNRLK-QPPDCLD  241 (272)
T ss_pred             cccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHcCCCCC-CCCCCCH
Confidence            3221   122346778999998764 58999999999999999999 8999976 45667777777765432 2334567


Q ss_pred             HHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          150 EARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       150 ~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .++++|.+||. +|.+|||+.+|++.
T Consensus       242 ~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         242 GLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            89999999998 99999999999875


No 216
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94  E-value=2.5e-27  Score=251.63  Aligned_cols=170  Identities=29%  Similarity=0.506  Sum_probs=146.2

Q ss_pred             CCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCccc
Q 010730            3 TSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS   81 (502)
Q Consensus         3 tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s   81 (502)
                      +=|+-.+.+..+ +++.+-+|..++.+.|.||.|||+++  .||||||..|||++.+ |.|||+|||.|....   ...+
T Consensus       108 ClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~--~IHRDiKAGNILLse~-g~VKLaDFGSAsi~~---PAns  181 (948)
T KOG0577|consen  108 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--RIHRDIKAGNILLSEP-GLVKLADFGSASIMA---PANS  181 (948)
T ss_pred             HhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhh--HHhhhccccceEecCC-CeeeeccccchhhcC---chhc
Confidence            346777777654 57999999999999999999999999  9999999999999987 899999999987753   4578


Q ss_pred             ccCCCcccCcccc----ccCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHH
Q 010730           82 VIGTPEFMAPELY----EEDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGK  157 (502)
Q Consensus        82 ~vGTp~Y~APEvl----~~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~k  157 (502)
                      ++|||+||||||+    +|.|+-++||||||+++.||.-.++|+.++.-...+|....+. .|.-...-++..+++||..
T Consensus       182 FvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNe-sPtLqs~eWS~~F~~Fvd~  260 (948)
T KOG0577|consen  182 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-SPTLQSNEWSDYFRNFVDS  260 (948)
T ss_pred             ccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcC-CCCCCCchhHHHHHHHHHH
Confidence            9999999999976    4779999999999999999999999999877777888765543 3323334457889999999


Q ss_pred             hhh-CcCCCCCHHHHhcCCCCcC
Q 010730          158 CLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       158 cL~-dP~kRpSa~ELL~hPff~~  179 (502)
                      ||. -|..|||.+++|.|+|+..
T Consensus       261 CLqKipqeRptse~ll~H~fv~R  283 (948)
T KOG0577|consen  261 CLQKIPQERPTSEELLKHRFVLR  283 (948)
T ss_pred             HHhhCcccCCcHHHHhhcchhcc
Confidence            999 8999999999999999863


No 217
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=99.94  E-value=1.8e-26  Score=221.90  Aligned_cols=172  Identities=34%  Similarity=0.590  Sum_probs=144.1

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC-c
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-A   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~-~   79 (502)
                      |+.+++|.+++.+...+++..+..++.||+.||.|||+.+  |+||||||+||+++.+ +.++|+|||++........ .
T Consensus        80 ~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~~~  156 (254)
T cd06627          80 YAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQG--VIHRDIKAANILTTKD-GVVKLADFGVATKLNDVSKDD  156 (254)
T ss_pred             cCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEECCC-CCEEEeccccceecCCCcccc
Confidence            4678999999998889999999999999999999999998  9999999999999876 7999999999987654332 2


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ....+++.|+|||.+.+ .++.++||||||+++|+|++|..||.........++.. ....+ .++...+..++++|.+|
T Consensus       157 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~i~~~  234 (254)
T cd06627         157 ASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV-QDDHP-PLPEGISPELKDFLMQC  234 (254)
T ss_pred             cccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh-ccCCC-CCCCCCCHHHHHHHHHH
Confidence            34578999999998754 47889999999999999999999997654434444433 33332 34455678999999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCC
Q 010730          159 LE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff  177 (502)
                      |. +|.+||++.+++.||||
T Consensus       235 l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         235 FQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             HhCChhhCcCHHHHhcCCCC
Confidence            98 99999999999999997


No 218
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=99.94  E-value=2.4e-26  Score=221.28  Aligned_cols=171  Identities=33%  Similarity=0.566  Sum_probs=146.4

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~~   79 (502)
                      |+.+++|.+++.+.+.+++..+..++.||+.||.|||..+  ++|+||||+||+++.+ +.++|+|||++...... ...
T Consensus        74 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~--~~H~~l~p~ni~~~~~-~~~~l~d~~~~~~~~~~~~~~  150 (250)
T cd05123          74 YAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLG--IIYRDLKPENILLDAD-GHIKLTDFGLAKELSSEGSRT  150 (250)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcceEEEcCC-CcEEEeecCcceecccCCCcc
Confidence            4568999999998888999999999999999999999988  9999999999999886 79999999999776443 233


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ....++..|++||.+.+ ..+.++|+||||+++|+|++|..||.. ....++++.+....+  .++...+..+.++|.+|
T Consensus       151 ~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~-~~~~~~~~~~~~~~~--~~~~~~~~~l~~~i~~~  227 (250)
T cd05123         151 NTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYA-EDRKEIYEKILKDPL--RFPEFLSPEARDLISGL  227 (250)
T ss_pred             cCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHhcCCC--CCCCCCCHHHHHHHHHH
Confidence            45678999999998754 477899999999999999999999965 444667777766544  34455578999999999


Q ss_pred             hh-CcCCCCCH---HHHhcCCCC
Q 010730          159 LE-NVSKRLPA---KELLLDPFL  177 (502)
Q Consensus       159 L~-dP~kRpSa---~ELL~hPff  177 (502)
                      |. +|.+||++   ++++.||||
T Consensus       228 l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         228 LQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             hcCCHhhCCCcccHHHHHhCCCC
Confidence            98 99999999   999999998


No 219
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.94  E-value=1.6e-26  Score=229.48  Aligned_cols=170  Identities=27%  Similarity=0.408  Sum_probs=135.4

Q ss_pred             CCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CCccc
Q 010730            4 SGTLREYRKKYT-RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQAHS   81 (502)
Q Consensus         4 gGsL~~yi~k~~-~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~~~s   81 (502)
                      +++|.+++.... .+++..++.++.||+.||+|||+++  |+|+||||+||+++.+ +.+||+|||++..+... .....
T Consensus        89 ~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~~-~~~~l~d~g~~~~~~~~~~~~~~  165 (293)
T cd07843          89 EHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW--ILHRDLKTSNLLLNNR-GILKICDFGLAREYGSPLKPYTQ  165 (293)
T ss_pred             CcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECCC-CcEEEeecCceeeccCCcccccc
Confidence            469999987654 5999999999999999999999998  9999999999999887 79999999999876543 22344


Q ss_pred             ccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcC----------------------
Q 010730           82 VIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSG----------------------  137 (502)
Q Consensus        82 ~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g----------------------  137 (502)
                      ..+++.|+|||++.+  .++.++|||||||++|+|++|..||........ +.++...                      
T Consensus       166 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (293)
T cd07843         166 LVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQ-LNKIFKLLGTPTEKIWPGFSELPGAKKKT  244 (293)
T ss_pred             ccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCchHHHHHhhccchhcccc
Confidence            568999999998754  368899999999999999999999976443322 2222110                      


Q ss_pred             -------CCCCccccc-ccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          138 -------KLPGAFHRI-QDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       138 -------~~p~~~~~~-~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                             .+...++.. .+..++++|.+||. +|.+|||++|+|.||||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         245 FTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             cccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence                   000112222 46789999999999 99999999999999997


No 220
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.94  E-value=2.8e-26  Score=227.24  Aligned_cols=169  Identities=25%  Similarity=0.426  Sum_probs=138.8

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC-
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~-   78 (502)
                      |+.+|+|.+++... +.+++..+..|+.||+.||.|||+.+  ++||||||+||+++.+ +.+||+|||+++.+..... 
T Consensus        89 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~nili~~~-~~~kl~Dfg~~~~~~~~~~~  165 (279)
T cd05111          89 LSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR--MVHRNLAARNILLKSD-SIVQIADFGVADLLYPDDKK  165 (279)
T ss_pred             eCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcCC-CcEEEcCCccceeccCCCcc
Confidence            56799999999764 57999999999999999999999988  9999999999999876 7899999999987543221 


Q ss_pred             --cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 --AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 --~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                        .....++..|+|||++. +.++.++|||||||++|||++ |..||.+ .....+.+.+..+..+ ..+...+..+.++
T Consensus       166 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  243 (279)
T cd05111         166 YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAG-MRPHEVPDLLEKGERL-AQPQICTIDVYMV  243 (279)
T ss_pred             cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHCCCcC-CCCCCCCHHHHHH
Confidence              22345678899999875 568999999999999999998 9999976 3445555555555443 2334456788999


Q ss_pred             HHHhhh-CcCCCCCHHHHhcC
Q 010730          155 VGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~h  174 (502)
                      +.+||. +|.+|||+.|+++.
T Consensus       244 i~~c~~~~p~~Rps~~el~~~  264 (279)
T cd05111         244 MVKCWMIDENVRPTFKELANE  264 (279)
T ss_pred             HHHHcCCCcccCcCHHHHHHH
Confidence            999998 99999999999874


No 221
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.94  E-value=1.8e-26  Score=227.38  Aligned_cols=171  Identities=29%  Similarity=0.449  Sum_probs=135.6

Q ss_pred             CCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Ccc
Q 010730            4 SGTLREYRKKYT--RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QAH   80 (502)
Q Consensus         4 gGsL~~yi~k~~--~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~~   80 (502)
                      +++|.+++....  .+++..+..++.||+.||+|||+++  ++||||+|+||+++.+ +.++|+|||++....... ...
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~--~~H~dl~p~nil~~~~-~~~~l~df~~~~~~~~~~~~~~  157 (283)
T cd07835          81 DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR--VLHRDLKPQNLLIDRE-GALKLADFGLARAFGVPVRTYT  157 (283)
T ss_pred             CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcCC-CcEEEeecccccccCCCccccC
Confidence            578999998766  7999999999999999999999988  9999999999999886 799999999987653222 123


Q ss_pred             cccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC-------------------
Q 010730           81 SVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL-------------------  139 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~-------------------  139 (502)
                      ...+++.|+|||++.+  .++.++||||||+++|+|++|.+||.......++++.+.....                   
T Consensus       158 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T cd07835         158 HEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTF  237 (283)
T ss_pred             ccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhc
Confidence            3467899999998754  3688999999999999999999999764443333332211000                   


Q ss_pred             C-------CcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          140 P-------GAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       140 p-------~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      +       .......+..+.++|.+||. +|.+|||++|++.||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         238 PKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             ccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            0       00112345789999999998 99999999999999997


No 222
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.94  E-value=3.8e-26  Score=224.70  Aligned_cols=171  Identities=29%  Similarity=0.435  Sum_probs=138.6

Q ss_pred             CCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCccc
Q 010730            4 SGTLREYRKKYT--RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS   81 (502)
Q Consensus         4 gGsL~~yi~k~~--~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s   81 (502)
                      +|+|.+++....  .+++..+..++.||+.+|.|||+++  ++|+||||+||+++.+ +.++|+|||++...........
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~dl~~~ni~i~~~-~~~~l~d~~~~~~~~~~~~~~~  157 (283)
T cd07830          81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG--FFHRDLKPENLLVSGP-EVVKIADFGLAREIRSRPPYTD  157 (283)
T ss_pred             CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcCC-CCEEEeecccceeccCCCCcCC
Confidence            889999998764  7899999999999999999999998  9999999999999986 7999999999987655444455


Q ss_pred             ccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC--------------------
Q 010730           82 VIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL--------------------  139 (502)
Q Consensus        82 ~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~--------------------  139 (502)
                      ..|+..|+|||++..  .++.++|+||||+++++|++|.+||.......++++.......                    
T Consensus       158 ~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T cd07830         158 YVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRF  237 (283)
T ss_pred             CCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccc
Confidence            678999999998743  4788999999999999999999999775544444332211000                    


Q ss_pred             CC-------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          140 PG-------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       140 p~-------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      +.       ......+..+.++|.+||. +|.+|||++|++.||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         238 PQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             cccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            00       0001125789999999998 99999999999999997


No 223
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2,  and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.94  E-value=3.2e-26  Score=220.85  Aligned_cols=171  Identities=30%  Similarity=0.503  Sum_probs=144.8

Q ss_pred             CCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC
Q 010730            1 MFTSGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k----~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~   76 (502)
                      |+.+++|.+++.+    ...+++..+..++.||+.||.|||+.+  ++|+||||+||+++.+ +.+||+|||++......
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~--i~h~~l~~~ni~~~~~-~~~kl~d~g~~~~~~~~  156 (256)
T cd08530          80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK--ILHRDLKSANILLVAN-DLVKIGDLGISKVLKKN  156 (256)
T ss_pred             hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEEecC-CcEEEeeccchhhhccC
Confidence            4678999999876    356899999999999999999999998  9999999999999986 78999999999776544


Q ss_pred             CCcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHH
Q 010730           77 QQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFV  155 (502)
Q Consensus        77 ~~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI  155 (502)
                       ......|++.|+|||.+.+ .++.++|+||||+++|+|++|..||.. .+...+...+..+..+. .....+.+++++|
T Consensus       157 -~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li  233 (256)
T cd08530         157 -MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEA-RSMQDLRYKVQRGKYPP-IPPIYSQDLQNFI  233 (256)
T ss_pred             -CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHhcCCCCC-CchhhCHHHHHHH
Confidence             3344678999999998754 478899999999999999999999976 45556666666665543 3335678899999


Q ss_pred             HHhhh-CcCCCCCHHHHhcCCCC
Q 010730          156 GKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      .+||. +|.+||++.++|+||++
T Consensus       234 ~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         234 RSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             HHHcCCCcccCCCHHHHhcCCCC
Confidence            99998 99999999999999985


No 224
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.94  E-value=1.7e-26  Score=228.63  Aligned_cols=177  Identities=36%  Similarity=0.621  Sum_probs=143.6

Q ss_pred             CCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-C
Q 010730            1 MFTSGTLREYRKKYT-RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-Q   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~-~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~   78 (502)
                      |+.+++|.+++...+ .++...+..++.||+.||.|||+.+  |+|+||||+||+++.+ +.++|+|||++....... .
T Consensus        96 ~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~g--i~H~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~~  172 (286)
T cd06614          96 YMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN--VIHRDIKSDNILLSKD-GSVKLADFGFAAQLTKEKSK  172 (286)
T ss_pred             ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCChhhEEEcCC-CCEEECccchhhhhccchhh
Confidence            567899999999876 8999999999999999999999988  9999999999999876 799999999986543221 2


Q ss_pred             cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCC-cccccccHHHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPG-AFHRIQDAEARRFVG  156 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~-~~~~~~s~~l~~LI~  156 (502)
                      .....+++.|+|||++.+ .++.++|+|||||++|+|++|..||... +.......+.....+. ......+..++++|.
T Consensus       173 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  251 (286)
T cd06614         173 RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLRE-PPLRALFLITTKGIPPLKNPEKWSPEFKDFLN  251 (286)
T ss_pred             hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhcCCCCCcchhhCCHHHHHHHH
Confidence            234568899999998754 4889999999999999999999999763 4333333443333322 222225678999999


Q ss_pred             Hhhh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          157 KCLE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       157 kcL~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                      +||. +|.+||++.++|.||||....
T Consensus       252 ~~l~~~p~~Rpt~~~il~~~~~~~~~  277 (286)
T cd06614         252 KCLVKDPEKRPSAEELLQHPFLKKAC  277 (286)
T ss_pred             HHhccChhhCcCHHHHhhChHhhccC
Confidence            9999 999999999999999998643


No 225
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.94  E-value=2e-26  Score=225.10  Aligned_cols=171  Identities=31%  Similarity=0.542  Sum_probs=143.3

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC---
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ---   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~---   77 (502)
                      |+.+|+|.+++.+.+.+++..++.++.||+.||.|||+++  ++|+||||+||+++.+ +.++|+|||++.......   
T Consensus        83 ~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~--~~H~dl~~~ni~i~~~-~~~~l~df~~~~~~~~~~~~~  159 (280)
T cd05581          83 YAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKG--IIHRDLKPENILLDKD-MHIKITDFGTAKVLDPNSSPE  159 (280)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCC-CCEEecCCccccccCCccccc
Confidence            4679999999999889999999999999999999999998  9999999999999876 799999999987654322   


Q ss_pred             ------------------CcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCC
Q 010730           78 ------------------QAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGK  138 (502)
Q Consensus        78 ------------------~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~  138 (502)
                                        ......|++.|+|||++.. .++.++||||||+++++|++|..||... ...+.++.+....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~~~~  238 (280)
T cd05581         160 SNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGS-NEYLTFQKILKLE  238 (280)
T ss_pred             cCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCc-cHHHHHHHHHhcC
Confidence                              1233568899999997754 4788999999999999999999999764 3445555555433


Q ss_pred             CCCcccccccHHHHHHHHHhhh-CcCCCCCH----HHHhcCCCC
Q 010730          139 LPGAFHRIQDAEARRFVGKCLE-NVSKRLPA----KELLLDPFL  177 (502)
Q Consensus       139 ~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa----~ELL~hPff  177 (502)
                      .  .++...++.+.+||.+||. +|.+||++    .++|.||||
T Consensus       239 ~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         239 Y--SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             C--CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            3  2333447889999999998 99999999    999999997


No 226
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.94  E-value=1.8e-26  Score=230.56  Aligned_cols=169  Identities=24%  Similarity=0.356  Sum_probs=136.5

Q ss_pred             CCCCCcHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEE
Q 010730            1 MFTSGTLREYRKKYT----------------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKI   64 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~----------------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL   64 (502)
                      |+.+|+|.+++.+.+                .+++..++.++.||+.||+|||+++  |+||||||+||+++.+ +.+||
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~-~~~kl  160 (297)
T cd05089          84 YAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ--FIHRDLAARNVLVGEN-LASKI  160 (297)
T ss_pred             ecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCcCCcceEEECCC-CeEEE
Confidence            467899999997643                4888999999999999999999988  9999999999999876 78999


Q ss_pred             EecCCceeccCCCCcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCc
Q 010730           65 GDLGLAAILRGSQQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGA  142 (502)
Q Consensus        65 ~DFGlA~~~~~~~~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~  142 (502)
                      +|||++..............+..|+|||++.. .++.++|||||||++|+|++ |..||.. ....+++.++..+..+ .
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~-~~~~~~~~~~~~~~~~-~  238 (297)
T cd05089         161 ADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCG-MTCAELYEKLPQGYRM-E  238 (297)
T ss_pred             CCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHhcCCCC-C
Confidence            99999864322111112223557999998754 58999999999999999997 9999976 5566677777665432 2


Q ss_pred             ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          143 FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       143 ~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .+...+..+++||.+||. +|.+||++.++++.
T Consensus       239 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         239 KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            344567899999999998 99999999999865


No 227
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.94  E-value=2.3e-26  Score=226.89  Aligned_cols=169  Identities=25%  Similarity=0.429  Sum_probs=137.7

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++... +.+++..+..++.||+.||+|||+.+  |+||||||+|||++.+ +.+||+|||+++........
T Consensus        89 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--iiH~dlkp~Nil~~~~-~~~kL~dfG~~~~~~~~~~~  165 (279)
T cd05109          89 LMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR--LVHRDLAARNVLVKSP-NHVKITDFGLARLLDIDETE  165 (279)
T ss_pred             cCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccccceEEEcCC-CcEEECCCCceeecccccce
Confidence            56899999999764 56999999999999999999999998  9999999999999876 68999999999876432221


Q ss_pred             ---ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           80 ---HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        80 ---~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                         ....+++.|+|||++. ..++.++|||||||++|||++ |..||.. .....+...+..+..+ ..+...+..+.++
T Consensus       166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  243 (279)
T cd05109         166 YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDG-IPAREIPDLLEKGERL-PQPPICTIDVYMI  243 (279)
T ss_pred             eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHCCCcC-CCCccCCHHHHHH
Confidence               1223467899999875 458999999999999999998 9999865 4445566666555433 2334467889999


Q ss_pred             HHHhhh-CcCCCCCHHHHhcC
Q 010730          155 VGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~h  174 (502)
                      |.+||. +|.+||++.+++..
T Consensus       244 i~~~l~~dp~~Rp~~~~l~~~  264 (279)
T cd05109         244 MVKCWMIDSECRPRFRELVDE  264 (279)
T ss_pred             HHHHcCCChhhCcCHHHHHHH
Confidence            999998 99999999999954


No 228
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.94  E-value=1.6e-26  Score=240.83  Aligned_cols=155  Identities=21%  Similarity=0.358  Sum_probs=125.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC---cccccCCCcccCcc
Q 010730           16 RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ---AHSVIGTPEFMAPE   92 (502)
Q Consensus        16 ~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~---~~s~vGTp~Y~APE   92 (502)
                      ++++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||+++.+.....   .....+++.|+|||
T Consensus       208 ~l~~~~~~~i~~qi~~aL~yLH~~g--iiHrDLkp~Nil~~~~-~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE  284 (374)
T cd05106         208 PLDLDDLLRFSSQVAQGMDFLASKN--CIHRDVAARNVLLTDG-RVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPE  284 (374)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHCC--EEeccCchheEEEeCC-CeEEEeeceeeeeccCCcceeeccCCCCccceeCHH
Confidence            4788899999999999999999998  9999999999999876 7899999999976543221   12234567899999


Q ss_pred             ccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhhh-CcCCCCCHH
Q 010730           93 LYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAK  169 (502)
Q Consensus        93 vl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~  169 (502)
                      ++. ..++.++|||||||++|+|++ |..||........+++.+..+. ....+...+++++++|.+||. +|.+||++.
T Consensus       285 ~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~  363 (374)
T cd05106         285 SIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGY-QMSRPDFAPPEIYSIMKMCWNLEPTERPTFS  363 (374)
T ss_pred             HhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHccc-CccCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            775 569999999999999999997 9999987554445555554443 223344457899999999999 999999999


Q ss_pred             HHhcC
Q 010730          170 ELLLD  174 (502)
Q Consensus       170 ELL~h  174 (502)
                      ++++.
T Consensus       364 ~l~~~  368 (374)
T cd05106         364 QISQL  368 (374)
T ss_pred             HHHHH
Confidence            99863


No 229
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.94  E-value=1.3e-26  Score=235.67  Aligned_cols=173  Identities=25%  Similarity=0.403  Sum_probs=137.6

Q ss_pred             CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-----
Q 010730            3 TSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-----   77 (502)
Q Consensus         3 tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-----   77 (502)
                      .+++|.+++.....+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||++..+....     
T Consensus        88 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g--ivH~dlkp~Nili~~~-~~~kl~Dfg~a~~~~~~~~~~~~  164 (332)
T cd07857          88 MEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSAN--VLHRDLKPGNLLVNAD-CELKICDFGLARGFSENPGENAG  164 (332)
T ss_pred             ccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHeEEcCC-CCEEeCcCCCceecccccccccc
Confidence            46899999988889999999999999999999999998  9999999999999887 799999999998654321     


Q ss_pred             CcccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhh---------------cC---
Q 010730           78 QAHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVT---------------SG---  137 (502)
Q Consensus        78 ~~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~---------------~g---  137 (502)
                      .....+||+.|+|||++.+  .++.++|||||||++|+|++|.+||...... ..+..+.               ..   
T Consensus       165 ~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (332)
T cd07857         165 FMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQVLGTPDEETLSRIGSPKAQ  243 (332)
T ss_pred             cccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHHHhCCCCHHHHHhhhhhhHH
Confidence            1234579999999997754  4889999999999999999999999763321 1111111               00   


Q ss_pred             -------CCC----CcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          138 -------KLP----GAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       138 -------~~p----~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                             ..+    .......+..+++||.+||. +|.+|||+.+++.||||+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~  297 (332)
T cd07857         244 NYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAI  297 (332)
T ss_pred             HHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhh
Confidence                   000    01122246789999999998 9999999999999999963


No 230
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.94  E-value=1.8e-27  Score=254.57  Aligned_cols=177  Identities=26%  Similarity=0.467  Sum_probs=159.7

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |..+|.|++|+.+++++.+..++.++.|++++++|||+++  |+|||||++|||++.+ -.+||+|||++..+.......
T Consensus       136 ya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~--ivHrdLk~eNilL~~~-mnikIaDfgfS~~~~~~~~lq  212 (596)
T KOG0586|consen  136 YASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKN--IVHRDLKAENILLDEN-MNIKIADFGFSTFFDYGLMLQ  212 (596)
T ss_pred             eccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcc--eeccccchhhcccccc-cceeeeccccceeeccccccc
Confidence            5789999999999999999999999999999999999999  9999999999999988 479999999999998888889


Q ss_pred             cccCCCcccCccccccC--CCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           81 SVIGTPEFMAPELYEED--YNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~~--ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      +.+|+|.|.|||++.+.  .++++|+||+|+++|.|++|.+||.+ .+...+-..+..+++.  ++...+.+++++|.++
T Consensus       213 t~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG-~~lk~Lr~rvl~gk~r--Ip~~ms~dce~lLrk~  289 (596)
T KOG0586|consen  213 TFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDG-QNLKELRPRVLRGKYR--IPFYMSCDCEDLLRKF  289 (596)
T ss_pred             ccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCC-cccccccchheeeeec--ccceeechhHHHHHHh
Confidence            99999999999999764  57899999999999999999999976 6777777788888773  4445678999999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcCCCCC
Q 010730          159 LE-NVSKRLPAKELLLDPFLASDAGE  183 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~~~~~  183 (502)
                      |. +|.+|++.++++.|.|.......
T Consensus       290 lvl~Pskr~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  290 LVLNPSKRGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             hccCccccCCHHHhhhhcccchhhhh
Confidence            98 99999999999999999755433


No 231
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.94  E-value=1.9e-26  Score=232.71  Aligned_cols=169  Identities=25%  Similarity=0.450  Sum_probs=138.0

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++.+. ..++...+..++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++.+......
T Consensus        89 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--iiH~dlkp~Nill~~~-~~~kl~DfG~a~~~~~~~~~  165 (316)
T cd05108          89 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLGADEKE  165 (316)
T ss_pred             cCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEecCC-CcEEEccccccccccCCCcc
Confidence            57899999999875 46899999999999999999999998  9999999999999876 68999999999876533222


Q ss_pred             ---ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           80 ---HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        80 ---~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                         ....++..|+|||++. ..++.++|||||||++|+|++ |..||.+ ....++...+..+..+ ..+...+..+.++
T Consensus       166 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  243 (316)
T cd05108         166 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IPASEISSILEKGERL-PQPPICTIDVYMI  243 (316)
T ss_pred             eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHhCCCCC-CCCCCCCHHHHHH
Confidence               1223467899999775 458999999999999999998 9999976 4455555555544332 2334567889999


Q ss_pred             HHHhhh-CcCCCCCHHHHhcC
Q 010730          155 VGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~h  174 (502)
                      +.+||. +|.+||++.+++.+
T Consensus       244 i~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         244 MVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HHHHccCChhhCcCHHHHHHH
Confidence            999998 99999999999986


No 232
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.94  E-value=1.9e-26  Score=233.14  Aligned_cols=175  Identities=30%  Similarity=0.382  Sum_probs=141.4

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC----Cc
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ----QA   79 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~----~~   79 (502)
                      +++|.+++.+...+++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.++|+|||++.......    ..
T Consensus        87 ~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~g--i~H~dlkp~nili~~~-~~~~L~dfg~~~~~~~~~~~~~~~  163 (330)
T cd07834          87 ETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSAN--VIHRDLKPSNILVNSN-CDLKICDFGLARGVDPDEDEKGFL  163 (330)
T ss_pred             hhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCC-CCEEEcccCceEeecccccccccc
Confidence            4689999988889999999999999999999999998  9999999999999987 899999999998765432    23


Q ss_pred             ccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCC--CCC--------------
Q 010730           80 HSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGK--LPG--------------  141 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~--~p~--------------  141 (502)
                      ....+++.|+|||++.+  .++.++|+||||+++|+|++|.+||... +..+.++.+....  .+.              
T Consensus       164 ~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  242 (330)
T cd07834         164 TEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGR-DYIDQLNLIVEVLGTPSEEDLKFITSEKARNY  242 (330)
T ss_pred             cccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCC-CHHHHHHHHHHhcCCCChhHhhhccccchhhH
Confidence            45678999999998754  4888999999999999999999999764 3344344333210  000              


Q ss_pred             ----------c---ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCCC
Q 010730          142 ----------A---FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAG  182 (502)
Q Consensus       142 ----------~---~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~~  182 (502)
                                .   .....+..+.++|.+||. +|.+||++.++|.||||+....
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         243 LKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD  297 (330)
T ss_pred             HhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence                      0   011236788999999998 9999999999999999975443


No 233
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.94  E-value=2.4e-26  Score=228.61  Aligned_cols=171  Identities=23%  Similarity=0.383  Sum_probs=132.4

Q ss_pred             CCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC---
Q 010730            3 TSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ---   78 (502)
Q Consensus         3 tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~---   78 (502)
                      .+++|.+++.+. ..+++..++.++.||+.||.|||+++  |+|+||||+||+++.+ +.+||+|||++..+.....   
T Consensus       101 ~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~~~~~~~~  177 (310)
T cd07865         101 CEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK--ILHRDMKAANILITKD-GILKLADFGLARAFSLSKNSKP  177 (310)
T ss_pred             CCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEECCC-CcEEECcCCCcccccCCcccCC
Confidence            356888888764 36999999999999999999999998  9999999999999877 7999999999976533211   


Q ss_pred             --cccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc--CCCCCc----------
Q 010730           79 --AHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS--GKLPGA----------  142 (502)
Q Consensus        79 --~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~--g~~p~~----------  142 (502)
                        .....+++.|+|||++.+  .++.++||||||+++|+|++|..||... +.......+..  +..+..          
T Consensus       178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (310)
T cd07865         178 NRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGN-TEQHQLTLISQLCGSITPEVWPGVDKLEL  256 (310)
T ss_pred             CCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHhCCCChhhcccccchhh
Confidence              123567899999998754  3788999999999999999999999763 32222111111  111100          


Q ss_pred             ------------------ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          143 ------------------FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       143 ------------------~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                                        .....+..+++||.+||. +|.+|||++|+|+||||
T Consensus       257 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         257 FKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             hhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence                              011235678899999999 99999999999999997


No 234
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.94  E-value=1.6e-26  Score=231.18  Aligned_cols=177  Identities=34%  Similarity=0.564  Sum_probs=142.0

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~   79 (502)
                      |+.+|+|.+++.+. .+++..+..++.||+.||.|||+++  ++||||||+||+++.+ +.+||+|||++....... ..
T Consensus        97 ~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~g--i~H~dL~p~Nili~~~-~~~kL~dfg~~~~~~~~~~~~  172 (293)
T cd06647          97 YLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMD-GSVKLTDFGFCAQITPEQSKR  172 (293)
T ss_pred             cCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCC--EeeccCCHHHEEEcCC-CCEEEccCcceeccccccccc
Confidence            57899999999764 5889999999999999999999998  9999999999999876 789999999987654322 22


Q ss_pred             ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ....|++.|+|||.+. ..++.++|+|||||++|+|++|..||.......++......+......+...+..++++|.+|
T Consensus       173 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  252 (293)
T cd06647         173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC  252 (293)
T ss_pred             ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHH
Confidence            3457899999999775 458889999999999999999999997644333333222222222222333567899999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          159 LE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                      |. +|.+||++.+++.||||+...
T Consensus       253 l~~~p~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         253 LEMDVEKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             ccCChhhCcCHHHHhcCHHHhcCc
Confidence            98 999999999999999997544


No 235
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.94  E-value=3e-26  Score=227.24  Aligned_cols=177  Identities=25%  Similarity=0.429  Sum_probs=144.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC--CC
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS--QQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~--~~   78 (502)
                      |+.+|+|.+++...+.+++..+..++.||+.||.|||+.+  ++||||||+|||++.+ +.+||+|||++......  ..
T Consensus        86 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~~~~~~~  162 (290)
T cd05613          86 YINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLG--IIYRDIKLENILLDSN-GHVVLTDFGLSKEFHEDEVER  162 (290)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEECCC-CCEEEeeCccceecccccccc
Confidence            5789999999998888999999999999999999999988  9999999999999876 79999999999765432  22


Q ss_pred             cccccCCCcccCcccccc---CCCCcccchhHHHHHHHHhhccCCCCCCC---ChHHHHHHhhcCCCCCcccccccHHHH
Q 010730           79 AHSVIGTPEFMAPELYEE---DYNELVDIYSFGMCVLEMLTSEYPYSECS---NPAQIYKKVTSGKLPGAFHRIQDAEAR  152 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~---~ys~~~DIWSLGviLyeLLTG~~Pf~~~~---~~~ql~~kI~~g~~p~~~~~~~s~~l~  152 (502)
                      .....|++.|+|||.+..   .++.++||||||+++|+|++|..||....   ....+.+.+.....  .++...++.++
T Consensus       163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  240 (290)
T cd05613         163 AYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP--PYPQEMSALAK  240 (290)
T ss_pred             cccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCC--CCCccCCHHHH
Confidence            235679999999998753   46789999999999999999999996421   22334444433332  23445678899


Q ss_pred             HHHHHhhh-CcCCCC-----CHHHHhcCCCCcCCCC
Q 010730          153 RFVGKCLE-NVSKRL-----PAKELLLDPFLASDAG  182 (502)
Q Consensus       153 ~LI~kcL~-dP~kRp-----Sa~ELL~hPff~~~~~  182 (502)
                      +++.+||. +|.+|+     ++.+++.||||+...+
T Consensus       241 ~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~  276 (290)
T cd05613         241 DIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINW  276 (290)
T ss_pred             HHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCH
Confidence            99999998 999997     8999999999976543


No 236
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.94  E-value=2.6e-26  Score=229.06  Aligned_cols=174  Identities=28%  Similarity=0.507  Sum_probs=139.8

Q ss_pred             CCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCccc
Q 010730            4 SGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHG-HDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS   81 (502)
Q Consensus         4 gGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs-~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s   81 (502)
                      +++|.+++.. .+.+++..+..++.||+.||+|||+ ++  |+||||||+||+++.+ +.+||+|||++..+........
T Consensus        97 ~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~--i~H~dl~p~nill~~~-~~~kL~dfg~~~~~~~~~~~~~  173 (296)
T cd06618          97 STCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHG--VIHRDVKPSNILLDAS-GNVKLCDFGISGRLVDSKAKTR  173 (296)
T ss_pred             CcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCC--EecCCCcHHHEEEcCC-CCEEECccccchhccCCCcccC
Confidence            5677777765 4579999999999999999999997 46  9999999999999876 7999999999876644333334


Q ss_pred             ccCCCcccCccccccC-----CCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCc-ccccccHHHHHHH
Q 010730           82 VIGTPEFMAPELYEED-----YNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGA-FHRIQDAEARRFV  155 (502)
Q Consensus        82 ~vGTp~Y~APEvl~~~-----ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~-~~~~~s~~l~~LI  155 (502)
                      ..+++.|+|||++.+.     ++.++||||||+++|+|++|..||.......+.+..+.....+.. .....+.++.+||
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  253 (296)
T cd06618         174 SAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFV  253 (296)
T ss_pred             CCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Confidence            5688999999988533     788999999999999999999999765444455555554443321 1123577899999


Q ss_pred             HHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          156 GKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      .+||. +|.+||++.+++.||||...
T Consensus       254 ~~~l~~~p~~Rp~~~~il~~~~~~~~  279 (296)
T cd06618         254 DLCLTKDHRKRPKYRELLQHPFIRRY  279 (296)
T ss_pred             HHHccCChhhCCCHHHHhcChhhhcc
Confidence            99998 99999999999999999743


No 237
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.94  E-value=3.3e-26  Score=222.64  Aligned_cols=166  Identities=19%  Similarity=0.343  Sum_probs=138.5

Q ss_pred             CCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKYT--RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~--~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++++.+  .+++..+..++.||+.||+|||+++  |+||||||+||+++.+ +.+||+|||++....... 
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~~-~~~kl~dfg~~~~~~~~~-  156 (256)
T cd05082          81 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN--FVHRDLAARNVLVSED-NVAKVSDFGLTKEASSTQ-  156 (256)
T ss_pred             CCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeccccchheEEEcCC-CcEEecCCccceeccccC-
Confidence            567899999998654  4889999999999999999999998  9999999999999877 799999999987654322 


Q ss_pred             cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVG  156 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~  156 (502)
                       ....++..|+|||++.+ .++.++|||||||++|+|++ |..||.. .+..++...+..+..+ ......++.++++|.
T Consensus       157 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~  233 (256)
T cd05082         157 -DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR-IPLKDVVPRVEKGYKM-DAPDGCPPVVYDVMK  233 (256)
T ss_pred             -CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHhcCCCC-CCCCCCCHHHHHHHH
Confidence             23345678999998764 48889999999999999998 9999975 5666777777665433 344556789999999


Q ss_pred             Hhhh-CcCCCCCHHHHhc
Q 010730          157 KCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       157 kcL~-dP~kRpSa~ELL~  173 (502)
                      +||. +|.+|||+.+++.
T Consensus       234 ~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         234 QCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             HHhcCChhhCcCHHHHHH
Confidence            9998 9999999999976


No 238
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94  E-value=1.3e-26  Score=247.48  Aligned_cols=181  Identities=26%  Similarity=0.405  Sum_probs=146.4

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccC-----
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-----   75 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~-----   75 (502)
                      |..||++-.++-+-+-|.|..+++|+..+.+|+++.|..|  +|||||||+|||||.+ |+|||+||||+..+.-     
T Consensus       710 YIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmG--FIHRDiKPDNILIDrd-GHIKLTDFGLCTGfRWTHdsk  786 (1034)
T KOG0608|consen  710 YIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRD-GHIKLTDFGLCTGFRWTHDSK  786 (1034)
T ss_pred             ccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhcc--ceecccCccceEEccC-Cceeeeeccccccceeccccc
Confidence            6789999999999999999999999999999999999999  9999999999999987 8999999999964420     


Q ss_pred             ----C----------------------------------CCcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh
Q 010730           76 ----S----------------------------------QQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT  116 (502)
Q Consensus        76 ----~----------------------------------~~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT  116 (502)
                          +                                  ...++.+||+.|+|||++. ..|+..+|+||.|||||||+.
T Consensus       787 YYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~  866 (1034)
T KOG0608|consen  787 YYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLV  866 (1034)
T ss_pred             cccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhh
Confidence                0                                  0124568999999999886 569999999999999999999


Q ss_pred             ccCCCCCCCChHHHHHHhhcC-CCCCcccccccHHHHHHHHHhhhCcCCCCC---HHHHhcCCCCcCCCCCC
Q 010730          117 SEYPYSECSNPAQIYKKVTSG-KLPGAFHRIQDAEARRFVGKCLENVSKRLP---AKELLLDPFLASDAGEP  184 (502)
Q Consensus       117 G~~Pf~~~~~~~ql~~kI~~g-~~p~~~~~~~s~~l~~LI~kcL~dP~kRpS---a~ELL~hPff~~~~~~~  184 (502)
                      |++||-........++.+.-. -+........+.++.++|.++...+..|+.   ++|+..||||+......
T Consensus       867 g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~sad~RLGkng~d~vKaHpfFkgIDfss  938 (1034)
T KOG0608|consen  867 GQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCCSADSRLGKNGADQVKAHPFFKGIDFSS  938 (1034)
T ss_pred             CCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhcChhhhhcccchhhhhcCccccccchHh
Confidence            999997633222222222111 111223345689999999999988888886   88899999999876544


No 239
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.94  E-value=4e-26  Score=222.18  Aligned_cols=168  Identities=24%  Similarity=0.379  Sum_probs=139.2

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.+|+|.+++.+.+.+++..+..++.||+.||+|||.++  |+||||||+||+++.+ +.+||+|||+++.........
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~nili~~~-~~~kl~df~~~~~~~~~~~~~  152 (257)
T cd05060          76 LAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKH--FVHRDLAARNVLLVNR-HQAKISDFGMSRALGAGSDYY  152 (257)
T ss_pred             eCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcC--eeccCcccceEEEcCC-CcEEeccccccceeecCCccc
Confidence            4678999999998888999999999999999999999998  9999999999999887 799999999998664332211


Q ss_pred             ----cccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           81 ----SVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        81 ----s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                          ...++..|+|||.+. ..++.++|||||||++|+|++ |.+||.. .+..++.+.+..+... ..+...+..++++
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l  230 (257)
T cd05060         153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGE-MKGAEVIAMLESGERL-PRPEECPQEIYSI  230 (257)
T ss_pred             ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCccc-CCHHHHHHHHHcCCcC-CCCCCCCHHHHHH
Confidence                122356799999775 458899999999999999998 9999976 4456667777665432 3344557889999


Q ss_pred             HHHhhh-CcCCCCCHHHHhc
Q 010730          155 VGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~  173 (502)
                      |.+||. +|.+||++.++++
T Consensus       231 i~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         231 MLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             HHHHhcCChhhCcCHHHHHH
Confidence            999998 9999999999886


No 240
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.94  E-value=2.4e-26  Score=226.53  Aligned_cols=169  Identities=24%  Similarity=0.408  Sum_probs=137.0

Q ss_pred             CCCCCcHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCc
Q 010730            1 MFTSGTLREYRKKYT----------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLA   70 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~----------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA   70 (502)
                      |+.+|+|.+|+.+..          .++...+..++.||+.||.|||+.+  ++||||||+||+++.+ +.+||+|||++
T Consensus        90 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~vH~dlkp~Nil~~~~-~~~~l~dfg~~  166 (277)
T cd05062          90 LMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAED-FTVKIGDFGMT  166 (277)
T ss_pred             cCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCcchheEEEcCC-CCEEECCCCCc
Confidence            578999999997632          3577889999999999999999988  9999999999999986 79999999998


Q ss_pred             eeccCCCC---cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccc
Q 010730           71 AILRGSQQ---AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHR  145 (502)
Q Consensus        71 ~~~~~~~~---~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~  145 (502)
                      ..+.....   .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+ .+...+.+.+..+..+ ..+.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~-~~~~~~~~~~~~~~~~-~~~~  244 (277)
T cd05062         167 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG-MSNEQVLRFVMEGGLL-DKPD  244 (277)
T ss_pred             cccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHcCCcC-CCCC
Confidence            75532211   122356788999998764 58999999999999999999 7889876 4556666666655543 2334


Q ss_pred             cccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          146 IQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       146 ~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      ..+..++++|.+||. +|.+|||+.|++.+
T Consensus       245 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         245 NCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            557789999999999 99999999999875


No 241
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.94  E-value=5.1e-28  Score=240.89  Aligned_cols=178  Identities=31%  Similarity=0.551  Sum_probs=148.1

Q ss_pred             CCCCCcHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CC
Q 010730            1 MFTSGTLREYRK-KYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~-k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~   78 (502)
                      |+-.|++.+.++ +.++|.+.++..+++..|.||+|||...  -||||||..|||++.+ |..||+|||+|.++... .+
T Consensus       109 YCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~--KIHRDIKAGNILLNT~-G~AKLADFGVAGQLTDTMAK  185 (502)
T KOG0574|consen  109 YCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLK--KIHRDIKAGNILLNTD-GIAKLADFGVAGQLTDTMAK  185 (502)
T ss_pred             hcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHH--HHHhhcccccEEEccc-chhhhhhccccchhhhhHHh
Confidence            556699999886 5678999999999999999999999887  8999999999999987 89999999999877543 33


Q ss_pred             cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcc--cccccHHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAF--HRIQDAEARRFV  155 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~--~~~~s~~l~~LI  155 (502)
                      ..+++|||.|||||++.. .|+.++||||||++..||..|++||.+......++- |-. +.|+.|  +...+.++-+||
T Consensus       186 RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM-IPT-~PPPTF~KPE~WS~~F~DFi  263 (502)
T KOG0574|consen  186 RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM-IPT-KPPPTFKKPEEWSSEFNDFI  263 (502)
T ss_pred             hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe-ccC-CCCCCCCChHhhhhHHHHHH
Confidence            578999999999999975 699999999999999999999999987544444432 211 222222  234578899999


Q ss_pred             HHhhh-CcCCCCCHHHHhcCCCCcCCCCC
Q 010730          156 GKCLE-NVSKRLPAKELLLDPFLASDAGE  183 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL~hPff~~~~~~  183 (502)
                      ++||. +|.+|.||.+|++|||++..+..
T Consensus       264 ~~CLiK~PE~R~TA~~L~~H~FiknA~g~  292 (502)
T KOG0574|consen  264 RSCLIKKPEERKTALRLCEHTFIKNAPGC  292 (502)
T ss_pred             HHHhcCCHHHHHHHHHHhhhhhhcCCCcc
Confidence            99998 99999999999999999876543


No 242
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.94  E-value=3.3e-26  Score=238.30  Aligned_cols=155  Identities=24%  Similarity=0.381  Sum_probs=127.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc---ccccCCCcccCcc
Q 010730           16 RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA---HSVIGTPEFMAPE   92 (502)
Q Consensus        16 ~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~---~s~vGTp~Y~APE   92 (502)
                      .+++..+..++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+++.+......   ....+++.|+|||
T Consensus       210 ~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nill~~~-~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  286 (375)
T cd05104         210 ALDTEDLLSFSYQVAKGMSFLASKN--CIHRDLAARNILLTHG-RITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPE  286 (375)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCchhhEEEECC-CcEEEecCccceeccCcccccccCCCCCCcceeChh
Confidence            4788899999999999999999998  9999999999999876 68999999999866432221   1234567899999


Q ss_pred             ccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhhh-CcCCCCCHH
Q 010730           93 LYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAK  169 (502)
Q Consensus        93 vl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~  169 (502)
                      ++. ..++.++|||||||++|+|++ |..||........+++.+..+..+ ..+...+.+++++|.+||. +|.+||++.
T Consensus       287 ~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~  365 (375)
T cd05104         287 SIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM-LSPECAPSEMYDIMKSCWDADPLKRPTFK  365 (375)
T ss_pred             HhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC-CCCCCCCHHHHHHHHHHccCChhHCcCHH
Confidence            875 458999999999999999998 899998766666777777665433 2334457889999999999 999999999


Q ss_pred             HHhcC
Q 010730          170 ELLLD  174 (502)
Q Consensus       170 ELL~h  174 (502)
                      |+++.
T Consensus       366 eil~~  370 (375)
T cd05104         366 QIVQL  370 (375)
T ss_pred             HHHHH
Confidence            99874


No 243
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.94  E-value=2.2e-26  Score=253.14  Aligned_cols=179  Identities=25%  Similarity=0.336  Sum_probs=130.1

Q ss_pred             CCCCCcHHHHHHhCCC--------------------CCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCC
Q 010730            1 MFTSGTLREYRKKYTR--------------------VDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLG   60 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~--------------------L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g   60 (502)
                      |+.+|+|.+++.....                    .....++.++.||+.||+|||+++  |+||||||+|||++...+
T Consensus       216 y~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g--IiHRDLKP~NILl~~~~~  293 (566)
T PLN03225        216 YEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG--IVHRDVKPQNIIFSEGSG  293 (566)
T ss_pred             ecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC--EEeCcCCHHHEEEeCCCC
Confidence            5678899999865321                    123457789999999999999998  999999999999987557


Q ss_pred             cEEEEecCCceeccCC--CCcccccCCCcccCcccccc-----------------------CCCCcccchhHHHHHHHHh
Q 010730           61 QIKIGDLGLAAILRGS--QQAHSVIGTPEFMAPELYEE-----------------------DYNELVDIYSFGMCVLEML  115 (502)
Q Consensus        61 ~vKL~DFGlA~~~~~~--~~~~s~vGTp~Y~APEvl~~-----------------------~ys~~~DIWSLGviLyeLL  115 (502)
                      .+||+|||+++.+...  ......+||+.|+|||++..                       .+..++|||||||+||||+
T Consensus       294 ~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~  373 (566)
T PLN03225        294 SFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMA  373 (566)
T ss_pred             cEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHH
Confidence            8999999999865432  22346789999999996521                       2345679999999999999


Q ss_pred             hccCCCCCCCChHHHHHHhhcCCCC-------------Cc------ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCC
Q 010730          116 TSEYPYSECSNPAQIYKKVTSGKLP-------------GA------FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDP  175 (502)
Q Consensus       116 TG~~Pf~~~~~~~ql~~kI~~g~~p-------------~~------~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hP  175 (502)
                      ++..|+.  .+..++.+.+......             ..      .....+....+||.+||. ||.+|||++|+|+||
T Consensus       374 ~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hp  451 (566)
T PLN03225        374 FPNLRSD--SNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHP  451 (566)
T ss_pred             hCcCCCc--hHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCc
Confidence            9876653  2333333333222111             00      001112345689999998 999999999999999


Q ss_pred             CCcCCCCC
Q 010730          176 FLASDAGE  183 (502)
Q Consensus       176 ff~~~~~~  183 (502)
                      ||+.....
T Consensus       452 ff~~~~~~  459 (566)
T PLN03225        452 YFDREGLL  459 (566)
T ss_pred             CcCCCCcc
Confidence            99865443


No 244
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.94  E-value=3.3e-26  Score=234.80  Aligned_cols=155  Identities=23%  Similarity=0.383  Sum_probs=126.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC---CcccccCCCcccCcc
Q 010730           16 RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ---QAHSVIGTPEFMAPE   92 (502)
Q Consensus        16 ~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~---~~~s~vGTp~Y~APE   92 (502)
                      ++++..+..++.||+.||+|||+++  |+||||||+||+++.+ +.+||+|||++..+....   ......+++.|+|||
T Consensus       169 ~l~~~~~~~~~~qi~~aL~~lH~~~--ivHrDikp~Nill~~~-~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  245 (337)
T cd05054         169 PLTLEDLISYSFQVARGMEFLASRK--CIHRDLAARNILLSEN-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE  245 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEEeCC-CcEEEeccccchhcccCcchhhccCCCCCccccCcH
Confidence            6889999999999999999999998  9999999999999976 789999999998653221   123345678899999


Q ss_pred             ccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhhh-CcCCCCCHH
Q 010730           93 LYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAK  169 (502)
Q Consensus        93 vl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~  169 (502)
                      ++. ..++.++|||||||++|+|++ |..||.+......+...+..+..+ ..+...++++.+++.+||. +|.+||++.
T Consensus       246 ~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~RPs~~  324 (337)
T cd05054         246 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRM-RAPEYATPEIYSIMLDCWHNNPEDRPTFS  324 (337)
T ss_pred             HhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCC-CCCccCCHHHHHHHHHHccCChhhCcCHH
Confidence            775 558999999999999999998 999997644444444555444332 3334557889999999998 999999999


Q ss_pred             HHhcC
Q 010730          170 ELLLD  174 (502)
Q Consensus       170 ELL~h  174 (502)
                      |++++
T Consensus       325 ell~~  329 (337)
T cd05054         325 ELVEI  329 (337)
T ss_pred             HHHHH
Confidence            99986


No 245
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.94  E-value=4.4e-26  Score=223.93  Aligned_cols=170  Identities=34%  Similarity=0.488  Sum_probs=135.8

Q ss_pred             CCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCccc
Q 010730            4 SGTLREYRKKYT--RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS   81 (502)
Q Consensus         4 gGsL~~yi~k~~--~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s   81 (502)
                      +++|.+++.+..  .+++..++.++.||+.||.|||+.+  ++|+||||+||+++.+ +.+||+|||++...........
T Consensus        89 ~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~--i~h~~l~~~nili~~~-~~~~l~dfg~~~~~~~~~~~~~  165 (287)
T cd07838          89 DQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR--IVHRDLKPQNILVTSD-GQVKIADFGLARIYSFEMALTS  165 (287)
T ss_pred             ccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhEEEccC-CCEEEeccCcceeccCCccccc
Confidence            468999987743  4999999999999999999999998  9999999999999988 7999999999987655444455


Q ss_pred             ccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcC-CC-----------------C--
Q 010730           82 VIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSG-KL-----------------P--  140 (502)
Q Consensus        82 ~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g-~~-----------------p--  140 (502)
                      ..+++.|+|||++. ..++.++|+|||||++|+|++|.+||..... .+.+.++... ..                 +  
T Consensus       166 ~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (287)
T cd07838         166 VVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSY  244 (287)
T ss_pred             ccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcCCCChHhcCCCcccchhhcccc
Confidence            67899999999875 4588899999999999999999999976433 3333333210 00                 0  


Q ss_pred             --Ccc---cccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          141 --GAF---HRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       141 --~~~---~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                        ..+   ....+..+.++|.+||. +|.+||++.++|.||||
T Consensus       245 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         245 TPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             cccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence              000   01124678899999998 99999999999999997


No 246
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.94  E-value=2.3e-26  Score=227.01  Aligned_cols=174  Identities=28%  Similarity=0.546  Sum_probs=142.8

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~   79 (502)
                      |+.||+|.+++.. +++++..+..++.||+.||+|||+.+  ++|+||+|+||+++.+ +.++|+|||++..+.... ..
T Consensus        83 ~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~--ivH~dl~p~Nil~~~~-~~~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06640          83 YLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEK--KIHRDIKAANVLLSEQ-GDVKLADFGVAGQLTDTQIKR  158 (277)
T ss_pred             cCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--ccCcCCChhhEEEcCC-CCEEEcccccceeccCCcccc
Confidence            5789999999975 56899999999999999999999988  9999999999999876 789999999997664322 22


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ....++..|+|||++.+ .++.++|+|||||++|+|+||..||... .+......+..+.. .......+..+.++|.+|
T Consensus       159 ~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~  236 (277)
T cd06640         159 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM-HPMRVLFLIPKNNP-PTLTGEFSKPFKEFIDAC  236 (277)
T ss_pred             ccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCc-ChHhHhhhhhcCCC-CCCchhhhHHHHHHHHHH
Confidence            34568999999998754 4788999999999999999999999763 34444444433332 234444577899999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcCC
Q 010730          159 LE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      |. +|.+||++.+++.||||...
T Consensus       237 l~~~p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06640         237 LNKDPSFRPTAKELLKHKFIVKN  259 (277)
T ss_pred             cccCcccCcCHHHHHhChHhhhc
Confidence            98 99999999999999999644


No 247
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=99.94  E-value=2.6e-26  Score=233.82  Aligned_cols=175  Identities=28%  Similarity=0.450  Sum_probs=138.0

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC-----
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-----   78 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~-----   78 (502)
                      +|+|.+++...+.+++..++.++.||+.||.|||.++  |+||||||+||+++.+ +.+||+|||++........     
T Consensus        91 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~  167 (334)
T cd07855          91 ESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSAN--VIHRDLKPSNLLVNED-CELRIGDFGMARGLSSSPTEHKYF  167 (334)
T ss_pred             hhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCC-CcEEecccccceeecccCcCCCcc
Confidence            5789999988888999999999999999999999998  9999999999999986 7999999999976543221     


Q ss_pred             cccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhh-cCC-----------------
Q 010730           79 AHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVT-SGK-----------------  138 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~-~g~-----------------  138 (502)
                      ....+|+..|+|||++..  .++.++|||||||++|+|++|..||.+.....++...+. .|.                 
T Consensus       168 ~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  247 (334)
T cd07855         168 MTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKY  247 (334)
T ss_pred             cccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHH
Confidence            234578999999998753  488999999999999999999999976432222111000 000                 


Q ss_pred             ---CC----Cc---ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          139 ---LP----GA---FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       139 ---~p----~~---~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                         .+    ..   .....+..++++|.+||. +|.+||++.+++.||||....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~  301 (334)
T cd07855         248 IQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYH  301 (334)
T ss_pred             HhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhcc
Confidence               00    00   112347889999999998 999999999999999997543


No 248
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.94  E-value=3.4e-26  Score=222.03  Aligned_cols=169  Identities=28%  Similarity=0.474  Sum_probs=141.5

Q ss_pred             CCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-
Q 010730            1 MFTSGTLREYRKK--YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k--~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-   77 (502)
                      |+.+|+|.+++..  ...+++..++.|+.||+.||.|||+++  |+|+||||+||+++.+ +.++|+|||++....... 
T Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dl~p~nili~~~-~~~~l~dfg~~~~~~~~~~  155 (255)
T cd08219          79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR--VLHRDIKSKNIFLTQN-GKVKLGDFGSARLLTSPGA  155 (255)
T ss_pred             eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEECCC-CcEEEcccCcceeeccccc
Confidence            5789999999865  345899999999999999999999998  9999999999999876 799999999997664322 


Q ss_pred             CcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHH
Q 010730           78 QAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVG  156 (502)
Q Consensus        78 ~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~  156 (502)
                      ......|++.|+|||++.+ .++.++|+||||+++|+|++|..||.. .+...++..+..+..+. .+...+..++++|.
T Consensus       156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~  233 (255)
T cd08219         156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQA-NSWKNLILKVCQGSYKP-LPSHYSYELRSLIK  233 (255)
T ss_pred             ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCC-CCHHHHHHHHhcCCCCC-CCcccCHHHHHHHH
Confidence            2334679999999998864 488899999999999999999999976 55566666666665542 33445788999999


Q ss_pred             Hhhh-CcCCCCCHHHHhcC
Q 010730          157 KCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       157 kcL~-dP~kRpSa~ELL~h  174 (502)
                      +||. +|.+||++.+++.-
T Consensus       234 ~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         234 QMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHhCCcccCCCHHHHhhc
Confidence            9999 99999999999874


No 249
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.94  E-value=5.1e-26  Score=222.51  Aligned_cols=169  Identities=24%  Similarity=0.386  Sum_probs=139.0

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++...  ..+++..++.++.||+.||+|||+.+  |+||||||+||+++.+ +.+||+|||++........
T Consensus        83 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~nil~~~~-~~~kl~df~~~~~~~~~~~  159 (263)
T cd05052          83 FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGEN-HLVKVADFGLSRLMTGDTY  159 (263)
T ss_pred             eCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcCC-CcEEeCCCcccccccccee
Confidence            57899999999764  35899999999999999999999988  9999999999999876 7899999999976543221


Q ss_pred             c--ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 A--HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 ~--~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      .  ....+++.|+|||.+. ..++.++|||||||++|+|++ |..||.+ .+..++++.+..+..+ ..+...+..+.++
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  237 (263)
T cd05052         160 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLEKGYRM-ERPEGCPPKVYEL  237 (263)
T ss_pred             eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHCCCCC-CCCCCCCHHHHHH
Confidence            1  1223467899999775 458889999999999999998 9999976 5667777777665332 3445567899999


Q ss_pred             HHHhhh-CcCCCCCHHHHhcC
Q 010730          155 VGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~h  174 (502)
                      |.+||. +|.+||++.++++.
T Consensus       238 i~~cl~~~p~~Rp~~~~l~~~  258 (263)
T cd05052         238 MRACWQWNPSDRPSFAEIHQA  258 (263)
T ss_pred             HHHHccCCcccCCCHHHHHHH
Confidence            999998 99999999999863


No 250
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.94  E-value=3.2e-26  Score=225.55  Aligned_cols=174  Identities=31%  Similarity=0.486  Sum_probs=137.8

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~   79 (502)
                      |+.+++|.++....+.+++..++.++.||+.||+|||+.+  |+|+||+|+||+++.+ +.+||+|||++..+.... ..
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~h~~l~p~ni~~~~~-~~~~l~dfg~~~~~~~~~~~~  157 (286)
T cd07846          81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN--IIHRDIKPENILVSQS-GVVKLCDFGFARTLAAPGEVY  157 (286)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCC-CcEEEEeeeeeeeccCCcccc
Confidence            5678889888877777999999999999999999999998  9999999999999876 799999999998764332 23


Q ss_pred             ccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc-------------------CC
Q 010730           80 HSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS-------------------GK  138 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~-------------------g~  138 (502)
                      ....+++.|+|||++.+  .++.++||||||+++|+|++|.+||........+.+....                   +.
T Consensus       158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T cd07846         158 TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGM  237 (286)
T ss_pred             CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcc
Confidence            34678999999998754  3778999999999999999999999764433332221110                   00


Q ss_pred             -CCCc--------ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          139 -LPGA--------FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       139 -~p~~--------~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                       .+..        .....+..+.+|+.+||. +|.+||++.++|+||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         238 RLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             ccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence             0000        011236779999999998 99999999999999997


No 251
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.94  E-value=1.4e-27  Score=250.92  Aligned_cols=171  Identities=28%  Similarity=0.494  Sum_probs=148.6

Q ss_pred             CcHHHHH-H-hCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCC--CCcEEEEecCCceeccCCCCcc
Q 010730            5 GTLREYR-K-KYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGH--LGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         5 GsL~~yi-~-k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~--~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+..+.| . ..++|++...+.++.|||.||.|||-.+  |+|+||||+|||+...  ..++||||||+|+++.......
T Consensus       647 GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn--IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRr  724 (888)
T KOG4236|consen  647 GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN--IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRR  724 (888)
T ss_pred             chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc--eeeccCCchheeeccCCCCCceeeccccceeecchhhhhh
Confidence            4555555 2 4678999999999999999999999999  9999999999999754  4689999999999999888889


Q ss_pred             cccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcC--CCCCcccccccHHHHHHHHH
Q 010730           81 SVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSG--KLPGAFHRIQDAEARRFVGK  157 (502)
Q Consensus        81 s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g--~~p~~~~~~~s~~l~~LI~k  157 (502)
                      +++|||.|+|||++. ..|+...|+||+|||+|.-|+|.+||.+.   ++|-++|++.  .+|...|.-+++++-+||..
T Consensus       725 sVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd---EdIndQIQNAaFMyPp~PW~eis~~AidlIn~  801 (888)
T KOG4236|consen  725 SVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED---EDINDQIQNAAFMYPPNPWSEISPEAIDLINN  801 (888)
T ss_pred             hhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc---cchhHHhhccccccCCCchhhcCHHHHHHHHH
Confidence            999999999999986 45999999999999999999999999664   4455566554  34666667778999999999


Q ss_pred             hhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          158 CLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       158 cL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      +|+ +..+|.|++..|.|||++..
T Consensus       802 LLqVkm~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  802 LLQVKMRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             HHHHHHHHhcchHhhccchhhhcc
Confidence            999 99999999999999999864


No 252
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=99.94  E-value=2e-26  Score=227.11  Aligned_cols=173  Identities=29%  Similarity=0.546  Sum_probs=141.2

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC-c
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-A   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~-~   79 (502)
                      |+.+|+|.+++.. +.+++..++.++.||+.||.|||+++  |+|+||+|+||+++.+ +.+||+|||++..+..... .
T Consensus        83 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--ivH~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06642          83 YLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSER--KIHRDIKAANVLLSEQ-GDVKLADFGVAGQLTDTQIKR  158 (277)
T ss_pred             ccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCC--eeccCCChheEEEeCC-CCEEEccccccccccCcchhh
Confidence            5788999999865 56899999999999999999999988  9999999999999876 7899999999976543221 2


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ....|+..|+|||++.+ .++.++|+|||||++|+|++|..||... .+..+...+..+..+ .+....+..+.++|.+|
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~  236 (277)
T cd06642         159 NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL-HPMRVLFLIPKNSPP-TLEGQYSKPFKEFVEAC  236 (277)
T ss_pred             hcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCccc-chhhHHhhhhcCCCC-CCCcccCHHHHHHHHHH
Confidence            33568999999998864 4788999999999999999999999753 333333333333322 33344567899999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcC
Q 010730          159 LE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~  179 (502)
                      |. +|.+||++.+++.||||..
T Consensus       237 l~~~p~~Rp~~~~il~~~~~~~  258 (277)
T cd06642         237 LNKDPRFRPTAKELLKHKFITR  258 (277)
T ss_pred             ccCCcccCcCHHHHHHhHHHHH
Confidence            98 9999999999999999964


No 253
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.94  E-value=4.8e-26  Score=222.03  Aligned_cols=169  Identities=19%  Similarity=0.316  Sum_probs=138.5

Q ss_pred             CCCCCcHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc
Q 010730            1 MFTSGTLREYRKKY------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR   74 (502)
Q Consensus         1 ~~tgGsL~~yi~k~------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~   74 (502)
                      |+.+|+|.+++...      ..+++..+..++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||+++...
T Consensus        88 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~--i~H~dlkp~Nil~~~~-~~~kl~dfg~~~~~~  164 (273)
T cd05035          88 FMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN--FIHRDLAARNCMLRED-MTVCVADFGLSKKIY  164 (273)
T ss_pred             ccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccchheEEECCC-CeEEECCccceeecc
Confidence            56889999998543      36899999999999999999999988  9999999999999876 789999999998654


Q ss_pred             CCCC---cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccH
Q 010730           75 GSQQ---AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDA  149 (502)
Q Consensus        75 ~~~~---~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~  149 (502)
                      ....   .....++..|+|||++.. .++.++|||||||++|+|++ |..||.+ ....++++.+..+..+. .+...+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~-~~~~~~~  242 (273)
T cd05035         165 SGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPG-VENHEIYDYLRHGNRLK-QPEDCLD  242 (273)
T ss_pred             ccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHcCCCCC-CCcCCCH
Confidence            3221   112335678999998754 58899999999999999999 8999976 45566777777665432 3445678


Q ss_pred             HHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          150 EARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       150 ~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .+.++|.+||. +|.+||++.|++.+
T Consensus       243 ~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         243 ELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999 99999999999875


No 254
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.94  E-value=3.7e-26  Score=226.73  Aligned_cols=171  Identities=28%  Similarity=0.468  Sum_probs=132.6

Q ss_pred             CCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CCccc
Q 010730            4 SGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQAHS   81 (502)
Q Consensus         4 gGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~~~s   81 (502)
                      +++|.+++.. .+.+.+..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||+++..... .....
T Consensus        86 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nil~~~~-~~~~l~Dfg~~~~~~~~~~~~~~  162 (291)
T cd07870          86 HTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH--ILHRDLKPQNLLISYL-GELKLADFGLARAKSIPSQTYSS  162 (291)
T ss_pred             cCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEEcCC-CcEEEeccccccccCCCCCCCCC
Confidence            5788887765 356889999999999999999999998  9999999999999876 79999999998754322 12234


Q ss_pred             ccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc--C-----------CCC----Cc
Q 010730           82 VIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS--G-----------KLP----GA  142 (502)
Q Consensus        82 ~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~--g-----------~~p----~~  142 (502)
                      ..+++.|+|||++.+  .++.++|||||||++|+|++|..||.......+...++..  +           ..+    ..
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (291)
T cd07870         163 EVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEW  242 (291)
T ss_pred             ccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchh
Confidence            568999999998854  4788999999999999999999999765443333222211  0           000    00


Q ss_pred             ------------cc-ccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          143 ------------FH-RIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       143 ------------~~-~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                                  +. ...+..+.+++.+||. +|.+|||+.|+|.||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         243 FLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             ccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence                        00 0125688999999999 99999999999999997


No 255
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.94  E-value=3.7e-26  Score=233.20  Aligned_cols=173  Identities=27%  Similarity=0.390  Sum_probs=138.2

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CCcccc
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQAHSV   82 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~~~s~   82 (502)
                      +++|.+++.+.+++++..++.++.||+.||.|||+++  ++||||||+||+++.+ +.+||+|||++...... ......
T Consensus        92 ~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dlkp~Nil~~~~-~~~kL~Dfg~~~~~~~~~~~~~~~  168 (337)
T cd07858          92 DTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSAN--VLHRDLKPSNLLLNAN-CDLKICDFGLARTTSEKGDFMTEY  168 (337)
T ss_pred             CCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCC-CCEEECcCccccccCCCccccccc
Confidence            5799999998889999999999999999999999998  9999999999999876 79999999999865433 233456


Q ss_pred             cCCCcccCccccc--cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhh---cC--------------------
Q 010730           83 IGTPEFMAPELYE--EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVT---SG--------------------  137 (502)
Q Consensus        83 vGTp~Y~APEvl~--~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~---~g--------------------  137 (502)
                      .++..|+|||++.  ..++.++|||||||++|+|++|..||.+.. ....+..+.   ..                    
T Consensus       169 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (337)
T cd07858         169 VVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKD-YVHQLKLITELLGSPSEEDLGFIRNEKARRYIRS  247 (337)
T ss_pred             ccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHh
Confidence            7899999999775  358899999999999999999999996532 211111111   00                    


Q ss_pred             ----CCC--CcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          138 ----KLP--GAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       138 ----~~p--~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                          ..+  .......++.++++|.+||. +|.+|||++++|.||||...
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         248 LPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             cCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence                000  01122357789999999999 99999999999999999753


No 256
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.94  E-value=3.4e-26  Score=247.87  Aligned_cols=176  Identities=27%  Similarity=0.410  Sum_probs=131.2

Q ss_pred             CCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            4 SGTLREYRKKY-----TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         4 gGsL~~yi~k~-----~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      +++|.+++...     .......++.++.||+.||+|||+++  ||||||||+|||++.+ +.+||+|||+++.+.....
T Consensus       246 ~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g--IiHrDLKP~NILl~~~-~~vkL~DFGla~~~~~~~~  322 (501)
T PHA03210        246 DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK--LIHRDIKLENIFLNCD-GKIVLGDFGTAMPFEKERE  322 (501)
T ss_pred             ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC-CCEEEEeCCCceecCcccc
Confidence            56788887542     23446778899999999999999998  9999999999999876 7999999999987654322


Q ss_pred             --cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCC-C-CC-hHHHHHHhhcCC-----CCC------
Q 010730           79 --AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSE-C-SN-PAQIYKKVTSGK-----LPG------  141 (502)
Q Consensus        79 --~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~-~-~~-~~ql~~kI~~g~-----~p~------  141 (502)
                        ....+||+.|+|||++.+ .|+.++|||||||++|+|++|.+++.. . .+ ..++.+.+....     +|.      
T Consensus       323 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  402 (501)
T PHA03210        323 AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLF  402 (501)
T ss_pred             cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHH
Confidence              234689999999998864 589999999999999999998765432 2 12 233333222110     110      


Q ss_pred             -------------c----c-cccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCCC
Q 010730          142 -------------A----F-HRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAG  182 (502)
Q Consensus       142 -------------~----~-~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~~  182 (502)
                                   .    + ....+..+.++|.+||. ||.+||||.|+|.||||.....
T Consensus       403 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~  462 (501)
T PHA03210        403 DYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEE  462 (501)
T ss_pred             HHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCc
Confidence                         0    0 00134567788999999 9999999999999999976543


No 257
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=99.94  E-value=5.5e-26  Score=225.72  Aligned_cols=176  Identities=28%  Similarity=0.522  Sum_probs=139.9

Q ss_pred             CCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC
Q 010730            1 MFTSGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k----~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~   76 (502)
                      |+.+|+|.+++..    ...+++..+..++.||+.||.|||+.+  ++|+||+|+||+++.+ +.++|+|||++......
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~--i~H~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~  158 (287)
T cd06621          82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK--IIHRDIKPSNILLTRK-GQVKLCDFGVSGELVNS  158 (287)
T ss_pred             ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEecC-CeEEEeecccccccccc
Confidence            5678999998753    356899999999999999999999998  9999999999999876 78999999998765432


Q ss_pred             CCcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCC----CChHHHHHHhhcCCCCC---ccc--cc
Q 010730           77 QQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSEC----SNPAQIYKKVTSGKLPG---AFH--RI  146 (502)
Q Consensus        77 ~~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~----~~~~ql~~kI~~g~~p~---~~~--~~  146 (502)
                      . .....++..|+|||.+. ..++.++|||||||++|+|++|..||...    ....++...+.....+.   ...  ..
T Consensus       159 ~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T cd06621         159 L-AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIK  237 (287)
T ss_pred             c-cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCc
Confidence            2 22456789999999775 45889999999999999999999999764    23344454444322221   111  12


Q ss_pred             ccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          147 QDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       147 ~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      .++.+++||.+||. +|.+|||+.|++.||||+..
T Consensus       238 ~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~  272 (287)
T cd06621         238 WSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ  272 (287)
T ss_pred             hHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence            35789999999998 99999999999999999643


No 258
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.94  E-value=4.4e-26  Score=224.97  Aligned_cols=169  Identities=20%  Similarity=0.309  Sum_probs=138.8

Q ss_pred             CCCCCcHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEE
Q 010730            1 MFTSGTLREYRKKY----------------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKI   64 (502)
Q Consensus         1 ~~tgGsL~~yi~k~----------------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL   64 (502)
                      |+.+++|.+++...                ..+++..+..++.||+.||+|||+++  |+||||||+||+++.+ +.+||
T Consensus        89 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g--i~H~dlkp~Nil~~~~-~~~kl  165 (283)
T cd05091          89 YCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH--VVHKDLATRNVLVFDK-LNVKI  165 (283)
T ss_pred             cCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC--ccccccchhheEecCC-CceEe
Confidence            46789999998532                34888899999999999999999998  9999999999999876 68999


Q ss_pred             EecCCceeccCCCC---cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCC
Q 010730           65 GDLGLAAILRGSQQ---AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKL  139 (502)
Q Consensus        65 ~DFGlA~~~~~~~~---~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~  139 (502)
                      +|||+++.......   .....+++.|+|||++. +.++.++|||||||++|+|++ |..||.+ ....+++..+..+..
T Consensus       166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~-~~~~~~~~~i~~~~~  244 (283)
T cd05091         166 SDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG-YSNQDVIEMIRNRQV  244 (283)
T ss_pred             cccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHcCCc
Confidence            99999876533221   23445678999999774 568999999999999999998 8888876 456677888877665


Q ss_pred             CCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          140 PGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       140 p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      + ..+...+..+.+++..||+ +|.+||++++++..
T Consensus       245 ~-~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         245 L-PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             C-CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            3 2334467889999999998 99999999999874


No 259
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.94  E-value=5.9e-26  Score=225.61  Aligned_cols=175  Identities=23%  Similarity=0.386  Sum_probs=140.5

Q ss_pred             CCCCCcHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCc
Q 010730            1 MFTSGTLREYRKKYT----------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLA   70 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~----------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA   70 (502)
                      |+.+|+|.+++.+.+          .+....+..++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++
T Consensus        90 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dikp~nili~~~-~~~~L~Dfg~~  166 (288)
T cd05061          90 LMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHD-FTVKIGDFGMT  166 (288)
T ss_pred             CCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcCCCCChheEEEcCC-CcEEECcCCcc
Confidence            578999999997632          3466788999999999999999998  9999999999999986 79999999998


Q ss_pred             eeccCCCC---cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccc
Q 010730           71 AILRGSQQ---AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHR  145 (502)
Q Consensus        71 ~~~~~~~~---~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~  145 (502)
                      +.+.....   .....++..|+|||.+. +.++.++|||||||++|+|++ |..||.+ ....++++.+..+..+. ...
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~-~~~~~~~~~~~~~~~~~-~~~  244 (288)
T cd05061         167 RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG-LSNEQVLKFVMDGGYLD-QPD  244 (288)
T ss_pred             ccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHcCCCCC-CCC
Confidence            76533221   12234577899999875 458999999999999999999 7889976 45566666666554432 233


Q ss_pred             cccHHHHHHHHHhhh-CcCCCCCHHHHhc------CCCCcCC
Q 010730          146 IQDAEARRFVGKCLE-NVSKRLPAKELLL------DPFLASD  180 (502)
Q Consensus       146 ~~s~~l~~LI~kcL~-dP~kRpSa~ELL~------hPff~~~  180 (502)
                      ..++.+++++.+||. +|.+|||+.++++      ||||++-
T Consensus       245 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~  286 (288)
T cd05061         245 NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV  286 (288)
T ss_pred             CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence            446889999999998 9999999999986      7888653


No 260
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.94  E-value=4.6e-26  Score=224.02  Aligned_cols=169  Identities=24%  Similarity=0.357  Sum_probs=135.0

Q ss_pred             CCCCCcHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEE
Q 010730            1 MFTSGTLREYRKKYT----------------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKI   64 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~----------------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL   64 (502)
                      |+.+|+|.+++.+..                .+++..++.++.||+.||+|||+.+  ++||||||+||+++.+ +.+||
T Consensus        77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nili~~~-~~~kl  153 (270)
T cd05047          77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGEN-YVAKI  153 (270)
T ss_pred             eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccccceEEEcCC-CeEEE
Confidence            567899999997643                4789999999999999999999988  9999999999999887 79999


Q ss_pred             EecCCceeccCCCCcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCc
Q 010730           65 GDLGLAAILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGA  142 (502)
Q Consensus        65 ~DFGlA~~~~~~~~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~  142 (502)
                      +|||++..............++.|+|||++. ..++.++|||||||++|+|++ |..||.+ .+...+++.+..+... .
T Consensus       154 ~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~-~~~~~~~~~~~~~~~~-~  231 (270)
T cd05047         154 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG-MTCAELYEKLPQGYRL-E  231 (270)
T ss_pred             CCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccc-cCHHHHHHHHhCCCCC-C
Confidence            9999986432211111223466799999875 458899999999999999997 9999966 4555666666554332 2


Q ss_pred             ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          143 FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       143 ~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .+...+.++.+++.+||. +|.+||++.+++..
T Consensus       232 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  264 (270)
T cd05047         232 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  264 (270)
T ss_pred             CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            333457789999999998 99999999999863


No 261
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, 
Probab=99.94  E-value=3.4e-26  Score=226.87  Aligned_cols=169  Identities=25%  Similarity=0.401  Sum_probs=138.8

Q ss_pred             CCCCCcHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEE
Q 010730            1 MFTSGTLREYRKKY----------------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKI   64 (502)
Q Consensus         1 ~~tgGsL~~yi~k~----------------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL   64 (502)
                      |+.+|+|.+++...                +.+++..+..++.||+.||+|||+.+  |+||||||+|||++.+ +.+||
T Consensus        97 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~Nil~~~~-~~~kL  173 (293)
T cd05053          97 YAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK--CIHRDLAARNVLVTED-HVMKI  173 (293)
T ss_pred             eCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC--ccccccceeeEEEcCC-CeEEe
Confidence            56899999999642                45899999999999999999999988  9999999999999876 79999


Q ss_pred             EecCCceeccCCCC---cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCC
Q 010730           65 GDLGLAAILRGSQQ---AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKL  139 (502)
Q Consensus        65 ~DFGlA~~~~~~~~---~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~  139 (502)
                      +|||+++.+.....   .....+++.|+|||++. ..++.++|||||||++|+|++ |..||.. ....++++.+..+..
T Consensus       174 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~-~~~~~~~~~~~~~~~  252 (293)
T cd05053         174 ADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG-IPVEELFKLLKEGYR  252 (293)
T ss_pred             CccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCC-CCHHHHHHHHHcCCc
Confidence            99999986543221   12223567899999765 458999999999999999998 9999976 456677777766654


Q ss_pred             CCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          140 PGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       140 p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      +. .+...+..+.+|+.+||. +|.+|||+.|++++
T Consensus       253 ~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         253 ME-KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             CC-CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            32 334457889999999998 99999999999975


No 262
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.94  E-value=5.6e-26  Score=222.71  Aligned_cols=171  Identities=27%  Similarity=0.436  Sum_probs=136.7

Q ss_pred             CCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cccc
Q 010730            4 SGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QAHS   81 (502)
Q Consensus         4 gGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~~s   81 (502)
                      +++|.+++... ..+++..+..++.||+.||.|||.++  |+|+||||+||+++.+ +.+||+|||.+....... ....
T Consensus        81 ~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~~-~~~~l~df~~~~~~~~~~~~~~~  157 (283)
T cd05118          81 DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG--ILHRDLKPENLLINTE-GVLKLADFGLARSFGSPVRPYTH  157 (283)
T ss_pred             CCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC--eeecCcCHHHEEECCC-CcEEEeeeeeeEecCCCcccccC
Confidence            46888888764 68999999999999999999999998  9999999999999976 789999999998765433 2334


Q ss_pred             ccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC--CC----------------
Q 010730           82 VIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL--PG----------------  141 (502)
Q Consensus        82 ~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~--p~----------------  141 (502)
                      ..++..|+|||.+.+  .++.++|+||||+++|+|+||+.||.......++.+.......  +.                
T Consensus       158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T cd05118         158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF  237 (283)
T ss_pred             ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence            568899999997753  4788999999999999999999999775544443332221100  00                


Q ss_pred             ---------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          142 ---------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       142 ---------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                               ......+..+++||.+||. +|.+||++.+++.||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         238 PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence                     0111246789999999999 99999999999999997


No 263
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.94  E-value=4.5e-26  Score=226.42  Aligned_cols=175  Identities=27%  Similarity=0.380  Sum_probs=136.1

Q ss_pred             CCcHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Ccc
Q 010730            4 SGTLREYRKKYTR--VDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QAH   80 (502)
Q Consensus         4 gGsL~~yi~k~~~--L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~~   80 (502)
                      +++|.+++.....  +++..++.++.||+.||+|||+++  |+||||||+||+++...+.+||+|||++....... ...
T Consensus        84 ~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~  161 (294)
T PLN00009         84 DLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR--VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFT  161 (294)
T ss_pred             cccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCcceEEEECCCCEEEEcccccccccCCCccccc
Confidence            5688888876443  588899999999999999999998  99999999999998654679999999997653322 223


Q ss_pred             cccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCC--Cc--------------
Q 010730           81 SVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLP--GA--------------  142 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p--~~--------------  142 (502)
                      ...+++.|+|||++.+  .++.++|||||||++|+|+||.+||........+.+.+..-..+  ..              
T Consensus       162 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (294)
T PLN00009        162 HEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAF  241 (294)
T ss_pred             cCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhc
Confidence            4578899999998754  47889999999999999999999997754444444322110000  00              


Q ss_pred             ----------ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          143 ----------FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       143 ----------~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                                .....+..+.++|.+||. +|.+||++.++|.||||...
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~  290 (294)
T PLN00009        242 PKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL  290 (294)
T ss_pred             ccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence                      012246788999999998 99999999999999999753


No 264
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.94  E-value=6.6e-26  Score=230.30  Aligned_cols=176  Identities=28%  Similarity=0.344  Sum_probs=138.5

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-------
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-------   76 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-------   76 (502)
                      +|+|.+++.....+++..+..++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++......       
T Consensus       103 ~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~--i~H~dl~~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~  179 (335)
T PTZ00024        103 ASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWY--FMHRDLSPANIFINSK-GICKIADFGLARRYGYPPYSDTLS  179 (335)
T ss_pred             ccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccccHHHeEECCC-CCEEECCccceeeccccccccccc
Confidence            5799999998888999999999999999999999998  9999999999999876 79999999999765411       


Q ss_pred             --------CCcccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc-C--CCCCc-
Q 010730           77 --------QQAHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS-G--KLPGA-  142 (502)
Q Consensus        77 --------~~~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~-g--~~p~~-  142 (502)
                              .......+++.|+|||++.+  .++.++|||||||++|+|++|.+||........ +..+.. .  ..+.. 
T Consensus       180 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-~~~i~~~~~~~~~~~~  258 (335)
T PTZ00024        180 KDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQ-LGRIFELLGTPNEDNW  258 (335)
T ss_pred             ccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCchhhC
Confidence                    11223457889999998754  378899999999999999999999976443333 322221 0  00000 


Q ss_pred             ----------------------ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCCCC
Q 010730          143 ----------------------FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGE  183 (502)
Q Consensus       143 ----------------------~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~~~  183 (502)
                                            .....+..+.++|.+||. +|.+||+++|+|.||||+.....
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~~  322 (335)
T PTZ00024        259 PQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLP  322 (335)
T ss_pred             cchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCCC
Confidence                                  011236778999999999 99999999999999999865443


No 265
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.94  E-value=5.9e-26  Score=224.05  Aligned_cols=170  Identities=20%  Similarity=0.360  Sum_probs=136.2

Q ss_pred             CCCCCcHHHHHHhCC-------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCC--CCcEEEEecCCce
Q 010730            1 MFTSGTLREYRKKYT-------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGH--LGQIKIGDLGLAA   71 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~-------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~--~g~vKL~DFGlA~   71 (502)
                      |+.||+|.+++.+.+       .+++..+..++.||+.||+|||+++  ++||||||+||+++.+  ...+||+|||+++
T Consensus        90 ~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~  167 (277)
T cd05036          90 LMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH--FIHRDIAARNCLLTCKGPGRVAKIADFGMAR  167 (277)
T ss_pred             cCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccchheEEEeccCCCcceEeccCcccc
Confidence            567999999997754       4899999999999999999999998  9999999999999864  2358999999998


Q ss_pred             eccCCCC---cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCccccc
Q 010730           72 ILRGSQQ---AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRI  146 (502)
Q Consensus        72 ~~~~~~~---~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~  146 (502)
                      .+.....   .....+++.|+|||++. ..++.++|||||||++|+|++ |..||.+ .....+.+.+..+..+ .++..
T Consensus       168 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~-~~~~~~~~~~~~~~~~-~~~~~  245 (277)
T cd05036         168 DIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPG-RTNQEVMEFVTGGGRL-DPPKG  245 (277)
T ss_pred             ccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHcCCcC-CCCCC
Confidence            6632211   11223456899999875 559999999999999999997 9999976 3445556665544332 33444


Q ss_pred             ccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          147 QDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       147 ~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .+..+.+++.+||. +|.+||++.++|+|
T Consensus       246 ~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         246 CPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            57889999999998 99999999999987


No 266
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.94  E-value=5.7e-26  Score=222.52  Aligned_cols=170  Identities=23%  Similarity=0.346  Sum_probs=132.9

Q ss_pred             CCCCCcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccC
Q 010730            1 MFTSGTLREYRKKYT-----RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG   75 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~-----~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~   75 (502)
                      |+.+|+|.+++.+..     ..++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||++.....
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~-~~~kl~dfg~~~~~~~  152 (269)
T cd05042          76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD--FIHSDLALRNCQLTAD-LSVKIGDYGLALEQYP  152 (269)
T ss_pred             eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC--EecccccHhheEecCC-CcEEEecccccccccc
Confidence            578999999997653     2467788999999999999999998  9999999999999987 7999999999865322


Q ss_pred             CC---CcccccCCCcccCccccc--------cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCC---
Q 010730           76 SQ---QAHSVIGTPEFMAPELYE--------EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLP---  140 (502)
Q Consensus        76 ~~---~~~s~vGTp~Y~APEvl~--------~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p---  140 (502)
                      ..   ......+++.|+|||++.        ..++.++|||||||++|+|++ |..||....+...+...+..+..+   
T Consensus       153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  232 (269)
T cd05042         153 EDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPK  232 (269)
T ss_pred             chheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCC
Confidence            11   112345677899999864        236789999999999999999 888997755544444444444322   


Q ss_pred             CcccccccHHHHHHHHHhhhCcCCCCCHHHHhc
Q 010730          141 GAFHRIQDAEARRFVGKCLENVSKRLPAKELLL  173 (502)
Q Consensus       141 ~~~~~~~s~~l~~LI~kcL~dP~kRpSa~ELL~  173 (502)
                      ..+....+..+++++..|+.+|.+||++++++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~dp~~Rpt~~~v~~  265 (269)
T cd05042         233 PQLDLKYSDRWYEVMQFCWLDPETRPTAEEVHE  265 (269)
T ss_pred             CcccccCCHHHHHHHHHHhcCcccccCHHHHHH
Confidence            223334577889999999999999999999986


No 267
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.94  E-value=7.5e-26  Score=220.12  Aligned_cols=168  Identities=20%  Similarity=0.406  Sum_probs=138.2

Q ss_pred             CCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++.. .+.+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++.........
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~~-~~~kl~d~g~~~~~~~~~~~  156 (256)
T cd05114          80 FMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS--FIHRDLAARNCLVSST-GVVKVSDFGMTRYVLDDEYT  156 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcceEEEcCC-CeEEECCCCCccccCCCcee
Confidence            5789999999975 356899999999999999999999998  9999999999999876 78999999998765332211


Q ss_pred             --ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHH
Q 010730           80 --HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFV  155 (502)
Q Consensus        80 --~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI  155 (502)
                        ....++..|+|||++. ..++.++||||||+++|+|++ |..||.. .+..+++..+..+..+ ..+...+..+.+++
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~-~~~~~~~~~i~~~~~~-~~~~~~~~~~~~li  234 (256)
T cd05114         157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEK-KSNYEVVEMISRGFRL-YRPKLASMTVYEVM  234 (256)
T ss_pred             ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHCCCCC-CCCCCCCHHHHHHH
Confidence              2234567899999876 458899999999999999999 9999976 4556667777766543 23344577899999


Q ss_pred             HHhhh-CcCCCCCHHHHhc
Q 010730          156 GKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL~  173 (502)
                      .+||. +|.+||+++++++
T Consensus       235 ~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         235 YSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             HHHccCCcccCcCHHHHHH
Confidence            99998 9999999999986


No 268
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.94  E-value=4.2e-26  Score=233.59  Aligned_cols=171  Identities=30%  Similarity=0.427  Sum_probs=137.8

Q ss_pred             CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccc
Q 010730            3 TSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSV   82 (502)
Q Consensus         3 tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~   82 (502)
                      .|++|.+++.. .++++..++.++.||+.||.|||+.+  |+||||||+||+++.+ +.+||+|||++......  ....
T Consensus       102 ~~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nill~~~-~~~kL~dfg~~~~~~~~--~~~~  175 (343)
T cd07851         102 MGADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAG--IIHRDLKPSNIAVNED-CELKILDFGLARHTDDE--MTGY  175 (343)
T ss_pred             CCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCC-CCEEEcccccccccccc--ccCC
Confidence            47899999976 57999999999999999999999998  9999999999999876 79999999999765432  3456


Q ss_pred             cCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCC-CCC------------------
Q 010730           83 IGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGK-LPG------------------  141 (502)
Q Consensus        83 vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~-~p~------------------  141 (502)
                      .+++.|+|||++.+  .++.++|||||||++|+|++|..||.+... ...+..+.... .+.                  
T Consensus       176 ~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (343)
T cd07851         176 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH-IDQLKRIMNLVGTPDEELLQKISSESARNYIQS  254 (343)
T ss_pred             cccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCCHHHHhhccchhHHHHHHh
Confidence            78999999998754  478899999999999999999999976433 33333332210 000                  


Q ss_pred             ----------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          142 ----------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       142 ----------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                                ......+..+.+||.+||. +|.+|||+.+||.||||+..
T Consensus       255 ~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~  304 (343)
T cd07851         255 LPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEY  304 (343)
T ss_pred             ccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCcccc
Confidence                      0011237789999999998 99999999999999999754


No 269
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.94  E-value=4e-26  Score=229.37  Aligned_cols=169  Identities=24%  Similarity=0.351  Sum_probs=135.5

Q ss_pred             CCCCCcHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEE
Q 010730            1 MFTSGTLREYRKKYT----------------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKI   64 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~----------------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL   64 (502)
                      |+.+|+|.+++.+.+                .+++..++.++.||+.||+|||+++  |+||||||+|||++.+ +.+||
T Consensus        89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dlkp~Nili~~~-~~~kl  165 (303)
T cd05088          89 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGEN-YVAKI  165 (303)
T ss_pred             eCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEecCC-CcEEe
Confidence            567999999997543                5789999999999999999999998  9999999999999876 78999


Q ss_pred             EecCCceeccCCCCcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCc
Q 010730           65 GDLGLAAILRGSQQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGA  142 (502)
Q Consensus        65 ~DFGlA~~~~~~~~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~  142 (502)
                      +|||++.............+++.|+|||++.+ .++.++|||||||++|+|+| |..||.. .+..++++.+..+..+ .
T Consensus       166 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~-~~~~~~~~~~~~~~~~-~  243 (303)
T cd05088         166 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG-MTCAELYEKLPQGYRL-E  243 (303)
T ss_pred             CccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCccc-CChHHHHHHHhcCCcC-C
Confidence            99999864322111122234678999998754 47899999999999999998 9999975 4455666666554322 2


Q ss_pred             ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          143 FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       143 ~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .+...+..+.++|.+||. +|.+||++.++|..
T Consensus       244 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         244 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            233356789999999998 99999999999986


No 270
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis.  Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.94  E-value=5.5e-26  Score=221.67  Aligned_cols=171  Identities=27%  Similarity=0.432  Sum_probs=140.6

Q ss_pred             CCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC
Q 010730            1 MFTSGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k----~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~   76 (502)
                      |+.+|+|.+++..    ...+++..+..++.||+.||.|||+++  |+|+||||+||+++.+ +.++|+|||++......
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~nil~~~~-~~~~l~d~g~~~~~~~~  159 (267)
T cd08228          83 LADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR--VMHRDIKPANVFITAT-GVVKLGDLGLGRFFSSK  159 (267)
T ss_pred             ecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCCHHHEEEcCC-CCEEECccccceeccch
Confidence            5678999998853    345899999999999999999999998  9999999999999876 78999999998876432


Q ss_pred             C-CcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCC-CChHHHHHHhhcCCCCCcccccccHHHHH
Q 010730           77 Q-QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSEC-SNPAQIYKKVTSGKLPGAFHRIQDAEARR  153 (502)
Q Consensus        77 ~-~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~-~~~~ql~~kI~~g~~p~~~~~~~s~~l~~  153 (502)
                      . ......|++.|+|||.+. ..++.++|+||||+++|+|++|..||... .+...+.+.+..+..+.......+..+++
T Consensus       160 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd08228         160 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRE  239 (267)
T ss_pred             hHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHH
Confidence            2 123457899999999875 45888999999999999999999998653 23456666666655554444455788999


Q ss_pred             HHHHhhh-CcCCCCCHHHHhcC
Q 010730          154 FVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      +|.+||. +|.+||++.++++.
T Consensus       240 li~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         240 LVSMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             HHHHHCCCCcccCcCHHHHHHH
Confidence            9999998 99999999999974


No 271
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.94  E-value=7.5e-26  Score=224.18  Aligned_cols=177  Identities=29%  Similarity=0.456  Sum_probs=143.0

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC--
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ--   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~--   78 (502)
                      |+.+|+|.+++.+.+.+++..++.++.||+.+|.|||..+  ++||||||.||+++.+ +.++|+|||++..+.....  
T Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--~~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~~  162 (288)
T cd05583          86 YVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLG--IIYRDIKLENILLDSE-GHVVLTDFGLSKEFLAEEEER  162 (288)
T ss_pred             cCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCC-CCEEEEECccccccccccccc
Confidence            5678999999988888999999999999999999999988  9999999999999876 7899999999876543221  


Q ss_pred             cccccCCCcccCccccccC---CCCcccchhHHHHHHHHhhccCCCCCCC---ChHHHHHHhhcCCCCCcccccccHHHH
Q 010730           79 AHSVIGTPEFMAPELYEED---YNELVDIYSFGMCVLEMLTSEYPYSECS---NPAQIYKKVTSGKLPGAFHRIQDAEAR  152 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~~---ys~~~DIWSLGviLyeLLTG~~Pf~~~~---~~~ql~~kI~~g~~p~~~~~~~s~~l~  152 (502)
                      .....|++.|+|||.+.+.   .+.++||||||+++|+|++|..||....   ....+.+.+.....  ..+...+..++
T Consensus       163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~  240 (288)
T cd05583         163 AYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKP--PFPKTMSAEAR  240 (288)
T ss_pred             cccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCC--CCCcccCHHHH
Confidence            2235689999999987543   6789999999999999999999995421   22334444443332  23344578899


Q ss_pred             HHHHHhhh-CcCCCCC---HHHHhcCCCCcCCCC
Q 010730          153 RFVGKCLE-NVSKRLP---AKELLLDPFLASDAG  182 (502)
Q Consensus       153 ~LI~kcL~-dP~kRpS---a~ELL~hPff~~~~~  182 (502)
                      ++|.+||. +|.+|||   +.++|+||||+.-.+
T Consensus       241 ~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~  274 (288)
T cd05583         241 DFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW  274 (288)
T ss_pred             HHHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence            99999998 9999998   678899999986544


No 272
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.94  E-value=8.6e-26  Score=219.11  Aligned_cols=169  Identities=25%  Similarity=0.381  Sum_probs=137.7

Q ss_pred             CCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKYT--RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~--~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++.+..  .+++..++.++.||+.||+|||+.+  ++||||||+||+++.+ +.+||+|||++..+.....
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~di~p~nil~~~~-~~~kl~dfg~~~~~~~~~~  152 (257)
T cd05040          76 LAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR--FIHRDLAARNILLASD-DKVKIGDFGLMRALPQNED  152 (257)
T ss_pred             ecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC--ccccccCcccEEEecC-CEEEecccccccccccccc
Confidence            467999999998754  6899999999999999999999998  9999999999999987 7999999999987643211


Q ss_pred             ----cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHH
Q 010730           79 ----AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEAR  152 (502)
Q Consensus        79 ----~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~  152 (502)
                          .....++..|+|||.+. ..++.++|||||||++|+|++ |..||.. .+..++.+.+.........+...+..+.
T Consensus       153 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (257)
T cd05040         153 HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAG-LSGSQILKKIDKEGERLERPEACPQDIY  231 (257)
T ss_pred             ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHhcCCcCCCCccCCHHHH
Confidence                12345778999999876 458999999999999999999 9999965 4555566555532222223334568899


Q ss_pred             HHHHHhhh-CcCCCCCHHHHhc
Q 010730          153 RFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       153 ~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      +++.+||. +|.+||++.+++.
T Consensus       232 ~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         232 NVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             HHHHHHCCCCcccCCCHHHHHH
Confidence            99999998 9999999999986


No 273
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.94  E-value=7.1e-26  Score=230.72  Aligned_cols=174  Identities=29%  Similarity=0.447  Sum_probs=133.8

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC----Cc
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ----QA   79 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~----~~   79 (502)
                      +++|.+++.. +.+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++.......    ..
T Consensus        91 ~~~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~--ivH~dlkp~Nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~  166 (336)
T cd07849          91 ETDLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTN-CDLKICDFGLARIADPEHDHTGFL  166 (336)
T ss_pred             ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECCC-CCEEECcccceeeccccccccCCc
Confidence            4688888754 56999999999999999999999998  9999999999999876 799999999997654321    12


Q ss_pred             ccccCCCcccCccccc--cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHH--------------HHHhhcCC-----
Q 010730           80 HSVIGTPEFMAPELYE--EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQI--------------YKKVTSGK-----  138 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~--~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql--------------~~kI~~g~-----  138 (502)
                      ...+||+.|+|||++.  ..++.++|||||||++|+|++|+.||.+......+              ++.+....     
T Consensus       167 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (336)
T cd07849         167 TEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYI  246 (336)
T ss_pred             CCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHH
Confidence            3457899999999764  35889999999999999999999999763322111              11111000     


Q ss_pred             --CC----Cc---ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          139 --LP----GA---FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       139 --~p----~~---~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                        .+    ..   .....+.++.++|.+||. +|.+|||+.|++.||||+...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         247 KSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             hhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence              00    00   011236779999999999 999999999999999997543


No 274
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.94  E-value=1.2e-25  Score=225.59  Aligned_cols=170  Identities=28%  Similarity=0.505  Sum_probs=137.8

Q ss_pred             CCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccc
Q 010730            4 SGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSV   82 (502)
Q Consensus         4 gGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~   82 (502)
                      .|+|.+++.. .+.+++..+..++.||+.||.|||+++  |+||||+|+||+++.+ +.+||+|||++.....   ....
T Consensus        98 ~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~--i~H~dl~p~nIl~~~~-~~~kL~dfg~~~~~~~---~~~~  171 (307)
T cd06607          98 LGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHE--RIHRDIKAGNILLTEP-GTVKLADFGSASLVSP---ANSF  171 (307)
T ss_pred             CCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEECCC-CCEEEeecCcceecCC---CCCc
Confidence            4678887764 457999999999999999999999998  9999999999999887 7999999999876532   2346


Q ss_pred             cCCCcccCccccc----cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           83 IGTPEFMAPELYE----EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        83 vGTp~Y~APEvl~----~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      .|++.|+|||++.    +.++.++||||||+++|+|++|..||........++ .+.....+.......+..++++|.+|
T Consensus       172 ~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~  250 (307)
T cd06607         172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HIAQNDSPTLSSNDWSDYFRNFVDSC  250 (307)
T ss_pred             cCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHH-HHhcCCCCCCCchhhCHHHHHHHHHH
Confidence            7899999999873    458889999999999999999999997643333333 33333333222333567899999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcCC
Q 010730          159 LE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      |. +|.+||++.+++.||||...
T Consensus       251 l~~~p~~Rp~~~~il~~~~~~~~  273 (307)
T cd06607         251 LQKIPQDRPSSEELLKHRFVLRE  273 (307)
T ss_pred             hcCChhhCcCHHHHhcChhhccc
Confidence            98 99999999999999999754


No 275
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.94  E-value=5.5e-26  Score=227.68  Aligned_cols=163  Identities=20%  Similarity=0.301  Sum_probs=130.3

Q ss_pred             CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-------
Q 010730            5 GTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-------   77 (502)
Q Consensus         5 GsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-------   77 (502)
                      +++.++++.....++..++.++.||+.||+|||+.+  |+||||||+|||++.+ +.+||+|||+++.+....       
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiHrDiKp~Nill~~~-~~~~l~DFGla~~~~~~~~~~~~~~  187 (294)
T PHA02882        111 ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHG--ISHGDIKPENIMVDGN-NRGYIIDYGIASHFIIHGKHIEYSK  187 (294)
T ss_pred             cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCC-CcEEEEEcCCceeeccCCccccccc
Confidence            466777776666789999999999999999999998  9999999999999876 789999999998653211       


Q ss_pred             -CcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHH--------HHHHhhcCCCCCcccccc
Q 010730           78 -QAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQ--------IYKKVTSGKLPGAFHRIQ  147 (502)
Q Consensus        78 -~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~q--------l~~kI~~g~~p~~~~~~~  147 (502)
                       ......||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+......        +++.+..++..   ....
T Consensus       188 ~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  264 (294)
T PHA02882        188 EQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIK---IKNA  264 (294)
T ss_pred             ccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhc---cCCC
Confidence             1223579999999998764 489999999999999999999999977533222        23444444332   1223


Q ss_pred             cHHHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          148 DAEARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       148 s~~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      +..+.+++..|+. +|.+||++.+|++
T Consensus       265 ~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        265 NKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             CHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            6789999999999 9999999999876


No 276
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.94  E-value=1.8e-26  Score=262.49  Aligned_cols=172  Identities=16%  Similarity=0.183  Sum_probs=129.8

Q ss_pred             CCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCC------------------CCcE
Q 010730            2 FTSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGH------------------LGQI   62 (502)
Q Consensus         2 ~tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~------------------~g~v   62 (502)
                      +.+++|.+++.+ ...+++..++.+++||+.||+|||++|  ||||||||+|||++..                  .+.+
T Consensus        61 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g--IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~  138 (793)
T PLN00181         61 CEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATT  138 (793)
T ss_pred             cCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCC--eeeccCCchhEEEcccCcEEEeeccccCcccccccCcc
Confidence            347899999975 456999999999999999999999998  9999999999999532                  2456


Q ss_pred             EEEecCCceeccCC-----------------CCcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCC
Q 010730           63 KIGDLGLAAILRGS-----------------QQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSEC  124 (502)
Q Consensus        63 KL~DFGlA~~~~~~-----------------~~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~  124 (502)
                      |++|||+++.....                 ......+||+.|||||++. ..|+.++|||||||+||||++|.+|+...
T Consensus       139 ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~  218 (793)
T PLN00181        139 KSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEK  218 (793)
T ss_pred             cccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhH
Confidence            77777776542110                 0011246899999999875 46999999999999999999999887532


Q ss_pred             CChHHHHHHhhcCCCCCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          125 SNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       125 ~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                         ......+....++... ....+.+..++.+||. +|.+||++.|+|+||||..
T Consensus       219 ---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~  270 (793)
T PLN00181        219 ---SRTMSSLRHRVLPPQI-LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINE  270 (793)
T ss_pred             ---HHHHHHHHHhhcChhh-hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence               2223333333333221 1124567789999998 9999999999999999975


No 277
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.94  E-value=8.1e-26  Score=223.72  Aligned_cols=168  Identities=22%  Similarity=0.380  Sum_probs=136.5

Q ss_pred             CCCCCcHHHHHHhCC---------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEE
Q 010730            1 MFTSGTLREYRKKYT---------------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIG   65 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~---------------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~   65 (502)
                      |+.+|+|.+++...+               .+++..+..++.||+.||+|||+++  |+||||||+|||++.+ +.+||+
T Consensus        88 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~nil~~~~-~~~kL~  164 (280)
T cd05092          88 YMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH--FVHRDLATRNCLVGQG-LVVKIG  164 (280)
T ss_pred             cCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC--eecccccHhhEEEcCC-CCEEEC
Confidence            578999999998753               4889999999999999999999998  9999999999999876 789999


Q ss_pred             ecCCceeccCCCC---cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCC
Q 010730           66 DLGLAAILRGSQQ---AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLP  140 (502)
Q Consensus        66 DFGlA~~~~~~~~---~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p  140 (502)
                      |||++........   .....+++.|+|||++. ..++.++|||||||++|+|++ |.+||... ........+..+..+
T Consensus       165 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~  243 (280)
T cd05092         165 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQL-SNTEAIECITQGREL  243 (280)
T ss_pred             CCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccC-CHHHHHHHHHcCccC
Confidence            9999976533221   12234578899999775 458999999999999999998 99999764 344455556555433


Q ss_pred             CcccccccHHHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          141 GAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       141 ~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                       ..+...++.++++|.+||. +|.+||++.+|+.
T Consensus       244 -~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         244 -ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             -CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence             2334557889999999998 9999999999875


No 278
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological 
Probab=99.93  E-value=7.8e-26  Score=221.79  Aligned_cols=169  Identities=24%  Similarity=0.398  Sum_probs=138.1

Q ss_pred             CCCCCcHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCc
Q 010730            1 MFTSGTLREYRKKYT----------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLA   70 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~----------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA   70 (502)
                      |+.+|+|.+++....          .+++..+..++.||+.||.|||+.+  |+||||||+||+++.+ +.+||+|||++
T Consensus        90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~di~p~nill~~~-~~~kl~dfg~~  166 (277)
T cd05032          90 LMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK--FVHRDLAARNCMVAED-LTVKIGDFGMT  166 (277)
T ss_pred             cCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccChheEEEcCC-CCEEECCcccc
Confidence            567899999997532          3678899999999999999999988  9999999999999987 79999999998


Q ss_pred             eeccCCC---CcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccc
Q 010730           71 AILRGSQ---QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHR  145 (502)
Q Consensus        71 ~~~~~~~---~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~  145 (502)
                      +.+....   ......++..|+|||++. +.++.++|||||||++|+|+| |..||.+ .+..++.+.+..+..+ ..+.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~  244 (277)
T cd05032         167 RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQG-LSNEEVLKFVIDGGHL-DLPE  244 (277)
T ss_pred             hhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCcc-CCHHHHHHHHhcCCCC-CCCC
Confidence            7654322   223445788999999775 458899999999999999998 9999976 4556666666655433 2334


Q ss_pred             cccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          146 IQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       146 ~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      ..+..+.++|.+||. +|.+|||+.+++..
T Consensus       245 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~  274 (277)
T cd05032         245 NCPDKLLELMRMCWQYNPKMRPTFLEIVSS  274 (277)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            457899999999998 99999999999863


No 279
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=99.93  E-value=7.6e-26  Score=224.13  Aligned_cols=171  Identities=23%  Similarity=0.409  Sum_probs=131.7

Q ss_pred             CCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cccc
Q 010730            4 SGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QAHS   81 (502)
Q Consensus         4 gGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~~s   81 (502)
                      +|+|.+++.+. ..+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++....... ....
T Consensus        86 ~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~  162 (291)
T cd07844          86 DTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR--VLHRDLKPQNLLISER-GELKLADFGLARAKSVPSKTYSN  162 (291)
T ss_pred             CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCHHHEEEcCC-CCEEECccccccccCCCCccccc
Confidence            36999999764 46899999999999999999999998  9999999999999887 799999999986543211 1223


Q ss_pred             ccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc---CCCCC---------------
Q 010730           82 VIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS---GKLPG---------------  141 (502)
Q Consensus        82 ~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~---g~~p~---------------  141 (502)
                      ..+++.|+|||++.+  .++.++||||+|+++|+|++|..||.+.....+..+.+..   ...+.               
T Consensus       163 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (291)
T cd07844         163 EVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYS  242 (291)
T ss_pred             cccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccc
Confidence            457899999998753  4788999999999999999999999765433322222110   00000               


Q ss_pred             -------cc---ccccc--HHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          142 -------AF---HRIQD--AEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       142 -------~~---~~~~s--~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                             ..   ....+  ..+.++|.+||. +|.+|||+.++|.||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         243 FPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             ccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                   00   00122  678899999999 99999999999999998


No 280
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.93  E-value=9e-26  Score=219.58  Aligned_cols=169  Identities=20%  Similarity=0.353  Sum_probs=135.7

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC--
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ--   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~--   77 (502)
                      |+.+|+|.+++.+. ..+++..+..++.||+.||.|||+.+  |+||||||+|||++.+ +.+||+|||++..+....  
T Consensus        78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlk~~nili~~~-~~~kl~dfg~~~~~~~~~~~  154 (262)
T cd05058          78 YMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK--FVHRDLAARNCMLDES-FTVKVADFGLARDIYDKEYY  154 (262)
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcCC-CcEEECCccccccccCCcce
Confidence            57889999999764 45788888999999999999999988  9999999999999876 789999999987553211  


Q ss_pred             ---CcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhc-cCCCCCCCChHHHHHHhhcCCCCCcccccccHHHH
Q 010730           78 ---QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTS-EYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEAR  152 (502)
Q Consensus        78 ---~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG-~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~  152 (502)
                         ......+++.|+|||.+. ..++.++|||||||++|+|++| .+||.. .+...+.+.+..+..+ ..+...+..+.
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~  232 (262)
T cd05058         155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-VDSFDITVYLLQGRRL-LQPEYCPDPLY  232 (262)
T ss_pred             eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHhcCCCC-CCCCcCCHHHH
Confidence               112344678899999775 5588999999999999999995 566654 5566666666665443 23334567899


Q ss_pred             HHHHHhhh-CcCCCCCHHHHhcC
Q 010730          153 RFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       153 ~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      +++.+||. +|.+||++.+++..
T Consensus       233 ~li~~cl~~~p~~Rp~~~~il~~  255 (262)
T cd05058         233 EVMLSCWHPKPEMRPTFSELVSR  255 (262)
T ss_pred             HHHHHHcCCChhhCCCHHHHHHH
Confidence            99999998 99999999999874


No 281
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.93  E-value=8.4e-26  Score=231.27  Aligned_cols=172  Identities=27%  Similarity=0.434  Sum_probs=133.6

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC----c
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ----A   79 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~----~   79 (502)
                      +++|.+++.. ..+++..++.++.||+.||.|||+++  |+||||||+||+++...+.+||+|||++..+.....    .
T Consensus        99 ~~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g--ivH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~  175 (342)
T cd07854          99 ETDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYL  175 (342)
T ss_pred             cccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcCCCceEEECCcccceecCCcccccccc
Confidence            4689888864 46999999999999999999999998  999999999999986556799999999976532211    1


Q ss_pred             ccccCCCcccCccccc--cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcC--------------------
Q 010730           80 HSVIGTPEFMAPELYE--EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSG--------------------  137 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~--~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g--------------------  137 (502)
                      ....|++.|+|||++.  ..++.++|||||||++|+|++|..||........ ...+...                    
T Consensus       176 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (342)
T cd07854         176 SEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ-MQLILESVPVVREEDRNELLNVIPSFV  254 (342)
T ss_pred             ccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCChHHhhhhhhhhhhhh
Confidence            2346889999999764  3478899999999999999999999976433222 2221110                    


Q ss_pred             ----CCC-C---cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          138 ----KLP-G---AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       138 ----~~p-~---~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                          ..+ .   .+....+.++++||.+||. +|.+|||+.|+|.||||+.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~  305 (342)
T cd07854         255 RNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC  305 (342)
T ss_pred             hhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence                000 0   0111346789999999999 9999999999999999974


No 282
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.93  E-value=3.1e-26  Score=232.68  Aligned_cols=177  Identities=25%  Similarity=0.422  Sum_probs=134.5

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-C
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-Q   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~   77 (502)
                      |+.+|+|.+++.+.  ..+++..++.++.||+.||+|||+.+  |+||||||+||+++.+ +.+|++||+.+...... .
T Consensus        80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivHrDlkp~Nill~~~-~~~~~~~~~~~~~~~~~~~  156 (328)
T cd08226          80 FMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG--YIHRNIKASHILISGD-GLVSLSGLSHLYSLVRNGQ  156 (328)
T ss_pred             cccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEeCC-CcEEEechHHHhhhhccCc
Confidence            46789999999875  35899999999999999999999988  9999999999999876 78999999865332111 1


Q ss_pred             Cc-------ccccCCCcccCcccccc---CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCC-------
Q 010730           78 QA-------HSVIGTPEFMAPELYEE---DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLP-------  140 (502)
Q Consensus        78 ~~-------~s~vGTp~Y~APEvl~~---~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p-------  140 (502)
                      ..       ....++..|+|||++.+   .++.++|||||||++|+|++|..||........+...+......       
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (328)
T cd08226         157 KAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTF  236 (328)
T ss_pred             cccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCcccccc
Confidence            10       11234567999998864   37899999999999999999999997754444433332211100       


Q ss_pred             -------------------------------------CcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          141 -------------------------------------GAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       141 -------------------------------------~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                                                           .......+..+.+||.+||. +|.+|||+.|+|+||||...
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~  314 (328)
T cd08226         237 PCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV  314 (328)
T ss_pred             chhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence                                                 00111235678999999998 99999999999999999654


No 283
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.93  E-value=1e-25  Score=219.49  Aligned_cols=169  Identities=21%  Similarity=0.409  Sum_probs=137.6

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.||+|.+++... ..+++..+..++.||+.||.|||+.+  |+||||||+||+++.+ +.+||+|||+++........
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~ni~i~~~-~~~kl~dfg~~~~~~~~~~~  156 (256)
T cd05059          80 YMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG--FIHRDLAARNCLVGED-NVVKVSDFGLARYVLDDQYT  156 (256)
T ss_pred             cCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--cccccccHhhEEECCC-CcEEECCcccceeccccccc
Confidence            56799999999764 46899999999999999999999998  9999999999999876 79999999998765432211


Q ss_pred             --ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHH
Q 010730           80 --HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFV  155 (502)
Q Consensus        80 --~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI  155 (502)
                        ....++..|+|||++. ..++.++||||||+++|+|++ |..||.. ....++...+..+..+ ..+...+.++.+++
T Consensus       157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li  234 (256)
T cd05059         157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYER-FSNSEVVESVSAGYRL-YRPKLAPTEVYTIM  234 (256)
T ss_pred             ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCC-CCHHHHHHHHHcCCcC-CCCCCCCHHHHHHH
Confidence              1112345799999875 458899999999999999999 8999976 4455666666655332 34455688999999


Q ss_pred             HHhhh-CcCCCCCHHHHhcC
Q 010730          156 GKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .+||. +|.+|||+.|+++.
T Consensus       235 ~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         235 YSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             HHHhcCChhhCcCHHHHHHH
Confidence            99998 99999999999874


No 284
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.93  E-value=1.2e-25  Score=220.11  Aligned_cols=169  Identities=20%  Similarity=0.358  Sum_probs=137.9

Q ss_pred             CCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++.. ...+++..++.++.||+.||.|||+++  ++||||||+||+++.+ +.+||+|||++.........
T Consensus        75 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~~-~~~kl~dfg~~~~~~~~~~~  151 (257)
T cd05115          75 MASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN--FVHRDLAARNVLLVNQ-HYAKISDFGLSKALGADDSY  151 (257)
T ss_pred             eCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC--eeecccchheEEEcCC-CcEEeccCCccccccCCccc
Confidence            5689999999975 457999999999999999999999998  9999999999999876 78999999999765332211


Q ss_pred             ----ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHH
Q 010730           80 ----HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARR  153 (502)
Q Consensus        80 ----~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~  153 (502)
                          ....+++.|+|||++. ..++.++|||||||++|+|++ |..||.+. ....+...+..+..+ ..+...+.++.+
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~l~~  229 (257)
T cd05115         152 YKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKM-KGPEVMSFIEQGKRL-DCPAECPPEMYA  229 (257)
T ss_pred             eeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcC-CHHHHHHHHHCCCCC-CCCCCCCHHHHH
Confidence                1122357899999875 458889999999999999996 99999774 445566666666543 344556789999


Q ss_pred             HHHHhhh-CcCCCCCHHHHhcC
Q 010730          154 FVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      +|.+||. +|.+||++.++++.
T Consensus       230 li~~c~~~~~~~Rp~~~~i~~~  251 (257)
T cd05115         230 LMKDCWIYKWEDRPNFAKVEER  251 (257)
T ss_pred             HHHHHcCCChhhCcCHHHHHHH
Confidence            9999999 99999999998763


No 285
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=99.93  E-value=1.1e-25  Score=219.88  Aligned_cols=169  Identities=21%  Similarity=0.412  Sum_probs=138.9

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++... ..+++..++.++.||+.||.|||+.+  |+|+||||+||+++.+ +.+||+|||.++........
T Consensus        80 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~nili~~~-~~~kl~d~g~~~~~~~~~~~  156 (256)
T cd05113          80 YMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ--FIHRDLAARNCLVDDQ-GCVKVSDFGLSRYVLDDEYT  156 (256)
T ss_pred             cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcCC-CCEEECCCccceecCCCcee
Confidence            56789999999764 46899999999999999999999998  9999999999999876 78999999998765433221


Q ss_pred             c--cccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHH
Q 010730           80 H--SVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFV  155 (502)
Q Consensus        80 ~--s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI  155 (502)
                      .  ...++..|+|||++. ..++.++|||||||++|+|++ |..||.. .+...+...+..+..+ ......+..+++++
T Consensus       157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li  234 (256)
T cd05113         157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYER-FNNSETVEKVSQGLRL-YRPHLASEKVYAIM  234 (256)
T ss_pred             ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCc-CCHHHHHHHHhcCCCC-CCCCCCCHHHHHHH
Confidence            1  123567899999886 458899999999999999999 9999976 4455666677665443 23444578999999


Q ss_pred             HHhhh-CcCCCCCHHHHhcC
Q 010730          156 GKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .+||. +|.+||++.+|+.+
T Consensus       235 ~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         235 YSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             HHHcCCCcccCCCHHHHHHh
Confidence            99998 99999999999874


No 286
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.93  E-value=1.4e-25  Score=218.42  Aligned_cols=171  Identities=29%  Similarity=0.505  Sum_probs=141.8

Q ss_pred             CCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC
Q 010730            1 MFTSGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k----~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~   76 (502)
                      |+.+++|.+++.+    ...+++..++.++.||+.||.|||+.+  ++|+||||+||+++.  +.+||+|||++......
T Consensus        83 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~h~~l~~~nili~~--~~~~l~d~g~~~~~~~~  158 (260)
T cd08222          83 YCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR--ILHRDLKAKNIFLKN--NLLKIGDFGVSRLLMGS  158 (260)
T ss_pred             eCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC--ccccCCChhheEeec--CCEeecccCceeecCCC
Confidence            5788999998864    356999999999999999999999998  999999999999975  46999999999776433


Q ss_pred             CC-cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           77 QQ-AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        77 ~~-~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      .. .....|++.|+|||.+.+ .++.++|+||||+++|+|++|..||.. .....+...+..+..+. ++...+.++.++
T Consensus       159 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l  236 (260)
T cd08222         159 CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEG-QNFLSVVLRIVEGPTPS-LPETYSRQLNSI  236 (260)
T ss_pred             cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC-ccHHHHHHHHHcCCCCC-CcchhcHHHHHH
Confidence            22 234568999999997753 478899999999999999999999965 44455556665555443 344567899999


Q ss_pred             HHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          155 VGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      |.+||. +|.+||++.|+++||||
T Consensus       237 i~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         237 MQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HHHHhcCChhhCcCHHHHhhCCCC
Confidence            999998 99999999999999997


No 287
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.93  E-value=1.5e-25  Score=217.91  Aligned_cols=170  Identities=28%  Similarity=0.493  Sum_probs=140.1

Q ss_pred             CCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC
Q 010730            1 MFTSGTLREYRKKY----TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k~----~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~   76 (502)
                      |+.+|+|.+++.+.    ..+++..++.|+.||+.||.|||+.+  |+||||||+||+++.+ +.++|+|||++..+...
T Consensus        83 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~nil~~~~-~~~~l~d~~~~~~~~~~  159 (267)
T cd08224          83 LADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR--IMHRDIKPANVFITAT-GVVKLGDLGLGRFFSSK  159 (267)
T ss_pred             cCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC--EecCCcChhhEEECCC-CcEEEeccceeeeccCC
Confidence            57899999999652    45899999999999999999999998  9999999999999876 78999999998765432


Q ss_pred             C-CcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCC-CChHHHHHHhhcCCCCCcccccccHHHHH
Q 010730           77 Q-QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSEC-SNPAQIYKKVTSGKLPGAFHRIQDAEARR  153 (502)
Q Consensus        77 ~-~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~-~~~~ql~~kI~~g~~p~~~~~~~s~~l~~  153 (502)
                      . ......|++.|+|||.+. ..++.++|||||||++|+|++|..||... .+..++.+.+..+..+.......+..+++
T Consensus       160 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd08224         160 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRD  239 (267)
T ss_pred             CcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHH
Confidence            2 233457899999999775 45889999999999999999999999653 33445666666665554333356778999


Q ss_pred             HHHHhhh-CcCCCCCHHHHhc
Q 010730          154 FVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      +|.+||. +|.+||++.+|++
T Consensus       240 ~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         240 LVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HHHHHcCCCcccCCCHHHHHH
Confidence            9999998 9999999999886


No 288
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.93  E-value=1e-25  Score=226.50  Aligned_cols=170  Identities=23%  Similarity=0.369  Sum_probs=138.4

Q ss_pred             CCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKYT--RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~--~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++....  .+++..+..++.||+.||+|||+++  |+|+||||+||+++.+ +.+||+|||+++.+.....
T Consensus       120 ~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~~-~~~~l~dfg~~~~~~~~~~  196 (302)
T cd05055         120 YCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNVLLTHG-KIVKICDFGLARDIMNDSN  196 (302)
T ss_pred             cCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eehhhhccceEEEcCC-CeEEECCCcccccccCCCc
Confidence            578999999997643  3899999999999999999999998  9999999999999876 6899999999976543221


Q ss_pred             ---cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHH
Q 010730           79 ---AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARR  153 (502)
Q Consensus        79 ---~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~  153 (502)
                         .....+++.|+|||++. ..++.++|||||||++|+|++ |..||........+++.+..+..+ ..+...+..+++
T Consensus       197 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  275 (302)
T cd05055         197 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRM-AQPEHAPAEIYD  275 (302)
T ss_pred             eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcC-CCCCCCCHHHHH
Confidence               12345678899999775 458899999999999999998 999998755555555655555432 233445789999


Q ss_pred             HHHHhhh-CcCCCCCHHHHhcC
Q 010730          154 FVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      ++.+||. +|.+||++.|++..
T Consensus       276 li~~cl~~~p~~Rpt~~ell~~  297 (302)
T cd05055         276 IMKTCWDADPLKRPTFKQIVQL  297 (302)
T ss_pred             HHHHHcCCCchhCcCHHHHHHH
Confidence            9999998 99999999999863


No 289
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.93  E-value=1.3e-25  Score=218.81  Aligned_cols=168  Identities=23%  Similarity=0.387  Sum_probs=136.5

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++.+.  ..+++..+..++.||+.||+|||+.+  ++||||||+||+++.+ +.+||+|||++........
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nili~~~-~~~~l~dfg~~~~~~~~~~  158 (261)
T cd05072          82 YMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSES-LMCKIADFGLARVIEDNEY  158 (261)
T ss_pred             cCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEecCC-CcEEECCCccceecCCCce
Confidence            56899999999763  56889999999999999999999988  9999999999999876 7899999999987643221


Q ss_pred             --cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 --AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 --~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                        .....++..|+|||++. +.++.++|||||||++|+|+| |..||.. .....+...+..+... ......+.++.++
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  236 (261)
T cd05072         159 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPG-MSNSDVMSALQRGYRM-PRMENCPDELYDI  236 (261)
T ss_pred             eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCC-CCHHHHHHHHHcCCCC-CCCCCCCHHHHHH
Confidence              12234677899999875 458889999999999999998 9999976 4455556666555332 2223457789999


Q ss_pred             HHHhhh-CcCCCCCHHHHhc
Q 010730          155 VGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~  173 (502)
                      |.+||. +|.+||++++++.
T Consensus       237 i~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         237 MKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             HHHHccCCcccCcCHHHHHH
Confidence            999998 9999999999875


No 290
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.93  E-value=1.6e-25  Score=211.34  Aligned_cols=174  Identities=35%  Similarity=0.584  Sum_probs=149.7

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.+++|.+++.....++...+..++.+|+.+|.|||..+  |+|+||+|.||+++.+ +.++|+|||.+..........
T Consensus        68 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~i~~~ni~~~~~-~~~~l~d~~~~~~~~~~~~~~  144 (244)
T smart00220       68 YCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNG--IIHRDLKPENILLDED-GHVKLADFGLARQLDPGGLLT  144 (244)
T ss_pred             CCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcC--eecCCcCHHHeEECCC-CcEEEccccceeeeccccccc
Confidence            4567799999988777999999999999999999999998  9999999999999987 799999999998776544455


Q ss_pred             cccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCccccc-ccHHHHHHHHHh
Q 010730           81 SVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRI-QDAEARRFVGKC  158 (502)
Q Consensus        81 s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~-~s~~l~~LI~kc  158 (502)
                      ...+++.|++||++. ..++.++||||||+++++|++|..||....+...+.+.+..+..+...... .+..+.+++.+|
T Consensus       145 ~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  224 (244)
T smart00220      145 TFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKL  224 (244)
T ss_pred             cccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHH
Confidence            677899999999875 558889999999999999999999997756777777777766554332221 567899999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCC
Q 010730          159 LE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff  177 (502)
                      |. +|.+||++.++++||||
T Consensus       225 l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      225 LVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             ccCCchhccCHHHHhhCCCC
Confidence            98 99999999999999997


No 291
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=99.93  E-value=6e-26  Score=226.74  Aligned_cols=171  Identities=33%  Similarity=0.493  Sum_probs=130.3

Q ss_pred             CCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeC----CCCcEEEEecCCceecc
Q 010730            4 SGTLREYRKKY-----TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNG----HLGQIKIGDLGLAAILR   74 (502)
Q Consensus         4 gGsL~~yi~k~-----~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~----~~g~vKL~DFGlA~~~~   74 (502)
                      +++|.+++...     ..+++..++.++.||+.||.|||+.+  |+||||||+||+++.    + +.+||+|||++..+.
T Consensus        87 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~h~dlkp~Nil~~~~~~~~-~~~kl~Dfg~~~~~~  163 (316)
T cd07842          87 EHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW--VLHRDLKPANILVMGEGPER-GVVKIGDLGLARLFN  163 (316)
T ss_pred             CcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEEcCCCCcc-ceEEECCCccccccC
Confidence            46787777532     36899999999999999999999998  999999999999987    5 789999999998654


Q ss_pred             CCC----CcccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChH---------H---HHHHh--
Q 010730           75 GSQ----QAHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPA---------Q---IYKKV--  134 (502)
Q Consensus        75 ~~~----~~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~---------q---l~~kI--  134 (502)
                      ...    .....++|+.|+|||++.+  .++.++|||||||++|+|++|.+||.+.....         .   +...+  
T Consensus       164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  243 (316)
T cd07842         164 APLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGT  243 (316)
T ss_pred             CCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCC
Confidence            322    1234578999999997754  47899999999999999999999996532211         0   00000  


Q ss_pred             ----------------------hcCCCC-----Cccc--ccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          135 ----------------------TSGKLP-----GAFH--RIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       135 ----------------------~~g~~p-----~~~~--~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                                            .....+     ....  ...+..+.++|.+||. +|.+|||+.|++.||||
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         244 PTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             CchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence                                  000000     0000  1345688999999999 99999999999999998


No 292
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.93  E-value=1.3e-25  Score=225.07  Aligned_cols=176  Identities=31%  Similarity=0.547  Sum_probs=141.2

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~   79 (502)
                      |+.+++|.+++.. +++++..++.++.||+.+|+|||+++  |+|+||||+||+++.+ +.++|+|||++..+.... ..
T Consensus        98 ~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~g--ivH~dl~p~Nilv~~~-~~~~l~dfg~~~~~~~~~~~~  173 (292)
T cd06657          98 FLEGGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQG--VIHRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRR  173 (292)
T ss_pred             cCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEEcccccceecccccccc
Confidence            5789999998754 56899999999999999999999998  9999999999999876 789999999987654322 22


Q ss_pred             ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCC-cccccccHHHHHHHHH
Q 010730           80 HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPG-AFHRIQDAEARRFVGK  157 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~-~~~~~~s~~l~~LI~k  157 (502)
                      ....|++.|+|||++. ..++.++|+||+||++|+|++|..||.. ....+....+..+..+. ......+..+.++|.+
T Consensus       174 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  252 (292)
T cd06657         174 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDR  252 (292)
T ss_pred             cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHH
Confidence            3457899999999875 4578899999999999999999999976 33344444443332211 1122357789999999


Q ss_pred             hhh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          158 CLE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       158 cL~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                      ||. +|.+||++.++|.||||....
T Consensus       253 ~l~~~P~~R~~~~~ll~~~~~~~~~  277 (292)
T cd06657         253 LLVRDPAQRATAAELLKHPFLAKAG  277 (292)
T ss_pred             HHhCCcccCcCHHHHhcChHHhccC
Confidence            998 999999999999999997543


No 293
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.93  E-value=1.2e-25  Score=217.56  Aligned_cols=165  Identities=21%  Similarity=0.313  Sum_probs=131.0

Q ss_pred             CCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCC------CcEEEEecCCceec
Q 010730            1 MFTSGTLREYRKKYT-RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHL------GQIKIGDLGLAAIL   73 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~-~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~------g~vKL~DFGlA~~~   73 (502)
                      |+.+|+|.+++.+.+ .++...+..++.||+.||+|||+++  |+||||||+||+++...      ..+||+|||++...
T Consensus        81 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~  158 (259)
T cd05037          81 YVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK--LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV  158 (259)
T ss_pred             cCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC--eecccCccceEEEecCccccCCceeEEeCCCCccccc
Confidence            578999999998766 7999999999999999999999988  99999999999998652      16999999998765


Q ss_pred             cCCCCcccccCCCcccCcccccc---CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccH
Q 010730           74 RGSQQAHSVIGTPEFMAPELYEE---DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDA  149 (502)
Q Consensus        74 ~~~~~~~s~vGTp~Y~APEvl~~---~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~  149 (502)
                      ..   .....++..|+|||++.+   .++.++|||||||++|+|++ |..||.... ............   ..+.....
T Consensus       159 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~-~~~~~~~~~~~~---~~~~~~~~  231 (259)
T cd05037         159 LS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS-SSEKERFYQDQH---RLPMPDCA  231 (259)
T ss_pred             cc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC-chhHHHHHhcCC---CCCCCCch
Confidence            43   223567788999998864   48889999999999999999 688886643 222222222111   11122237


Q ss_pred             HHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          150 EARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       150 ~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .+.++|.+||. +|.+||++.++++.
T Consensus       232 ~~~~li~~~l~~~p~~Rpt~~~il~~  257 (259)
T cd05037         232 ELANLINQCWTYDPTKRPSFRAILRD  257 (259)
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHHh
Confidence            89999999998 99999999999874


No 294
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.93  E-value=1.1e-25  Score=221.13  Aligned_cols=168  Identities=18%  Similarity=0.274  Sum_probs=136.7

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++.+. ..+++..++.++.||+.||+|||+++  ++||||||+|||++.+ +.+|++|||.+.........
T Consensus        87 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~--iiH~dikp~nili~~~-~~~~l~dfg~~~~~~~~~~~  163 (266)
T cd05064          87 YMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG--YVHKGLAAHKVLVNSD-LVCKISGFRRLQEDKSEAIY  163 (266)
T ss_pred             eCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeeccccHhhEEEcCC-CcEEECCCcccccccccchh
Confidence            57899999999874 57999999999999999999999998  9999999999999876 78999999987654222111


Q ss_pred             --ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHH
Q 010730           80 --HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFV  155 (502)
Q Consensus        80 --~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI  155 (502)
                        ....+++.|+|||++. ..++.++|||||||++|+|++ |..||.+ .....+.+.+..+..+ ..+...+..+.+++
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li  241 (266)
T cd05064         164 TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWD-MSGQDVIKAVEDGFRL-PAPRNCPNLLHQLM  241 (266)
T ss_pred             cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCc-CCHHHHHHHHHCCCCC-CCCCCCCHHHHHHH
Confidence              1234567899999875 568999999999999999775 9999976 3445566666665433 23455678899999


Q ss_pred             HHhhh-CcCCCCCHHHHhc
Q 010730          156 GKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL~  173 (502)
                      .+||. +|.+||++.+|++
T Consensus       242 ~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         242 LDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HHHcCCCchhCCCHHHHHH
Confidence            99999 9999999999876


No 295
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.93  E-value=1.2e-25  Score=219.39  Aligned_cols=170  Identities=29%  Similarity=0.469  Sum_probs=138.9

Q ss_pred             CCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC
Q 010730            1 MFTSGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k----~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~   76 (502)
                      |+.+|+|.+++..    ...+++..++.++.||+.||.|||+++  ++|+||||+||+++.+ +.++|+|||++......
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~~-~~~~l~dfg~~~~~~~~  159 (267)
T cd08229          83 LADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITAT-GVVKLGDLGLGRFFSSK  159 (267)
T ss_pred             ecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCC-CCEEECcchhhhccccC
Confidence            4678999999874    356899999999999999999999998  9999999999999876 78999999998765432


Q ss_pred             C-CcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCC-ChHHHHHHhhcCCCCCcccccccHHHHH
Q 010730           77 Q-QAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECS-NPAQIYKKVTSGKLPGAFHRIQDAEARR  153 (502)
Q Consensus        77 ~-~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~-~~~ql~~kI~~g~~p~~~~~~~s~~l~~  153 (502)
                      . ......|++.|+|||++.+ .++.++|+||||+++|+|++|..||.+.. ....+.+.+.....+...+...+..+++
T Consensus       160 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd08229         160 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQ  239 (267)
T ss_pred             CcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHH
Confidence            2 2334578999999998754 47889999999999999999999996532 2345555665555444444456789999


Q ss_pred             HHHHhhh-CcCCCCCHHHHhc
Q 010730          154 FVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      +|.+||. +|.+|||+.++++
T Consensus       240 li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         240 LVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             HHHHhcCCCcccCCCHHHHHH
Confidence            9999998 9999999998775


No 296
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=99.93  E-value=1e-25  Score=221.80  Aligned_cols=170  Identities=28%  Similarity=0.444  Sum_probs=133.6

Q ss_pred             CCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cc
Q 010730            4 SGTLREYRKKY---TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QA   79 (502)
Q Consensus         4 gGsL~~yi~k~---~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~   79 (502)
                      .|+|.+++...   ..+++..+..++.||+.||.|||+.+  |+||||||+||+++.+ +.+||+|||++....... ..
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~h~dl~p~ni~~~~~-~~~~l~d~g~~~~~~~~~~~~  157 (284)
T cd07836          81 DKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR--VLHRDLKPQNLLINKR-GELKLADFGLARAFGIPVNTF  157 (284)
T ss_pred             CccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECCC-CcEEEeecchhhhhcCCcccc
Confidence            36899998764   35899999999999999999999998  9999999999999876 799999999997553322 12


Q ss_pred             ccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcC-CCC---------------C
Q 010730           80 HSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSG-KLP---------------G  141 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g-~~p---------------~  141 (502)
                      ....+++.|++||++.+  .++.++|||||||++|+|++|..||.+...... +.++... ..|               .
T Consensus       158 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd07836         158 SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQ-LLKIFRIMGTPTESTWPGISQLPEYKP  236 (284)
T ss_pred             ccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhHHHHhcCchhcc
Confidence            34567899999998754  378899999999999999999999987544333 2222110 000               0


Q ss_pred             c-----------ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          142 A-----------FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       142 ~-----------~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      .           +....+..++++|.+||. +|.+||++.+++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         237 TFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             cccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            0           011236788999999998 99999999999999997


No 297
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93  E-value=1.6e-25  Score=225.87  Aligned_cols=169  Identities=25%  Similarity=0.402  Sum_probs=137.4

Q ss_pred             CCCCCcHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEE
Q 010730            1 MFTSGTLREYRKKY----------------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKI   64 (502)
Q Consensus         1 ~~tgGsL~~yi~k~----------------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL   64 (502)
                      |+.+|+|.+|+...                ..++...+..++.||+.||.|||+++  |+||||||+|||++.+ +.+||
T Consensus        99 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp~Nill~~~-~~~kL  175 (314)
T cd05099          99 YAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR--CIHRDLAARNVLVTED-NVMKI  175 (314)
T ss_pred             cCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC--eeeccccceeEEEcCC-CcEEE
Confidence            57899999999764                24888999999999999999999998  9999999999999876 79999


Q ss_pred             EecCCceeccCCCC---cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCC
Q 010730           65 GDLGLAAILRGSQQ---AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKL  139 (502)
Q Consensus        65 ~DFGlA~~~~~~~~---~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~  139 (502)
                      +|||+++.......   .....+++.|+|||++. +.++.++|||||||++|+|++ |..||.. ....+++..+..+..
T Consensus       176 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~  254 (314)
T cd05099         176 ADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPG-IPVEELFKLLREGHR  254 (314)
T ss_pred             ccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHcCCC
Confidence            99999976543211   12223456899999875 458899999999999999999 8999965 556677777766543


Q ss_pred             CCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          140 PGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       140 p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      . ..+...+.+++++|.+||. +|.+||++.++++.
T Consensus       255 ~-~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~  289 (314)
T cd05099         255 M-DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEA  289 (314)
T ss_pred             C-CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            2 2334456789999999998 99999999999874


No 298
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.93  E-value=1.6e-25  Score=219.80  Aligned_cols=170  Identities=23%  Similarity=0.345  Sum_probs=132.0

Q ss_pred             CCCCCcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccC
Q 010730            1 MFTSGTLREYRKKYT-----RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG   75 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~-----~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~   75 (502)
                      |+.+|+|.+++...+     ..++..++.++.||+.||+|||+.+  |+||||||+||+++.+ +.+||+|||++.....
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dlkp~nil~~~~-~~~kL~dfg~~~~~~~  152 (269)
T cd05087          76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN--FIHSDLALRNCLLTAD-LTVKIGDYGLSHNKYK  152 (269)
T ss_pred             CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcCC-CcEEECCccccccccC
Confidence            578999999997532     4567788899999999999999998  9999999999999886 7899999999865432


Q ss_pred             CCC---cccccCCCcccCcccccc--------CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCC---
Q 010730           76 SQQ---AHSVIGTPEFMAPELYEE--------DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLP---  140 (502)
Q Consensus        76 ~~~---~~s~vGTp~Y~APEvl~~--------~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p---  140 (502)
                      ...   .....|++.|+|||++..        .++.++|||||||++|+|++ |..||....+...+...+......   
T Consensus       153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  232 (269)
T cd05087         153 EDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPK  232 (269)
T ss_pred             cceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCC
Confidence            211   123457889999998753        25789999999999999996 999997755444433333332221   


Q ss_pred             CcccccccHHHHHHHHHhhhCcCCCCCHHHHhc
Q 010730          141 GAFHRIQDAEARRFVGKCLENVSKRLPAKELLL  173 (502)
Q Consensus       141 ~~~~~~~s~~l~~LI~kcL~dP~kRpSa~ELL~  173 (502)
                      ..+....+..+++++.+|+.+|.+|||++||+.
T Consensus       233 ~~~~~~~~~~~~~l~~~c~~~P~~Rpt~~~l~~  265 (269)
T cd05087         233 PRLKLPLSDRWYEVMQFCWLQPEQRPSAEEVHL  265 (269)
T ss_pred             CccCCCCChHHHHHHHHHhcCcccCCCHHHHHH
Confidence            122233567889999999989999999999985


No 299
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=99.93  E-value=9.1e-26  Score=224.57  Aligned_cols=170  Identities=27%  Similarity=0.424  Sum_probs=131.0

Q ss_pred             CCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC----
Q 010730            4 SGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ----   78 (502)
Q Consensus         4 gGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~----   78 (502)
                      +++|.+++.. ...+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++........    
T Consensus        98 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~  174 (311)
T cd07866          98 DHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH--ILHRDIKAANILIDNQ-GILKIADFGLARPYDGPPPNPKG  174 (311)
T ss_pred             CcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC-CCEEECcCccchhccCCCccccc
Confidence            4567777764 457999999999999999999999998  9999999999999887 7999999999976532211    


Q ss_pred             --------cccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcC--CC-------
Q 010730           79 --------AHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSG--KL-------  139 (502)
Q Consensus        79 --------~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g--~~-------  139 (502)
                              .....|++.|+|||++.+  .++.++|||||||++|+|++|.+||.+... ...+..+...  ..       
T Consensus       175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  253 (311)
T cd07866         175 GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSD-IDQLHLIFKLCGTPTEETWPG  253 (311)
T ss_pred             CCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCChhhchh
Confidence                    123467899999997753  478999999999999999999999976333 3322222210  00       


Q ss_pred             ----------------CCcc---cccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          140 ----------------PGAF---HRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       140 ----------------p~~~---~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                                      +...   .......+.+||.+||. +|.+|||+.|++.||||
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         254 WRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             hhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence                            0000   01123678899999998 99999999999999997


No 300
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.93  E-value=1.5e-25  Score=222.21  Aligned_cols=169  Identities=23%  Similarity=0.332  Sum_probs=135.3

Q ss_pred             CCCCCcHHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCC
Q 010730            1 MFTSGTLREYRKKYT-----------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGL   69 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~-----------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGl   69 (502)
                      |+.+|+|.+++.+..           .+++..++.++.||+.||+|||+++  |+||||||+||+++.+ +.++|+|||+
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~--i~H~dlkp~Nili~~~-~~~~l~dfg~  176 (296)
T cd05051         100 YMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN--FVHRDLATRNCLVGKN-YTIKIADFGM  176 (296)
T ss_pred             cCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC--ccccccchhceeecCC-CceEEccccc
Confidence            467899999998766           7999999999999999999999998  9999999999999887 7999999999


Q ss_pred             ceeccCCC---CcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh--ccCCCCCCCChHHHHHHhhcC------
Q 010730           70 AAILRGSQ---QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT--SEYPYSECSNPAQIYKKVTSG------  137 (502)
Q Consensus        70 A~~~~~~~---~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT--G~~Pf~~~~~~~ql~~kI~~g------  137 (502)
                      +.......   ......+++.|+|||++. +.++.++|||||||++|+|++  |..||... ...++++.+...      
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~  255 (296)
T cd05051         177 SRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL-TDQQVIENAGHFFRDDGR  255 (296)
T ss_pred             eeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc-ChHHHHHHHHhccccccc
Confidence            97654322   123455788999999875 468999999999999999998  77888653 344444444332      


Q ss_pred             CCCCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          138 KLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       138 ~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      ..........+.++.++|.+||. +|.+|||+.||++
T Consensus       256 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         256 QIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             cccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            11112223346789999999998 9999999999976


No 301
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93  E-value=1.7e-25  Score=223.90  Aligned_cols=169  Identities=27%  Similarity=0.412  Sum_probs=138.8

Q ss_pred             CCCCCcHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEE
Q 010730            1 MFTSGTLREYRKKY----------------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKI   64 (502)
Q Consensus         1 ~~tgGsL~~yi~k~----------------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL   64 (502)
                      |+.+|+|.+|+.+.                ..++...+..++.||+.||.|||+++  |+||||||+||+++.+ +.+||
T Consensus       102 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g--ivH~dlkp~Nili~~~-~~~kl  178 (304)
T cd05101         102 YASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK--CIHRDLAARNVLVTEN-NVMKI  178 (304)
T ss_pred             cCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC--eeecccccceEEEcCC-CcEEE
Confidence            56789999999764                24778889999999999999999998  9999999999999876 79999


Q ss_pred             EecCCceeccCCCC---cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCC
Q 010730           65 GDLGLAAILRGSQQ---AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKL  139 (502)
Q Consensus        65 ~DFGlA~~~~~~~~---~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~  139 (502)
                      +|||+++.+.....   .....+++.|+|||++. ..++.++||||||+++|+|++ |..||.+ ....++++.+..+..
T Consensus       179 ~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~  257 (304)
T cd05101         179 ADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLLKEGHR  257 (304)
T ss_pred             CCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCccc-CCHHHHHHHHHcCCc
Confidence            99999987643221   22234678899999875 458899999999999999998 8888866 466777777766543


Q ss_pred             CCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          140 PGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       140 p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      . ..+...+..+++||.+||. +|.+||++.|+++.
T Consensus       258 ~-~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         258 M-DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             C-CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            3 2334567899999999998 99999999999975


No 302
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.93  E-value=2e-25  Score=217.93  Aligned_cols=168  Identities=23%  Similarity=0.367  Sum_probs=136.6

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++.+.  ..+++..+..++.||+.||.|||+.+  |+||||||+||+++.+ +.+||+|||++........
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~dl~~~Nill~~~-~~~~l~dfg~~~~~~~~~~  157 (260)
T cd05069          81 FMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN--YIHRDLRAANILVGDN-LVCKIADFGLARLIEDNEY  157 (260)
T ss_pred             cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcCC-CeEEECCCccceEccCCcc
Confidence            56789999999764  34889999999999999999999988  9999999999999876 7899999999976643221


Q ss_pred             --cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 --AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 --~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                        .....++..|+|||++. ..++.++|||||||++|+|++ |..||.+ ......+..+..+..+ ..+...+..++++
T Consensus       158 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  235 (260)
T cd05069         158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG-MVNREVLEQVERGYRM-PCPQGCPESLHEL  235 (260)
T ss_pred             cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHcCCCC-CCCcccCHHHHHH
Confidence              12234677899999775 458899999999999999999 9999977 4445556666554322 3334457889999


Q ss_pred             HHHhhh-CcCCCCCHHHHhc
Q 010730          155 VGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~  173 (502)
                      |.+||. +|.+||+++++++
T Consensus       236 i~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         236 MKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             HHHHccCCcccCcCHHHHHH
Confidence            999998 9999999999876


No 303
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.93  E-value=2.1e-25  Score=217.50  Aligned_cols=168  Identities=23%  Similarity=0.374  Sum_probs=136.2

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++.+.  ..+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++..+.....
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~Nili~~~-~~~~l~dfg~~~~~~~~~~  157 (260)
T cd05070          81 YMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN--YIHRDLRSANILVGDG-LVCKIADFGLARLIEDNEY  157 (260)
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEEeCC-ceEEeCCceeeeeccCccc
Confidence            56789999999763  45899999999999999999999998  9999999999999886 7899999999977543221


Q ss_pred             --cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 --AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 --~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                        .....++..|+|||++. ..++.++||||||+++|+|++ |..||.+ .+..++...+..+..+ ..+...+..++++
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  235 (260)
T cd05070         158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG-MNNREVLEQVERGYRM-PCPQDCPISLHEL  235 (260)
T ss_pred             ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCC-CCHHHHHHHHHcCCCC-CCCCcCCHHHHHH
Confidence              12234567899999775 458889999999999999999 8999976 4445556666544322 3344557889999


Q ss_pred             HHHhhh-CcCCCCCHHHHhc
Q 010730          155 VGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~  173 (502)
                      +.+||. +|.+|||+.+++.
T Consensus       236 i~~~l~~~p~~Rpt~~~l~~  255 (260)
T cd05070         236 MLQCWKKDPEERPTFEYLQS  255 (260)
T ss_pred             HHHHcccCcccCcCHHHHHH
Confidence            999998 9999999999874


No 304
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.93  E-value=1.6e-25  Score=221.24  Aligned_cols=169  Identities=23%  Similarity=0.368  Sum_probs=138.4

Q ss_pred             CCCCCcHHHHHHhC-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEE
Q 010730            1 MFTSGTLREYRKKY-----------------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIK   63 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-----------------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vK   63 (502)
                      |+.+|+|.+++...                 ..+++..+..++.||+.||.|||+++  |+||||||+|||++.+ +.+|
T Consensus        88 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~nili~~~-~~~k  164 (283)
T cd05090          88 YLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF--FVHKDLAARNILIGEQ-LHVK  164 (283)
T ss_pred             cCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC--eehhccccceEEEcCC-CcEE
Confidence            56789999999532                 23788899999999999999999998  9999999999999876 6899


Q ss_pred             EEecCCceeccCCC---CcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCC
Q 010730           64 IGDLGLAAILRGSQ---QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGK  138 (502)
Q Consensus        64 L~DFGlA~~~~~~~---~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~  138 (502)
                      |+|||+++......   ......++..|+|||++. ..++.++|||||||++|+|++ |..||.+ .....+.+.+....
T Consensus       165 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~-~~~~~~~~~~~~~~  243 (283)
T cd05090         165 ISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYG-FSNQEVIEMVRKRQ  243 (283)
T ss_pred             eccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHcCC
Confidence            99999997653322   123345677899999875 458999999999999999998 9999976 45566677766655


Q ss_pred             CCCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          139 LPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       139 ~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .+ ..+...+..++++|.+||. +|.+||++.+|+++
T Consensus       244 ~~-~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         244 LL-PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             cC-CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            44 2344567899999999999 99999999999875


No 305
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93  E-value=1.1e-25  Score=226.02  Aligned_cols=169  Identities=27%  Similarity=0.417  Sum_probs=138.3

Q ss_pred             CCCCCcHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEE
Q 010730            1 MFTSGTLREYRKKYT----------------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKI   64 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~----------------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL   64 (502)
                      |+.+|+|.+|+...+                .++...++.++.||+.||+|||+++  ++||||||+||+++.+ +.+||
T Consensus       105 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp~Nill~~~-~~~kL  181 (307)
T cd05098         105 YASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTED-NVMKI  181 (307)
T ss_pred             cCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC--cccccccHHheEEcCC-CcEEE
Confidence            567899999997642                4888999999999999999999998  9999999999999877 79999


Q ss_pred             EecCCceeccCCCC---cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCC
Q 010730           65 GDLGLAAILRGSQQ---AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKL  139 (502)
Q Consensus        65 ~DFGlA~~~~~~~~---~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~  139 (502)
                      +|||++..+.....   .....+++.|+|||++. ..++.++|||||||++|+|++ |..||.. .+..++.+.+..+..
T Consensus       182 ~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~  260 (307)
T cd05098         182 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLKEGHR  260 (307)
T ss_pred             CCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCc-CCHHHHHHHHHcCCC
Confidence            99999876543211   11123457899999775 458899999999999999998 8889865 566777777766654


Q ss_pred             CCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          140 PGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       140 p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      + ..+...+.+++++|.+||. +|.+||++.+++++
T Consensus       261 ~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         261 M-DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             C-CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            3 3344557899999999998 99999999999875


No 306
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.93  E-value=2.4e-25  Score=214.61  Aligned_cols=168  Identities=26%  Similarity=0.405  Sum_probs=140.0

Q ss_pred             CCCCCcHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKYTR--VDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~--L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++.....  +++..+..++.||+.||+|||+.+  ++||||||+||+++.+ +.++|+|||++........
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~--~~h~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~~  158 (258)
T smart00219       82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN--FIHRDLAARNCLVGEN-LVVKISDFGLSRDLYDDDY  158 (258)
T ss_pred             ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC--eeecccccceEEEccC-CeEEEcccCCceecccccc
Confidence            4678999999987554  999999999999999999999998  9999999999999887 7899999999987654322


Q ss_pred             cc--cccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 AH--SVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 ~~--s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      ..  ...+++.|+|||.+. ..++.++|||||||++|+|++ |.+||.. .+...+++.+..+..+ ......+.++.++
T Consensus       159 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  236 (258)
T smart00219      159 YKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPG-MSNEEVLEYLKKGYRL-PKPENCPPEIYKL  236 (258)
T ss_pred             cccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHhcCCCC-CCCCcCCHHHHHH
Confidence            11  123678999999875 458999999999999999998 8888865 5667777777766554 3334467899999


Q ss_pred             HHHhhh-CcCCCCCHHHHhc
Q 010730          155 VGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~  173 (502)
                      +.+||. +|.+|||+.|+++
T Consensus       237 i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      237 MLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             HHHHCcCChhhCcCHHHHHh
Confidence            999999 9999999999986


No 307
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.93  E-value=1.6e-25  Score=217.71  Aligned_cols=169  Identities=25%  Similarity=0.415  Sum_probs=138.7

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++.+.  ..+++..+..++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++........
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~h~dl~~~nilv~~~-~~~kl~d~g~~~~~~~~~~  159 (261)
T cd05148          83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN--SIHRDLAARNILVGED-LVCKVADFGLARLIKEDVY  159 (261)
T ss_pred             ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccCcceEEEcCC-ceEEEccccchhhcCCccc
Confidence            56789999999763  46899999999999999999999998  9999999999999887 7999999999976543221


Q ss_pred             -cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHH
Q 010730           79 -AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFV  155 (502)
Q Consensus        79 -~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI  155 (502)
                       .....+++.|+|||++. ..++.++||||||+++|+|++ |..||.. .+..++++.+..+..+ ..+...+..+.++|
T Consensus       160 ~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i  237 (261)
T cd05148         160 LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPG-MNNHEVYDQITAGYRM-PCPAKCPQEIYKIM  237 (261)
T ss_pred             cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCc-CCHHHHHHHHHhCCcC-CCCCCCCHHHHHHH
Confidence             12334577899999875 458889999999999999998 8999976 4556667776655332 33455678999999


Q ss_pred             HHhhh-CcCCCCCHHHHhcC
Q 010730          156 GKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .+||. +|.+|||+++|++.
T Consensus       238 ~~~l~~~p~~Rpt~~~l~~~  257 (261)
T cd05148         238 LECWAAEPEDRPSFKALREE  257 (261)
T ss_pred             HHHcCCCchhCcCHHHHHHH
Confidence            99998 99999999998863


No 308
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.93  E-value=6e-26  Score=227.83  Aligned_cols=170  Identities=28%  Similarity=0.360  Sum_probs=139.5

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCccccc
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVI   83 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~v   83 (502)
                      .++|.+.+.  -.++.+.++.++.|++.|++|||+.+  |+||||||+||+++.. ..+||.|||+|..-.....+..++
T Consensus       104 ~~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~--IihRdLkPsnivv~~~-~~lKi~dfg~ar~e~~~~~mtpyV  178 (369)
T KOG0665|consen  104 DANLCQVIL--MELDHETISYILYQMLCGIKHLHSAG--IIHRDLKPSNIVVNSD-CTLKILDFGLARTEDTDFMMTPYV  178 (369)
T ss_pred             hhHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcc--eeecccCcccceecch-hheeeccchhhcccCcccccCchh
Confidence            456777776  46899999999999999999999998  9999999999999987 689999999998766555667789


Q ss_pred             CCCcccCcccc-ccCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCC------------------------
Q 010730           84 GTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGK------------------------  138 (502)
Q Consensus        84 GTp~Y~APEvl-~~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~------------------------  138 (502)
                      .|..|.|||++ .-.|.+.+||||+|||+.||++|..-|.+....+++.+.+..-.                        
T Consensus       179 vtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y  258 (369)
T KOG0665|consen  179 VTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQY  258 (369)
T ss_pred             heeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHh
Confidence            99999999976 44599999999999999999999999987665666544332110                        


Q ss_pred             --------CCCc-------ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCc
Q 010730          139 --------LPGA-------FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLA  178 (502)
Q Consensus       139 --------~p~~-------~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~  178 (502)
                              +|..       ..+.....+++++.+||. +|.+|.+++++|.|||++
T Consensus       259 ~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  259 QAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             hccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence                    1111       111234568999999998 999999999999999997


No 309
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.93  E-value=1.4e-25  Score=224.59  Aligned_cols=169  Identities=21%  Similarity=0.317  Sum_probs=130.2

Q ss_pred             CCCCCcHHHHHHhCC-------------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCc
Q 010730            1 MFTSGTLREYRKKYT-------------------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQ   61 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~-------------------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~   61 (502)
                      |+.+|+|.+++....                   .+++..+..++.||+.||.|||+++  |+||||||+|||++.+ +.
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--ivH~dlkp~Nill~~~-~~  176 (304)
T cd05096         100 YMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN--FVHRDLATRNCLVGEN-LT  176 (304)
T ss_pred             cCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC--ccccCcchhheEEcCC-cc
Confidence            578999999996532                   3677889999999999999999998  9999999999999976 79


Q ss_pred             EEEEecCCceeccCCCC---cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh--ccCCCCCCCChHHHHHHhh
Q 010730           62 IKIGDLGLAAILRGSQQ---AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT--SEYPYSECSNPAQIYKKVT  135 (502)
Q Consensus        62 vKL~DFGlA~~~~~~~~---~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT--G~~Pf~~~~~~~ql~~kI~  135 (502)
                      +||+|||+++.+.....   .....+++.|+|||++. +.++.++|||||||++|+|++  +..||.+.. ..++...+.
T Consensus       177 ~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~-~~~~~~~~~  255 (304)
T cd05096         177 IKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELT-DEQVIENAG  255 (304)
T ss_pred             EEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCC-HHHHHHHHH
Confidence            99999999976543221   22345678999999765 568999999999999999986  667887643 333333221


Q ss_pred             c----C--CCCCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          136 S----G--KLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       136 ~----g--~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      .    .  ......+...+..+.++|.+||. +|.+|||+.+|..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         256 EFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             HHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence            1    1  11112233456789999999999 9999999999864


No 310
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.93  E-value=2.7e-25  Score=224.63  Aligned_cols=170  Identities=29%  Similarity=0.497  Sum_probs=138.9

Q ss_pred             CCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccc
Q 010730            4 SGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSV   82 (502)
Q Consensus         4 gGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~   82 (502)
                      .|+|.+++.. ..++++..++.++.||+.+|.|||+++  |+||||||+||+++.+ +.+||+|||++....   .....
T Consensus       104 ~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dl~p~nili~~~-~~~kL~dfg~~~~~~---~~~~~  177 (313)
T cd06633         104 LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTEP-GQVKLADFGSASKSS---PANSF  177 (313)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChhhEEECCC-CCEEEeecCCCcccC---CCCCc
Confidence            5678888765 457999999999999999999999998  9999999999999876 789999999986432   23356


Q ss_pred             cCCCcccCccccc----cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           83 IGTPEFMAPELYE----EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        83 vGTp~Y~APEvl~----~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      .|++.|+|||++.    +.++.++|||||||++|+|++|..||........+++. .....+.......+..+++||.+|
T Consensus       178 ~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~  256 (313)
T cd06633         178 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI-AQNDSPTLQSNEWTDSFRGFVDYC  256 (313)
T ss_pred             cccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-HhcCCCCCCccccCHHHHHHHHHH
Confidence            7899999999873    45888999999999999999999999775444444443 333333333344567899999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcCC
Q 010730          159 LE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      |. +|.+||++.+++.||||+..
T Consensus       257 l~~~P~~Rp~~~~~l~~~~~~~~  279 (313)
T cd06633         257 LQKIPQERPASAELLRHDFVRRD  279 (313)
T ss_pred             ccCChhhCcCHHHHhcCcccCCC
Confidence            98 99999999999999999754


No 311
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=99.93  E-value=2.1e-25  Score=218.48  Aligned_cols=171  Identities=32%  Similarity=0.474  Sum_probs=134.6

Q ss_pred             CCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cccc
Q 010730            4 SGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QAHS   81 (502)
Q Consensus         4 gGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~~s   81 (502)
                      +++|.+++.+. ..+++..++.++.||+.||.|||.++  |+||||+|+||+++.+ +.+||+|||++....... ....
T Consensus        81 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~~l~~~ni~~~~~-~~~~l~d~g~~~~~~~~~~~~~~  157 (282)
T cd07829          81 DMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR--ILHRDLKPQNILINRD-GVLKLADFGLARAFGIPLRTYTH  157 (282)
T ss_pred             CcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChheEEEcCC-CCEEEecCCcccccCCCccccCc
Confidence            47999999886 57999999999999999999999998  9999999999999886 799999999997654332 2234


Q ss_pred             ccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhh-------------------cCCCC
Q 010730           82 VIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVT-------------------SGKLP  140 (502)
Q Consensus        82 ~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~-------------------~g~~p  140 (502)
                      ..++..|+|||++.+  .++.++|||||||++|+|++|.+||........+.+...                   ...++
T Consensus       158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (282)
T cd07829         158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFP  237 (282)
T ss_pred             cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccc
Confidence            556889999997743  588899999999999999999999976433322211111                   00011


Q ss_pred             Cc-------ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          141 GA-------FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       141 ~~-------~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      ..       .....+..+.++|.+||. +|.+||++.+++.||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         238 KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            00       001126789999999998 99999999999999997


No 312
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.93  E-value=3.6e-25  Score=215.95  Aligned_cols=167  Identities=25%  Similarity=0.411  Sum_probs=136.0

Q ss_pred             CCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKYT--RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~--~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++....  .+++..+..++.||+.||.|||..+  |+||||||+||+++.+ +.+||+|||++........
T Consensus        82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~-~~~~l~dfg~~~~~~~~~~  158 (261)
T cd05068          82 LMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN--YIHRDLAARNVLVGEN-NICKVADFGLARVIKEDIY  158 (261)
T ss_pred             cccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCcceEEEcCC-CCEEECCcceEEEccCCcc
Confidence            457999999997654  6999999999999999999999988  9999999999999987 7899999999987653221


Q ss_pred             cccccC---CCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHH
Q 010730           79 AHSVIG---TPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARR  153 (502)
Q Consensus        79 ~~s~vG---Tp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~  153 (502)
                       ....|   +..|+|||++. ..++.++||||||+++|+|++ |..||.+ .+..+++..+..+... ......+..+.+
T Consensus       159 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  235 (261)
T cd05068         159 -EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPG-MTNAEVLQQVDQGYRM-PCPPGCPKELYD  235 (261)
T ss_pred             -cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCC-CCHHHHHHHHHcCCCC-CCCCcCCHHHHH
Confidence             12223   45799999875 458889999999999999999 9999976 4555666666554322 233445788999


Q ss_pred             HHHHhhh-CcCCCCCHHHHhc
Q 010730          154 FVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      ++.+||. +|.+||++.+|+.
T Consensus       236 li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         236 IMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             HHHHHhhcCcccCCCHHHHHH
Confidence            9999998 9999999999875


No 313
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93  E-value=3.5e-26  Score=230.41  Aligned_cols=180  Identities=22%  Similarity=0.419  Sum_probs=155.2

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCcee-ccCCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI-LRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~-~~~~~~~   79 (502)
                      |..||+|-=..++..+++++.++.|...|..||.|||+.|  ||.||||.+|+|++.. |++||+|+|+++. +..+...
T Consensus       332 yv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rg--iiyrdlkldnvlldae-ghikltdygmcke~l~~gd~t  408 (593)
T KOG0695|consen  332 YVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERG--IIYRDLKLDNVLLDAE-GHIKLTDYGMCKEGLGPGDTT  408 (593)
T ss_pred             EecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcC--eeeeeccccceEEccC-CceeecccchhhcCCCCCccc
Confidence            5789999999999999999999999999999999999999  9999999999999987 8999999999986 4555667


Q ss_pred             ccccCCCcccCccccccC-CCCcccchhHHHHHHHHhhccCCCCC--C-----CChHHHHHHhhcCCCCCcccccccHHH
Q 010730           80 HSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSEYPYSE--C-----SNPAQIYKKVTSGKLPGAFHRIQDAEA  151 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~~-ys~~~DIWSLGviLyeLLTG~~Pf~~--~-----~~~~ql~~kI~~g~~p~~~~~~~s~~l  151 (502)
                      .+++|||.|+|||++.+. |+..+|+|+|||+++||+.|+.||.-  .     ...+-+++.|...++  .+++..+-.+
T Consensus       409 stfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi--riprslsvka  486 (593)
T KOG0695|consen  409 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI--RIPRSLSVKA  486 (593)
T ss_pred             ccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc--cccceeehhh
Confidence            789999999999999864 99999999999999999999999942  2     233456777776655  3455567778


Q ss_pred             HHHHHHhhh-CcCCCCC------HHHHhcCCCCcCCCCCCC
Q 010730          152 RRFVGKCLE-NVSKRLP------AKELLLDPFLASDAGEPL  185 (502)
Q Consensus       152 ~~LI~kcL~-dP~kRpS------a~ELL~hPff~~~~~~~l  185 (502)
                      ..+++..|. ||.+|+.      ..++..|+||+...|..+
T Consensus       487 s~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~l  527 (593)
T KOG0695|consen  487 SHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLL  527 (593)
T ss_pred             HHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHH
Confidence            889999998 9999975      789999999998777553


No 314
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular 
Probab=99.93  E-value=1.9e-25  Score=216.40  Aligned_cols=168  Identities=20%  Similarity=0.365  Sum_probs=133.4

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++.+. ..+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++.........
T Consensus        74 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~~~~~~  150 (252)
T cd05084          74 LVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH--CIHRDLAARNCLVTEK-NVLKISDFGMSREEEDGVYA  150 (252)
T ss_pred             eccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEEcCC-CcEEECccccCccccccccc
Confidence            56799999999764 46899999999999999999999998  9999999999999876 78999999998754322111


Q ss_pred             ---ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           80 ---HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        80 ---~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                         ....++..|+|||.+. +.++.++|||||||++|+|++ |..||... ........+..+.. ...+...+..+.++
T Consensus       151 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~l  228 (252)
T cd05084         151 STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANL-SNQQTREAIEQGVR-LPCPELCPDAVYRL  228 (252)
T ss_pred             ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc-CHHHHHHHHHcCCC-CCCcccCCHHHHHH
Confidence               1112345799999875 458899999999999999998 88998653 33444444444322 23445567899999


Q ss_pred             HHHhhh-CcCCCCCHHHHhc
Q 010730          155 VGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~  173 (502)
                      +.+||. +|.+||++.++++
T Consensus       229 i~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         229 MERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             HHHHcCCChhhCcCHHHHHH
Confidence            999998 9999999999985


No 315
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.93  E-value=1.7e-25  Score=220.71  Aligned_cols=174  Identities=31%  Similarity=0.567  Sum_probs=143.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-Cc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~~   79 (502)
                      |+.+|+|.+++.+ ..+++..+..++.||+.+|.|||..+  ++|+||||+||+++.+ +.++|+|||++..+.... ..
T Consensus        83 ~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~Ni~i~~~-~~~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06641          83 YLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQIKR  158 (277)
T ss_pred             eCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCC--eecCCCCHHhEEECCC-CCEEEeecccceecccchhhh
Confidence            5678999999975 46899999999999999999999988  9999999999999876 789999999987654322 12


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      ....|+..|+|||.+.. .++.++|+|||||++|+|++|..||.. .+...+...+..+..+ .+....+.++.++|.+|
T Consensus       159 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~  236 (277)
T cd06641         159 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSE-LHPMKVLFLIPKNNPP-TLEGNYSKPLKEFVEAC  236 (277)
T ss_pred             ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCc-cchHHHHHHHhcCCCC-CCCcccCHHHHHHHHHH
Confidence            34568999999998754 478899999999999999999999975 4445555555444332 34445678899999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcCC
Q 010730          159 LE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      |. +|.+||++.++++||||...
T Consensus       237 l~~~p~~Rp~~~~~l~~~~~~~~  259 (277)
T cd06641         237 LNKEPSFRPTAKELLKHKFIVRF  259 (277)
T ss_pred             ccCChhhCcCHHHHHhCHHHhhh
Confidence            98 99999999999999999753


No 316
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.93  E-value=1.8e-25  Score=219.25  Aligned_cols=170  Identities=24%  Similarity=0.402  Sum_probs=134.8

Q ss_pred             CCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC--Ccc
Q 010730            4 SGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ--QAH   80 (502)
Q Consensus         4 gGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~--~~~   80 (502)
                      +++|.+++.+. ..+++..++.++.||+.||+|||.++  ++|+||||+||+++.+ +.+||+|||++.......  ...
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--~~h~dl~p~nil~~~~-~~~~l~d~g~~~~~~~~~~~~~~  159 (287)
T cd07840          83 DHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG--ILHRDIKGSNILINND-GVLKLADFGLARPYTKRNSADYT  159 (287)
T ss_pred             cccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEEcCC-CCEEEccccceeeccCCCccccc
Confidence            46899998765 57999999999999999999999998  9999999999999987 799999999998765432  123


Q ss_pred             cccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcC-CC--CC--------------
Q 010730           81 SVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSG-KL--PG--------------  141 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g-~~--p~--------------  141 (502)
                      ...++..|+|||.+.+  .++.++||||||+++|+|++|..||..... ......+... ..  +.              
T Consensus       160 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T cd07840         160 NRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE-LEQLEKIFELCGSPTDENWPGVSKLPWFENL  238 (287)
T ss_pred             ccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCchhhccccccchhhhhc
Confidence            3567889999997653  478999999999999999999999976433 3333322210 00  00              


Q ss_pred             ------------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          142 ------------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       142 ------------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                                  .+....+..+.++|.+||. +|.+||++.+++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         239 KPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             cccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence                        0111136788999999998 99999999999999997


No 317
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.93  E-value=3.3e-25  Score=218.03  Aligned_cols=169  Identities=20%  Similarity=0.355  Sum_probs=130.8

Q ss_pred             CCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC
Q 010730            1 MFTSGTLREYRKKY----TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k~----~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~   76 (502)
                      |+.+|+|.+++.+.    ..+++..++.++.||+.||+|||+.+  |+||||||+|||++.+ +.+||+|||++......
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nil~~~~-~~~~l~Dfg~~~~~~~~  152 (268)
T cd05086          76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN--FLHSDLALRNCFLTSD-LTVKVGDYGIGPSRYKE  152 (268)
T ss_pred             cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC--eeccCCccceEEEcCC-ccEEecccccccccCcc
Confidence            57899999999764    34677788999999999999999988  9999999999999876 78999999998643211


Q ss_pred             C---CcccccCCCcccCcccccc--------CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCC-C---C
Q 010730           77 Q---QAHSVIGTPEFMAPELYEE--------DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGK-L---P  140 (502)
Q Consensus        77 ~---~~~s~vGTp~Y~APEvl~~--------~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~-~---p  140 (502)
                      .   ......|++.|+|||++..        .++.++|||||||++|+|++ |..||..... .+++.++..+. .   .
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~  231 (268)
T cd05086         153 DYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-REVLNHVIKDQQVKLFK  231 (268)
T ss_pred             hhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHhhcccccCC
Confidence            1   1234568899999998742        25678999999999999997 6778876443 34444433322 1   1


Q ss_pred             CcccccccHHHHHHHHHhhhCcCCCCCHHHHhc
Q 010730          141 GAFHRIQDAEARRFVGKCLENVSKRLPAKELLL  173 (502)
Q Consensus       141 ~~~~~~~s~~l~~LI~kcL~dP~kRpSa~ELL~  173 (502)
                      ..+....++.+++++.+||.+|.+||+++++++
T Consensus       232 ~~~~~~~~~~~~~l~~~c~~~P~~Rp~~~~i~~  264 (268)
T cd05086         232 PQLELPYSERWYEVLQFCWLSPEKRATAEEVHR  264 (268)
T ss_pred             CccCCCCcHHHHHHHHHHhhCcccCCCHHHHHH
Confidence            223334578899999999999999999999976


No 318
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.93  E-value=2.4e-25  Score=224.24  Aligned_cols=169  Identities=28%  Similarity=0.511  Sum_probs=138.3

Q ss_pred             CCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccc
Q 010730            4 SGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSV   82 (502)
Q Consensus         4 gGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~   82 (502)
                      .|+|.+++.. ...+++..++.++.||+.||.|||+++  ++||||||+||+++.+ +.+||+|||++.....   ....
T Consensus        98 ~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~~---~~~~  171 (308)
T cd06634          98 LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEP-GLVKLGDFGSASIMAP---ANXF  171 (308)
T ss_pred             CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHhEEECCC-CcEEECCcccceeecC---cccc
Confidence            4688887754 456999999999999999999999988  9999999999999876 7999999999876543   2345


Q ss_pred             cCCCcccCccccc----cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           83 IGTPEFMAPELYE----EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        83 vGTp~Y~APEvl~----~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      .|++.|+|||++.    +.++.++|||||||++|+|++|..||........++. +..+..+.......+..++++|.+|
T Consensus       172 ~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~c  250 (308)
T cd06634         172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH-IAQNESPALQSGHWSEYFRNFVDSC  250 (308)
T ss_pred             cCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHH-HhhcCCCCcCcccccHHHHHHHHHH
Confidence            7899999999863    3578899999999999999999999976443333443 3334344333445678899999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcC
Q 010730          159 LE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~  179 (502)
                      |. +|.+||++.+++.|||+..
T Consensus       251 l~~~P~~Rp~~~~ll~~~~~~~  272 (308)
T cd06634         251 LQKIPQDRPTSEVLLKHRFVLR  272 (308)
T ss_pred             hhCCcccCCCHHHHhhCccccc
Confidence            98 9999999999999999975


No 319
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.93  E-value=9.7e-26  Score=238.32  Aligned_cols=168  Identities=26%  Similarity=0.413  Sum_probs=139.8

Q ss_pred             CCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKK--YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k--~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      ||..|+|.+|++.  .+.++......|+.||++|++||++++  +|||||...||||+.+ ..+||+|||||+.+....-
T Consensus       282 ~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~--~IHRDLAARNiLV~~~-~~vKIsDFGLAr~~~d~~Y  358 (468)
T KOG0197|consen  282 YMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN--YIHRDLAARNILVDED-LVVKISDFGLARLIGDDEY  358 (468)
T ss_pred             ecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC--ccchhhhhhheeeccC-ceEEEcccccccccCCCce
Confidence            7899999999987  567999999999999999999999999  9999999999999987 6999999999995543322


Q ss_pred             ccc--ccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 AHS--VIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 ~~s--~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      ..+  .--..-|.|||.+. +.++.++|||||||+|+||+| |+.||.+..+ .++.+.+..|..- +.+..+++++.++
T Consensus       359 ~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn-~ev~~~le~GyRl-p~P~~CP~~vY~l  436 (468)
T KOG0197|consen  359 TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN-EEVLELLERGYRL-PRPEGCPDEVYEL  436 (468)
T ss_pred             eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH-HHHHHHHhccCcC-CCCCCCCHHHHHH
Confidence            111  11245699999875 679999999999999999999 9999988655 5566667666432 3455678999999


Q ss_pred             HHHhhh-CcCCCCCHHHHhc
Q 010730          155 VGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~  173 (502)
                      +..||. +|.+|||++.+..
T Consensus       437 M~~CW~~~P~~RPtF~~L~~  456 (468)
T KOG0197|consen  437 MKSCWHEDPEDRPTFETLRE  456 (468)
T ss_pred             HHHHhhCCcccCCCHHHHHH
Confidence            999998 9999999886653


No 320
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.93  E-value=2.4e-26  Score=245.42  Aligned_cols=169  Identities=33%  Similarity=0.515  Sum_probs=143.5

Q ss_pred             CCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceec---cCC
Q 010730            1 MFTSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAIL---RGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~---~~~   76 (502)
                      ++.|-+|..++.. ..+|++.+.+.|++||++|+.|||..+  |||||||..|||+..+ ++|||+||||+..-   ...
T Consensus       468 wCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~--IIHrDLKSnNIFl~~~-~kVkIgDFGLatvk~~w~g~  544 (678)
T KOG0193|consen  468 WCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKN--IIHRDLKSNNIFLHED-LKVKIGDFGLATVKTRWSGE  544 (678)
T ss_pred             hccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhh--hhhhhccccceEEccC-CcEEEecccceeeeeeeccc
Confidence            4678899999964 356999999999999999999999999  9999999999999876 79999999998642   333


Q ss_pred             CCcccccCCCcccCcccccc----CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCC---cccccccH
Q 010730           77 QQAHSVIGTPEFMAPELYEE----DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPG---AFHRIQDA  149 (502)
Q Consensus        77 ~~~~s~vGTp~Y~APEvl~~----~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~---~~~~~~s~  149 (502)
                      .......|...|||||++..    .|+..+||||||+++|||+||.+||. ..+.++|.-.+..|.+-.   ........
T Consensus       545 ~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIifmVGrG~l~pd~s~~~s~~pk  623 (678)
T KOG0193|consen  545 QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQIIFMVGRGYLMPDLSKIRSNCPK  623 (678)
T ss_pred             cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheEEEecccccCccchhhhccCHH
Confidence            44555678899999998852    48999999999999999999999998 588899888888884432   22333456


Q ss_pred             HHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          150 EARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       150 ~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      ++++|+..||. ++++||...+||.
T Consensus       624 ~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  624 AMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             HHHHHHHHHHhcCcccCccHHHHHH
Confidence            89999999999 9999999999887


No 321
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.93  E-value=3.6e-25  Score=217.02  Aligned_cols=168  Identities=22%  Similarity=0.355  Sum_probs=136.6

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++.+.  ..+++..+..++.||+.||+|||+.+  |+||||||+||+++.+ +.+||+|||++..+.....
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~Nill~~~-~~~~L~dfg~~~~~~~~~~  157 (262)
T cd05071          81 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGEN-LVCKVADFGLARLIEDNEY  157 (262)
T ss_pred             cCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcccEEEcCC-CcEEeccCCceeecccccc
Confidence            56889999999864  45899999999999999999999988  9999999999999876 7899999999976643322


Q ss_pred             c--ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 A--HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 ~--~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      .  ....++..|+|||++. ..++.++|||||||++|+|+| |..||.+ ....+++..+..+... ......+..+.++
T Consensus       158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l  235 (262)
T cd05071         158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-MVNREVLDQVERGYRM-PCPPECPESLHDL  235 (262)
T ss_pred             ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCC-CChHHHHHHHhcCCCC-CCccccCHHHHHH
Confidence            1  2344677899999775 558999999999999999999 8889876 4455666666554322 2233457889999


Q ss_pred             HHHhhh-CcCCCCCHHHHhc
Q 010730          155 VGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~  173 (502)
                      |.+||. +|.+||++.++++
T Consensus       236 i~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         236 MCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             HHHHccCCcccCCCHHHHHH
Confidence            999998 9999999999875


No 322
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.93  E-value=2.8e-25  Score=217.25  Aligned_cols=169  Identities=22%  Similarity=0.379  Sum_probs=138.2

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-C
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-Q   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~   78 (502)
                      |+.+|+|.+++... +.+++..+..++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++....... .
T Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~di~p~nili~~~-~~~~l~dfg~~~~~~~~~~~  162 (266)
T cd05033          86 YMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN--YVHRDLAARNILVNSN-LVCKVSDFGLSRRLEDSEAT  162 (266)
T ss_pred             cCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCC-CCEEECccchhhcccccccc
Confidence            57899999999764 47999999999999999999999988  9999999999999886 789999999998764211 1


Q ss_pred             c--ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 A--HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 ~--~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      .  ....+++.|+|||.+. ..++.++||||||+++|+|++ |..||.... ..++.+.+..+... ..+...+..+.++
T Consensus       163 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~l~~l  240 (266)
T cd05033         163 YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS-NQDVIKAVEDGYRL-PPPMDCPSALYQL  240 (266)
T ss_pred             eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHHcCCCC-CCCCCCCHHHHHH
Confidence            1  1233567899999876 458899999999999999998 999997643 45566666655332 2334557899999


Q ss_pred             HHHhhh-CcCCCCCHHHHhcC
Q 010730          155 VGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~h  174 (502)
                      +.+||. +|.+||++.+++++
T Consensus       241 i~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         241 MLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HHHHcCCCcccCcCHHHHHHH
Confidence            999998 99999999999875


No 323
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk 
Probab=99.93  E-value=3.6e-25  Score=214.98  Aligned_cols=167  Identities=23%  Similarity=0.379  Sum_probs=137.9

Q ss_pred             CCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKYT--RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~--~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++.+..  .+++..++.++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++........
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~Nili~~~-~~~~l~d~g~~~~~~~~~~  157 (256)
T cd05039          81 YMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN--FVHRDLAARNVLVSED-LVAKVSDFGLAKEASQGQD  157 (256)
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccchhcccceEEEeCC-CCEEEcccccccccccccc
Confidence            467899999998765  7999999999999999999999998  9999999999999876 7899999999987633221


Q ss_pred             cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVG  156 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~  156 (502)
                        ...++..|+|||++. +.++.++||||||+++|+|++ |..||.. .....+...+..+..+ ..+...++.+.++|.
T Consensus       158 --~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~  233 (256)
T cd05039         158 --SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR-IPLKDVVPHVEKGYRM-EAPEGCPPEVYKVMK  233 (256)
T ss_pred             --cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCC-CCHHHHHHHHhcCCCC-CCccCCCHHHHHHHH
Confidence              334566899999775 558889999999999999997 9999976 4556666666554332 233445789999999


Q ss_pred             Hhhh-CcCCCCCHHHHhcC
Q 010730          157 KCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       157 kcL~-dP~kRpSa~ELL~h  174 (502)
                      +||. +|.+||++.++++.
T Consensus       234 ~~l~~~p~~Rp~~~~l~~~  252 (256)
T cd05039         234 DCWELDPAKRPTFKQLREQ  252 (256)
T ss_pred             HHhccChhhCcCHHHHHHH
Confidence            9998 99999999999863


No 324
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.93  E-value=2.8e-25  Score=227.98  Aligned_cols=172  Identities=29%  Similarity=0.408  Sum_probs=135.9

Q ss_pred             CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCccc
Q 010730            2 FTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS   81 (502)
Q Consensus         2 ~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s   81 (502)
                      +.|++|.++++. +.+++..++.++.||+.||+|||+++  |+||||||+||+++.+ +.+||+|||++.....  ....
T Consensus       103 ~~~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~-~~~kl~dfg~~~~~~~--~~~~  176 (345)
T cd07877         103 LMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGLARHTDD--EMTG  176 (345)
T ss_pred             hcccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEcCC-CCEEEecccccccccc--cccc
Confidence            357899888865 46999999999999999999999998  9999999999999887 7999999999876432  2344


Q ss_pred             ccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcC----------------------
Q 010730           82 VIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSG----------------------  137 (502)
Q Consensus        82 ~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g----------------------  137 (502)
                      ..|++.|+|||++.+  .++.++|||||||++|+|++|..||...... ..+..+...                      
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (345)
T cd07877         177 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLKKISSESARNYIQ  255 (345)
T ss_pred             cccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHhhcccHhHHHHHH
Confidence            678999999998754  4788999999999999999999999763332 222221110                      


Q ss_pred             ---CCC----CcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          138 ---KLP----GAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       138 ---~~p----~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                         ..+    .......++.+++||.+||. +|.+|+++.++|.||||+..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~  306 (345)
T cd07877         256 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  306 (345)
T ss_pred             HhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhc
Confidence               000    00111246789999999998 99999999999999999753


No 325
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.93  E-value=8.6e-26  Score=255.20  Aligned_cols=173  Identities=34%  Similarity=0.588  Sum_probs=142.1

Q ss_pred             CCCCCcHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc-----
Q 010730            1 MFTSGTLREYRKKYTRV-DIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR-----   74 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L-~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~-----   74 (502)
                      ||..-+|++++..+... ....++.+++||++||.|+|++|  ||||||||.|||++.+ +.|||+|||+|+...     
T Consensus       677 yCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~g--iIHRDLKP~NIFLd~~-~~VKIGDFGLAt~~~~~~~~  753 (1351)
T KOG1035|consen  677 YCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQG--IIHRDLKPRNIFLDSR-NSVKIGDFGLATDLKENLES  753 (1351)
T ss_pred             hhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCc--eeeccCCcceeEEcCC-CCeeecccccchhhhhhhhh
Confidence            45555677777665544 57789999999999999999999  9999999999999977 689999999997621     


Q ss_pred             --------------CCCCcccccCCCcccCcccccc----CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc
Q 010730           75 --------------GSQQAHSVIGTPEFMAPELYEE----DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS  136 (502)
Q Consensus        75 --------------~~~~~~s~vGTp~Y~APEvl~~----~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~  136 (502)
                                    .....++.+||.-|+|||++.+    .|+.++||||||||++||+   +||........+...+..
T Consensus       754 ~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~iL~~LR~  830 (1351)
T KOG1035|consen  754 IDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEML---YPFGTSMERASILTNLRK  830 (1351)
T ss_pred             HhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHh---ccCCchHHHHHHHHhccc
Confidence                          0112356799999999999852    5999999999999999996   468766667788888888


Q ss_pred             CCCCCc--ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          137 GKLPGA--FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       137 g~~p~~--~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                      +.+|..  +....-+.-..+|..||. ||.+||||.|||++.||.+
T Consensus       831 g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp  876 (1351)
T KOG1035|consen  831 GSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP  876 (1351)
T ss_pred             CCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence            888755  333345677889999999 9999999999999999863


No 326
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.93  E-value=3.9e-25  Score=218.53  Aligned_cols=168  Identities=24%  Similarity=0.392  Sum_probs=130.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC--
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ--   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~--   78 (502)
                      |+.+|+|.+++.+. .+++..++.++.||+.||.|||+++  |+||||||+|||++.+ +.+||+|||++..+.....  
T Consensus        89 ~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~--i~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~~~~~~~  164 (283)
T cd05080          89 YVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQH--YIHRDLAARNVLLDND-RLVKIGDFGLAKAVPEGHEYY  164 (283)
T ss_pred             CCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCC--eeccccChheEEEcCC-CcEEEeecccccccCCcchhh
Confidence            57889999999774 5999999999999999999999998  9999999999999876 7899999999986643222  


Q ss_pred             --cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCCh-H-------------HHHHHhhcCCCCC
Q 010730           79 --AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNP-A-------------QIYKKVTSGKLPG  141 (502)
Q Consensus        79 --~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~-~-------------ql~~kI~~g~~p~  141 (502)
                        .....++..|+|||++. ..++.++|||||||++|+|+||..||...... .             .+.+.+..+.. .
T Consensus       165 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  243 (283)
T cd05080         165 RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR-L  243 (283)
T ss_pred             ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC-C
Confidence              12234567799999875 45889999999999999999999998542211 0             11111111111 1


Q ss_pred             cccccccHHHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          142 AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       142 ~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      ..+...+..+++++.+||. +|.+|||+++++.
T Consensus       244 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         244 PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            1233456899999999999 9999999999986


No 327
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.93  E-value=4.3e-25  Score=213.44  Aligned_cols=169  Identities=22%  Similarity=0.393  Sum_probs=135.5

Q ss_pred             CCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.|++|.+++.+ ...+++..+..++.|++.+|.|||+++  ++||||||+||+++.+ +.+||+|||++.........
T Consensus        73 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~--i~h~di~p~nili~~~-~~~~l~d~g~~~~~~~~~~~  149 (251)
T cd05041          73 LVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN--CIHRDLAARNCLVGEN-NVLKISDFGMSREEEGGIYT  149 (251)
T ss_pred             cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--EehhhcCcceEEEcCC-CcEEEeeccccccccCCcce
Confidence            5679999999966 456899999999999999999999998  9999999999999876 79999999999765421111


Q ss_pred             ---ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           80 ---HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        80 ---~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                         ....++..|+|||++. +.++.++|+|||||++|+|+| |..||... ........+..+.. ...+...+..+.++
T Consensus       150 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~l  227 (251)
T cd05041         150 VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGM-SNQQTRERIESGYR-MPAPQLCPEEIYRL  227 (251)
T ss_pred             eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccC-CHHHHHHHHhcCCC-CCCCccCCHHHHHH
Confidence               1123456799999775 458899999999999999999 88898763 44555555554422 22344557899999


Q ss_pred             HHHhhh-CcCCCCCHHHHhcC
Q 010730          155 VGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~h  174 (502)
                      |.+||. +|.+||++.|+|+.
T Consensus       228 i~~~l~~~p~~Rp~~~ell~~  248 (251)
T cd05041         228 MLQCWAYDPENRPSFSEIYNE  248 (251)
T ss_pred             HHHHhccChhhCcCHHHHHHH
Confidence            999998 99999999999874


No 328
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.93  E-value=2.6e-25  Score=226.45  Aligned_cols=173  Identities=28%  Similarity=0.359  Sum_probs=136.3

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC------
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ------   77 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~------   77 (502)
                      .++|.+++.+. .+++..++.++.||+.||.|||+.+  |+||||||+||+++.+ +.+||+|||++..+....      
T Consensus        92 ~~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~--i~H~dl~p~nill~~~-~~~kl~d~g~~~~~~~~~~~~~~~  167 (337)
T cd07852          92 ETDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGN--VIHRDLKPSNILLNSD-CRVKLADFGLARSLSELEENPENP  167 (337)
T ss_pred             ccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCC-CcEEEeeccchhccccccccccCc
Confidence            46899999775 7899999999999999999999988  9999999999999887 799999999997654321      


Q ss_pred             CcccccCCCcccCccccc--cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcC------------------
Q 010730           78 QAHSVIGTPEFMAPELYE--EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSG------------------  137 (502)
Q Consensus        78 ~~~s~vGTp~Y~APEvl~--~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g------------------  137 (502)
                      .....+||+.|+|||++.  ..++.++||||||+++|+|++|+.||..........+.+...                  
T Consensus       168 ~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (337)
T cd07852         168 VLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAAT  247 (337)
T ss_pred             chhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHH
Confidence            223467899999999774  347889999999999999999999997644433322111110                  


Q ss_pred             --------CCC--CcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          138 --------KLP--GAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       138 --------~~p--~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                              ...  .......+.++.++|.+||. +|.+|||+.++|.|||++.-
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         248 MLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             hhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence                    000  01111246789999999999 99999999999999999753


No 329
>PF07714 Pkinase_Tyr:  Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain;  InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []:   Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction [].      Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases [].  ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.93  E-value=1.2e-25  Score=220.93  Aligned_cols=168  Identities=27%  Similarity=0.513  Sum_probs=136.2

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++...  ..++...+..|+.||+.||.|||+.+  |+|++|++.|||++.+ +.+||+|||++........
T Consensus        82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~--iiH~~l~~~nill~~~-~~~Kl~~f~~~~~~~~~~~  158 (259)
T PF07714_consen   82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN--IIHGNLSPSNILLDSN-GQVKLSDFGLSRPISEKSK  158 (259)
T ss_dssp             --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT--EEEST-SGGGEEEETT-TEEEEESTTTGEETTTSSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccc-ccccccccccccccccccc
Confidence            57889999999886  77999999999999999999999998  9999999999999987 6999999999987632221


Q ss_pred             ---cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHH
Q 010730           79 ---AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARR  153 (502)
Q Consensus        79 ---~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~  153 (502)
                         .....+...|+|||++.. .++.++||||||+++|||++ |..||.+. +..++..++..+..+ ..+...+..+.+
T Consensus       159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~  236 (259)
T PF07714_consen  159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY-DNEEIIEKLKQGQRL-PIPDNCPKDIYS  236 (259)
T ss_dssp             EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS-CHHHHHHHHHTTEET-TSBTTSBHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccc-eeccchhHHHHH
Confidence               233456788999998864 48999999999999999999 78999775 667777777666543 344556788999


Q ss_pred             HHHHhhh-CcCCCCCHHHHhc
Q 010730          154 FVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      +|.+||. +|.+||++.+|++
T Consensus       237 li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  237 LIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             HHHHHT-SSGGGS--HHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHh
Confidence            9999998 9999999999975


No 330
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity 
Probab=99.93  E-value=4.2e-25  Score=215.78  Aligned_cols=165  Identities=18%  Similarity=0.305  Sum_probs=129.2

Q ss_pred             CCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCC-------cEEEEecCCcee
Q 010730            1 MFTSGTLREYRKKYT-RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLG-------QIKIGDLGLAAI   72 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~-~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g-------~vKL~DFGlA~~   72 (502)
                      |+.+|+|.+++.+.+ .+++..++.++.||+.||+|||+.+  |+||||||+||+++.+..       .+|++|||++..
T Consensus        80 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078          80 YVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKG--LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             cCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCccceEEEecccccccCCCceEEecccccccc
Confidence            578999999997654 5899999999999999999999998  999999999999976522       379999999865


Q ss_pred             ccCCCCcccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhcc-CCCCCCCChHHHHHHhhcCCCCCcccccccH
Q 010730           73 LRGSQQAHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSE-YPYSECSNPAQIYKKVTSGKLPGAFHRIQDA  149 (502)
Q Consensus        73 ~~~~~~~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~-~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~  149 (502)
                      ...   .....+++.|+|||++.+  .++.++|||||||++|+|++|. .||.. ........... ...  .++...+.
T Consensus       158 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~-~~~~~~~~~~~-~~~--~~~~~~~~  230 (258)
T cd05078         158 VLP---KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSA-LDSQKKLQFYE-DRH--QLPAPKWT  230 (258)
T ss_pred             cCC---chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhh-ccHHHHHHHHH-ccc--cCCCCCcH
Confidence            432   233568899999998864  4788999999999999999984 66654 33322222221 111  22333457


Q ss_pred             HHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          150 EARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       150 ~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      ++.++|.+||. +|.+|||++++++.
T Consensus       231 ~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         231 ELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHHh
Confidence            89999999999 99999999999875


No 331
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.93  E-value=5.5e-25  Score=222.47  Aligned_cols=171  Identities=29%  Similarity=0.486  Sum_probs=138.8

Q ss_pred             CCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccc
Q 010730            4 SGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSV   82 (502)
Q Consensus         4 gGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~   82 (502)
                      .|+|.+++.. ..++++..+..++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||++.....   ....
T Consensus       108 ~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--i~H~dL~p~Nil~~~~-~~~kl~dfg~~~~~~~---~~~~  181 (317)
T cd06635         108 LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTEP-GQVKLADFGSASIASP---ANSF  181 (317)
T ss_pred             CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcccEEECCC-CCEEEecCCCccccCC---cccc
Confidence            4688887754 456999999999999999999999998  9999999999999876 7999999999865432   2345


Q ss_pred             cCCCcccCccccc----cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHh
Q 010730           83 IGTPEFMAPELYE----EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC  158 (502)
Q Consensus        83 vGTp~Y~APEvl~----~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kc  158 (502)
                      .|++.|+|||++.    +.++.++|||||||++|+|++|..||........ ...+..+..+.......+..++++|.+|
T Consensus       182 ~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~  260 (317)
T cd06635         182 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQNESPTLQSNEWSDYFRNFVDSC  260 (317)
T ss_pred             cCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHhccCCCCCCccccHHHHHHHHHH
Confidence            7899999999763    4588899999999999999999999977433333 3444444333333344577899999999


Q ss_pred             hh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          159 LE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       159 L~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                      |. +|.+||++.+++.|+|+....
T Consensus       261 l~~~p~~Rpt~~~il~~~~~~~~~  284 (317)
T cd06635         261 LQKIPQDRPTSEELLKHMFVLRER  284 (317)
T ss_pred             ccCCcccCcCHHHHHhChhhhccC
Confidence            98 999999999999999996543


No 332
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.93  E-value=6.8e-26  Score=250.45  Aligned_cols=168  Identities=23%  Similarity=0.361  Sum_probs=137.9

Q ss_pred             CCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-
Q 010730            1 MFTSGTLREYRKK--YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k--~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-   77 (502)
                      ||.||.|.+|+.+  ..+|++.+|++|+.|+++|+.+||...+||||||||-||||++.+ |..||||||-|...-... 
T Consensus       123 yC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~-g~~KLCDFGSatt~~~~~~  201 (738)
T KOG1989|consen  123 YCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSAD-GNYKLCDFGSATTKILSPT  201 (738)
T ss_pred             hccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCC-CCEEeCcccccccccCCCc
Confidence            6788999999974  456999999999999999999999999999999999999999987 799999999986422111 


Q ss_pred             Cc---------ccccCCCcccCccccc---c-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCccc
Q 010730           78 QA---------HSVIGTPEFMAPELYE---E-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFH  144 (502)
Q Consensus        78 ~~---------~s~vGTp~Y~APEvl~---~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~  144 (502)
                      ..         -...-||.|.|||++.   + ..++|+|||+|||+||-|+....||.+...     -.|..+.+..+..
T Consensus       202 ~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~-----laIlng~Y~~P~~  276 (738)
T KOG1989|consen  202 SAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK-----LAILNGNYSFPPF  276 (738)
T ss_pred             cHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-----eeEEeccccCCCC
Confidence            11         0123699999999874   2 379999999999999999999999976322     2455666644444


Q ss_pred             ccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          145 RIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       145 ~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      ...+..+++||..||+ +|.+||.+-+++.+
T Consensus       277 p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  277 PNYSDRLKDLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             ccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence            4568899999999999 99999999888864


No 333
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.93  E-value=3.9e-25  Score=219.61  Aligned_cols=169  Identities=23%  Similarity=0.371  Sum_probs=136.8

Q ss_pred             CCCCCcHHHHHHhC------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEe
Q 010730            1 MFTSGTLREYRKKY------------------------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVN   56 (502)
Q Consensus         1 ~~tgGsL~~yi~k~------------------------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~   56 (502)
                      |+.+|+|.+|+...                        .++++..+..++.||+.||.|||+++  |+||||||+|||++
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--ivH~dikp~nill~  161 (290)
T cd05045          84 YAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK--LVHRDLAARNVLVA  161 (290)
T ss_pred             ecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC--eehhhhhhheEEEc
Confidence            56789999998653                        34788999999999999999999988  99999999999998


Q ss_pred             CCCCcEEEEecCCceeccCCCC---cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHH
Q 010730           57 GHLGQIKIGDLGLAAILRGSQQ---AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIY  131 (502)
Q Consensus        57 ~~~g~vKL~DFGlA~~~~~~~~---~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~  131 (502)
                      .+ +.+||+|||++..+.....   .....++..|+|||++. ..++.++||||||+++|+|++ |..||.+ ..+.+++
T Consensus       162 ~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~-~~~~~~~  239 (290)
T cd05045         162 EG-RKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG-IAPERLF  239 (290)
T ss_pred             CC-CcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC-CCHHHHH
Confidence            76 7999999999976532211   12234567899999765 458899999999999999999 9999976 5667777


Q ss_pred             HHhhcCCCCCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          132 KKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       132 ~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      ..+..+..+ ..+...+.++.+|+.+||. +|.+||++++++..
T Consensus       240 ~~~~~~~~~-~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~  282 (290)
T cd05045         240 NLLKTGYRM-ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKE  282 (290)
T ss_pred             HHHhCCCCC-CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence            766654332 2334457899999999998 99999999999863


No 334
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.93  E-value=3.7e-25  Score=217.11  Aligned_cols=170  Identities=21%  Similarity=0.374  Sum_probs=140.1

Q ss_pred             CCCCCcHHHHHHhCC---------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730            1 MFTSGTLREYRKKYT---------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~---------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      |+.+|+|.+++....         .+++..+..++.||+.||+|||+.+  |+||||||+||+++.+ +.++++|||++.
T Consensus        89 ~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dlkp~Nili~~~-~~~~l~~~~~~~  165 (275)
T cd05046          89 YTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR--FVHRDLAARNCLVSSQ-REVKVSLLSLSK  165 (275)
T ss_pred             ecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC--cccCcCccceEEEeCC-CcEEEccccccc
Confidence            467899999998766         7999999999999999999999998  9999999999999876 789999999986


Q ss_pred             eccCC--CCcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccc
Q 010730           72 ILRGS--QQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQ  147 (502)
Q Consensus        72 ~~~~~--~~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~  147 (502)
                      .....  .......+++.|+|||.+. ..++.++||||||+++|+|++ |..||.. .....++..+..+..+.......
T Consensus       166 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~  244 (275)
T cd05046         166 DVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYG-LSDEEVLNRLQAGKLELPVPEGC  244 (275)
T ss_pred             ccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccc-cchHHHHHHHHcCCcCCCCCCCC
Confidence            54321  1223456788899999765 457889999999999999999 8899965 34456666666665544444456


Q ss_pred             cHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          148 DAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       148 s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      +..+.++|.+||. +|.+||++.|++..
T Consensus       245 ~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         245 PSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            7899999999998 99999999999875


No 335
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.93  E-value=6.7e-25  Score=215.09  Aligned_cols=169  Identities=24%  Similarity=0.428  Sum_probs=136.7

Q ss_pred             CCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKYT-RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~-~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++.+.+ .+++..++.++.||+.||+|||+++  ++||||||+||+++.+ +.+||+|||++.........
T Consensus        87 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~~H~dl~p~nili~~~-~~~~l~d~g~~~~~~~~~~~  163 (270)
T cd05056          87 LAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR--FVHRDIAARNVLVSSP-DCVKLGDFGLSRYLEDESYY  163 (270)
T ss_pred             cCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccChheEEEecC-CCeEEccCceeeecccccce
Confidence            567999999998754 5899999999999999999999988  9999999999999886 79999999999876443221


Q ss_pred             --ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHH
Q 010730           80 --HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFV  155 (502)
Q Consensus        80 --~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI  155 (502)
                        ....+++.|+|||++. ..++.++|||||||++|+|++ |..||..... .+....+..+..+ ..+...+..++++|
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~li  241 (270)
T cd05056         164 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN-NDVIGRIENGERL-PMPPNCPPTLYSLM  241 (270)
T ss_pred             ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHcCCcC-CCCCCCCHHHHHHH
Confidence              1223456899999775 458899999999999999996 9999977544 4444555555433 23344578999999


Q ss_pred             HHhhh-CcCCCCCHHHHhcC
Q 010730          156 GKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .+||. +|.+|||+.+++..
T Consensus       242 ~~~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         242 TKCWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             HHHcCCChhhCcCHHHHHHH
Confidence            99998 99999999998874


No 336
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.93  E-value=5.9e-25  Score=213.60  Aligned_cols=167  Identities=22%  Similarity=0.381  Sum_probs=136.8

Q ss_pred             CCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKYT--RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~--~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++....  .+++..+..++.||+.||.|||+.+  ++||||||+||+++.+ +.+||+|||++......  
T Consensus        79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--~~H~dl~p~nili~~~-~~~kl~Dfg~~~~~~~~--  153 (254)
T cd05083          79 LMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK--LVHRDLAARNILVSED-GVAKVSDFGLARVGSMG--  153 (254)
T ss_pred             CCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcCC-CcEEECCCccceecccc--
Confidence            578999999997653  5899999999999999999999988  9999999999999876 78999999998764322  


Q ss_pred             cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVG  156 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~  156 (502)
                      ......+..|+|||.+. +.++.++|+|||||++|+|++ |..||.. .....+...+..+..+. .....+..+.+++.
T Consensus       154 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~  231 (254)
T cd05083         154 VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPK-MSLKEVKECVEKGYRME-PPEGCPADVYVLMT  231 (254)
T ss_pred             CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCcc-CCHHHHHHHHhCCCCCC-CCCcCCHHHHHHHH
Confidence            12234567899999775 458899999999999999998 9999976 44555666666554332 23445788999999


Q ss_pred             Hhhh-CcCCCCCHHHHhcC
Q 010730          157 KCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       157 kcL~-dP~kRpSa~ELL~h  174 (502)
                      +||. +|.+||++++++..
T Consensus       232 ~~l~~~p~~Rp~~~~l~~~  250 (254)
T cd05083         232 SCWETEPKKRPSFHKLREK  250 (254)
T ss_pred             HHcCCChhhCcCHHHHHHH
Confidence            9998 99999999999863


No 337
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.93  E-value=6.5e-25  Score=216.53  Aligned_cols=169  Identities=26%  Similarity=0.425  Sum_probs=139.3

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++.+. ..+++..+..|+.||+.||+|||+++  |+||||||+||+++.+ +.+||+|||+++.+......
T Consensus        89 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--i~H~di~p~nil~~~~-~~~kL~dfg~~~~~~~~~~~  165 (279)
T cd05057          89 LMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLLDVDEKE  165 (279)
T ss_pred             cCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--EEecccCcceEEEcCC-CeEEECCCcccccccCcccc
Confidence            56899999999874 46999999999999999999999988  9999999999999876 68999999999876533221


Q ss_pred             c---cccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           80 H---SVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        80 ~---s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      .   ...++..|+|||.+. ..++.++|+||||+++|+|++ |..||.+ ....++.+.+..+... ..+...+..+.++
T Consensus       166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  243 (279)
T cd05057         166 YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEG-IPAVEIPDLLEKGERL-PQPPICTIDVYMV  243 (279)
T ss_pred             eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCC-CCHHHHHHHHhCCCCC-CCCCCCCHHHHHH
Confidence            1   122356899999775 568899999999999999999 9999976 4566777777765432 3344567889999


Q ss_pred             HHHhhh-CcCCCCCHHHHhcC
Q 010730          155 VGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~h  174 (502)
                      +.+||. +|.+||++.+++.-
T Consensus       244 ~~~~l~~~p~~Rp~~~~l~~~  264 (279)
T cd05057         244 LVKCWMIDAESRPTFKELINE  264 (279)
T ss_pred             HHHHcCCChhhCCCHHHHHHH
Confidence            999998 99999999998763


No 338
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.93  E-value=4.8e-25  Score=221.25  Aligned_cols=169  Identities=26%  Similarity=0.463  Sum_probs=136.4

Q ss_pred             CCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC-
Q 010730            1 MFTSGTLREYRKKYT-RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~-~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~-   78 (502)
                      |+.+|+|.+++...+ .+++..+..++.||+.||.|||+++  |+||||||+||+++.+ +.+||+|||+++.+..... 
T Consensus        89 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dikp~Nill~~~-~~~kL~Dfg~~~~~~~~~~~  165 (303)
T cd05110          89 LMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR--LVHRDLAARNVLVKSP-NHVKITDFGLARLLEGDEKE  165 (303)
T ss_pred             hcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC--eeccccccceeeecCC-CceEEccccccccccCcccc
Confidence            567899999997754 6899999999999999999999998  9999999999999876 6899999999986543222 


Q ss_pred             --cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 --AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 --~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                        .....++..|+|||++. ..++.++|||||||++|+|++ |..||.+ ....++.+.+..+..+ ..+...+..+.++
T Consensus       166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  243 (303)
T cd05110         166 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG-IPTREIPDLLEKGERL-PQPPICTIDVYMV  243 (303)
T ss_pred             cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHCCCCC-CCCCCCCHHHHHH
Confidence              12234577899999876 458899999999999999997 8999965 3344455545444332 2334567889999


Q ss_pred             HHHhhh-CcCCCCCHHHHhcC
Q 010730          155 VGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~h  174 (502)
                      +.+||. +|.+||+++++++.
T Consensus       244 i~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         244 MVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             HHHHcCCChhhCcCHHHHHHH
Confidence            999998 99999999998875


No 339
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93  E-value=5.2e-25  Score=224.18  Aligned_cols=169  Identities=27%  Similarity=0.418  Sum_probs=137.6

Q ss_pred             CCCCCcHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEE
Q 010730            1 MFTSGTLREYRKKYT----------------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKI   64 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~----------------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL   64 (502)
                      |+.+|+|.+++.+..                .++...+..++.||+.||.|||.++  |+||||||+|||++.+ +.+||
T Consensus        99 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--ivH~dlkp~Nill~~~-~~~kL  175 (334)
T cd05100          99 YASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK--CIHRDLAARNVLVTED-NVMKI  175 (334)
T ss_pred             cCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccccceEEEcCC-CcEEE
Confidence            567899999997642                3778889999999999999999998  9999999999999877 79999


Q ss_pred             EecCCceeccCCCC---cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCC
Q 010730           65 GDLGLAAILRGSQQ---AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKL  139 (502)
Q Consensus        65 ~DFGlA~~~~~~~~---~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~  139 (502)
                      +|||+++.+.....   .....++..|+|||++. ..++.++|||||||++|+|++ |..||.+ .+..++++.+..+..
T Consensus       176 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~-~~~~~~~~~~~~~~~  254 (334)
T cd05100         176 ADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG-IPVEELFKLLKEGHR  254 (334)
T ss_pred             CCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCC-CCHHHHHHHHHcCCC
Confidence            99999976543221   12233457899999875 458899999999999999998 8899976 456777777766544


Q ss_pred             CCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          140 PGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       140 p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      + ..+...+.++.++|.+||. +|.+||++.|++.+
T Consensus       255 ~-~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         255 M-DKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             C-CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            3 2333456789999999998 99999999999986


No 340
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It 
Probab=99.93  E-value=5.8e-25  Score=216.66  Aligned_cols=168  Identities=24%  Similarity=0.347  Sum_probs=137.4

Q ss_pred             CCCCCcHHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCcee
Q 010730            1 MFTSGTLREYRKKY--------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI   72 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~   72 (502)
                      |+.+|+|.+|+...        ..+++..+..++.||+.||+|||+++  ++||||||+||+++.+ +.+||+|||+++.
T Consensus        90 ~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~p~nil~~~~-~~~kl~d~g~~~~  166 (280)
T cd05043          90 YMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG--VIHKDIAARNCVIDEE-LQVKITDNALSRD  166 (280)
T ss_pred             cCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccCHhhEEEcCC-CcEEECCCCCccc
Confidence            45689999999764        45889999999999999999999998  9999999999999876 7999999999976


Q ss_pred             ccCCCC---cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccc
Q 010730           73 LRGSQQ---AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQ  147 (502)
Q Consensus        73 ~~~~~~---~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~  147 (502)
                      +.....   .....++..|+|||++.. .++.++|||||||++|+|++ |..||.. .++.++...+..+..+ ......
T Consensus       167 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~  244 (280)
T cd05043         167 LFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVE-IDPFEMAAYLKDGYRL-AQPINC  244 (280)
T ss_pred             ccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCc-CCHHHHHHHHHcCCCC-CCCCcC
Confidence            533221   122345778999998754 48899999999999999999 9999976 4666777766655432 223345


Q ss_pred             cHHHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          148 DAEARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       148 s~~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      +..+.+++.+||. +|.+|||+.+++.
T Consensus       245 ~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         245 PDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            7889999999998 9999999999986


No 341
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.92  E-value=6.3e-25  Score=212.90  Aligned_cols=169  Identities=21%  Similarity=0.423  Sum_probs=138.1

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC-
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~-   78 (502)
                      |+.+|+|.+++... +.++++.++.++.||+.+|+|||+.+  ++||||||+||+++.+ +.+||+|||++........ 
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~h~dl~p~ni~i~~~-~~~~l~d~g~~~~~~~~~~~  156 (256)
T cd05112          80 FMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN--VIHRDLAARNCLVGEN-QVVKVSDFGMTRFVLDDQYT  156 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccccceEEEcCC-CeEEECCCcceeecccCccc
Confidence            57899999999764 56899999999999999999999998  9999999999999876 7899999999876533211 


Q ss_pred             -cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHH
Q 010730           79 -AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFV  155 (502)
Q Consensus        79 -~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI  155 (502)
                       .....++..|+|||++. +.++.++||||||+++|+|++ |..||.. .....+.+.+..+..+ ..+...+..+.+|+
T Consensus       157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~  234 (256)
T cd05112         157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYEN-RSNSEVVETINAGFRL-YKPRLASQSVYELM  234 (256)
T ss_pred             ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCc-CCHHHHHHHHhCCCCC-CCCCCCCHHHHHHH
Confidence             11233567899999876 458889999999999999998 9999976 4556667666655332 23345678999999


Q ss_pred             HHhhh-CcCCCCCHHHHhcC
Q 010730          156 GKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .+||. +|.+||++.++++.
T Consensus       235 ~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         235 QHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             HHHcccChhhCCCHHHHHHh
Confidence            99998 99999999999874


No 342
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.92  E-value=4.6e-25  Score=225.81  Aligned_cols=169  Identities=31%  Similarity=0.422  Sum_probs=131.6

Q ss_pred             CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccccC
Q 010730            5 GTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIG   84 (502)
Q Consensus         5 GsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~vG   84 (502)
                      ++|..++.  ..+++..++.++.||+.||+|||.++  |+||||||+||+++.+ +.+||+|||+++....  ......|
T Consensus       104 ~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dlkp~NIll~~~-~~~kL~dfg~~~~~~~--~~~~~~~  176 (342)
T cd07879         104 TDLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAG--IIHRDLKPGNLAVNED-CELKILDFGLARHADA--EMTGYVV  176 (342)
T ss_pred             cCHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEEeeCCCCcCCCC--CCCCcee
Confidence            35666552  46899999999999999999999998  9999999999999986 7999999999875432  2234578


Q ss_pred             CCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc-CCC---------------------C
Q 010730           85 TPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS-GKL---------------------P  140 (502)
Q Consensus        85 Tp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~-g~~---------------------p  140 (502)
                      ++.|+|||++.+  .++.++|||||||++|+|++|+.||.+...... +..+.. ...                     +
T Consensus       177 ~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (342)
T cd07879         177 TRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQILKVTGVPGPEFVQKLEDKAAKSYIKSLP  255 (342)
T ss_pred             eecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHHhcccchHHHHhhcC
Confidence            999999998754  488899999999999999999999976432222 222211 000                     0


Q ss_pred             C----c---ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          141 G----A---FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       141 ~----~---~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                      .    .   .....+..+.+||.+||. +|.+||++.++|.||||....
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         256 KYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             CcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence            0    0   011245678999999998 999999999999999997643


No 343
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.92  E-value=8.4e-25  Score=213.24  Aligned_cols=168  Identities=23%  Similarity=0.378  Sum_probs=136.9

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++.+.  ..++...+..++.||+.||+|||+++  ++||||||+||+++.+ +.++|+|||++........
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~~~~  157 (260)
T cd05067          81 YMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN--YIHRDLRAANILVSET-LCCKIADFGLARLIEDNEY  157 (260)
T ss_pred             cCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecccccHHhEEEcCC-CCEEEccCcceeecCCCCc
Confidence            56799999998753  46899999999999999999999988  9999999999999876 7899999999977652221


Q ss_pred             --cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 --AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 --~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                        .....++..|+|||++. ..++.++||||||+++|+|++ |..||.+. +..++.+.+..+..+ ..+...+.+++++
T Consensus       158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  235 (260)
T cd05067         158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGM-TNPEVIQNLERGYRM-PRPDNCPEELYEL  235 (260)
T ss_pred             ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCC-ChHHHHHHHHcCCCC-CCCCCCCHHHHHH
Confidence              12344677899999875 458889999999999999999 99999764 445556666554332 2334456789999


Q ss_pred             HHHhhh-CcCCCCCHHHHhc
Q 010730          155 VGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~  173 (502)
                      |.+||. +|.+||++++++.
T Consensus       236 i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         236 MRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             HHHHccCChhhCCCHHHHHH
Confidence            999998 9999999999876


No 344
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.92  E-value=5.1e-25  Score=219.02  Aligned_cols=170  Identities=27%  Similarity=0.441  Sum_probs=132.6

Q ss_pred             CCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC--Ccc
Q 010730            4 SGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ--QAH   80 (502)
Q Consensus         4 gGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~--~~~   80 (502)
                      +|+|..++.+. ..+++..++.++.||+.||.|||+.+  |+||||||+||+++.+ +.+||+|||++..+....  ...
T Consensus        99 ~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~~-~~~kl~dfg~~~~~~~~~~~~~~  175 (302)
T cd07864          99 DHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN--FLHRDIKCSNILLNNK-GQIKLADFGLARLYNSEESRPYT  175 (302)
T ss_pred             CccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC-CcEEeCcccccccccCCcccccc
Confidence            45777777653 56999999999999999999999998  9999999999999887 799999999997654322  112


Q ss_pred             cccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhc---CCCCCc-------------
Q 010730           81 SVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTS---GKLPGA-------------  142 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~---g~~p~~-------------  142 (502)
                      ...+++.|+|||++.+  .++.++|||||||++|+|++|.+||........ +..+..   +..+..             
T Consensus       176 ~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (302)
T cd07864         176 NKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQ-LELISRLCGSPCPAVWPDVIKLPYFNTM  254 (302)
T ss_pred             cceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChhhccccccccccccc
Confidence            2456889999998753  378899999999999999999999976433222 222211   111111             


Q ss_pred             ------------ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          143 ------------FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       143 ------------~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                                  .....+..++++|.+||. +|.+||++.+++.||||
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         255 KPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             ccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence                        011246889999999999 99999999999999997


No 345
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.92  E-value=4.3e-25  Score=226.39  Aligned_cols=171  Identities=27%  Similarity=0.383  Sum_probs=136.2

Q ss_pred             CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccc
Q 010730            3 TSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSV   82 (502)
Q Consensus         3 tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~   82 (502)
                      .|++|.+++.. ..+++..++.++.||+.||+|||.++  |+||||||+||+++.+ +.+||+|||++.....  .....
T Consensus       102 ~~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~g--i~H~dlkp~Nill~~~-~~~kl~dfg~~~~~~~--~~~~~  175 (343)
T cd07880         102 MGTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAG--IIHRDLKPGNLAVNED-CELKILDFGLARQTDS--EMTGY  175 (343)
T ss_pred             CCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCC-CCEEEeeccccccccc--Ccccc
Confidence            37889888864 57999999999999999999999998  9999999999999876 7899999999976533  22345


Q ss_pred             cCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC---------------------
Q 010730           83 IGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL---------------------  139 (502)
Q Consensus        83 vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~---------------------  139 (502)
                      .+++.|+|||++.+  .++.++|+|||||++|+|++|..||.+...... +.++.....                     
T Consensus       176 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (343)
T cd07880         176 VVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ-LMEIMKVTGTPSKEFVQKLQSEDAKNYVKK  254 (343)
T ss_pred             ccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHhhcchhHHHHHHh
Confidence            68999999998764  478899999999999999999999976443322 222211000                     


Q ss_pred             -C-------CcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          140 -P-------GAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       140 -p-------~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                       +       ..+....++.+.++|.+||. +|.+|||+.+++.||||+..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         255 LPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF  304 (343)
T ss_pred             ccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence             0       00112346778999999999 99999999999999999754


No 346
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.92  E-value=8.7e-25  Score=213.45  Aligned_cols=168  Identities=25%  Similarity=0.419  Sum_probs=135.1

Q ss_pred             CCCCCcHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCC-----cEEEEecC
Q 010730            1 MFTSGTLREYRKKY-------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLG-----QIKIGDLG   68 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g-----~vKL~DFG   68 (502)
                      |+.+|+|.+++.+.       ..+++..+..++.||+.||.|||+.+  ++|+||||+||+++.+ +     .+||+|||
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~~-~~~~~~~~~l~dfg  156 (269)
T cd05044          80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH--FIHRDLAARNCLVSEK-GYDADRVVKIGDFG  156 (269)
T ss_pred             ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC--cccCCCChheEEEecC-CCCCCcceEECCcc
Confidence            56789999999743       34788999999999999999999988  9999999999999875 4     79999999


Q ss_pred             CceeccCCC---CcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcc
Q 010730           69 LAAILRGSQ---QAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAF  143 (502)
Q Consensus        69 lA~~~~~~~---~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~  143 (502)
                      +++.+....   ......++..|+|||++. +.++.++|||||||++|+|++ |..||.. .+..++...+..+..+ ..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~-~~~~~~~~~~~~~~~~-~~  234 (269)
T cd05044         157 LARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPA-LNNQEVLQHVTAGGRL-QK  234 (269)
T ss_pred             cccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcc-cCHHHHHHHHhcCCcc-CC
Confidence            987653221   112335678899999775 458999999999999999998 9999976 4445566666554332 23


Q ss_pred             cccccHHHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          144 HRIQDAEARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       144 ~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      +...+..+.++|.+||. +|.+||++++++.
T Consensus       235 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         235 PENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             cccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            34457889999999998 9999999999876


No 347
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.92  E-value=2.8e-25  Score=222.32  Aligned_cols=177  Identities=33%  Similarity=0.492  Sum_probs=134.8

Q ss_pred             CcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCC---CCcEEEEecCCceeccCC
Q 010730            5 GTLREYRKKY-----TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGH---LGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         5 GsL~~yi~k~-----~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~---~g~vKL~DFGlA~~~~~~   76 (502)
                      -+|.+.|+-+     +.++...++.++.|||.|+.|||++.  |+||||||.|||+.++   .|.|||+|||+++.+...
T Consensus       112 hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW--vlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~p  189 (438)
T KOG0666|consen  112 HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW--VLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNP  189 (438)
T ss_pred             hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh--eeeccCCcceEEEeccCCccCeeEeecccHHHHhhcc
Confidence            3566666533     35889999999999999999999999  9999999999999765   378999999999987643


Q ss_pred             C----CcccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCC------CCh---HHH---HHHhhc--
Q 010730           77 Q----QAHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSEC------SNP---AQI---YKKVTS--  136 (502)
Q Consensus        77 ~----~~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~------~~~---~ql---~~kI~~--  136 (502)
                      .    ....++-|.+|.|||++.+  .|+.++||||+|||+.||+|-++.|.+.      .++   .|+   +..+..  
T Consensus       190 lkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt  269 (438)
T KOG0666|consen  190 LKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPT  269 (438)
T ss_pred             ccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCc
Confidence            2    2345788999999998754  4999999999999999999999888542      111   121   111110  


Q ss_pred             -C------CCCCc----------------------ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCCCC
Q 010730          137 -G------KLPGA----------------------FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGE  183 (502)
Q Consensus       137 -g------~~p~~----------------------~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~~~  183 (502)
                       .      ++|..                      ...+.++.+.+|+.+||. ||.+|+|++++|+|+||..+...
T Consensus       270 ~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp  346 (438)
T KOG0666|consen  270 DKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP  346 (438)
T ss_pred             cccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence             0      01111                      011235558899999999 99999999999999999876543


No 348
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.92  E-value=7.9e-25  Score=224.45  Aligned_cols=155  Identities=23%  Similarity=0.368  Sum_probs=125.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC---cccccCCCcccCcc
Q 010730           16 RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ---AHSVIGTPEFMAPE   92 (502)
Q Consensus        16 ~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~---~~s~vGTp~Y~APE   92 (502)
                      .++...+..|+.||+.||+|||+++  |+||||||+||+++.+ +.+||+|||++........   .....+++.|+|||
T Consensus       175 ~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dikp~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  251 (343)
T cd05103         175 VLTLEDLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEN-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE  251 (343)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCccCeEEEcCC-CcEEEEecccccccccCcchhhcCCCCCCcceECcH
Confidence            3678888999999999999999998  9999999999999876 7999999999876532211   12234567899999


Q ss_pred             ccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhhh-CcCCCCCHH
Q 010730           93 LYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAK  169 (502)
Q Consensus        93 vl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~  169 (502)
                      ++. ..++.++||||||+++|+|++ |..||.......++...+..+..+ ..+...++.+.+++..||. +|.+||++.
T Consensus       252 ~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~cl~~~p~~Rps~~  330 (343)
T cd05103         252 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-RAPDYTTPEMYQTMLDCWHGEPSQRPTFS  330 (343)
T ss_pred             HhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCC-CCCCCCCHHHHHHHHHHccCChhhCcCHH
Confidence            775 458999999999999999997 999998755555556555555433 2233457889999999998 999999999


Q ss_pred             HHhcC
Q 010730          170 ELLLD  174 (502)
Q Consensus       170 ELL~h  174 (502)
                      ||++|
T Consensus       331 eil~~  335 (343)
T cd05103         331 ELVEH  335 (343)
T ss_pred             HHHHH
Confidence            99986


No 349
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.92  E-value=1.2e-24  Score=210.16  Aligned_cols=169  Identities=21%  Similarity=0.363  Sum_probs=136.1

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++... ..+++..+..++.||+.+|.|||.++  ++||||||+||+++.+ +.+||+|||++.........
T Consensus        73 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~~H~dl~p~nili~~~-~~~~l~d~g~~~~~~~~~~~  149 (250)
T cd05085          73 LVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN--CIHRDLAARNCLVGEN-NVLKISDFGMSRQEDDGIYS  149 (250)
T ss_pred             CCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccChheEEEcCC-CeEEECCCccceeccccccc
Confidence            57899999999753 46899999999999999999999998  9999999999999876 78999999998764332211


Q ss_pred             --ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHH
Q 010730           80 --HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFV  155 (502)
Q Consensus        80 --~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI  155 (502)
                        ....+++.|+|||++. +.++.++|||||||++|+|++ |..||... +.......+..+... ..+...+..+.+++
T Consensus       150 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~li  227 (250)
T cd05085         150 SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGM-TNQQAREQVEKGYRM-SCPQKCPDDVYKVM  227 (250)
T ss_pred             cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCC-CHHHHHHHHHcCCCC-CCCCCCCHHHHHHH
Confidence              1223467799999876 458889999999999999998 99999764 445555555544332 23334578999999


Q ss_pred             HHhhh-CcCCCCCHHHHhcC
Q 010730          156 GKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .+||. +|.+||++.|+++.
T Consensus       228 ~~~l~~~p~~Rp~~~~l~~~  247 (250)
T cd05085         228 QRCWDYKPENRPKFSELQKE  247 (250)
T ss_pred             HHHcccCcccCCCHHHHHHH
Confidence            99998 99999999999874


No 350
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.92  E-value=8.3e-25  Score=216.72  Aligned_cols=168  Identities=21%  Similarity=0.323  Sum_probs=136.3

Q ss_pred             CCCCCcHHHHHHhCC----------------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCC
Q 010730            1 MFTSGTLREYRKKYT----------------------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGH   58 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~----------------------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~   58 (502)
                      |+.+|+|.+++....                      .+++..+..++.||+.||+|||..+  ++||||||+||+++.+
T Consensus        89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~--i~H~dl~p~nil~~~~  166 (288)
T cd05050          89 YMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK--FVHRDLATRNCLVGEN  166 (288)
T ss_pred             cCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC--eecccccHhheEecCC
Confidence            567899999997532                      3778889999999999999999988  9999999999999876


Q ss_pred             CCcEEEEecCCceeccCCCC---cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHH
Q 010730           59 LGQIKIGDLGLAAILRGSQQ---AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKK  133 (502)
Q Consensus        59 ~g~vKL~DFGlA~~~~~~~~---~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~k  133 (502)
                       +.+||+|||++..+.....   .....+++.|+|||++. ..++.++|||||||++|+|++ |..||.+ .+..++...
T Consensus       167 -~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~-~~~~~~~~~  244 (288)
T cd05050         167 -MVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG-MAHEEVIYY  244 (288)
T ss_pred             -CceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHH
Confidence             7999999999876533211   12234567899999775 468999999999999999998 8889876 455667777


Q ss_pred             hhcCCCCCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          134 VTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       134 I~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      +..+.... .+...+..+.+||.+||. +|.+|||+.|+++
T Consensus       245 ~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         245 VRDGNVLS-CPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             HhcCCCCC-CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            77665542 233456889999999998 9999999999875


No 351
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.92  E-value=1.2e-25  Score=219.47  Aligned_cols=173  Identities=25%  Similarity=0.357  Sum_probs=136.8

Q ss_pred             CCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc--
Q 010730            1 MFTSGTLREYRKKY----TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR--   74 (502)
Q Consensus         1 ~~tgGsL~~yi~k~----~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~--   74 (502)
                      |+..|+|.+++...    ..+++.++..|+.+|++||++||+..++.+||||||.|||+.+. +.++|+|||.+....  
T Consensus       104 yy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~-~~~vl~D~GS~~~a~i~  182 (302)
T KOG2345|consen  104 YYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDS-GLPVLMDLGSATQAPIQ  182 (302)
T ss_pred             hhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCC-CceEEEeccCccccceE
Confidence            57889999999643    36999999999999999999999999999999999999999886 799999999986542  


Q ss_pred             --CCCCc------ccccCCCcccCccccccC----CCCcccchhHHHHHHHHhhccCCCCCC-CChHHHHHHhhcCCCCC
Q 010730           75 --GSQQA------HSVIGTPEFMAPELYEED----YNELVDIYSFGMCVLEMLTSEYPYSEC-SNPAQIYKKVTSGKLPG  141 (502)
Q Consensus        75 --~~~~~------~s~vGTp~Y~APEvl~~~----ys~~~DIWSLGviLyeLLTG~~Pf~~~-~~~~ql~~kI~~g~~p~  141 (502)
                        .....      ....+|..|.|||++.-+    .++++|||||||+||.|+.|..||.-. .....+--.+.++++..
T Consensus       183 i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~  262 (302)
T KOG2345|consen  183 IEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISI  262 (302)
T ss_pred             eechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeecccccc
Confidence              11111      234579999999998633    688999999999999999999999421 01111122334445443


Q ss_pred             cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          142 AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       142 ~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      +-....+..+.++|..||+ ||.+||++.+|+.+
T Consensus       263 P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  263 PNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             CCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            4444468899999999999 99999999999864


No 352
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored 
Probab=99.92  E-value=1.1e-24  Score=213.08  Aligned_cols=169  Identities=21%  Similarity=0.377  Sum_probs=136.1

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++.+. +.+++..+..++.|++.||+|||+.+  |+||||||+||+++.+ +.+||+|||++.........
T Consensus        87 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nili~~~-~~~kl~dfg~~~~~~~~~~~  163 (268)
T cd05063          87 YMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN--YVHRDLAARNILVNSN-LECKVSDFGLSRVLEDDPEG  163 (268)
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEEcCC-CcEEECCCccceeccccccc
Confidence            57889999999764 57899999999999999999999998  9999999999999876 78999999999765432211


Q ss_pred             --c--cccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHH
Q 010730           80 --H--SVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARR  153 (502)
Q Consensus        80 --~--s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~  153 (502)
                        .  ....++.|+|||++. ..++.++|||||||++|+|++ |..||.. .+...+.+.+..+... +.....+.++.+
T Consensus       164 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~-~~~~~~~~~i~~~~~~-~~~~~~~~~~~~  241 (268)
T cd05063         164 TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWD-MSNHEVMKAINDGFRL-PAPMDCPSAVYQ  241 (268)
T ss_pred             ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCc-CCHHHHHHHHhcCCCC-CCCCCCCHHHHH
Confidence              1  122345799999875 458899999999999999998 9999976 3445666666654332 223345678999


Q ss_pred             HHHHhhh-CcCCCCCHHHHhcC
Q 010730          154 FVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      ++.+||. +|.+||++.++++.
T Consensus       242 li~~c~~~~p~~Rp~~~~i~~~  263 (268)
T cd05063         242 LMLQCWQQDRARRPRFVDIVNL  263 (268)
T ss_pred             HHHHHcCCCcccCcCHHHHHHH
Confidence            9999998 99999999999863


No 353
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.92  E-value=8.6e-25  Score=213.86  Aligned_cols=170  Identities=22%  Similarity=0.371  Sum_probs=139.5

Q ss_pred             CCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccC
Q 010730            1 MFTSGTLREYRKK----YTRVDIRAVKNWARQILRGIAYLHG-HDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG   75 (502)
Q Consensus         1 ~~tgGsL~~yi~k----~~~L~e~~i~~i~~QIL~gL~YLHs-~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~   75 (502)
                      |+.|++|.+++..    ...+++..++.++.||+.||.|||. .+  |+|+||||+||+++.+ +.+||+|||++.....
T Consensus        90 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~--i~H~dl~~~nil~~~~-~~~~l~dfg~~~~~~~  166 (269)
T cd08528          90 LIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR--IVHRDLTPNNIMLGED-DKVTITDFGLAKQKQP  166 (269)
T ss_pred             cCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc--eeecCCCHHHEEECCC-CcEEEecccceeeccc
Confidence            5678999998843    3569999999999999999999996 55  9999999999999876 7899999999987654


Q ss_pred             CCCcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           76 SQQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        76 ~~~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      ........|+..|+|||++.+ .++.++|+||||+++|+|++|..||.. .+.......+..+..........++.+.++
T Consensus       167 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  245 (269)
T cd08528         167 ESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYS-TNMLSLATKIVEAVYEPLPEGMYSEDVTDV  245 (269)
T ss_pred             ccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccc-cCHHHHHHHHhhccCCcCCcccCCHHHHHH
Confidence            444455678999999998764 488999999999999999999999965 444455555555544433333557899999


Q ss_pred             HHHhhh-CcCCCCCHHHHhcC
Q 010730          155 VGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~h  174 (502)
                      |.+||. +|.+||++.|+..+
T Consensus       246 i~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         246 ITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             HHHHCCCCCccCCCHHHHHHH
Confidence            999998 99999999998764


No 354
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.92  E-value=7.8e-25  Score=215.26  Aligned_cols=165  Identities=19%  Similarity=0.305  Sum_probs=129.0

Q ss_pred             CCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCC------CcEEEEecCCceec
Q 010730            1 MFTSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHL------GQIKIGDLGLAAIL   73 (502)
Q Consensus         1 ~~tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~------g~vKL~DFGlA~~~   73 (502)
                      |+.+|+|..++.+ ...+++..++.++.||+.||+|||+.+  |+||||||+|||++.+.      ..+|++|||++...
T Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~  162 (262)
T cd05077          85 FVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD--LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITV  162 (262)
T ss_pred             cccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCC--eECCCCCcccEEEecCCccCCCCceeEeCCCCCCccc
Confidence            5788999999975 456999999999999999999999988  99999999999997541      13899999998654


Q ss_pred             cCCCCcccccCCCcccCccccc--cCCCCcccchhHHHHHHHHh-hccCCCCCCCChHHHHHHhhcCCCCCcccccccHH
Q 010730           74 RGSQQAHSVIGTPEFMAPELYE--EDYNELVDIYSFGMCVLEML-TSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAE  150 (502)
Q Consensus        74 ~~~~~~~s~vGTp~Y~APEvl~--~~ys~~~DIWSLGviLyeLL-TG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~  150 (502)
                      ..   .....|++.|+|||++.  ..++.++|||||||++|+|+ +|..||... ...+.. ....+...  .......+
T Consensus       163 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~-~~~~~~-~~~~~~~~--~~~~~~~~  235 (262)
T cd05077         163 LS---RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDK-TLAEKE-RFYEGQCM--LVTPSCKE  235 (262)
T ss_pred             cC---cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCc-chhHHH-HHHhcCcc--CCCCChHH
Confidence            32   23456889999999875  45889999999999999998 588888653 222222 22222221  11123467


Q ss_pred             HHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          151 ARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       151 l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      ++++|.+||. +|.+||++.+||.+
T Consensus       236 ~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         236 LADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHh
Confidence            8999999999 99999999999975


No 355
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.92  E-value=9.7e-25  Score=212.21  Aligned_cols=168  Identities=24%  Similarity=0.385  Sum_probs=135.9

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++.+.  ..+++..+..++.||+.||.|||.++  |+|+||||+||+++.+ +.+||+|||++..+.....
T Consensus        82 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~--i~h~di~p~nili~~~-~~~~l~d~g~~~~~~~~~~  158 (261)
T cd05034          82 YMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN--YIHRDLAARNILVGEN-LVCKIADFGLARLIEDDEY  158 (261)
T ss_pred             ccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcchheEEEcCC-CCEEECccccceeccchhh
Confidence            56889999999764  36899999999999999999999998  9999999999999887 7999999999976643211


Q ss_pred             --cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 --AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 --~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                        .....++..|+|||.+. ..++.++|||||||++|+|++ |..||.+ .+....++++..+... ..+...+.+++++
T Consensus       159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  236 (261)
T cd05034         159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPG-MTNREVLEQVERGYRM-PRPPNCPEELYDL  236 (261)
T ss_pred             hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHcCCCC-CCCCCCCHHHHHH
Confidence              11223467899999876 458889999999999999999 9999976 4445566666554322 2233347789999


Q ss_pred             HHHhhh-CcCCCCCHHHHhc
Q 010730          155 VGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~  173 (502)
                      +.+||. +|.+||++++++.
T Consensus       237 i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         237 MLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             HHHHcccCcccCCCHHHHHH
Confidence            999998 9999999999875


No 356
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.92  E-value=2e-24  Score=210.91  Aligned_cols=168  Identities=21%  Similarity=0.389  Sum_probs=135.1

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.+|+|.+++.+.  ..+++..+..++.||+.||.|||+.+  ++||||||+||+++.. +.+||+|||++..+.....
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~  157 (260)
T cd05073          81 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSAS-LVCKIADFGLARVIEDNEY  157 (260)
T ss_pred             eCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcCC-CcEEECCCcceeeccCCCc
Confidence            56789999999764  45788899999999999999999988  9999999999999876 7999999999976543221


Q ss_pred             --cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 --AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 --~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                        .....++..|+|||++.. .++.++|+|||||++|+|+| |..||.. .+...+...+..+... ......+.++.++
T Consensus       158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  235 (260)
T cd05073         158 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG-MSNPEVIRALERGYRM-PRPENCPEELYNI  235 (260)
T ss_pred             ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCC-CCHHHHHHHHhCCCCC-CCcccCCHHHHHH
Confidence              122345678999998764 47889999999999999999 9999976 3444555555554332 2234456789999


Q ss_pred             HHHhhh-CcCCCCCHHHHhc
Q 010730          155 VGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~  173 (502)
                      +.+||. +|.+||++.+++.
T Consensus       236 i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         236 MMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             HHHHcccCcccCcCHHHHHH
Confidence            999998 9999999998875


No 357
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.92  E-value=1.9e-24  Score=214.06  Aligned_cols=170  Identities=26%  Similarity=0.439  Sum_probs=132.1

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC-
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~-   78 (502)
                      |+.||+|.+++.+. ..+++..+..++.||+.||+|||+.+  |+||||||+||+++.+ +.+||+|||++..+..... 
T Consensus        89 ~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g--i~H~dlkp~Nil~~~~-~~~~l~dfg~~~~~~~~~~~  165 (284)
T cd05079          89 FLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEY  165 (284)
T ss_pred             ccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccchheEEEcCC-CCEEECCCccccccccCccc
Confidence            56799999999765 46899999999999999999999998  9999999999999876 7899999999986643221 


Q ss_pred             ---cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCC--------------CChHHHHHHhhcCCCC
Q 010730           79 ---AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSEC--------------SNPAQIYKKVTSGKLP  140 (502)
Q Consensus        79 ---~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~--------------~~~~ql~~kI~~g~~p  140 (502)
                         .....|+..|+|||++. ..++.++|||||||++|+|+|+..|+...              .........+..+...
T Consensus       166 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (284)
T cd05079         166 YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRL  245 (284)
T ss_pred             eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccC
Confidence               12355777899999765 45889999999999999999987664221              0111222222233222


Q ss_pred             CcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          141 GAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       141 ~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                       ..+...+..+.+||.+||. +|.+||+++++++.
T Consensus       246 -~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         246 -PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             -CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence             2233457899999999998 99999999999874


No 358
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.92  E-value=2.1e-24  Score=211.42  Aligned_cols=169  Identities=20%  Similarity=0.356  Sum_probs=134.5

Q ss_pred             CCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++.. .+.+++..++.++.||+.||.|||+++  ++||||||+||+++.+ +.+||+|||++.........
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g--~~H~dl~p~nili~~~-~~~kl~dfg~~~~~~~~~~~  162 (269)
T cd05065          86 FMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN--YVHRDLAARNILVNSN-LVCKVSDFGLSRFLEDDTSD  162 (269)
T ss_pred             cCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccChheEEEcCC-CcEEECCCccccccccCccc
Confidence            5678999999976 456899999999999999999999998  9999999999999876 68999999998765432211


Q ss_pred             c---ccc---CCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHH
Q 010730           80 H---SVI---GTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEA  151 (502)
Q Consensus        80 ~---s~v---GTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l  151 (502)
                      .   ...   .+..|+|||++. ..++.++|||||||++|||++ |..||.. .+...+.+.+..... ...+...+..+
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~-~~~~~~~~~i~~~~~-~~~~~~~~~~~  240 (269)
T cd05065         163 PTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD-MSNQDVINAIEQDYR-LPPPMDCPTAL  240 (269)
T ss_pred             cccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCC-CCHHHHHHHHHcCCc-CCCcccCCHHH
Confidence            1   111   145799999876 458899999999999999887 9999976 444556666654322 22233456789


Q ss_pred             HHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          152 RRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       152 ~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .+++.+||. +|.+||++.+++..
T Consensus       241 ~~li~~~l~~~p~~Rp~~~~i~~~  264 (269)
T cd05065         241 HQLMLDCWQKDRNARPKFGQIVST  264 (269)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999998 99999999999863


No 359
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.92  E-value=1.7e-24  Score=228.40  Aligned_cols=155  Identities=25%  Similarity=0.371  Sum_probs=126.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC---cccccCCCcccCcc
Q 010730           16 RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ---AHSVIGTPEFMAPE   92 (502)
Q Consensus        16 ~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~---~~s~vGTp~Y~APE   92 (502)
                      .+++..+..++.||+.||+|||+.+  |+||||||+|||++.+ +.+||+|||+++.+.....   .....+++.|+|||
T Consensus       233 ~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dikp~Nill~~~-~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE  309 (400)
T cd05105         233 GLTTLDLLSFTYQVARGMEFLASKN--CVHRDLAARNVLLAQG-KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPE  309 (400)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChHhEEEeCC-CEEEEEeCCcceeccccccccccCCcCCCcceEChh
Confidence            4788889999999999999999988  9999999999999987 6899999999986543221   23345788999999


Q ss_pred             ccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhhh-CcCCCCCHH
Q 010730           93 LYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAK  169 (502)
Q Consensus        93 vl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~  169 (502)
                      ++. ..++.++|||||||++|+|++ |..||........++..+..+..+ ..+...+..++++|.+||. +|.+||++.
T Consensus       310 ~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~  388 (400)
T cd05105         310 SIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRM-AKPDHATQEVYDIMVKCWNSEPEKRPSFL  388 (400)
T ss_pred             hhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCC-CCCccCCHHHHHHHHHHCccCHhHCcCHH
Confidence            875 458999999999999999997 999998755555666666665432 3344557889999999998 999999998


Q ss_pred             HHhcC
Q 010730          170 ELLLD  174 (502)
Q Consensus       170 ELL~h  174 (502)
                      +|.+.
T Consensus       389 ~l~~~  393 (400)
T cd05105         389 HLSDI  393 (400)
T ss_pred             HHHHH
Confidence            88763


No 360
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.92  E-value=2.1e-24  Score=211.54  Aligned_cols=168  Identities=23%  Similarity=0.395  Sum_probs=136.2

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC-
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~-   78 (502)
                      |+.+|+|.+++.+. +.+++..+..++.||+.||.|||+++  ++||||||+||+++.+ +.+||+|||++..+..... 
T Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlkp~nili~~~-~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd05066          86 YMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILVNSN-LVCKVSDFGLSRVLEDDPEA  162 (267)
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeehhhchhcEEECCC-CeEEeCCCCcccccccccce
Confidence            56799999999765 56899999999999999999999998  9999999999999876 7899999999986543221 


Q ss_pred             c---ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHH
Q 010730           79 A---HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARR  153 (502)
Q Consensus        79 ~---~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~  153 (502)
                      .   ....++..|+|||++. ..++.++|+|||||++|+|++ |..||.+. ...++++.+..+..+ ......+..+++
T Consensus       163 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~  240 (267)
T cd05066         163 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEM-SNQDVIKAIEEGYRL-PAPMDCPAALHQ  240 (267)
T ss_pred             eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccC-CHHHHHHHHhCCCcC-CCCCCCCHHHHH
Confidence            1   1122356899999886 468999999999999999886 99999763 445566666655332 233345778999


Q ss_pred             HHHHhhh-CcCCCCCHHHHhc
Q 010730          154 FVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      ++.+||. +|.+||++.++++
T Consensus       241 li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         241 LMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             HHHHHcccCchhCCCHHHHHH
Confidence            9999998 9999999999886


No 361
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.92  E-value=1.4e-24  Score=243.10  Aligned_cols=99  Identities=26%  Similarity=0.494  Sum_probs=79.6

Q ss_pred             cCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCC-cccccccHHHHHHHHHhhh
Q 010730           83 IGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPG-AFHRIQDAEARRFVGKCLE  160 (502)
Q Consensus        83 vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~-~~~~~~s~~l~~LI~kcL~  160 (502)
                      +||+.|+|||++. ..|+.++|||||||+||||++|..||.+ ....+++..+.....+. ......+..+.+++.+||.
T Consensus       541 vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~-~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~  619 (669)
T cd05610         541 LGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFND-ETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLT  619 (669)
T ss_pred             eeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcc
Confidence            5799999999775 4589999999999999999999999976 56666777766544321 1122346789999999998


Q ss_pred             -CcCCCCCHHHHhcCCCCcCCCC
Q 010730          161 -NVSKRLPAKELLLDPFLASDAG  182 (502)
Q Consensus       161 -dP~kRpSa~ELL~hPff~~~~~  182 (502)
                       +|.+||++.|+|.||||....+
T Consensus       620 ~dP~~R~ta~e~l~h~~~~~~~~  642 (669)
T cd05610         620 MDPTKRAGLKELKQHPLFHGVDW  642 (669)
T ss_pred             cChhHCcCHHHHHhCHhhcCCCH
Confidence             9999999999999999976433


No 362
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.92  E-value=2.1e-24  Score=211.15  Aligned_cols=169  Identities=19%  Similarity=0.336  Sum_probs=135.0

Q ss_pred             CCCCCcHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc
Q 010730            1 MFTSGTLREYRKKY------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR   74 (502)
Q Consensus         1 ~~tgGsL~~yi~k~------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~   74 (502)
                      |+.+|+|.+++...      ..++...++.++.||+.||+|||+.+  |+||||||+||+++.+ +.+||+|||++....
T Consensus        88 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~nili~~~-~~~kl~dfg~~~~~~  164 (273)
T cd05074          88 FMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN--FIHRDLAARNCMLNEN-MTVCVADFGLSKKIY  164 (273)
T ss_pred             cCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccchhhEEEcCC-CCEEECccccccccc
Confidence            46789999987532      24789999999999999999999988  9999999999999876 789999999987654


Q ss_pred             CCCC---cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccH
Q 010730           75 GSQQ---AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDA  149 (502)
Q Consensus        75 ~~~~---~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~  149 (502)
                      ....   .....+++.|++||.+.. .++.++|||||||++|+|++ |..||.+ .+...++..+..+.... .....+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~-~~~~~~~  242 (273)
T cd05074         165 SGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAG-VENSEIYNYLIKGNRLK-QPPDCLE  242 (273)
T ss_pred             CCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCC-CCHHHHHHHHHcCCcCC-CCCCCCH
Confidence            3221   122345678999998754 47889999999999999999 8899865 45566676666554322 2234467


Q ss_pred             HHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          150 EARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       150 ~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .+.+++.+||. +|.+||++.+++..
T Consensus       243 ~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         243 DVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            89999999998 99999999999874


No 363
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including 
Probab=99.92  E-value=2.6e-24  Score=214.53  Aligned_cols=169  Identities=23%  Similarity=0.367  Sum_probs=131.1

Q ss_pred             CCCCCcHHHHHHhCC------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecC
Q 010730            1 MFTSGTLREYRKKYT------------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLG   68 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~------------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFG   68 (502)
                      |+.+|+|.+++....            .+++..+..++.||+.||+|||+++  ++||||||+||+++.+ +.+||+|||
T Consensus        98 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~Nill~~~-~~~kl~dfg  174 (295)
T cd05097          98 YMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN--FVHRDLATRNCLVGNH-YTIKIADFG  174 (295)
T ss_pred             cCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC--eeccccChhhEEEcCC-CcEEecccc
Confidence            578999999996532            3788899999999999999999998  9999999999999876 689999999


Q ss_pred             CceeccCCCC---cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh--ccCCCCCCCChHHHHHHhhc------
Q 010730           69 LAAILRGSQQ---AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT--SEYPYSECSNPAQIYKKVTS------  136 (502)
Q Consensus        69 lA~~~~~~~~---~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT--G~~Pf~~~~~~~ql~~kI~~------  136 (502)
                      ++..+.....   .....+++.|+|||++. +.++.++|||||||++|+|++  |..||... +..++...+..      
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~  253 (295)
T cd05097         175 MSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLL-SDEQVIENTGEFFRNQG  253 (295)
T ss_pred             cccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCccc-ChHHHHHHHHHhhhhcc
Confidence            9976533221   22345577899999764 568999999999999999988  67888663 33333333211      


Q ss_pred             CCCCCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          137 GKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       137 g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      .......+...+..+.+||.+||. +|.+||++.++++
T Consensus       254 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         254 RQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             ccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            111112233456889999999999 9999999999976


No 364
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.92  E-value=3.5e-24  Score=213.74  Aligned_cols=169  Identities=22%  Similarity=0.350  Sum_probs=129.6

Q ss_pred             CCCCCcHHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCC
Q 010730            1 MFTSGTLREYRKKYT-----------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGL   69 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~-----------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGl   69 (502)
                      |+.+|+|.+++.+..           .+++..+..++.||+.||+|||+++  |+||||||+|||++.+ +.+||+|||+
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dlkp~Nili~~~-~~~~l~dfg~  176 (296)
T cd05095         100 YMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN--FVHRDLATRNCLVGKN-YTIKIADFGM  176 (296)
T ss_pred             eCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC--eecccCChheEEEcCC-CCEEeccCcc
Confidence            567899999997643           3667789999999999999999998  9999999999999876 7899999999


Q ss_pred             ceeccCCCC---cccccCCCcccCcccc-ccCCCCcccchhHHHHHHHHhh--ccCCCCCCCChHHHHHHhhc------C
Q 010730           70 AAILRGSQQ---AHSVIGTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLT--SEYPYSECSNPAQIYKKVTS------G  137 (502)
Q Consensus        70 A~~~~~~~~---~~s~vGTp~Y~APEvl-~~~ys~~~DIWSLGviLyeLLT--G~~Pf~~~~~~~ql~~kI~~------g  137 (502)
                      +..+.....   .....+++.|+|||+. .+.++.++|||||||++|+|++  |..||... ...++...+..      .
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~  255 (296)
T cd05095         177 SRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL-SDEQVIENTGEFFRDQGR  255 (296)
T ss_pred             cccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc-ChHHHHHHHHHHHhhccc
Confidence            976533221   1223456789999965 4568999999999999999998  77898653 33333332211      0


Q ss_pred             CCCCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          138 KLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       138 ~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      ......+...+..+++|+.+||. +|.+||++.++++
T Consensus       256 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         256 QVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             cccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            01111223346889999999999 9999999999875


No 365
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.91  E-value=3.6e-24  Score=211.45  Aligned_cols=170  Identities=27%  Similarity=0.410  Sum_probs=129.3

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++.+. ..+++..+..++.||+.||+|||+++  |+||||||+||+++.+ +.+||+|||++..+......
T Consensus        88 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~--i~H~dlkp~nili~~~-~~~~l~dfg~~~~~~~~~~~  164 (284)
T cd05081          88 YLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR--YVHRDLATRNILVESE-NRVKIGDFGLTKVLPQDKEY  164 (284)
T ss_pred             ecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHhhEEECCC-CeEEECCCcccccccCCCcc
Confidence            56799999999764 46899999999999999999999998  9999999999999876 78999999999876433221


Q ss_pred             ----ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCCh---------------HHHHHHhhcCCC
Q 010730           80 ----HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNP---------------AQIYKKVTSGKL  139 (502)
Q Consensus        80 ----~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~---------------~ql~~kI~~g~~  139 (502)
                          ....++..|+|||++.+ .++.++|||||||++|+|++|..|+......               ..+...+..+..
T Consensus       165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (284)
T cd05081         165 YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGR  244 (284)
T ss_pred             eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCc
Confidence                11223456999998764 5889999999999999999987765321100               011112222211


Q ss_pred             CCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          140 PGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       140 p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                       .......+..+.+||.+||. +|.+|||+.|++..
T Consensus       245 -~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  279 (284)
T cd05081         245 -LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ  279 (284)
T ss_pred             -CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence             12233456789999999998 99999999999863


No 366
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.91  E-value=4.2e-24  Score=211.70  Aligned_cols=165  Identities=21%  Similarity=0.326  Sum_probs=128.8

Q ss_pred             CCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCC------CCcEEEEecCCceec
Q 010730            1 MFTSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGH------LGQIKIGDLGLAAIL   73 (502)
Q Consensus         1 ~~tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~------~g~vKL~DFGlA~~~   73 (502)
                      |+.+|+|..++.+ .+.+++..+..++.||+.||+|||+.+  |+||||||+||+++..      ...+|++|||++...
T Consensus        97 y~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~  174 (274)
T cd05076          97 FVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKN--LVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTA  174 (274)
T ss_pred             cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC--ccCCCCCcccEEEeccCcccCccceeeecCCcccccc
Confidence            6789999999976 567999999999999999999999988  9999999999999743      124899999987543


Q ss_pred             cCCCCcccccCCCcccCcccccc--CCCCcccchhHHHHHHHHh-hccCCCCCCCChHHHHHHhhcCCCCCcccccccHH
Q 010730           74 RGSQQAHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEML-TSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAE  150 (502)
Q Consensus        74 ~~~~~~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLL-TG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~  150 (502)
                      ..   .....+++.|+|||++.+  .++.++|||||||++|+|+ +|..||.... ..+....+... .  ..+....+.
T Consensus       175 ~~---~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~-~--~~~~~~~~~  247 (274)
T cd05076         175 LS---REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT-PSEKERFYEKK-H--RLPEPSCKE  247 (274)
T ss_pred             cc---ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC-hHHHHHHHHhc-c--CCCCCCChH
Confidence            22   123467889999998754  4889999999999999984 6999997643 23222222211 1  112223568


Q ss_pred             HHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          151 ARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       151 l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      +.++|.+||. +|.+||++.++|++
T Consensus       248 ~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         248 LATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             HHHHHHHHcccChhhCcCHHHHHHh
Confidence            9999999998 99999999999975


No 367
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.91  E-value=5.5e-25  Score=224.99  Aligned_cols=172  Identities=22%  Similarity=0.411  Sum_probs=136.2

Q ss_pred             CCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCC-------------------CCcE
Q 010730            4 SGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGH-------------------LGQI   62 (502)
Q Consensus         4 gGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~-------------------~g~v   62 (502)
                      |-++++|++++  .+++...|+.++.||+.+++|||+.+  ++|-||||||||+-..                   ...|
T Consensus       174 G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k--l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I  251 (415)
T KOG0671|consen  174 GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK--LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAI  251 (415)
T ss_pred             ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc--eeecCCChheEEEeccceEEEeccCCccceeccCCCcce
Confidence            45899999864  56999999999999999999999999  9999999999998311                   1358


Q ss_pred             EEEecCCceeccCCCCcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHH--HHHhhcCCC
Q 010730           63 KIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQI--YKKVTSGKL  139 (502)
Q Consensus        63 KL~DFGlA~~~~~~~~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql--~~kI~~g~~  139 (502)
                      |++|||-|....+.  -.+++.|..|.|||++.+ .++..+||||+||||+||.||...|+.-.|.+.+  .+.|.. ++
T Consensus       252 ~vIDFGsAtf~~e~--hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlG-p~  328 (415)
T KOG0671|consen  252 KVIDFGSATFDHEH--HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILG-PI  328 (415)
T ss_pred             EEEecCCcceeccC--cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhC-CC
Confidence            99999999875443  367889999999997754 6999999999999999999999999886665543  233322 22


Q ss_pred             CCc-----------------ccc-------------------------cccHHHHHHHHHhhh-CcCCCCCHHHHhcCCC
Q 010730          140 PGA-----------------FHR-------------------------IQDAEARRFVGKCLE-NVSKRLPAKELLLDPF  176 (502)
Q Consensus       140 p~~-----------------~~~-------------------------~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPf  176 (502)
                      |..                 |+.                         ....++-+||++||. ||.+|+|+.|+|.|||
T Consensus       329 P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpF  408 (415)
T KOG0671|consen  329 PSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPF  408 (415)
T ss_pred             cHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHH
Confidence            210                 000                         012357789999999 9999999999999999


Q ss_pred             CcCC
Q 010730          177 LASD  180 (502)
Q Consensus       177 f~~~  180 (502)
                      |+..
T Consensus       409 F~~~  412 (415)
T KOG0671|consen  409 FARL  412 (415)
T ss_pred             hhcC
Confidence            9753


No 368
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.91  E-value=1.7e-24  Score=203.30  Aligned_cols=174  Identities=24%  Similarity=0.449  Sum_probs=137.9

Q ss_pred             CCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc-c
Q 010730            3 TSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA-H   80 (502)
Q Consensus         3 tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~-~   80 (502)
                      +..+|..|... ++.++.+.++.++.|++.||.|||+++  |.||||||.|+|++.+ |.+|++|||+++-+.-.... .
T Consensus        83 cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshn--vlhrdlkpqnllin~n-gelkladfglarafgipvrcys  159 (292)
T KOG0662|consen   83 CDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHN--VLHRDLKPQNLLINRN-GELKLADFGLARAFGIPVRCYS  159 (292)
T ss_pred             hhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhh--hhhccCCcceEEeccC-CcEEecccchhhhcCCceEeee
Confidence            45678888865 578999999999999999999999999  9999999999999988 89999999999876543332 2


Q ss_pred             cccCCCcccCcccccc--CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhc-C-----CCCC----------
Q 010730           81 SVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTS-G-----KLPG----------  141 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~-g-----~~p~----------  141 (502)
                      ..+-|.+|.+|.++-+  -|++..|+||.|||+.|+.. |.+.|++..-.+|+.+.... |     .+|.          
T Consensus       160 aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~y  239 (292)
T KOG0662|consen  160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPY  239 (292)
T ss_pred             ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCccc
Confidence            3567999999998854  39999999999999999987 88778886555555443321 1     1110          


Q ss_pred             -cccc---------cccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          142 -AFHR---------IQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       142 -~~~~---------~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                       .++.         .....-++++.++|. +|.+|++|+++|+||||..
T Consensus       240 p~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d  288 (292)
T KOG0662|consen  240 PIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD  288 (292)
T ss_pred             CCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence             0000         123457899999998 9999999999999999964


No 369
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91  E-value=1.7e-24  Score=211.88  Aligned_cols=175  Identities=25%  Similarity=0.422  Sum_probs=137.8

Q ss_pred             CcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC-----
Q 010730            5 GTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-----   78 (502)
Q Consensus         5 GsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~-----   78 (502)
                      -+|+-.+.+. .+++...|+.++++++.||.|+|...  |+|||+|++|+|++++ |.+||+|||+++.+.....     
T Consensus       108 hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k--ilHRDmKaaNvLIt~d-gilklADFGlar~fs~~~n~~kpr  184 (376)
T KOG0669|consen  108 HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNK--ILHRDMKAANVLITKD-GILKLADFGLARAFSTSKNVVKPR  184 (376)
T ss_pred             hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhh--HHhhcccHhhEEEcCC-ceEEeeccccccceecccccCCCC
Confidence            4566667654 57999999999999999999999999  9999999999999987 8999999999976543221     


Q ss_pred             cccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHH-----------------------HHH
Q 010730           79 AHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQI-----------------------YKK  133 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql-----------------------~~k  133 (502)
                      ....+-|.+|.+||.+.+  .|+++.|||..|||+.+|+|+.+.+.+..+..++                       |+.
T Consensus       185 ytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~s  264 (376)
T KOG0669|consen  185 YTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQS  264 (376)
T ss_pred             cccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHh
Confidence            234567999999997754  5999999999999999999999998775544443                       233


Q ss_pred             hhcCCCCCc---------ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCCC
Q 010730          134 VTSGKLPGA---------FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAG  182 (502)
Q Consensus       134 I~~g~~p~~---------~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~~  182 (502)
                      +....+|..         -+...++++.+|+.++|. ||.+|+.++++|.|.||..++.
T Consensus       265 ie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~  323 (376)
T KOG0669|consen  265 IELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPM  323 (376)
T ss_pred             ccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCc
Confidence            222211110         011235688899999999 9999999999999999976543


No 370
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.91  E-value=9.3e-24  Score=229.07  Aligned_cols=176  Identities=24%  Similarity=0.351  Sum_probs=130.9

Q ss_pred             CCCCCcHHHHHHhC------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEe
Q 010730            1 MFTSGTLREYRKKY------------------------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVN   56 (502)
Q Consensus         1 ~~tgGsL~~yi~k~------------------------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~   56 (502)
                      |+.+|+|.+++...                        ..+++..++.++.||+.+|.|||.++  |+||||||+|||++
T Consensus       266 y~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~--ivHrDLKp~NILl~  343 (507)
T PLN03224        266 FESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIG--IVHRDIKPENLLVT  343 (507)
T ss_pred             cCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCchHhEEEC
Confidence            56778888887532                        12456788999999999999999998  99999999999998


Q ss_pred             CCCCcEEEEecCCceeccCCCCccc--ccCCCcccCccccccC---------------------CC--CcccchhHHHHH
Q 010730           57 GHLGQIKIGDLGLAAILRGSQQAHS--VIGTPEFMAPELYEED---------------------YN--ELVDIYSFGMCV  111 (502)
Q Consensus        57 ~~~g~vKL~DFGlA~~~~~~~~~~s--~vGTp~Y~APEvl~~~---------------------ys--~~~DIWSLGviL  111 (502)
                      .+ +.+||+|||++...........  ..+||.|+|||++...                     |+  .+.||||+||++
T Consensus       344 ~~-~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil  422 (507)
T PLN03224        344 VD-GQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLL  422 (507)
T ss_pred             CC-CcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHH
Confidence            87 6899999999976543322222  2358999999976421                     11  347999999999


Q ss_pred             HHHhhccC-CCCCC----------CChHHHHHHhhcCCCCCcccccccHHHHHHHHHhhh-Cc---CCCCCHHHHhcCCC
Q 010730          112 LEMLTSEY-PYSEC----------SNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NV---SKRLPAKELLLDPF  176 (502)
Q Consensus       112 yeLLTG~~-Pf~~~----------~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP---~kRpSa~ELL~hPf  176 (502)
                      |+|++|.. ||.+.          .+....++.+.............+..+++|+.+||. +|   .+|+|++|+|.|||
T Consensus       423 ~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~  502 (507)
T PLN03224        423 MQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRF  502 (507)
T ss_pred             HHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCC
Confidence            99999886 66432          112222334433443333344567899999999997 44   68999999999999


Q ss_pred             CcC
Q 010730          177 LAS  179 (502)
Q Consensus       177 f~~  179 (502)
                      |..
T Consensus       503 f~~  505 (507)
T PLN03224        503 FLP  505 (507)
T ss_pred             cCC
Confidence            964


No 371
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.91  E-value=4.1e-24  Score=243.36  Aligned_cols=170  Identities=28%  Similarity=0.386  Sum_probs=129.0

Q ss_pred             CCCCCcHHHHHHhC-----------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCC
Q 010730            1 MFTSGTLREYRKKY-----------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGL   69 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-----------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGl   69 (502)
                      |+.||+|.+++...           ..++...+..++.||+.||+|||+++  |+||||||+||+++.+ +.+||+|||+
T Consensus        83 Y~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G--IIHRDLKPeNILLd~d-g~vKLiDFGL  159 (932)
T PRK13184         83 YIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG--VLHRDLKPDNILLGLF-GEVVILDWGA  159 (932)
T ss_pred             cCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchheEEEcCC-CCEEEEecCc
Confidence            57899999998642           23566778899999999999999998  9999999999999876 7999999999


Q ss_pred             ceeccCC-------------------CCcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHH
Q 010730           70 AAILRGS-------------------QQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQ  129 (502)
Q Consensus        70 A~~~~~~-------------------~~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~q  129 (502)
                      ++.....                   ......+||+.|+|||++.+ .++.++|||||||++|+|+||..||........
T Consensus       160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki  239 (932)
T PRK13184        160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI  239 (932)
T ss_pred             ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence            9865210                   01123579999999998764 589999999999999999999999976333222


Q ss_pred             HHHHhhcCCCCCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          130 IYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       130 l~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      .+................++.+.+++.+||. +|.+|++..+.|.
T Consensus       240 ~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        240 SYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             hhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            2322221111111122356789999999999 9999987655553


No 372
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.91  E-value=8e-24  Score=223.53  Aligned_cols=154  Identities=26%  Similarity=0.399  Sum_probs=126.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC---CcccccCCCcccCccc
Q 010730           17 VDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ---QAHSVIGTPEFMAPEL   93 (502)
Q Consensus        17 L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~---~~~s~vGTp~Y~APEv   93 (502)
                      +++..++.++.||+.||+|||+.+  |+||||||+|||++.+ +.+||+|||+++......   ......+++.|+|||+
T Consensus       236 l~~~~~~~~~~qi~~aL~~LH~~~--ivHrdlkp~NiLl~~~-~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~  312 (401)
T cd05107         236 LSYMDLVGFSYQVANGMEFLASKN--CVHRDLAARNVLICEG-KLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPES  312 (401)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCC--cCcccCCcceEEEeCC-CEEEEEecCcceecccccccccCCCcCCCCceeChHH
Confidence            567778899999999999999987  9999999999999876 789999999998653221   1223467889999998


Q ss_pred             cc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhhh-CcCCCCCHHH
Q 010730           94 YE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKE  170 (502)
Q Consensus        94 l~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~E  170 (502)
                      +. ..++.++|||||||++|||++ |..||........++..+..+..+ ..+...+.++.++|.+||. +|.+||++++
T Consensus       313 ~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~l~~li~~cl~~~P~~RPs~~e  391 (401)
T cd05107         313 IFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRM-AKPAHASDEIYEIMQKCWEEKFEIRPDFSQ  391 (401)
T ss_pred             hcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            75 458899999999999999998 899998765556666666655432 3344567899999999998 9999999999


Q ss_pred             HhcC
Q 010730          171 LLLD  174 (502)
Q Consensus       171 LL~h  174 (502)
                      |+..
T Consensus       392 ll~~  395 (401)
T cd05107         392 LVHL  395 (401)
T ss_pred             HHHH
Confidence            9874


No 373
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.91  E-value=7.2e-24  Score=216.31  Aligned_cols=172  Identities=30%  Similarity=0.437  Sum_probs=133.7

Q ss_pred             CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccc
Q 010730            3 TSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSV   82 (502)
Q Consensus         3 tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~   82 (502)
                      .+++|.++++. .++++..+..++.||+.||.|||+.+  |+||||||+||+++.+ +.+||+|||++.....  .....
T Consensus        92 ~~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~--iiH~dl~p~Nili~~~-~~~~l~dfg~~~~~~~--~~~~~  165 (328)
T cd07856          92 LGTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAG--VVHRDLKPSNILINEN-CDLKICDFGLARIQDP--QMTGY  165 (328)
T ss_pred             hccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEeECCC-CCEEeCccccccccCC--CcCCC
Confidence            36789988865 46889999999999999999999998  9999999999999876 7899999999875432  23445


Q ss_pred             cCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChH--------------HHHHHhhcC---------
Q 010730           83 IGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPA--------------QIYKKVTSG---------  137 (502)
Q Consensus        83 vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~--------------ql~~kI~~g---------  137 (502)
                      .+++.|+|||++.+  .++.++|||||||++|+|++|..||.......              ++.+.+..+         
T Consensus       166 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (328)
T cd07856         166 VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSL  245 (328)
T ss_pred             cccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhc
Confidence            78999999998754  58899999999999999999999997532211              111111000         


Q ss_pred             CC--CCc---ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          138 KL--PGA---FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       138 ~~--p~~---~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      ..  +..   .....+..++++|.+||. +|.+||++.++|.||||...
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~  294 (328)
T cd07856         246 PKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPY  294 (328)
T ss_pred             cccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccc
Confidence            00  000   011246789999999998 99999999999999999643


No 374
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.90  E-value=1.5e-23  Score=205.69  Aligned_cols=170  Identities=25%  Similarity=0.420  Sum_probs=132.0

Q ss_pred             CCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKYT-RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~-~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++.+.+ .+++..+..++.||+.||+|||+.+  |+||||||+||+++.+ +.+||+|||++.........
T Consensus        89 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~  165 (284)
T cd05038          89 YLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR--YIHRDLAARNILVESE-DLVKISDFGLAKVLPEDKDY  165 (284)
T ss_pred             cCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcCC-CCEEEcccccccccccCCcc
Confidence            467899999998755 6999999999999999999999998  9999999999999887 79999999999876532211


Q ss_pred             ----ccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCC--------------hHHHHHHhhcCCCC
Q 010730           80 ----HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSN--------------PAQIYKKVTSGKLP  140 (502)
Q Consensus        80 ----~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~--------------~~ql~~kI~~g~~p  140 (502)
                          ....++..|+|||.+. ..++.++||||||+++|+|++|..|+.....              ...+...+..+.. 
T Consensus       166 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  244 (284)
T cd05038         166 YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGER-  244 (284)
T ss_pred             eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCc-
Confidence                1223456799999775 4588899999999999999999999864221              1112222222221 


Q ss_pred             CcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          141 GAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       141 ~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      ...+...+.++.+++.+||. +|.+||++.|+++.
T Consensus       245 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  279 (284)
T cd05038         245 LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILI  279 (284)
T ss_pred             CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            12233446789999999999 99999999999863


No 375
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.90  E-value=5.2e-24  Score=234.85  Aligned_cols=176  Identities=27%  Similarity=0.472  Sum_probs=152.6

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-C
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-Q   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~   77 (502)
                      ||.||+.-+++++.  .++.|..+..+++.++.||.+||.+.  |||||||-.|||++.+ +.|||.|||++.++... .
T Consensus       102 fC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk--viHRDikG~NiLLT~e-~~VKLvDFGvSaQldsT~g  178 (953)
T KOG0587|consen  102 FCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK--VIHRDIKGQNVLLTEN-AEVKLVDFGVSAQLDSTVG  178 (953)
T ss_pred             ccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc--eeeecccCceEEEecc-CcEEEeeeeeeeeeecccc
Confidence            68899999999864  67999999999999999999999998  9999999999999988 89999999999887643 3


Q ss_pred             CcccccCCCcccCcccccc------CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHH
Q 010730           78 QAHSVIGTPEFMAPELYEE------DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEA  151 (502)
Q Consensus        78 ~~~s~vGTp~Y~APEvl~~------~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l  151 (502)
                      ...+.+|||.|||||++..      .|+..+|+||||++..||.-|.+|+.++.....+++...+.......+...+..+
T Consensus       179 rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~F  258 (953)
T KOG0587|consen  179 RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKF  258 (953)
T ss_pred             cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHH
Confidence            4578899999999999852      3788999999999999999999999887766777765554443333455668899


Q ss_pred             HHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          152 RRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       152 ~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                      -+||..||. |..+||+..++|+|||+..
T Consensus       259 ndFIs~cL~Kd~e~RP~~~~ll~hpFi~e  287 (953)
T KOG0587|consen  259 NDFISTCLVKDYEQRPSTEELLKHPFITE  287 (953)
T ss_pred             HHHHHHHHhhccccCcchhhhccCCcccc
Confidence            999999998 9999999999999999973


No 376
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.90  E-value=1.3e-23  Score=217.70  Aligned_cols=180  Identities=25%  Similarity=0.453  Sum_probs=146.5

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeC-C-CCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNG-H-LGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~-~-~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |+.|.+|.=|++.++-+++++++.|+.||+.||.||....+||||-||||.|||+-. + .|.+||+||||++++.....
T Consensus       549 YceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy  628 (775)
T KOG1151|consen  549 YCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSY  628 (775)
T ss_pred             ecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCcc
Confidence            788999999999999999999999999999999999999999999999999998743 2 47899999999998864321


Q ss_pred             --------cccccCCCcccCccccc-c----CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHH--hhc-CCCCCc
Q 010730           79 --------AHSVIGTPEFMAPELYE-E----DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKK--VTS-GKLPGA  142 (502)
Q Consensus        79 --------~~s~vGTp~Y~APEvl~-~----~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~k--I~~-g~~p~~  142 (502)
                              .....||-+|++||.+- +    +.+.++||||+|||+|..+.|+-||........|.+.  |.. .....+
T Consensus       629 ~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP  708 (775)
T KOG1151|consen  629 NSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFP  708 (775)
T ss_pred             CcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCC
Confidence                    23357999999999652 2    3688999999999999999999999654333444332  211 111123


Q ss_pred             ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          143 FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       143 ~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      ..++.+.++++||++||. .-..|..+.+|..||||.+.
T Consensus       709 ~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh  747 (775)
T KOG1151|consen  709 PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPH  747 (775)
T ss_pred             CCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence            345668899999999998 88899999999999999764


No 377
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.90  E-value=2.8e-24  Score=226.10  Aligned_cols=172  Identities=28%  Similarity=0.460  Sum_probs=138.1

Q ss_pred             CCcHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            4 SGTLREYRKKYTR---VDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         4 gGsL~~yi~k~~~---L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      +-+|++.+++++.   |..++++.|+.||+.||..|-..|  |+|.||||+|||++.....+||||||.|...... ...
T Consensus       517 slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~--vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~en-eit  593 (752)
T KOG0670|consen  517 SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG--VLHADIKPDNILVNESKNILKLCDFGSASFASEN-EIT  593 (752)
T ss_pred             hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC--eeecccCccceEeccCcceeeeccCccccccccc-ccc
Confidence            5689999999874   999999999999999999999998  9999999999999987778999999999766543 334


Q ss_pred             cccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHh--hcCCCCCc-----------c---
Q 010730           81 SVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKV--TSGKLPGA-----------F---  143 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI--~~g~~p~~-----------~---  143 (502)
                      .+.-+..|.|||++.| .|+...|+||+||+||||+||+..|++..|..-+ +-.  ..|++|..           |   
T Consensus       594 PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ML-rl~me~KGk~p~KmlRKgqF~dqHFD~d  672 (752)
T KOG0670|consen  594 PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQML-RLFMELKGKFPNKMLRKGQFKDQHFDQD  672 (752)
T ss_pred             HHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHH-HHHHHhcCCCcHHHhhhcchhhhhcccc
Confidence            4556778999997765 5999999999999999999999999986664433 211  12332210           0   


Q ss_pred             ------------------------------------------cccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          144 ------------------------------------------HRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       144 ------------------------------------------~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                                                                ....-..+++|+.+||. ||.+|+|..++|+||||..
T Consensus       673 ~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  673 LNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             cceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence                                                      00012458899999999 9999999999999999964


No 378
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.90  E-value=1.8e-24  Score=212.87  Aligned_cols=167  Identities=26%  Similarity=0.426  Sum_probs=139.6

Q ss_pred             hCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccccCCCcccCcc
Q 010730           13 KYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPE   92 (502)
Q Consensus        13 k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~vGTp~Y~APE   92 (502)
                      +..+++|..+-.+..-.+.||+||-.. ..|||||+||+|||++.. |.|||||||++..+..+-....-.|...|||||
T Consensus       160 q~~~ipE~Ilg~ItvatV~AL~yLK~~-lkiIHRDvKPSNILldr~-G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPE  237 (361)
T KOG1006|consen  160 QKSRIPENILGHITVATVDALDYLKEE-LKIIHRDVKPSNILLDRH-GDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPE  237 (361)
T ss_pred             HhccCcHhhhhheeeeehhHHHHHHHH-hhhhhccCChhheEEecC-CCEeeecccchHhHHHHHHhhhccCCccccChh
Confidence            446799999999999999999999854 239999999999999988 899999999998776554444457899999999


Q ss_pred             ccc---cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccc----cccHHHHHHHHHhhh-CcCC
Q 010730           93 LYE---EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHR----IQDAEARRFVGKCLE-NVSK  164 (502)
Q Consensus        93 vl~---~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~----~~s~~l~~LI~kcL~-dP~k  164 (502)
                      -+.   ..|+.++|+||||++|||++||.+||.++.+.-+....+..|..|.-...    ..+..+..||..||. |-..
T Consensus       238 Ri~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~  317 (361)
T KOG1006|consen  238 RIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSD  317 (361)
T ss_pred             ccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhccccc
Confidence            875   34999999999999999999999999988776666667777776633222    246789999999998 9999


Q ss_pred             CCCHHHHhcCCCCcCCC
Q 010730          165 RLPAKELLLDPFLASDA  181 (502)
Q Consensus       165 RpSa~ELL~hPff~~~~  181 (502)
                      ||...+|+.+||++...
T Consensus       318 Rpky~~Lk~~~fyr~y~  334 (361)
T KOG1006|consen  318 RPKYDDLKKFPFYRMYA  334 (361)
T ss_pred             CcchhhhhcCchhhhhh
Confidence            99999999999997653


No 379
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90  E-value=1.8e-23  Score=218.49  Aligned_cols=173  Identities=26%  Similarity=0.430  Sum_probs=131.2

Q ss_pred             CCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhC-CCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccC-C
Q 010730            1 MFTSGTLREYRKKYT--RVDIRAVKNWARQILRGIAYLHGH-DPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-S   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~--~L~e~~i~~i~~QIL~gL~YLHs~-g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~-~   76 (502)
                      ||.+|+|.+++....  .+++....+|+.+++.||+|||.. .++|||||||+.|||+|.+ ...||+|||+|+.... .
T Consensus       153 ym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~-~~aKlsDFGLa~~~~~~~  231 (361)
T KOG1187|consen  153 YMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDED-FNAKLSDFGLAKLGPEGD  231 (361)
T ss_pred             ccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCC-CCEEccCccCcccCCccc
Confidence            789999999997654  899999999999999999999985 4589999999999999987 6999999999976654 3


Q ss_pred             CCcccc-cCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCC-----ChHHH-HHHhhcCCCCCccc----
Q 010730           77 QQAHSV-IGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECS-----NPAQI-YKKVTSGKLPGAFH----  144 (502)
Q Consensus        77 ~~~~s~-vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~-----~~~ql-~~kI~~g~~p~~~~----  144 (502)
                      ....+. .||.+|+|||.+. +..+.++|||||||+|+||+||+.|.....     +...+ ...+..+.+.....    
T Consensus       232 ~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~  311 (361)
T KOG1187|consen  232 TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLK  311 (361)
T ss_pred             cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCcc
Confidence            333333 8999999999775 679999999999999999999998876421     12222 22333333221111    


Q ss_pred             -cccc--HH---HHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          145 -RIQD--AE---ARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       145 -~~~s--~~---l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                       ....  ..   +..+..+|+. +|.+||++.|++..
T Consensus       312 ~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~  348 (361)
T KOG1187|consen  312 EGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKE  348 (361)
T ss_pred             CCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHH
Confidence             1111  23   3445567998 99999999997653


No 380
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.89  E-value=3.4e-23  Score=200.52  Aligned_cols=168  Identities=23%  Similarity=0.420  Sum_probs=138.1

Q ss_pred             HHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccccCCCcccC
Q 010730           11 RKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMA   90 (502)
Q Consensus        11 i~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~vGTp~Y~A   90 (502)
                      .+=++.|+...++.++.|||.||.|||++|  |+|||+||.|++++....+++|+|.|+|.+...+....-.+.+..|--
T Consensus       123 k~ly~tl~d~dIryY~~elLkALdyCHS~G--ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKG  200 (338)
T KOG0668|consen  123 KQLYPTLTDYDIRYYIYELLKALDYCHSMG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG  200 (338)
T ss_pred             HHHhhhhchhhHHHHHHHHHHHHhHHHhcC--cccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeehhhcCC
Confidence            334567888999999999999999999999  999999999999998777899999999999888777777788999999


Q ss_pred             ccccc--cCCCCcccchhHHHHHHHHhhccCCCC-CCCChHHHHHHhhc--------------CCCC-------------
Q 010730           91 PELYE--EDYNELVDIYSFGMCVLEMLTSEYPYS-ECSNPAQIYKKVTS--------------GKLP-------------  140 (502)
Q Consensus        91 PEvl~--~~ys~~~DIWSLGviLyeLLTG~~Pf~-~~~~~~ql~~kI~~--------------g~~p-------------  140 (502)
                      ||++-  ..|+.+.|+|||||++..|+..+-||. +.+|.+|+.+...-              -.++             
T Consensus       201 PELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk  280 (338)
T KOG0668|consen  201 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRK  280 (338)
T ss_pred             chheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccc
Confidence            99875  458999999999999999999888875 45677776443210              0011             


Q ss_pred             -------CcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          141 -------GAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       141 -------~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                             ..-....++++.+|+.++|. |..+|+||+|++.||||...
T Consensus       281 ~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~  328 (338)
T KOG0668|consen  281 PWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV  328 (338)
T ss_pred             cHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence                   11122347899999999998 99999999999999999743


No 381
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.89  E-value=1.4e-23  Score=230.49  Aligned_cols=171  Identities=27%  Similarity=0.422  Sum_probs=130.3

Q ss_pred             CCCcHHHHHHhC-CCCCH---HHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCC----CCcEEEEecCCceecc
Q 010730            3 TSGTLREYRKKY-TRVDI---RAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGH----LGQIKIGDLGLAAILR   74 (502)
Q Consensus         3 tgGsL~~yi~k~-~~L~e---~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~----~g~vKL~DFGlA~~~~   74 (502)
                      +..+|.+|+... ..+..   -..+..+.|++.||++||+.+  ||||||||.||||...    ...++|.|||+++.+.
T Consensus       585 C~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~--iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~  662 (903)
T KOG1027|consen  585 CACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK--IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA  662 (903)
T ss_pred             hhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc--cccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence            456899999874 21111   345778999999999999988  9999999999999762    2468999999999886


Q ss_pred             CCCC----cccccCCCcccCccccccC-CCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCC-Ccccccc
Q 010730           75 GSQQ----AHSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLP-GAFHRIQ  147 (502)
Q Consensus        75 ~~~~----~~s~vGTp~Y~APEvl~~~-ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p-~~~~~~~  147 (502)
                      .+..    .....||-+|+|||++... -..++||+||||++|+.++ |..||.+  +.+.-. .|..+... ..+....
T Consensus       663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd--~~~R~~-NIl~~~~~L~~L~~~~  739 (903)
T KOG1027|consen  663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGD--SLERQA-NILTGNYTLVHLEPLP  739 (903)
T ss_pred             CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCc--hHHhhh-hhhcCccceeeeccCc
Confidence            5432    3456799999999998653 5668999999999999999 5999954  222211 23333331 1222223


Q ss_pred             cHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCc
Q 010730          148 DAEARRFVGKCLE-NVSKRLPAKELLLDPFLA  178 (502)
Q Consensus       148 s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~  178 (502)
                      +.++++||.+||. +|..||+|.++|.||||=
T Consensus       740 d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW  771 (903)
T KOG1027|consen  740 DCEAKDLISRMLNPDPQLRPSATDVLNHPLFW  771 (903)
T ss_pred             hHHHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence            3389999999999 999999999999999984


No 382
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.89  E-value=6.5e-23  Score=233.06  Aligned_cols=167  Identities=20%  Similarity=0.400  Sum_probs=140.6

Q ss_pred             CCCCCcHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceec
Q 010730            1 MFTSGTLREYRKKY-------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAIL   73 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~   73 (502)
                      ||.||+|..||++.       ..+..+.+..++.||++|..||++++  +|||||-+.|+|++.. ..|||+|||+|+.+
T Consensus       776 yM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~--fvHRDLAaRNCLL~~~-r~VKIaDFGlArDi  852 (1025)
T KOG1095|consen  776 YMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH--FVHRDLAARNCLLDER-RVVKIADFGLARDI  852 (1025)
T ss_pred             hcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC--CcCcchhhhheeeccc-CcEEEcccchhHhh
Confidence            79999999999876       34999999999999999999999998  9999999999999988 68999999999854


Q ss_pred             cCCCCccccc--C--CCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccc
Q 010730           74 RGSQQAHSVI--G--TPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQ  147 (502)
Q Consensus        74 ~~~~~~~s~v--G--Tp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~  147 (502)
                      .... .+..-  +  ...|||||.+. +.++.++|||||||+|||++| |..||.+..|.+-+..-...|++  ..+..+
T Consensus       853 y~~~-yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL--~~P~~C  929 (1025)
T KOG1095|consen  853 YDKD-YYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRL--DPPSYC  929 (1025)
T ss_pred             hhch-heeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCcc--CCCCCC
Confidence            3221 11111  1  24799999876 679999999999999999999 99999986666555556666766  445667


Q ss_pred             cHHHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          148 DAEARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       148 s~~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      +..+.+++..||. +|.+||++..|++
T Consensus       930 P~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  930 PEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             ChHHHHHHHHHccCChhhCccHHHHHh
Confidence            7888999999999 9999999999887


No 383
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.88  E-value=2.8e-23  Score=205.07  Aligned_cols=171  Identities=29%  Similarity=0.440  Sum_probs=133.7

Q ss_pred             cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC--Cccccc
Q 010730            6 TLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ--QAHSVI   83 (502)
Q Consensus         6 sL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~--~~~s~v   83 (502)
                      +|.+.|-.-..++...++-++.|||.||.|||+.+  |.||||||.|+|++.| -.+||+|||+++......  .+...+
T Consensus       142 DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~--ILHRDIKPGNLLVNSN-CvLKICDFGLARvee~d~~~hMTqEV  218 (449)
T KOG0664|consen  142 DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTAN--ILHRDIKPGNLLVNSN-CILKICDFGLARTWDQRDRLNMTHEV  218 (449)
T ss_pred             hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcc--hhhccCCCccEEeccC-ceEEecccccccccchhhhhhhHHHH
Confidence            56666666678999999999999999999999998  9999999999999998 589999999998765433  344567


Q ss_pred             CCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhh------------------------cC
Q 010730           84 GTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVT------------------------SG  137 (502)
Q Consensus        84 GTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~------------------------~g  137 (502)
                      -|-+|.|||++.+  .|+.++||||+|||+.|||..+..|.. .++.+..+.|.                        .+
T Consensus       219 VTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA-q~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~  297 (449)
T KOG0664|consen  219 VTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA-AGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAG  297 (449)
T ss_pred             HHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc-cChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccC
Confidence            7999999998865  499999999999999999999999876 34433333222                        11


Q ss_pred             CCCCcccc---cc-----cHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          138 KLPGAFHR---IQ-----DAEARRFVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       138 ~~p~~~~~---~~-----s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      ..++.++.   +.     ..+...++.++|. +|.+|++..+++.|+++...
T Consensus       298 ~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~  349 (449)
T KOG0664|consen  298 LRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG  349 (449)
T ss_pred             CCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence            12222222   22     2456777788888 99999999999999998644


No 384
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.88  E-value=6.2e-23  Score=219.17  Aligned_cols=169  Identities=21%  Similarity=0.362  Sum_probs=141.8

Q ss_pred             CCCCCcHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKYTR-VDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~-L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.||+|.+|+++.+. ++..+...++.+.+.||+|||+++  +|||||-..|+|+..+ +.+||+|||+++.-......
T Consensus       242 l~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~--~IHRDIAARNcL~~~~-~~vKISDFGLs~~~~~~~~~  318 (474)
T KOG0194|consen  242 LCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKN--CIHRDIAARNCLYSKK-GVVKISDFGLSRAGSQYVMK  318 (474)
T ss_pred             ecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCC--CcchhHhHHHheecCC-CeEEeCccccccCCcceeec
Confidence            6889999999999874 999999999999999999999999  9999999999999886 57899999998754321111


Q ss_pred             ccc-cCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHH
Q 010730           80 HSV-IGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVG  156 (502)
Q Consensus        80 ~s~-vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~  156 (502)
                      ... .-...|+|||.+. +.|+.++|||||||++||+.+ |..||.+ ....++..+|....++...+...+..+..++.
T Consensus       319 ~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g-~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~  397 (474)
T KOG0194|consen  319 KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPG-MKNYEVKAKIVKNGYRMPIPSKTPKELAKVMK  397 (474)
T ss_pred             cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCC-CCHHHHHHHHHhcCccCCCCCCCHHHHHHHHH
Confidence            111 2346799999886 569999999999999999999 8999988 55668888885555555666677889999999


Q ss_pred             Hhhh-CcCCCCCHHHHhc
Q 010730          157 KCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       157 kcL~-dP~kRpSa~ELL~  173 (502)
                      +|+. +|.+|+++.++.+
T Consensus       398 ~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  398 QCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             HhccCChhhccCHHHHHH
Confidence            9998 9999999988776


No 385
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.87  E-value=3.5e-22  Score=220.74  Aligned_cols=168  Identities=25%  Similarity=0.421  Sum_probs=141.8

Q ss_pred             CCCCCcHHHHHHhCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEe
Q 010730            1 MFTSGTLREYRKKYT--------------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGD   66 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~--------------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~D   66 (502)
                      ||.-|+|.+|+.-..              +|+..+...++.||+.|++||-++.  +|||||-..|+||..+ -.|||+|
T Consensus       570 Ym~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~--FVHRDLATRNCLVge~-l~VKIsD  646 (774)
T KOG1026|consen  570 YMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH--FVHRDLATRNCLVGEN-LVVKISD  646 (774)
T ss_pred             ecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc--ccccchhhhhceeccc-eEEEecc
Confidence            788999999996432              2888999999999999999999998  9999999999999988 4899999


Q ss_pred             cCCceeccCCCCcc---cccCCCcccCcc-ccccCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCC
Q 010730           67 LGLAAILRGSQQAH---SVIGTPEFMAPE-LYEEDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPG  141 (502)
Q Consensus        67 FGlA~~~~~~~~~~---s~vGTp~Y~APE-vl~~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~  141 (502)
                      ||+++.+....-.+   ...=...||+|| ++.++|++++||||+||+|||+++ |.-||.+..| .++.+.|.+|.. -
T Consensus       647 fGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn-~EVIe~i~~g~l-L  724 (774)
T KOG1026|consen  647 FGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN-QEVIECIRAGQL-L  724 (774)
T ss_pred             cccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch-HHHHHHHHcCCc-c
Confidence            99998764321111   112246899999 567899999999999999999999 9999998666 566778888887 4


Q ss_pred             cccccccHHHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          142 AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       142 ~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      .-+..++.++.+|+..||. +|.+||+++||-.
T Consensus       725 ~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~  757 (774)
T KOG1026|consen  725 SCPENCPTEVYSLMLECWNENPKRRPSFKEIHS  757 (774)
T ss_pred             cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            5677788999999999999 9999999998753


No 386
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.86  E-value=5.1e-22  Score=189.95  Aligned_cols=128  Identities=31%  Similarity=0.504  Sum_probs=110.8

Q ss_pred             HHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccccCCCcccC
Q 010730           11 RKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMA   90 (502)
Q Consensus        11 i~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~vGTp~Y~A   90 (502)
                      +++.+.++|..+-+++..|+.||.|||++- .|||||+||+|||++.. |+||+||||++..+..+.....-.|.-.|||
T Consensus       139 ~~~g~~ipE~vlGkIa~Svv~al~~L~~kL-~vIHRDvKPsNiLIn~~-GqVKiCDFGIsG~L~dSiAkt~daGCkpYma  216 (282)
T KOG0984|consen  139 LKKGGTIPEDVLGKIAVSVVHALEFLHSKL-SVIHRDVKPSNILINYD-GQVKICDFGISGYLVDSIAKTMDAGCKPYMA  216 (282)
T ss_pred             HhcCCcCchHHhhHhHHHHHHHHHHHHHHh-hhhhccCCcceEEEccC-CcEEEcccccceeehhhhHHHHhcCCCccCC
Confidence            356678999999999999999999999872 49999999999999987 8999999999988766544333568889999


Q ss_pred             ccccc-----cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCC
Q 010730           91 PELYE-----EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLP  140 (502)
Q Consensus        91 PEvl~-----~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p  140 (502)
                      ||.+.     ..|+.++||||||+++.||.++++||..+..+.+..+++.....|
T Consensus       217 PEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~P  271 (282)
T KOG0984|consen  217 PERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPSP  271 (282)
T ss_pred             hhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCCC
Confidence            99874     259999999999999999999999999999998888888776544


No 387
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.86  E-value=6.6e-22  Score=214.77  Aligned_cols=121  Identities=31%  Similarity=0.513  Sum_probs=109.5

Q ss_pred             CCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeC-CCCc--EEEEecCCceecc
Q 010730            1 MFTSGTLREYRKK---YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNG-HLGQ--IKIGDLGLAAILR   74 (502)
Q Consensus         1 ~~tgGsL~~yi~k---~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~-~~g~--vKL~DFGlA~~~~   74 (502)
                      |+.||+|+.++.+   ...|++.+++.++..+..||.|||.+|  |+||||||+||++-. ..|+  -||+|||.|+.+.
T Consensus        98 yC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~--IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~  175 (732)
T KOG4250|consen   98 YCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG--IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELD  175 (732)
T ss_pred             ecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCcEEEeecCCCceEEeeecccccccCC
Confidence            7899999999964   456999999999999999999999999  999999999998742 2233  5999999999999


Q ss_pred             CCCCcccccCCCcccCccccc--cCCCCcccchhHHHHHHHHhhccCCCCC
Q 010730           75 GSQQAHSVIGTPEFMAPELYE--EDYNELVDIYSFGMCVLEMLTSEYPYSE  123 (502)
Q Consensus        75 ~~~~~~s~vGTp~Y~APEvl~--~~ys~~~DIWSLGviLyeLLTG~~Pf~~  123 (502)
                      ++....+++||+.|.+||+++  ..|+.-+|.|||||++|+.+||..||--
T Consensus       176 d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p  226 (732)
T KOG4250|consen  176 DNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP  226 (732)
T ss_pred             CCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence            888899999999999999998  5699999999999999999999999954


No 388
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.85  E-value=6.7e-21  Score=211.43  Aligned_cols=170  Identities=25%  Similarity=0.378  Sum_probs=142.6

Q ss_pred             CCCCCcHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEE
Q 010730            1 MFTSGTLREYRKKYT----------------RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKI   64 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~----------------~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL   64 (502)
                      |+..|+|.+|+++.+                .+....+..++.||+.|++||++..  +|||||-+.|||+..+ ..+||
T Consensus       383 y~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~--~vHRDLAaRNVLi~~~-~~~kI  459 (609)
T KOG0200|consen  383 YAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP--CVHRDLAARNVLITKN-KVIKI  459 (609)
T ss_pred             eccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC--ccchhhhhhhEEecCC-CEEEE
Confidence            577899999998765                3889999999999999999999988  9999999999999987 58999


Q ss_pred             EecCCceeccCCCCc--ccccCC--CcccCcccccc-CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCC
Q 010730           65 GDLGLAAILRGSQQA--HSVIGT--PEFMAPELYEE-DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGK  138 (502)
Q Consensus        65 ~DFGlA~~~~~~~~~--~s~vGT--p~Y~APEvl~~-~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~  138 (502)
                      +|||+|+........  ....|+  ..|||||.+.. .|+.++||||||++|||+.| |..||++......+++.+..|.
T Consensus       460 aDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~  539 (609)
T KOG0200|consen  460 ADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGN  539 (609)
T ss_pred             ccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCC
Confidence            999999865443222  112222  34999998764 69999999999999999999 9999998666778888888887


Q ss_pred             CCCcccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          139 LPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       139 ~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      .. ..+..++.++.+++..||. +|.+||+..++...
T Consensus       540 r~-~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~  575 (609)
T KOG0200|consen  540 RM-EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEF  575 (609)
T ss_pred             CC-CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            64 3445568999999999998 99999999888763


No 389
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.83  E-value=5.1e-21  Score=204.85  Aligned_cols=167  Identities=26%  Similarity=0.455  Sum_probs=138.5

Q ss_pred             CCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKYT-RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~-~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      +++-|.|+.|++..+ .|+...+..|+.||..+|.|||+..  +|||||...|||+... ..|||+|||+++.+....-.
T Consensus       471 L~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkr--fVHRDIAaRNiLVsSp-~CVKLaDFGLSR~~ed~~yY  547 (974)
T KOG4257|consen  471 LAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKR--FVHRDIAARNILVSSP-QCVKLADFGLSRYLEDDAYY  547 (974)
T ss_pred             cccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhc--hhhhhhhhhheeecCc-ceeeecccchhhhccccchh
Confidence            456799999998764 5999999999999999999999998  9999999999999987 58999999999988765433


Q ss_pred             ccccC--CCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHH
Q 010730           80 HSVIG--TPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFV  155 (502)
Q Consensus        80 ~s~vG--Tp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI  155 (502)
                      +...|  ..-|||||-+. ..++.++|||-||||+||++. |.-||.+-.|.+-|. .+.+|..+ +.+..+++.+..++
T Consensus       548 kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~-~iEnGeRl-P~P~nCPp~LYslm  625 (974)
T KOG4257|consen  548 KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG-HIENGERL-PCPPNCPPALYSLM  625 (974)
T ss_pred             hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEE-EecCCCCC-CCCCCCChHHHHHH
Confidence            33333  45699999776 679999999999999999988 999999866655443 44555443 45667789999999


Q ss_pred             HHhhh-CcCCCCCHHHHh
Q 010730          156 GKCLE-NVSKRLPAKELL  172 (502)
Q Consensus       156 ~kcL~-dP~kRpSa~ELL  172 (502)
                      .+||. +|.+||.+.||.
T Consensus       626 skcWayeP~kRPrftei~  643 (974)
T KOG4257|consen  626 SKCWAYEPSKRPRFTEIK  643 (974)
T ss_pred             HHHhccCcccCCcHHHHH
Confidence            99999 999999977654


No 390
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.83  E-value=9.5e-21  Score=195.92  Aligned_cols=161  Identities=29%  Similarity=0.498  Sum_probs=122.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC--------------CC---
Q 010730           16 RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS--------------QQ---   78 (502)
Q Consensus        16 ~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~--------------~~---   78 (502)
                      .++...++.|++.++.||.++|.+|  ||||||||.|+|.+...++-.|+|||+|......              ..   
T Consensus       128 ~l~~~~i~~Yl~~ll~Al~~~h~~G--IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g  205 (418)
T KOG1167|consen  128 SLSLAEIRWYLRNLLKALAHLHKNG--IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMG  205 (418)
T ss_pred             cCCHHHHHHHHHHHHHHhhhhhccC--ccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCcccc
Confidence            4778999999999999999999999  9999999999999988888999999999621100              00   


Q ss_pred             ----------------------------cccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCCh-
Q 010730           79 ----------------------------AHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNP-  127 (502)
Q Consensus        79 ----------------------------~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~-  127 (502)
                                                  .....|||+|.|||++..  ..++++||||.|||++-++++.+||....+. 
T Consensus       206 ~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~  285 (418)
T KOG1167|consen  206 KDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDA  285 (418)
T ss_pred             CcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCcccc
Confidence                                        012469999999998863  4788999999999999999999999643221 


Q ss_pred             ---HHHH--------HHh--hcCC-------------------------------C----CCcccccccHHHHHHHHHhh
Q 010730          128 ---AQIY--------KKV--TSGK-------------------------------L----PGAFHRIQDAEARRFVGKCL  159 (502)
Q Consensus       128 ---~ql~--------~kI--~~g~-------------------------------~----p~~~~~~~s~~l~~LI~kcL  159 (502)
                         .++.        ++.  ..|.                               .    ...+....+..+.+|+.+||
T Consensus       286 ~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~l  365 (418)
T KOG1167|consen  286 DALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCL  365 (418)
T ss_pred             chHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHc
Confidence               1110        000  0011                               0    00112223557899999999


Q ss_pred             h-CcCCCCCHHHHhcCCCCc
Q 010730          160 E-NVSKRLPAKELLLDPFLA  178 (502)
Q Consensus       160 ~-dP~kRpSa~ELL~hPff~  178 (502)
                      . ||.+|+||+++|+||||.
T Consensus       366 e~np~kRitAEeALkHpFF~  385 (418)
T KOG1167|consen  366 ELNPQKRITAEDALKHPFFD  385 (418)
T ss_pred             cCChhhcccHHHHhcCcCCc
Confidence            9 999999999999999997


No 391
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.83  E-value=1.7e-20  Score=216.94  Aligned_cols=166  Identities=22%  Similarity=0.356  Sum_probs=121.3

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGH-DPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~-g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.+|+|.+++++   +++..+..++.||+.||+|||.+ .++|+||||||+||+++.+ +..++. ||.......   .
T Consensus       764 y~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~-~~~~~~-~~~~~~~~~---~  835 (968)
T PLN00113        764 YIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGK-DEPHLR-LSLPGLLCT---D  835 (968)
T ss_pred             CCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCC-CceEEE-ecccccccc---C
Confidence            6889999999963   88999999999999999999954 3459999999999999876 466664 665543321   1


Q ss_pred             ccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCC----ChHHHHHHhhc---------CCCCC--cc
Q 010730           80 HSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECS----NPAQIYKKVTS---------GKLPG--AF  143 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~----~~~ql~~kI~~---------g~~p~--~~  143 (502)
                      ....||+.|+|||++.+ .|+.++|||||||++|||+||+.||....    ...++.+....         .....  ..
T Consensus       836 ~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  915 (968)
T PLN00113        836 TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSV  915 (968)
T ss_pred             CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCc
Confidence            23478999999998764 59999999999999999999999985321    11122111110         00100  01


Q ss_pred             cccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          144 HRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       144 ~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      ......++.+++.+||. +|.+||++.|+++.
T Consensus       916 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        916 NQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             cHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            11112356788899998 99999999999986


No 392
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.83  E-value=7.3e-21  Score=205.18  Aligned_cols=177  Identities=29%  Similarity=0.493  Sum_probs=149.7

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC-CCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~-~~~   79 (502)
                      |+-||+|.+.-.-.+++++.++...++..+.||+|||+++  -+|||||-.||+++.. |.+|++|||++..+... .+.
T Consensus        93 ycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~g--k~hRdiKGanilltd~-gDvklaDfgvsaqitati~Kr  169 (829)
T KOG0576|consen   93 YCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQG--KIHRDIKGANILLTDE-GDVKLADFGVSAQITATIAKR  169 (829)
T ss_pred             ecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCC--cccccccccceeeccc-CceeecccCchhhhhhhhhhh
Confidence            6778999998888899999999999999999999999998  8999999999999987 89999999999876543 345


Q ss_pred             ccccCCCcccCcccc----ccCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCccc--ccccHHHHH
Q 010730           80 HSVIGTPEFMAPELY----EEDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFH--RIQDAEARR  153 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl----~~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~--~~~s~~l~~  153 (502)
                      ++++|||+|||||+-    .+.|+..+|||++|+...|+.--++|.........++-.-.++..|+.+.  ...++.+-+
T Consensus       170 ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~  249 (829)
T KOG0576|consen  170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHN  249 (829)
T ss_pred             hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHH
Confidence            789999999999975    36799999999999999999999999776544455555555555443332  234788999


Q ss_pred             HHHHhhh-CcCCCCCHHHHhcCCCCcCC
Q 010730          154 FVGKCLE-NVSKRLPAKELLLDPFLASD  180 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~hPff~~~  180 (502)
                      |++.+|. +|++||+++.+|.|||+...
T Consensus       250 fvK~altknpKkRptaeklL~h~fvs~~  277 (829)
T KOG0576|consen  250 FVKGALTKNPKKRPTAEKLLQHPFVSQT  277 (829)
T ss_pred             HHHHHhcCCCccCCChhhheeceeeccc
Confidence            9999998 99999999999999999654


No 393
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.82  E-value=3.7e-20  Score=198.04  Aligned_cols=168  Identities=23%  Similarity=0.372  Sum_probs=140.7

Q ss_pred             CCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKYT--RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~--~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      ||+-|+|.+|+++..  .++.-.+..++.||.+|++||...+  +|||||-..|+|+..+ ..||++||||++.+....-
T Consensus       344 fM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn--FIHRDLAARNCLVgEn-hiVKvADFGLsRlMtgDTY  420 (1157)
T KOG4278|consen  344 FMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGEN-HIVKVADFGLSRLMTGDTY  420 (1157)
T ss_pred             cccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh--hhhhhhhhhhcccccc-ceEEeeccchhhhhcCCce
Confidence            799999999998754  4777788899999999999999999  9999999999999887 5899999999998865432


Q ss_pred             c-c-cccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           79 A-H-SVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        79 ~-~-s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      . + ...-..-|.|||-+. ..++.++|||+|||+|||+.| |..||++ .+..++|..+..|-. ...+.-+++.+.+|
T Consensus       421 TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG-idlSqVY~LLEkgyR-M~~PeGCPpkVYeL  498 (1157)
T KOG4278|consen  421 TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYGLLEKGYR-MDGPEGCPPKVYEL  498 (1157)
T ss_pred             ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC-ccHHHHHHHHhcccc-ccCCCCCCHHHHHH
Confidence            1 1 112245799999775 569999999999999999999 9999988 678889988776643 24455678899999


Q ss_pred             HHHhhh-CcCCCCCHHHHhc
Q 010730          155 VGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~  173 (502)
                      +..||+ .|..||+++|+-+
T Consensus       499 MraCW~WsPsDRPsFaeiHq  518 (1157)
T KOG4278|consen  499 MRACWNWSPSDRPSFAEIHQ  518 (1157)
T ss_pred             HHHHhcCCcccCccHHHHHH
Confidence            999999 9999999887654


No 394
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.82  E-value=4.6e-20  Score=193.56  Aligned_cols=118  Identities=27%  Similarity=0.396  Sum_probs=78.5

Q ss_pred             EEEecCCceeccCCCCcccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCC------CChH---HHHH
Q 010730           63 KIGDLGLAAILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSEC------SNPA---QIYK  132 (502)
Q Consensus        63 KL~DFGlA~~~~~~~~~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~------~~~~---ql~~  132 (502)
                      ||+|||-|.+...  ....-+.|..|.||||+- ..|++.+||||++|++|||+||.+.|.--      .+.+   .|..
T Consensus       394 KIaDlGNACW~~k--hFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~E  471 (590)
T KOG1290|consen  394 KIADLGNACWVHK--HFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIME  471 (590)
T ss_pred             EEeeccchhhhhh--hhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHH
Confidence            4444444444321  122345688999999775 56999999999999999999999998421      1111   2211


Q ss_pred             --------HhhcCCCCC----------------------------cccccccHHHHHHHHHhhh-CcCCCCCHHHHhcCC
Q 010730          133 --------KVTSGKLPG----------------------------AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDP  175 (502)
Q Consensus       133 --------kI~~g~~p~----------------------------~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~hP  175 (502)
                              .+..|+...                            .|+.-...++.+|+.-||+ +|.+|+||.++|+||
T Consensus       472 LLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hP  551 (590)
T KOG1290|consen  472 LLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHP  551 (590)
T ss_pred             HHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCc
Confidence                    112222110                            1111234568899999999 999999999999999


Q ss_pred             CCcCCCC
Q 010730          176 FLASDAG  182 (502)
Q Consensus       176 ff~~~~~  182 (502)
                      ||.....
T Consensus       552 wLn~~~~  558 (590)
T KOG1290|consen  552 WLNPVAG  558 (590)
T ss_pred             cccCCCC
Confidence            9986544


No 395
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.82  E-value=1.3e-20  Score=208.43  Aligned_cols=177  Identities=24%  Similarity=0.477  Sum_probs=141.5

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC----
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS----   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~----   76 (502)
                      |+.+ +|+.++...+.+....+..+++||+.||+|+|.+|  |.||||||+|+++..+ |.+||+|||.+..+...    
T Consensus       402 ~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~G--iahrdlK~enll~~~~-g~lki~Dfg~~~vf~~~~e~~  477 (601)
T KOG0590|consen  402 YCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMG--LAHRDLKLENLLVTEN-GILKIIDFGAASVFRYPWEKN  477 (601)
T ss_pred             cccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcC--ceeccCccccEEEecC-CceEEeecCcceeeccCcchh
Confidence            4556 89999998888999999999999999999999999  9999999999999987 79999999999765422    


Q ss_pred             -CCcccccCCCcccCcccccc-CCCC-cccchhHHHHHHHHhhccCCCCCCCChHHHH-HHhhcCCC-----CCcccccc
Q 010730           77 -QQAHSVIGTPEFMAPELYEE-DYNE-LVDIYSFGMCVLEMLTSEYPYSECSNPAQIY-KKVTSGKL-----PGAFHRIQ  147 (502)
Q Consensus        77 -~~~~s~vGTp~Y~APEvl~~-~ys~-~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~-~kI~~g~~-----p~~~~~~~  147 (502)
                       .....++|+..|+|||++.+ .|.+ .+||||.|++++.|++|+.||.-....++.+ ......+.     +..+....
T Consensus       478 ~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  557 (601)
T KOG0590|consen  478 IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLL  557 (601)
T ss_pred             hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhc
Confidence             22356789999999998864 4654 6899999999999999999996543333322 11111111     12334445


Q ss_pred             cHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcCCC
Q 010730          148 DAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDA  181 (502)
Q Consensus       148 s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~~~  181 (502)
                      +.+.+.+|.+||+ +|.+|.|+++||+++||+...
T Consensus       558 p~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  558 PRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             hhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence            7788999999999 999999999999999998643


No 396
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.81  E-value=4.8e-20  Score=192.98  Aligned_cols=167  Identities=29%  Similarity=0.510  Sum_probs=127.1

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-------CCCCeEecCCCCCcEEEeCCCCcEEEEecCCceec
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHG-------HDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAIL   73 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs-------~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~   73 (502)
                      |...|+|-+|++.+ .++.....+++..|..||+|||.       ++|+|+|||||..|||+..+ ...-|+|||+|-.+
T Consensus       289 fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D-lTccIaDFGLAl~~  366 (534)
T KOG3653|consen  289 FHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKND-LTCCIADFGLALRL  366 (534)
T ss_pred             eccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccC-CcEEeeccceeEEe
Confidence            45789999999875 48999999999999999999994       56789999999999999877 79999999999887


Q ss_pred             cCCC---CcccccCCCcccCccccccCCC-------CcccchhHHHHHHHHhhccCC------------CCC----CCCh
Q 010730           74 RGSQ---QAHSVIGTPEFMAPELYEEDYN-------ELVDIYSFGMCVLEMLTSEYP------------YSE----CSNP  127 (502)
Q Consensus        74 ~~~~---~~~s~vGTp~Y~APEvl~~~ys-------~~~DIWSLGviLyeLLTG~~P------------f~~----~~~~  127 (502)
                      ....   .+...+||..|||||++++..+       ...||||+|.+||||++...-            |..    ....
T Consensus       367 ~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~  446 (534)
T KOG3653|consen  367 EPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTL  446 (534)
T ss_pred             cCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCH
Confidence            6443   3455899999999999987532       258999999999999885422            210    1223


Q ss_pred             HHHHHHhhcCC----CCCccccc-ccHHHHHHHHHhhh-CcCCCCCHH
Q 010730          128 AQIYKKVTSGK----LPGAFHRI-QDAEARRFVGKCLE-NVSKRLPAK  169 (502)
Q Consensus       128 ~ql~~kI~~g~----~p~~~~~~-~s~~l~~LI~kcL~-dP~kRpSa~  169 (502)
                      +++...+...+    +|..|... -...+++.+.-||+ |+..|+||.
T Consensus       447 e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~  494 (534)
T KOG3653|consen  447 EEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG  494 (534)
T ss_pred             HHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence            34444443332    23223222 23568899999999 999999964


No 397
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.81  E-value=3.1e-19  Score=163.35  Aligned_cols=139  Identities=34%  Similarity=0.618  Sum_probs=120.6

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-C
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-Q   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~   78 (502)
                      ++.|++|.+++... ..++...+..++.+++.+|.|||..+  ++|+||+|.||+++...+.++|+|||.+....... .
T Consensus        72 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~  149 (215)
T cd00180          72 YCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSL  149 (215)
T ss_pred             cCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcch
Confidence            35679999999876 57999999999999999999999998  99999999999999822689999999998764432 1


Q ss_pred             cccccCCCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHH
Q 010730           79 AHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVG  156 (502)
Q Consensus        79 ~~s~vGTp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~  156 (502)
                      .....+...|++||.+..  .++.+.|+|++|+++++|                                  ..+.+++.
T Consensus       150 ~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------~~~~~~l~  195 (215)
T cd00180         150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------PELKDLIR  195 (215)
T ss_pred             hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------HHHHHHHH
Confidence            334568899999998865  678899999999999999                                  57899999


Q ss_pred             Hhhh-CcCCCCCHHHHhcCC
Q 010730          157 KCLE-NVSKRLPAKELLLDP  175 (502)
Q Consensus       157 kcL~-dP~kRpSa~ELL~hP  175 (502)
                      +|+. +|.+||++.+++.++
T Consensus       196 ~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         196 KMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HHhhCCcccCcCHHHHhhCC
Confidence            9998 999999999999874


No 398
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.80  E-value=1.9e-19  Score=197.58  Aligned_cols=169  Identities=27%  Similarity=0.456  Sum_probs=143.1

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      ||..|+|.+|++.+ ..+..+....|..||++|+.|||.+.  ++||||-..|||+... ..|||.|||+++.+......
T Consensus       778 ~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qr--lVHrdLaaRNVLVksP-~hvkitdfgla~ll~~d~~e  854 (1177)
T KOG1025|consen  778 LMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQR--LVHRDLAARNVLVKSP-NHVKITDFGLAKLLAPDEKE  854 (1177)
T ss_pred             hcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcc--hhhhhhhhhheeecCC-CeEEEEecchhhccCccccc
Confidence            68899999999875 46999999999999999999999998  9999999999999876 69999999999988655443


Q ss_pred             cccc---CCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHH
Q 010730           80 HSVI---GTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRF  154 (502)
Q Consensus        80 ~s~v---GTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~L  154 (502)
                      ....   -.+-|||-|.+. ..|..++|||||||++||++| |.-||.+ ...++|-+.+..|.. -..+.+.+.++..+
T Consensus       855 y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~g-i~~~eI~dlle~geR-LsqPpiCtiDVy~~  932 (1177)
T KOG1025|consen  855 YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDG-IPAEEIPDLLEKGER-LSQPPICTIDVYMV  932 (1177)
T ss_pred             ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCC-CCHHHhhHHHhcccc-CCCCCCccHHHHHH
Confidence            3322   246789999664 679999999999999999999 9999987 455677666666654 45677888999999


Q ss_pred             HHHhhh-CcCCCCCHHHHhcC
Q 010730          155 VGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       155 I~kcL~-dP~kRpSa~ELL~h  174 (502)
                      +.+||. |+..||+++++...
T Consensus       933 mvkCwmid~~~rp~fkel~~~  953 (1177)
T KOG1025|consen  933 MVKCWMIDADSRPTFKELAEE  953 (1177)
T ss_pred             HHHHhccCcccCccHHHHHHH
Confidence            999998 99999999887753


No 399
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.80  E-value=1.3e-19  Score=196.26  Aligned_cols=172  Identities=22%  Similarity=0.379  Sum_probs=144.5

Q ss_pred             CCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKK--YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k--~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      |++.|+|.+-+.+  ...|-...+..|+.||+.|+.||.+++  +|||||-..|||+... ..|||+||||.+-+.....
T Consensus       191 LaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr--lvHRDLAARNlllasp-rtVKI~DFGLmRaLg~ned  267 (1039)
T KOG0199|consen  191 LAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR--LVHRDLAARNLLLASP-RTVKICDFGLMRALGENED  267 (1039)
T ss_pred             hcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh--hhhhhhhhhhheeccc-ceeeeecccceeccCCCCc
Confidence            4678999999987  345888999999999999999999998  9999999999999875 5899999999998876655


Q ss_pred             ccccc----CCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHH
Q 010730           79 AHSVI----GTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEAR  152 (502)
Q Consensus        79 ~~s~v----GTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~  152 (502)
                      .+..-    -...|.|||.+. ++++.++|+|++||++|||+| |+-||.+ -+..+|.++|..+..- ..+..++..+.
T Consensus       268 ~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G-~~g~qIL~~iD~~erL-pRPk~csedIY  345 (1039)
T KOG0199|consen  268 MYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVG-CRGIQILKNIDAGERL-PRPKYCSEDIY  345 (1039)
T ss_pred             ceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCC-CCHHHHHHhccccccC-CCCCCChHHHH
Confidence            44322    245699999875 679999999999999999999 9999988 5678888888865442 34566789999


Q ss_pred             HHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          153 RFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       153 ~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      +++..||. +|.+|||+..|.++-++
T Consensus       346 ~imk~cWah~paDRptFsair~~~~l  371 (1039)
T KOG0199|consen  346 QIMKNCWAHNPADRPTFSAIREDLVL  371 (1039)
T ss_pred             HHHHHhccCCccccccHHHHHHhHHH
Confidence            99999999 99999999888655443


No 400
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.80  E-value=2.9e-19  Score=186.08  Aligned_cols=171  Identities=30%  Similarity=0.490  Sum_probs=129.0

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh------CCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHG------HDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR   74 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs------~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~   74 (502)
                      |-+.|+|++|+.+ ..++.+...+++..+++||++||.      .+|.|.|||||..|||+..+ +..-|+|+|||....
T Consensus       290 YHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn-~~C~IADLGLAv~h~  367 (513)
T KOG2052|consen  290 YHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHD  367 (513)
T ss_pred             cccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccC-CcEEEeeceeeEEec
Confidence            5678999999988 669999999999999999999993      35679999999999999988 899999999997665


Q ss_pred             CCC-----CcccccCCCcccCccccccCCC-------CcccchhHHHHHHHHhhc----------cCCCCCC----CChH
Q 010730           75 GSQ-----QAHSVIGTPEFMAPELYEEDYN-------ELVDIYSFGMCVLEMLTS----------EYPYSEC----SNPA  128 (502)
Q Consensus        75 ~~~-----~~~s~vGTp~Y~APEvl~~~ys-------~~~DIWSLGviLyeLLTG----------~~Pf~~~----~~~~  128 (502)
                      ...     .....+||-.|||||++....+       ..+||||||.++||++..          ++||.+.    ...+
T Consensus       368 ~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~e  447 (513)
T KOG2052|consen  368 SDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFE  447 (513)
T ss_pred             ccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHH
Confidence            432     2355799999999999975422       358999999999998752          4788663    3345


Q ss_pred             HHHHHhhcCCCCCccc--ccccHH---HHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          129 QIYKKVTSGKLPGAFH--RIQDAE---ARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       129 ql~~kI~~g~~p~~~~--~~~s~~---l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      ++.+.+.-.++.+.++  ...++.   +..+++-||. +|.-|.||--+-+
T Consensus       448 eMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK  498 (513)
T KOG2052|consen  448 EMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKK  498 (513)
T ss_pred             HHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence            5555444333322211  112333   4567888998 9999999755543


No 401
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.80  E-value=4.9e-20  Score=201.47  Aligned_cols=168  Identities=26%  Similarity=0.491  Sum_probs=141.3

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC-C
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-Q   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~-~   78 (502)
                      ||.+|+|..|++++ +.|..-++..+++-|+.|++||-.++  .|||||-..|||++.+. ..|+.|||+++.+.... .
T Consensus       711 yMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~--YVHRDLAARNILVNsnL-vCKVsDFGLSRvledd~~~  787 (996)
T KOG0196|consen  711 YMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMN--YVHRDLAARNILVNSNL-VCKVSDFGLSRVLEDDPEA  787 (996)
T ss_pred             hhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcC--chhhhhhhhheeeccce-EEEeccccceeecccCCCc
Confidence            79999999999864 66999999999999999999999999  99999999999999984 88999999999886544 2


Q ss_pred             cccccC---CCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcC-CCCCcccccccHHHH
Q 010730           79 AHSVIG---TPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSG-KLPGAFHRIQDAEAR  152 (502)
Q Consensus        79 ~~s~vG---Tp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g-~~p~~~~~~~s~~l~  152 (502)
                      ..+..|   ...|.|||.+. ++++.++||||+|++|||.++ |+.||.+++|.+-| +.|..| .+|+  +..++..+.
T Consensus       788 ~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVI-kaIe~gyRLPp--PmDCP~aL~  864 (996)
T KOG0196|consen  788 AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEQGYRLPP--PMDCPAALY  864 (996)
T ss_pred             cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHH-HHHHhccCCCC--CCCCcHHHH
Confidence            233332   36799999775 789999999999999999777 99999998886654 455444 4543  345678999


Q ss_pred             HHHHHhhh-CcCCCCCHHHHhcC
Q 010730          153 RFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       153 ~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      +|+..||+ |...||.+.||+..
T Consensus       865 qLMldCWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  865 QLMLDCWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             HHHHHHHHHHhhcCCCHHHHHHH
Confidence            99999999 99999999999864


No 402
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.79  E-value=1.1e-18  Score=164.21  Aligned_cols=137  Identities=31%  Similarity=0.522  Sum_probs=117.6

Q ss_pred             CCCCCcHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC--
Q 010730            1 MFTSGTLREYRKKYTR-VDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ--   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~-L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~--   77 (502)
                      |+.+++|.+++..... +++..+..++.|++.+|.|||.++  ++|+||+|.||+++.+ +.++|+|||++.......  
T Consensus        78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~di~~~ni~v~~~-~~~~l~d~g~~~~~~~~~~~  154 (225)
T smart00221       78 YCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG--IVHRDLKPENILLGMD-GLVKLADFGLARFIHRDLAA  154 (225)
T ss_pred             ccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCC-CCEEEeeCceeeEecCcccc
Confidence            4567899999988777 899999999999999999999998  9999999999999987 799999999998765432  


Q ss_pred             CcccccCCCcccCcccc-c-cCCCCcccchhHHHHHHHHhhccCCCCC-CCChHHHHHHhhcCCCC
Q 010730           78 QAHSVIGTPEFMAPELY-E-EDYNELVDIYSFGMCVLEMLTSEYPYSE-CSNPAQIYKKVTSGKLP  140 (502)
Q Consensus        78 ~~~s~vGTp~Y~APEvl-~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~-~~~~~ql~~kI~~g~~p  140 (502)
                      ......++..|++||++ . ..++.++|+|+||+++++|++|+.||.. ..+..++++.+..+..+
T Consensus       155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  220 (225)
T smart00221      155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGVPL  220 (225)
T ss_pred             cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCCcc
Confidence            33456788999999987 3 3467799999999999999999999977 56667888888887643


No 403
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.78  E-value=3.3e-19  Score=190.15  Aligned_cols=170  Identities=22%  Similarity=0.342  Sum_probs=134.1

Q ss_pred             CCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC
Q 010730            1 MFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~   78 (502)
                      ||..|+|.+|+.++  +.++.+....++.||++|++||.+.+  +|||||.+.|+|++++ .++||+|||+++-+..+..
T Consensus       616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n--fVHrd~a~rNcLv~~e-~~iKiadfgmsR~lysg~y  692 (807)
T KOG1094|consen  616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN--FVHRDLATRNCLVDGE-FTIKIADFGMSRNLYSGDY  692 (807)
T ss_pred             HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc--hhhccccccceeecCc-ccEEecCcccccccccCCc
Confidence            67889999999987  33456667779999999999999999  9999999999999998 6999999999986543221


Q ss_pred             ---cccccCCCcccCcc-ccccCCCCcccchhHHHHHHHHh--hccCCCCCCCChHHHHHHhhc---CCCC---Cccccc
Q 010730           79 ---AHSVIGTPEFMAPE-LYEEDYNELVDIYSFGMCVLEML--TSEYPYSECSNPAQIYKKVTS---GKLP---GAFHRI  146 (502)
Q Consensus        79 ---~~s~vGTp~Y~APE-vl~~~ys~~~DIWSLGviLyeLL--TG~~Pf~~~~~~~ql~~kI~~---g~~p---~~~~~~  146 (502)
                         ....+-...|||+| ++.+++++++|+|+||+++||++  |.+-||....+ +++.+....   ..-+   ...+..
T Consensus       693 y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~-e~vven~~~~~~~~~~~~~l~~P~~  771 (807)
T KOG1094|consen  693 YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD-EQVVENAGEFFRDQGRQVVLSRPPA  771 (807)
T ss_pred             eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH-HHHHHhhhhhcCCCCcceeccCCCc
Confidence               12334567899999 66799999999999999999975  58899987443 444433221   1111   234556


Q ss_pred             ccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          147 QDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       147 ~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      ++..+.+++.+||. +-.+||++++|..+
T Consensus       772 cp~~lyelml~Cw~~es~~RPsFe~lh~~  800 (807)
T KOG1094|consen  772 CPQGLYELMLRCWRRESEQRPSFEQLHLF  800 (807)
T ss_pred             CcHHHHHHHHHHhchhhhcCCCHHHHHHH
Confidence            67889999999998 99999999998764


No 404
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.77  E-value=7.3e-18  Score=160.88  Aligned_cols=176  Identities=29%  Similarity=0.399  Sum_probs=141.9

Q ss_pred             CCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC
Q 010730            1 MFTSGTLREYRKKYT---RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~---~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~   77 (502)
                      ++.+++|.+++....   .+....+..++.||+.+|.|+|..+  ++||||||+||+++.....++++|||++.......
T Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~--~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~  156 (384)
T COG0515          79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG--IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG  156 (384)
T ss_pred             cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence            467899998887765   7999999999999999999999999  99999999999999873379999999998654332


Q ss_pred             -------CcccccCCCcccCcccccc----CCCCcccchhHHHHHHHHhhccCCCCCCCC---hHHHHHHhhcCCCC-Cc
Q 010730           78 -------QAHSVIGTPEFMAPELYEE----DYNELVDIYSFGMCVLEMLTSEYPYSECSN---PAQIYKKVTSGKLP-GA  142 (502)
Q Consensus        78 -------~~~s~vGTp~Y~APEvl~~----~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~---~~ql~~kI~~g~~p-~~  142 (502)
                             .....+||+.|+|||++.+    .+....|+||+|++++++++|..||.....   ..+....+.....+ ..
T Consensus       157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (384)
T COG0515         157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA  236 (384)
T ss_pred             ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccc
Confidence                   2466789999999998864    588899999999999999999999876543   45666666555433 11


Q ss_pred             ccccc------cHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCc
Q 010730          143 FHRIQ------DAEARRFVGKCLE-NVSKRLPAKELLLDPFLA  178 (502)
Q Consensus       143 ~~~~~------s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~  178 (502)
                      .....      ...+.+++.+++. +|..|.+..+...++|..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~  279 (384)
T COG0515         237 SPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA  279 (384)
T ss_pred             cccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhh
Confidence            11111      2578999999998 999999999988886654


No 405
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.76  E-value=3.1e-19  Score=190.23  Aligned_cols=117  Identities=27%  Similarity=0.487  Sum_probs=106.9

Q ss_pred             CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccc
Q 010730            3 TSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSV   82 (502)
Q Consensus         3 tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~   82 (502)
                      .|-+|++||..+++++|.+++.+++||+.|+++||++|  |||||||-+|++++++ |.+||+|||.+..... .....+
T Consensus       653 ~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~--ivhrdikdenvivd~~-g~~klidfgsaa~~ks-gpfd~f  728 (772)
T KOG1152|consen  653 EGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQG--IVHRDIKDENVIVDSN-GFVKLIDFGSAAYTKS-GPFDVF  728 (772)
T ss_pred             CCcchhhhhhccCccchHHHHHHHHHHHhccccccccC--ceecccccccEEEecC-CeEEEeeccchhhhcC-CCccee
Confidence            36799999999999999999999999999999999999  9999999999999998 8999999999987654 455778


Q ss_pred             cCCCcccCccccccC--CCCcccchhHHHHHHHHhhccCCCCC
Q 010730           83 IGTPEFMAPELYEED--YNELVDIYSFGMCVLEMLTSEYPYSE  123 (502)
Q Consensus        83 vGTp~Y~APEvl~~~--ys~~~DIWSLGviLyeLLTG~~Pf~~  123 (502)
                      +||..|.|||++.+.  -+..-|||++|++||.++..+.||++
T Consensus       729 ~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  729 VGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             eeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            999999999999865  46788999999999999999999964


No 406
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.73  E-value=4e-18  Score=191.82  Aligned_cols=152  Identities=32%  Similarity=0.517  Sum_probs=125.3

Q ss_pred             HHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC----------------CCcccccCCCcccCccc
Q 010730           30 LRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS----------------QQAHSVIGTPEFMAPEL   93 (502)
Q Consensus        30 L~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~----------------~~~~s~vGTp~Y~APEv   93 (502)
                      +.+++|||+.+  |+|||+||+|++|+.- |++|++|||+.+..-..                ..-+.++|||.|+|||+
T Consensus       153 vla~Eylh~yg--ivhrdlkpdnllIT~m-GhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeV  229 (1205)
T KOG0606|consen  153 VLAVEYLHSYG--IVHRDLKPDNLLITSM-GHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEV  229 (1205)
T ss_pred             hHHhHhhccCC--eecCCCCCCcceeeec-ccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhh
Confidence            67899999988  9999999999999875 89999999998753211                01134789999999997


Q ss_pred             cc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC--CCcccccccHHHHHHHHHhhh-CcCCCC---
Q 010730           94 YE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL--PGAFHRIQDAEARRFVGKCLE-NVSKRL---  166 (502)
Q Consensus        94 l~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~--p~~~~~~~s~~l~~LI~kcL~-dP~kRp---  166 (502)
                      +. ..|+..+|+|++|+|+|+.+.|..||.+ +.+++++..+.....  |.. .....++++++|.++|. +|..|.   
T Consensus       230 ilrqgygkpvdwwamGiIlyeFLVgcvpffG-dtpeelfg~visd~i~wpE~-dea~p~Ea~dli~~LL~qnp~~Rlgt~  307 (1205)
T KOG0606|consen  230 ILRQGYGKPVDWWAMGIILYEFLVGCVPFFG-DTPEELFGQVISDDIEWPEE-DEALPPEAQDLIEQLLRQNPLCRLGTG  307 (1205)
T ss_pred             hhhhccCCCccHHHHHHHHHHHheeeeeccC-CCHHHHHhhhhhhhcccccc-CcCCCHHHHHHHHHHHHhChHhhcccc
Confidence            65 5699999999999999999999999987 788999988876433  333 33346899999999998 998886   


Q ss_pred             CHHHHhcCCCCcCCCCCCCC
Q 010730          167 PAKELLLDPFLASDAGEPLL  186 (502)
Q Consensus       167 Sa~ELL~hPff~~~~~~~l~  186 (502)
                      .+-++.+|+||+...+..+.
T Consensus       308 ga~evk~h~ff~~LDw~~ll  327 (1205)
T KOG0606|consen  308 GALEVKQHGFFQLLDWKSLL  327 (1205)
T ss_pred             hhhhhhhccceeecccchhh
Confidence            47889999999988887443


No 407
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.73  E-value=2.1e-17  Score=170.05  Aligned_cols=165  Identities=22%  Similarity=0.326  Sum_probs=136.0

Q ss_pred             CCcHHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccC
Q 010730            4 SGTLREYRKKY--------TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG   75 (502)
Q Consensus         4 gGsL~~yi~k~--------~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~   75 (502)
                      =|+|+.|+...        +.+.-.++..++.||..|++|||.++  |||.||...|.++++. -+|||+|=.+++-+-+
T Consensus       372 ~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~--ViHkDiAaRNCvIdd~-LqVkltDsaLSRDLFP  448 (563)
T KOG1024|consen  372 VGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG--VIHKDIAARNCVIDDQ-LQVKLTDSALSRDLFP  448 (563)
T ss_pred             cchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC--cccchhhhhcceehhh-eeEEeccchhccccCc
Confidence            48999999832        23666788889999999999999999  9999999999999987 4899999999876532


Q ss_pred             CC--Ccc-cccCCCcccCccccc-cCCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCcccccccHH
Q 010730           76 SQ--QAH-SVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAE  150 (502)
Q Consensus        76 ~~--~~~-s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~  150 (502)
                      ..  .+. ..--...||+||.+. ..|+.++|+|||||+||||+| |+.||.+ .++.+++..+..|..- ..+-.++.+
T Consensus       449 ~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pyae-IDPfEm~~ylkdGyRl-aQP~NCPDe  526 (563)
T KOG1024|consen  449 GDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAE-IDPFEMEHYLKDGYRL-AQPFNCPDE  526 (563)
T ss_pred             ccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccc-cCHHHHHHHHhcccee-cCCCCCcHH
Confidence            11  111 112245799999764 669999999999999999999 9999987 7889999888888653 455667889


Q ss_pred             HHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          151 ARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       151 l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      +..++.-||. .|.+||+.+|+..
T Consensus       527 Lf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  527 LFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             HHHHHHHHHhcCcccCCCHHHHHH
Confidence            9999999999 9999999999864


No 408
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.73  E-value=2.1e-18  Score=186.19  Aligned_cols=169  Identities=27%  Similarity=0.369  Sum_probs=145.2

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |..||.|...+.+...+++..++.+...++.+++.+|..+  |+|||+|++||+++.+ |++|+.|||+++..-..+.. 
T Consensus        78 ~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~--iiyrd~k~enilld~~-Ghi~~tdfglske~v~~~~~-  153 (612)
T KOG0603|consen   78 FLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLG--IAYRDYKLENVLLLLE-GHIKLTDFGLSKEAVKEKIA-  153 (612)
T ss_pred             hcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhH--HHHhcccccceeeccc-CccccCCchhhhHhHhhhhc-
Confidence            4578899998888889999999999999999999999998  9999999999999988 89999999999876443322 


Q ss_pred             cccCCCcccCccccccCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhhh
Q 010730           81 SVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE  160 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~  160 (502)
                        +||..|||||++. ....++|.||||+++++|+||..||..     ++.+.|...++  ..+...+..+++++..++.
T Consensus       154 --cgt~eymApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~-----~~~~~Il~~~~--~~p~~l~~~a~~~~~~l~~  223 (612)
T KOG0603|consen  154 --CGTYEYRAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG-----DTMKRILKAEL--EMPRELSAEARSLFRQLFK  223 (612)
T ss_pred             --ccchhhhhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch-----HHHHHHhhhcc--CCchhhhHHHHHHHHHHHh
Confidence              9999999999998 667889999999999999999999976     55666665554  3455567899999999998


Q ss_pred             -CcCCCCC-----HHHHhcCCCCcCCCCC
Q 010730          161 -NVSKRLP-----AKELLLDPFLASDAGE  183 (502)
Q Consensus       161 -dP~kRpS-----a~ELL~hPff~~~~~~  183 (502)
                       +|..|..     +.|+++|+||+...+.
T Consensus       224 r~p~nrLg~~~~~~~eik~h~f~~~i~~~  252 (612)
T KOG0603|consen  224 RNPENRLGAGPDGVDEIKQHEFFQSIDWN  252 (612)
T ss_pred             hCHHHHhccCcchhHHHhccchheeeeHh
Confidence             9999976     6899999999876654


No 409
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.71  E-value=1e-17  Score=165.94  Aligned_cols=171  Identities=26%  Similarity=0.430  Sum_probs=124.7

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEE-eCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFV-NGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl-~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.-|+|..-+.. ..+.|...+.++.|+++||.|+|+.+  +||||||.+|||+ +.+..+|||||||+......  ..
T Consensus       103 ~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHskn--lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~--tV  177 (378)
T KOG1345|consen  103 FAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKN--LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT--TV  177 (378)
T ss_pred             cCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccc--hhhcccccceEEEecCCccEEEeeecccccccCc--ee
Confidence            4566888887755 45889999999999999999999999  9999999999997 45567899999999865432  22


Q ss_pred             ccccCCCcccCccccc----cC--CCCcccchhHHHHHHHHhhccCCCCCCCChH---HHHHHhhcCC---CCCcccccc
Q 010730           80 HSVIGTPEFMAPELYE----ED--YNELVDIYSFGMCVLEMLTSEYPYSECSNPA---QIYKKVTSGK---LPGAFHRIQ  147 (502)
Q Consensus        80 ~s~vGTp~Y~APEvl~----~~--ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~---ql~~kI~~g~---~p~~~~~~~  147 (502)
                      ...-.+..|.+||++.    +.  .++..|||.||+++|..+||.+||.......   --|.+...++   .|..|... 
T Consensus       178 ~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~f-  256 (378)
T KOG1345|consen  178 KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPF-  256 (378)
T ss_pred             hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhccc-
Confidence            3334567799999764    22  5788999999999999999999997532222   2233333333   33334433 


Q ss_pred             cHHHHHHHHHhhh-CcCCC---CCHHHHhcCCCC
Q 010730          148 DAEARRFVGKCLE-NVSKR---LPAKELLLDPFL  177 (502)
Q Consensus       148 s~~l~~LI~kcL~-dP~kR---pSa~ELL~hPff  177 (502)
                      ++.+..+.++-|. ++.+|   -+++.....-|.
T Consensus       257 s~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~  290 (378)
T KOG1345|consen  257 SEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK  290 (378)
T ss_pred             CHHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence            5667777788887 77777   456666666665


No 410
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.70  E-value=6.5e-18  Score=179.40  Aligned_cols=166  Identities=28%  Similarity=0.471  Sum_probs=132.4

Q ss_pred             CCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCC
Q 010730            1 MFTSGTLREYRKKYT---RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~---~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~   77 (502)
                      +++.++|.+|+.+..   ..+...++.|+.||..|++|   ++  .+|||+||.||++..+ ..+||+|||+........
T Consensus       337 ~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~--~ihrdlkp~nif~~~d-~q~kIgDFgl~ts~~~~~  410 (516)
T KOG1033|consen  337 LCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG--LIHRDLKPSNIFFSDD-DQLKIGDFGLVTSQDKDE  410 (516)
T ss_pred             hhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc--chhhhccccccccccc-hhhhhhhhhheeecccCC
Confidence            356789999997543   36677889999999999999   66  9999999999999876 589999999987765443


Q ss_pred             -------CcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCCCCccccccc
Q 010730           78 -------QAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKLPGAFHRIQD  148 (502)
Q Consensus        78 -------~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s  148 (502)
                             .....+||..||+||.+.+ .|+.++||||||+||+||+. -..++.    ....+..+..|.+|+.+... .
T Consensus       411 ~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e----r~~t~~d~r~g~ip~~~~~d-~  485 (516)
T KOG1033|consen  411 TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE----RIATLTDIRDGIIPPEFLQD-Y  485 (516)
T ss_pred             cccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH----HHHhhhhhhcCCCChHHhhc-C
Confidence                   3455789999999998875 59999999999999999988 333432    23345667788887554433 3


Q ss_pred             HHHHHHHHHhhh-CcCCCCCHHHHhcCCCC
Q 010730          149 AEARRFVGKCLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       149 ~~l~~LI~kcL~-dP~kRpSa~ELL~hPff  177 (502)
                      +.-..|+..+|. .|.+||++.+.-.|+|+
T Consensus       486 p~e~~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  486 PEEYTLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             cHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence            566789999998 99999988888888775


No 411
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.57  E-value=1.2e-14  Score=150.23  Aligned_cols=165  Identities=27%  Similarity=0.357  Sum_probs=119.4

Q ss_pred             CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCC---CCcEEEEecCCceeccCC-----
Q 010730            5 GTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGH---LGQIKIGDLGLAAILRGS-----   76 (502)
Q Consensus         5 GsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~---~g~vKL~DFGlA~~~~~~-----   76 (502)
                      .||++|+-. ...+....+-++.|+|+|+.|||.||  |.|||||.+|||+.-+   ...+.++|||-+---...     
T Consensus       327 ~tLr~yl~~-~~~s~r~~~~~laQlLEav~hL~~hg--vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlp  403 (598)
T KOG4158|consen  327 QTLREYLWT-RHRSYRTGRVILAQLLEAVTHLHKHG--VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLP  403 (598)
T ss_pred             hhHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHcc--chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccc
Confidence            478888855 34677788889999999999999999  9999999999998532   246899999976321110     


Q ss_pred             --CCcccccCCCcccCccccccC-------CCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccc
Q 010730           77 --QQAHSVIGTPEFMAPELYEED-------YNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQ  147 (502)
Q Consensus        77 --~~~~s~vGTp~Y~APEvl~~~-------ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~  147 (502)
                        ...-..-|.-.-||||+....       ...++|.|+.|.+.||+++...||+......--.+...+.++| .++...
T Consensus       404 y~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLP-alp~~v  482 (598)
T KOG4158|consen  404 YESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLP-ALPSRV  482 (598)
T ss_pred             cccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCC-CCcccC
Confidence              111123467788999988532       2358999999999999999999998722211112223334454 445556


Q ss_pred             cHHHHHHHHHhhh-CcCCCCC---HHHHhc
Q 010730          148 DAEARRFVGKCLE-NVSKRLP---AKELLL  173 (502)
Q Consensus       148 s~~l~~LI~kcL~-dP~kRpS---a~ELL~  173 (502)
                      ++.+++++..+|+ ||+||++   |+.+|+
T Consensus       483 pp~~rqlV~~lL~r~pskRvsp~iAANvl~  512 (598)
T KOG4158|consen  483 PPVARQLVFDLLKRDPSKRVSPNIAANVLN  512 (598)
T ss_pred             ChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence            7899999999999 9999998   445554


No 412
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.57  E-value=2.7e-15  Score=169.58  Aligned_cols=162  Identities=19%  Similarity=0.256  Sum_probs=118.1

Q ss_pred             cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceec--cCCCC--ccc
Q 010730            6 TLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAIL--RGSQQ--AHS   81 (502)
Q Consensus         6 sL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~--~~~~~--~~s   81 (502)
                      +|.+.+.-.+-+..-+.+.++.|||.||..||..|  |+|+|||.||||++.= +.+.|+||.--|..  .....  ..-
T Consensus       106 nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~g--VcHGDIKsENILiTSW-NW~~LtDFAsFKPtYLPeDNPadf~f  182 (1431)
T KOG1240|consen  106 NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLG--VCHGDIKSENILITSW-NWLYLTDFASFKPTYLPEDNPADFTF  182 (1431)
T ss_pred             hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcC--ccccccccceEEEeee-chhhhhcccccCCccCCCCCcccceE
Confidence            55565655566888889999999999999999998  9999999999999875 57999999876542  22111  111


Q ss_pred             cc----CCCcccCcccccc------------CCCCcccchhHHHHHHHHhh-ccCCCCCCCChHHHHHHhhcCCC--CCc
Q 010730           82 VI----GTPEFMAPELYEE------------DYNELVDIYSFGMCVLEMLT-SEYPYSECSNPAQIYKKVTSGKL--PGA  142 (502)
Q Consensus        82 ~v----GTp~Y~APEvl~~------------~ys~~~DIWSLGviLyeLLT-G~~Pf~~~~~~~ql~~kI~~g~~--p~~  142 (502)
                      +.    --.+|+|||-+-.            ...++-||||+||+++||++ |++||.    ..|++.--..+..  ..-
T Consensus       183 FFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~----LSQL~aYr~~~~~~~e~~  258 (1431)
T KOG1240|consen  183 FFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT----LSQLLAYRSGNADDPEQL  258 (1431)
T ss_pred             EEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc----HHHHHhHhccCccCHHHH
Confidence            22    2347999996521            13567899999999999998 888883    2344322111111  112


Q ss_pred             ccccccHHHHHHHHHhhh-CcCCCCCHHHHhcC
Q 010730          143 FHRIQDAEARRFVGKCLE-NVSKRLPAKELLLD  174 (502)
Q Consensus       143 ~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~h  174 (502)
                      +..+.+..++++|..|++ ||.+|++|++.|+-
T Consensus       259 Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  259 LEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            344556789999999999 99999999999975


No 413
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.52  E-value=1.8e-13  Score=140.31  Aligned_cols=170  Identities=21%  Similarity=0.250  Sum_probs=120.7

Q ss_pred             CCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCC----CcEEEEecCCceecc-
Q 010730            2 FTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHL----GQIKIGDLGLAAILR-   74 (502)
Q Consensus         2 ~tgGsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~----g~vKL~DFGlA~~~~-   74 (502)
                      +.|-+|.++++..  +.++...+..++.|++.+|++||+.|  +|||||||+|+++....    ..+.|+|||+++... 
T Consensus       102 l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G--~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~  179 (322)
T KOG1164|consen  102 LLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG--FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKY  179 (322)
T ss_pred             ccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC--cccCCcCHHHeeecCCCCcccceEEEEecCCCccccc
Confidence            3578999998665  57999999999999999999999999  99999999999997542    369999999998321 


Q ss_pred             --CCC----C----cccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHH--HHHHhhcCCCCC
Q 010730           75 --GSQ----Q----AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQ--IYKKVTSGKLPG  141 (502)
Q Consensus        75 --~~~----~----~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~q--l~~kI~~g~~p~  141 (502)
                        ...    .    .....||..|+++.+..+ ..+...|+||++.++.+|+.|..||........  -+.+........
T Consensus       180 ~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~  259 (322)
T KOG1164|consen  180 VGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTD  259 (322)
T ss_pred             cCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccc
Confidence              111    0    123559999999997765 488999999999999999999999976443222  222222221111


Q ss_pred             cccccccHHHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          142 AFHRIQDAEARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       142 ~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                      ........++..+...+-. +...+|....+..
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~  292 (322)
T KOG1164|consen  260 RFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE  292 (322)
T ss_pred             cccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence            1222233455555544444 6677777655544


No 414
>PF14531 Kinase-like:  Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.51  E-value=1.2e-14  Score=147.56  Aligned_cols=131  Identities=19%  Similarity=0.267  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccccCCCcccCcccccc------
Q 010730           23 KNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEE------   96 (502)
Q Consensus        23 ~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~vGTp~Y~APEvl~~------   96 (502)
                      ..+..|++..+++||.+|  |+|+||||+|+|++.+ |.++|+||+.......  .......+..|.+||+...      
T Consensus       148 l~lT~Q~I~lvA~Lh~~G--lVHgdi~~~nfll~~~-G~v~Lg~F~~~~r~g~--~~~~~~~~~~~~PPe~~~~~~~~~~  222 (288)
T PF14531_consen  148 LSLTVQMIRLVANLHSYG--LVHGDIKPENFLLDQD-GGVFLGDFSSLVRAGT--RYRCSEFPVAFTPPELESCAGQFGQ  222 (288)
T ss_dssp             HHHHHHHHHHHHHHHHTT--EEEST-SGGGEEE-TT-S-EEE--GGGEEETTE--EEEGGGS-TTTS-HHHHHHHTSCHH
T ss_pred             HHHHHHHHHHHHHHhhcc--eEecccceeeEEEcCC-CCEEEcChHHHeecCc--eeeccCCCcccCChhhhhhhcccCc
Confidence            455599999999999999  9999999999999987 8999999988755432  2222345688999997632      


Q ss_pred             ---CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHHhhh-CcCCC
Q 010730           97 ---DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKR  165 (502)
Q Consensus        97 ---~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kR  165 (502)
                         .++.+.|.|+||+++|.|+||..||............+..     ..  ..+..++.||..+|+ +|.+|
T Consensus       223 ~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~~f~~-----C~--~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  223 NNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEWDFSR-----CR--DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             SEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGGGGTT-----SS-----HHHHHHHHHHT-SSGGGS
T ss_pred             ccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccccchh-----cC--CcCHHHHHHHHHHccCCcccC
Confidence               3788999999999999999999999652111100001111     11  346789999999998 99877


No 415
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.43  E-value=5.1e-13  Score=143.75  Aligned_cols=171  Identities=26%  Similarity=0.387  Sum_probs=128.3

Q ss_pred             CCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC---
Q 010730            1 MFTSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS---   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~---   76 (502)
                      |+.-|+|.+.+.+ .-.++..-...++++|+.||.|||..-. ..|+.|+..|.+++.. ..+||.|||+.......   
T Consensus        28 ~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i-~~hg~l~s~nClvd~~-w~lklt~~Gl~~~~~~~~~~  105 (484)
T KOG1023|consen   28 YCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPI-GYHGALKSSNCLVDSR-WVLKLTDFGLNSLLEETAEP  105 (484)
T ss_pred             eecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcc-eeeeeeccccceeeee-EEEEechhhhcccccccccc
Confidence            5678999999987 4568888899999999999999997642 3999999999999988 69999999998765321   


Q ss_pred             CCcccccCCCcccCccccccC--------CCCcccchhHHHHHHHHhhccCCCCCC---CChHHHHHHhhcCCCCCcccc
Q 010730           77 QQAHSVIGTPEFMAPELYEED--------YNELVDIYSFGMCVLEMLTSEYPYSEC---SNPAQIYKKVTSGKLPGAFHR  145 (502)
Q Consensus        77 ~~~~s~vGTp~Y~APEvl~~~--------ys~~~DIWSLGviLyeLLTG~~Pf~~~---~~~~ql~~kI~~g~~p~~~~~  145 (502)
                      .......-...|.|||++...        ...+.||||||++++|+++...||...   ..+.++..++..+..+...+.
T Consensus       106 ~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~  185 (484)
T KOG1023|consen  106 EAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPS  185 (484)
T ss_pred             cccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcc
Confidence            111111223568999988643        456799999999999999999999763   233456666666222211111


Q ss_pred             -----cccHHHHHHHHHhhh-CcCCCCCHHHHhc
Q 010730          146 -----IQDAEARRFVGKCLE-NVSKRLPAKELLL  173 (502)
Q Consensus       146 -----~~s~~l~~LI~kcL~-dP~kRpSa~ELL~  173 (502)
                           ...+++..++..||. +|.+||+++++-.
T Consensus       186 i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  186 IELLNELPPELLLLVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             hhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence                 223468899999998 9999999888654


No 416
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.42  E-value=9.8e-14  Score=153.98  Aligned_cols=176  Identities=30%  Similarity=0.425  Sum_probs=139.2

Q ss_pred             CCCCCcHHHHH-HhCC-CCCHHHHHHHHHHHHHHHHHHH-hCCCCeEecCCCCCcEEEeCCCC-cEEEEecCCceeccC-
Q 010730            1 MFTSGTLREYR-KKYT-RVDIRAVKNWARQILRGIAYLH-GHDPPVIHRDLKCDNIFVNGHLG-QIKIGDLGLAAILRG-   75 (502)
Q Consensus         1 ~~tgGsL~~yi-~k~~-~L~e~~i~~i~~QIL~gL~YLH-s~g~~IIHRDLKPeNILl~~~~g-~vKL~DFGlA~~~~~-   75 (502)
                      |..||++++.+ .... ..+...+..++.|+..+|.|+| ..+  +.||||||+|.+++.+ + .+|+.|||+|..+.. 
T Consensus       102 ~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~--~~h~~ikP~n~~l~~s-~~~l~~~df~~At~~~~~  178 (601)
T KOG0590|consen  102 YSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG--VTHRDIKPSNSLLDES-GSALKIADFGLATAYRNK  178 (601)
T ss_pred             cccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc--cccCCCCCccchhccC-CCcccCCCchhhcccccc
Confidence            35678888888 5544 6777888999999999999999 777  9999999999999987 5 899999999987654 


Q ss_pred             CC---CcccccC-CCcccCcccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCC--CCCcccccc
Q 010730           76 SQ---QAHSVIG-TPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGK--LPGAFHRIQ  147 (502)
Q Consensus        76 ~~---~~~s~vG-Tp~Y~APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~--~p~~~~~~~  147 (502)
                      ..   .....+| ++.|+|||.+.+  ...+..|+||+|+++..|++|..|+.......+-|.......  .....+...
T Consensus       179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (601)
T KOG0590|consen  179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSI  258 (601)
T ss_pred             CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccC
Confidence            22   2344678 999999998876  467889999999999999999999865433333333333222  112334455


Q ss_pred             cHHHHHHHHHhhh-CcCCCCCHHHHhcCCCCcC
Q 010730          148 DAEARRFVGKCLE-NVSKRLPAKELLLDPFLAS  179 (502)
Q Consensus       148 s~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~~  179 (502)
                      +..+.+++.++|. +|..|.+.+++-.+||+..
T Consensus       259 ~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  259 SDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             ChhhhhcccccccCCchhccccccccccccccc
Confidence            7788999999996 9999999999999999976


No 417
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.40  E-value=2.8e-13  Score=137.67  Aligned_cols=171  Identities=33%  Similarity=0.585  Sum_probs=121.4

Q ss_pred             CCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC
Q 010730            1 MFTSGTLREYRKKY----TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         1 ~~tgGsL~~yi~k~----~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~   76 (502)
                      ||.+|+|.+|+++-    +.+..+..++|+.||+.||.|||+..|+|+|+++.++.|++..+ |-||++--.... +...
T Consensus       153 ymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~n-gLIkig~~ap~s-~h~s  230 (458)
T KOG1266|consen  153 YMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHN-GLIKIGSVAPDS-THPS  230 (458)
T ss_pred             cccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCC-ceEEecccCccc-cchh
Confidence            78999999999753    46899999999999999999999999999999999999999865 677765322111 1110


Q ss_pred             CC------cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccH
Q 010730           77 QQ------AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDA  149 (502)
Q Consensus        77 ~~------~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~  149 (502)
                      ..      .....+-++|.+||.=. .+...++|||+||++.++|..+..--.+.......-..+..     ..-.....
T Consensus       231 ~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~-----~i~~len~  305 (458)
T KOG1266|consen  231 VNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIAN-----VIIGLENG  305 (458)
T ss_pred             hhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhh-----heeeccCc
Confidence            00      11123678999998543 45677899999999999999887653332111111111111     11112233


Q ss_pred             HHHHHHHHhhh-CcCCCCCHHHHhcCCCCc
Q 010730          150 EARRFVGKCLE-NVSKRLPAKELLLDPFLA  178 (502)
Q Consensus       150 ~l~~LI~kcL~-dP~kRpSa~ELL~hPff~  178 (502)
                      .-+.+|.+||+ .|..||+|.++|.||.+-
T Consensus       306 lqr~~i~kcl~~eP~~rp~ar~llfHpllf  335 (458)
T KOG1266|consen  306 LQRGSITKCLEGEPNGRPDARLLLFHPLLF  335 (458)
T ss_pred             cccCcCcccccCCCCCCcchhhhhcCceee
Confidence            45788999999 999999999999998763


No 418
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.39  E-value=1.4e-12  Score=132.72  Aligned_cols=135  Identities=24%  Similarity=0.393  Sum_probs=110.4

Q ss_pred             CCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCC----CCcEEEEecCCceeccCCC
Q 010730            3 TSGTLREYRKKY-TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGH----LGQIKIGDLGLAAILRGSQ   77 (502)
Q Consensus         3 tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~----~g~vKL~DFGlA~~~~~~~   77 (502)
                      .|-+|.++..-. .+|+.+.+.-++.|++.-++|+|++.  +|.|||||+|+||...    ...|.|+|||+|+......
T Consensus       106 LGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~--LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~  183 (449)
T KOG1165|consen  106 LGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKD--LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK  183 (449)
T ss_pred             hCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcc--eeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence            466777777654 46999999999999999999999999  9999999999999532    2468999999999875432


Q ss_pred             C--------cccccCCCcccCccc-cccCCCCcccchhHHHHHHHHhhccCCCCCC--CChHHHHHHhhcCCC
Q 010730           78 Q--------AHSVIGTPEFMAPEL-YEEDYNELVDIYSFGMCVLEMLTSEYPYSEC--SNPAQIYKKVTSGKL  139 (502)
Q Consensus        78 ~--------~~s~vGTp~Y~APEv-l~~~ys~~~DIWSLGviLyeLLTG~~Pf~~~--~~~~ql~~kI~~g~~  139 (502)
                      .        .++..||..||+--- +...-+..-|+=|||-++++.|-|.+||.+.  .+..+-|++|...+.
T Consensus       184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr  256 (449)
T KOG1165|consen  184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKR  256 (449)
T ss_pred             ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccc
Confidence            2        245679999999874 4456788899999999999999999999874  556778888876554


No 419
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.35  E-value=1.5e-12  Score=127.82  Aligned_cols=155  Identities=23%  Similarity=0.352  Sum_probs=116.0

Q ss_pred             CCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEe--CCCCcEEEEecCCceeccCCCC-
Q 010730            3 TSGTLREYRKK-YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVN--GHLGQIKIGDLGLAAILRGSQQ-   78 (502)
Q Consensus         3 tgGsL~~yi~k-~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~--~~~g~vKL~DFGlA~~~~~~~~-   78 (502)
                      .|-+|.++..- .+.++.+.+.-++-|++.-++|+|.++  +|||||||+|+|..  .+..++.|+|||+|+.+..... 
T Consensus        93 LGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~--fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~  170 (341)
T KOG1163|consen   93 LGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRN--FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTR  170 (341)
T ss_pred             cCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhc--cccccCCccceeeccccccceEEEEeccchhhhcccccc
Confidence            35667776653 356999999999999999999999999  99999999999974  3445799999999987643211 


Q ss_pred             -------cccccCCCcccCccccc-cCCCCcccchhHHHHHHHHhhccCCCCCC--CChHHHHHHhhcCCCCCcccccc-
Q 010730           79 -------AHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSEYPYSEC--SNPAQIYKKVTSGKLPGAFHRIQ-  147 (502)
Q Consensus        79 -------~~s~vGTp~Y~APEvl~-~~ys~~~DIWSLGviLyeLLTG~~Pf~~~--~~~~ql~~kI~~g~~p~~~~~~~-  147 (502)
                             -....||..|.+-...- ...+..-|+-|+|.+|.++.-|..||.+.  .+..|-|.+|..-+........+ 
T Consensus       171 ~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~  250 (341)
T KOG1163|consen  171 QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCK  250 (341)
T ss_pred             ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhC
Confidence                   13457999998877543 34677889999999999999999999874  34567788887766644333322 


Q ss_pred             --cHHHHHHHHHhh
Q 010730          148 --DAEARRFVGKCL  159 (502)
Q Consensus       148 --s~~l~~LI~kcL  159 (502)
                        +.++...+.-|-
T Consensus       251 G~P~EF~myl~Y~R  264 (341)
T KOG1163|consen  251 GFPAEFAMYLNYCR  264 (341)
T ss_pred             CCcHHHHHHHHHHh
Confidence              445555555443


No 420
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.32  E-value=2e-12  Score=146.45  Aligned_cols=182  Identities=25%  Similarity=0.411  Sum_probs=150.3

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc------
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR------   74 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~------   74 (502)
                      |+.||+|...+.+-+..+++.++.++..+..+++|||+..  ++|||+||.|+++... +..++.|||......      
T Consensus       885 ~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~--r~h~~~~p~~~l~~~~-gh~~l~~~~t~~~vg~~~p~~  961 (1205)
T KOG0606|consen  885 YLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSL--RKHRDLKPDSLLIAYD-GHRPLTDFGTLSKVGLIPPTT  961 (1205)
T ss_pred             HhccCCchhhhhcCCCcccccccchhHHHHhhhhccccch--hhcccccccchhhccc-CCcccCccccccccccccCcC
Confidence            3457888888888888999999999999999999999987  8999999999999876 789999998432210      


Q ss_pred             CC--------------------------CCcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCCh
Q 010730           75 GS--------------------------QQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNP  127 (502)
Q Consensus        75 ~~--------------------------~~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~  127 (502)
                      ..                          ......+||+.|.+||.+.+ .-...+|+|++|+++++.++|.+||.. ..+
T Consensus       962 ~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na-~tp 1040 (1205)
T KOG0606|consen  962 DLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA-ETP 1040 (1205)
T ss_pred             CcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC-cch
Confidence            00                          01234679999999997754 578889999999999999999999966 788


Q ss_pred             HHHHHHhhcCCCCCcc-cccccHHHHHHHHHhhh-CcCCCCCHH---HHhcCCCCcCCCCCCCC
Q 010730          128 AQIYKKVTSGKLPGAF-HRIQDAEARRFVGKCLE-NVSKRLPAK---ELLLDPFLASDAGEPLL  186 (502)
Q Consensus       128 ~ql~~kI~~g~~p~~~-~~~~s~~l~~LI~kcL~-dP~kRpSa~---ELL~hPff~~~~~~~l~  186 (502)
                      .++++.|..+..+.+. +...+.++++++.++|. ++.+|..+.   ++-.||||+..++..+.
T Consensus      1041 q~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~l~ 1104 (1205)
T KOG0606|consen 1041 QQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWENLA 1104 (1205)
T ss_pred             hhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCccccc
Confidence            8999999888876433 33457899999999998 999999977   89999999988887654


No 421
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.30  E-value=6.9e-12  Score=124.83  Aligned_cols=165  Identities=21%  Similarity=0.318  Sum_probs=123.2

Q ss_pred             CCCCCcHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCC-CcEEEEecCCceeccCCC
Q 010730            1 MFTSGTLREYRKKYTR--VDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHL-GQIKIGDLGLAAILRGSQ   77 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~--L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~-g~vKL~DFGlA~~~~~~~   77 (502)
                      ||.-|+|+..+.....  ++..++.+++.+|+.|++|||+..+-|.---|....++++.+. .++..+|--++-+     
T Consensus       268 ~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfq-----  342 (448)
T KOG0195|consen  268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ-----  342 (448)
T ss_pred             eccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeee-----
Confidence            6788999999976543  7888999999999999999999986455556788889998763 3344455433321     


Q ss_pred             CcccccCCCcccCccccccC----CCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHH
Q 010730           78 QAHSVIGTPEFMAPELYEED----YNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARR  153 (502)
Q Consensus        78 ~~~s~vGTp~Y~APEvl~~~----ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~  153 (502)
                       .......|.||+||.+..+    .-.++|+|||++++|||.|.+.||.+.++.+--.+....|-. ..+++..+..+-.
T Consensus       343 -e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglr-v~ippgis~hm~k  420 (448)
T KOG0195|consen  343 -EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLR-VHIPPGISRHMNK  420 (448)
T ss_pred             -ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcccc-ccCCCCccHHHHH
Confidence             1223458999999988644    345799999999999999999999886665544444444433 3455566788899


Q ss_pred             HHHHhhh-CcCCCCCHHHHh
Q 010730          154 FVGKCLE-NVSKRLPAKELL  172 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL  172 (502)
                      |+.-|+. ||.+||.++.++
T Consensus       421 lm~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  421 LMNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             HHHHHhcCCCCcCCCcceeh
Confidence            9999998 999999876543


No 422
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.27  E-value=5.1e-12  Score=132.59  Aligned_cols=95  Identities=20%  Similarity=0.279  Sum_probs=71.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCC-CCCcEEEeCCCCcEEEEecCCceeccCCCC-
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDL-KCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-   78 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDL-KPeNILl~~~~g~vKL~DFGlA~~~~~~~~-   78 (502)
                      |+.|++|.. +..   ..   ...|+.||+.+|.|||++|  |+|||| ||+|||++.+ +.+||+|||+|+.+..... 
T Consensus        99 ~~~G~~L~~-~~~---~~---~~~~~~~i~~aL~~lH~~g--IiHrDL~KP~NILv~~~-~~ikLiDFGlA~~~~~~~~~  168 (365)
T PRK09188         99 WTEGVPLHL-ARP---HG---DPAWFRSAHRALRDLHRAG--ITHNDLAKPQNWLMGPD-GEAAVIDFQLASVFRRRGAL  168 (365)
T ss_pred             ccCCCCHHH-hCc---cc---hHHHHHHHHHHHHHHHHCC--CeeCCCCCcceEEEcCC-CCEEEEECccceecccCcch
Confidence            578889963 211   11   2467899999999999998  999999 9999999766 7899999999987643321 


Q ss_pred             --------cccccCCCcccCccccccC-------CCCcccch
Q 010730           79 --------AHSVIGTPEFMAPELYEED-------YNELVDIY  105 (502)
Q Consensus        79 --------~~s~vGTp~Y~APEvl~~~-------ys~~~DIW  105 (502)
                              .....+++.|+|||.+...       .+...|-|
T Consensus       169 ~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        169 YRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             hhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence                    2456789999999988532       33446666


No 423
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.26  E-value=6.8e-12  Score=122.36  Aligned_cols=113  Identities=19%  Similarity=0.158  Sum_probs=84.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCC-CCCcEEEeCCCCcEEEEecCCceeccCCCCc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDL-KCDNIFVNGHLGQIKIGDLGLAAILRGSQQA   79 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDL-KPeNILl~~~~g~vKL~DFGlA~~~~~~~~~   79 (502)
                      |+.|++|.+.+..       ....++.|++.+|.+||.+|  |+|||| ||+|||++.+ +.++|+|||++.........
T Consensus        79 yI~G~~L~~~~~~-------~~~~~~~qi~~~L~~lH~~G--IvHrDL~kp~NILv~~~-g~i~LIDFG~A~~~~~~~~~  148 (218)
T PRK12274         79 YLAGAAMYQRPPR-------GDLAYFRAARRLLQQLHRCG--VAHNDLAKEANWLVQED-GSPAVIDFQLAVRGNPRARW  148 (218)
T ss_pred             eecCccHHhhhhh-------hhHHHHHHHHHHHHHHHHCc--CccCCCCCcceEEEcCC-CCEEEEECCCceecCCcchH
Confidence            4567788654321       12357899999999999999  999999 7999999865 78999999999865543321


Q ss_pred             --------------ccccCCCcccCccccc--cCCC-CcccchhHHHHHHHHhhccCCCCC
Q 010730           80 --------------HSVIGTPEFMAPELYE--EDYN-ELVDIYSFGMCVLEMLTSEYPYSE  123 (502)
Q Consensus        80 --------------~s~vGTp~Y~APEvl~--~~ys-~~~DIWSLGviLyeLLTG~~Pf~~  123 (502)
                                    ....+++.|+.|+.-.  ...+ ...+.++.|.-+|.++|+..|+.+
T Consensus       149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~  209 (218)
T PRK12274        149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE  209 (218)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence                          1123688999998332  2233 567889999999999999988754


No 424
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.17  E-value=4.3e-11  Score=137.23  Aligned_cols=118  Identities=24%  Similarity=0.281  Sum_probs=102.2

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeC------CCCcEEEEecCCceec-
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNG------HLGQIKIGDLGLAAIL-   73 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~------~~g~vKL~DFGlA~~~-   73 (502)
                      |..-|||.+++...+.+++..+..+..|||..|+.||.++  |||+||||+|+|+..      +...++|+|||-+.-+ 
T Consensus       775 y~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~--IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~  852 (974)
T KOG1166|consen  775 YSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMG--IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK  852 (974)
T ss_pred             ccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcc--eecccCCcceeEeecccCCCCcccceEEEecccceeee
Confidence            4566999999998889999999999999999999999999  999999999999842      1235999999998543 


Q ss_pred             --cCCCCcccccCCCcccCccccccC-CCCcccchhHHHHHHHHhhccCC
Q 010730           74 --RGSQQAHSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSEYP  120 (502)
Q Consensus        74 --~~~~~~~s~vGTp~Y~APEvl~~~-ys~~~DIWSLGviLyeLLTG~~P  120 (502)
                        ........+++|-.+-.+|+..+. .+..+|.|.|+-+++.||.|++-
T Consensus       853 lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~  902 (974)
T KOG1166|consen  853 LFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM  902 (974)
T ss_pred             EcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence              444556678899999999999876 78899999999999999999853


No 425
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.15  E-value=5.2e-11  Score=113.78  Aligned_cols=69  Identities=16%  Similarity=0.194  Sum_probs=59.6

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceec
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYL-HGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAIL   73 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YL-Hs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~   73 (502)
                      |+.|++|...+.+.+.++++.+..++.||+.+|.|+ |..|  |+||||||+|||++.  +.++|+|||+|...
T Consensus        98 ~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~g--iiHrDlkP~NIli~~--~~v~LiDFG~a~~~  167 (190)
T cd05147          98 FIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCR--LVHADLSEYNLLYHD--GKLYIIDVSQSVEH  167 (190)
T ss_pred             EeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEEC--CcEEEEEccccccC
Confidence            456777776655567899999999999999999999 6888  999999999999984  58999999999754


No 426
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.11  E-value=1.6e-10  Score=109.75  Aligned_cols=71  Identities=20%  Similarity=0.188  Sum_probs=58.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccC
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHG-HDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG   75 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs-~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~   75 (502)
                      |+.|+++...+....+++...+..++.||+.+|.++|. .|  |+||||||+||+++ + +.++|+|||++..+..
T Consensus        98 ~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~g--ivHrDlkP~NIll~-~-~~~~liDFG~a~~~~~  169 (190)
T cd05145          98 FIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAG--LVHGDLSEYNILYH-D-GKPYIIDVSQAVELDH  169 (190)
T ss_pred             EecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCChhhEEEE-C-CCEEEEEcccceecCC
Confidence            45666554443344678899999999999999999999 88  99999999999998 4 7899999999976543


No 427
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.02  E-value=1.7e-10  Score=114.11  Aligned_cols=92  Identities=20%  Similarity=0.237  Sum_probs=68.0

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.|.+|.++.    .+++    ..+.+|+.+|..||..|  |+|||+||+||+++.+ | ++|+|||............
T Consensus       124 yi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~g--i~H~Dikp~Nili~~~-g-i~liDfg~~~~~~e~~a~d  191 (232)
T PRK10359        124 YIEGVELNDMP----EISE----DVKAKIKASIESLHQHG--MVSGDPHKGNFIVSKN-G-LRIIDLSGKRCTAQRKAKD  191 (232)
T ss_pred             EECCccHHHhh----hccH----HHHHHHHHHHHHHHHcC--CccCCCChHHEEEeCC-C-EEEEECCCcccccchhhHH
Confidence            45778888874    2333    24669999999999999  9999999999999876 6 9999999876543221111


Q ss_pred             cccCCCcccCccccccCCCCcccchhHHHHHHHH
Q 010730           81 SVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEM  114 (502)
Q Consensus        81 s~vGTp~Y~APEvl~~~ys~~~DIWSLGviLyeL  114 (502)
                      .          =+++..|+.++|+|+||+++..+
T Consensus       192 ~----------~vler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        192 R----------IDLERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             H----------HHHHhHhcccccccceeEeehHH
Confidence            0          12345577899999999987654


No 428
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.96  E-value=6.7e-10  Score=120.29  Aligned_cols=173  Identities=23%  Similarity=0.293  Sum_probs=136.6

Q ss_pred             CCCCcHHHHHHhCCC-CCHHHHHHHHHHHHH----HHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCC
Q 010730            2 FTSGTLREYRKKYTR-VDIRAVKNWARQILR----GIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS   76 (502)
Q Consensus         2 ~tgGsL~~yi~k~~~-L~e~~i~~i~~QIL~----gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~   76 (502)
                      ++|.+|.+|...-.. ++...++..+.+.+.    ||..+|+.+  ++|-|+||+||+...+....+++|||+...+...
T Consensus       199 ~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~--~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~  276 (524)
T KOG0601|consen  199 LCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN--IVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDG  276 (524)
T ss_pred             cccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCc--ccccccchhheecccccceeecCCcceeEEccCC
Confidence            357788888876444 889999999999999    999999998  9999999999999877457899999999887654


Q ss_pred             CCc------ccccCCCcccCccccccCCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHH
Q 010730           77 QQA------HSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAE  150 (502)
Q Consensus        77 ~~~------~s~vGTp~Y~APEvl~~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~  150 (502)
                      ...      ...-|...|++||+.++-+....|||++|.+..+..++..++....+  .-|..+..+.+|..+-...+.+
T Consensus       277 ~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~--~~W~~~r~~~ip~e~~~~~s~~  354 (524)
T KOG0601|consen  277 NFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKN--SSWSQLRQGYIPLEFCEGGSSS  354 (524)
T ss_pred             ccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCC--CCccccccccCchhhhcCcchh
Confidence            322      12257788999999999999999999999999999988877654311  1133344444444444444566


Q ss_pred             HHHHHHHhhh-CcCCCCCHHHHhcCCCCc
Q 010730          151 ARRFVGKCLE-NVSKRLPAKELLLDPFLA  178 (502)
Q Consensus       151 l~~LI~kcL~-dP~kRpSa~ELL~hPff~  178 (502)
                      +...+..++. ++..|++++.++.++++.
T Consensus       355 l~~~~~~~~d~~~~~~~~~q~~~~l~~i~  383 (524)
T KOG0601|consen  355 LRSVTSQMLDEDPRLRLTAQILTALNVIH  383 (524)
T ss_pred             hhhHHHHhcCcchhhhhHHHHHhcccccc
Confidence            7778888888 999999999999999886


No 429
>PRK10345 hypothetical protein; Provisional
Probab=98.87  E-value=4.3e-09  Score=102.60  Aligned_cols=63  Identities=24%  Similarity=0.221  Sum_probs=51.1

Q ss_pred             CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHH-HHHHhCCCCeEecCCCCCcEEEeCC---CCcEEEEecCCc
Q 010730            3 TSGTLREYRKKYTRVDIRAVKNWARQILRGI-AYLHGHDPPVIHRDLKCDNIFVNGH---LGQIKIGDLGLA   70 (502)
Q Consensus         3 tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL-~YLHs~g~~IIHRDLKPeNILl~~~---~g~vKL~DFGlA   70 (502)
                      .+|||.+++++. .+++.  ..++.|++.++ +|||+++  |+||||||+|||++..   .+.++|+||+.+
T Consensus        90 ~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~--IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345         90 PSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNR--IVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             cchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            468999999774 56666  36688999888 9999999  9999999999999742   247999995544


No 430
>smart00090 RIO RIO-like kinase.
Probab=98.78  E-value=7.3e-09  Score=102.52  Aligned_cols=71  Identities=23%  Similarity=0.230  Sum_probs=58.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR   74 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~   74 (502)
                      |+.|++|..+......+....+..++.||+.+|.+||.+| +|+||||||+||+++ + +.++|+|||.+....
T Consensus       129 ~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g-~iiH~Dikp~NIli~-~-~~i~LiDFg~a~~~~  199 (237)
T smart00090      129 FIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEG-ELVHGDLSEYNILVH-D-GKVVIIDVSQSVELD  199 (237)
T ss_pred             EecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcC-CEEeCCCChhhEEEE-C-CCEEEEEChhhhccC
Confidence            4567777776655556777788899999999999999876 499999999999998 4 689999999987543


No 431
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.67  E-value=4.1e-08  Score=97.26  Aligned_cols=63  Identities=21%  Similarity=0.275  Sum_probs=52.8

Q ss_pred             CCC-CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCcee
Q 010730            2 FTS-GTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI   72 (502)
Q Consensus         2 ~tg-GsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~   72 (502)
                      +.| ++|.+++.+ .++++..    +.||+.+|.+||..|  |+||||||+|||++.+ +.++|+|||.+..
T Consensus       128 l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~G--I~HrDlkp~NILv~~~-~~v~LIDfg~~~~  191 (239)
T PRK01723        128 IEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAG--VYHADLNAHNILLDPD-GKFWLIDFDRGEL  191 (239)
T ss_pred             cCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCC--CCCCCCCchhEEEcCC-CCEEEEECCCccc
Confidence            455 689999865 3566543    578999999999999  9999999999999876 6899999998865


No 432
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.65  E-value=5.6e-08  Score=92.52  Aligned_cols=64  Identities=27%  Similarity=0.404  Sum_probs=56.2

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCcee
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI   72 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~   72 (502)
                      |+.|++|.+++.....    ....++.+|+.+|.++|..+  ++|||++|.|||++ + +.++|+|||.+..
T Consensus        80 ~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~--i~H~Dl~p~Nil~~-~-~~~~liDf~~a~~  143 (211)
T PRK14879         80 YIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAG--IIHGDLTTSNMILS-G-GKIYLIDFGLAEF  143 (211)
T ss_pred             EeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCC--cccCCCCcccEEEE-C-CCEEEEECCcccC
Confidence            4679999999976443    77888999999999999998  99999999999998 3 6899999998864


No 433
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.61  E-value=4.4e-08  Score=93.25  Aligned_cols=65  Identities=25%  Similarity=0.195  Sum_probs=52.9

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR   74 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~   74 (502)
                      |+.|++|.+....      ..+..++.+|+.++.++|.++  |+||||||+||+++.+ +.++|+|||++....
T Consensus       112 ~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~g--i~H~Dl~p~Nill~~~-~~~~liDfg~~~~~~  176 (198)
T cd05144         112 YIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHG--IIHGDLSEFNILVDDD-EKIYIIDWPQMVSTD  176 (198)
T ss_pred             EeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCC--CCcCCCCcccEEEcCC-CcEEEEECCccccCC
Confidence            4567777665421      345678999999999999988  9999999999999875 799999999985543


No 434
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.59  E-value=3.6e-08  Score=108.82  Aligned_cols=151  Identities=19%  Similarity=0.307  Sum_probs=107.3

Q ss_pred             HHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCc----------ccccCCCcccCccccc
Q 010730           26 ARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA----------HSVIGTPEFMAPELYE   95 (502)
Q Consensus        26 ~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~----------~s~vGTp~Y~APEvl~   95 (502)
                      +.++..||.|+|.+ +++||++|.|++|.++.+ +..||+.|+.+....+....          ....-...|.|||.+.
T Consensus       105 l~~v~dgl~flh~s-Ak~VH~ni~p~~i~~na~-~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~  182 (700)
T KOG2137|consen  105 LGNVADGLAFLHRS-AKVVHGNIQPEAIVVNAN-GDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL  182 (700)
T ss_pred             hhcccchhhhhccC-cceeecccchhheeeccC-cceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence            45566899999977 469999999999999988 78999999988655432111          0112356799999776


Q ss_pred             c-CCCCcccchhHHHHHHHHh-hccCCCCCCCChHHHHHHhhcCCCC---CcccccccHHHHHHHHHhhh-CcCCCCCHH
Q 010730           96 E-DYNELVDIYSFGMCVLEML-TSEYPYSECSNPAQIYKKVTSGKLP---GAFHRIQDAEARRFVGKCLE-NVSKRLPAK  169 (502)
Q Consensus        96 ~-~ys~~~DIWSLGviLyeLL-TG~~Pf~~~~~~~ql~~kI~~g~~p---~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~  169 (502)
                      . ....++|++|+||.+|.+. .|+.-+.. .+.. ++.....+...   .......+.++++=+.++|. +...||++.
T Consensus       183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a-~~~~-~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~  260 (700)
T KOG2137|consen  183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAA-NGGL-LSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLD  260 (700)
T ss_pred             cccccccccceeeeeEEEEEecCCcchhhc-cCCc-chhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchh
Confidence            5 4778999999999999998 46655533 2211 12222221111   11223446788999999998 999999999


Q ss_pred             HHhcCCCCcCC
Q 010730          170 ELLLDPFLASD  180 (502)
Q Consensus       170 ELL~hPff~~~  180 (502)
                      +++..|||...
T Consensus       261 ~l~~~~ff~D~  271 (700)
T KOG2137|consen  261 LLLSIPFFSDP  271 (700)
T ss_pred             hhhcccccCCc
Confidence            99999999754


No 435
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.59  E-value=7.9e-08  Score=90.81  Aligned_cols=61  Identities=25%  Similarity=0.383  Sum_probs=52.7

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCcee
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI   72 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~   72 (502)
                      |+.|++|.+++.....       .++.||+.+|.+||+.+  ++|+|+||.||+++ + +.++++|||++..
T Consensus        78 ~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~g--i~H~Dl~~~Nil~~-~-~~~~liDfg~a~~  138 (199)
T TIGR03724        78 YIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAG--IVHGDLTTSNIIVR-D-DKLYLIDFGLGKY  138 (199)
T ss_pred             EECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCC--eecCCCCcceEEEE-C-CcEEEEECCCCcC
Confidence            4678999998865332       77999999999999998  99999999999998 4 7899999999865


No 436
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.55  E-value=9.1e-08  Score=105.15  Aligned_cols=61  Identities=21%  Similarity=0.339  Sum_probs=53.4

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceec
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAIL   73 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~   73 (502)
                      |+.|++|.+++.        ....++.||+.+|.|||+++  |+||||||+||+++ + +.++|+|||+++..
T Consensus       417 ~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~g--iiHrDlkp~NILl~-~-~~~~liDFGla~~~  477 (535)
T PRK09605        417 YIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAG--IVHGDLTTSNFIVR-D-DRLYLIDFGLGKYS  477 (535)
T ss_pred             ecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCC--CccCCCChHHEEEE-C-CcEEEEeCcccccC
Confidence            578999999886        35678999999999999998  99999999999994 3 68999999998653


No 437
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.50  E-value=1e-06  Score=93.06  Aligned_cols=155  Identities=20%  Similarity=0.310  Sum_probs=112.8

Q ss_pred             HhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccccCCCcccCc
Q 010730           12 KKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAP   91 (502)
Q Consensus        12 ~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~vGTp~Y~AP   91 (502)
                      +.++..+..-+.+.++.|+.+.+-||.+|  -+-+|+.++|+|+.+. +.|.|.|-.--.....+....+.+|.+.|.+|
T Consensus       109 qs~P~~~w~fllrvaRnlA~aFA~lH~~G--h~vGDVn~~~~lVsd~-~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPP  185 (637)
T COG4248         109 QSYPHCAWDFLLRVARNLASAFATLHEHG--HVVGDVNQNSFLVSDD-SKVVLVDSDSFQINANGTLHLCPVGVSEFTPP  185 (637)
T ss_pred             ccCCccccHHHHHHHHHHHHHHHHHHhcC--CcccccCccceeeecC-ceEEEEcccceeeccCCceEecccCccccCCH
Confidence            34566888899999999999999999999  8999999999999876 79999986543333344445667899999999


Q ss_pred             cccc-c-----CCCCcccchhHHHHHHHHhhc-cCCCCCC------CChHH--H------HHHh-hcCCCC---Cccccc
Q 010730           92 ELYE-E-----DYNELVDIYSFGMCVLEMLTS-EYPYSEC------SNPAQ--I------YKKV-TSGKLP---GAFHRI  146 (502)
Q Consensus        92 Evl~-~-----~ys~~~DIWSLGviLyeLLTG-~~Pf~~~------~~~~q--l------~~kI-~~g~~p---~~~~~~  146 (502)
                      |.-. +     .-....|.|.|||++++||.| +.||++.      .++.+  |      |.+- ..|..|   .+.+..
T Consensus       186 ElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~  265 (637)
T COG4248         186 ELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSM  265 (637)
T ss_pred             HHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhh
Confidence            9654 2     246678999999999999885 9999763      12211  1      1111 112222   122334


Q ss_pred             ccHHHHHHHHHhhh---CcCCCCCHH
Q 010730          147 QDAEARRFVGKCLE---NVSKRLPAK  169 (502)
Q Consensus       147 ~s~~l~~LI~kcL~---dP~kRpSa~  169 (502)
                      ..+.++.+..+|+.   ++.-||+++
T Consensus       266 Lpp~vqAlF~qaF~~~~~~~~RP~a~  291 (637)
T COG4248         266 LPPDVQALFQQAFTESGVATPRPTAK  291 (637)
T ss_pred             cCHHHHHHHHHHhcccCCCCCCCCHH
Confidence            57889999999997   356899954


No 438
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.47  E-value=2.2e-07  Score=86.73  Aligned_cols=51  Identities=27%  Similarity=0.307  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHHHHHHHHHh-CCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc
Q 010730           20 RAVKNWARQILRGIAYLHG-HDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR   74 (502)
Q Consensus        20 ~~i~~i~~QIL~gL~YLHs-~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~   74 (502)
                      ..++.++.+++.++.++|. ++  |+||||||+||+++ + +.++|+|||.+....
T Consensus       114 ~~~~~~~~~~~~~l~~lh~~~~--ivH~Dl~p~Nili~-~-~~~~liDfg~a~~~~  165 (187)
T cd05119         114 EDPEELYDQILELMRKLYREAG--LVHGDLSEYNILVD-D-GKVYIIDVPQAVEID  165 (187)
T ss_pred             ccHHHHHHHHHHHHHHHhhccC--cCcCCCChhhEEEE-C-CcEEEEECccccccc
Confidence            6678899999999999999 87  99999999999999 4 789999999996543


No 439
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.36  E-value=2.5e-07  Score=100.55  Aligned_cols=167  Identities=22%  Similarity=0.209  Sum_probs=118.1

Q ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcc
Q 010730            1 MFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH   80 (502)
Q Consensus         1 ~~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~   80 (502)
                      |+.+|++...+.--..+++...+.+..|++.++.++|+..  ++|+|+||+||++..+.+..+++|||..+.+.-.  ..
T Consensus       347 ~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~--~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~--~~  422 (524)
T KOG0601|consen  347 FCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKL--FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS--SG  422 (524)
T ss_pred             hhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchh--hhcccccccceeeccchhhhhcccccccccccee--cc
Confidence            4567777777755566889999999999999999999988  9999999999999875467899999988643211  11


Q ss_pred             cccCCCccc-Ccccccc--CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHHHHHH
Q 010730           81 SVIGTPEFM-APELYEE--DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGK  157 (502)
Q Consensus        81 s~vGTp~Y~-APEvl~~--~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~LI~k  157 (502)
                      ...++-.++ ..|++..  .+..++|++|||..+.+.+++.. +..   ....+..|..+..+.....  ...++.+...
T Consensus       423 ~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~-ls~---~~~~~~~i~~~~~p~~~~~--~~~~q~~~kv  496 (524)
T KOG0601|consen  423 VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSP-LSE---SGVQSLTIRSGDTPNLPGL--KLQLQVLLKV  496 (524)
T ss_pred             cccccccccccchhhccccccccccccccccccccccccCcc-cCc---ccccceeeecccccCCCch--HHhhhhhhhh
Confidence            122333444 3554433  37889999999999999999863 322   1222445666666532221  2456666677


Q ss_pred             hhh-CcCCCCCHHHHhcCCCC
Q 010730          158 CLE-NVSKRLPAKELLLDPFL  177 (502)
Q Consensus       158 cL~-dP~kRpSa~ELL~hPff  177 (502)
                      ++. ++..|+.+.++..|+-|
T Consensus       497 ~~~~~~~~~~l~~~l~~~~~~  517 (524)
T KOG0601|consen  497 MINPDRKRRPSAVELSLHSEF  517 (524)
T ss_pred             hcCCccccchhhhhhcccchh
Confidence            776 88999999998887654


No 440
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves 
Probab=98.17  E-value=3e-06  Score=74.00  Aligned_cols=54  Identities=26%  Similarity=0.226  Sum_probs=45.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHHhCC-CCeEecCCCCCcEEEeCCCCcEEEEecCCcee
Q 010730           18 DIRAVKNWARQILRGIAYLHGHD-PPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI   72 (502)
Q Consensus        18 ~e~~i~~i~~QIL~gL~YLHs~g-~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~   72 (502)
                      +......++.+++.+|.++|... .+++|+||||.||+++.. +.++++|||.+..
T Consensus        84 ~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~-~~~~l~Df~~~~~  138 (155)
T cd05120          84 SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDG-KILGIIDWEYAGY  138 (155)
T ss_pred             CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECC-cEEEEEecccccC
Confidence            44667788999999999999752 349999999999999875 7899999998854


No 441
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=97.91  E-value=2.5e-05  Score=75.64  Aligned_cols=55  Identities=20%  Similarity=0.252  Sum_probs=47.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHH-HhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc
Q 010730           16 RVDIRAVKNWARQILRGIAYL-HGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR   74 (502)
Q Consensus        16 ~L~e~~i~~i~~QIL~gL~YL-Hs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~   74 (502)
                      .++.+.+..++.|++.+|..| |..+  |||+||++.||++..  +.+.|+|||.+....
T Consensus       120 ~~~~~~~~~i~~~i~~~l~~l~H~~g--lVHGDLs~~NIL~~~--~~v~iIDF~qav~~~  175 (197)
T cd05146         120 KLNDEEMKNAYYQVLSMMKQLYKECN--LVHADLSEYNMLWHD--GKVWFIDVSQSVEPT  175 (197)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEEC--CcEEEEECCCceeCC
Confidence            456667778899999999999 8888  999999999999974  579999999886553


No 442
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=97.73  E-value=3e-05  Score=70.79  Aligned_cols=47  Identities=21%  Similarity=0.242  Sum_probs=39.7

Q ss_pred             HHHHHHHHHHHHHHHhCCC---CeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730           23 KNWARQILRGIAYLHGHDP---PVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus        23 ~~i~~QIL~gL~YLHs~g~---~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      ..++.+|+.+|..||..+.   .++|+|++|.||++++  +.++++|||.+.
T Consensus        86 ~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~--~~~~liDf~~a~  135 (170)
T cd05151          86 PENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDD--GRLWLIDWEYAG  135 (170)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEEC--CeEEEEeccccc
Confidence            4457899999999998762   2599999999999983  579999999875


No 443
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=97.70  E-value=0.00011  Score=74.44  Aligned_cols=65  Identities=18%  Similarity=0.211  Sum_probs=54.8

Q ss_pred             cHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeC------CCCcEEEEecCCcee
Q 010730            6 TLREYRKK--YTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNG------HLGQIKIGDLGLAAI   72 (502)
Q Consensus         6 sL~~yi~k--~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~------~~g~vKL~DFGlA~~   72 (502)
                      +|.+++..  ....+......++.+|...+.-||..|  |+|+||++.|||++.      ....+.|+||+.+..
T Consensus       122 sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G--i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        122 SLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG--INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             cHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc--CccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            78899864  345667788899999999999999999  999999999999974      235799999998753


No 444
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=97.68  E-value=6.2e-05  Score=81.19  Aligned_cols=68  Identities=25%  Similarity=0.280  Sum_probs=50.7

Q ss_pred             CCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHH-HHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc
Q 010730            1 MFTSGTLREYRKKY-TRVDIRAVKNWARQILR-GIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR   74 (502)
Q Consensus         1 ~~tgGsL~~yi~k~-~~L~e~~i~~i~~QIL~-gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~   74 (502)
                      |+.|++|.++.... ..++.   ..++.+++. .+..+|..|  ++|+|+||.||+++.+ +.++++|||++..+.
T Consensus       239 ~i~G~~L~~~~~~~~~~~~~---~~ia~~~~~~~l~ql~~~g--~~H~D~hPgNilv~~~-g~i~liDfG~~~~l~  308 (437)
T TIGR01982       239 WIDGIPLSDIAALDEAGLDR---KALAENLARSFLNQVLRDG--FFHADLHPGNIFVLKD-GKIIALDFGIVGRLS  308 (437)
T ss_pred             eECCcccccHHHHHhcCCCH---HHHHHHHHHHHHHHHHhCC--ceeCCCCcccEEECCC-CcEEEEeCCCeeECC
Confidence            56788888876532 12332   334555555 467889888  9999999999999876 799999999987654


No 445
>PF06293 Kdo:  Lipopolysaccharide kinase (Kdo/WaaP) family;  InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=97.66  E-value=0.0001  Score=71.32  Aligned_cols=67  Identities=25%  Similarity=0.316  Sum_probs=58.0

Q ss_pred             CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCC--CcEEEEecCCceec
Q 010730            5 GTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHL--GQIKIGDLGLAAIL   73 (502)
Q Consensus         5 GsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~--g~vKL~DFGlA~~~   73 (502)
                      -+|.+++......+......++.+|...+.-||..|  |+|+|+++.|||++...  ..+.++||+.+...
T Consensus       103 ~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~~g--i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  103 QDLRDLLQQWEQLDPSQRRELLRALARLIAKLHDAG--IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             ccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHCc--CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            479999987656788888999999999999999999  99999999999998762  26899999987653


No 446
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.59  E-value=0.00019  Score=83.96  Aligned_cols=166  Identities=23%  Similarity=0.360  Sum_probs=115.3

Q ss_pred             CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCC---cEEEeCCCCcEEEE--ecCCceeccCC
Q 010730            2 FTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCD---NIFVNGHLGQIKIG--DLGLAAILRGS   76 (502)
Q Consensus         2 ~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPe---NILl~~~~g~vKL~--DFGlA~~~~~~   76 (502)
                      +++-++...+..-+.++...++.|..++++||.|+|++.  ..|.-|...   +.-.++. +.+.+.  ||+..+.+...
T Consensus       268 ~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~--l~~v~L~~s~~~~~~~~~e-~~~~~sl~~~~ss~~l~d~  344 (1351)
T KOG1035|consen  268 CSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLS--LEHVVLSASSSKESTVDGE-GVVAISLSDFDSSKPLPDN  344 (1351)
T ss_pred             cCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhc--cceeEEecccccccccCcc-ceeecchhhhcccccCCCc
Confidence            456678888888889999999999999999999999875  555544433   2222332 355555  88877766555


Q ss_pred             CCcccccCCCcccCccccccC---CCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccccccHHHHH
Q 010730           77 QQAHSVIGTPEFMAPELYEED---YNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARR  153 (502)
Q Consensus        77 ~~~~s~vGTp~Y~APEvl~~~---ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~~~s~~l~~  153 (502)
                      .......-+..+.++|....+   .....|+|.+|..+..+..|..+-..    ......+        +.........+
T Consensus       345 ~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~----~~~~~~~--------l~~~~~~~~~d  412 (1351)
T KOG1035|consen  345 EKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEK----SAVPVSL--------LDVLSTSELLD  412 (1351)
T ss_pred             ccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCccccc----ccchhhh--------hccccchhhhh
Confidence            545555667788899987654   33346999999999999888755321    1111111        11111125678


Q ss_pred             HHHHhhh-CcCCCCCHHHHhcCCCCcCCCC
Q 010730          154 FVGKCLE-NVSKRLPAKELLLDPFLASDAG  182 (502)
Q Consensus       154 LI~kcL~-dP~kRpSa~ELL~hPff~~~~~  182 (502)
                      ++.+|+. ++.+|+++.+++.|+|++....
T Consensus       413 ~~~~~~~~~~~~Rl~~~~ll~~~f~~~~~~  442 (1351)
T KOG1035|consen  413 ALPKCLDEDSEERLSALELLTHPFLRFPTD  442 (1351)
T ss_pred             hhhhhcchhhhhccchhhhhhchhcccccc
Confidence            8889997 8999999999999999976543


No 447
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=97.39  E-value=0.00019  Score=79.34  Aligned_cols=65  Identities=20%  Similarity=0.255  Sum_probs=48.8

Q ss_pred             CCCCCcHHHH--HHhCC----CCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCC----cEEEEecCCc
Q 010730            1 MFTSGTLREY--RKKYT----RVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLG----QIKIGDLGLA   70 (502)
Q Consensus         1 ~~tgGsL~~y--i~k~~----~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g----~vKL~DFGlA   70 (502)
                      |+.|+.|.++  +...+    .+.+..+..++.||+.       .|  ++|+|+||.||+++.+ +    .++++|||++
T Consensus       242 ~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~-------~G--ffHaDpHPGNIlv~~~-g~~~~~i~llDFGiv  311 (537)
T PRK04750        242 RMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFR-------DG--FFHADMHPGNIFVSYD-PPENPRYIALDFGIV  311 (537)
T ss_pred             eecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHh-------CC--eeeCCCChHHeEEecC-CCCCCeEEEEecceE
Confidence            5688898774  33333    3555566667777753       56  9999999999999876 4    8999999999


Q ss_pred             eeccC
Q 010730           71 AILRG   75 (502)
Q Consensus        71 ~~~~~   75 (502)
                      ..+..
T Consensus       312 g~l~~  316 (537)
T PRK04750        312 GSLNK  316 (537)
T ss_pred             EECCH
Confidence            87643


No 448
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=97.33  E-value=0.00075  Score=75.16  Aligned_cols=105  Identities=25%  Similarity=0.352  Sum_probs=72.9

Q ss_pred             HHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCC-cccccCC
Q 010730            7 LREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-AHSVIGT   85 (502)
Q Consensus         7 L~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~-~~s~vGT   85 (502)
                      |..|+++   +....+..-+.||+.||.|||..+ .++|++|.-+.|+++.. |..||++|.++........ .....--
T Consensus        94 l~~~lk~---l~~~~v~~Gl~qIl~AL~FL~~d~-~lvHgNv~~~SVfVn~~-GeWkLggle~v~~~~~~~~~~~~~~~~  168 (690)
T KOG1243|consen   94 LETVLKE---LGKEEVCLGLFQILAALSFLNDDC-NLVHGNVCKDSVFVNES-GEWKLGGLELVSKASGFNAPAKSLYLI  168 (690)
T ss_pred             HHHHHHH---hHHHHHHHHHHHHHHHHHHHhccC-CeeeccEeeeeEEEcCC-CcEEEeeeEEEeccccCCcccccchhh
Confidence            3445544   335677777999999999998542 39999999999999987 8999999998755433221 1111112


Q ss_pred             CcccCccccccCCCCcccchhHHHHHHHHhhc
Q 010730           86 PEFMAPELYEEDYNELVDIYSFGMCVLEMLTS  117 (502)
Q Consensus        86 p~Y~APEvl~~~ys~~~DIWSLGviLyeLLTG  117 (502)
                      -.|..|+.+... .-..|.|-|||++++++.|
T Consensus       169 ~s~~~P~~~~~s-~~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  169 ESFDDPEEIDPS-EWSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             hcccChhhcCcc-ccchhhhhHHHHHHHHhCc
Confidence            234455433211 1357999999999999998


No 449
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.33  E-value=0.00045  Score=66.56  Aligned_cols=60  Identities=25%  Similarity=0.414  Sum_probs=46.8

Q ss_pred             CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCcee
Q 010730            2 FTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI   72 (502)
Q Consensus         2 ~tgGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~   72 (502)
                      ..|-.|++++...   .    ..+++.|-.-+.-||..|  |+|+||.++||++.+.  .+.++||||+..
T Consensus        81 I~G~~lkd~l~~~---~----~~~~r~vG~~vg~lH~~g--ivHGDLTtsNiIl~~~--~i~~IDfGLg~~  140 (204)
T COG3642          81 IEGELLKDALEEA---R----PDLLREVGRLVGKLHKAG--IVHGDLTTSNIILSGG--RIYFIDFGLGEF  140 (204)
T ss_pred             eCChhHHHHHHhc---c----hHHHHHHHHHHHHHHhcC--eecCCCccceEEEeCC--cEEEEECCcccc
Confidence            3456677777664   1    345666666677899998  9999999999999875  599999999864


No 450
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.29  E-value=0.0006  Score=65.79  Aligned_cols=65  Identities=29%  Similarity=0.447  Sum_probs=52.5

Q ss_pred             cHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcE--EEEecCCcee
Q 010730            6 TLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQI--KIGDLGLAAI   72 (502)
Q Consensus         6 sL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~v--KL~DFGlA~~   72 (502)
                      ++++|+...  .....+....++++|-+.|.-||..+  |||+||..+||++..+.+.+  .++|||++..
T Consensus        97 ~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd--iiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   97 TVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND--IIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             HHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC--eecccccccceEEecCCCcCceEEEeecchhc
Confidence            889999764  23344444788999999999999999  99999999999997764444  8999999743


No 451
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=96.69  E-value=0.011  Score=64.61  Aligned_cols=132  Identities=16%  Similarity=0.259  Sum_probs=93.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccccCCCcccCcccc
Q 010730           15 TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELY   94 (502)
Q Consensus        15 ~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~vGTp~Y~APEvl   94 (502)
                      ...++..+|.|+.||..||.++|+.|  +.=+-|.|.+|+++++. +++|...|+...+....      +       +-+
T Consensus       388 ~~~~e~~lW~y~~QLtaaL~sIHssG--LAck~L~~~kIlv~G~~-RIriS~C~i~Dvl~~d~------~-------~~l  451 (655)
T KOG3741|consen  388 LKAPEEVLWSYISQLTAALYSIHSSG--LACKTLDLKKILVTGKM-RIRISGCGIMDVLQEDP------T-------EPL  451 (655)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcC--ceeecccHhHeEeeCcc-eEEEecccceeeecCCC------C-------cch
Confidence            35788999999999999999999999  77799999999999884 89999888877664432      1       111


Q ss_pred             ccCCCCcccchhHHHHHHHHhhccCCCCCCCChHHH-HHHhhcCCCCCcccccccHHHHHHHHHhhh-CcCCCCCHHHHh
Q 010730           95 EEDYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQI-YKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELL  172 (502)
Q Consensus        95 ~~~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql-~~kI~~g~~p~~~~~~~s~~l~~LI~kcL~-dP~kRpSa~ELL  172 (502)
                      ++  -.+-|.-.||.+++.|.||..--.......+. .+         .+....+.+++++|.-+.. ++.. -++.++|
T Consensus       452 e~--~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~---------~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~ll  519 (655)
T KOG3741|consen  452 ES--QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLT---------RITTTYSTDLRNVVEYLESLNFRE-KSIQDLL  519 (655)
T ss_pred             hH--HhhhhHHHHHHHHHHHhhcccccccccchHHHHHH---------HhhhhhhHHHHHHHHHHHhcCccc-ccHHHHH
Confidence            11  13458889999999999996331111112221 11         2234457788999988776 5654 6788887


Q ss_pred             cC
Q 010730          173 LD  174 (502)
Q Consensus       173 ~h  174 (502)
                      .+
T Consensus       520 p~  521 (655)
T KOG3741|consen  520 PM  521 (655)
T ss_pred             HH
Confidence            65


No 452
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=96.48  E-value=0.0036  Score=59.21  Aligned_cols=32  Identities=22%  Similarity=0.423  Sum_probs=26.1

Q ss_pred             CCeEecCCCCCcEEEeCC-CCcEEEEecCCcee
Q 010730           41 PPVIHRDLKCDNIFVNGH-LGQIKIGDLGLAAI   72 (502)
Q Consensus        41 ~~IIHRDLKPeNILl~~~-~g~vKL~DFGlA~~   72 (502)
                      ..++|+|++|.||+++.+ .+.+.|+||+.+..
T Consensus       174 ~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         174 PGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             cEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence            358999999999999873 25689999998753


No 453
>PRK09902 hypothetical protein; Provisional
Probab=96.44  E-value=0.0073  Score=59.42  Aligned_cols=65  Identities=11%  Similarity=0.114  Sum_probs=54.4

Q ss_pred             CcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCc--EEEEecCCcee
Q 010730            5 GTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQ--IKIGDLGLAAI   72 (502)
Q Consensus         5 GsL~~yi~k~--~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~--vKL~DFGlA~~   72 (502)
                      -+|.+++.+.  .+.+......++.+|...|.-||..|  +.|+|+-+.||+++.. +.  ++++||.-++.
T Consensus       111 ~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G--v~Hgdly~khIll~~~-g~~~v~lIDlEk~r~  179 (216)
T PRK09902        111 ISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN--RQHGCCYVRHIYVKTE-GKAEAGFLDLEKSRR  179 (216)
T ss_pred             ccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHhheeecCC-CCeeEEEEEhhccch
Confidence            5788888663  35677778899999999999999999  9999999999999754 45  99999986643


No 454
>PF01163 RIO1:  RIO1 family;  InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date.   Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=96.42  E-value=0.0085  Score=57.67  Aligned_cols=51  Identities=31%  Similarity=0.382  Sum_probs=38.3

Q ss_pred             HHHHHHHHHHHHHHHH-HHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc
Q 010730           20 RAVKNWARQILRGIAY-LHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR   74 (502)
Q Consensus        20 ~~i~~i~~QIL~gL~Y-LHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~   74 (502)
                      +....++.+++..+.. +|..|  |+|+||.+.||+++.+  .+.|+|||.+....
T Consensus       106 ~~~~~~~~~il~~~~~~~~~~g--ivHGDLs~~NIlv~~~--~~~iIDf~qav~~~  157 (188)
T PF01163_consen  106 EEPKELLEEILEEIIKMLHKAG--IVHGDLSEYNILVDDG--KVYIIDFGQAVDSS  157 (188)
T ss_dssp             STHHHHHHHHHHHHHHHHHCTT--EEESS-STTSEEEETT--CEEE--GTTEEETT
T ss_pred             hhHHHHHHHHHHHHHHHHHhcC--ceecCCChhhEEeecc--eEEEEecCcceecC
Confidence            4566778888885555 57877  9999999999999875  79999999886543


No 455
>PF12202 OSR1_C:  Oxidative-stress-responsive kinase 1 C terminal;  InterPro: IPR024678 Oxidative-stress-responsive kinase 1 (OSR1) is involved in the signalling cascade which activates Na/K/2Cl co-transporter during osmotic stress. This entry represents the CCT domain found in OSR1, STE20/SPS1-related kinase and in WNK activators []. This domain is found in eukaryotes, and is approximately 40 amino acids in length. There is a single completely conserved residue F that may be functionally important. ; PDB: 2V3S_A 2LRU_A.
Probab=96.39  E-value=0.0029  Score=45.15  Aligned_cols=32  Identities=41%  Similarity=0.580  Sum_probs=26.4

Q ss_pred             eEEEEEEEcCCC------CeeeeccCCCcccccHHHHH
Q 010730          234 IFLKVQITDKDG------QARNIYFPFDIFNDTATEVA  265 (502)
Q Consensus       234 i~L~l~i~d~~G------~~~~i~f~fd~~~Dt~~~VA  265 (502)
                      |.|+||+.|+.+      +...|+|.|++..|++.+||
T Consensus         1 i~l~Lrv~d~kK~~~k~ken~aI~F~F~~~~D~~e~VA   38 (38)
T PF12202_consen    1 INLRLRVRDPKKRKGKHKENEAIEFEFDLGKDTAEEVA   38 (38)
T ss_dssp             EEEEEEEC-TTSSSSS--TCEEEEEEEETTT--HHHHH
T ss_pred             CcEEEEEeccccccCccccCccEEEEEecCCCcccccC
Confidence            578999999988      78899999999999999997


No 456
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.29  E-value=0.0009  Score=80.22  Aligned_cols=170  Identities=13%  Similarity=0.055  Sum_probs=115.1

Q ss_pred             CCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhC---CCCeEecCCCCCcEEEeCCCCcEEEEecCCceec-
Q 010730            2 FTSGTLREYRKKY----TRVDIRAVKNWARQILRGIAYLHGH---DPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAIL-   73 (502)
Q Consensus         2 ~tgGsL~~yi~k~----~~L~e~~i~~i~~QIL~gL~YLHs~---g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~-   73 (502)
                      +.+|.++..|-+.    ++++..-+....++.+.+..-+|++   |--.+|++||+-|.++..+ ..+|++++|+.++. 
T Consensus      1313 ~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtn-y~v~~gk~gLdKIkn 1391 (2724)
T KOG1826|consen 1313 VEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTN-YNVKLGKGGLDKIKN 1391 (2724)
T ss_pred             HHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecC-CcccccccccccccC
Confidence            3567888887543    4566666666666667777777743   2247899999999999988 58999999999943 


Q ss_pred             cCCCCcccccCCCcccCcccccc-CCCCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCC----CCccccccc
Q 010730           74 RGSQQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKL----PGAFHRIQD  148 (502)
Q Consensus        74 ~~~~~~~s~vGTp~Y~APEvl~~-~ys~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~----p~~~~~~~s  148 (502)
                      ......+..++++.|+.|++... +++.+.|+|..|+-+|.+-.|..+|-.      ..+.+..|..    ....+...+
T Consensus      1392 p~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~fi~------flq~~Lkgiidn~tf~sIe~l~p 1465 (2724)
T KOG1826|consen 1392 PVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYFIF------FLQPALKGIIDNHTFFSIEKLKP 1465 (2724)
T ss_pred             chHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHHHH------HHHHHHcCcccccccccccccCC
Confidence            33334567789999999998864 577779999999999999888877632      2333333332    223333322


Q ss_pred             HHHHHHHHHhhh-CcCCCCCHHHHhcCCCCc
Q 010730          149 AEARRFVGKCLE-NVSKRLPAKELLLDPFLA  178 (502)
Q Consensus       149 ~~l~~LI~kcL~-dP~kRpSa~ELL~hPff~  178 (502)
                      .++..+...+|- +-..||.....+.-+.+.
T Consensus      1466 gdaNve~~~~Ll~K~~~rp~q~isls~d~~a 1496 (2724)
T KOG1826|consen 1466 GDANVEALHRLLWKYMERPGQYISLSRDHFA 1496 (2724)
T ss_pred             CcccHHHHHHHHHHhhhcchhhhhccccccc
Confidence            333333333333 566788888888766664


No 457
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=96.11  E-value=0.0012  Score=73.33  Aligned_cols=149  Identities=21%  Similarity=0.283  Sum_probs=102.5

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccCCCCcccccCCCcccCccccc-cCCC
Q 010730           21 AVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYE-EDYN   99 (502)
Q Consensus        21 ~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~~~~~~s~vGTp~Y~APEvl~-~~ys   99 (502)
                      +.....+.-+.+|+|+|+.-  -+|||    ||+...  +.+|..+|+....+.......+..+|+.++|||+.. ..+.
T Consensus       337 ~~~~~~r~et~~l~~l~~~~--~~~~d----~~l~s~--~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~  408 (829)
T KOG0576|consen  337 QFAYPLRKETRPLAELHSSY--KVHRD----NILGSE--EEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTID  408 (829)
T ss_pred             hhhhhhhhhccccccccccc--ccCcc----cccccc--cccccccccCCcccCcccccccCCCCCCCCCchhhcccccc
Confidence            44455666677899999864  48888    777765  579999999998887666677889999999999664 5689


Q ss_pred             CcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCCcccc--cccHH-HHHHHHHhhh-CcCCCCCHHHHhcCC
Q 010730          100 ELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPGAFHR--IQDAE-ARRFVGKCLE-NVSKRLPAKELLLDP  175 (502)
Q Consensus       100 ~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~~~~~--~~s~~-l~~LI~kcL~-dP~kRpSa~ELL~hP  175 (502)
                      ...|.|++|+-..+|.-|.+|-..   +......+..+.-...+..  ..++. -+++...|+. .|..|+....++.+.
T Consensus       409 ~~p~~~~~~~~~~~~ap~~pPr~~---P~~~~~~~g~~p~s~~L~~~~aw~~~~~~~~~~~~~~g~P~~pkv~mgacfsK  485 (829)
T KOG0576|consen  409 GCPDSGSLAVSAIQMAPGLPPRSS---PPAVLPMIGNGPNSPMLTDKSAWSPVFHRDFPAPCLNGLPPTPKVHMGACFSK  485 (829)
T ss_pred             cCCCccCCCcchhhcCCCCCCCCC---CccccCCCCCCCCccccchhhhcCcccccCCcccccCCCCCCCcchhhHHHHH
Confidence            999999999987888888877543   1111111111110000000  01111 1247778888 899999999999999


Q ss_pred             CCcCC
Q 010730          176 FLASD  180 (502)
Q Consensus       176 ff~~~  180 (502)
                      +|..-
T Consensus       486 vfngC  490 (829)
T KOG0576|consen  486 VFNGC  490 (829)
T ss_pred             HhccC
Confidence            98653


No 458
>PF06176 WaaY:  Lipopolysaccharide core biosynthesis protein (WaaY);  InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=94.70  E-value=0.051  Score=53.95  Aligned_cols=43  Identities=30%  Similarity=0.362  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730           25 WARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus        25 i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      +...|..++.-||..|  ++|+|..|.|++++.+  .++++||+..+
T Consensus       140 ~~~ki~~~ikqlH~~G--~~HGD~hpgNFlv~~~--~i~iID~~~k~  182 (229)
T PF06176_consen  140 LAEKIVEAIKQLHKHG--FYHGDPHPGNFLVSNN--GIRIIDTQGKR  182 (229)
T ss_pred             HHHHHHHHHHHHHHcC--CccCCCCcCcEEEECC--cEEEEECcccc
Confidence            3466778899999999  9999999999999864  69999998654


No 459
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=91.75  E-value=0.57  Score=47.32  Aligned_cols=32  Identities=22%  Similarity=0.253  Sum_probs=26.5

Q ss_pred             CCCeEecCCCCCcEEEeCC---CCcEEEEecCCce
Q 010730           40 DPPVIHRDLKCDNIFVNGH---LGQIKIGDLGLAA   71 (502)
Q Consensus        40 g~~IIHRDLKPeNILl~~~---~g~vKL~DFGlA~   71 (502)
                      ...++|+|+.+.||+++.+   .+.+.++||..|.
T Consensus       178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            3458999999999999863   3579999999874


No 460
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=91.09  E-value=0.36  Score=49.47  Aligned_cols=51  Identities=25%  Similarity=0.312  Sum_probs=39.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730           18 DIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus        18 ~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      +.+.+..++..|+.-+.-+-..|  |||+|+.+=||+++.+ |.+.++||--+.
T Consensus       200 ~~en~~~il~~il~~~~~~~~~G--iVHGDlSefNIlV~~d-g~~~vIDwPQ~v  250 (304)
T COG0478         200 DVENPDEILDKILEEVRKAYRRG--IVHGDLSEFNILVTED-GDIVVIDWPQAV  250 (304)
T ss_pred             cccCHHHHHHHHHHHHHHHHHcC--ccccCCchheEEEecC-CCEEEEeCcccc
Confidence            35556666777777666555666  9999999999999987 789999997654


No 461
>PF12260 PIP49_C:  Protein-kinase domain of FAM69;  InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=90.30  E-value=0.61  Score=44.76  Aligned_cols=57  Identities=23%  Similarity=0.128  Sum_probs=47.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCC-CeEecCCCCCcEEEeCCCCcEEEEecCCceec
Q 010730           16 RVDIRAVKNWARQILRGIAYLHGHDP-PVIHRDLKCDNIFVNGHLGQIKIGDLGLAAIL   73 (502)
Q Consensus        16 ~L~e~~i~~i~~QIL~gL~YLHs~g~-~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~   73 (502)
                      .-++....+++.+++..+.+|+..-. .+.-.|++++|+-++.+ +.+|++|...+...
T Consensus        55 ~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~-~~lk~iDld~v~~~  112 (188)
T PF12260_consen   55 QSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDD-GRLKLIDLDDVFVE  112 (188)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCC-CcEEEEechhcchh
Confidence            35788999999999999999996311 28889999999999976 79999999877543


No 462
>PF01636 APH:  Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.;  InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=90.24  E-value=0.57  Score=44.10  Aligned_cols=33  Identities=39%  Similarity=0.459  Sum_probs=21.8

Q ss_pred             CCCeEecCCCCCcEEEeCCCCcEEEEecCCcee
Q 010730           40 DPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI   72 (502)
Q Consensus        40 g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~   72 (502)
                      ...++|+|+.|.||+++...+.+-|+||+.+..
T Consensus       165 ~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  165 PPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             CEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             CcEEEEeccccccceeeeccceeEEEecccceE
Confidence            345999999999999994336678999987754


No 463
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=89.25  E-value=0.75  Score=44.87  Aligned_cols=30  Identities=27%  Similarity=0.344  Sum_probs=24.3

Q ss_pred             CCeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730           41 PPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus        41 ~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      +.++|+|+.+.||++++. +..-|+||+.+.
T Consensus       164 ~~l~HGD~~~~Nvlv~~~-~i~giIDw~~a~  193 (235)
T cd05155         164 PVWFHGDLAPGNLLVQDG-RLSAVIDFGCLG  193 (235)
T ss_pred             ceEEeCCCCCCcEEEECC-CEEEEEeCcccC
Confidence            348999999999999864 344699999874


No 464
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=88.83  E-value=0.61  Score=45.10  Aligned_cols=30  Identities=30%  Similarity=0.329  Sum_probs=25.7

Q ss_pred             CeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730           42 PVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus        42 ~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      .++|+|+.+.|||++++.+.+.|+||..|.
T Consensus       171 ~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         171 VFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            499999999999999733579999998774


No 465
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=88.80  E-value=1.1  Score=44.12  Aligned_cols=31  Identities=26%  Similarity=0.417  Sum_probs=25.8

Q ss_pred             CCCCeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730           39 HDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus        39 ~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      ..+.++|+|+.|.||++++. + +.++||+.+.
T Consensus       151 ~~~~~~HgD~~~~Nii~~~~-~-~~iIDwe~a~  181 (226)
T TIGR02172       151 DTSTCLHGDFQIGNLITSGK-G-TYWIDLGDFG  181 (226)
T ss_pred             CCCceEecCCCCCcEEEcCC-C-cEEEechhcC
Confidence            34458899999999999875 4 9999999774


No 466
>PRK05231 homoserine kinase; Provisional
Probab=88.53  E-value=0.9  Score=46.25  Aligned_cols=29  Identities=34%  Similarity=0.399  Sum_probs=24.3

Q ss_pred             CeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730           42 PVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus        42 ~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      ++||+|+.|.||+++++ ...-|+||+.+.
T Consensus       188 ~liHgD~~~~Nil~~~~-~~~~iIDf~~~~  216 (319)
T PRK05231        188 GVIHADLFRDNVLFEGD-RLSGFIDFYFAC  216 (319)
T ss_pred             ccCCCCCCCCcEEEECC-ceEEEEeccccc
Confidence            59999999999999865 345799999874


No 467
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=87.97  E-value=1.2  Score=44.78  Aligned_cols=29  Identities=17%  Similarity=0.350  Sum_probs=24.7

Q ss_pred             CCeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730           41 PPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus        41 ~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      .+++|+|+.+.||+++.  +.+.|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~--~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD--NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC--CcEEEEECcccc
Confidence            45999999999999986  468999999663


No 468
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=87.65  E-value=1  Score=50.02  Aligned_cols=67  Identities=19%  Similarity=0.268  Sum_probs=42.6

Q ss_pred             CCCcHHHH--HHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCceeccC
Q 010730            3 TSGTLREY--RKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG   75 (502)
Q Consensus         3 tgGsL~~y--i~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~~   75 (502)
                      .|-.+.+.  ++. ..++.+.+...+.++.-  .-+=..|  ++|.|..|.||+++.+ |++.+.|||+...+..
T Consensus       249 ~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f~--~q~~~dg--ffHaDpHpGNi~v~~~-g~i~~lDfGi~g~l~~  317 (517)
T COG0661         249 DGIKISDIAALKS-AGIDRKELAELLVRAFL--RQLLRDG--FFHADPHPGNILVRSD-GRIVLLDFGIVGRLDP  317 (517)
T ss_pred             CCEecccHHHHHh-cCCCHHHHHHHHHHHHH--HHHHhcC--ccccCCCccceEEecC-CcEEEEcCcceecCCH
Confidence            34444444  333 44565444433333321  1111246  9999999999999988 8999999999876643


No 469
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=86.62  E-value=1.1  Score=45.53  Aligned_cols=30  Identities=33%  Similarity=0.417  Sum_probs=25.5

Q ss_pred             CCeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730           41 PPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus        41 ~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      .+++|+|+.+.||+++.+ +.+.|+||+.+.
T Consensus       187 ~~l~HgD~~~~Nvl~~~~-~~~~vIDfd~~~  216 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGD-SVKGVIDFYFAC  216 (307)
T ss_pred             CccCCCCCCcCcEEEECC-ceEEEeeccccc
Confidence            459999999999999876 456899999763


No 470
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=85.78  E-value=0.47  Score=52.97  Aligned_cols=53  Identities=26%  Similarity=0.425  Sum_probs=47.7

Q ss_pred             eeeeccCCCcccccHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHhhCCCccc
Q 010730          247 ARNIYFPFDIFNDTATEVALEMVKELEITDWEPLEIAEMIEQEISSLVPNWKE  299 (502)
Q Consensus       247 ~~~i~f~fd~~~Dt~~~VA~EMV~~l~l~~~d~~~ia~~Id~~i~~l~p~~~~  299 (502)
                      .+.|.|.|++.+|+..+||.|||++..+.+.|-..+|+.|...+.+|--....
T Consensus       336 ~n~i~~~~~~~~D~~e~v~~em~~~~~~~edd~~~v~r~~~~~~~~ikgkr~~  388 (632)
T KOG0584|consen  336 ANAIQFDYNLNTDESEEVAQEMVEEEIVSEDDSREVARLLKDTVFSIKGKRND  388 (632)
T ss_pred             cccccceeecCCCchhHHHHHHHHhccCCcchHHHHHHHhccceeeechhhhc
Confidence            45789999999999999999999999999999999999999999888866643


No 471
>PF10707 YrbL-PhoP_reg:  PhoP regulatory network protein YrbL;  InterPro: IPR019647  This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. 
Probab=84.73  E-value=2.5  Score=41.07  Aligned_cols=56  Identities=29%  Similarity=0.412  Sum_probs=38.5

Q ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCC-C--cEEEEe
Q 010730            4 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHL-G--QIKIGD   66 (502)
Q Consensus         4 gGsL~~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~-g--~vKL~D   66 (502)
                      +-||.+|+++ +.+++ .++..+.++   .+||-.++  |+.+||+|.||++.... +  .+.|+|
T Consensus       107 s~TL~~~l~~-~~~~~-~~~~~L~~f---~~~l~~~~--Iv~~dl~~~NIv~~~~~~~~~~lvlID  165 (199)
T PF10707_consen  107 SPTLEDYLKE-GGLTE-ELRQALDEF---KRYLLDHH--IVIRDLNPHNIVVQRRDSGEFRLVLID  165 (199)
T ss_pred             CccHHHHHHc-CCccH-HHHHHHHHH---HHHHHHcC--CeecCCCcccEEEEecCCCceEEEEEe
Confidence            4589999955 44666 444444444   45666667  99999999999996432 2  467777


No 472
>PLN02236 choline kinase
Probab=84.55  E-value=1.4  Score=46.15  Aligned_cols=30  Identities=30%  Similarity=0.405  Sum_probs=25.8

Q ss_pred             CeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730           42 PVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus        42 ~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      .++|+|+++.||+++...+.+.++||..+.
T Consensus       201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        201 GFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             eEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            489999999999998644679999998774


No 473
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=84.44  E-value=0.85  Score=44.50  Aligned_cols=31  Identities=32%  Similarity=0.223  Sum_probs=25.8

Q ss_pred             CCCeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730           40 DPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus        40 g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      .+.++|+|+.|.|||+++. +.+.|+||+.+.
T Consensus       162 ~~~l~HgD~~~~Nil~~~~-~~~~iIDwe~a~  192 (244)
T cd05150         162 DLVVTHGDACLPNIIVDPG-KFSGFIDLGRLG  192 (244)
T ss_pred             ceEEECCCCCCccEEEeCC-cEEEEEEccccc
Confidence            3459999999999999875 567899999764


No 474
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=83.50  E-value=1.7  Score=43.62  Aligned_cols=29  Identities=34%  Similarity=0.440  Sum_probs=24.7

Q ss_pred             CeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730           42 PVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus        42 ~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      +++|+|+.|.||+++++ +.+.|+||+.+.
T Consensus       176 ~l~HgD~~~~Nil~~~~-~~~~iIDfe~a~  204 (296)
T cd05153         176 GVIHADLFRDNVLFDGD-ELSGVIDFYFAC  204 (296)
T ss_pred             cCCccCcCcccEEEeCC-ceEEEeehhhhc
Confidence            49999999999999875 456899999764


No 475
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=83.09  E-value=1.9  Score=43.77  Aligned_cols=54  Identities=19%  Similarity=0.260  Sum_probs=40.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730           17 VDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus        17 L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      .+...++..+..+-.++.-++....-++|.|+.|+|++.++. +.++|+||.-|.
T Consensus       129 ~~~~~~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~-~~l~LIDWEyAg  182 (269)
T COG0510         129 RDNHLLRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDK-GGLFLIDWEYAG  182 (269)
T ss_pred             hhhHHHHHHHHHHHHHhhhcCCCceeeecCCCCccceEEcCC-CcEEEEecccCC
Confidence            344455666666766776666541238999999999999985 689999998774


No 476
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=82.97  E-value=2.9  Score=42.47  Aligned_cols=52  Identities=21%  Similarity=0.289  Sum_probs=41.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHh-CCCCeEecCCCCCcEEEeCCCCcEEEEecCCceecc
Q 010730           19 IRAVKNWARQILRGIAYLHG-HDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR   74 (502)
Q Consensus        19 e~~i~~i~~QIL~gL~YLHs-~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~   74 (502)
                      .+.+..+..+++..+.-|-. .+  +||+||..=|||+..  +.+.|||||-|....
T Consensus       165 ~~e~~~~~~~~v~~~~~l~~~a~--LVHgDLSEyNiL~~~--~~p~iID~~QaV~~~  217 (268)
T COG1718         165 LEEAEGLYEDVVEYMRRLYKEAG--LVHGDLSEYNILVHD--GEPYIIDVSQAVTID  217 (268)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcC--cccccchhhheEEEC--CeEEEEECccccccC
Confidence            33677778888888877665 45  999999999999983  689999999886544


No 477
>PF01633 Choline_kinase:  Choline/ethanolamine kinase;  InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome.  Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=82.56  E-value=1  Score=43.23  Aligned_cols=30  Identities=33%  Similarity=0.517  Sum_probs=19.5

Q ss_pred             eEecCCCCCcEEEeCCCCcEEEEecCCcee
Q 010730           43 VIHRDLKCDNIFVNGHLGQIKIGDLGLAAI   72 (502)
Q Consensus        43 IIHRDLKPeNILl~~~~g~vKL~DFGlA~~   72 (502)
                      +.|.||.|.||+++...+.++|+||..|..
T Consensus       145 ~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  145 FCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             EeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            779999999999943447999999998854


No 478
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=81.76  E-value=3.6  Score=44.19  Aligned_cols=52  Identities=21%  Similarity=0.362  Sum_probs=41.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCcee
Q 010730           18 DIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI   72 (502)
Q Consensus        18 ~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~   72 (502)
                      ..+++..++.+-+..|.-+.. +.+.-||+|...|||++ + |.|.|+||-+++.
T Consensus       319 ~~~e~lsff~s~~sil~~lek-kf~fehrnlt~~niLId-~-GnvtLIDfklsRl  370 (488)
T COG5072         319 RSEEELSFFWSCISILDILEK-KFPFEHRNLTLDNILID-E-GNVTLIDFKLSRL  370 (488)
T ss_pred             cHHHHHHHHHHHHHHHhhhhh-cCCcccccccccceeee-c-CceEEEEeeeeec
Confidence            456777777777766655554 45689999999999999 4 8999999999984


No 479
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=81.43  E-value=1.2  Score=43.89  Aligned_cols=29  Identities=28%  Similarity=0.397  Sum_probs=24.8

Q ss_pred             CeEecCCCCCcEEEeCCCCcEEEEecCCcee
Q 010730           42 PVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI   72 (502)
Q Consensus        42 ~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~   72 (502)
                      .++|+|+.|.||+++++ + +.|+||..+..
T Consensus       147 ~l~H~Dl~~~Nil~~~~-~-~~lIDwE~a~~  175 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQ-G-LKLIDWEYASD  175 (256)
T ss_pred             eeecCCCCcCcEEEeCC-C-CEEEeccccCc
Confidence            48999999999999875 3 89999998743


No 480
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=81.08  E-value=3.3  Score=39.57  Aligned_cols=31  Identities=26%  Similarity=0.331  Sum_probs=24.9

Q ss_pred             CeEecCCCCCcEEEeCCC-C---cEEEEecCCcee
Q 010730           42 PVIHRDLKCDNIFVNGHL-G---QIKIGDLGLAAI   72 (502)
Q Consensus        42 ~IIHRDLKPeNILl~~~~-g---~vKL~DFGlA~~   72 (502)
                      .++|+|+.+.||++..+. |   .+.++||..+..
T Consensus       121 vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~  155 (196)
T smart00587      121 VLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHY  155 (196)
T ss_pred             EEeeCCCCccceeeccCCCCCccceEEEecccCCc
Confidence            489999999999997542 2   589999998743


No 481
>PRK10271 thiK thiamine kinase; Provisional
Probab=80.25  E-value=1.7  Score=42.06  Aligned_cols=29  Identities=21%  Similarity=0.368  Sum_probs=24.6

Q ss_pred             CeEecCCCCCcEEEeCCCCcEEEEecCCcee
Q 010730           42 PVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI   72 (502)
Q Consensus        42 ~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~   72 (502)
                      ..+|+|+.|.||+++++ + ++++||+.+..
T Consensus        78 ~p~H~D~~~~N~~~~~~-~-~~lIDwe~a~~  106 (188)
T PRK10271         78 APLHMDVHAGNLVHSAS-G-LRLIDWEYAGD  106 (188)
T ss_pred             eeecCCCCCccEEEECC-C-EEEEeCCcccC
Confidence            36899999999999875 4 99999998754


No 482
>PF07387 Seadorna_VP7:  Seadornavirus VP7;  InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=79.16  E-value=1.9  Score=43.44  Aligned_cols=38  Identities=24%  Similarity=0.421  Sum_probs=32.7

Q ss_pred             HHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecC
Q 010730           30 LRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLG   68 (502)
Q Consensus        30 L~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFG   68 (502)
                      +..|.-.|+..++.+|+|-.|+||+-+.. |.+||.|=+
T Consensus       151 i~~L~~fH~~~~~~lHGD~np~NiM~D~~-G~lKlVDP~  188 (308)
T PF07387_consen  151 IKDLMDFHSENQHCLHGDCNPDNIMCDKF-GYLKLVDPV  188 (308)
T ss_pred             HHHHHHhhccCCCeecCCCChhheeecCC-CCEEecChh
Confidence            46688889777789999999999999886 899999855


No 483
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported 
Probab=77.95  E-value=1.9  Score=43.74  Aligned_cols=31  Identities=19%  Similarity=0.328  Sum_probs=25.0

Q ss_pred             CCeEecCCCCCcEEEeCCCCc-EEEEecCCcee
Q 010730           41 PPVIHRDLKCDNIFVNGHLGQ-IKIGDLGLAAI   72 (502)
Q Consensus        41 ~~IIHRDLKPeNILl~~~~g~-vKL~DFGlA~~   72 (502)
                      +.++|+|+.|.|||++++ +. .-|+||+.+..
T Consensus       185 ~~lvHGD~~~~Nilv~~~-~~~~gviDWe~a~i  216 (276)
T cd05152         185 TVLVHGDLHPGHILIDED-ARVTGLIDWTEAKV  216 (276)
T ss_pred             CeeEeCCCCCCcEEEeCC-CCEEEEECcHhccc
Confidence            358999999999999874 44 46999998743


No 484
>PRK06148 hypothetical protein; Provisional
Probab=77.12  E-value=5.1  Score=48.16  Aligned_cols=32  Identities=34%  Similarity=0.388  Sum_probs=25.3

Q ss_pred             CCeEecCCCCCcEEEeCCC-CcEE-EEecCCcee
Q 010730           41 PPVIHRDLKCDNIFVNGHL-GQIK-IGDLGLAAI   72 (502)
Q Consensus        41 ~~IIHRDLKPeNILl~~~~-g~vK-L~DFGlA~~   72 (502)
                      ..+||.|+.+.|||++++. +.+. |+|||-+..
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            3499999999999998762 1555 999998743


No 485
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=76.55  E-value=4.4  Score=41.37  Aligned_cols=29  Identities=10%  Similarity=0.101  Sum_probs=25.6

Q ss_pred             CeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730           42 PVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus        42 ~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      +++|+|+.+.|++++++ +.+.++||..+.
T Consensus       197 ~lcHgD~~~~Nvl~~~~-~~~~iIDfd~~~  225 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDET-RGGYFINFEKAS  225 (309)
T ss_pred             eeeCCCCcHHhEEEcCC-CCEEEEEhhhcc
Confidence            59999999999999876 679999998774


No 486
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=74.89  E-value=5.6  Score=41.29  Aligned_cols=29  Identities=24%  Similarity=0.413  Sum_probs=25.1

Q ss_pred             eEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730           43 VIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus        43 IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      +.|.||.+.||+++.+.+.++++||..|.
T Consensus       184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag  212 (330)
T PLN02421        184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGS  212 (330)
T ss_pred             EEECCCCcccEEEeCCCCcEEEEcccccC
Confidence            67999999999997654689999999874


No 487
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=74.61  E-value=1.8  Score=48.20  Aligned_cols=81  Identities=16%  Similarity=0.118  Sum_probs=53.4

Q ss_pred             CCcccchhHHHHHHHHhhccCCCCCCCChHHHHHHhhcCCCCC---------cccccccHHHHHHHHHhhh-CcCCCCCH
Q 010730           99 NELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPG---------AFHRIQDAEARRFVGKCLE-NVSKRLPA  168 (502)
Q Consensus        99 s~~~DIWSLGviLyeLLTG~~Pf~~~~~~~ql~~kI~~g~~p~---------~~~~~~s~~l~~LI~kcL~-dP~kRpSa  168 (502)
                      ++++|||++|.++.++.-|..-+....+..++......+..+.         .+....+.....+..+|+- .|..||..
T Consensus       109 ~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~  188 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLP  188 (725)
T ss_pred             CcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccch
Confidence            3689999999999999998877655433333322222222221         1122235566777888887 89999998


Q ss_pred             HHHhcCCCCcC
Q 010730          169 KELLLDPFLAS  179 (502)
Q Consensus       169 ~ELL~hPff~~  179 (502)
                      .++++++-|..
T Consensus       189 ~~~~k~~i~~e  199 (725)
T KOG1093|consen  189 MELSKRCSFTE  199 (725)
T ss_pred             hHHhcCccHHH
Confidence            88888887753


No 488
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=72.29  E-value=3.3  Score=43.47  Aligned_cols=28  Identities=29%  Similarity=0.368  Sum_probs=24.2

Q ss_pred             eEecCCCCCcEEEeCCCCcEEEEecCCc
Q 010730           43 VIHRDLKCDNIFVNGHLGQIKIGDLGLA   70 (502)
Q Consensus        43 IIHRDLKPeNILl~~~~g~vKL~DFGlA   70 (502)
                      |||.|+.|.||++++....+.++||+-+
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa  226 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDA  226 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEcccc
Confidence            8999999999999986324889999976


No 489
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=71.84  E-value=10  Score=42.44  Aligned_cols=62  Identities=19%  Similarity=0.162  Sum_probs=40.5

Q ss_pred             HHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeC---CCCcEEEEecCCceeccC
Q 010730            9 EYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNG---HLGQIKIGDLGLAAILRG   75 (502)
Q Consensus         9 ~yi~k~~~L~e~~i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~---~~g~vKL~DFGlA~~~~~   75 (502)
                      +++.+.+ ++...+..-+.++..-.-+  .+|  ++|.|=.|.||++..   ..+.+.+.|||+...+..
T Consensus       293 ~~i~~~g-i~~~~i~~~l~~~~~~qIf--~~G--ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  293 DAIDKRG-ISPHDILNKLVEAYLEQIF--KTG--FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             HHHHHcC-CCHHHHHHHHHHHHHHHHH--hcC--CccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            4555544 5555554444443322222  246  999999999999983   347899999999876643


No 490
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=70.88  E-value=4.1  Score=42.65  Aligned_cols=32  Identities=19%  Similarity=0.278  Sum_probs=27.6

Q ss_pred             CeEecCCCCCcEEEeCCCCcEEEEecCCceecc
Q 010730           42 PVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR   74 (502)
Q Consensus        42 ~IIHRDLKPeNILl~~~~g~vKL~DFGlA~~~~   74 (502)
                      .++|+|+.+.||+++.. +.+-++||+++..-.
T Consensus       199 ~lvHGD~~~gNlii~~~-~~~gVlDwe~~~lGD  230 (321)
T COG3173         199 VLVHGDYRPGNLIIDPG-RPTGVLDWELATLGD  230 (321)
T ss_pred             eeeeCCcccCCEEEeCC-CeeEEEeccccccCC
Confidence            69999999999999987 469999999986543


No 491
>PRK11768 serine/threonine protein kinase; Provisional
Probab=70.03  E-value=11  Score=38.94  Aligned_cols=28  Identities=25%  Similarity=0.135  Sum_probs=23.1

Q ss_pred             CCeEecCCCCCcEEEeCCCCcEEEEecCCce
Q 010730           41 PPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA   71 (502)
Q Consensus        41 ~~IIHRDLKPeNILl~~~~g~vKL~DFGlA~   71 (502)
                      .++||+|+.+.|||++ +  .+.|+||+-+.
T Consensus       196 ~~liHgD~h~~NvL~~-d--~~~iIDFDd~~  223 (325)
T PRK11768        196 LLRLHGDCHPGNILWR-D--GPHFVDLDDAR  223 (325)
T ss_pred             ccceecCCCchhcccc-C--CcEEEeCCCCC
Confidence            3589999999999994 3  47899999763


No 492
>PF05445 Pox_ser-thr_kin:  Poxvirus serine/threonine protein kinase;  InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=68.06  E-value=11  Score=40.25  Aligned_cols=36  Identities=33%  Similarity=0.450  Sum_probs=24.5

Q ss_pred             HHHHHHHHHHHHHHHHHHH------hCCCCeEecCCCCCcEEEeCC
Q 010730           19 IRAVKNWARQILRGIAYLH------GHDPPVIHRDLKCDNIFVNGH   58 (502)
Q Consensus        19 e~~i~~i~~QIL~gL~YLH------s~g~~IIHRDLKPeNILl~~~   58 (502)
                      .+-++.++.||  +|-|+-      ..+  .+|-||||+|||+-+.
T Consensus       274 ~~YvkfifLQi--aLLyikIYelp~c~n--F~H~DLKPdNILiFds  315 (434)
T PF05445_consen  274 VEYVKFIFLQI--ALLYIKIYELPCCTN--FLHVDLKPDNILIFDS  315 (434)
T ss_pred             HHHHHHHHHHH--HHHHeeeecCCCcce--eeecccCcCcEEEecC
Confidence            34566777777  445522      224  8999999999998543


No 493
>PRK06149 hypothetical protein; Provisional
Probab=67.17  E-value=6.5  Score=47.03  Aligned_cols=30  Identities=23%  Similarity=0.320  Sum_probs=24.1

Q ss_pred             CeEecCCCCCcEEEeCCC-Cc---EEEEecCCce
Q 010730           42 PVIHRDLKCDNIFVNGHL-GQ---IKIGDLGLAA   71 (502)
Q Consensus        42 ~IIHRDLKPeNILl~~~~-g~---vKL~DFGlA~   71 (502)
                      ++||.|+.+.||+++++. +.   .-|+|||-+.
T Consensus       209 g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~  242 (972)
T PRK06149        209 QAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLV  242 (972)
T ss_pred             cccCCCCCcccEEEcCCCCCCcceeEEEEcccch
Confidence            499999999999998642 22   3799999774


No 494
>PHA03111 Ser/Thr kinase; Provisional
Probab=65.13  E-value=12  Score=39.73  Aligned_cols=38  Identities=26%  Similarity=0.242  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHHHHHHHHH-H---hCCCCeEecCCCCCcEEEeCC
Q 010730           19 IRAVKNWARQILRGIAYL-H---GHDPPVIHRDLKCDNIFVNGH   58 (502)
Q Consensus        19 e~~i~~i~~QIL~gL~YL-H---s~g~~IIHRDLKPeNILl~~~   58 (502)
                      .+-++.++.||+.-.-.+ .   ..+  .+|-||||+|||+-+.
T Consensus       278 ~~YikfifLQiaLLyikIYelp~c~n--F~H~DLKPdNILiFds  319 (444)
T PHA03111        278 VEYIKFIFLQIALLYIKIYELPCCDN--FLHVDLKPDNILIFDS  319 (444)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcce--eeeccCCCCcEEEecC
Confidence            345677888885433222 1   124  8999999999998554


No 495
>PF02958 EcKinase:  Ecdysteroid kinase;  InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=65.06  E-value=8.7  Score=38.53  Aligned_cols=51  Identities=18%  Similarity=0.189  Sum_probs=32.4

Q ss_pred             HHHHHHHHHHHHHHHH----hCCCCeEecCCCCCcEEEeCCC-C---cEEEEecCCcee
Q 010730           22 VKNWARQILRGIAYLH----GHDPPVIHRDLKCDNIFVNGHL-G---QIKIGDLGLAAI   72 (502)
Q Consensus        22 i~~i~~QIL~gL~YLH----s~g~~IIHRDLKPeNILl~~~~-g---~vKL~DFGlA~~   72 (502)
                      +..+...++..+..+.    ..-.-++|+|++..|||+..+. |   .++++||-++..
T Consensus       192 l~~~~~~~~~~~~~~~~~~~~~~~vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~  250 (294)
T PF02958_consen  192 LEALLDKFFERMQELVDPSKEPFNVLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARY  250 (294)
T ss_pred             HHHHHHHHHHHHHHHhccccCCceEEEcCccCHHhEeEccccccccccceeeccccccC
Confidence            3344444444444444    1112489999999999996542 2   689999987643


No 496
>PF13095 FTA2:  Kinetochore Sim4 complex subunit FTA2
Probab=63.56  E-value=9.7  Score=37.45  Aligned_cols=41  Identities=27%  Similarity=0.258  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCc
Q 010730           22 VKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLA   70 (502)
Q Consensus        22 i~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA   70 (502)
                      ...-+.+|++-|..+|..|  |+-+|+|+.|..   +   -||+|||.+
T Consensus       166 ~~~~~~~~~~dl~~~~k~g--I~~~Dv~~~ny~---~---G~lvDfs~~  206 (207)
T PF13095_consen  166 QIRDIPQMLRDLKILHKLG--IVPRDVKPRNYR---G---GKLVDFSSS  206 (207)
T ss_pred             chhHHHHHHHHHHHHHHCC--eeeccCcccccc---C---CEEEecccC
Confidence            4455889999999999998  999999999976   1   389999864


No 497
>PLN02876 acyl-CoA dehydrogenase
Probab=62.90  E-value=11  Score=44.09  Aligned_cols=32  Identities=25%  Similarity=0.390  Sum_probs=25.4

Q ss_pred             CeEecCCCCCcEEEeCCCCc-EEEEecCCceec
Q 010730           42 PVIHRDLKCDNIFVNGHLGQ-IKIGDLGLAAIL   73 (502)
Q Consensus        42 ~IIHRDLKPeNILl~~~~g~-vKL~DFGlA~~~   73 (502)
                      .+||+|+++.||+++...+. +-|+|+.++..-
T Consensus       226 ~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G  258 (822)
T PLN02876        226 GIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG  258 (822)
T ss_pred             ceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence            49999999999999854334 579999988653


No 498
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=61.36  E-value=15  Score=39.11  Aligned_cols=45  Identities=24%  Similarity=0.298  Sum_probs=35.6

Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEecCCCCCcEEEeCCCCcEEEEecCCc
Q 010730           23 KNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLA   70 (502)
Q Consensus        23 ~~i~~QIL~gL~YLHs~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA   70 (502)
                      ..+...++.-+.-|..+|  +||+|..-=||++..+ +.+++|||--.
T Consensus       205 ~~ly~~lm~~Iv~la~~G--lIHgDFNEFNimv~dd-~~i~vIDFPQm  249 (465)
T KOG2268|consen  205 PTLYDDLMGLIVRLANHG--LIHGDFNEFNIMVKDD-DKIVVIDFPQM  249 (465)
T ss_pred             HHHHHHHHHHHHHHHHcC--ceecccchheeEEecC-CCEEEeechHh
Confidence            344555555666778888  9999999999999976 68999999654


No 499
>PRK10593 hypothetical protein; Provisional
Probab=61.24  E-value=10  Score=38.78  Aligned_cols=29  Identities=10%  Similarity=0.258  Sum_probs=21.9

Q ss_pred             CCCeEecCCCCCcEEEeCCCCc-EEEEecC
Q 010730           40 DPPVIHRDLKCDNIFVNGHLGQ-IKIGDLG   68 (502)
Q Consensus        40 g~~IIHRDLKPeNILl~~~~g~-vKL~DFG   68 (502)
                      .+.++|+|+.+.||+++...+. +.|+|..
T Consensus       192 ~psLlHGDlw~gNvl~~~~~~~i~~liDPa  221 (297)
T PRK10593        192 NCVLVHGNFTLRSMLKDPRSDQLLAMLNPG  221 (297)
T ss_pred             CCeeEeCCCCcccEEECCCCCceEEEECch
Confidence            4679999999999999864233 5677654


No 500
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=60.10  E-value=15  Score=39.57  Aligned_cols=30  Identities=30%  Similarity=0.478  Sum_probs=25.1

Q ss_pred             CCCCeEecCCCCCcEEEeCCCCcEEEEecCCc
Q 010730           39 HDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLA   70 (502)
Q Consensus        39 ~g~~IIHRDLKPeNILl~~~~g~vKL~DFGlA   70 (502)
                      ++..++|+|+.+.||++..+  .++++|+-++
T Consensus       221 ~~~~l~HgDl~~gni~~~~~--~~~viD~E~a  250 (401)
T PRK09550        221 KAEALLHGDLHTGSIFVTEE--ETKVIDPEFA  250 (401)
T ss_pred             CCCceeeccCCcccEEeeCC--CcEEEecccc
Confidence            34459999999999999765  5999999865


Done!