BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010731
(502 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L7W1|MSL3_ARATH Mechanosensitive ion channel protein 3, chloroplastic
OS=Arabidopsis thaliana GN=MSL3 PE=2 SV=1
Length = 678
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/461 (68%), Positives = 385/461 (83%), Gaps = 7/461 (1%)
Query: 2 RRDAWGLNLLSHLCGPLNPISTKCNVFICRSVLAPG-GIDIPVLKSAAAAVLTRSYDTLR 60
R+D W L LL L G + P+S++CN F+CRS L+PG G + P+LKS A + TR YD L
Sbjct: 48 RQDVWSLQLLESLSGSIVPVSSRCNAFVCRSALSPGNGNEGPILKSTAV-IFTRVYDALG 106
Query: 61 GNPVILRLIPAAALVAFAAWGLVPLVRLGRT-IFLNRTDGSWKRSRTHYILTSYLQPLLL 119
GNP +++LIPA ++AFA WGL PL+RL RT +F D + ++S T YI+ SYLQPLLL
Sbjct: 107 GNPHLVKLIPAVGILAFATWGLRPLLRLARTTLFEKGNDANSQKSSTQYIVVSYLQPLLL 166
Query: 120 WTGVTLICRELDPLVLPSETSQGVKQRVLNFVRSLSTVLAFAYCLSSLIQQIQKFLTEAN 179
W+G L+CR LDP+VLPS Q +KQR+L F RS+STVLAF+ CLSSL+QQ+QKF E N
Sbjct: 167 WSGAILLCRTLDPIVLPSSAGQAIKQRLLIFARSISTVLAFSCCLSSLLQQVQKFFMETN 226
Query: 180 DADSTDARNMGFNFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREI 239
+ D RNMGF+FAGKAVYTA WVAA SLFMELLGFSTQ+WLTAGGLGTVLLTLAGREI
Sbjct: 227 NP--ADTRNMGFSFAGKAVYTAAWVAAASLFMELLGFSTQKWLTAGGLGTVLLTLAGREI 284
Query: 240 FTNFLSSVMIHATQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHK 299
TNFLSS+MIHAT+PFV+NEWIQTKI GYEVSGTVE VGWWSPTIIRGDDREAVHIPNH+
Sbjct: 285 LTNFLSSIMIHATRPFVLNEWIQTKIGGYEVSGTVEQVGWWSPTIIRGDDREAVHIPNHQ 344
Query: 300 FTVNVVRNLSQKTHWRIKTYLAISHLDVHKVNSIVADMRKVLAKNPQVEQQRLHRRVFLE 359
F+VN+VRNL+QKTHWRIKT+LAISHLDV K+N+IVADMRKVL+KNPQ+EQQ++HRRVFLE
Sbjct: 345 FSVNIVRNLTQKTHWRIKTHLAISHLDVSKINNIVADMRKVLSKNPQIEQQKIHRRVFLE 404
Query: 360 NINPESQSLNILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHRARMATPIRTVQKIYSE 419
+I+PE+Q+L IL+SCFVKTSRFEEYLCVKEA+LLDLL VI HH AR+ATPIRTVQ++ +E
Sbjct: 405 DIDPENQALRILISCFVKTSRFEEYLCVKEAVLLDLLTVIRHHGARLATPIRTVQRMRNE 464
Query: 420 PDLENIPFADTIFTHSRAAANRPFLLIEPSYKISSDDKIKA 460
+++ F+D +F ++AA NR ++LIEPSYKI+SDD K+
Sbjct: 465 AEVDTAGFSDIVF--NQAAMNRRYMLIEPSYKINSDDNSKS 503
>sp|Q56X46|MSL2_ARATH Mechanosensitive ion channel protein 2, chloroplastic
OS=Arabidopsis thaliana GN=MSL2 PE=2 SV=1
Length = 673
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/457 (67%), Positives = 376/457 (82%), Gaps = 5/457 (1%)
Query: 10 LLSHLCGPLNPISTKCNVFICRSVLAPGGIDIPVLKSAAAAVLTRSYDTLRGNPVILRLI 69
L ++L P+ + + F C S A G P +K A VLT+S+ ++ P + +L+
Sbjct: 56 LSNYLRRPICSVPCRTTAFRCHSFSASGKAIEPAVK-AVTVVLTKSHGLMQQFPFVYKLV 114
Query: 70 PAAALVAFAAWGLVPLVRLGRTIFLNRTDGSWKRSRTHYILTSYLQPLLLWTGVTLICRE 129
PA AL+ F+ WGLVP R GR I LN+ D WK+S T++++TSY+QPLLLW G ICR
Sbjct: 115 PAVALLVFSLWGLVPFARQGRNILLNKNDNGWKKSGTYHVMTSYVQPLLLWLGALFICRA 174
Query: 130 LDPLVLPSETSQGVKQRVLNFVRSLSTVLAFAYCLSSLIQQIQKFLTEANDADSTDARNM 189
LDP+VLP+E S+ VK R+LNFVRSLSTVLAFAYCLSSLIQQ QK +E ++ +D RNM
Sbjct: 175 LDPVVLPTEASKIVKDRLLNFVRSLSTVLAFAYCLSSLIQQTQKLFSET--SNPSDTRNM 232
Query: 190 GFNFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMI 249
GF FAGKA+Y+AVWVAAVSLFMELLGFSTQ+WLTAGGLGTVL+TLAGREI TNFLSSVMI
Sbjct: 233 GFQFAGKALYSAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLITLAGREILTNFLSSVMI 292
Query: 250 HATQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLS 309
HAT+PFV+NEWIQTKI+GYEVSGTVEHVGWWSPTIIRG+DREA+HIPNHKFTVNVVRNL+
Sbjct: 293 HATRPFVLNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAIHIPNHKFTVNVVRNLT 352
Query: 310 QKTHWRIKTYLAISHLDVHKVNSIVADMRKVLAKNPQVEQQRLHRRVFLENINPESQSLN 369
QKTHWRIKT+LAISHLDV+K+N+IVADMRKVLAKNP VEQQRLHRRVFLEN+ PE+Q+L+
Sbjct: 353 QKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPMVEQQRLHRRVFLENVIPENQALS 412
Query: 370 ILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHRARMATPIRTVQKIYSEPDLENIPFAD 429
IL+SCFVKTS EEYL VKEAILLDLL VISHHRAR+ATPIRT++K+Y+E D+EN PF +
Sbjct: 413 ILISCFVKTSHHEEYLGVKEAILLDLLRVISHHRARLATPIRTIRKMYTETDVENTPFGE 472
Query: 430 TIFTHSRAAANRPFLLIEPSYKISSDDKIKASTRAAR 466
+++ + RP +LIEP+YKI+ +DK K+ RAA+
Sbjct: 473 SMY--GGVTSRRPLMLIEPAYKINGEDKSKSQNRAAK 507
>sp|P0AEB5|YNAI_ECOLI MscS family inner membrane protein YnaI OS=Escherichia coli (strain
K12) GN=ynaI PE=1 SV=1
Length = 343
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 130/246 (52%), Gaps = 19/246 (7%)
Query: 169 QQIQKFLTEANDADSTDARNMGFNFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLG 228
QQI+K D T AR M + + + V V L+ E G S LT GG+G
Sbjct: 104 QQIKK------GRDITSARIMS-----RIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIG 152
Query: 229 TVLLTLAGREIFTNFLSSVMIHATQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGD 288
+ + +AG++I +NF S +M++ +PF I +WI++ + E GTV +GW I D
Sbjct: 153 GLAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIE--GTVAEIGWRITKITTFD 210
Query: 289 DREAVHIPNHKFTVNVVRNLSQKTHWRIKTYLAISHLDVHKVNSIVADMRKVLAKNPQVE 348
+R +++PN F+ V N + T+ RI T + + + D KV IV +R++L +P ++
Sbjct: 211 NR-PLYVPNSLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAID 269
Query: 349 QQRLHRRVFLENINP-ESQSLNILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHRARMA 407
Q R+ L N SLNI+V CF KT+ + E+L ++ + L ++ ++ H A A
Sbjct: 270 Q----RQTLLVYFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFA 325
Query: 408 TPIRTV 413
P +T+
Sbjct: 326 FPSQTL 331
>sp|P0AEB6|YNAI_ECO57 MscS family inner membrane protein YnaI OS=Escherichia coli O157:H7
GN=ynaI PE=3 SV=1
Length = 343
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 130/246 (52%), Gaps = 19/246 (7%)
Query: 169 QQIQKFLTEANDADSTDARNMGFNFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLG 228
QQI+K D T AR M + + + V V L+ E G S LT GG+G
Sbjct: 104 QQIKK------GRDITSARIMS-----RIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIG 152
Query: 229 TVLLTLAGREIFTNFLSSVMIHATQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGD 288
+ + +AG++I +NF S +M++ +PF I +WI++ + E GTV +GW I D
Sbjct: 153 GLAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIE--GTVAEIGWRITKITTFD 210
Query: 289 DREAVHIPNHKFTVNVVRNLSQKTHWRIKTYLAISHLDVHKVNSIVADMRKVLAKNPQVE 348
+R +++PN F+ V N + T+ RI T + + + D KV IV +R++L +P ++
Sbjct: 211 NR-PLYVPNSLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAID 269
Query: 349 QQRLHRRVFLENINP-ESQSLNILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHRARMA 407
Q R+ L N SLNI+V CF KT+ + E+L ++ + L ++ ++ H A A
Sbjct: 270 Q----RQTLLVYFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFA 325
Query: 408 TPIRTV 413
P +T+
Sbjct: 326 FPSQTL 331
>sp|O66994|Y812_AQUAE Uncharacterized MscS family protein aq_812 OS=Aquifex aeolicus
(strain VF5) GN=aq_812 PE=3 SV=1
Length = 368
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 124/246 (50%), Gaps = 12/246 (4%)
Query: 169 QQIQKFLTEANDADSTDARNMGFNFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLG 228
+I +F + D A +G +F K + V V + ++ G + L + GL
Sbjct: 126 NKIVEFFVKVGGKDF--AEEVG-DFILKILKAFVVVIVGASLLQEWGVNIGAILASVGLL 182
Query: 229 TVLLTLAGREIFTNFLSSVMIHATQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGD 288
+ ++LA ++ F N LS ++I +P + E ++ K + G+VE +G S T IR
Sbjct: 183 GLAVSLAAKDTFENILSGLIILLDKPVKVGETVKVK----DFMGSVEDIGLRS-TKIRTF 237
Query: 289 DREAVHIPNHKFTVNVVRNLSQKTHWRIKTYLAISH-LDVHKVNSIVADMRKVLAKNPQV 347
D+ V IPN N V N +++ R++ Y+ + + ++ +I+ ++R++L ++P V
Sbjct: 238 DKSLVTIPNRDIVNNHVENFTRRNKRRVRFYIGVVYSTKREQLENILKEIRELLKEHPGV 297
Query: 348 EQQRLHRRVFLENINPESQSLNILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHRARMA 407
+ V+ EN SLNIL+ + T+ +EEYL + E I L ++ ++ + + A
Sbjct: 298 AKDE-KFYVYFENYG--DSSLNILIQYYANTNDYEEYLKIIEDINLKIMEIVEKNGSSFA 354
Query: 408 TPIRTV 413
P R+V
Sbjct: 355 FPSRSV 360
>sp|Q9ZKG7|Y415_HELPJ Uncharacterized MscS family protein jhp_0969 OS=Helicobacter pylori
(strain J99) GN=jhp_0969 PE=3 SV=1
Length = 623
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 36/256 (14%)
Query: 192 NFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIHA 251
N K VY +++ A+ ++ LGF+ + + G+G + + LA +++ NF +SV++
Sbjct: 363 NLILKVVYFLIFIVALLGVLKQLGFNVSAIIASLGIGGLAVALAVKDVLANFFASVILLL 422
Query: 252 TQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLS-Q 310
F +WI + G EV GTV +G T IR D + +PN + +RN S +
Sbjct: 423 DNSFSQGDWI---VCG-EVEGTVVEMG-LRRTTIRAFDNALLSVPNSELAGKPIRNWSRR 477
Query: 311 KTHWRIKTYLAISHLDVHKVNSI-VADMRKVLAKNPQV--------EQQRLHRRVFLENI 361
K RIK + +++ + V D++++L +P++ + +R +F ++I
Sbjct: 478 KVGRRIKMEIGLTYSSSQSALQLCVKDIKEMLENHPKIANGADSALQNASDYRYMFKKDI 537
Query: 362 ------------------NPESQSLNILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHR 403
S+NILV CF KT +EE+L VKE ++L ++ ++ H
Sbjct: 538 VSIDDFLGYKNNLFVFLDQFADSSINILVYCFSKTVVWEEWLEVKEDVMLKIMGIVEKHH 597
Query: 404 ARMATPIRTVQKIYSE 419
A P Q +Y E
Sbjct: 598 LSFAFP---SQSLYVE 610
>sp|O25170|Y415_HELPY Uncharacterized MscS family protein HP_0415 OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=HP_0415 PE=3 SV=1
Length = 623
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 36/256 (14%)
Query: 192 NFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIHA 251
N K VY +++ A+ ++ LGF+ + + G+G + + LA +++ NF +SV++
Sbjct: 363 NLILKVVYFLIFIVALLGVLKQLGFNVSAIIASLGIGGLAVALAVKDVLANFFASVILLL 422
Query: 252 TQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLS-Q 310
F +WI + G EV GTV +G T IR D + +PN + +RN S +
Sbjct: 423 DNSFSQGDWI---VCG-EVEGTVVEMG-LRRTTIRAFDNALLSVPNSELAGKPIRNWSRR 477
Query: 311 KTHWRIKTYLAISHLDVHKVNSI-VADMRKVLAKNPQV--------EQQRLHRRVFLENI 361
K RIK + +++ + V D++++L +P++ + +R +F ++I
Sbjct: 478 KVGRRIKMEIGLTYSSSQSALQLCVKDIKEMLENHPKIANGADSALQNVSDYRYMFKKDI 537
Query: 362 ------------------NPESQSLNILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHR 403
S+NILV CF KT +EE+L VKE ++L ++ ++ H
Sbjct: 538 VSIDDFLGYKNNLFVFLDQFADSSINILVYCFSKTVVWEEWLEVKEDVMLKIMGIVEKHH 597
Query: 404 ARMATPIRTVQKIYSE 419
A P Q +Y E
Sbjct: 598 LSFAFP---SQSLYVE 610
>sp|Q58543|MSMJL_METJA Large-conductance mechanosensitive channel MscMJLR
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1143
PE=1 SV=1
Length = 361
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 10/172 (5%)
Query: 214 LGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATQPFVINEWIQTKIQGYEVSGT 273
LG+ + L G+G + + LA + + +N ++ ++I +PF I WI T G SG
Sbjct: 161 LGYDIKTLLAGLGIGGLAVALASQNLVSNLIAGLIILTDKPFKIGNWI-TFSGG---SGI 216
Query: 274 VEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHWRIKTYLAISH-LDVHKVNS 332
VE +G S T IR D + +PN K +++N+ K W++ T + +++ V K+
Sbjct: 217 VEDIGIRS-TKIRATDNSIIVVPNSKLIDEIIQNVPSKNKWKVSTTIGVTYNTPVEKIRK 275
Query: 333 IVADMRKVLAKNPQVEQQRLHRRVFLENINPESQSLNILVSCFVKTSRFEEY 384
++ +L ++P VE + + V+ + SLNI V ++K SR+ Y
Sbjct: 276 AEEIIKNILLEHPNVEDEPI--TVYFKEFG--DWSLNIQVVYYIKNSRYNGY 323
>sp|Q8VZL4|MSL1_ARATH Mechanosensitive ion channel protein 1, mitochondrial
OS=Arabidopsis thaliana GN=MSL1 PE=2 SV=1
Length = 497
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 192 NFAG---KAVYTAVWVAAVSLFM-------ELLGFSTQRWLTAGGLGTVLLTLAGREIFT 241
+F G + V T V++V LF E G + Q LT GG+G V A R+I
Sbjct: 271 SFGGLDREKVLTLDKVSSVGLFAIGLMASAEACGVAVQSILTVGGVGGVATAFAARDILG 330
Query: 242 NFLSSVMIHATQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFT 301
N LS + + ++PF + + I+ V G V +G + +++ ++ V +PN F+
Sbjct: 331 NVLSGLSMQFSRPFSMGD----TIKAGSVEGQVIEMGLTTTSLLNA-EKFPVLVPNSLFS 385
Query: 302 VNVVRNLSQKTHWR-IKTYLAISHLDVHKVNSIVADMRKVLAKNPQVEQQRLHRRVFLEN 360
V+ N S + WR I + + + D+ + I +++++L N +V + +L
Sbjct: 386 SQVIVNKS-RAQWRAIASKIPLQIDDLDMIPQISNEIKEMLRSNTKVFLGKEAPHCYLSR 444
Query: 361 INPESQSLNILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHRARMAT 408
+ E + + C + EE ++ +LL+ + +I H + T
Sbjct: 445 V--EKSFAELTIGCNLIRMGKEELYNTQQEVLLEAVKIIKKHGVSLGT 490
>sp|O07594|YHDY_BACSU Uncharacterized MscS family protein YhdY OS=Bacillus subtilis
(strain 168) GN=yhdY PE=3 SV=1
Length = 371
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 103/223 (46%), Gaps = 12/223 (5%)
Query: 193 FAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIHAT 252
F K + + +VS+ + + ++ GLG + LA ++ +NF ++I
Sbjct: 136 FLSKLLRFVIIALSVSVIAQEFNYDVNGFVAGLGLGGLAFALAAKDTISNFFGGIIIITE 195
Query: 253 QPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKT 312
+PF I +W++T V+G+VE + + S T R V +PN ++ + N ++ T
Sbjct: 196 KPFTIGDWVETS----TVTGSVEDITFRS-TRFRTAQGALVTVPNSTLSMEAITNWTRMT 250
Query: 313 HWRIKTYLAISHLD-VHKVNSIVADMRKVLAKNPQVEQQRLHRRVFLENINPESQS-LNI 370
+I + +S+ + + + +R +L +E + + + + N + + S N+
Sbjct: 251 KRQITFSIHVSYATPIENLERSIHSLRTML-----LEHEGVDNEIIMVNFDTFADSYYNL 305
Query: 371 LVSCFVKTSRFEEYLCVKEAILLDLLHVISHHRARMATPIRTV 413
+ + KT+ + E L ++E I ++ ++ + A P + V
Sbjct: 306 FFNFYTKTTVWAENLNIREDINYKIIEILGAEGVQFAYPGQMV 348
>sp|Q57634|MSMJS_METJA Small-conductance mechanosensitive channel MscMJ
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0170
PE=1 SV=1
Length = 350
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 242 NFLSSVMIHATQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFT 301
NF++ ++I +PF + W+ K++G E G VE +G S T IR D + IPN +
Sbjct: 182 NFIAGILILIDKPFSLGHWV--KVKGAE--GIVEEIGIRS-TRIRTFDYTLITIPNSELL 236
Query: 302 VNVVRNLSQKTHWRIKTYLAISH-LDVHKVNSIVADMRKVLAKNP-QVEQQRLHRRVFLE 359
+ + NL+ + R+ + +++ V K+ +++++ +P + R+H R +
Sbjct: 237 DSAIENLTVRDRRRVLMTIGLTYNTPVEKIKRAKEIIKEIVENHPATLPPYRVHFREY-- 294
Query: 360 NINPESQSLNILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHRARMATPIRTVQKIYSE 419
SLN+ V FV+ F+ YL + I L + MA P TV Y E
Sbjct: 295 ----GDWSLNLRVEYFVRNMGFDYYLNAVDEINLKIKEEFEKEGIEMAFPTYTV---YLE 347
Query: 420 PD 421
D
Sbjct: 348 KD 349
>sp|O28726|Y1546_ARCFU Uncharacterized MscS family protein AF_1546 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1546 PE=3 SV=1
Length = 283
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 196 KAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATQPF 255
K +Y + + A + LG L AGG+ ++L A + + N +S + + + +P
Sbjct: 60 KVIYFGIIIVAFIAVLPALGLDLSGLLVAGGITGIVLGFASQSVVANLVSGIFLISEKPI 119
Query: 256 VINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHK-FTVNV 304
I + Q I G V+G VE V S TIIR D V IPN K FT N+
Sbjct: 120 KIGD--QVNIDG--VAGFVEDVNILS-TIIRTYDGLYVRIPNEKVFTSNI 164
>sp|P42531|Y1270_CORGL Uncharacterized protein Cgl1270/cg1434 OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=Cgl1270 PE=4 SV=2
Length = 491
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 171 IQKFLTEANDADSTDARNMGFNFAGKAVYTAVWVA----AVSLFMELLGFSTQRWLTAGG 226
I++ + A DAD+T + FAG VY A VA AVS M+ GFS
Sbjct: 4 IKRRVESAADADTTKNQ---LAFAGVGVYIAQIVAFFMLAVSA-MQAFGFSLAGAAIPAT 59
Query: 227 LGTVLLTLAGREIFTNFLSSVMIHATQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIR 286
+ + + L + I +FL+ I + F + +W++ + G V GTV + + T IR
Sbjct: 60 IASAAIGLGAQSIVADFLAGFFILTEKQFGVGDWVRFEGNGIVVEGTVIEITMRA-TKIR 118
Query: 287 GDDREAVHIPNH--KFTVNVVRNLSQKTHWRIKTYLAISHLDVHKVNSIVADMRKVLAKN 344
+E V IPN K +N N S R + I L + ++A R A
Sbjct: 119 TIAQETVIIPNSTAKVCINNSNNWS-----RAVVVIPIPMLGSENITDVIA--RSEAATR 171
Query: 345 PQVEQQRLHRRVFLE-NINPESQ 366
+ Q+++ + E +++P ++
Sbjct: 172 RALGQEKIAPEILGELDVHPATE 194
>sp|O52401|MSCS_EDWI9 Small-conductance mechanosensitive channel OS=Edwardsiella ictaluri
(strain 93-146) GN=mscS PE=3 SV=1
Length = 286
Score = 39.7 bits (91), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 214 LGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATQPFVINEWIQTKIQGYEVSGT 273
LG T + G + + LA + +NF + V++ +PF E + V+GT
Sbjct: 89 LGVQTTSVIAVLGAAGLAVGLALQGSLSNFAAGVLLVLFRPFRAGEVVDLG----GVTGT 144
Query: 274 VEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHWRIKTYLAISH-LDVHKVNS 332
V V +S T+ D++ V +PN K + N S++ RI + +++ D+ V
Sbjct: 145 VREVQIFSTTLATADNKVIV-VPNGKIIAGNIINFSREPKRRIDIIVGVAYDADIDVVKR 203
Query: 333 IVADM 337
++ D+
Sbjct: 204 VLGDV 208
>sp|Q57362|Y195A_HAEIN Uncharacterized MscS family protein HI_0195.1 OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=HI_0195.1 PE=1 SV=1
Length = 1111
Score = 39.3 bits (90), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 214 LGFSTQRWLTAG---GLGTVLLTLAGREIFTNFLSSVMIHATQPFVINEWIQTKIQGYEV 270
+ +S +WL A GLG +EIF NF+S +++ +P + + + EV
Sbjct: 907 MSWSKLQWLFAALSVGLG-----FGMQEIFANFVSGIILLFERPIRVGDVVTIN----EV 957
Query: 271 SGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRN 307
SGTV + + T+I D +E + +PN F V N
Sbjct: 958 SGTVAKIRIRAITLIDFDRKEVI-VPNKSFVTGQVTN 993
>sp|Q89AB5|Y402_BUCBP Uncharacterized MscS family protein bbp_402 OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=bbp_402 PE=3
SV=1
Length = 281
Score = 38.9 bits (89), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 12/189 (6%)
Query: 192 NFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIHA 251
NF V + A+ + +G T + G + + LA + +NF + V++
Sbjct: 67 NFLAALVRYIIITFALIASLGCIGVQTTSVIAILGAAGMAIGLALQGSLSNFAAGVLLVI 126
Query: 252 TQPFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQK 311
+PF E++ + ++SGTV ++ + T R D + V IPN K + N S++
Sbjct: 127 LRPFRTGEYVNLE----KISGTVLNIHVFYTT-FRTLDGKIVVIPNGKIISGNIINYSRE 181
Query: 312 THWRIKTYLAISH-LDVHKVNSIVADMRKVLAKNPQVEQQRLHRRVFLENINPESQSLNI 370
R + + +S+ D+ KV I ++ V+ +V + R V L + P SLN
Sbjct: 182 KARRNEFIIGVSYDSDIDKVIKI---LKNVVKNEKRVLKDR-DIIVGLSELAPS--SLNF 235
Query: 371 LVSCFVKTS 379
+V C+ T
Sbjct: 236 IVRCWSHTD 244
>sp|P77338|KEFA_ECOLI Potassium efflux system KefA OS=Escherichia coli (strain K12) GN=kefA
PE=1 SV=1
Length = 1120
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 23/151 (15%)
Query: 199 YTAVWVAAVSLFMEL-LGFSTQRWLTAG---GLGTVLLTLAGREIFTNFLSSVMIHATQP 254
Y + V A+++F L + + +WL A GLG L +EIF NF+S ++I +P
Sbjct: 891 YIIIAVGAMTVFGSLGVSWDKLQWLAAALSVGLGFGL-----QEIFGNFVSGLIILFERP 945
Query: 255 FVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLS-QKTH 313
I + + SGTV + + TI D +E + IPN F + N S T
Sbjct: 946 VRIGDTVTIG----SFSGTVSKIRIRATTITDFDRKEVI-IPNKAFVTERLINWSLTDTT 1000
Query: 314 WRIKTYLAISH-LDVHKVNSIVADMRKVLAK 343
R+ L +++ D+ KV RKVL K
Sbjct: 1001 TRLVIRLGVAYGSDLEKV-------RKVLLK 1024
>sp|Q98LB1|SYV_RHILO Valine--tRNA ligase OS=Rhizobium loti (strain MAFF303099) GN=valS
PE=3 SV=1
Length = 927
Score = 35.8 bits (81), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 41/109 (37%), Gaps = 14/109 (12%)
Query: 191 FNFAGKAVYTAVWVAAVSLFMELLG---FSTQRWLTAGGLGTVLLTLAGREIFTNFLSSV 247
FN A A Y VW ++ELL T A V L EI+
Sbjct: 676 FNEAAGAAYRFVWNLFCDWYLELLKPVFMGTDEAAKAESRACVAFVL--DEIYK------ 727
Query: 248 MIHATQPFVINE-WIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHI 295
++H PF+ E W QT +G E + H W SP DD A I
Sbjct: 728 LLHPMMPFMTEELWAQTAGEGKERESLLCHAAWPSPDF--EDDEAAADI 774
>sp|Q20EZ8|FTSHL_OLTVI ATP-dependent zinc metalloprotease FtsH homolog OS=Oltmannsiellopsis
viridis GN=ftsH PE=3 SV=1
Length = 2292
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 142 GVKQRVLNFVRSLSTVLAFAYCLSSLIQQIQKFLTEANDADSTDARNMGFNFAGKAVYTA 201
GV QR NF SL + Y LS L+Q K LT + T N + +++
Sbjct: 1776 GVSQREGNFTESLFSE-KVTYTLSQLVQTWPKVLTSSKLKQKTPQYNEVL--SSESLNKK 1832
Query: 202 VWVAAVSLFMELLGFSTQR-WLT----AGGLGTVL-LTLAGREI-FTNFLSSVMIHATQP 254
+WV++ + +S Q+ +LT G G+ L ++++ E+ +LSS +AT P
Sbjct: 1833 IWVSSDTTHP----YSVQKQFLTYVSVKKGFGSTLDVSMSLPELTVEKWLSSDSTYATDP 1888
Query: 255 FVINEWIQTKIQGYEVSGTV 274
F +N + GY SG V
Sbjct: 1889 FTLNRF------GYYQSGKV 1902
>sp|P39285|YJEP_ECOLI Uncharacterized MscS family protein YjeP OS=Escherichia coli
(strain K12) GN=yjeP PE=3 SV=3
Length = 1107
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 216 FSTQRWLTAG-GLGTVLLTLAGREIFTNFLSSVMIHATQPFVINEWIQTKIQGYEVSGTV 274
+S +WL A G+G L +EIF NF+S ++I +P I + + + +++G+V
Sbjct: 897 WSKLQWLVAALGVG---LGFGLQEIFANFISGLIILFEKPIRIGDTVTIR----DLTGSV 949
Query: 275 EHVGWWSPTIIRGDDREAVHIPNHKF 300
+ + TI D +E + +PN F
Sbjct: 950 TKINTRATTISDWDRKEII-VPNKAF 974
>sp|Q5NXL5|SYV_AROAE Valine--tRNA ligase OS=Aromatoleum aromaticum (strain EbN1) GN=valS
PE=3 SV=1
Length = 948
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 61/155 (39%), Gaps = 15/155 (9%)
Query: 158 LAFAYCLSSLIQQIQKFLTEANDADSTDARNMGFNFAGKAVYTAVWVAAVSLFMELLGFS 217
L F++ ++ ++Q+ TEA A R+ F+ KAVY VW ++EL
Sbjct: 670 LDFSFADRWIVSKLQR--TEAEVAQHF--RDYRFDLVSKAVYEFVWDEYCDWYVELAKVQ 725
Query: 218 TQRWLTAGGLGTVLLTLAGREIFTNFLSSV--MIHATQPFVINEWIQT--KIQGYEVSGT 273
Q GT A R L +V + H PF+ E QT + G + + +
Sbjct: 726 IQS-------GTEAQQRATRRTLLRVLETVLRLAHPLIPFITEELWQTVAPLAGRKDTDS 778
Query: 274 VEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNL 308
+ + + R D+ I K V RNL
Sbjct: 779 IMLARYPEADLSRLDEASEAKIAELKAIVGTCRNL 813
>sp|P79081|ATS1_SCHPO N-acetyltransferase ats1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ats1 PE=2 SV=1
Length = 168
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 194 AGKAVYT---AVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSVMIH 250
AG A+Y + W + V +++E L Q G G+ LL+ RE S+ I
Sbjct: 67 AGMAIYFLNFSTWTSRVGIYLEDLYVRPQ--FRGKGYGSYLLSYLARE-------SLRIG 117
Query: 251 ATQ-PFVINEWIQTKIQGYEVSGTVEHVGWWSPTIIRGDDREAV 293
+ +V+ +W Q I+ YE +G + VG WS + G++ +A+
Sbjct: 118 GRRLDWVVLDWNQRAIEVYEKAGA-QKVGGWSMMRVTGENLKAL 160
>sp|Q67E00|DUSTY_XENTR Dual serine/threonine and tyrosine protein kinase OS=Xenopus
tropicalis GN=dstyk PE=2 SV=1
Length = 918
Score = 33.5 bits (75), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 18/112 (16%)
Query: 128 RELDPLVLPSETSQGVKQRVLNFVRSLSTVLAFAYCLSSLIQQIQKFLTEAND------- 180
+++D +V P +SQ V + ++V + +++ +A C L QQ ++ LTE +
Sbjct: 212 QDVDIVVSPCRSSQAVSMTLEDYVDHVQSIVVYAVCEERLSQQDEEELTEIKEKYKLPVF 271
Query: 181 ---ADSTDARNMGFNFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGT 229
ST R +G + V +A++ ME LGF + G G+
Sbjct: 272 FIRTSSTRDRLIG---GSEGVRSALY----EQLME-LGFLKRGLCNCGAAGS 315
>sp|Q2VZV0|IF2_MAGSA Translation initiation factor IF-2 OS=Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264) GN=infB PE=3 SV=1
Length = 872
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 66/175 (37%), Gaps = 24/175 (13%)
Query: 263 TKIQGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNH-----------KFTVNVVRNLSQK 311
T + E G +H+G + T+ GD + P H K T VV ++
Sbjct: 396 TDVVSGEAGGITQHIGAYQVTMSSGDKITFIDTPGHEAFTAMRARGAKVTDIVVLVVAAD 455
Query: 312 THWRIKTYLAISHLDVHKVNSIVA--DMRKVLAKNPQVEQQRLHRRVFLENINPESQSLN 369
+T AI H V IVA + K A +V Q+ L + E + + ++
Sbjct: 456 DGIMPQTVEAIRHAKAAGVPIIVAINKIDKPGATPEKVRQELLQHELVTEELGGDVLAIE 515
Query: 370 ILVSCFVKTSRFEEYLCVKEAILLDLLHVISHHRARMATPIRTVQKIYSEPDLEN 424
+ + + EE + + +A +LDL A P R Q + E +E
Sbjct: 516 VSAKKRLNLEKLEEAILL-QAEILDL----------KANPTRAAQGVVVEAKMEK 559
>sp|P09180|RL4_DROME 60S ribosomal protein L4 OS=Drosophila melanogaster GN=RpL4 PE=2
SV=2
Length = 401
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 374 CFVKTSRFEEYLCVKEAILLDLLHVISHHRARMATPIRTVQKIYSEPDLENIPFADTIFT 433
F R V++ I L+ + RA +A RTV K+ ++ +N+ A + F
Sbjct: 312 VFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKVLAKAKKQNVELAKSHFA 371
Query: 434 H--SRAAANRPFLL 445
+ ++AAANR LL
Sbjct: 372 NVATKAAANRAKLL 385
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 174,376,650
Number of Sequences: 539616
Number of extensions: 6806663
Number of successful extensions: 21395
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 21363
Number of HSP's gapped (non-prelim): 32
length of query: 502
length of database: 191,569,459
effective HSP length: 122
effective length of query: 380
effective length of database: 125,736,307
effective search space: 47779796660
effective search space used: 47779796660
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)