BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010735
(502 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 506 bits (1304), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/480 (51%), Positives = 327/480 (68%), Gaps = 1/480 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+ K+TK+FIN E+ SVSGK F +P T E + + EGDKEDVD AVKAARQAF G P
Sbjct: 17 QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K AD GKL S A + D+ G TLRY AG
Sbjct: 77 WRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKI G + M YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
DEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L
Sbjct: 317 DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWG 376
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
+PT+F++VT+DM IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI T D
Sbjct: 377 NKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTND 436
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496
++ A TVS ++++G +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 437 IDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 489 bits (1260), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/483 (50%), Positives = 320/483 (66%), Gaps = 1/483 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ C A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA +
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK+V
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
Query: 494 TPI 496
+
Sbjct: 493 VKV 495
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 489 bits (1260), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/483 (50%), Positives = 320/483 (66%), Gaps = 1/483 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 7 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 66
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 67 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 126
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 127 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 186
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 187 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 246
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ C A SR +VQE
Sbjct: 247 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 306
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 307 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 366
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA +
Sbjct: 367 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 426
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK+V
Sbjct: 427 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 486
Query: 494 TPI 496
+
Sbjct: 487 VKV 489
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 488 bits (1256), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/483 (50%), Positives = 319/483 (66%), Gaps = 1/483 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+F GST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ C A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA +
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK+V
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
Query: 494 TPI 496
+
Sbjct: 493 VKV 495
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 488 bits (1255), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/483 (50%), Positives = 320/483 (66%), Gaps = 1/483 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ C A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA +
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG G++ G L Y +VK+V
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGQELGEYGLQAYTEVKTVT 492
Query: 494 TPI 496
+
Sbjct: 493 VKV 495
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 487 bits (1254), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/483 (50%), Positives = 320/483 (66%), Gaps = 1/483 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+L+LGGKSP +I D D++ A + A + FN+G+ C A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA +
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK+V
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
Query: 494 TPI 496
+
Sbjct: 493 VKV 495
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 485 bits (1249), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/483 (50%), Positives = 319/483 (66%), Gaps = 1/483 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA +
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK+V
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
Query: 494 TPI 496
+
Sbjct: 493 VKV 495
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 485 bits (1248), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/483 (50%), Positives = 319/483 (66%), Gaps = 1/483 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA +
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK+V
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
Query: 494 TPI 496
+
Sbjct: 493 VKV 495
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 484 bits (1247), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/480 (50%), Positives = 319/480 (66%), Gaps = 1/480 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+I+ TKLFIN E+ +SVSGKTF +P T E I + E DKEDVD AVKAAR+AF G P
Sbjct: 17 KIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSP 76
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K AD GK+ + A + D+ LRY AG
Sbjct: 77 WRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKI G + + YT EPIGV G I PWN P + K+ PAL G T+IVKPAE
Sbjct: 137 ADKIQGRTIPVDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AAA SNLK V+LELG K+P ++F D D+++A + A G+ N+G+ C+A+S+++V+E IY
Sbjct: 257 AAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
DEF ++ VE+AK +V G+P P V GPQ++K Q ++I+ IE GK+EGA L
Sbjct: 317 DEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWG 376
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
+PT+F+NVT+DM IAK EIFGPV +MKFK+++E IK ANNT YGL AG+ TKD
Sbjct: 377 NKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKD 436
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496
L+ A TVS +++AG +W+NCY A + P GG+KMSG GR+ G +H Y +VK+V I
Sbjct: 437 LDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGHGREMGEYGIHEYTEVKTVTMKI 496
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 483 bits (1243), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/473 (50%), Positives = 314/473 (66%), Gaps = 1/473 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ C A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA +
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 486
TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAY 485
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 482 bits (1241), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/480 (50%), Positives = 317/480 (66%), Gaps = 1/480 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP- 76
EIK+TK+FIN E+ +S SG+ F +P TGE + + E DK D+D AV+AAR AF G
Sbjct: 15 EIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSV 74
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
W R +ER ++ K AD GK A D+ G TLRYYAG
Sbjct: 75 WRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGW 134
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKIHG + + +T EPIGV G IIPWNFP MF K++PAL G T+++KPAE
Sbjct: 135 ADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAE 194
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL ALY L K AG P GV+N++PG+GPTAGAAIASH+ IDK++FTGST+VG+ + +
Sbjct: 195 QTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQE 254
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK V+LELGGKSP +IF D D++ A + A G+ FN+G+ C A SR++V+E IY
Sbjct: 255 AAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIY 314
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
+EF K+ VE+AK +VG PFDP QGPQ+DKKQ+++IL I+ G EGA L
Sbjct: 315 EEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLG 374
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
EPT+F+NVT+DM IAK EIFGPV +++FKT++E I+ ANN+ +GL A + T D
Sbjct: 375 RKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTND 434
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496
+N A VS +++AG +WINCY A ++ P+GG+KMSG GR+ G L Y +VK+V I
Sbjct: 435 INKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVKI 494
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 479 bits (1233), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/473 (50%), Positives = 313/473 (66%), Gaps = 1/473 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
+PT+F +V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA +
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 486
TKDL+ AN +S++++AG +W+NCY F + P+GGYKMSG GR+ G L Y
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAY 485
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 476 bits (1226), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/483 (48%), Positives = 317/483 (65%), Gaps = 1/483 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ + ++FIN E+ D+VS KTF T++P TG+ I +AEGDK DVD AVKAAR AF
Sbjct: 12 QQPEVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQL 71
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R +ER ++ + AD GK + + + D+ LRYY
Sbjct: 72 GSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYY 131
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 132 AGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 191
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+NV+PGFGPTAGAAIASH D+DKV+FTGST+VG
Sbjct: 192 VAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHL 251
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA SNLK V+LE+GGKSP +I D D++ A + A + FN+G+ C A SR +VQE
Sbjct: 252 IQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 311
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IY EF ++ V +AK+ VVG+PFD QGPQVD+ QF ++L YI+ GK EG LL
Sbjct: 312 DIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGG 371
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
+PT+F ++ + M IAK EIFGPVM ++KFK++EE + ANN++YGLAA +
Sbjct: 372 AAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVF 431
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
TKDL+ AN +S++++AG +W+NCY F + P+GGYK+SG GR+ G L Y +VK+V
Sbjct: 432 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTVT 491
Query: 494 TPI 496
+
Sbjct: 492 VRV 494
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/488 (39%), Positives = 296/488 (60%), Gaps = 10/488 (2%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
K +MP +LFI GEFVD+ KT+ TI+P G I +++ DVD AV AA++
Sbjct: 30 KLTLQMP----YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 71 AFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 130
AF++G W + + +R ++ + AD G +++ A + + T
Sbjct: 86 AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 131 RYYAGAADKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAA 186
RY+AG DKI G + +++A L +EP+GV G +IPWN+P M K + LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 187 GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
G T+++KPA+ TPL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
ST+VG+ +M++ A SN+K VSLELGGKSPL+IF D D+N A M + + FNKGE C+A+
Sbjct: 266 STEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAA 325
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA 366
R++V+E I+++F +K+VE+ + +G+P + GPQ + +++ Y + G +EGA
Sbjct: 326 GRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGA 385
Query: 367 TLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNT 424
TL+ +PT+FT+V + M IAK E FGP+M + +F V+ + AN T
Sbjct: 386 TLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANAT 445
Query: 425 RYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 484
+GLA+G+ T+D+N A VS ++AG ++IN Y D P+GG+K SGFG+D G +L+
Sbjct: 446 EFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALN 505
Query: 485 NYLQVKSV 492
YL++K+V
Sbjct: 506 EYLRIKTV 513
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/488 (39%), Positives = 296/488 (60%), Gaps = 10/488 (2%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
K +MP +LFI GEFVD+ KT+ TI+P G I +++ DVD AV AA++
Sbjct: 30 KLTLQMP----YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 71 AFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 130
AF++G W + + +R ++ + AD G +++ A + + T
Sbjct: 86 AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 131 RYYAGAADKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAA 186
RY+AG DKI G + +++A L +EP+GV G +IPWN+P M K + LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 187 GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
G T+++KPA+ TPL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
ST+VG+ +M++ A SN+K VSL+LGGKSPL+IF D D+N A M + + FNKGE C+A+
Sbjct: 266 STEVGKHIMKSCALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAA 325
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA 366
R++V+E I+++F +K+VE+ + +G+P + GPQ + +++ Y + G +EGA
Sbjct: 326 GRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGA 385
Query: 367 TLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNT 424
TL+ +PT+FT+V + M IAK E FGP+M + +F V+ + AN T
Sbjct: 386 TLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANAT 445
Query: 425 RYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 484
+GLA+G+ T+D+N A VS ++AG ++IN Y D P+GG+K SGFG+D G +L+
Sbjct: 446 EFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALN 505
Query: 485 NYLQVKSV 492
YL++K+V
Sbjct: 506 EYLRIKTV 513
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/488 (39%), Positives = 295/488 (60%), Gaps = 10/488 (2%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
K +MP +LFI GEFVD+ KT+ TI+P G I +++ DVD AV AA++
Sbjct: 30 KLTLQMP----YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 71 AFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 130
AF++G W + + +R ++ + AD G +++ A + + T
Sbjct: 86 AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 131 RYYAGAADKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAA 186
RY+AG DKI G + +++A L +EP+GV G +IPWN+P M K + LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 187 GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
G T+++KPA+ TPL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
ST+VG+ +M++ A SN+K VSL LGGKSPL+IF D D+N A M + + FNKGE C+A+
Sbjct: 266 STEVGKHIMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAA 325
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA 366
R++V+E I+++F +K+VE+ + +G+P + GPQ + +++ Y + G +EGA
Sbjct: 326 GRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGA 385
Query: 367 TLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNT 424
TL+ +PT+FT+V + M IAK E FGP+M + +F V+ + AN T
Sbjct: 386 TLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANAT 445
Query: 425 RYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 484
+GLA+G+ T+D+N A VS ++AG ++IN Y D P+GG+K SGFG+D G +L+
Sbjct: 446 EFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALN 505
Query: 485 NYLQVKSV 492
YL++K+V
Sbjct: 506 EYLRIKTV 513
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/488 (39%), Positives = 295/488 (60%), Gaps = 10/488 (2%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
K +MP +LFI GEFVD+ KT+ TI+P G I +++ DVD AV AA++
Sbjct: 30 KLTLQMP----YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 71 AFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 130
AF++G W + + +R ++ + AD G +++ A + + T
Sbjct: 86 AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 131 RYYAGAADKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAA 186
RY+AG DKI G + +++A L +EP+GV G +IPWN+P M K + LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 187 GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
G T+++KPA+ TPL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
ST+VG+ +M++ A SN+K VSLELGGKSPL+IF D D+N A M + + FNKGE +A+
Sbjct: 266 STEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAA 325
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA 366
R++V+E I+++F +K+VE+ + +G+P + GPQ + +++ Y + G +EGA
Sbjct: 326 GRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGA 385
Query: 367 TLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNT 424
TL+ +PT+FT+V + M IAK E FGP+M + +F V+ + AN T
Sbjct: 386 TLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANAT 445
Query: 425 RYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 484
+GLA+G+ T+D+N A VS ++AG ++IN Y D P+GG+K SGFG+D G +L+
Sbjct: 446 EFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALN 505
Query: 485 NYLQVKSV 492
YL++K+V
Sbjct: 506 EYLRIKTV 513
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/488 (39%), Positives = 295/488 (60%), Gaps = 10/488 (2%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
K +MP +LFI GEFVD+ KT+ TI+P G I +++ DVD AV AA++
Sbjct: 30 KLTLQMP----YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 71 AFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 130
AF++G W + + +R ++ + AD G +++ A + + T
Sbjct: 86 AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 131 RYYAGAADKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAA 186
RY+AG DKI G + +++A L +EP+GV G +IPWN+P M K + LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 187 GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
G T+++KPA+ TPL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
ST+VG+ +M++ A SN+K VSLELGGKSPL+IF D D+N A M + + FNKGE +A+
Sbjct: 266 STEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAA 325
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA 366
R++V+E I+++F +K+VE+ + +G+P + GPQ + +++ Y + G +EGA
Sbjct: 326 GRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGA 385
Query: 367 TLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNT 424
TL+ +PT+FT+V + M IAK E FGP+M + +F V+ + AN T
Sbjct: 386 TLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANAT 445
Query: 425 RYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 484
+GLA+G+ T+D+N A VS ++AG ++IN Y D P+GG+K SGFG+D G +L+
Sbjct: 446 EFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALN 505
Query: 485 NYLQVKSV 492
YL++K+V
Sbjct: 506 EYLRIKTV 513
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/488 (39%), Positives = 294/488 (60%), Gaps = 10/488 (2%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
K +MP +LFI GEFVD+ KT+ TI+P G I +++ DVD AV AA++
Sbjct: 30 KLTLQMP----YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 71 AFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 130
AF++G W + + +R ++ + AD G +++ A + + T
Sbjct: 86 AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 131 RYYAGAADKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAA 186
RY+AG DKI G + +++A L +EP+GV G +IPWN+P M K + LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 187 GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
G T+++KPA+ TPL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
ST+VG+ +M++ A SN+K VSL LGGKSPL+IF D D+N A M + + FNKGE +A+
Sbjct: 266 STEVGKHIMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAA 325
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA 366
R++V+E I+++F +K+VE+ + +G+P + GPQ + +++ Y + G +EGA
Sbjct: 326 GRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGA 385
Query: 367 TLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNT 424
TL+ +PT+FT+V + M IAK E FGP+M + +F V+ + AN T
Sbjct: 386 TLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANAT 445
Query: 425 RYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 484
+GLA+G+ T+D+N A VS ++AG ++IN Y D P+GG+K SGFG+D G +L+
Sbjct: 446 EFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALN 505
Query: 485 NYLQVKSV 492
YL++K+V
Sbjct: 506 EYLRIKTV 513
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/486 (39%), Positives = 275/486 (56%), Gaps = 10/486 (2%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+LFI+GE+ + + I+P T E I I EDV++AV AAR+AF W SG
Sbjct: 9 QLFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSG 68
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
A R + A GK A + DI A+ Y+AG A+ + G
Sbjct: 69 AHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVL-DIDDVASCFEYFAGQAEALDG 127
Query: 143 E-----VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
+ L M R + + LR+P+GVVG I PWN+P M K++PALAAGCT ++KP+E
Sbjct: 128 KQKAPVTLPMER-FKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL 186
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
+ L F + G+P GVLN++ G GP AGA + SH D+DK++FTGS+ G +VM A
Sbjct: 187 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVM-A 245
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
+A +KPV+LELGGKSP+++F+DVD++ + + G + G+IC A+SR+ V E I
Sbjct: 246 SAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAA 305
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT--XXXXX 375
EF KLV+ K + DPF+ R GP + K Q+D+I+ +I K EGAT+L
Sbjct: 306 EFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEH 365
Query: 376 XXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435
EPTI T+++ M I K E+FGPV+ + F + +EAI AN+T YGLAA + +
Sbjct: 366 LKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSN 425
Query: 436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495
DL +++++ G +W+NC P+GG K SGFGR+ G + NYL +K V
Sbjct: 426 DLERCERITKALEVGAVWVNCSQPCFVQAPWGGIKRSGFGRELGEWGIQNYLNIKQVTQD 485
Query: 496 IFNSPW 501
I + PW
Sbjct: 486 ISDEPW 491
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 359 bits (921), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 191/481 (39%), Positives = 276/481 (57%), Gaps = 6/481 (1%)
Query: 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
M + KL+I G +V++ SG TFETI+P GE +A++ +EDV+ AV++A +
Sbjct: 1 MARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QK 58
Query: 76 PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG 135
W + +R I+ + D GK + + DI A+ L YYAG
Sbjct: 59 VWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAG 118
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
I GE + + YT REP+GVV I WN+P + K +PALAAG MI KP+
Sbjct: 119 LVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPS 178
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
E TPL AL A + AGVPDGV NV+ G G G + H I+K+SFTG T G++VM
Sbjct: 179 EVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+A++S+LK V++ELGGKSPL+IF D D++ AAD+A++ F+ G++C +RV++
Sbjct: 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQ 298
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXX 375
FE K++E+ + +GDP D GP V + +L YIE GK + A LL
Sbjct: 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERV 358
Query: 376 XXXX----XXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAG 431
PT+FT+ +DM I + EIFGPVM+++ + +EAI+ AN+T YGLAAG
Sbjct: 359 TDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAG 418
Query: 432 IMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS 491
++T+DL A+ + AGI WIN + ++ P GGYK SG GR+ GL +L +Y ++KS
Sbjct: 419 VVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKS 478
Query: 492 V 492
V
Sbjct: 479 V 479
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 358 bits (919), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 190/474 (40%), Positives = 274/474 (57%), Gaps = 6/474 (1%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
KL+I G +V++ SG TFETI+P GE +A++ +EDV+ AV++A + W +
Sbjct: 7 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTA 64
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
+R I+ + D GK + + DI A+ L YYAG I G
Sbjct: 65 MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 124
Query: 143 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
E + + YT REP+GVV I WN+P + K +PALAAG MI KP+E TPL A
Sbjct: 125 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 184
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
L A + AGVPDGV NV+ G G G + H I+K+SFTG T G++VM +A++S+
Sbjct: 185 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 244
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
LK V++ELGGKSPL+IF D D++ AAD+A++ F+ G++C +RV++ FE K
Sbjct: 245 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 304
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXX--- 379
++E+ + +GDP D GP V + +L YIE GK + A LL
Sbjct: 305 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 364
Query: 380 -XXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 438
PT+FT+ +DM I + EIFGPVM+++ + +EAI+ AN+T YGLAAG++T+DL
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 424
Query: 439 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
A+ + AGI WIN + ++ P GGYK SG GR+ GL +L +Y ++KSV
Sbjct: 425 RAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 356 bits (913), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 189/474 (39%), Positives = 273/474 (57%), Gaps = 6/474 (1%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
KL+I G +V++ SG TFETI+P GE +A++ +EDV+ AV++A + W +
Sbjct: 7 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTA 64
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
+R I+ + D GK + + DI A+ L YYAG I G
Sbjct: 65 MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 124
Query: 143 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
E + + YT REP+GVV I WN+P + K +PALAAG MI KP+E TPL A
Sbjct: 125 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 184
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
L A + AGVPDGV NV+ G G G + H I+K+SFTG T G++VM +A++S+
Sbjct: 185 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 244
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
LK V++ LGGKSPL+IF D D++ AAD+A++ F+ G++C +RV++ FE K
Sbjct: 245 LKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 304
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXX--- 379
++E+ + +GDP D GP V + +L YIE GK + A LL
Sbjct: 305 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 364
Query: 380 -XXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 438
PT+FT+ +DM I + EIFGPVM+++ + +EAI+ AN+T YGLAAG++T+DL
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 424
Query: 439 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
A+ + AGI WIN + ++ P GGYK SG GR+ GL +L +Y ++KSV
Sbjct: 425 RAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 355 bits (911), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 190/481 (39%), Positives = 275/481 (57%), Gaps = 6/481 (1%)
Query: 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
M + KL+I G +V++ SG TFETI+P GE +A++ +EDV+ AV++A +
Sbjct: 1 MARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QK 58
Query: 76 PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG 135
W + +R I+ + D GK + + DI A+ L YYAG
Sbjct: 59 VWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAG 118
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
I GE + + YT REP+GVV I WN+P + K +PALAAG MI KP+
Sbjct: 119 LVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPS 178
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
E TPL AL A + AGVPDGV NV+ G G G + H I+K+SFTG T G++VM
Sbjct: 179 EVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+A++S+LK V++ELGGKSPL+IF D D++ AAD+A++ F+ G++ +RV++
Sbjct: 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQ 298
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXX 375
FE K++E+ + +GDP D GP V + +L YIE GK + A LL
Sbjct: 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERV 358
Query: 376 XXXX----XXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAG 431
PT+FT+ +DM I + EIFGPVM+++ + +EAI+ AN+T YGLAAG
Sbjct: 359 TDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAG 418
Query: 432 IMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS 491
++T+DL A+ + AGI WIN + ++ P GGYK SG GR+ GL +L +Y ++KS
Sbjct: 419 VVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKS 478
Query: 492 V 492
V
Sbjct: 479 V 479
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 355 bits (910), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 190/481 (39%), Positives = 275/481 (57%), Gaps = 6/481 (1%)
Query: 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
M + KL+I G +V++ SG TFETI+P GE +A++ +EDV+ AV++A +
Sbjct: 1 MARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QK 58
Query: 76 PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG 135
W + +R I+ + D GK + + DI A+ L YYAG
Sbjct: 59 VWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAG 118
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
I GE + + YT REP+GVV I WN+P + K +PALAAG MI KP+
Sbjct: 119 LVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPS 178
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
E TPL AL A + AGVPDGV NV+ G G G + H I+K+SFTG T G++VM
Sbjct: 179 EVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+A++S+LK V++ELGGKSPL+IF D D++ AAD+A++ F+ G++ +RV++
Sbjct: 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQ 298
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXX 375
FE K++E+ + +GDP D GP V + +L YIE GK + A LL
Sbjct: 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERV 358
Query: 376 XXXX----XXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAG 431
PT+FT+ +DM I + EIFGPVM+++ + +EAI+ AN+T YGLAAG
Sbjct: 359 TDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAG 418
Query: 432 IMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS 491
++T+DL A+ + AGI WIN + ++ P GGYK SG GR+ GL +L +Y ++KS
Sbjct: 419 VVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKS 478
Query: 492 V 492
V
Sbjct: 479 V 479
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 344 bits (882), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 205/493 (41%), Positives = 276/493 (55%), Gaps = 13/493 (2%)
Query: 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-- 76
I +LFING++ V K I+P T I I KEDVD+AV AA+ A
Sbjct: 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGA 64
Query: 77 -WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG 135
W SGA R + A GK A DI A YYA
Sbjct: 65 DWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYAD 123
Query: 136 AADKIHGE-----VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 190
A+K+ L M + + LREPIGVVG I PWN+P M KV+PALAAGC
Sbjct: 124 LAEKLDARQKAPVSLPMD-TFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAA 182
Query: 191 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 250
I+KP+E L L + K G+P GVLN++ G GP AGA +A+H D+DKV+FTGS+
Sbjct: 183 ILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSAT 242
Query: 251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 310
G ++M AAA +KPVSLELGGKSPL++F+DVD++ AA+ A+ G + G+IC A+SR+
Sbjct: 243 GSKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLI 301
Query: 311 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 370
+ E I EF ++V+ K + DP + R GP V + Q+++IL ++ + K EGAT+LT
Sbjct: 302 LHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILT 361
Query: 371 XXXXXXXXXXX--XEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL 428
EPTI T+VT +M I + E+FGPV+ + F T EEAI AN+T YGL
Sbjct: 362 GGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGL 421
Query: 429 AAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 488
A +++ DL V+++ +AGI+W+NC + P+GG K SGFGR+ G L NYL
Sbjct: 422 GAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLS 481
Query: 489 VKSVVTPIFNSPW 501
VK V I PW
Sbjct: 482 VKQVTQYISEEPW 494
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 335 bits (860), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 193/480 (40%), Positives = 272/480 (56%), Gaps = 13/480 (2%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+L+I GE+ + V I+P T E I I EDVD+AV+AAR+A W +G
Sbjct: 25 QLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWGSTTG 84
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGK--LHSWAKMGDIPGAANTLRYYAGAADKI 140
A+R + A GK S A M D+ G YYAG A+ +
Sbjct: 85 AQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGC---FEYYAGLAEAL 141
Query: 141 HGEVLK----MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
+ S + + Y LREP+GVVG I PWN+P M KV+PALAAGC I+KP+E
Sbjct: 142 DSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSE 201
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
+ L + + G+P G LN++ G GP AG +ASH +DK+SFTGS G ++M
Sbjct: 202 LASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMT 261
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVD-VNTAADMALLGILFNKGEICVASSRVYVQEGI 315
AAA +KPVSLELGGKSP+++FDD+D ++ AA+ L GI N G++C A+SR+ VQE I
Sbjct: 262 AAAQL-VKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENI 320
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT--XXX 373
F +L++ K + DP + + GP V Q++++L +I + K EGAT+L
Sbjct: 321 ASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERP 380
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
+PTI T+V M I K E+FGPV+ + FKT E+AI+ AN+T+YGL A +M
Sbjct: 381 QHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVM 440
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
+KD+ +++ + GIIWINC ++ P+GG K SGFGRD G L N+L +K V
Sbjct: 441 SKDVKRCERFTKAFQTGIIWINCSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQVT 500
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 335 bits (859), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 200/489 (40%), Positives = 273/489 (55%), Gaps = 13/489 (2%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG---PWPR 79
+LFI+GE+ + K I+P T I I KEDVDLAV AA++A W
Sbjct: 9 QLFIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKNGRDWSA 68
Query: 80 FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
SG+ R + A GK A + D+ YYAG A++
Sbjct: 69 ASGSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEEA-LADLDDVVACFEYYAGLAEE 127
Query: 140 IHGE-----VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194
+ + L M + Y L+EPIGVV I PWN+P M K++PALAAGC I+KP
Sbjct: 128 LDSKQKAPISLPMD-TFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKP 186
Query: 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
+E + L + K G+P GVLN+V G G AGA++ASH D+DK+SFTGS+ G ++
Sbjct: 187 SELASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKI 246
Query: 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
M AA +KPVSLELGGKSP+++F+DVD++ A+ + G F G+IC A+SR+ V E
Sbjct: 247 MTTAAQL-VKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIVHES 305
Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT--XX 372
I EF KLV+ A+ + DP + R GP V + Q+ ++L+ I K EGAT+LT
Sbjct: 306 IAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRR 365
Query: 373 XXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGI 432
EPTI T+VT M I + E+FGPV+A+ F T EEAI AN+T YGL + +
Sbjct: 366 PEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGSAV 425
Query: 433 MTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
M+ DL +S++++AGI+WINC P+GG K SGFGR+ G L NYL VK V
Sbjct: 426 MSNDLERCERLSKALQAGIVWINCAQPSFIQAPWGGIKRSGFGRELGEWGLENYLSVKQV 485
Query: 493 VTPIFNSPW 501
+ PW
Sbjct: 486 TRYTSDEPW 494
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 333 bits (853), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 192/480 (40%), Positives = 271/480 (56%), Gaps = 13/480 (2%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+L+I GE+ + V I+P T E I I EDVD+AV+AAR+A W +G
Sbjct: 25 QLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWGSTTG 84
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGK--LHSWAKMGDIPGAANTLRYYAGAADKI 140
A+R + A GK S A M D+ G YYAG A+ +
Sbjct: 85 AQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGC---FEYYAGLAEAL 141
Query: 141 HGEVLK----MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
+ S + + Y LREP+GVVG I PWN+P M KV+PALAAGC I+KP+E
Sbjct: 142 DSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSE 201
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
+ L + + G+P G LN++ G GP AG +ASH +DK+SFTGS G ++M
Sbjct: 202 LASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMT 261
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVD-VNTAADMALLGILFNKGEICVASSRVYVQEGI 315
AAA +KPVSL LGGKSP+++FDD+D ++ AA+ L GI N G++C A+SR+ VQE I
Sbjct: 262 AAAQL-VKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENI 320
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT--XXX 373
F +L++ K + DP + + GP V Q++++L +I + K EGAT+L
Sbjct: 321 ASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERP 380
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
+PTI T+V M I K E+FGPV+ + FKT E+AI+ AN+T+YGL A +M
Sbjct: 381 QHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVM 440
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
+KD+ +++ + GIIWINC ++ P+GG K SGFGRD G L N+L +K V
Sbjct: 441 SKDVKRCERFTKAFQTGIIWINCSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQVT 500
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 330 bits (845), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/480 (37%), Positives = 274/480 (57%), Gaps = 13/480 (2%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+ +I+GE+V+S + T + I+P E I ++EG KED + A+ AAR+AF+ G W + +
Sbjct: 34 RQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQET- 92
Query: 83 AERRGIMLK-FADXXXXXXXXXXXXXXXXXGKL--HSWAKMGDIPGAANTLRYYAGAADK 139
AE RG ++ AD GK S+A M DI N Y+AG ADK
Sbjct: 93 AETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDI---HNVFMYFAGLADK 149
Query: 140 IHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
GE++ + ++EP+GVV I PWN+P K++PALA GC++++KP+E T
Sbjct: 150 DGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEIT 209
Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
PL + L + G P G +N++ G G G ++ H ++D VSFTG + G+ +M+ A
Sbjct: 210 PLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNA 269
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
A +N+ ++LELGGK+P +IFDD D A D AL G F+ G++C A SR+ VQ I D+
Sbjct: 270 A-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDK 328
Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXX 378
FE+ L+++ K +G+ FD GP + + ++I SY++ K EGAT+
Sbjct: 329 FEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRD 388
Query: 379 XXXX----EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMT 434
EPT+ TN M I + E+FGPV+ + F+T +EAI+ AN++ YGLA + +
Sbjct: 389 DLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFS 448
Query: 435 KDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494
KD+ A V+ ++ G +WIN + + + P+GGYK SG GR+ G E L YL K ++T
Sbjct: 449 KDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILT 508
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 327 bits (838), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 190/491 (38%), Positives = 271/491 (55%), Gaps = 9/491 (1%)
Query: 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG--- 75
+ +LF++GE+ G+ ++P T I I G EDVD AV AAR A
Sbjct: 22 VPLRQLFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRNRGR 81
Query: 76 PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWA--KMGDIPGAANTLRYY 133
W R GA R + A GK + A M D+ G
Sbjct: 82 DWARAPGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAWDMDDVAGCFEYFADQ 141
Query: 134 AGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192
A A DK + + + + REPIGVVG I PWN+P M K++PALAAGCT ++
Sbjct: 142 AEALDKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVL 201
Query: 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
KP+E + L A + K G+P GVLN+V G GP AGA +++H D+DKV+FTGS + G+
Sbjct: 202 KPSELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGK 261
Query: 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312
++M A+A +KPV+LELGGKSP+++FDDVD++ A + L G + G+IC A+SR+ +
Sbjct: 262 KIM-ASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIH 320
Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXX 372
I +F +++V AK V DP + R GP V + Q+++I +I + K +GAT+LT
Sbjct: 321 TKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGG 380
Query: 373 XXXXXXXXX--XEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 430
EPTI T++T M I + E+FGPV+ + +F T +EAI+ AN+T+YGLA
Sbjct: 381 VRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAG 440
Query: 431 GIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490
+++ D +S I AG IW+NC P+GG K SGFGR+ G + NYL VK
Sbjct: 441 AVISGDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVK 500
Query: 491 SVVTPIFNSPW 501
V I + PW
Sbjct: 501 QVTEYISDEPW 511
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 314 bits (805), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 182/481 (37%), Positives = 265/481 (55%), Gaps = 14/481 (2%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
FI GEFV S SG+TF ++DP T E + A G + +VD A KAA +AF W R E
Sbjct: 30 FIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQR--WSRTKAKE 87
Query: 85 RRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK-IHGE 143
R+ +L+ A+ G++ + + AA +YA A+ +
Sbjct: 88 RKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDR 146
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+ R YT+R P G VG I PWN P + +++PALA G T+++KPAE +P A
Sbjct: 147 TFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTAT 206
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
A + K A +P GV N+V GFG AGAA+ +H + ++ TG T+ G+ VM+ AA +L
Sbjct: 207 KLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA-DHL 265
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
K +S ELGGKSP L+F D D+ A D + I GE C ASSR+ V+E I+++F K+
Sbjct: 266 KRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKV 325
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXE 383
VE+A+A VG P DP GP + + R+L Y+E GKREGA LL +
Sbjct: 326 VERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGED 385
Query: 384 --------PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435
PT+F M IA+ EIFGPV+ + FK EEA++ AN+T+YGLAA + T+
Sbjct: 386 LSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTR 444
Query: 436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495
DL A+ ++ + AG++++N + P+GG K SG R+ G +L Y +K++ P
Sbjct: 445 DLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALP 504
Query: 496 I 496
+
Sbjct: 505 L 505
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 314 bits (805), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 174/476 (36%), Positives = 269/476 (56%), Gaps = 12/476 (2%)
Query: 25 FINGEFVDSVSGKTFETI-DPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
+ G + S G T E + +P TG + ++ E+VD AV++A+ A+ W + +G
Sbjct: 23 YWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLK--WSKMAGI 80
Query: 84 ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER +ML+ A GK + A+ DI A + YYAG A + G+
Sbjct: 81 ERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQ 139
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+++ YT REP+GV I+ WN+P + K +PALA G ++ KP+ TP+ +
Sbjct: 140 HIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGV 199
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
A + AGVP G++NVV G G G+ + H ++ KVSFTGS G++VM+ +A + +
Sbjct: 200 ILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKT-V 257
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
K V+LELGGKSPLLIF D ++ A AL+ +G++C +RV+VQ I +F +++
Sbjct: 258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEV 317
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL------TXXXXXXX 377
V++ KA VVGDP R G + K Q D++L ++ K+EGA +L T
Sbjct: 318 VKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLK 377
Query: 378 XXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
P + N +DM K EIFGPVM+++ F T EE ++ ANNT +GLA+G+ T+D+
Sbjct: 378 NGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDI 437
Query: 438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
+ A+ V+ ++ AG +IN Y + P+GGYKMSGFGR+ G ++ Y Q+K+V+
Sbjct: 438 SRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVI 493
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 311 bits (797), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 179/472 (37%), Positives = 264/472 (55%), Gaps = 9/472 (1%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
FI+G++V+ +G FE+I P TGE IA++ V+ A+ +A++A W S
Sbjct: 18 FIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRA--QKEWAAMSPMA 75
Query: 85 RRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG-AADKIHGE 143
R I+ + AD GK + D A+ ++ G A ++G+
Sbjct: 76 RGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGD 135
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+ + YT R P+GV I WN+P + K +PAL AG M+ KP+E TPL AL
Sbjct: 136 YIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGAL 194
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
A + AG+P G+ NV+ G T G + +H D+ KVS TGS GR+V AAA +L
Sbjct: 195 KIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRKV-AAAAAGHL 252
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
K V++ELGGKSP+++FDD D+ +A A+LG ++ G++C +RV+VQ+ F + L
Sbjct: 253 KHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENL 312
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT---XXXXXXXXXX 380
+ +A ++GDP D A GP V K Q +++LSYIE GK EGATL+T
Sbjct: 313 KRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGA 372
Query: 381 XXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 440
+PT+F +VT+DM IA+ EIFGPVM ++ F +E + AN T +GLA G+ T DL A
Sbjct: 373 YVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARA 432
Query: 441 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
+ V + AG +WIN Y + P+GG K SGFGR+ +L +Y ++K+V
Sbjct: 433 HRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV 484
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 300 bits (769), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 184/479 (38%), Positives = 261/479 (54%), Gaps = 5/479 (1%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
++ KLFI G++ + E P TGE + ++ DVD AV AAR AFD+GPWP
Sbjct: 7 EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPS 66
Query: 80 FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
ER ++ G+ + + G+ + Y+AGAADK
Sbjct: 67 TPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADK 126
Query: 140 IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
+ + Q REP+GVVG I+ WN P + K++PAL AGCT+++KPA +TP
Sbjct: 127 VTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETP 186
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
L A A + G+P+GVL+VVPG G G A+ S+ DID +FTGS+ VGR+V + AA
Sbjct: 187 LTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA 245
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
LKP +LELGGKS +I +DVD+ A M + + N G+ CV +R+ YDE
Sbjct: 246 -EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEI 304
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXX 379
+ A VG P DPA + GP + +KQ R+ YI G EGA L+
Sbjct: 305 VAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLD 364
Query: 380 XX--XEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
+PT+F +V M IA+ EIFGPV+A++ + T E+AI AN++ YGLA + T D+
Sbjct: 365 NGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDV 424
Query: 438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496
+S+ IR G IN ++AFD P+GGYK SG GR+ G E + ++ Q KSV+ P+
Sbjct: 425 PKGIKISQQIRTGTYGIN-WYAFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 299 bits (765), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 187/484 (38%), Positives = 266/484 (54%), Gaps = 6/484 (1%)
Query: 23 KLFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
+ ++G+ VD+ SG T + + P GE + E +DV AV AAR+AFD GPWPR S
Sbjct: 24 QXLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRXS 83
Query: 82 GAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
GAER + K AD GK + A+ G+I A+ Y AG A +
Sbjct: 84 GAERSRLXFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALE 142
Query: 142 GEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
G+ + G LREP+GVVG I PWNFP + +V A+ +GCT+++KP+E T
Sbjct: 143 GQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSG 202
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
++ A LA+ AG+PDGV NVV G+G AG +A ++D V+FTGS VG ++ + AA
Sbjct: 203 TSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAAR 262
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
+ +K V LELGGK P ++F D D++ AAD G+ N G+ C++ SR+ VQEGI D
Sbjct: 263 T-VKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALX 321
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT-XXXXXXXXX 379
++L++ ++ GDP + + G + + +++ SY+ G GA LL
Sbjct: 322 ERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGREAG 381
Query: 380 XXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 439
PT+F VT D IA+ EIFGPV++ + FKT +EA+ AN T +GL+A + + +L
Sbjct: 382 LYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLET 441
Query: 440 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV-VTPIFN 498
A R IRAG WIN + P GGYK SG GR+ G Y Q K V VT
Sbjct: 442 ALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLGRP 501
Query: 499 SPWL 502
+PW
Sbjct: 502 APWF 505
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 295 bits (755), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/482 (36%), Positives = 267/482 (55%), Gaps = 7/482 (1%)
Query: 14 FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFD 73
K P + ++ +NG ++D+ G T + +P G I + + A+ A+ +A
Sbjct: 25 LKDPSLLKSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS 84
Query: 74 HGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
W + ER GI+ K+ D GK + A+ G++ AA+ + ++
Sbjct: 85 G--WAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAASFIEWF 141
Query: 134 AGAADKIHGEVLKMSRALQGYT-LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192
A A +++G+ + + Q T +R+P+GV I PWNFP M K +PALAAGCTMIV
Sbjct: 142 AEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIV 201
Query: 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
+PA+ TPL AL LA+ AG+P GVL +V G GA + S+ + K+SFTGST+VGR
Sbjct: 202 RPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGR 261
Query: 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312
+M A + +K +SLELGG +P ++FDD D++ A D A++ N G+ CV ++R+YVQ
Sbjct: 262 LLMAQCAPT-IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQ 320
Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXX 372
G+YD+F +KL K K VG+ +P V GP +++K ++ ++IE +GA L+T
Sbjct: 321 RGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLIT-- 378
Query: 373 XXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGI 432
EP I T VT DML+AK E FGP+ L F T EE I AN+T +GLAA
Sbjct: 379 GGKELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYF 438
Query: 433 MTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
T++ + A VS ++ G++ N + P+GG K SG GR+ + YL+ K +
Sbjct: 439 YTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYI 498
Query: 493 VT 494
+
Sbjct: 499 CS 500
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/469 (34%), Positives = 255/469 (54%), Gaps = 5/469 (1%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+ INGE++D+ +G+ + +P G+ + + + ++ A+ AA +A W +
Sbjct: 11 QALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTA 68
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
ER I+ + + GK + AK G+I AA+ + ++A +I+G
Sbjct: 69 KERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYG 127
Query: 143 EVLKMSRALQGY-TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
+ + +A + +++PIGV I PWNFP M K PALAAGCTM++KPA QTP
Sbjct: 128 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 187
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
AL A LA AGVP GV NVV G G + S+ + K+SFTGST++GRQ+M+ A
Sbjct: 188 ALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA-K 246
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
++K VSLELGG +P ++FDD D++ A + AL N G+ CV ++R+YVQ+G+YD F +
Sbjct: 247 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAE 306
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXX 381
KL + +GD D V GP +D+K ++ +I +GA ++
Sbjct: 307 KLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNF 366
Query: 382 XEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 441
+PTI +V + ++K E FGP+ L +FK + I AN+T +GLAA +DL+
Sbjct: 367 FQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVF 426
Query: 442 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490
V ++ GI+ IN + P+GG K SG GR+ + +YL++K
Sbjct: 427 RVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIK 475
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 292 bits (747), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/469 (34%), Positives = 255/469 (54%), Gaps = 5/469 (1%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+ INGE++D+ +G+ + +P G+ + + + ++ A+ AA +A W +
Sbjct: 11 QALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTA 68
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
ER I+ + + GK + AK G+I AA+ + ++A +I+G
Sbjct: 69 KERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYG 127
Query: 143 EVLKMSRALQGY-TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
+ + +A + +++PIGV I PWNFP M K PALAAGCTM++KPA QTP
Sbjct: 128 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 187
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
AL A LA AGVP GV NVV G G + S+ + K+SFTGST++GRQ+M+ A
Sbjct: 188 ALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA-K 246
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
++K VSLELGG +P ++FDD D++ A + AL N G+ CV ++R+YVQ+G+YD F +
Sbjct: 247 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAE 306
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXX 381
KL + +GD D V GP +D+K ++ +I +GA ++
Sbjct: 307 KLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNF 366
Query: 382 XEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 441
+PTI +V + ++K E FGP+ L +FK + I AN+T +GLAA +DL+
Sbjct: 367 FQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVF 426
Query: 442 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490
V ++ GI+ IN + P+GG K SG GR+ + +YL++K
Sbjct: 427 RVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIK 475
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 291 bits (744), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 174/475 (36%), Positives = 254/475 (53%), Gaps = 11/475 (2%)
Query: 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRF 80
+TK +INGE+V+S S +T E I+P T E I ++A+G+K DVD AV+AA + +
Sbjct: 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FRHT 64
Query: 81 SGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
S ER+ ++ K G S ++ L ++ A D +
Sbjct: 65 SVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQXG---LNHFVAARDAL 121
Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
+ R ++E IGV G I PWNFPT +K++ A AAG +++KP+E+TP
Sbjct: 122 DNYEFEERRG-DDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPF 180
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
A+ A + GVP GV N+V G G G ++ H + SFTGS G ++ + AA
Sbjct: 181 AAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAA- 239
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
+ K VSLELGGKSP ++ DDVD+ AA ++ N G++C A +RV V I D F
Sbjct: 240 KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFL 299
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL---TXXXXXXX 377
+L E+ VG+P + + GP + KKQFD++ +YI G EGA L
Sbjct: 300 AELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLE 359
Query: 378 XXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
PTIF NV IA+ EIFGPV +++ + ++EAI+ AN+T+YGLA ++ KD
Sbjct: 360 KGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIGKDK 419
Query: 438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
+ V+RSI AG + IN D P+GGYK SG GR+ G + +L+VKS+
Sbjct: 420 ETLHKVARSIEAGTVEINEA-GRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSI 473
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 272 bits (695), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 167/484 (34%), Positives = 259/484 (53%), Gaps = 5/484 (1%)
Query: 14 FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFD 73
K P + + +I GE+ + S TFE DP TGE++ + + + A++AA+ A+
Sbjct: 5 MKDPSLLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA 64
Query: 74 HGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
W + ER I+ ++ D GK + AK G+I AA+ + ++
Sbjct: 65 G--WRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAASFIEWF 121
Query: 134 AGAADKIHGEVLKMSRALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192
A ++ G+ L A + ++EPIGV I PWNFP M KV PALAAGC ++V
Sbjct: 122 AEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVV 181
Query: 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
KPAE TP AL A LA+ AGVP GVL+VV G G I S+ + K+SFTGST VGR
Sbjct: 182 KPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGR 241
Query: 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312
+M +A + +K ++LELGG +P ++FDD D++ A + A+ N G+ CV ++R +V
Sbjct: 242 LLMAQSAPT-VKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVH 300
Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXX 372
E +YD F KL VG + GP +++ ++ S+I +GA+L+T
Sbjct: 301 ERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGG 360
Query: 373 XXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGI 432
EPT+ T V DM +AK E FGP+ L +F + EE ++ AN+T +GLAA +
Sbjct: 361 KRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYL 420
Query: 433 MTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
++D+ V+ ++ G++ IN + P+GG K SG GR+ + +Y+ +K +
Sbjct: 421 YSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYL 480
Query: 493 VTPI 496
+
Sbjct: 481 CVAV 484
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 173/487 (35%), Positives = 256/487 (52%), Gaps = 13/487 (2%)
Query: 12 SLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA 71
SL+K + KL INGE V S G+ +P TG+ + IAE E VD AV+AA A
Sbjct: 14 SLYKKAGLMQHKLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAA 72
Query: 72 FDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGK-LHSWAKMGDIPGAANTL 130
F W + + R +LK AD GK LHS A +IP +
Sbjct: 73 FAE--WGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHS-AFNDEIPAIVDVF 129
Query: 131 RYYAGAADKIHGEVLKMSRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAG 187
R++AGAA ++G L L+G+T R+P+GVV I PWN+P M K++PALAAG
Sbjct: 130 RFFAGAARCLNG--LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAG 187
Query: 188 CTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
+++KP+E TPL AL A LAK P GV+N++ G G T G + H + VS TGS
Sbjct: 188 NCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGS 246
Query: 248 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASS 307
G ++ A+S +K +ELGGK+P+++FDD D+ + +N G+ C A+
Sbjct: 247 IATGEHIISHTASS-IKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAAC 305
Query: 308 RVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA- 366
R+Y Q+GIYD +KL G P D + GP +R+ +E K G
Sbjct: 306 RIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHI 365
Query: 367 TLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRY 426
++T PT+ +D I + E+FGPV+++ F E+ + AN+++Y
Sbjct: 366 KVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQY 425
Query: 427 GLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 486
GLA+ + TKD+ A+ VS ++ G W+N +F S+ P+GG K+SG+G+D L L +Y
Sbjct: 426 GLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDY 485
Query: 487 LQVKSVV 493
V+ V+
Sbjct: 486 TVVRHVM 492
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/476 (31%), Positives = 248/476 (52%), Gaps = 13/476 (2%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
T+L I F + ++PRTG I +AE +D AV AA +AF W + +
Sbjct: 26 TQLLIGSRFEAGTEAEE-HILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVG--WSQTT 82
Query: 82 GAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
AER +LK AD GK + K ++P + R++AGA +H
Sbjct: 83 PAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLH 142
Query: 142 GEVLKMSRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
L G+T R+PIG+VG I PWN+P K++PA+ G T++ KP+EQT
Sbjct: 143 APA--AGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQT 200
Query: 199 PLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
PL AL A L +A + P+GV+NV+ G G T G A+ +H + VS TG G++V+ A
Sbjct: 201 PLTALKLARL--IADILPEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAA 258
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
AA + +K LELGGK+P++++ D D+ + +N G+ C A+ R+Y + GIY+
Sbjct: 259 AAKT-VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYE 317
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHG-KREGATLLTXXXXXX 376
+ L D GP + ++Q DR+ S++E ++ + T
Sbjct: 318 KLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGS 377
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
+PT+ T++ I + E+FGPV+++ +F ++A+ AN++ YGLA+ + TKD
Sbjct: 378 DEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKD 437
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
++ A + ++ G WIN +F ++ P+GG K SG+G+D + +L +Y V+ +
Sbjct: 438 ISKAXRAASRLQYGCTWINTHFXLTNEXPHGGIKQSGYGKDXSVYALEDYTAVRHI 493
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 158/473 (33%), Positives = 241/473 (50%), Gaps = 8/473 (1%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
K +ING + D + IDP T EA A I+ G D D A+ AA++AF W S
Sbjct: 27 KFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSP 84
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
ER G + K + G A ++ +R + A +
Sbjct: 85 HERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSF 144
Query: 143 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+ + Q + IGVVG I PWN+P +KV PAL AGCTM++KP+E PL A
Sbjct: 145 QEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSA 204
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
+ FA + A +P GV N++ G G G+ +++H D++ +SFTGST G+ + + A+ +
Sbjct: 205 MLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNT- 263
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
LK V LELGGK +IF D D++ A + +N G+ C A +R+ V++ IYD+ K
Sbjct: 264 LKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKT 322
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX---XXXXXX 379
+ A+ VG GP V K+Q+D+I I+ G EGATL+T
Sbjct: 323 AKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERG 382
Query: 380 XXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 439
PT+F +V M I + EIFGPV++L+ F T +EA+ AN+T YGL I ++D +
Sbjct: 383 YYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSK 442
Query: 440 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
++ +R+G++ +N + +GG K SG R+ GL + +L K++
Sbjct: 443 CRRIAAQVRSGMVEVNGH-ELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 241/473 (50%), Gaps = 9/473 (1%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
FI G++V S T + + P TG+ I I G K D + A++ A+ A W + +
Sbjct: 16 FIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKA--WAKLTART 73
Query: 85 RRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R+ ++ FA+ GKL S A+M ++ A + Y A I G++
Sbjct: 74 RQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDI 132
Query: 145 LKMSRALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
L + Y + P GVV I WNFP + K+ PAL G TM++KP ++TPL
Sbjct: 133 LPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATT 192
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
+AK AG+PDGVLNV+ G G G + ++ TGST G+Q+ + +A +
Sbjct: 193 ELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA-EYM 251
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
PV LELGGK+P+++ DD D++ AA+ AL G N G++C R+YV +YDEF K
Sbjct: 252 TPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKF 311
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXX-- 381
+ K VGDP D + GP+ ++++ D I + ++GAT+ T
Sbjct: 312 LPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGG 371
Query: 382 --XEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 439
EPT+ +V +D ++ E FGP++ ++K ++E+AI+ N++ YGL+A + T+
Sbjct: 372 CWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFAN 431
Query: 440 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
N + G ++IN + G+K SGFG + G L YL+ K+V
Sbjct: 432 INQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 166/477 (34%), Positives = 252/477 (52%), Gaps = 11/477 (2%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
T F+ G ++ + + TF DP +G A+ +A+ + AV+AA +AF W S
Sbjct: 13 TDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 82 GAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
ER ++ K+ + GK A G+I +A L +++ A +++
Sbjct: 69 AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVY 127
Query: 142 GEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
G+++ ++ + L++PIGV I PWNFP+ M KV ALAAGCT++VKPAE TP
Sbjct: 128 GDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPF 187
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTA---GAAIASHMDIDKVSFTGSTDVGRQVMQA 257
AL A LA AG+P GV NV+P A G AI + + K+SFTGST G+ ++
Sbjct: 188 SALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
AA S +K VS+ELGG +P ++FD +V+ A A+ N G+ CV S++ VQ GI+D
Sbjct: 248 AANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHD 306
Query: 318 EFEKKLVEKAKAWV-VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
F K E K + VG+ F+ QGP +++K +++ + +GAT++T
Sbjct: 307 AFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ 366
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
EPT+ NVT+DML E FGP+ ++KF T EEAI AN GLA ++D
Sbjct: 367 LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQD 426
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
V+ + G++ +N +CP+GG K SG GR+ + YL++K V
Sbjct: 427 PAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVC 483
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 239/471 (50%), Gaps = 6/471 (1%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
++I+G+FV + ++P T I+RI +G ED A+ AA +A W
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERA--QPEWEALPAI 66
Query: 84 ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER + K + GK+ A++ ++ A+ + Y A A + GE
Sbjct: 67 ERASWLRKISAGIRERATEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGE 125
Query: 144 VLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+++ R + L + +GV I+PWNFP + K++PAL G T+++KP+E TP A
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
+ FA + G+P GV N+V G G T G +A + + VS TGS G ++M A A N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM-ATAAKN 244
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
+ V LELGGK+P ++ DD D+ A + + N G++C + RVYVQ+GIYD+F +
Sbjct: 245 ITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 323 LVEKAKAWVVGDPFDPA-VRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXX 381
L E +A G+P + + GP ++ +R+ + EGA +
Sbjct: 305 LGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYY 364
Query: 382 XEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 441
PT+ +V ++M I E FGPV+ ++ F T+EEAI AN++ YGL + I T++LNVA
Sbjct: 365 YPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNLNVAM 424
Query: 442 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
+ ++ G +IN + G++ SG G G LH YLQ + V
Sbjct: 425 KAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 247 bits (631), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 239/471 (50%), Gaps = 6/471 (1%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
++I+G+FV + ++P T I+RI +G ED A+ AA +A W
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERA--QPEWEALPAI 66
Query: 84 ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER + K + GK+ A++ ++ A+ + Y A A + GE
Sbjct: 67 ERASWLRKISAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGE 125
Query: 144 VLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+++ R + L + +GV I+PWNFP + K++PAL G T+++KP+E TP A
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
+ FA + G+P GV N+V G G T G +A + + VS TGS G ++M A A N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM-ATAAKN 244
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
+ V LELGGK+P ++ DD D+ A + + N G++C + RVYVQ+GIYD+F +
Sbjct: 245 ITKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 323 LVEKAKAWVVGDPFDPA-VRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXX 381
L E +A G+P + + GP ++ +R+ + EGA +
Sbjct: 305 LGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYY 364
Query: 382 XEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 441
PT+ +V ++M I E FGPV+ ++ F T+E+AI AN++ YGL + I T++LNVA
Sbjct: 365 YPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAM 424
Query: 442 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
+ ++ G +IN + G++ SG G G LH YLQ + V
Sbjct: 425 KAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 239/471 (50%), Gaps = 6/471 (1%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
++I+G+FV + ++P T I+RI +G ED A+ AA +A W
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERA--QPEWEALPAI 66
Query: 84 ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER + K + GK+ A++ ++ A+ + Y A A + GE
Sbjct: 67 ERASWLRKISAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGE 125
Query: 144 VLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+++ R + L + +GV I+PWNFP + K++PAL G T+++KP+E TP A
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
+ FA + G+P GV N+V G G T G +A + + VS TGS G ++M A A N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM-ATAAKN 244
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
+ V LELGGK+P ++ DD D+ A + + N G++C + RVYVQ+GIYD+F +
Sbjct: 245 ITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 323 LVEKAKAWVVGDPFDPA-VRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXX 381
L E +A G+P + + GP ++ +R+ + EGA +
Sbjct: 305 LGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYY 364
Query: 382 XEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 441
PT+ +V ++M I E FGPV+ ++ F T+E+AI AN++ YGL + I T++LNVA
Sbjct: 365 YPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAM 424
Query: 442 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
+ ++ G +IN + G++ SG G G LH YLQ + V
Sbjct: 425 KAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 165/476 (34%), Positives = 251/476 (52%), Gaps = 11/476 (2%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
T F+ G ++ + + TF DP +G A+ +A+ + AV+AA +AF W S
Sbjct: 13 TDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 82 GAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
ER ++ K+ + GK A G+I +A L +++ A +++
Sbjct: 69 AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVY 127
Query: 142 GEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
G+++ ++ + L++PIGV I PWNFP+ M KV ALAAGCT++VKPAE TP
Sbjct: 128 GDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPF 187
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTA---GAAIASHMDIDKVSFTGSTDVGRQVMQA 257
AL A LA AG+P GV NV+P A G AI + + K+SFTGST G+ ++
Sbjct: 188 SALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
AA S +K VS+ELGG +P ++FD +V+ A A+ N G+ V S++ VQ GI+D
Sbjct: 248 AANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQRGIHD 306
Query: 318 EFEKKLVEKAKAWV-VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
F K E K + VG+ F+ QGP +++K +++ + +GAT++T
Sbjct: 307 AFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ 366
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
EPT+ NVT+DML E FGP+ ++KF T EEAI AN GLA ++D
Sbjct: 367 LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQD 426
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
V+ + G++ +N +CP+GG K SG GR+ + YL++K V
Sbjct: 427 PAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 482
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 152/471 (32%), Positives = 239/471 (50%), Gaps = 8/471 (1%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFD-HGPWPRFSGA 83
+I G + DS G TF+ +P TG IA++ +EDV AV+A + A PWP +
Sbjct: 15 YIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWPIET-- 72
Query: 84 ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
RR + D GK A+ G++ AA Y A +
Sbjct: 73 -RRKWLEDIRDGLKENREEIGRILCXEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSH 130
Query: 144 VLKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+ +T+ P+GV G I+PWNFP K+S ALAAGC ++KPA +TPL
Sbjct: 131 TIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPLTX 190
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
+ F + +PDG +N+V G G + H D+ +SFTGST+VGR+++ A
Sbjct: 191 IAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTA-EQ 249
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
+K ++LELGG +P ++FDD D+ AAD + G+ CV ++R++V E + D F +K
Sbjct: 250 VKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQK 309
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXX- 381
L E+ VGD + + GP ++K+ FD++ +++ +GA+L+
Sbjct: 310 LAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLF 369
Query: 382 XEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 441
PT+ V + + E FGP++ F+T EE I + N+T +GLA+ + T D A
Sbjct: 370 FPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTADAERAQ 429
Query: 442 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
V+ +R G + N + P+GG K SG GR+ GLE L +++ ++V
Sbjct: 430 RVAAGLRFGHVGWNTGTGPTPEAPFGGXKASGIGREGGLEGLFEFVEAQTV 480
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 221 bits (562), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 150/480 (31%), Positives = 241/480 (50%), Gaps = 18/480 (3%)
Query: 24 LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
L INGE V + ++ +P R + + +++ +++ + A+++A +AF W +
Sbjct: 40 LIINGERV--TTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNP 95
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKM-GDIPGAANTLRYYAGAADKIH 141
ER I++K A GK W + D A + L YYA +++
Sbjct: 96 EERANILVKAAAIIRRRKHEFSAWLVHEAGK--PWKEADADTAEAIDFLEYYARQMIELN 153
Query: 142 GEVLKMSR-ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
+SR Q P+GV I PWNF + + G T+++KPA TP+
Sbjct: 154 RGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPV 213
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
+A F + + AG+P GV+N VPG G G + H ++FTGS DVG ++ + AA
Sbjct: 214 VAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAV 273
Query: 261 -----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
++LK V +E+GGK +++ D D++ AA+ L+ G+ C A SR + + +
Sbjct: 274 VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDV 333
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXX 375
YDE +K V AK VGDP + GP +D+K F++I+SYIE GK+EG L+T
Sbjct: 334 YDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGD 392
Query: 376 XXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435
+PTI ++ + +I + EIFGPV+A K + A++ ANNT YGL ++T+
Sbjct: 393 SSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITR 452
Query: 436 DLNVANTVSRSIRAGIIWI--NCYFAFDSDCPYGGYKMSGF-GRDCGLESLHNYLQVKSV 492
+ R G ++ NC A P+GG+KMSG + G + L ++Q K+V
Sbjct: 453 NRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTV 512
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 159/491 (32%), Positives = 243/491 (49%), Gaps = 17/491 (3%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
EI+ K +INGE+V+S + + + ++P T E + ++ KED+D A + A +AF W
Sbjct: 2 EIRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TW 59
Query: 78 PRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAA 137
+ + R I+ F GK ++ +G++ + + AGA
Sbjct: 60 SKVAVPRRARILFNFQQLLSQHKEELAHLITIENGK-NTKEALGEVGRGIENVEFAAGAP 118
Query: 138 DKIHGEVL-KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
+ G+ L ++ ++ R PIGVVG I P+NFP + A+A G T I+KP+E
Sbjct: 119 SLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSE 178
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
+TPL+ L + AG+P GV NVV G I H +I +SF GS VG V +
Sbjct: 179 RTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNG-ILEHPEIKAISFVGSKPVGEYVYK 237
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
+ NLK V G K+ ++ +D ++ + + GE C+A + V V+EGI
Sbjct: 238 KG-SENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIA 296
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTX-XXXX 375
DEF KL EK +G+ D V GP + + R LSYIE G EGA L+
Sbjct: 297 DEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENV 356
Query: 376 XXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435
PTIF NVT +M I K+EIF PV+++++ K ++EAI+ AN + + A + T
Sbjct: 357 SDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTS 416
Query: 436 DLNVANTVSRSIRAGIIWIN----CYFAFDSDCPYGGYKMSGFG--RDCGLESLHNYLQV 489
+ N +I AG++ IN AF P+ G+K S FG G +S+ Y +
Sbjct: 417 NSNAIRYFRENIDAGMLGINLGVPAPMAF---FPFSGWKSSFFGTLHANGKDSVDFYTR- 472
Query: 490 KSVVTPIFNSP 500
K VVT + +P
Sbjct: 473 KKVVTARYPAP 483
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/465 (33%), Positives = 233/465 (50%), Gaps = 10/465 (2%)
Query: 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP 78
I TK I G++V+ S + I+P IA + DVD A +AA++A W
Sbjct: 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKA--QAEWA 67
Query: 79 RFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAAD 138
AER I+ + A+ G S A + +I A N + A
Sbjct: 68 ATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPG 126
Query: 139 KIHGEVLKMSR-ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
++HG + + + R GVVG I PWNFP + V+PALA G +++KPA
Sbjct: 127 RVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASD 186
Query: 198 TPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
TP+ + A + + AGVP GV++ V G G G +H +SFTGST VGR+V +
Sbjct: 187 TPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGE 246
Query: 257 AAATSN-LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
A +K V+LELGG +P ++ D D++ AA A +G ++G+IC++ +RV V +
Sbjct: 247 LAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAV 306
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXX 375
+DEF +K VE K GDP GP ++ Q + IE K+EGAT+
Sbjct: 307 HDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATV---QVEG 363
Query: 376 XXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435
P +F++VT DM IA+ EIFGP+++++K A + AN + +GL+A + +K
Sbjct: 364 PIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSK 423
Query: 436 DLNVANTVSRSIRAGIIWINCYFAFDS-DCPYGGYKMSGFGRDCG 479
D++ A + I +G++ IN D +GG K SG GR G
Sbjct: 424 DIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNG 468
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 207 bits (528), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 139/475 (29%), Positives = 231/475 (48%), Gaps = 20/475 (4%)
Query: 34 VSGKTFET------IDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERR 86
+ G+ +ET I+P E + +++ ++ + A++AA +AF+ W ER
Sbjct: 42 IDGERYETENKIVSINPANKEEVVGTVSKATQDHAEKAIQAAAKAFE--TWRYTDPEERA 99
Query: 87 GIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKI-HGEVL 145
++ + GK + A D A + + YYA ++ G+ +
Sbjct: 100 AVLFRAVAKVRRKKHEFSALLVKEAGKPWNEAD-ADTAEAIDFMEYYARQMIELAKGKPV 158
Query: 146 KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 205
+ + P GV I PWNF + + G T+++KPA P+IA F
Sbjct: 159 NSREGERNQYVYTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKF 218
Query: 206 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA-----T 260
+ + +G+P GV+N VPG G G + H ++FTGS +VG ++ + AA
Sbjct: 219 VEVLEESGLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQ 278
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
++LK V E+GGK +++ +D D+ AA G+ C A SR V E +YDE
Sbjct: 279 THLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVL 338
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXX 380
K+++E ++ VG+P V GP +D+ F++I+ YIE GK EG L++
Sbjct: 339 KRVIEITESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEG-RLVSGGKGDDSKGY 397
Query: 381 XXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 440
EPTIF ++ + + EIFGPV+A K + +EA++ ANNT YGL ++TK+ +
Sbjct: 398 FIEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHI 457
Query: 441 NTVSRSIRAGIIWI--NCYFAFDSDCPYGGYKMSGF-GRDCGLESLHNYLQVKSV 492
N + G ++ NC A P+GG+KMSG + G + L ++Q K++
Sbjct: 458 NRAKQEFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTI 512
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 149/484 (30%), Positives = 225/484 (46%), Gaps = 19/484 (3%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
K K ++NGE+ +S + +P +G + + E+VD +A++A W
Sbjct: 3 KQYKNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRA 58
Query: 80 FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
S ER + K AD K + A + ++ A + Y A +
Sbjct: 59 LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR 117
Query: 140 IHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
+ GEVL+ S+ REP+G+V I P+N+P + K++PAL AG + K
Sbjct: 118 MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFK 177
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
P Q + L A AG+P GV N + G G G I H ++ ++FTGST +G +
Sbjct: 178 PPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ + A ++P+ LELGGK ++ +D D+ A + G G+ C A RV V E
Sbjct: 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
+ DE +K+ EK A +G+P D A P +D K D + I +GAT LT
Sbjct: 295 SVADELVEKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIK 353
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
P +F VT DM +A E FGPV+ +++ +VEEAI+ +N + YGL A I
Sbjct: 354 REGNLIC---PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDC-PYGGYKMSGFGRDCGLESLHNYLQVKSV 492
T D A ++ + G + IN +D P+ G K SG G S+ VKSV
Sbjct: 411 TNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSV 470
Query: 493 VTPI 496
V I
Sbjct: 471 VFDI 474
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 148/484 (30%), Positives = 225/484 (46%), Gaps = 19/484 (3%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
K K ++NGE+ +S + +P +G + + E+VD +A++A W
Sbjct: 3 KQYKNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRA 58
Query: 80 FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
S ER + K AD K + A + ++ A + Y A +
Sbjct: 59 LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR 117
Query: 140 IHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
+ GEVL+ S+ REP+G+V I P+N+P + K++PAL AG + K
Sbjct: 118 MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFK 177
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
P Q + L A AG+P GV N + G G G I H ++ ++F+GST +G +
Sbjct: 178 PPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGER 237
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ + A ++P+ LELGGK ++ +D D+ A + G G+ C A RV V E
Sbjct: 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
+ DE +K+ EK A +G+P D A P +D K D + I +GAT LT
Sbjct: 295 SVADELVEKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIK 353
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
P +F VT DM +A E FGPV+ +++ +VEEAI+ +N + YGL A I
Sbjct: 354 REGNLIC---PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDC-PYGGYKMSGFGRDCGLESLHNYLQVKSV 492
T D A ++ + G + IN +D P+ G K SG G S+ VKSV
Sbjct: 411 TNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSV 470
Query: 493 VTPI 496
V I
Sbjct: 471 VFDI 474
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 148/484 (30%), Positives = 224/484 (46%), Gaps = 19/484 (3%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
K K ++NGE+ +S + +P +G + + E+VD +A++A W
Sbjct: 3 KQYKNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRA 58
Query: 80 FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
S ER + K AD K + A + ++ A + Y A +
Sbjct: 59 LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR 117
Query: 140 IHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
+ GEVL+ S+ REP+G+V I P+N+P + K++PAL AG + K
Sbjct: 118 MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFK 177
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
P Q + L A AG+P GV N + G G G I H ++ ++FTGST +G +
Sbjct: 178 PPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ + A ++P+ L LGGK ++ +D D+ A + G G+ C A RV V E
Sbjct: 238 IGKMAG---MRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
+ DE +K+ EK A +G+P D A P +D K D + I +GAT LT
Sbjct: 295 SVADELVEKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIK 353
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
P +F VT DM +A E FGPV+ +++ +VEEAI+ +N + YGL A I
Sbjct: 354 REGNLIC---PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDC-PYGGYKMSGFGRDCGLESLHNYLQVKSV 492
T D A ++ + G + IN +D P+ G K SG G S+ VKSV
Sbjct: 411 TNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSV 470
Query: 493 VTPI 496
V I
Sbjct: 471 VFDI 474
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 201 bits (511), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 148/484 (30%), Positives = 224/484 (46%), Gaps = 19/484 (3%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
K K ++NGE+ +S + +P +G + + E+VD +A++A W
Sbjct: 3 KQYKNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRA 58
Query: 80 FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
S ER + K AD K + A + ++ A + Y A +
Sbjct: 59 LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR 117
Query: 140 IHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
+ GEVL+ S+ REP+G+V I P+N+P + K++PAL AG + K
Sbjct: 118 MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFK 177
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
P Q + L A AG+P GV N + G G G I H ++ ++FTGST +G +
Sbjct: 178 PPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ + A ++P+ LELGGK ++ +D D+ A + G G+ A RV V E
Sbjct: 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVME 294
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
+ DE +K+ EK A +G+P D A P +D K D + I +GAT LT
Sbjct: 295 SVADELVEKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIK 353
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433
P +F VT DM +A E FGPV+ +++ +VEEAI+ +N + YGL A I
Sbjct: 354 REGNLIC---PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDC-PYGGYKMSGFGRDCGLESLHNYLQVKSV 492
T D A ++ + G + IN +D P+ G K SG G S+ VKSV
Sbjct: 411 TNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSV 470
Query: 493 VTPI 496
V I
Sbjct: 471 VFDI 474
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 220/459 (47%), Gaps = 17/459 (3%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
+ NGE+V+S +G+ P +G A+ I +E+V+ A++ A+ A W
Sbjct: 14 ILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDA--QKIWKIRPIH 71
Query: 84 ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER ++ +AD K A +G++ A+ +R+ A A +++GE
Sbjct: 72 ERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSA-IGEVSRTADIIRHTADEALRLNGE 130
Query: 144 VLKMSRALQGYTL------REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
LK + G + REP+GVV I P+N+P + K++PAL G T++ KPA Q
Sbjct: 131 TLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQ 190
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
L + AG P+G++ VV G G G + H ID ++FTG T G ++ +
Sbjct: 191 GSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEK 250
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
A + PV LELGGK P ++ DD D+ A + G G+ C A RV+VQ+ + D
Sbjct: 251 A---KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVAD 307
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXX 377
+ + E + VG P D A P +D+K I I+ GATLL+
Sbjct: 308 QLVANIKELVEQLTVGSPEDDA-DITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGN 366
Query: 378 XXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
PT+ +VT M +A E FGPV+ +++ K EAI +N + YGL A I TKD
Sbjct: 367 LLS---PTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDT 423
Query: 438 NVANTVSRSIRAGIIWINCYFAFDSDC-PYGGYKMSGFG 475
+ A + + + G + IN D P+ G K SG G
Sbjct: 424 DRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLG 462
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 227/471 (48%), Gaps = 33/471 (7%)
Query: 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAI--ARIAEGDK-EDV-DLAVKAARQAFDHGP 76
K FING++ SG+T + ++P I A +A G + ED D+A KA ++
Sbjct: 6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKE------ 59
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGK--LHSWAKMGDIPGAANTLRYYA 134
W + + +R+ ++ K G + S ++ + Y
Sbjct: 60 WAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYT 119
Query: 135 GAADKIHGEVLKMSRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191
G G V ++ ++G T R P+GV+ I P+NFP + ++PA+A G +++
Sbjct: 120 GEL----GGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVV 175
Query: 192 VKPAEQTPL-----IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
KP QT + IA F H AG+P GVLNV+ G + ++ +SFTG
Sbjct: 176 HKPDIQTAISGGTIIAKAFEH----AGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTG 231
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
ST VGR + + A + K ++LELGG +P + D DV+ A D A+ G ++G+IC+
Sbjct: 232 STAVGRHIGEIAGRA-FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMII 290
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA 366
+R+ V + +YDEF +K + K GD DP GP ++++Q ++ L IE K +G
Sbjct: 291 NRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGI 350
Query: 367 TLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRY 426
L P +F + IA+ E+F P+ ++K + +EAI AN+T Y
Sbjct: 351 ELAVEGKRVGNVLT---PYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEY 407
Query: 427 GLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDS-DCPYGGYKMSGFGR 476
GL++ + T DL + I +G+ +N DS + +GG K SG GR
Sbjct: 408 GLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGR 458
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 229/478 (47%), Gaps = 26/478 (5%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAA---RQAFDHGPWPRF 80
+FI+G++++ + + I+P + E I +I +E+ A+ A ++ + P +
Sbjct: 2 MFIDGKWINR---EDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITK- 57
Query: 81 SGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
R I++ A GK A++ ++ + T + A +
Sbjct: 58 ----RYNILMNIAKQIKEKKEELAKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEH 112
Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
EV+ L +T REP+G+VG I P+NFP + K++PA+A G ++ P+ + PL
Sbjct: 113 RDEVIPSDDRLI-FTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPL 171
Query: 201 IALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
+ + A + + A VP GV N++ G G G I + ++ +SFTGS+ VG + +
Sbjct: 172 VCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITK 231
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
A K ++LELGG +P ++ D D+N A + + G G++C++ + V E I
Sbjct: 232 KAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIA 288
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
D+F + V KAK VG+P D GP + + + + +E EG LL
Sbjct: 289 DKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK 348
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 436
PTI V D ++ K E F PV+ +++ EE I AN+T YGL + I T D
Sbjct: 349 ALFY---PTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTND 403
Query: 437 LNVANTVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
+N + + ++ G + IN F D P+GG K SG GR+ ++ +K+++
Sbjct: 404 INKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTII 461
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 216/470 (45%), Gaps = 29/470 (6%)
Query: 35 SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFAD 94
SG+ + P E IAR+ + + + V+ R+A+ W +R I+ + D
Sbjct: 33 SGEVITSYCPANNEPIARVTQATLAEYEETVQKTREAWKM--WADIPAPKRGEIVRQIGD 90
Query: 95 XXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGY 154
GK++ +G++ + Y G + I G VL R G+
Sbjct: 91 ALRKKIKVLGSLVSLEMGKIYV-EGVGEVQEYVDVCDYAVGLSRMIGGPVLPSERP--GH 147
Query: 155 TLRE---PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL----YFAH 207
L E P+G+VG I +NFP ++ + AL G + K A TPL ++ A
Sbjct: 148 ALIEQWNPVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAE 207
Query: 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 267
+ + +P + ++ G G G A+A +D +SFTGST VG+ V + +
Sbjct: 208 VLEQNNLPGAICSMTCG-GADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKL- 265
Query: 268 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327
LELGG + +++F+D D+N A+ + G+ C + R+ + E ++D +++ +
Sbjct: 266 LELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHESVHDAVVERIAKAY 325
Query: 328 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIF 387
K +GDP+DP+ GP K+ D+ L+ IE K++G TL+ EPTI
Sbjct: 326 KQVRIGDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRPGNYVEPTII 385
Query: 388 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 447
T + D I E F P++ ++KFKT EEA N + GL++ I TKDL R
Sbjct: 386 TGLAHDAPIVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKDL------GRVF 439
Query: 448 R--------AGIIWINC-YFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 488
R GI+ +N + +GG K +G GR+ G +S Y++
Sbjct: 440 RWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQYMR 489
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 186/368 (50%), Gaps = 13/368 (3%)
Query: 122 DIPGAANTLRYYAGAADKIHGEVLKMSRA---LQGYTLREPIGVVGHIIPWNFPTTMFFM 178
D+ A + L YYA ++ G+ ++ A L Y EP GV I PWNFP +
Sbjct: 628 DVTEAIDFLEYYAREMIRL-GQPQRVGHAPGELNHY-FYEPKGVAAVIAPWNFPLAISMG 685
Query: 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMD 238
S A+ G ++ KP+ T +I + L + AG+P+GV N PG G G + H D
Sbjct: 686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPD 745
Query: 239 IDKVSFTGSTDVGRQVMQAAA-----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 293
I ++FTGS + G ++++ AA +N+K + E+GGK+ ++I DD D++ A L
Sbjct: 746 ISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLY 805
Query: 294 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 353
+G+ C A SRV V + +YD+F ++LV AKA VG DPA G D K
Sbjct: 806 SAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKS 865
Query: 354 ILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT 413
I Y E GKREG L TI + + IA+ EIFGPV+A+M+ K
Sbjct: 866 IKEYAEIGKREGHVLYESPVPAGEGYFVPM-TIIGGIKPEHRIAQEEIFGPVLAVMRAKD 924
Query: 414 VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI--NCYFAFDSDCPYGGYKM 471
++AI+ AN+T++ L GI ++ R R G ++I N A P+GG +M
Sbjct: 925 FDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARM 984
Query: 472 SGFGRDCG 479
SG G G
Sbjct: 985 SGVGTKAG 992
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 209/427 (48%), Gaps = 15/427 (3%)
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKM-GDIPGAANTLRYYAG 135
W + +R ++LK A GK +W + D+ A + + YYA
Sbjct: 90 WKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGK--NWVEASADVAEAIDFIEYYAR 147
Query: 136 AADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AA + +++ + P+G I PWNFP +F + +A G T+I K
Sbjct: 148 AALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAK 207
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
PAE ++ + AG P GV+N +PG G GA + H I ++FTGS +VG +
Sbjct: 208 PAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267
Query: 254 VMQAA-----ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR 308
+ +AA + K +E GGK+ +++ + D + AA+ ++ +G+ C A+SR
Sbjct: 268 IYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASR 327
Query: 309 VYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 368
+ + +G Y+ ++++++A+ VG P + GP V +Q ++LSYIE GK EG +
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV 386
Query: 369 LTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL 428
L PT+FT V IA+ EIFGPV+++++ K EA++ AN+T YGL
Sbjct: 387 LGGKRLEGEGYFIA-PTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGL 445
Query: 429 AAGIMTKDLNVANTVSRSIRAGIIWINCYF--AFDSDCPYGGYKMSGFGRDCG-LESLHN 485
G+ ++ R G ++ N A P+GG+K+SG G L+ L
Sbjct: 446 TGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRL 505
Query: 486 YLQVKSV 492
+L++K+V
Sbjct: 506 FLEMKAV 512
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 208/427 (48%), Gaps = 15/427 (3%)
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKM-GDIPGAANTLRYYAG 135
W + +R ++LK A GK +W + D+ A + + YYA
Sbjct: 90 WKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGK--NWVEASADVAEAIDFIEYYAR 147
Query: 136 AADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AA + +++ + P+G I PWNFP +F + +A G T+I K
Sbjct: 148 AALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAK 207
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
PAE ++ + AG P GV+N +PG G GA + H I ++FTGS +VG +
Sbjct: 208 PAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267
Query: 254 VMQAA-----ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR 308
+ +AA + K +E GGK +++ + D + AA+ ++ +G+ C A+SR
Sbjct: 268 IYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASR 327
Query: 309 VYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 368
+ + +G Y+ ++++++A+ VG P + GP V +Q ++LSYIE GK EG +
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV 386
Query: 369 LTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL 428
L PT+FT V IA+ EIFGPV+++++ K EA++ AN+T YGL
Sbjct: 387 LGGKRLEGEGYFIA-PTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGL 445
Query: 429 AAGIMTKDLNVANTVSRSIRAGIIWINCYF--AFDSDCPYGGYKMSGFGRDCG-LESLHN 485
G+ ++ R G ++ N A P+GG+K+SG G L+ L
Sbjct: 446 TGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRL 505
Query: 486 YLQVKSV 492
+L++K+V
Sbjct: 506 FLEMKAV 512
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 207/427 (48%), Gaps = 15/427 (3%)
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKM-GDIPGAANTLRYYAG 135
W + +R ++LK A GK +W + D+ A + + YYA
Sbjct: 90 WKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGK--NWVEASADVAEAIDFIEYYAR 147
Query: 136 AADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AA + +++ + P+G I PWNFP +F + +A G T+I K
Sbjct: 148 AALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAK 207
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
PAE ++ + AG P GV+N +PG G GA + H I ++FTGS +VG +
Sbjct: 208 PAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267
Query: 254 VMQAA-----ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR 308
+ +AA + K +E GGK +++ + D + AA+ ++ +G+ A+SR
Sbjct: 268 IYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASR 327
Query: 309 VYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 368
+ + +G Y+ ++++++A+ VG P + GP V +Q ++LSYIE GK EG +
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV 386
Query: 369 LTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL 428
L PT+FT V IA+ EIFGPV+++++ K EA++ AN+T YGL
Sbjct: 387 LGGKRLEGEGYFIA-PTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGL 445
Query: 429 AAGIMTKDLNVANTVSRSIRAGIIWINCYF--AFDSDCPYGGYKMSGFGRDCG-LESLHN 485
G+ ++ R G ++ N A P+GG+K+SG G L+ L
Sbjct: 446 TGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRL 505
Query: 486 YLQVKSV 492
+L++K+V
Sbjct: 506 FLEMKAV 512
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 213/472 (45%), Gaps = 35/472 (7%)
Query: 36 GKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADX 95
G+ T P E IAR+ + D + VK AR+A+ W +R I+ + D
Sbjct: 36 GEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDA 93
Query: 96 XXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYT 155
GK+ +G++ + Y G + I G +L R+ G+
Sbjct: 94 LREKIQVLGSLVSLEMGKILV-EGVGEVQEYVDICDYAVGLSRMIGGPILPSERS--GHA 150
Query: 156 LRE---PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL----YFAHL 208
L E P+G+VG I +NFP ++ + A+ G + K A T LI++ A +
Sbjct: 151 LIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKV 210
Query: 209 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV---MQAAATSNLKP 265
+ +P + ++ G G G A+A ++ +SFTGST VG+QV +Q +L
Sbjct: 211 LEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSL-- 267
Query: 266 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 325
LELGG + ++ F+D D++ AL + G+ C + R+++ E I+DE +L +
Sbjct: 268 --LELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKK 325
Query: 326 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPT 385
VG+P+DP V GP K+ L +E K+EG T++ EPT
Sbjct: 326 AYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPT 385
Query: 386 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 445
I T + D IA E F P++ + KF+ EE N + GL++ I TKDL R
Sbjct: 386 IVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDL------GR 439
Query: 446 SIR--------AGIIWINC-YFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 488
R GI+ +N + +GG K +G GR+ G ++ Y++
Sbjct: 440 IFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMR 491
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 197/445 (44%), Gaps = 17/445 (3%)
Query: 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXX 98
+++++P T EA A + +D A+ A + W A R I+ A+
Sbjct: 6 YQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALKE 63
Query: 99 XXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG-EVLKMSRAL----QG 153
GKL S +K ++ + YYA HG E LK ++
Sbjct: 64 HEDELAKXXTLEXGKLLSESKE-EVELCVSICNYYAD-----HGPEXLKPTKLNSDLGNA 117
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
Y L++ GV+ PWNFP +P G +++K A P A A + K AG
Sbjct: 118 YYLKQSTGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAG 177
Query: 214 VPDGVL-NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
P+G L N+ P + A I + I V+ TGS G V +AA NLK + ELGG
Sbjct: 178 APEGSLINLYPSYDQLAD--IIADPRIQGVALTGSERGGSAVAEAAG-KNLKKSTXELGG 234
Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
++ DD D ++ +N G++C +S R+ V++ YDE +L
Sbjct: 235 NDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKA 294
Query: 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTE 392
GDP + P +K +++ + ++ GA + PTI T++ +
Sbjct: 295 GDPLEADTTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAK 354
Query: 393 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 452
D + E+FGP+ + + AI+ AN++ YGL + ++ D++ A VS I G
Sbjct: 355 DNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGXT 414
Query: 453 WINCYFAFDSDCPYGGYKMSGFGRD 477
IN + + P+GG K SG+GR+
Sbjct: 415 VINGRWITSGELPFGGIKKSGYGRE 439
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 190/452 (42%), Gaps = 5/452 (1%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXX 100
+++P TG+ +A + ++++ A+ A F W S A+R +
Sbjct: 11 SVNPATGQTLAAXPWANAQEIEHALSLAASGFKK--WKXTSVAQRAQTLRDIGQALRAHA 68
Query: 101 XXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
GK A+ ++ +A +YA + Q P+
Sbjct: 69 EEXAQCITREXGKPIKQAR-AEVTKSAALCDWYAEHGPAXLNPEPTLVENQQAVIEYRPL 127
Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
GV+ I PWNFP P L AG + ++K A A A + AG P GV
Sbjct: 128 GVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGVYG 187
Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
V I + I V+ TGS + A A + LK LELGG P ++ +
Sbjct: 188 WVNANNEGVSQXI-NDPRIAAVTVTGSVRA-GAAIGAQAGAALKKCVLELGGSDPFIVLN 245
Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
D D+ A A+ G N G++C A+ R V+EGI F + V A A GDP
Sbjct: 246 DADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEEN 305
Query: 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNE 400
GP D + ++ EGA LL T+ +VT D + E
Sbjct: 306 DLGPXARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDXTAFRQE 365
Query: 401 IFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF 460
+FGPV A+ K A+ AN++ +GL+A I T D +A + + G ++IN Y A
Sbjct: 366 LFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEXAARLECGGVFINGYSAS 425
Query: 461 DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
D+ +GG K SGFGR+ LH + V++V
Sbjct: 426 DARVAFGGVKKSGFGRELSHFGLHEFCNVQTV 457
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 207/460 (45%), Gaps = 33/460 (7%)
Query: 35 SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP--RFSGAERRGIMLKF 92
SG+ E P IA++ +E+V+ + F G W G ER ++ K
Sbjct: 30 SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 93 ADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM----- 147
AD GK S A +G++ A + LR KI G+ +
Sbjct: 87 ADIIERNLDVFAEVLVMNAGKPKS-AAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 148 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 207
+ +G REP+GVV I P+N+P K++ + G ++VKP+ PL A
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 267
AG P + ++ G A +A + VSFTGST+VG +V++ +K
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADDR-VAAVSFTGSTEVGERVVK---VGGVKQYV 261
Query: 268 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327
+ELGG P ++ +D D++ AAD GI G+ C A V + +Y + +++ ++
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 321
Query: 328 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIF 387
+ VGDP DP V GP + D +++ IE +G +L +PT+
Sbjct: 322 SSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLA--GGRRLGPTYVQPTLV 379
Query: 388 ---TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 444
+ +DM++ K E+F PV + ++ K +++AI+ AN YGL A + +D+
Sbjct: 380 EAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAV 439
Query: 445 RSIRAGIIWIN-------CYFAFDSDCPYGGYKMSGFGRD 477
R + G I+IN Y+ P+GG K SG R+
Sbjct: 440 RLLEVGAIYINDMPRHGIGYY------PFGGRKKSGVFRE 473
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 167/351 (47%), Gaps = 14/351 (3%)
Query: 159 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD-- 216
P +VG I PWNFP T+ + PAL AGC ++VKP+E P L L VP+
Sbjct: 126 PYPLVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIAPRFVAPL--LXALNTVPELR 183
Query: 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276
VL V G G T GA + +++D V FTGS GR+V + AA P LELGGK P
Sbjct: 184 DVLIFVEGGGET-GANLINYVDF--VCFTGSVATGREVAETAA-RRFIPAYLELGGKDPA 239
Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336
++ + ++ A L G + N G+ C++ R+YV E ++EF +L+ KA + P
Sbjct: 240 IVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPL 299
Query: 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATL-LTXXXXXXXXXXXXEPTIFTNVTEDML 395
GP + +KQ I +I +GA + PT+ TNV
Sbjct: 300 VEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVXTNVNHSXK 359
Query: 396 IAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN 455
+ E FGP+ + F VEEA+ AN+T YGL+A + + A V+R + AG I IN
Sbjct: 360 VXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISIN 419
Query: 456 --CYFAFDSDCPYGGYKMSGF-GRDCGLESLHNYLQVKS--VVTPIFNSPW 501
A + + SG G G L +L+ ++ + T + PW
Sbjct: 420 DAALTAXXHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPW 470
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 206/460 (44%), Gaps = 33/460 (7%)
Query: 35 SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP--RFSGAERRGIMLKF 92
SG+ E P IA++ +E+V+ + F G W G ER ++ K
Sbjct: 30 SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 93 ADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM----- 147
AD GK S A +G++ A + LR KI G+ +
Sbjct: 87 ADIIERNLDVFAEVLVMNAGKPKS-AAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 148 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 207
+ +G REP+GVV I P+N+P K++ + G ++VKP+ PL A
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 267
AG P + ++ G A +A + VSFTGST+VG +V++ +K
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADDR-VAAVSFTGSTEVGERVVK---VGGVKQYV 261
Query: 268 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327
+ELGG P ++ +D D++ AAD GI G+ C A V + +Y + +++ ++
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 321
Query: 328 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIF 387
+ VGDP DP V GP + D +++ IE +G +L +PT+
Sbjct: 322 SSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLA--GGRRLGPTYVQPTLV 379
Query: 388 ---TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 444
+ +DM++ K E+F PV ++ K +++AI+ AN YGL A + +D+
Sbjct: 380 EAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAV 439
Query: 445 RSIRAGIIWIN-------CYFAFDSDCPYGGYKMSGFGRD 477
R + G I+IN Y+ P+GG K SG R+
Sbjct: 440 RLLEVGAIYINDMPRHGIGYY------PFGGRKKSGVFRE 473
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 148/483 (30%), Positives = 215/483 (44%), Gaps = 22/483 (4%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
FI+G+ V SG+ +P TGE +A D DLA W +
Sbjct: 30 FIDGKRVAGTSGRVSNIFNPATGEVQGTVAL--ASDADLAAAVESAKAAQPKWAATNPQR 87
Query: 85 RRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R + KF GK AK GDI + G E
Sbjct: 88 RARVFXKFVQLLNDNXNELAEXLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKSEF 146
Query: 145 LK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+ + Y++R+P+G+ I P+NFP + +PA+A G I+KP+E+ P + +
Sbjct: 147 TEGAGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPI 206
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
A L AG+P G+LNVV G A AI +H DI VSF GST + R V AA N
Sbjct: 207 RLAELXIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAX-NG 264
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVA-SSRVYVQEGIYDEFEK 321
K G K+ +I D D++ AA+ AL+G + + GE C A S V V E +
Sbjct: 265 KRAQCFGGAKNHXIIXPDADLDQAAN-ALIGAGYGSAGERCXAISVAVPVGEETANRLID 323
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXX 381
KLV ++ +G D GP V K+ RI S I+ G +GA L+
Sbjct: 324 KLVPXVESLRIGPYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYE 383
Query: 382 XEPTI----FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437
I F +VT D I K EIFGPV+++++ + EEA+ YG I T+D
Sbjct: 384 NGHFIGGCLFDDVTPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDG 443
Query: 438 NVANTVSRSIRAGIIWIN----CYFAFDSDCPYGGYKMSGFG--RDCGLESLHNYLQVKS 491
+ A + I G + +N A+ S +GG+K S FG G +S+ + + K+
Sbjct: 444 DAARDFASRINIGXVGVNVPIPVPLAYHS---FGGWKSSSFGDLNQHGTDSIKFWTRTKT 500
Query: 492 VVT 494
+ +
Sbjct: 501 ITS 503
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 205/460 (44%), Gaps = 33/460 (7%)
Query: 35 SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP--RFSGAERRGIMLKF 92
SG+ E P IA++ +E+V+ + F G W G ER ++ K
Sbjct: 30 SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 93 ADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM----- 147
AD GK S A +G++ A + LR KI G+ +
Sbjct: 87 ADIIERNLDVFAEVLVMNAGKPKS-AAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 148 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 207
+ +G REP+GVV I P+N+P K++ + G ++VKP+ PL A
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 267
AG P + ++ G A +A + VSFTGST+VG +V++ +K
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADDR-VAAVSFTGSTEVGERVVK---VGGVKQYV 261
Query: 268 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327
+ELGG P ++ +D D++ AAD GI G+ C A V + +Y + +++ ++
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 321
Query: 328 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIF 387
+ VGDP DP V GP + D +++ IE +G +L +PT
Sbjct: 322 SSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLA--GGRRLGPTYVQPTFV 379
Query: 388 ---TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 444
+ +DM++ K E+F PV ++ K +++AI+ AN YGL A + +D+
Sbjct: 380 EAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAV 439
Query: 445 RSIRAGIIWIN-------CYFAFDSDCPYGGYKMSGFGRD 477
R + G I+IN Y+ P+GG K SG R+
Sbjct: 440 RLLEVGAIYINDMPRHGIGYY------PFGGRKKSGVFRE 473
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 201/457 (43%), Gaps = 13/457 (2%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEG-DKEDVDLAVKAARQAFDHGPWPRFSGA 83
+I G+++ G+T E++DP G+ + G D VD AV AAR+AF W R
Sbjct: 9 YIAGQWLAG-QGETLESLDP-VGQGVVWSGRGADATQVDAAVCAAREAFPA--WARRPLE 64
Query: 84 ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
+R ++ +FA GK W ++ N + A + GE
Sbjct: 65 QRIELLERFAATLKSRADELARVIGEETGK-PLWESATEVTSXVNKVAISVQAFRERTGE 123
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+P GVV P+NFP + + PAL AG ++ KP+E TP +A
Sbjct: 124 KSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAE 183
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
AG+P GVLN+V G G G A+A+H +D + FTGS+ G +
Sbjct: 184 LTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQ 242
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKK 322
K ++LE GG +PL++ + D++ A + + G+ C + R+ V +G + D +
Sbjct: 243 KILALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLAR 302
Query: 323 LVEKAKAWVVGDPFD--PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXX 380
LV + VG FD PA G + + +L EH +GA L
Sbjct: 303 LVAVSATLRVGR-FDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXTQPIDGAA 361
Query: 381 XXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 440
P I +V+ E FGP++ ++++ AI+ AN T+YGLAAG+++
Sbjct: 362 LLTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERF 420
Query: 441 NTVSRSIRAGII-WINCYFAFDSDCPYGGYKMSGFGR 476
RAGI+ W S P+GG SG R
Sbjct: 421 EQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHR 457
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 167/345 (48%), Gaps = 18/345 (5%)
Query: 152 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 211
+ Y ++EP GV I P+N+P + + A+ G T I+KP+E TP + +
Sbjct: 123 ECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAE 182
Query: 212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271
A P+ V V+ G G + + S + D + FTGS +VG+ VMQAAA +L PV LELG
Sbjct: 183 AFAPEYV-AVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELG 238
Query: 272 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331
GK PL++ D D++ + + G N G+ C+A +YV + D ++LVE+ K +
Sbjct: 239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHYSVKDALLERLVERVKTEL 298
Query: 332 VGDPFDPAVRQ-GPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNV 390
P + G V ++Q R++S +E +G L+ T+ V
Sbjct: 299 ------PEINSTGKLVTERQVQRLVSLLE--ATQGQVLVGSQADVSKRALSA--TVVDGV 348
Query: 391 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR-YGLAAGIMTKDLNVANTVSRSIRA 449
+ + E+FGP++ +++F +V AI N LA + KD++VA + I++
Sbjct: 349 EWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQS 408
Query: 450 GIIWIN--CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
G +N AF P+GG SG G G S + KSV
Sbjct: 409 GDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 175/372 (47%), Gaps = 22/372 (5%)
Query: 120 MGDIPGAANTLRYYAGAADKIHGEVLKM------SRALQGYTLREPIGVVGHIIPWNFPT 173
+ ++ AA+ RYYA K+ G M S AL T+R GV I PWNFP
Sbjct: 608 LSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNAL---TMRGR-GVFVAISPWNFPL 663
Query: 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAI 233
+F +V+ AL AG +++ KPAEQTP IA L AG+P L +V G G GAA+
Sbjct: 664 AIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDG-RIGAAL 722
Query: 234 ASHMDIDKVSFTGSTDVGRQVMQAAATSN--LKPVSLELGGKSPLLIFDDVDVNTAADMA 291
+H DI V FTGST+V R + +A A + + P+ E GG + ++ AD
Sbjct: 723 TAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDV 782
Query: 292 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQF 351
+ + G+ C A ++VQE + D + + A+ +GDP D A GP +D +
Sbjct: 783 VTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAK 842
Query: 352 DRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
R+ ++I K E P IF L E+FGP++ ++++
Sbjct: 843 QRLDAHIARMKTEARLHFAGPAPEGCFVA---PHIFELTEAGQLT--EEVFGPILHVVRY 897
Query: 412 K--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF--AFDSDCPYG 467
+ +E +++ T YGL G+ ++ + + ++ G I++N A P+G
Sbjct: 898 RPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFG 957
Query: 468 GYKMSGFGRDCG 479
G +SG G G
Sbjct: 958 GNGLSGTGPKAG 969
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 165/343 (48%), Gaps = 18/343 (5%)
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
Y ++EP GV I P+N+P + + A+ G T I+KP+E TP + + A
Sbjct: 125 YVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAF 184
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
P+ V V+ G G + + S + D + FTGS +VG+ VMQAAA +L PV LELGGK
Sbjct: 185 APEYV-AVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELGGK 240
Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
PL++ D D++ + + G N G+ +A +YV + D ++LVE+ K +
Sbjct: 241 CPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL-- 298
Query: 334 DPFDPAVRQ-GPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTE 392
P + G V ++Q R++S +E +G L+ T+ V
Sbjct: 299 ----PEINSTGKLVTERQVQRLVSLLE--ATQGQVLVGSQADVSKRALSA--TVVDGVEW 350
Query: 393 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR-YGLAAGIMTKDLNVANTVSRSIRAGI 451
+ + E+FGP++ +++F +V AI N LA + KD++VA + I++G
Sbjct: 351 NDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGD 410
Query: 452 IWIN--CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492
+N AF P+GG SG G G S + KSV
Sbjct: 411 AQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 161/351 (45%), Gaps = 20/351 (5%)
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
Y EP+GVV I WN+P + + A+AAG +++KP+E + +A A +
Sbjct: 115 YIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYL 174
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
D + V+ G P + D + +TGST VG+ +M AAA +L PV+LELGGK
Sbjct: 175 DKD-LYPVINGGVPETTELLKERFD--HILYTGSTGVGKIIMTAAA-KHLTPVTLELGGK 230
Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
SP + + D++ A G N G+ CVA + I ++ +KL + K + G
Sbjct: 231 SPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YG 289
Query: 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTED 393
+ + G + + F R++ IE K + PTI T+V
Sbjct: 290 EDAKKSRDYGRIISARHFQRVMGLIEGQK------VAYGGTGDAATRYIAPTILTDVDPQ 343
Query: 394 MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV-----ANTVSRSIR 448
+ + EIFGPV+ ++ +++EEAI+ N LA + + + V A T S +
Sbjct: 344 SPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVA 403
Query: 449 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS-VVTPIFN 498
A + ++ P+GG SG G G +S + +S +V P+ N
Sbjct: 404 ANDVIVHITL---HSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMN 451
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 156/343 (45%), Gaps = 15/343 (4%)
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
Y EP+GVV I WN+P + + A+AAG +I+KP+E + +A A L
Sbjct: 98 YIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIP-QY 156
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
+ + VV G P + D + +TGST VG+ VM AAA +L PV+LELGGK
Sbjct: 157 MDQNLYLVVKGGVPETTELLKERFD--HIMYTGSTAVGKIVM-AAAAKHLTPVTLELGGK 213
Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
SP + D D++ A G N G+ CVA + I ++ +KL + K + G
Sbjct: 214 SPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YG 272
Query: 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGK-REGATLLTXXXXXXXXXXXXEPTIFTNVTE 392
+ + G ++ + F R+ I++ K G T PTI +V
Sbjct: 273 EDAKQSRDYGRIINDRHFQRVKGLIDNQKVAHGGTW-------DQSSRYIAPTILVDVDP 325
Query: 393 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 452
+ + EIFGPVM ++ +++EEAI+ N LA + + + V + +G +
Sbjct: 326 QSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGV 385
Query: 453 WINCYFAFDS--DCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493
N + P+GG SG G G +S + +S +
Sbjct: 386 TANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCL 428
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 192/453 (42%), Gaps = 39/453 (8%)
Query: 47 GEAIARIAEGDKEDVDLAVKAA---RQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXX 103
G +A+ DK ++ A++AA R+ +D P A+R I LK AD
Sbjct: 91 GHKVAKFCYADKSLLNKAIEAALAARKEWDLKPI-----ADRAQIFLKAADMLSGPRRAE 145
Query: 104 XXXXXXX-XGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIG 161
GK A++ + R+ A A ++ G+ + + + R G
Sbjct: 146 ILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEG 205
Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
V I P+NF + +PAL G ++ KP++ L + + + AG+P ++
Sbjct: 206 FVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 264
Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSLELGGKSPL 276
VP GP G + S + ++FTGS + + + A + ++ E GGK+
Sbjct: 265 VPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP- 335
+ DV + L G+ C A SR+YV ++ + + +L+E+ VGDP
Sbjct: 325 FVHRSADVESVVSGTLRSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDPA 384
Query: 336 -----FDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTXXXXXXXXXXXXEPTIFTN 389
F AV +D K F RI ++EH + + T+L EP I +
Sbjct: 385 EDFGTFFSAV-----IDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVES 439
Query: 390 VTEDMLIAKNEIFGPVMALM-----KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 444
I K EIFGPV+++ K+K + + S T YGL + ++D +V +
Sbjct: 440 KDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDS--TTSYGLTGAVFSQDKDVVQEAT 497
Query: 445 RSIR--AGIIWIN--CYFAFDSDCPYGGYKMSG 473
+ +R AG +IN + P+GG + SG
Sbjct: 498 KVLRNAAGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 192/453 (42%), Gaps = 39/453 (8%)
Query: 47 GEAIARIAEGDKEDVDLAVKAA---RQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXX 103
G +A+ DK ++ A++AA R+ +D P A+R I LK AD
Sbjct: 91 GHKVAKFCYADKSLLNKAIEAALAARKEWDLKPI-----ADRAQIFLKAADMLSGPRRAE 145
Query: 104 XXXXXXX-XGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIG 161
GK A++ + R+ A A ++ G+ + + + R G
Sbjct: 146 ILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEG 205
Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
V I P+NF + +PAL G ++ KP++ L + + + AG+P ++
Sbjct: 206 FVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 264
Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSLELGGKSPL 276
VP GP G + S + ++FTGS + + + A + ++ E GGK+
Sbjct: 265 VPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP- 335
+ DV + L G+ C A +R+YV ++ + + +L+E+ VGDP
Sbjct: 325 FVHRSADVESVVSGTLRSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDPA 384
Query: 336 -----FDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTXXXXXXXXXXXXEPTIFTN 389
F AV +D K F RI ++EH + + T+L EP I +
Sbjct: 385 EDFGTFFSAV-----IDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVES 439
Query: 390 VTEDMLIAKNEIFGPVMALM-----KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 444
I K EIFGPV+++ K+K + + S T YGL + ++D +V +
Sbjct: 440 KDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDS--TTSYGLTGAVFSQDKDVVQEAT 497
Query: 445 RSIR--AGIIWIN--CYFAFDSDCPYGGYKMSG 473
+ +R AG +IN + P+GG + SG
Sbjct: 498 KVLRNAAGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 191/448 (42%), Gaps = 35/448 (7%)
Query: 50 IARIAEGDKEDVDLAVKAA---RQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXX 106
+A+ DK ++ A+ AA R+ +D P A+R + LK AD
Sbjct: 91 VAKFCYADKALLNRAIDAALAARKEWDLKPM-----ADRAQVFLKAADMLSGPRRAEVLA 145
Query: 107 XXXX-XGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIGVVG 164
GK A++ + R+ A A ++ GE + + + R G V
Sbjct: 146 KTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVA 205
Query: 165 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG 224
I P+NF + +PAL G ++ KP++ L + + + AG+P ++ VP
Sbjct: 206 AISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPA 264
Query: 225 FGPTAGAAIASHMDIDKVSFTGST----DVGRQVMQAAATSNLKP-VSLELGGKSPLLIF 279
GPT G + S + ++FTGS + RQV Q P ++ E GGK+ +
Sbjct: 265 DGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVH 324
Query: 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP---- 335
DV++ L G+ C A SR+YV + ++ + + +L+E+ VGDP
Sbjct: 325 SSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDF 384
Query: 336 --FDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTXXXXXXXXXXXXEPTIFTNVTE 392
F AV +D K F RI ++EH + + ++L EP I +
Sbjct: 385 GTFFSAV-----IDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDP 439
Query: 393 DMLIAKNEIFGPVMALMKF--KTVEEAIKSANN-TRYGLAAGIMTKDLNVANTVSRSIR- 448
I K EIFGPV+ + + E +K ++ T YGL + +D + +R +R
Sbjct: 440 QEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRN 499
Query: 449 -AGIIWIN--CYFAFDSDCPYGGYKMSG 473
AG +IN + P+GG + SG
Sbjct: 500 AAGNFYINDKSTGSVVGQQPFGGARASG 527
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 191/453 (42%), Gaps = 39/453 (8%)
Query: 47 GEAIARIAEGDKEDVDLAVKAA---RQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXX 103
G +A+ DK ++ A++AA R+ +D P A+R I LK AD
Sbjct: 91 GHKVAKFCYADKSLLNKAIEAALAARKEWDLKPI-----ADRAQIFLKAADMLSGPRRAE 145
Query: 104 XXXXXXX-XGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIG 161
GK A++ + R+ A A ++ G+ + + + R G
Sbjct: 146 ILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEG 205
Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
V I P+NF + +PAL G ++ KP++ L + + + AG+P ++
Sbjct: 206 FVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 264
Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSLELGGKSPL 276
VP GP G + S + ++FTGS + + + A + ++ E GGK+
Sbjct: 265 VPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP- 335
+ DV + L G+ C A R+YV ++ + + +L+E+ VGDP
Sbjct: 325 FVHRSADVESVVSGTLRSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDPA 384
Query: 336 -----FDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTXXXXXXXXXXXXEPTIFTN 389
F AV +D K F RI ++EH + + T+L EP I +
Sbjct: 385 EDFGTFFSAV-----IDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVES 439
Query: 390 VTEDMLIAKNEIFGPVMALM-----KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 444
I K EIFGPV+++ K+K + + S T YGL + ++D +V +
Sbjct: 440 KDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDS--TTSYGLTGAVFSQDKDVVQEAT 497
Query: 445 RSIR--AGIIWIN--CYFAFDSDCPYGGYKMSG 473
+ +R AG +IN + P+GG + SG
Sbjct: 498 KVLRNAAGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 181/457 (39%), Gaps = 55/457 (12%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
+ K + G+++ +G DP TG A+ R++ E +DLA + D G R
Sbjct: 6 ELLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVS---SEGLDLARAFSFAREDGGAALR 61
Query: 80 -FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYA--GA 136
+ A+R + G + + + DI G TL YYA GA
Sbjct: 62 ALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGA 120
Query: 137 A-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
+ ++H E L R+ + P GV I +NFP+ + K +PAL +G
Sbjct: 121 SLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWAKAAPALLSGV 180
Query: 189 TMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
+IVKPA T L A + +P G L+++ G ++ + D VSFTGS
Sbjct: 181 PVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGS 237
Query: 248 TDVGRQVMQAAATSNLKPVSLELGGK---------SPLLIFDDVDVNTAADMALLGIL-- 296
D AAT P ++ G + S +L D A D+ + ++
Sbjct: 238 ADT-------AATLRAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVRE 290
Query: 297 --FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 354
G+ C A R +V E + + L K VG+P + AVR G V ++Q++ +
Sbjct: 291 MTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENV 350
Query: 355 LSYIEHGKREG-----ATLLTXXXXXXXXXXXXEPTIFTNVTED--MLIAKNEIFGPVMA 407
L+ I + E ++ + P +F D L+ E+FGPV +
Sbjct: 351 LAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVAS 410
Query: 408 LMKFKTVEE--------AIKSANNTRYGLAAGIMTKD 436
+ ++ + A+ A + L A I + D
Sbjct: 411 VAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSND 447
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 182/454 (40%), Gaps = 49/454 (10%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
+ K + G+++ +G DP TG A+ R++ E +DLA + D G R
Sbjct: 6 ELLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVS---SEGLDLARAFSFAREDGGAALR 61
Query: 80 -FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYA--GA 136
+ A+R + G + + + DI G TL YYA GA
Sbjct: 62 ALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGA 120
Query: 137 A-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
+ ++H E L R+ + P GV I +NFP+ + K +PAL +G
Sbjct: 121 SLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGV 180
Query: 189 TMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
+IVKPA T L A + +P G L+++ G ++ + D VSFTGS
Sbjct: 181 PVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGS 237
Query: 248 TDVGRQV------MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL----F 297
D + +Q A N++ SL S +L D A D+ + ++
Sbjct: 238 ADTAATLRAHPAFVQRGARLNVQADSL----NSAILCADATPDTPAFDLFIKEVVREMTV 293
Query: 298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357
G+ C A R +V E + + L K VG+P + AVR G V ++Q++ +L+
Sbjct: 294 KSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAG 353
Query: 358 IEHGKREG-----ATLLTXXXXXXXXXXXXEPTIFTNVTED--MLIAKNEIFGPVMALMK 410
I + E ++ + P +F D L+ E+FGPV ++
Sbjct: 354 IAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAP 413
Query: 411 FKTVEE--------AIKSANNTRYGLAAGIMTKD 436
++ + A+ A + L A I + D
Sbjct: 414 YRVTTDTNALPEAHAVALARRGQGSLVASIYSND 447
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 181/457 (39%), Gaps = 55/457 (12%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
+ K + G+++ +G DP TG A+ R++ E +DLA + D G R
Sbjct: 6 ELLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVS---SEGLDLARAFSFAREDGGAALR 61
Query: 80 -FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYA--GA 136
+ A+R + G + + + DI G TL YYA GA
Sbjct: 62 ALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGA 120
Query: 137 A-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
+ ++H E L R+ + P GV I +NFP+ + K +PAL +G
Sbjct: 121 SLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGV 180
Query: 189 TMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
+IVKPA T L A + +P G L+++ G ++ + D VSFTGS
Sbjct: 181 PVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGS 237
Query: 248 TDVGRQVMQAAATSNLKPVSLELGGK---------SPLLIFDDVDVNTAADMALLGIL-- 296
D AAT P ++ G + S +L D A D+ + ++
Sbjct: 238 ADT-------AATLRAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVRE 290
Query: 297 --FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 354
G+ C A R +V E + + L K VG+P + AVR G V ++Q++ +
Sbjct: 291 MTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENV 350
Query: 355 LSYIEHGKREG-----ATLLTXXXXXXXXXXXXEPTIFTNVTED--MLIAKNEIFGPVMA 407
L+ I + E ++ + P +F D L+ E+FGPV +
Sbjct: 351 LAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVAS 410
Query: 408 LMKFKTVEE--------AIKSANNTRYGLAAGIMTKD 436
+ ++ + A+ A + L A I + D
Sbjct: 411 VAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSND 447
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 181/457 (39%), Gaps = 55/457 (12%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
+ K + G+++ +G DP TG A+ R++ E +DLA + D G R
Sbjct: 4 ELLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVS---SEGLDLARAFSFAREDGGAALR 59
Query: 80 -FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYA--GA 136
+ A+R + G + + + DI G TL YYA GA
Sbjct: 60 ALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGA 118
Query: 137 A-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
+ ++H E L R+ + P GV I +NFP+ + K +PAL +G
Sbjct: 119 SLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGV 178
Query: 189 TMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
+IVKPA T L A + +P G L+++ G ++ + D VSFTGS
Sbjct: 179 PVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGS 235
Query: 248 TDVGRQVMQAAATSNLKPVSLELGGK---------SPLLIFDDVDVNTAADMALLGIL-- 296
D AAT P ++ G + S +L D A D+ + ++
Sbjct: 236 ADT-------AATLRAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVRE 288
Query: 297 --FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 354
G+ C A R +V E + + L K VG+P + AVR G V ++Q++ +
Sbjct: 289 MTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENV 348
Query: 355 LSYIEHGKREG-----ATLLTXXXXXXXXXXXXEPTIFTNVTED--MLIAKNEIFGPVMA 407
L+ I + E ++ + P +F D L+ E+FGPV +
Sbjct: 349 LAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVAS 408
Query: 408 LMKFKTVEE--------AIKSANNTRYGLAAGIMTKD 436
+ ++ + A+ A + L A I + D
Sbjct: 409 VAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSND 445
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 180/457 (39%), Gaps = 55/457 (12%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
+ K + G+++ +G DP TG A+ R++ E +DLA + D G R
Sbjct: 6 ELLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVS---SEGLDLARAFSFAREDGGAALR 61
Query: 80 -FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYA--GA 136
+ A+R + G + + + DI G TL YYA GA
Sbjct: 62 ALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGA 120
Query: 137 A-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
+ ++H E L R+ + P GV I +NFP+ + K +PAL +G
Sbjct: 121 SLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGV 180
Query: 189 TMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
+IVKPA T L A + +P G L+++ G ++ + D VSFTGS
Sbjct: 181 PVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGS 237
Query: 248 TDVGRQVMQAAATSNLKPVSLELGGK---------SPLLIFDDVDVNTAADMALLGIL-- 296
D AAT P ++ G + S +L D A D+ + ++
Sbjct: 238 ADT-------AATLRAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVRE 290
Query: 297 --FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 354
G+ A R +V E + + L K VG+P + AVR G V ++Q++ +
Sbjct: 291 MTVKSGQKATAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENV 350
Query: 355 LSYIEHGKREG-----ATLLTXXXXXXXXXXXXEPTIFTNVTED--MLIAKNEIFGPVMA 407
L+ I + E ++ + P +F D L+ E+FGPV +
Sbjct: 351 LAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVAS 410
Query: 408 LMKFKTVEE--------AIKSANNTRYGLAAGIMTKD 436
+ ++ + A+ A + L A I + D
Sbjct: 411 VAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSND 447
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 10/203 (4%)
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP----AEQTP 199
+L+ L T+ EP+G++ I+P PT+ K +L +I P T
Sbjct: 88 ILEEDDNLGTXTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTN 147
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
A A AG P ++ + A+ H DI + TG G ++AA
Sbjct: 148 DAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALXKHDDIALILATG----GPGXVKAAY 203
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
+S KP G P++I + D+ A L F+ G +C + V V + +YDE
Sbjct: 204 SSG-KPAIGVGAGNVPVVIDETADIKRAVASVLXSKTFDNGVVCASEQAVIVVDEVYDEV 262
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQ 342
+++ KA V+ VR+
Sbjct: 263 KERFASH-KAHVLSKTDADKVRK 284
>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi
Length = 510
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 84/212 (39%), Gaps = 26/212 (12%)
Query: 121 GDIPGAANTLRYYAGAADK--IHGEVLKM---SRA-LQGYTLRE------PIGVVGHIIP 168
G+I AN LR +A + H +L +RA L +R P+ V G
Sbjct: 89 GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGA--- 145
Query: 169 WNFPTTMFFM--KVSPALAAGCTMIVKPAEQTP----LIALYFAHLAKLAGVPDGVLNVV 222
NFP + ALAAGC +IVK P ++A K +P + ++
Sbjct: 146 SNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLL 205
Query: 223 PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL--ELGGKSPLLIFD 280
G G A+ SH +I V FTGS GR + A +P+ ELG +P IF
Sbjct: 206 QGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN-LAHERPEPIPFYGELGAINPTFIFP 264
Query: 281 DVDVNTA--ADMALLGILFNKGEICVASSRVY 310
A AD + + G+ C V+
Sbjct: 265 SAMRAKADLADQFVASMTMGCGQFCTKPGVVF 296
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 71/182 (39%), Gaps = 13/182 (7%)
Query: 156 LREPIGVVGHIIPWNFPTTMFFM--KVSPALAAGCTMIVKPAEQTP----LIALYFAHLA 209
++ P+G V NFP + ALAAGC ++VK P ++A
Sbjct: 166 VQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAI 225
Query: 210 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ-AAATSNLKPVSL 268
+ GV GV +++ G G A+ H I V FTGS GR + AA P
Sbjct: 226 RKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFG 285
Query: 269 ELGGKSPLLIFDDVDVNTAADMALLG----ILFNKGEICVASSRVYVQEGI-YDEFEKKL 323
ELG +P + + + A+ G + G+ C V EG D F
Sbjct: 286 ELGSVNPXFLLPEA-LKARAETLGQGWAGSLTXGAGQFCTNPGIAVVIEGADADRFTTAA 344
Query: 324 VE 325
VE
Sbjct: 345 VE 346
>pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|B Chain B, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|C Chain C, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|D Chain D, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
Length = 464
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 17/174 (9%)
Query: 159 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL----YFAHLAKLAGV 214
P+GVV +IP PT+ K ++ AG +++ P L + A+ AG
Sbjct: 108 PLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGC 167
Query: 215 PDGVLN--VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
P G ++ VP T + H D + TG G +++AA +S + + G
Sbjct: 168 PKGAISCMTVPTIQGT--DQLMKHKDTAVILATG----GSAMVKAAYSSGTPAIGVG-PG 220
Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ----EGIYDEFEKK 322
P I ++ A L F+ G IC + V V+ E + EF K+
Sbjct: 221 NGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQ 274
>pdb|3CMQ|A Chain A, Crystal Structure Of Human Mitochondrial Phenylalanine
Trna Synthetase
pdb|3HFV|A Chain A, Crystal Structure Of Human Mitochondrial Phenylalanyl-Trna
Synthetase Complexed With M-Tyrosine
pdb|3TEG|A Chain A, Bacterial And Eukaryotic Phenylalanyl-Trna Synthetases
Catalyze Misaminoacylation Of Trnaphe With
3,4-Dihydroxy-L-Phenylalanine (L- Dopa)
pdb|3TUP|A Chain A, Crystal Structure Of Human Mitochondrial Phers Complexed
With Trnaphe In The Active Open State
Length = 415
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 386 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 445
IF + L +K+E+F + + E++ +SA+ + + ++ T++R
Sbjct: 154 IFHQLEAVRLFSKHELFAGIKDGESLQLFEQSSRSAHKQETHTMEAVKLVEFDLKQTLTR 213
Query: 446 SI------RAGIIWINCYFAF 460
+ I W++CYF F
Sbjct: 214 LMAHLFGDELEIRWVDCYFPF 234
>pdb|3CYV|A Chain A, Crystal Structure Of Uroporphyrinogen Decarboxylase From
Shigella Flexineri: New Insights Into Its Catalytic
Mechanism
Length = 354
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 10/106 (9%)
Query: 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV---LNVVPGFGPTAGAAI 233
FM + C + ++P + PL A + + VPD + L G GP + +
Sbjct: 46 FMSLCKNAELACEVTLQPLRRYPLDAAIL--FSDILTVPDAMGLGLYFEAGEGPRFTSPV 103
Query: 234 ASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279
D+DK+ D VM A T + EL G+ PL+ F
Sbjct: 104 TCKADVDKLPIPDPEDELGYVMNAVRT-----IRHELKGEVPLIGF 144
>pdb|1MZJ|A Chain A, Crystal Structure Of The Priming Beta-Ketosynthase From
The R1128 Polyketide Biosynthetic Pathway
pdb|1MZJ|B Chain B, Crystal Structure Of The Priming Beta-Ketosynthase From
The R1128 Polyketide Biosynthetic Pathway
Length = 339
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 14 FKMPEIKFTKLFINGEFV--DSVSGK--------TFETIDPRTGEAIARIAEGDKEDVDL 63
++PE +F+++ G + VS K T E I+ RTG RIAE D+ +
Sbjct: 4 LRVPERRFSRVLGVGSYRPRREVSNKEVCTWIDSTEEWIETRTGIRSRRIAEPDETIQVM 63
Query: 64 AVKAARQAFDH 74
V A+R+A +H
Sbjct: 64 GVAASRRALEH 74
>pdb|1JJU|A Chain A, Structure Of A Quinohemoprotein Amine Dehydrogenase With A
Unique Redox Cofactor And Highly Unusual Crosslinking
pdb|1PBY|A Chain A, Structure Of The Phenylhydrazine Adduct Of The
Quinohemoprotein Amine Dehydrogenase From Paracoccus
Denitrificans At 1.7 A Resolution
Length = 489
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 251 GRQVMQAAATSNLKPVSLELGG-KSPLLIFDDVD-VNTAADMALLGILFNKGEI 302
G V++ AT PVSLELGG K L+ +D D ++ D+ + I N G I
Sbjct: 321 GVTVLKLTATGTPGPVSLELGGQKVDLVAYDRPDRISIVPDLTIARIGGNGGPI 374
>pdb|1O20|A Chain A, Crystal Structure Of Gamma-glutamyl Phosphate Reductase
(tm0293) From Thermotoga Maritima At 2.00 A Resolution
Length = 427
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 400 EIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA 459
E ++A+ K V+EAI+ G + I+T++ + A I A +++N
Sbjct: 322 EYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTR 381
Query: 460 FDSDCPYGGYKMSGFGRDCGLES 482
F GG GFG + G+ +
Sbjct: 382 FTD----GG--QFGFGAEIGIST 398
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,130,180
Number of Sequences: 62578
Number of extensions: 561436
Number of successful extensions: 1833
Number of sequences better than 100.0: 99
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1479
Number of HSP's gapped (non-prelim): 100
length of query: 502
length of database: 14,973,337
effective HSP length: 103
effective length of query: 399
effective length of database: 8,527,803
effective search space: 3402593397
effective search space used: 3402593397
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)