Query         010735
Match_columns 502
No_of_seqs    230 out of 1845
Neff          8.8 
Searched_HMMs 46136
Date          Fri Mar 29 03:58:20 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010735.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010735hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG2450 Aldehyde dehydrogenase 100.0  2E-109  3E-114  820.6  45.7  480   22-501    21-501 (501)
  2 PLN02766 coniferyl-aldehyde de 100.0  2E-105  4E-110  841.3  59.8  497    6-502     3-501 (501)
  3 KOG2451 Aldehyde dehydrogenase 100.0  7E-106  2E-110  759.0  44.7  471   21-495    23-498 (503)
  4 PRK11241 gabD succinate-semial 100.0  2E-104  4E-109  829.2  56.2  469   23-495    12-481 (482)
  5 PLN02466 aldehyde dehydrogenas 100.0  3E-103  7E-108  827.0  59.5  481   22-502    58-538 (538)
  6 COG1012 PutA NAD-dependent ald 100.0  2E-103  5E-108  813.8  55.3  466   23-497     2-470 (472)
  7 PLN02419 methylmalonate-semial 100.0  8E-103  2E-107  822.7  58.9  481   10-496    98-590 (604)
  8 cd07140 ALDH_F1L_FTFDH 10-form 100.0  5E-102  1E-106  812.6  57.6  476   20-495     4-485 (486)
  9 TIGR03374 ABALDH 1-pyrroline d 100.0  1E-101  2E-106  807.7  55.5  468   22-494     2-471 (472)
 10 cd07142 ALDH_F2BC Arabidosis a 100.0  2E-101  5E-106  808.8  56.7  474   21-494     3-476 (476)
 11 PLN02278 succinic semialdehyde 100.0  5E-101  1E-105  807.9  57.3  470   22-495    25-495 (498)
 12 cd07113 ALDH_PADH_NahF Escheri 100.0  5E-101  1E-105  806.9  56.4  468   24-495     2-476 (477)
 13 PRK13252 betaine aldehyde dehy 100.0  5E-101  1E-105  809.0  56.5  475   19-497     4-482 (488)
 14 cd07117 ALDH_StaphAldA1 Unchar 100.0  2E-100  3E-105  800.3  56.5  469   23-495     2-474 (475)
 15 cd07559 ALDH_ACDHII_AcoD-like  100.0  1E-100  3E-105  802.5  55.7  470   23-496     2-480 (480)
 16 cd07141 ALDH_F1AB_F2_RALDH1 NA 100.0  3E-100  6E-105  802.0  57.0  476   19-494     4-480 (481)
 17 PLN02467 betaine aldehyde dehy 100.0 1.1E-99  2E-104  797.1  58.6  473   20-496     6-489 (503)
 18 cd07143 ALDH_AldA_AN0554 Asper 100.0 1.2E-99  3E-104  794.9  57.4  473   22-495     7-480 (481)
 19 TIGR03216 OH_muco_semi_DH 2-hy 100.0 1.1E-99  2E-104  797.5  56.6  468   23-495     2-480 (481)
 20 PLN02315 aldehyde dehydrogenas 100.0 1.1E-99  2E-104  796.2  56.1  469   21-497    20-496 (508)
 21 TIGR02299 HpaE 5-carboxymethyl 100.0 2.5E-99  6E-104  796.6  55.6  470   23-497     2-479 (488)
 22 cd07091 ALDH_F1-2_Ald2-like AL 100.0 4.3E-99  9E-104  793.1  56.8  472   21-494     3-476 (476)
 23 PRK13473 gamma-aminobutyraldeh 100.0 4.4E-99  1E-103  792.8  56.4  470   22-496     3-474 (475)
 24 cd07144 ALDH_ALD2-YMR170C Sacc 100.0 5.4E-99  1E-103  793.3  56.9  473   20-495     6-483 (484)
 25 cd07116 ALDH_ACDHII-AcoD Ralst 100.0 4.7E-99  1E-103  792.1  56.1  467   23-495     2-478 (479)
 26 cd07085 ALDH_F6_MMSDH Methylma 100.0 1.3E-98  3E-103  789.2  56.2  468   23-495     2-477 (478)
 27 cd07119 ALDH_BADH-GbsA Bacillu 100.0 2.2E-98  5E-103  788.8  57.1  473   25-499     1-477 (482)
 28 PRK09847 gamma-glutamyl-gamma- 100.0 5.1E-98  1E-102  784.4  57.0  471   23-495    21-492 (494)
 29 cd07086 ALDH_F7_AASADH-like NA 100.0   4E-98  9E-103  784.9  55.3  467   24-496     1-477 (478)
 30 cd07097 ALDH_KGSADH-YcbD Bacil 100.0 4.3E-98  9E-103  784.3  54.8  465   23-493     2-472 (473)
 31 PRK13968 putative succinate se 100.0 4.5E-98  1E-102  779.3  54.4  455   36-495     6-460 (462)
 32 TIGR01804 BADH glycine betaine 100.0 4.5E-98  1E-102  783.5  54.1  463   25-490     1-467 (467)
 33 cd07124 ALDH_PutA-P5CDH-RocA D 100.0   1E-97  2E-102  786.9  55.7  470   21-496    32-512 (512)
 34 cd07130 ALDH_F7_AASADH NAD+-de 100.0 1.2E-97  3E-102  779.8  55.9  464   25-496     2-473 (474)
 35 cd07123 ALDH_F4-17_P5CDH Delta 100.0   2E-97  4E-102  784.0  55.3  470   21-496    32-520 (522)
 36 TIGR01236 D1pyr5carbox1 delta- 100.0 1.7E-97  4E-102  783.8  54.6  473   20-497    30-522 (533)
 37 PRK09406 gabD1 succinic semial 100.0 1.5E-97  3E-102  774.4  53.3  451   39-494     3-456 (457)
 38 cd07088 ALDH_LactADH-AldA Esch 100.0 3.4E-97  7E-102  778.1  54.6  465   25-493     1-467 (468)
 39 cd07138 ALDH_CddD_SSP0762 Rhod 100.0 3.4E-97  7E-102  776.7  54.1  462   24-493     1-465 (466)
 40 cd07151 ALDH_HBenzADH NADP+-de 100.0 6.5E-97  1E-101  773.8  55.2  461   28-495     1-464 (465)
 41 cd07111 ALDH_F16 Aldehyde dehy 100.0 6.1E-97  1E-101  772.8  54.7  459   19-491    19-477 (480)
 42 cd07139 ALDH_AldA-Rv0768 Mycob 100.0 8.1E-97  2E-101  775.4  55.7  467   24-493     1-470 (471)
 43 PRK09457 astD succinylglutamic 100.0 1.4E-96  3E-101  773.7  56.9  467   23-496     2-471 (487)
 44 cd07131 ALDH_AldH-CAJ73105 Unc 100.0 1.1E-96  2E-101  775.7  56.2  469   24-496     1-477 (478)
 45 TIGR01237 D1pyr5carbox2 delta- 100.0 8.5E-97  2E-101  778.9  55.1  470   21-496    32-511 (511)
 46 TIGR01780 SSADH succinate-semi 100.0 9.2E-97  2E-101  769.1  51.4  446   41-490     1-448 (448)
 47 PRK03137 1-pyrroline-5-carboxy 100.0   4E-96  9E-101  774.3  55.5  470   20-496    35-514 (514)
 48 TIGR03250 PhnAcAld_DH putative 100.0   6E-96  1E-100  766.0  55.7  461   22-496     4-472 (472)
 49 cd07120 ALDH_PsfA-ACA09737 Pse 100.0 5.4E-96  1E-100  762.2  54.2  450   41-493     1-454 (455)
 50 TIGR01722 MMSDH methylmalonic  100.0 1.2E-95  3E-100  766.1  56.8  468   23-496     2-477 (477)
 51 cd07083 ALDH_P5CDH ALDH subfam 100.0 9.3E-96  2E-100  769.8  55.4  469   20-495    17-499 (500)
 52 PLN00412 NADP-dependent glycer 100.0 1.1E-95  2E-100  766.9  55.9  467   20-497    14-489 (496)
 53 cd07107 ALDH_PhdK-like Nocardi 100.0 1.2E-95  3E-100  763.0  52.7  450   41-495     1-455 (456)
 54 cd07128 ALDH_MaoC-N N-terminal 100.0 1.5E-95  3E-100  763.8  53.2  460   23-492     2-501 (513)
 55 cd07112 ALDH_GABALDH-PuuC Esch 100.0 2.5E-95  5E-100  760.6  53.9  457   37-493     2-461 (462)
 56 TIGR03240 arg_catab_astD succi 100.0 4.3E-95  9E-100  762.5  55.9  466   24-496     1-469 (484)
 57 cd07115 ALDH_HMSADH_HapE Pseud 100.0 2.1E-95  5E-100  761.1  53.2  451   42-495     2-452 (453)
 58 cd07145 ALDH_LactADH_F420-Bios 100.0 2.4E-95  5E-100  761.2  52.0  449   39-493     1-455 (456)
 59 cd07089 ALDH_CddD-AldA-like Rh 100.0 3.8E-95  8E-100  758.7  53.2  450   41-493     1-458 (459)
 60 cd07110 ALDH_F10_BADH Arabidop 100.0 3.8E-95  8E-100  759.7  52.9  449   41-493     1-455 (456)
 61 cd07090 ALDH_F9_TMBADH NAD+-de 100.0 4.3E-95  9E-100  759.5  52.7  451   41-496     1-456 (457)
 62 cd07118 ALDH_SNDH Gluconobacte 100.0 5.8E-95 1.3E-99  756.2  53.3  450   42-493     2-453 (454)
 63 PLN02174 aldehyde dehydrogenas 100.0 8.8E-95 1.9E-99  750.1  51.5  431   56-495     7-444 (484)
 64 cd07148 ALDH_RL0313 Uncharacte 100.0 1.2E-94 2.6E-99  754.1  52.8  446   40-493     2-454 (455)
 65 PF00171 Aldedh:  Aldehyde dehy 100.0 7.3E-96  2E-100  766.3  43.3  458   30-492     1-462 (462)
 66 cd07109 ALDH_AAS00426 Uncharac 100.0 1.6E-94 3.4E-99  754.7  52.5  448   41-493     1-453 (454)
 67 PRK09407 gabD2 succinic semial 100.0 1.4E-94   3E-99  763.5  52.5  465   24-496    21-492 (524)
 68 cd07106 ALDH_AldA-AAD23400 Str 100.0 2.1E-94 4.6E-99  752.1  53.0  445   41-493     1-445 (446)
 69 cd07150 ALDH_VaniDH_like Pseud 100.0 1.4E-94   3E-99  755.4  51.3  448   39-493     1-450 (451)
 70 cd07094 ALDH_F21_LactADH-like  100.0 5.5E-94 1.2E-98  750.9  52.4  446   39-493     1-452 (453)
 71 cd07125 ALDH_PutA-P5CDH Delta( 100.0 1.2E-93 2.6E-98  756.2  55.4  466   24-497    35-509 (518)
 72 TIGR02278 PaaN-DH phenylacetic 100.0 7.9E-94 1.7E-98  771.0  54.9  462   23-494     2-495 (663)
 73 cd07101 ALDH_SSADH2_GabD2 Myco 100.0 6.7E-94 1.5E-98  749.4  52.0  447   42-494     1-454 (454)
 74 cd07082 ALDH_F11_NP-GAPDH NADP 100.0   2E-93 4.4E-98  750.0  55.7  465   22-495     2-473 (473)
 75 PRK11903 aldehyde dehydrogenas 100.0 1.3E-93 2.7E-98  751.6  53.2  466   20-494     3-506 (521)
 76 cd07114 ALDH_DhaS Uncharacteri 100.0 1.6E-93 3.6E-98  747.6  53.1  452   41-494     1-457 (457)
 77 cd07092 ALDH_ABALDH-YdcW Esche 100.0   2E-93 4.3E-98  746.5  52.9  448   41-493     1-449 (450)
 78 cd07102 ALDH_EDX86601 Uncharac 100.0 2.5E-93 5.5E-98  746.1  52.8  447   42-493     1-451 (452)
 79 cd07147 ALDH_F21_RNP123 Aldehy 100.0 2.4E-93 5.1E-98  745.9  51.6  446   39-494     1-452 (452)
 80 TIGR01238 D1pyr5carbox3 delta- 100.0   6E-93 1.3E-97  744.7  53.4  451   22-491    38-500 (500)
 81 cd07108 ALDH_MGR_2402 Magnetos 100.0 4.1E-93   9E-98  744.6  52.1  448   41-493     1-456 (457)
 82 PRK11563 bifunctional aldehyde 100.0 7.4E-93 1.6E-97  768.8  53.2  467   18-494     1-507 (675)
 83 cd07099 ALDH_DDALDH Methylomon 100.0 1.4E-92   3E-97  740.7  53.2  446   42-493     1-452 (453)
 84 cd07152 ALDH_BenzADH NAD-depen 100.0 1.3E-92 2.7E-97  738.1  51.6  439   47-493     1-442 (443)
 85 cd07103 ALDH_F5_SSADH_GabD Mit 100.0 2.4E-92 5.2E-97  738.9  52.6  449   41-493     1-450 (451)
 86 cd07093 ALDH_F8_HMSADH Human a 100.0 2.5E-92 5.4E-97  739.2  52.3  450   41-493     1-454 (455)
 87 cd07146 ALDH_PhpJ Streptomyces 100.0   4E-92 8.6E-97  733.7  52.2  442   40-493     2-450 (451)
 88 cd07098 ALDH_F15-22 Aldehyde d 100.0 5.6E-92 1.2E-96  737.6  53.5  450   42-495     1-464 (465)
 89 cd07100 ALDH_SSADH1_GabD1 Myco 100.0 5.7E-92 1.2E-96  729.2  49.2  427   61-493     1-428 (429)
 90 cd07149 ALDH_y4uC Uncharacteri 100.0 4.3E-91 9.3E-96  730.3  51.6  446   39-493     1-452 (453)
 91 PLN02203 aldehyde dehydrogenas 100.0 1.1E-89 2.5E-94  714.6  51.1  433   55-496     2-444 (484)
 92 cd07095 ALDH_SGSD_AstD N-succi 100.0 5.6E-90 1.2E-94  713.0  48.3  427   60-492     1-429 (431)
 93 PRK10090 aldehyde dehydrogenas 100.0   1E-89 2.2E-94  703.8  47.9  406   89-496     1-408 (409)
 94 PRK11904 bifunctional proline  100.0 3.5E-89 7.6E-94  759.3  55.7  462   23-496   554-1027(1038)
 95 cd07135 ALDH_F14-YMR110C Sacch 100.0 1.6E-89 3.5E-94  709.3  48.7  427   56-493     2-435 (436)
 96 PTZ00381 aldehyde dehydrogenas 100.0 5.2E-89 1.1E-93  713.0  51.0  431   55-496     3-439 (493)
 97 cd07126 ALDH_F12_P5CDH Delta(1 100.0 8.3E-89 1.8E-93  707.2  51.8  441   24-480     1-474 (489)
 98 cd07104 ALDH_BenzADH-like ALDH 100.0 6.7E-89 1.4E-93  709.3  49.3  427   60-493     1-430 (431)
 99 cd07105 ALDH_SaliADH Salicylal 100.0 7.4E-89 1.6E-93  707.0  49.3  425   60-493     1-431 (432)
100 cd07136 ALDH_YwdH-P39616 Bacil 100.0 1.3E-88 2.8E-93  702.2  48.0  420   63-495     2-427 (449)
101 cd07137 ALDH_F3FHI Plant aldeh 100.0 2.2E-88 4.9E-93  700.0  49.4  423   63-494     3-432 (432)
102 cd07133 ALDH_CALDH_CalB Conife 100.0 1.5E-87 3.1E-92  695.6  49.8  423   63-493     2-433 (434)
103 cd07134 ALDH_AlkH-like Pseudom 100.0 8.5E-87 1.8E-91  689.7  49.4  424   63-493     2-432 (433)
104 PRK11809 putA trifunctional tr 100.0 3.2E-86   7E-91  740.9  52.9  447   25-491   650-1111(1318)
105 cd07132 ALDH_F3AB Aldehyde deh 100.0 3.8E-86 8.2E-91  686.2  48.4  422   63-497     2-429 (443)
106 PRK11905 bifunctional proline  100.0 8.1E-86 1.8E-90  740.0  53.8  454   23-495   556-1018(1208)
107 cd07087 ALDH_F3-13-14_CALDH-li 100.0   2E-84 4.4E-89  671.6  48.0  418   63-493     2-425 (426)
108 KOG2454 Betaine aldehyde dehyd 100.0 1.7E-82 3.8E-87  599.6  32.8  460   32-495    59-531 (583)
109 cd07078 ALDH NAD(P)+ dependent 100.0 1.5E-80 3.3E-85  647.5  49.4  428   62-493     1-431 (432)
110 cd07129 ALDH_KGSADH Alpha-Keto 100.0 8.7E-81 1.9E-85  648.5  45.8  415   61-489     1-449 (454)
111 TIGR02288 PaaN_2 phenylacetic  100.0 3.3E-80 7.2E-85  646.9  47.4  434   38-491    66-542 (551)
112 cd07084 ALDH_KGSADH-like ALDH  100.0 2.3E-80 4.9E-85  642.8  43.1  414   62-492     2-440 (442)
113 cd07127 ALDH_PAD-PaaZ Phenylac 100.0 3.4E-79 7.4E-84  641.0  49.5  449   33-495    61-546 (549)
114 KOG2456 Aldehyde dehydrogenase 100.0 1.5E-80 3.2E-85  592.4  34.5  423   61-495     4-432 (477)
115 cd07121 ALDH_EutE Ethanolamine 100.0 4.1E-79 8.9E-84  628.6  37.1  401   58-493     3-421 (429)
116 KOG2452 Formyltetrahydrofolate 100.0   8E-79 1.7E-83  587.2  31.1  461   14-495   414-880 (881)
117 cd07081 ALDH_F20_ACDH_EutE-lik 100.0   1E-77 2.2E-82  617.8  39.3  408   61-494     1-438 (439)
118 PRK15398 aldehyde dehydrogenas 100.0 1.3E-77 2.8E-82  622.1  38.3  408   55-496    32-454 (465)
119 TIGR02518 EutH_ACDH acetaldehy 100.0   7E-75 1.5E-79  605.1  44.1  415   55-496     4-445 (488)
120 PRK00197 proA gamma-glutamyl p 100.0 5.1E-76 1.1E-80  605.3  34.7  388   59-498     4-414 (417)
121 cd07079 ALDH_F18-19_ProA-GPR G 100.0 5.4E-76 1.2E-80  603.1  33.2  381   63-495     2-405 (406)
122 cd07122 ALDH_F20_ACDH Coenzyme 100.0 4.9E-75 1.1E-79  596.8  35.7  409   61-494     1-435 (436)
123 PLN02418 delta-1-pyrroline-5-c 100.0 3.5E-74 7.5E-79  622.2  41.6  383   59-497   294-698 (718)
124 KOG2455 Delta-1-pyrroline-5-ca 100.0 9.2E-75   2E-79  555.5  32.0  469   21-494    59-546 (561)
125 PRK13805 bifunctional acetalde 100.0 8.5E-74 1.8E-78  636.8  40.1  425   52-502     5-457 (862)
126 COG4230 Delta 1-pyrroline-5-ca 100.0 7.6E-73 1.6E-77  556.5  36.2  451   24-492   116-575 (769)
127 KOG2453 Aldehyde dehydrogenase 100.0 1.2E-71 2.5E-76  517.2  26.1  468   25-500    23-498 (507)
128 cd07077 ALDH-like NAD(P)+-depe 100.0 1.7E-70 3.6E-75  563.2  34.9  373   67-493     2-396 (397)
129 cd06534 ALDH-SF NAD(P)+-depend 100.0   1E-68 2.2E-73  546.6  41.9  363   67-493     2-366 (367)
130 TIGR00407 proA gamma-glutamyl  100.0 2.2E-69 4.7E-74  549.4  34.4  375   68-490     1-398 (398)
131 TIGR01092 P5CS delta l-pyrroli 100.0   1E-68 2.3E-73  580.9  41.7  380   60-497   287-692 (715)
132 cd07080 ALDH_Acyl-CoA-Red_LuxC 100.0 3.1E-34 6.7E-39  295.6  36.3  362   58-450     4-390 (422)
133 COG0014 ProA Gamma-glutamyl ph 100.0 3.5E-35 7.5E-40  283.8  22.6  386   59-497     3-413 (417)
134 KOG4165 Gamma-glutamyl phospha 100.0 4.9E-27 1.1E-31  219.4  22.8  382   61-496     2-406 (433)
135 PF05893 LuxC:  Acyl-CoA reduct  99.8 6.9E-17 1.5E-21  164.6  36.9  372   79-488     2-398 (399)
136 KOG2449 Methylmalonate semiald  99.5 1.4E-14   3E-19  119.5   7.4  146  316-470     8-155 (157)
137 PF07368 DUF1487:  Protein of u  99.2 5.7E-10 1.2E-14  101.5  15.4  164  275-459     7-171 (215)
138 PRK11905 bifunctional proline   98.5 7.6E-07 1.6E-11  102.4  12.1  110  144-270  1063-1174(1208)
139 PF00815 Histidinol_dh:  Histid  97.7   0.066 1.4E-06   54.5  28.2  262  149-493    96-377 (412)
140 TIGR00069 hisD histidinol dehy  97.2     0.3 6.5E-06   49.4  26.6  266  149-493    78-360 (393)
141 COG0141 HisD Histidinol dehydr  97.2     0.2 4.4E-06   50.7  23.2  267  148-492   105-386 (425)
142 PRK13770 histidinol dehydrogen  97.1    0.39 8.4E-06   48.9  28.1  266  149-493   100-381 (416)
143 PRK00877 hisD bifunctional his  97.0    0.48 1.1E-05   48.5  30.2  263  149-493   110-391 (425)
144 PLN02926 histidinol dehydrogen  97.0    0.55 1.2E-05   48.1  29.6  263  149-493   110-394 (431)
145 PRK13769 histidinol dehydrogen  96.8    0.71 1.5E-05   46.3  26.9  255  149-493    83-340 (368)
146 cd06572 Histidinol_dh Histidin  96.7    0.87 1.9E-05   46.2  27.1  291  123-493    57-364 (390)
147 PRK12447 histidinol dehydrogen  96.7    0.94   2E-05   46.4  28.5  266  149-493   105-386 (426)
148 PRK11809 putA trifunctional tr  96.4   0.011 2.4E-07   68.9   9.2  104  144-263  1172-1275(1318)
149 KOG2450 Aldehyde dehydrogenase  85.0    0.13 2.9E-06   53.0  -2.3  110  347-459    80-195 (501)
150 COG4230 Delta 1-pyrroline-5-ca  83.7      11 0.00024   39.7  10.7  110  144-271   628-737 (769)
151 KOG2697 Histidinol dehydrogena  77.4      74  0.0016   31.0  17.8  168  149-328   116-296 (446)
152 COG1438 ArgR Arginine represso  60.9      85  0.0018   27.5   9.1   45  177-225    82-126 (150)
153 PF07287 DUF1446:  Protein of u  56.8      61  0.0013   32.9   8.7  103  256-375    65-170 (362)
154 PF07045 DUF1330:  Protein of u  55.7      45 0.00098   24.4   5.8   23  404-426    39-61  (65)
155 cd00532 MGS-like MGS-like doma  53.4      43 0.00092   27.6   6.0   61  207-269    36-105 (112)
156 PF03795 YCII:  YCII-related do  51.4      37 0.00081   26.7   5.2   60  352-427    22-81  (95)
157 PF03295 Pox_TAA1:  Poxvirus tr  49.7      31 0.00067   24.8   3.7   29  396-424     8-36  (63)
158 COG0521 MoaB Molybdopterin bio  49.4      59  0.0013   29.1   6.4   51  199-249    26-78  (169)
159 TIGR02667 moaB_proteo molybden  46.5      30 0.00064   30.8   4.2   50  202-251    24-76  (163)
160 PRK05066 arginine repressor; P  45.4 2.2E+02  0.0047   25.2   9.4   38  185-225    91-128 (156)
161 PF14097 SpoVAE:  Stage V sporu  42.9 1.9E+02  0.0042   25.8   8.4   55  187-242    24-86  (180)
162 PF13344 Hydrolase_6:  Haloacid  42.7      63  0.0014   26.0   5.3   84  169-254    12-95  (101)
163 PF01513 NAD_kinase:  ATP-NAD k  40.3 1.4E+02   0.003   29.2   8.3  101  190-297     4-135 (285)
164 cd01422 MGS Methylglyoxal synt  37.8 1.1E+02  0.0024   25.3   6.1   61  207-270    38-108 (115)
165 PRK12865 YciI-like protein; Re  36.1 2.2E+02  0.0048   22.6   7.5   24  405-428    53-76  (97)
166 cd01424 MGS_CPS_II Methylglyox  36.0 1.2E+02  0.0025   24.7   6.0   61  207-269    37-101 (110)
167 PF06945 DUF1289:  Protein of u  35.5      34 0.00074   23.9   2.2   21   76-96     29-49  (51)
168 COG3795 Uncharacterized protei  35.4 2.7E+02  0.0059   23.4   7.8   29  398-427    74-102 (123)
169 COG5470 Uncharacterized conser  33.4 1.2E+02  0.0027   24.2   5.2   22  406-427    55-76  (96)
170 PF13376 OmdA:  Bacteriocin-pro  32.1      70  0.0015   23.3   3.6   35   58-94      7-41  (63)
171 PRK10680 molybdopterin biosynt  31.6      48   0.001   34.4   3.5   51  202-252   206-257 (411)
172 PLN00125 Succinyl-CoA ligase [  31.2 5.3E+02   0.011   25.5  12.2  128  186-329   150-296 (300)
173 cd00886 MogA_MoaB MogA_MoaB fa  30.6      55  0.0012   28.6   3.3   51  201-251    21-74  (152)
174 PRK14497 putative molybdopteri  29.4      36 0.00078   36.6   2.2   50  202-251   208-258 (546)
175 TIGR02990 ectoine_eutA ectoine  28.1 4.5E+02  0.0099   24.9   9.3   97  172-268   103-211 (239)
176 TIGR00177 molyb_syn molybdenum  25.2      86  0.0019   27.1   3.5   51  201-251    28-79  (144)
177 PF12340 DUF3638:  Protein of u  24.7 3.9E+02  0.0084   25.3   7.9   81  271-371    52-137 (229)
178 PF00994 MoCF_biosynth:  Probab  24.3      95  0.0021   26.7   3.7   51  199-249    16-67  (144)
179 PF07085 DRTGG:  DRTGG domain;   24.2 1.5E+02  0.0033   23.8   4.7   45  214-259    38-82  (105)
180 smart00852 MoCF_biosynth Proba  24.0      92   0.002   26.4   3.5   51  201-251    19-70  (135)
181 TIGR03215 ac_ald_DH_ac acetald  24.0 1.8E+02  0.0039   28.5   5.8   57  231-288    57-113 (285)
182 cd00758 MoCF_BD MoCF_BD: molyb  23.3   1E+02  0.0023   26.1   3.7   51  201-251    20-71  (133)
183 cd01390 HMGB-UBF_HMG-box HMGB-  23.3 1.1E+02  0.0023   22.0   3.3   27   76-102    38-64  (66)
184 PRK14690 molybdopterin biosynt  23.2      57  0.0012   34.0   2.3   52  201-252   221-273 (419)
185 cd00885 cinA Competence-damage  22.9 1.8E+02   0.004   25.9   5.3   49  201-249    20-69  (170)
186 COG0136 Asd Aspartate-semialde  22.3 1.3E+02  0.0028   30.1   4.5  114  198-314    10-144 (334)
187 PRK05678 succinyl-CoA syntheta  22.2 3.9E+02  0.0085   26.2   7.8  130  186-329   145-290 (291)
188 PRK09417 mogA molybdenum cofac  22.2 1.6E+02  0.0034   27.1   4.8   52  201-252    24-80  (193)
189 PF11181 YflT:  Heat induced st  22.0 2.2E+02  0.0048   22.9   5.2   49  408-456     3-55  (103)
190 PRK03604 moaC bifunctional mol  21.3 1.3E+02  0.0028   29.9   4.3   53  200-252   175-229 (312)
191 PF08002 DUF1697:  Protein of u  20.7 1.7E+02  0.0036   25.2   4.4   50  184-237    40-90  (137)
192 COG2242 CobL Precorrin-6B meth  20.0 6.8E+02   0.015   22.9   8.3   58  196-259    65-122 (187)

No 1  
>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=1.6e-109  Score=820.58  Aligned_cols=480  Identities=59%  Similarity=0.957  Sum_probs=463.3

Q ss_pred             cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (502)
Q Consensus        22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (502)
                      .++||||+|+++.++++++++||.||++++++..++.+||+.+|++||+||+.+.|++++..+|.++|++++++++++++
T Consensus        21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~  100 (501)
T KOG2450|consen   21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD  100 (501)
T ss_pred             hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence            47999999999989999999999999999999999999999999999999983349999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (502)
Q Consensus       102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~  181 (502)
                      .|+.+.+.+.|||..+++..++..+++.++|++.|++..++..++.......|+.++|+|||+.|.|||||+....|+++
T Consensus       101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKla  180 (501)
T KOG2450|consen  101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLA  180 (501)
T ss_pred             HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhh
Confidence            99999999999999988779999999999999999988877766666667899999999999999999999999999999


Q ss_pred             HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (502)
Q Consensus       182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~  261 (502)
                      |||++||+||+||++.+|+|+..++++++++|+|+|++|+|+|.|.+.+.+|.+|++|+.|.||||+.+|+.|++.++..
T Consensus       181 PALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~~  260 (501)
T KOG2450|consen  181 PALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAES  260 (501)
T ss_pred             hHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998866


Q ss_pred             CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhc-cccCCCCCCCC
Q 010735          262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPFDPAV  340 (502)
Q Consensus       262 ~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~~~~~~~  340 (502)
                      ++||+.+|+|||+|.||++|||++.|++.+.++.|+|+||.|++.+|+|||+++||+|+++++++..+ +++|||.++.+
T Consensus       261 n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~  340 (501)
T KOG2450|consen  261 NLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGT  340 (501)
T ss_pred             CCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCccc
Confidence            79999999999999999999999999999999999999999999999999999999999999999966 99999999999


Q ss_pred             cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735          341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS  420 (502)
Q Consensus       341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  420 (502)
                      .+||.+++.|++||.+||+.++++||++++||.+..+.|+|+.|||+.++.++|.+++||+||||+.|++|++.||+|++
T Consensus       341 ~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~  420 (501)
T KOG2450|consen  341 EQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIER  420 (501)
T ss_pred             ccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHHH
Confidence            99999999999999999999999999999999887678999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecCCCC
Q 010735          421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSP  500 (502)
Q Consensus       421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~~~  500 (502)
                      +|++.|||++.|||+|.++++++++++++|+||||++...+...||||+|+||+||+.|.+++++|++.|+|+++..+..
T Consensus       421 AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~~~~~~  500 (501)
T KOG2450|consen  421 ANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVKLPQKN  500 (501)
T ss_pred             hcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCccccHHHHhhcceeeEEEEeCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999887654


Q ss_pred             C
Q 010735          501 W  501 (502)
Q Consensus       501 ~  501 (502)
                      |
T Consensus       501 ~  501 (501)
T KOG2450|consen  501 S  501 (501)
T ss_pred             C
Confidence            3


No 2  
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=100.00  E-value=1.8e-105  Score=841.31  Aligned_cols=497  Identities=82%  Similarity=1.299  Sum_probs=465.5

Q ss_pred             CCccccccCCCCccc--ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 010735            6 SNGSCKSLFKMPEIK--FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA   83 (502)
Q Consensus         6 ~~~~~~~~~~~~~~~--~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~   83 (502)
                      |++.|.+..+..|.+  ..++||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+.+.|+.++.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~   82 (501)
T PLN02766          3 SNGNCGGASGVKVPEIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGF   82 (501)
T ss_pred             CCCCCCccccccCCCcccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHH
Confidence            678898888766544  567899999998766789999999999999999999999999999999999972249999999


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEE
Q 010735           84 ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVV  163 (502)
Q Consensus        84 ~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  163 (502)
                      +|.++|++++++|+++.++|++++++|+|||..++...|+..+++.+++++..+++..+...+...+...++.++|+|||
T Consensus        83 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV  162 (501)
T PLN02766         83 ERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVV  162 (501)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEeccceEE
Confidence            99999999999999999999999999999999976556999999999999988776655433322334567889999999


Q ss_pred             EEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEE
Q 010735          164 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS  243 (502)
Q Consensus       164 ~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~  243 (502)
                      ++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|++++++.+++..|+.||++|.|.
T Consensus       163 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~  242 (501)
T PLN02766        163 GHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVS  242 (501)
T ss_pred             EEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEE
Confidence            99999999999999999999999999999999999999999999999999999999999997778899999999999999


Q ss_pred             EcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHH
Q 010735          244 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL  323 (502)
Q Consensus       244 ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l  323 (502)
                      ||||+.+|+.|++.++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus       243 FTGS~~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l  322 (501)
T PLN02766        243 FTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKL  322 (501)
T ss_pred             EECcHHHHHHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHH
Confidence            99999999999998873478999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceee
Q 010735          324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG  403 (502)
Q Consensus       324 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg  403 (502)
                      +++++++++|+|.++++++||++++.+++++.++|++++.+|+++++||......|+|++|||+.+++++|++++||+||
T Consensus       323 ~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FG  402 (501)
T PLN02766        323 VEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFG  402 (501)
T ss_pred             HHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccC
Confidence            99999999999999999999999999999999999999999999999997654468999999999999999999999999


Q ss_pred             ceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHH
Q 010735          404 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESL  483 (502)
Q Consensus       404 Pvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~  483 (502)
                      ||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+
T Consensus       403 PVl~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l  482 (501)
T PLN02766        403 PVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDAL  482 (501)
T ss_pred             ceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHH
Confidence            99999999999999999999999999999999999999999999999999999877778899999999999999999999


Q ss_pred             HhhhhccEEEEecCCCCCC
Q 010735          484 HNYLQVKSVVTPIFNSPWL  502 (502)
Q Consensus       484 ~~~~~~k~v~~~~~~~~~~  502 (502)
                      ++|+++|++++.+.+.||+
T Consensus       483 ~~ft~~k~v~~~~~~~~~~  501 (501)
T PLN02766        483 DKYLQVKSVVTPLYNSPWL  501 (501)
T ss_pred             HHHhceEEEEEeccccccC
Confidence            9999999999999999996


No 3  
>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=7.3e-106  Score=759.02  Aligned_cols=471  Identities=38%  Similarity=0.661  Sum_probs=452.3

Q ss_pred             ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 010735           21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA  100 (502)
Q Consensus        21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  100 (502)
                      ..+.||+|+|+++.++++|+|.||++||.|+.++..+.++.+.|++.|.+||+  .|+.++..+|.++|+++.++|.+|.
T Consensus        23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~--s~~~~takeRs~lLrkwy~Li~en~  100 (503)
T KOG2451|consen   23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFK--SYRNLTAKERSALLRKWYELIMENK  100 (503)
T ss_pred             chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhch
Confidence            45689999999998889999999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhh
Q 010735          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMK  179 (502)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~  179 (502)
                      ++|++++++|.|||+.|+ .+||..+..++++|+..++++.|+..+.. +.....+.++|+||+++|+|||||......+
T Consensus       101 ddLa~iiTlE~GKpL~eA-~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK  179 (503)
T KOG2451|consen  101 DDLATIITLENGKPLGEA-KGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRK  179 (503)
T ss_pred             HHHHHHHhhhcCCchhhc-cceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhH
Confidence            999999999999999975 78999999999999999999999876643 5567789999999999999999999999999


Q ss_pred             HHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCC---chhHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735          180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF---GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ  256 (502)
Q Consensus       180 i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~---~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~  256 (502)
                      ..+||++||+||+||++++|++++.++++..+||+|+|++|+++++   ..+.++.|+.+|+|+.|+||||+.+|+.+++
T Consensus       180 ~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~  259 (503)
T KOG2451|consen  180 AGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMA  259 (503)
T ss_pred             HHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHH
Confidence            9999999999999999999999999999999999999999999963   4578999999999999999999999999999


Q ss_pred             HHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCC
Q 010735          257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF  336 (502)
Q Consensus       257 ~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~  336 (502)
                      +++ .+.|++.+|||||.|+||++|||+|.|++..+..+|.++||.|.+.+|+|||+++||+|+..|.++++++++||.+
T Consensus       260 qsa-stvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~  338 (503)
T KOG2451|consen  260 QSA-STVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGL  338 (503)
T ss_pred             hhh-hhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCC
Confidence            988 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHH
Q 010735          337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE  415 (502)
Q Consensus       337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~  415 (502)
                      ++++..||||+..+.+++.++++||+++|+++++||+... ..++|++|||+.+++.+|-+..||+|||+.+|++|+|.|
T Consensus       339 ~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdtee  418 (503)
T KOG2451|consen  339 DPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEE  418 (503)
T ss_pred             CCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHH
Confidence            9999999999999999999999999999999999999543 345999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735          416 EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       416 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~  495 (502)
                      |+|+++|+++.||++|+||+|..+..+++++|++|+|.+|.-...+...||||+|+||+||+++++|+++|+..|.+.+.
T Consensus       419 Evi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgskyGidey~~ik~icig  498 (503)
T KOG2451|consen  419 EVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIG  498 (503)
T ss_pred             HHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCccccccchhhhhhhheeeec
Confidence            99999999999999999999999999999999999999999888889999999999999999999999999999988764


No 4  
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=100.00  E-value=1.7e-104  Score=829.15  Aligned_cols=469  Identities=36%  Similarity=0.654  Sum_probs=443.5

Q ss_pred             ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (502)
Q Consensus        23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (502)
                      ++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+  .|+.+|.++|.++|++++++|++++++
T Consensus        12 ~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~e   89 (482)
T PRK11241         12 QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERANILRRWFNLMMEHQDD   89 (482)
T ss_pred             cceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence            479999999866678999999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (502)
Q Consensus       103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~  181 (502)
                      |++++++|+|||+.++ ..|+..+++.+++++.++++..+...+.. .+...+++++|+|||++|+|||||+..++++++
T Consensus        90 la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~  168 (482)
T PRK11241         90 LARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAG  168 (482)
T ss_pred             HHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHH
Confidence            9999999999999975 57999999999999988876655433321 234467899999999999999999999999999


Q ss_pred             HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (502)
Q Consensus       182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~  261 (502)
                      +||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.||++|.|+||||+++|+.|++.++ .
T Consensus       169 ~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa-~  247 (482)
T PRK11241        169 PALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA-K  247 (482)
T ss_pred             HHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-h
Confidence            999999999999999999999999999999999999999999977778999999999999999999999999999987 7


Q ss_pred             CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCc
Q 010735          262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR  341 (502)
Q Consensus       262 ~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~  341 (502)
                      +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++++
T Consensus       248 ~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~  327 (482)
T PRK11241        248 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVT  327 (482)
T ss_pred             cCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHH
Q 010735          342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSA  421 (502)
Q Consensus       342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~  421 (502)
                      +||++++.+++++++++++++++|+++++||.....+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus       328 ~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~a  407 (482)
T PRK11241        328 IGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQA  407 (482)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHh
Confidence            99999999999999999999999999999997643368999999999999999999999999999999999999999999


Q ss_pred             hcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735          422 NNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       422 n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~  495 (502)
                      |+++|||++||||+|.+.++++++++++|.||||++....+.+||||+|.||+|+++|.+|+++|++.|++++.
T Consensus       408 N~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~~  481 (482)
T PRK11241        408 NDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG  481 (482)
T ss_pred             hCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCcccHHHHHHHhhcceEEEEe
Confidence            99999999999999999999999999999999999876667789999999999999999999999999998754


No 5  
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=100.00  E-value=3.3e-103  Score=827.05  Aligned_cols=481  Identities=58%  Similarity=0.995  Sum_probs=454.3

Q ss_pred             cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (502)
Q Consensus        22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (502)
                      .++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+++.|+.++.++|.++|++++++|+++.+
T Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  137 (538)
T PLN02466         58 TQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHND  137 (538)
T ss_pred             ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence            35799999998767889999999999999999999999999999999999972249999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (502)
Q Consensus       102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~  181 (502)
                      +|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...++.++|+|||++|+|||||+...+++++
T Consensus       138 ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~  217 (538)
T PLN02466        138 ELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG  217 (538)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceEEEEECCCchHHHHHHHHHh
Confidence            99999999999999977567999999999999998877666544432333467899999999999999999999999999


Q ss_pred             HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (502)
Q Consensus       182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~  261 (502)
                      +||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|++.+++..|+.||++|.|.||||+++|+.|++.++..
T Consensus       218 pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~  297 (538)
T PLN02466        218 PALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKS  297 (538)
T ss_pred             HHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999997777899999999999999999999999999988744


Q ss_pred             CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCc
Q 010735          262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR  341 (502)
Q Consensus       262 ~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~  341 (502)
                      ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.++++|+|.+++++
T Consensus       298 ~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~  377 (538)
T PLN02466        298 NLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVE  377 (538)
T ss_pred             CCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCC
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHH
Q 010735          342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSA  421 (502)
Q Consensus       342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~  421 (502)
                      +||++++++++++++++++++.+|+++++||.....+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus       378 ~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~a  457 (538)
T PLN02466        378 QGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRA  457 (538)
T ss_pred             CccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHHH
Confidence            99999999999999999999999999999998754568999999999999999999999999999999999999999999


Q ss_pred             hcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecCCCCC
Q 010735          422 NNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPW  501 (502)
Q Consensus       422 n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~~~~  501 (502)
                      |+++|||+++|||+|.+.++++++++++|.|+||++...++.+||||+|.||+|+++|++|+++|++.|+++..+.+-.|
T Consensus       458 N~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~~~~~  537 (538)
T PLN02466        458 NNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKNPAW  537 (538)
T ss_pred             hCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeCCCCCC
Confidence            99999999999999999999999999999999999877778899999999999999999999999999999999999999


Q ss_pred             C
Q 010735          502 L  502 (502)
Q Consensus       502 ~  502 (502)
                      +
T Consensus       538 ~  538 (538)
T PLN02466        538 L  538 (538)
T ss_pred             C
Confidence            6


No 6  
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=100.00  E-value=2.4e-103  Score=813.76  Aligned_cols=466  Identities=50%  Similarity=0.819  Sum_probs=441.8

Q ss_pred             ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (502)
Q Consensus        23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (502)
                      ++||||+|++..+  +++++||+||+++++++.++.+|+++|+++|+.+|+  .|++++..+|.++|++++++|++|.++
T Consensus         2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~--~W~~~~~~eR~~iL~~~a~~l~~~~~e   77 (472)
T COG1012           2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLSAEERAAILRRIADLLEARAEE   77 (472)
T ss_pred             CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence            5799999998644  899999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP  182 (502)
Q Consensus       103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~  182 (502)
                      |++++++|+|||+.++. .|+..+++.++|++.++++..+...+.......+++++|+|||++|+|||||++..+++++|
T Consensus        78 la~~~~~e~Gk~i~ea~-~ei~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~ap  156 (472)
T COG1012          78 LAALITLETGKPISEAR-GEIARAADFIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAP  156 (472)
T ss_pred             HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccCCCCCcceEEEeecceEEEEECCCCCHHHHHHhhHHH
Confidence            99999999999999764 56999999999999999877665433333567899999999999999999999999999999


Q ss_pred             HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735          183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN  262 (502)
Q Consensus       183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~  262 (502)
                      ||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.+.++.|+.||+|++|+||||+.+|+.|++.++ ++
T Consensus       157 ALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa-~~  235 (472)
T COG1012         157 ALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA-AN  235 (472)
T ss_pred             HHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHh-hc
Confidence            99999999999999999999999999999999999999999977778999999999999999999999999999988 89


Q ss_pred             CCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhc-cccCCCCCCCCc
Q 010735          263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPFDPAVR  341 (502)
Q Consensus       263 ~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~~~~~~~~  341 (502)
                      +||+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|+++|.++ ++ +++||+.|+.++
T Consensus       236 ~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~  314 (472)
T COG1012         236 LKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTD  314 (472)
T ss_pred             CCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCc
Confidence            9999999999999999999999999999999999999999999999999999999999999999 66 899998899999


Q ss_pred             ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHH
Q 010735          342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSA  421 (502)
Q Consensus       342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~  421 (502)
                      +||+++..+++++.++|++++.+|++++.||.. .. |+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus       315 ~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~-~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lA  392 (472)
T COG1012         315 LGPLISEEQLDRVEGYIEDAVAEGARLLAGGKR-PG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELA  392 (472)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcC-CC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHH
Confidence            999999999999999999999999999999983 33 9999999999999999999999999999999999999999999


Q ss_pred             hcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecC
Q 010735          422 NNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF  497 (502)
Q Consensus       422 n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~  497 (502)
                      |+++|||+++|||+|..++.++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|++..++.
T Consensus       393 N~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~~  470 (472)
T COG1012         393 NDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKLG  470 (472)
T ss_pred             hCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEecC
Confidence            99999999999999999999999999999999999853  44779999999999999999999999999999988754


No 7  
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=100.00  E-value=8e-103  Score=822.69  Aligned_cols=481  Identities=33%  Similarity=0.460  Sum_probs=446.4

Q ss_pred             ccccCCCC----cccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 010735           10 CKSLFKMP----EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAER   85 (502)
Q Consensus        10 ~~~~~~~~----~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R   85 (502)
                      |++..+.+    +....++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+  .|+.++.++|
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR  175 (604)
T PLN02419         98 LSTSPEQSTQPQMPPRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFP--LWRNTPITTR  175 (604)
T ss_pred             hccCCCcccCcccccccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHH
Confidence            55544433    33455689999999875667899999999999999999999999999999999999  8999999999


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEE
Q 010735           86 RGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVG  164 (502)
Q Consensus        86 ~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~  164 (502)
                      .++|++++++|++++++|++++++|+|||+.++ ..|+..+++.+++++.+++...+...+. ..+...+++++|+|||+
T Consensus       176 ~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~ea-~~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~  254 (604)
T PLN02419        176 QRVMLKFQELIRKNMDKLAMNITTEQGKTLKDS-HGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCA  254 (604)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEE
Confidence            999999999999999999999999999999976 4699999999999999887665543332 13445688999999999


Q ss_pred             EEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEE
Q 010735          165 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF  244 (502)
Q Consensus       165 ~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~f  244 (502)
                      +|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ +.++.|+.|++||.|+|
T Consensus       255 ~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~-~~~~~L~~~~~Vd~V~F  333 (604)
T PLN02419        255 GICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSF  333 (604)
T ss_pred             EECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCCh-HHHHHHHhCCCCCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999954 67899999999999999


Q ss_pred             cCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHH
Q 010735          245 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV  324 (502)
Q Consensus       245 tGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~  324 (502)
                      |||+++|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +|+|+++|+
T Consensus       334 TGSt~vG~~I~~~Aa-~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~  411 (604)
T PLN02419        334 VGSNTAGMHIYARAA-AKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLV  411 (604)
T ss_pred             eCChHHHHHHHHHHh-ccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHH
Confidence            999999999999987 789999999999999999999999999999999999999999999999999999 899999999


Q ss_pred             HHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc----CCCCceEecEEEeeCCCCCcccccc
Q 010735          325 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GKKGYYIEPTIFTNVTEDMLIAKNE  400 (502)
Q Consensus       325 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E  400 (502)
                      ++++++++|+|.|+++++||++++.+++++.+++++|+.+|+++++||...    ..+|+|++|||+.+++++|.+++||
T Consensus       412 ~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eE  491 (604)
T PLN02419        412 ERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEE  491 (604)
T ss_pred             HHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCC
Confidence            999999999999999999999999999999999999999999999999752    1368999999999999999999999


Q ss_pred             eeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCCCCCCC--Cc
Q 010735          401 IFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFG--RD  477 (502)
Q Consensus       401 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g--~~  477 (502)
                      +||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+... ..+.+||||+|.||+|  ++
T Consensus       492 iFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~  571 (604)
T PLN02419        492 IFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNF  571 (604)
T ss_pred             CcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999998743 3478999999999999  79


Q ss_pred             chHHHHHhhhhccEEEEec
Q 010735          478 CGLESLHNYLQVKSVVTPI  496 (502)
Q Consensus       478 ~g~~~~~~~~~~k~v~~~~  496 (502)
                      +|.+|+++|++.|+|+++.
T Consensus       572 ~G~~gl~~ft~~K~v~~~~  590 (604)
T PLN02419        572 YGKAGVDFFTQIKLVTQKQ  590 (604)
T ss_pred             cHHHHHHHhhCeEEEEEcc
Confidence            9999999999999998765


No 8  
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=100.00  E-value=4.6e-102  Score=812.58  Aligned_cols=476  Identities=46%  Similarity=0.827  Sum_probs=445.9

Q ss_pred             cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735           20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH   99 (502)
Q Consensus        20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~   99 (502)
                      ...++||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+.+.|+.+|.++|.++|++++++|+++
T Consensus         4 ~~~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~   83 (486)
T cd07140           4 MPHQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEH   83 (486)
T ss_pred             cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHh
Confidence            34578999999986667889999999999999999999999999999999999721499999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc----cccccceeecCCeEEEEEcCCChhHHh
Q 010735          100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTM  175 (502)
Q Consensus       100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~  175 (502)
                      +++|++++++|+|||..++...|+..+++.+++++.++++..+...+..    .+...+.+++|+|||++|+|||||+..
T Consensus        84 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~  163 (486)
T cd07140          84 QEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMM  163 (486)
T ss_pred             HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHH
Confidence            9999999999999999976557999999999999998877655443321    122357889999999999999999999


Q ss_pred             hhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHH
Q 010735          176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM  255 (502)
Q Consensus       176 ~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~  255 (502)
                      .++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.++++.|+.||+|+.|.||||+.+|+.|+
T Consensus       164 ~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~  243 (486)
T cd07140         164 LAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIM  243 (486)
T ss_pred             HHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999997777899999999999999999999999999


Q ss_pred             HHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCC
Q 010735          256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP  335 (502)
Q Consensus       256 ~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~  335 (502)
                      +.++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       244 ~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p  323 (486)
T cd07140         244 KSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDP  323 (486)
T ss_pred             HHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCC
Confidence            99873378999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeC--C
Q 010735          336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--T  413 (502)
Q Consensus       336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~  413 (502)
                      .++++++||++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+  |
T Consensus       324 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~  403 (486)
T cd07140         324 LDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGD  403 (486)
T ss_pred             CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCC
Confidence            99999999999999999999999999999999999997654568999999999999999999999999999999998  6


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          414 VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       414 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      ++|||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus       404 ~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~  483 (486)
T cd07140         404 VDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVT  483 (486)
T ss_pred             HHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEE
Confidence            99999999999999999999999999999999999999999998777788999999999999999999999999999998


Q ss_pred             Ee
Q 010735          494 TP  495 (502)
Q Consensus       494 ~~  495 (502)
                      ++
T Consensus       484 ~~  485 (486)
T cd07140         484 IE  485 (486)
T ss_pred             Ee
Confidence            75


No 9  
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=100.00  E-value=1.1e-101  Score=807.72  Aligned_cols=468  Identities=37%  Similarity=0.645  Sum_probs=440.7

Q ss_pred             cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (502)
Q Consensus        22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (502)
                      .++||||+|+.+ ++.+++++||+||+++++++.++.+|+++++++|++||+  .|+.+|.++|.++|++++++|+++++
T Consensus         2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~   78 (472)
T TIGR03374         2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFA--EWGQTTPKARAECLLKLADVIEENAQ   78 (472)
T ss_pred             CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            368999999975 467899999999999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV  180 (502)
Q Consensus       102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i  180 (502)
                      +|++++++|+|||..++...|+..+++.+++++..++.+.+...+. ..+...++.++|+|||++|+|||||+..+++++
T Consensus        79 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~  158 (472)
T TIGR03374        79 VFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL  158 (472)
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHH
Confidence            9999999999999997655699999999999988776655432211 123456789999999999999999999999999


Q ss_pred             HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735          181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT  260 (502)
Q Consensus       181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~  260 (502)
                      ++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.++++.|+.||++|.|.||||+++|+.|++.++ 
T Consensus       159 ~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa-  236 (472)
T TIGR03374       159 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTA-  236 (472)
T ss_pred             HHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh-
Confidence            99999999999999999999999999999885 9999999999977788999999999999999999999999999987 


Q ss_pred             CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735          261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV  340 (502)
Q Consensus       261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~  340 (502)
                      .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus       237 ~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~  316 (472)
T TIGR03374       237 PSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDEST  316 (472)
T ss_pred             hcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735          341 RQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK  419 (502)
Q Consensus       341 ~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~  419 (502)
                      ++||+++..+++++.++|++++++| +++++||......|+|+.|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus       317 ~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~  396 (472)
T TIGR03374       317 ELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVN  396 (472)
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHH
Confidence            9999999999999999999999999 799999976544689999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735          420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT  494 (502)
Q Consensus       420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~  494 (502)
                      ++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|++++
T Consensus       397 ~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~  471 (472)
T TIGR03374       397 WANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV  471 (472)
T ss_pred             HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence            999999999999999999999999999999999999987777889999999999999999999999999999865


No 10 
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3),  which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=100.00  E-value=2.4e-101  Score=808.81  Aligned_cols=474  Identities=63%  Similarity=1.054  Sum_probs=445.4

Q ss_pred             ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 010735           21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA  100 (502)
Q Consensus        21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  100 (502)
                      ..++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.+.|+.++.++|.++|++++++|+++.
T Consensus         3 ~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~   82 (476)
T cd07142           3 HTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHA   82 (476)
T ss_pred             cccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhH
Confidence            34689999999866678899999999999999999999999999999999997113999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV  180 (502)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i  180 (502)
                      ++|++++++|+|||..++...|+..+++.+++++.++++..+...+.......++.++|+|||++|+|||||+...++++
T Consensus        83 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i  162 (476)
T cd07142          83 DELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKV  162 (476)
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeceeeEEEECCCccHHHHHHHHH
Confidence            99999999999999997655699999999999999887766554443223345788999999999999999999999999


Q ss_pred             HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735          181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT  260 (502)
Q Consensus       181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~  260 (502)
                      ++||++||+||+|||+.+|+++..+++++.++|+|+|+++++++++.++++.|+.||++|.|+||||+.+|+.|++.++.
T Consensus       163 ~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~  242 (476)
T cd07142         163 GPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAK  242 (476)
T ss_pred             HHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999777789999999999999999999999999999873


Q ss_pred             CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735          261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV  340 (502)
Q Consensus       261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~  340 (502)
                      .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++
T Consensus       243 ~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  322 (476)
T cd07142         243 SNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGV  322 (476)
T ss_pred             cCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence            37899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735          341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS  420 (502)
Q Consensus       341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  420 (502)
                      ++||++++.+++++.+++++++.+|+++++||.....+|+|+.|||+.++++++++++||+||||++|++|+|++|||++
T Consensus       323 ~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~  402 (476)
T cd07142         323 EQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKR  402 (476)
T ss_pred             cCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHHH
Confidence            99999999999999999999999999999999875557899999999999999999999999999999999999999999


Q ss_pred             HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735          421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT  494 (502)
Q Consensus       421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~  494 (502)
                      +|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++||+.|++++
T Consensus       403 ~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~  476 (476)
T cd07142         403 ANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVVM  476 (476)
T ss_pred             HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHhhheeEEeC
Confidence            99999999999999999999999999999999999987778889999999999999999999999999999863


No 11 
>PLN02278 succinic semialdehyde dehydrogenase
Probab=100.00  E-value=4.9e-101  Score=807.94  Aligned_cols=470  Identities=42%  Similarity=0.689  Sum_probs=443.9

Q ss_pred             cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (502)
Q Consensus        22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (502)
                      .++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+  .|+.+|.++|.++|++++++|+++.+
T Consensus        25 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~  102 (498)
T PLN02278         25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLTASERSKILRRWYDLIIANKE  102 (498)
T ss_pred             ccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            4689999999865678999999999999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKV  180 (502)
Q Consensus       102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i  180 (502)
                      +|++++++|+|||..++ ..|+..+++.+++++..++...+...+.. .+...+++++|+|||++|+|||||++..++++
T Consensus       103 ~la~~~~~e~Gk~~~~a-~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i  181 (498)
T PLN02278        103 DLAQLMTLEQGKPLKEA-IGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKV  181 (498)
T ss_pred             HHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHHHHHH
Confidence            99999999999999976 56999999999999988876655433322 23456788999999999999999999999999


Q ss_pred             HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735          181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT  260 (502)
Q Consensus       181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~  260 (502)
                      ++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++++.++.|+.||++|.|.||||+++|+.|++.++ 
T Consensus       182 ~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa-  260 (498)
T PLN02278        182 GPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAA-  260 (498)
T ss_pred             HHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHh-
Confidence            9999999999999999999999999999999999999999999977678899999999999999999999999999887 


Q ss_pred             CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735          261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV  340 (502)
Q Consensus       261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~  340 (502)
                      ..++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|+|.++++
T Consensus       261 ~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~  340 (498)
T PLN02278        261 ATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGV  340 (498)
T ss_pred             hcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735          341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS  420 (502)
Q Consensus       341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  420 (502)
                      ++||++++.+++++.+++++++.+|+++++||.....+|+|+.|||+.+++++|+++++|+||||++|++|+|+||||++
T Consensus       341 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~  420 (498)
T PLN02278        341 TQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAI  420 (498)
T ss_pred             cCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHH
Confidence            99999999999999999999999999999999765446899999999999999999999999999999999999999999


Q ss_pred             HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735          421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~  495 (502)
                      +|+++|||+++|||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|++|+++|++.|+|+++
T Consensus       421 ~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~  495 (498)
T PLN02278        421 ANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLG  495 (498)
T ss_pred             HhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhheeEEEEEe
Confidence            999999999999999999999999999999999999776667899999999999999999999999999999764


No 12 
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=100.00  E-value=4.6e-101  Score=806.92  Aligned_cols=468  Identities=40%  Similarity=0.692  Sum_probs=440.9

Q ss_pred             eeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735           24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEEHAEV  102 (502)
Q Consensus        24 ~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (502)
                      +||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++  . |++++.++|.++|++++++|++++++
T Consensus         2 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~e   79 (477)
T cd07113           2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV--SAWAKTTPAERGRILLRLADLIEQHGEE   79 (477)
T ss_pred             CeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhH--hhhccCCHHHHHHHHHHHHHHHHHCHHH
Confidence            68999999876677899999999999999999999999999999999998  5 99999999999999999999999999


Q ss_pred             HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc------cccccceeecCCeEEEEEcCCChhHHhh
Q 010735          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS------RALQGYTLREPIGVVGHIIPWNFPTTMF  176 (502)
Q Consensus       103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~P~Gvv~~i~p~n~P~~~~  176 (502)
                      |++++++|+|||..++...|+..+++.+++++.+++...+...+..      .+...+++++|+|||++|+|||||+...
T Consensus        80 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~  159 (477)
T cd07113          80 LAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIA  159 (477)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHH
Confidence            9999999999999976546999999999999988776554432111      1234578999999999999999999999


Q ss_pred             hhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735          177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ  256 (502)
Q Consensus       177 ~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~  256 (502)
                      ++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++. .+..|+.||++|+|.||||+++|+.|.+
T Consensus       160 ~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~~  238 (477)
T cd07113         160 VWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIGR  238 (477)
T ss_pred             HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999765 8899999999999999999999999999


Q ss_pred             HHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCC
Q 010735          257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF  336 (502)
Q Consensus       257 ~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~  336 (502)
                      .++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus       239 ~aa-~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~  317 (477)
T cd07113         239 QAA-SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPM  317 (477)
T ss_pred             HHH-hhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCC
Confidence            987 7899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHH
Q 010735          337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEE  416 (502)
Q Consensus       337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e  416 (502)
                      ++++++||++++.+++++.+++++++.+|+++++||....++|+|+.|||+.+++++|+++++|+||||++|++|+|+||
T Consensus       318 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~de  397 (477)
T cd07113         318 DESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEE  397 (477)
T ss_pred             CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHH
Confidence            99999999999999999999999999999999999976544689999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735          417 AIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       417 ai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~  495 (502)
                      ||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus       398 ai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~  476 (477)
T cd07113         398 LIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR  476 (477)
T ss_pred             HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence            9999999999999999999999999999999999999998777778899999999999999999999999999999765


No 13 
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=100.00  E-value=4.8e-101  Score=808.97  Aligned_cols=475  Identities=45%  Similarity=0.762  Sum_probs=447.5

Q ss_pred             ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735           19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (502)
Q Consensus        19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (502)
                      ++..++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++  .|+.++.++|.++|++++++|++
T Consensus         4 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~   81 (488)
T PRK13252          4 QPLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQK--IWAAMTAMERSRILRRAVDILRE   81 (488)
T ss_pred             CccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence            5667889999999866678999999999999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM  178 (502)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~  178 (502)
                      ++++|++++++|+|||..++...|+..+++.+++++.+++...+...+...+...+++++|+|||++|+|||||+..+++
T Consensus        82 ~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~  161 (488)
T PRK13252         82 RNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACW  161 (488)
T ss_pred             hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEEeeeeEEEEECCCchHHHHHHH
Confidence            99999999999999999977556999999999999988876655443332344567899999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735          179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA  258 (502)
Q Consensus       179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a  258 (502)
                      ++++||++||+||+|||+.+|.++..++++|.++|+|+|++|++++++. +++.|+.||++|.|+||||+++|+.|.+.+
T Consensus       162 ~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a  240 (488)
T PRK13252        162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAA  240 (488)
T ss_pred             HHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998665 889999999999999999999999999988


Q ss_pred             hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCC
Q 010735          259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP  338 (502)
Q Consensus       259 a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~  338 (502)
                      + ..++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus       241 a-~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~  319 (488)
T PRK13252        241 A-ASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDP  319 (488)
T ss_pred             h-hcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence            7 679999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCH
Q 010735          339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV  414 (502)
Q Consensus       339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~  414 (502)
                      ++++||++++.+++++++++++++.+|+++++||....    ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       320 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~  399 (488)
T PRK13252        320 ATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDE  399 (488)
T ss_pred             CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCH
Confidence            99999999999999999999999999999999996432    25899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735          415 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT  494 (502)
Q Consensus       415 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~  494 (502)
                      +|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus       400 ~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~  479 (488)
T PRK13252        400 DEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQV  479 (488)
T ss_pred             HHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEE
Confidence            99999999999999999999999999999999999999999977667789999999999999999999999999999988


Q ss_pred             ecC
Q 010735          495 PIF  497 (502)
Q Consensus       495 ~~~  497 (502)
                      .+.
T Consensus       480 ~~~  482 (488)
T PRK13252        480 EMG  482 (488)
T ss_pred             eCC
Confidence            753


No 14 
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=100.00  E-value=1.6e-100  Score=800.34  Aligned_cols=469  Identities=47%  Similarity=0.804  Sum_probs=442.8

Q ss_pred             ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (502)
Q Consensus        23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (502)
                      ++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+  .|+.+|.++|.++|++++++|++++++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~   79 (475)
T cd07117           2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK--TWRKTTVAERANILNKIADIIDENKEL   79 (475)
T ss_pred             CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence            479999999876678999999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP  182 (502)
Q Consensus       103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~  182 (502)
                      |++++++|+|||+.++...|+..+++.+++++.+++...+...+...+...+.+++|+|||++|+|||||+..+++++++
T Consensus        80 la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~  159 (475)
T cd07117          80 LAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAP  159 (475)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeEEEEeecceEEEECCCccHHHHHHHHHHH
Confidence            99999999999999876569999999999999877665554333223345678999999999999999999999999999


Q ss_pred             HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735          183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN  262 (502)
Q Consensus       183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~  262 (502)
                      ||++||+||+|||+.+|.++..+++++.++ +|+|++|++++++.+++..|+.|+++|.|+||||+.+|+.|.+.++ .+
T Consensus       160 AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~  237 (475)
T cd07117         160 ALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA-KK  237 (475)
T ss_pred             HHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-cc
Confidence            999999999999999999999999999886 9999999999977778999999999999999999999999999887 78


Q ss_pred             CCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcc
Q 010735          263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ  342 (502)
Q Consensus       263 ~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~  342 (502)
                      ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++
T Consensus       238 ~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~  317 (475)
T cd07117         238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQM  317 (475)
T ss_pred             CCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHH
Q 010735          343 GPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAI  418 (502)
Q Consensus       343 gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai  418 (502)
                      ||++++.+++++.+++++++.+|+++++||....    .+|+|++|||+.+++++|++++||+||||++|++|+|.||||
T Consensus       318 gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai  397 (475)
T cd07117         318 GAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVI  397 (475)
T ss_pred             cCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHH
Confidence            9999999999999999999999999999997642    358999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735          419 KSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       419 ~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~  495 (502)
                      +++|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||+|.||+|+++|.+|+++|++.|+++++
T Consensus       398 ~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~  474 (475)
T cd07117         398 DMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYID  474 (475)
T ss_pred             HHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEEe
Confidence            99999999999999999999999999999999999999877778899999999999999999999999999999764


No 15 
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=100.00  E-value=1.4e-100  Score=802.47  Aligned_cols=470  Identities=48%  Similarity=0.807  Sum_probs=444.8

Q ss_pred             ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (502)
Q Consensus        23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (502)
                      ++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+  .|+.+|.++|.++|++++++|++|.++
T Consensus         2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~   79 (480)
T cd07559           2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFK--TWGKTSVAERANILNKIADRIEENLEL   79 (480)
T ss_pred             CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence            579999999876778999999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP  182 (502)
Q Consensus       103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~  182 (502)
                      |++++++|+|||+.++...|+..+++.+++++.+++...+...+...+...++.++|+|||++|+|||||+..+++++++
T Consensus        80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~  159 (480)
T cd07559          80 LAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAP  159 (480)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence            99999999999999876679999999999999887765554333333445678999999999999999999999999999


Q ss_pred             HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735          183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN  262 (502)
Q Consensus       183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~  262 (502)
                      ||++||+||+|||+.+|+++..+++++.++ +|+|++|++++++.++++.|+.||++|.|.||||+.+|+.|++.++ ..
T Consensus       160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa-~~  237 (480)
T cd07559         160 ALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA-EN  237 (480)
T ss_pred             HHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-cc
Confidence            999999999999999999999999999996 9999999999977788999999999999999999999999999987 78


Q ss_pred             CCceEEecCCCCceEEccCC-----CHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735          263 LKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD  337 (502)
Q Consensus       263 ~~~~~~e~gG~~~~iV~~da-----dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~  337 (502)
                      ++|+++|+|||||+||++||     |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus       238 ~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~  317 (480)
T cd07559         238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLD  317 (480)
T ss_pred             CCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999999     9999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCC
Q 010735          338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT  413 (502)
Q Consensus       338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~  413 (502)
                      +++++||++++.+++++.+++++++.+|+++++||....    ..|+|+.|||+.+++++|+++++|+||||++|++|+|
T Consensus       318 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~  397 (480)
T cd07559         318 PETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKD  397 (480)
T ss_pred             CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCC
Confidence            999999999999999999999999999999999997643    3689999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          414 VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       414 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      ++|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|+++
T Consensus       398 ~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~  477 (480)
T cd07559         398 EEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNIL  477 (480)
T ss_pred             HHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEE
Confidence            99999999999999999999999999999999999999999988777788999999999999999999999999999998


Q ss_pred             Eec
Q 010735          494 TPI  496 (502)
Q Consensus       494 ~~~  496 (502)
                      +++
T Consensus       478 ~~~  480 (480)
T cd07559         478 VSY  480 (480)
T ss_pred             EeC
Confidence            753


No 16 
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=100.00  E-value=2.6e-100  Score=802.05  Aligned_cols=476  Identities=58%  Similarity=0.949  Sum_probs=447.4

Q ss_pred             ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHH
Q 010735           19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIE   97 (502)
Q Consensus        19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~~l~   97 (502)
                      ....++||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+.+ .|+.+|.++|.++|++++++|+
T Consensus         4 ~~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~   83 (481)
T cd07141           4 IKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIE   83 (481)
T ss_pred             cccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHH
Confidence            445678999999987667899999999999999999999999999999999999721 4999999999999999999999


Q ss_pred             HhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhh
Q 010735           98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (502)
Q Consensus        98 ~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~  177 (502)
                      ++.++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+.+++|+|||++|+|||||+..++
T Consensus        84 ~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~  163 (481)
T cd07141          84 RDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAA  163 (481)
T ss_pred             HhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEeceeEEEEEccChhHHHHHH
Confidence            99999999999999999976666799999999999999887776654433223446789999999999999999999999


Q ss_pred             hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (502)
Q Consensus       178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~  257 (502)
                      +++++||++||+||+|||+.+|+++..+++++.++|+|+|+++++++++.++++.|+.|+++|.|+||||+.+|+.|++.
T Consensus       164 ~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~  243 (481)
T cd07141         164 WKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQA  243 (481)
T ss_pred             HHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999777788999999999999999999999999998


Q ss_pred             HhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735          258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD  337 (502)
Q Consensus       258 aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~  337 (502)
                      ++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus       244 aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~  323 (481)
T cd07141         244 AGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFD  323 (481)
T ss_pred             hhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            77337899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHH
Q 010735          338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEA  417 (502)
Q Consensus       338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea  417 (502)
                      +++++||++++.+++++.+++++++.+|+++++||......|+|+.|||+.+++++|++++||+||||++|++|+|++||
T Consensus       324 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ea  403 (481)
T cd07141         324 PKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEV  403 (481)
T ss_pred             CCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHH
Confidence            99999999999999999999999999999999999875557899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735          418 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT  494 (502)
Q Consensus       418 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~  494 (502)
                      |+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++||++|++++
T Consensus       404 i~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~  480 (481)
T cd07141         404 IERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI  480 (481)
T ss_pred             HHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccchHHHHHHHhheEEEEE
Confidence            99999999999999999999999999999999999999987777889999999999999999999999999999875


No 17 
>PLN02467 betaine aldehyde dehydrogenase
Probab=100.00  E-value=1.1e-99  Score=797.10  Aligned_cols=473  Identities=46%  Similarity=0.778  Sum_probs=445.4

Q ss_pred             cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhc-----ccCCCCCCCHHHHHHHHHHHHH
Q 010735           20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF-----DHGPWPRFSGAERRGIMLKFAD   94 (502)
Q Consensus        20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~-----~~~~w~~~~~~~R~~~L~~~a~   94 (502)
                      ...++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||     +  .|+.++..+|.++|+++++
T Consensus         6 ~~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~--~W~~~~~~~R~~~L~~~a~   83 (503)
T PLN02467          6 PRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGK--DWARTTGAVRAKYLRAIAA   83 (503)
T ss_pred             CccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccc--hhhcCCHHHHHHHHHHHHH
Confidence            34578999999987667899999999999999999999999999999999999     8  8999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeee-ec--c-cccccceeecCCeEEEEEcCCC
Q 010735           95 LIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM--S-RALQGYTLREPIGVVGHIIPWN  170 (502)
Q Consensus        95 ~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~--~-~~~~~~~~~~P~Gvv~~i~p~n  170 (502)
                      +|++++++|++++++|+|||+.++. .|+..+++.+++++.+++++.+... +.  . .+...+++++|+|||++|+|||
T Consensus        84 ~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN  162 (503)
T PLN02467         84 KITERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWN  162 (503)
T ss_pred             HHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCC
Confidence            9999999999999999999999764 6999999999999998877655421 11  1 1234678999999999999999


Q ss_pred             hhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHH
Q 010735          171 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV  250 (502)
Q Consensus       171 ~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~  250 (502)
                      ||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.++.|+.|+++|.|.||||+.+
T Consensus       163 ~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~  242 (503)
T PLN02467        163 YPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTAT  242 (503)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHH
Confidence            99999999999999999999999999999999999999999999999999999977778999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcc
Q 010735          251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW  330 (502)
Q Consensus       251 g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~  330 (502)
                      |+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus       243 g~~v~~~aa-~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l  321 (503)
T PLN02467        243 GRKIMTAAA-QMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNI  321 (503)
T ss_pred             HHHHHHHHh-ccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhc
Confidence            999999987 7899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEE
Q 010735          331 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL  408 (502)
Q Consensus       331 ~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v  408 (502)
                      ++|+|.++++++||++++.+++++.+++++++.+|+++++||....  ..|+|+.|||+.+++++|++++||+||||++|
T Consensus       322 ~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v  401 (503)
T PLN02467        322 KISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCV  401 (503)
T ss_pred             CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEE
Confidence            9999999999999999999999999999999999999999997642  25899999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhh
Q 010735          409 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ  488 (502)
Q Consensus       409 ~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~  488 (502)
                      ++|+|.||||+++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++
T Consensus       402 ~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~  481 (503)
T PLN02467        402 KTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLS  481 (503)
T ss_pred             EeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhC
Confidence            99999999999999999999999999999999999999999999999977666789999999999999999999999999


Q ss_pred             ccEEEEec
Q 010735          489 VKSVVTPI  496 (502)
Q Consensus       489 ~k~v~~~~  496 (502)
                      .|+++...
T Consensus       482 ~k~i~~~~  489 (503)
T PLN02467        482 VKQVTKYI  489 (503)
T ss_pred             eEEEEEec
Confidence            99998864


No 18 
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=100.00  E-value=1.2e-99  Score=794.91  Aligned_cols=473  Identities=56%  Similarity=0.913  Sum_probs=445.3

Q ss_pred             cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHHhH
Q 010735           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP-RFSGAERRGIMLKFADLIEEHA  100 (502)
Q Consensus        22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~-~~~~~~R~~~L~~~a~~l~~~~  100 (502)
                      .++||||+|+.++++.++.++||+||+++++++.++.+|+++++++|++||+. .|+ .+|.++|.++|++++++|++++
T Consensus         7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~-~W~~~~~~~~R~~~L~~~a~~l~~~~   85 (481)
T cd07143           7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFET-DWGLKVSGSKRGRCLSKLADLMERNL   85 (481)
T ss_pred             cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhh-hhcccCCHHHHHHHHHHHHHHHHHhH
Confidence            46899999998766788999999999999999999999999999999999972 399 9999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV  180 (502)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i  180 (502)
                      ++|++++++|+|||..+....|+..+++.+++++.++++..+...+...+...++.++|+|||++|+|||||+..+++++
T Consensus        86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~  165 (481)
T cd07143          86 DYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI  165 (481)
T ss_pred             HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence            99999999999999976666799999999999999987665543332233456789999999999999999999999999


Q ss_pred             HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735          181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT  260 (502)
Q Consensus       181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~  260 (502)
                      ++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.++++.|+.||++|.|.||||+.+|+.|++.++.
T Consensus       166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~  245 (481)
T cd07143         166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK  245 (481)
T ss_pred             HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999777789999999999999999999999999998773


Q ss_pred             CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735          261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV  340 (502)
Q Consensus       261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~  340 (502)
                      ..++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|.++++
T Consensus       246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  325 (481)
T cd07143         246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDT  325 (481)
T ss_pred             hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence            36899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735          341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS  420 (502)
Q Consensus       341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  420 (502)
                      ++||++++.+++++.+++++++.+|+++++||......|+|+.|||+.++++++++++||+||||++|++|+|++|||++
T Consensus       326 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  405 (481)
T cd07143         326 FQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKR  405 (481)
T ss_pred             CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHH
Confidence            99999999999999999999999999999999875457899999999999999999999999999999999999999999


Q ss_pred             HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735          421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~  495 (502)
                      +|+++|||++||||+|.+.+.++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++||+.|+++++
T Consensus       406 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~  480 (481)
T cd07143         406 ANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN  480 (481)
T ss_pred             HhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEe
Confidence            999999999999999999999999999999999999877778899999999999999999999999999999764


No 19 
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=100.00  E-value=1.1e-99  Score=797.45  Aligned_cols=468  Identities=41%  Similarity=0.715  Sum_probs=439.6

Q ss_pred             ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEEHAE  101 (502)
Q Consensus        23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~~L~~~a~~l~~~~~  101 (502)
                      ++||||+|+.  ++.+++++||+||+++++++.++.+|+++++++|++||+  . |+++|.++|.++|++++++|+++.+
T Consensus         2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~   77 (481)
T TIGR03216         2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALK--GPWGKMTVAERADLLYAVADEIERRFD   77 (481)
T ss_pred             CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--hhHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence            5799999996  468899999999999999999999999999999999998  8 9999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc----cccccceeecCCeEEEEEcCCChhHHhhh
Q 010735          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (502)
Q Consensus       102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~  177 (502)
                      +|++++++|+|||..++...|+..+++.+++++..++...+...+..    .+...+.+++|+|||++|+|||||+...+
T Consensus        78 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~  157 (481)
T TIGR03216        78 DFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMT  157 (481)
T ss_pred             HHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHH
Confidence            99999999999999976556999999999999988766544432211    12345788999999999999999999999


Q ss_pred             hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCch-hHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQ  256 (502)
Q Consensus       178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~-~~~~~l~~~~~v~~V~ftGs~~~g~~i~~  256 (502)
                      +++++||++||+||+|||+.+|.++.++++++.++|+|+|++++++|++. +.++.|..||++|.|+||||+.+|+.|++
T Consensus       158 ~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~  237 (481)
T TIGR03216       158 WKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMK  237 (481)
T ss_pred             HHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998654 47888999999999999999999999999


Q ss_pred             HHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCC
Q 010735          257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF  336 (502)
Q Consensus       257 ~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~  336 (502)
                      .++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|.
T Consensus       238 ~aa-~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~  316 (481)
T TIGR03216       238 AAA-DGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPD  316 (481)
T ss_pred             HHh-cCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            987 7889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-----CCCceEecEEEeeCCCCCcccccceeeceEEEEEe
Q 010735          337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF  411 (502)
Q Consensus       337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~  411 (502)
                      ++++++||++++.+++++++++++++.+|+++++||....     .+|+|++|||+.+++++|++++||+||||++|++|
T Consensus       317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~  396 (481)
T TIGR03216       317 DPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPF  396 (481)
T ss_pred             CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEe
Confidence            9999999999999999999999999999999999997532     36899999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccE
Q 010735          412 KTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS  491 (502)
Q Consensus       412 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~  491 (502)
                      +|.+|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++|++.|+
T Consensus       397 ~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~  476 (481)
T TIGR03216       397 DSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTN  476 (481)
T ss_pred             CCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCchHHHHHHhhceEE
Confidence            99999999999999999999999999999999999999999999987777889999999999999999999999999999


Q ss_pred             EEEe
Q 010735          492 VVTP  495 (502)
Q Consensus       492 v~~~  495 (502)
                      ++++
T Consensus       477 v~~~  480 (481)
T TIGR03216       477 VCIK  480 (481)
T ss_pred             EEEe
Confidence            9765


No 20 
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=100.00  E-value=1.1e-99  Score=796.21  Aligned_cols=469  Identities=27%  Similarity=0.474  Sum_probs=437.5

Q ss_pred             ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 010735           21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA  100 (502)
Q Consensus        21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  100 (502)
                      ..++||||+|+.  ++.+++++||+||+++++++.++.+|+++|+++|++||+  .|++++.++|.++|++++++|+++.
T Consensus        20 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~   95 (508)
T PLN02315         20 NLGCYVGGEWRA--NGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK--IWMQVPAPKRGEIVRQIGDALRAKL   95 (508)
T ss_pred             ccCceECCEEec--CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHH
Confidence            346899999986  367899999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhh
Q 010735          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMK  179 (502)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~  179 (502)
                      ++|++++++|+|||+.++ ..|+..+++.++|++..++.+.+...+.. .+...+..++|+|||++|+|||||+..++++
T Consensus        96 ~~la~~~~~e~GK~~~~a-~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~  174 (508)
T PLN02315         96 DYLGRLVSLEMGKILAEG-IGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWN  174 (508)
T ss_pred             HHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence            999999999999999976 57999999999999988776655433322 2334567899999999999999999999999


Q ss_pred             HHHHHHcCCeEEEecCCCcHHHHHH----HHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHH
Q 010735          180 VSPALAAGCTMIVKPAEQTPLIALY----FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM  255 (502)
Q Consensus       180 i~~ALaaGN~vv~kps~~~~~~~~~----l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~  255 (502)
                      +++||++||+||+|||+.+|+++..    +.+++.++|+|+|++|++++ +.+.++.|+.||++|.|.||||+++|+.|+
T Consensus       175 ~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~  253 (508)
T PLN02315        175 ACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMVQ  253 (508)
T ss_pred             HhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence            9999999999999999999999887    67888999999999999998 777899999999999999999999999999


Q ss_pred             HHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCC
Q 010735          256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP  335 (502)
Q Consensus       256 ~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~  335 (502)
                      +.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus       254 ~~aa-~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p  332 (508)
T PLN02315        254 QTVN-ARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDP  332 (508)
T ss_pred             HHHH-hcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCC
Confidence            9877 778999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHH
Q 010735          336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE  415 (502)
Q Consensus       336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~  415 (502)
                      .++++++||+++..+++++.+++++++++|+++++||.....+|+|++|||+ +++++|++++||+||||++|++|+|+|
T Consensus       333 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~d  411 (508)
T PLN02315        333 LEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLE  411 (508)
T ss_pred             CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHH
Confidence            9999999999999999999999999999999999999765446899999999 699999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHh--hcceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735          416 EAIKSANNTRYGLAAGIMTKDLNVANTVSR--SIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV  492 (502)
Q Consensus       416 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~--~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v  492 (502)
                      |||+++|+++|||+++|||+|.+.++++++  ++++|.|+||+... ..+.+||||+|.||+|+++|.+|+++|++.|+|
T Consensus       412 eai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v  491 (508)
T PLN02315        412 EAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTC  491 (508)
T ss_pred             HHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHHHHHHHhhEEEE
Confidence            999999999999999999999999999985  79999999998654 347889999999999999999999999999999


Q ss_pred             EEecC
Q 010735          493 VTPIF  497 (502)
Q Consensus       493 ~~~~~  497 (502)
                      ++++.
T Consensus       492 ~~~~~  496 (508)
T PLN02315        492 TINYG  496 (508)
T ss_pred             EEecC
Confidence            88753


No 21 
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=100.00  E-value=2.5e-99  Score=796.55  Aligned_cols=470  Identities=44%  Similarity=0.744  Sum_probs=442.4

Q ss_pred             ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (502)
Q Consensus        23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (502)
                      ++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++  .|+.++.++|.++|++++++|++++++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~   79 (488)
T TIGR02299         2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFK--RWAELKAAERKRYLHKIADLIEQHADE   79 (488)
T ss_pred             CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence            579999999876678899999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhh-hhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD-KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (502)
Q Consensus       103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~  181 (502)
                      |++++++|+|||+.++. .|+..+++.++++++.++ ...+...+.. ....+.+++|+|||++|+|||||+...+++++
T Consensus        80 l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~  157 (488)
T TIGR02299        80 IAVLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPVD-THLNYTVRVPVGPVGLITPWNAPFMLSTWKIA  157 (488)
T ss_pred             HHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccCC-CceEEEEEEecceEEEECCCccHHHHHHHHHH
Confidence            99999999999999765 799999999999988776 3333333322 33457889999999999999999999999999


Q ss_pred             HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (502)
Q Consensus       182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~  261 (502)
                      +||++||+||+|||+.+|.++.++.++|.++|+|+|+++++++++++.++.|+.|+++|.|.||||+.+|+.|++.++ .
T Consensus       158 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa-~  236 (488)
T TIGR02299       158 PALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGA-D  236 (488)
T ss_pred             HHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHH-h
Confidence            999999999999999999999999999999999999999999877778899999999999999999999999999987 7


Q ss_pred             CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCc
Q 010735          262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR  341 (502)
Q Consensus       262 ~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~  341 (502)
                      .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++.
T Consensus       237 ~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~  316 (488)
T TIGR02299       237 TLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETE  316 (488)
T ss_pred             cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-------CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCH
Q 010735          342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV  414 (502)
Q Consensus       342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~  414 (502)
                      +||++++.+++++.+++++++.+|+++++||....       .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       317 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~  396 (488)
T TIGR02299       317 VGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDE  396 (488)
T ss_pred             CCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCH
Confidence            99999999999999999999999999999997532       25899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735          415 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT  494 (502)
Q Consensus       415 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~  494 (502)
                      +|||+++|+++|||++||||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|.+|+++|++.|++++
T Consensus       397 ~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~  476 (488)
T TIGR02299       397 EEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVAL  476 (488)
T ss_pred             HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceEEEEE
Confidence            99999999999999999999999999999999999999999987777789999999999999999999999999999998


Q ss_pred             ecC
Q 010735          495 PIF  497 (502)
Q Consensus       495 ~~~  497 (502)
                      +++
T Consensus       477 ~~~  479 (488)
T TIGR02299       477 ALG  479 (488)
T ss_pred             ecC
Confidence            763


No 22 
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=100.00  E-value=4.3e-99  Score=793.08  Aligned_cols=472  Identities=60%  Similarity=0.962  Sum_probs=445.3

Q ss_pred             ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHHHHHHHHHHH
Q 010735           21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP--RFSGAERRGIMLKFADLIEE   98 (502)
Q Consensus        21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~--~~~~~~R~~~L~~~a~~l~~   98 (502)
                      ..++||||+|+.++++.+++++||+||+++++++.++.+|++++++.|++||+  .|+  .++.++|.++|++++++|.+
T Consensus         3 ~~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~~~w~~~~~~~R~~~L~~~a~~l~~   80 (476)
T cd07091           3 PTGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFE--TGWWRKMDPRERGRLLNKLADLIER   80 (476)
T ss_pred             cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcc--cCccccCCHHHHHHHHHHHHHHHHH
Confidence            35789999999766678999999999999999999999999999999999999  654  99999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM  178 (502)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~  178 (502)
                      +.++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|||||+...++
T Consensus        81 ~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~  160 (476)
T cd07091          81 DRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAW  160 (476)
T ss_pred             hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeceeEEEEECCCcCHHHHHHH
Confidence            99999999999999999766667999999999999988776655544333445568899999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735          179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA  258 (502)
Q Consensus       179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a  258 (502)
                      ++++||++||+||+|||+.+|.++..++++|.++|+|+|+++++++++.++++.|+.|+++|.|.||||+.+|+.|++.+
T Consensus       161 ~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~a  240 (476)
T cd07091         161 KLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAA  240 (476)
T ss_pred             HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999997777889999999999999999999999999988


Q ss_pred             hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCC
Q 010735          259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP  338 (502)
Q Consensus       259 a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~  338 (502)
                      +..+++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++
T Consensus       241 a~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~  320 (476)
T cd07091         241 AKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDP  320 (476)
T ss_pred             HhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence            73388999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHH
Q 010735          339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAI  418 (502)
Q Consensus       339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai  418 (502)
                      ++++||++++.+++++.+++++++.+|+++++||..+...|+|++|||+.+++++|++++||+||||++|++|+|++||+
T Consensus       321 ~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai  400 (476)
T cd07091         321 DTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVI  400 (476)
T ss_pred             CCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHH
Confidence            99999999999999999999999999999999998765578999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735          419 KSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT  494 (502)
Q Consensus       419 ~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~  494 (502)
                      +++|+++|||+++|||+|.+.++++++++++|+|+||+++...+.+||||+|.||+|+++|.+|+++|++.|++++
T Consensus       401 ~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~  476 (476)
T cd07091         401 ERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVTI  476 (476)
T ss_pred             HHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhhceeEEeC
Confidence            9999999999999999999999999999999999999987777899999999999999999999999999999853


No 23 
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00  E-value=4.4e-99  Score=792.75  Aligned_cols=470  Identities=40%  Similarity=0.673  Sum_probs=443.4

Q ss_pred             cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (502)
Q Consensus        22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (502)
                      .++||||+|+.+ ++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|++++++|+++++
T Consensus         3 ~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~   79 (475)
T PRK13473          3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFP--EWSQTTPKERAEALLKLADAIEENAD   79 (475)
T ss_pred             ccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence            357999999875 568999999999999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV  180 (502)
Q Consensus       102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i  180 (502)
                      +|++++++|+|||..++...|+..+++.+++++..++.+.+...+. ..+...+++++|+|||++|+|||||+...++++
T Consensus        80 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i  159 (475)
T PRK13473         80 EFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKL  159 (475)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHH
Confidence            9999999999999987655699999999999998777665432221 123346788999999999999999999999999


Q ss_pred             HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735          181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT  260 (502)
Q Consensus       181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~  260 (502)
                      ++||++||+||+|||+.+|+++..+++++.++ +|+|++|++++++.+.+..|+.|+++|.|.||||+++|+.|.+.++ 
T Consensus       160 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa-  237 (475)
T PRK13473        160 APALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAA-  237 (475)
T ss_pred             HHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-
Confidence            99999999999999999999999999999999 9999999999977788999999999999999999999999999987 


Q ss_pred             CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735          261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV  340 (502)
Q Consensus       261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~  340 (502)
                      .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus       238 ~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~  317 (475)
T PRK13473        238 DSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDT  317 (475)
T ss_pred             hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735          341 RQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK  419 (502)
Q Consensus       341 ~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~  419 (502)
                      ++||++++.+++++.++++++..+| +++++||......|+|+.|||+.++++++++++||+||||++|++|+|+||||+
T Consensus       318 ~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~  397 (475)
T PRK13473        318 ELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVR  397 (475)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHH
Confidence            9999999999999999999999999 999999986544689999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735          420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI  496 (502)
Q Consensus       420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~  496 (502)
                      ++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++||+.|+++++|
T Consensus       398 ~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~~  474 (475)
T PRK13473        398 WANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVKH  474 (475)
T ss_pred             HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceEEEEEec
Confidence            99999999999999999999999999999999999998777788999999999999999999999999999998876


No 24 
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=100.00  E-value=5.4e-99  Score=793.28  Aligned_cols=473  Identities=53%  Similarity=0.890  Sum_probs=444.7

Q ss_pred             cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHH
Q 010735           20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEE   98 (502)
Q Consensus        20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~~L~~~a~~l~~   98 (502)
                      ...++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++  . |+.+|.++|.++|++++++|.+
T Consensus         6 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~--~~w~~~~~~~R~~iL~~~a~~l~~   83 (484)
T cd07144           6 QPTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE--SWWSKVTGEERGELLDKLADLVEK   83 (484)
T ss_pred             cCcCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhHhcCCHHHHHHHHHHHHHHHHH
Confidence            345689999999865567899999999999999999999999999999999998  6 8899999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM  178 (502)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~  178 (502)
                      ++++|++++++|+|||..+....|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|||||+..+++
T Consensus        84 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~  163 (484)
T cd07144          84 NRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAW  163 (484)
T ss_pred             hHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEecceEEEEECcCCCHHHHHHH
Confidence            99999999999999998765567999999999999998877755444333334467889999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735          179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA  258 (502)
Q Consensus       179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a  258 (502)
                      ++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|++++++.+.++.|+.||++|.|.||||+.+|+.|.+.+
T Consensus       164 ~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a  243 (484)
T cd07144         164 KLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAA  243 (484)
T ss_pred             HHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999997777899999999999999999999999999987


Q ss_pred             hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhc-cccCCCCC
Q 010735          259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPFD  337 (502)
Q Consensus       259 a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~~~~  337 (502)
                      + ..++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++++ +++|+|.+
T Consensus       244 ~-~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~  322 (484)
T cd07144         244 A-QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFD  322 (484)
T ss_pred             H-hcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCC
Confidence            7 788999999999999999999999999999999999999999999999999999999999999999985 89999999


Q ss_pred             CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCH
Q 010735          338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV  414 (502)
Q Consensus       338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~  414 (502)
                      +++++||++++.+++++.+++++++++|+++++||....   ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus       323 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~  402 (484)
T cd07144         323 DDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTY  402 (484)
T ss_pred             CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCH
Confidence            999999999999999999999999999999999997643   26899999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735          415 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT  494 (502)
Q Consensus       415 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~  494 (502)
                      +|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+|+.
T Consensus       403 ~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~  482 (484)
T cd07144         403 EEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHI  482 (484)
T ss_pred             HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEE
Confidence            99999999999999999999999999999999999999999987777889999999999999999999999999999976


Q ss_pred             e
Q 010735          495 P  495 (502)
Q Consensus       495 ~  495 (502)
                      +
T Consensus       483 ~  483 (484)
T cd07144         483 N  483 (484)
T ss_pred             e
Confidence            5


No 25 
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=100.00  E-value=4.7e-99  Score=792.12  Aligned_cols=467  Identities=43%  Similarity=0.709  Sum_probs=437.5

Q ss_pred             ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (502)
Q Consensus        23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (502)
                      ++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+  .|+.+|..+|.++|++++++|+++.++
T Consensus         2 ~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~   79 (479)
T cd07116           2 DNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKE--AWGKTSVAERANILNKIADRMEANLEM   79 (479)
T ss_pred             CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence            579999999876678999999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP  182 (502)
Q Consensus       103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~  182 (502)
                      |++++++|+|||+.++...|+..+++.+++++...+...+...+...+...+++++|+|||++|+|||||+...++++++
T Consensus        80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~  159 (479)
T cd07116          80 LAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP  159 (479)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecCCCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence            99999999999999765569999999999999887665544333333345678999999999999999999999999999


Q ss_pred             HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735          183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN  262 (502)
Q Consensus       183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~  262 (502)
                      ||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|.+.+.+..|+.||++|.|.||||+++|+.|++.++ ..
T Consensus       160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa-~~  237 (479)
T cd07116         160 ALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYAS-EN  237 (479)
T ss_pred             HHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH-cC
Confidence            999999999999999999999999999998 9999999999877778999999999999999999999999999987 77


Q ss_pred             CCceEEecCCCCceEEccC------CCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCC
Q 010735          263 LKPVSLELGGKSPLLIFDD------VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF  336 (502)
Q Consensus       263 ~~~~~~e~gG~~~~iV~~d------adl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~  336 (502)
                      ++|+++|+|||||+||++|      ||++.|++.++++. +|+||.|++++|||||++++|+|+++|.++++++++|+|.
T Consensus       238 ~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~  316 (479)
T cd07116         238 IIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPL  316 (479)
T ss_pred             CCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            9999999999999999987      79999999999864 6999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735          337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK  412 (502)
Q Consensus       337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~  412 (502)
                      ++++.+||++++.+++++++++++++.+|+++++||....    .+|+|+.|||+.+++ +|++++||+||||++|++|+
T Consensus       317 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~  395 (479)
T cd07116         317 DTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFK  395 (479)
T ss_pred             CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeC
Confidence            9999999999999999999999999999999999997642    258999999998874 99999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735          413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV  492 (502)
Q Consensus       413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v  492 (502)
                      |+||||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|++
T Consensus       396 ~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~  475 (479)
T cd07116         396 DEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNL  475 (479)
T ss_pred             CHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEE
Confidence            99999999999999999999999999999999999999999998877778899999999999999999999999999999


Q ss_pred             EEe
Q 010735          493 VTP  495 (502)
Q Consensus       493 ~~~  495 (502)
                      +++
T Consensus       476 ~~~  478 (479)
T cd07116         476 LVS  478 (479)
T ss_pred             EEe
Confidence            775


No 26 
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=100.00  E-value=1.3e-98  Score=789.20  Aligned_cols=468  Identities=37%  Similarity=0.568  Sum_probs=438.5

Q ss_pred             ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (502)
Q Consensus        23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (502)
                      ++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++  .|+.+|.++|.++|++++++|+++.++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e   79 (478)
T cd07085           2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP--AWSATPVLKRQQVMFKFRQLLEENLDE   79 (478)
T ss_pred             CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            579999999875668899999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (502)
Q Consensus       103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~  181 (502)
                      |++++++|+|||..++ ..|+..+++.+++++...+...++..+. ..+...+..++|+|||++|+|||||+...+++++
T Consensus        80 l~~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~  158 (478)
T cd07085          80 LARLITLEHGKTLADA-RGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFP  158 (478)
T ss_pred             HHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence            9999999999999975 5799999999999988766555544332 2234568999999999999999999999999999


Q ss_pred             HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (502)
Q Consensus       182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~  261 (502)
                      +||++||+||+|||+.+|+++..++++|.++|+|+|+++++++ +.+.++.|+.||++|.|.||||+.+|+.|++.++ .
T Consensus       159 ~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa-~  236 (478)
T cd07085         159 MAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAA-A  236 (478)
T ss_pred             HHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEec-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh-h
Confidence            9999999999999999999999999999999999999999998 4567899999999999999999999999999887 7


Q ss_pred             CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCc
Q 010735          262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR  341 (502)
Q Consensus       262 ~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~  341 (502)
                      .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++
T Consensus       237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~  316 (478)
T cd07085         237 NGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGAD  316 (478)
T ss_pred             cCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHH
Q 010735          342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEA  417 (502)
Q Consensus       342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea  417 (502)
                      +||++++.+++++.+++++++.+|+++++||....    .+|+|+.|||+.+++++|+++++|+||||++|++|+|+|||
T Consensus       317 ~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea  396 (478)
T cd07085         317 MGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEA  396 (478)
T ss_pred             cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHH
Confidence            99999999999999999999999999999997532    36899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCC--CcchHHHHHhhhhccEEEE
Q 010735          418 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFG--RDCGLESLHNYLQVKSVVT  494 (502)
Q Consensus       418 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g--~~~g~~~~~~~~~~k~v~~  494 (502)
                      |+++|+++|||++||||+|.++++++++++++|.|+||++... .+.+||||+|.||+|  +++|++|+++|++.|+|+.
T Consensus       397 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~  476 (478)
T cd07085         397 IAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTS  476 (478)
T ss_pred             HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEE
Confidence            9999999999999999999999999999999999999987543 367899999999999  5789999999999999976


Q ss_pred             e
Q 010735          495 P  495 (502)
Q Consensus       495 ~  495 (502)
                      +
T Consensus       477 ~  477 (478)
T cd07085         477 R  477 (478)
T ss_pred             e
Confidence            5


No 27 
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=100.00  E-value=2.2e-98  Score=788.79  Aligned_cols=473  Identities=47%  Similarity=0.789  Sum_probs=444.5

Q ss_pred             eEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010735           25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA  104 (502)
Q Consensus        25 ~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  104 (502)
                      ||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+++.|+.++..+|.++|++++++|++++++|+
T Consensus         1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   80 (482)
T cd07119           1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA   80 (482)
T ss_pred             CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            68999987656788999999999999999999999999999999999962249999999999999999999999999999


Q ss_pred             HHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHH
Q 010735          105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL  184 (502)
Q Consensus       105 ~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL  184 (502)
                      +++++|+|||..++. .|+..+++.+++++.+.++..+...+...+...+++++|+|||++|+|||||+...++++++||
T Consensus        81 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL  159 (482)
T cd07119          81 RLETLNTGKTLRESE-IDIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL  159 (482)
T ss_pred             HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence            999999999999764 6999999999999988876555443333445578999999999999999999999999999999


Q ss_pred             HcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCC
Q 010735          185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK  264 (502)
Q Consensus       185 aaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~  264 (502)
                      ++||+||+|||+.+|.++.+++++|.++|+|+|+++++++++.+.++.|+.||++|.|.||||+++|+.|+++++ .+++
T Consensus       160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa-~~~~  238 (482)
T cd07119         160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAA-GNVK  238 (482)
T ss_pred             hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCC
Confidence            999999999999999999999999999999999999999877678999999999999999999999999999987 7889


Q ss_pred             ceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccc
Q 010735          265 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP  344 (502)
Q Consensus       265 ~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp  344 (502)
                      |+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||
T Consensus       239 ~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gp  318 (482)
T cd07119         239 KVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGP  318 (482)
T ss_pred             cEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735          345 QVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS  420 (502)
Q Consensus       345 l~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  420 (502)
                      ++++.+++++++++++++++|+++++||....    ..|+|+.|||+.+++++|+++++|+||||++|++|+|+||||++
T Consensus       319 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~  398 (482)
T cd07119         319 LVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRL  398 (482)
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHH
Confidence            99999999999999999999999999997542    25899999999999999999999999999999999999999999


Q ss_pred             HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecCCC
Q 010735          421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNS  499 (502)
Q Consensus       421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~~  499 (502)
                      +|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|++++++...
T Consensus       399 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~~~~  477 (482)
T cd07119         399 ANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININLSPQ  477 (482)
T ss_pred             HhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEecCCC
Confidence            9999999999999999999999999999999999998777788999999999999999999999999999999887543


No 28 
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00  E-value=5.1e-98  Score=784.35  Aligned_cols=471  Identities=45%  Similarity=0.770  Sum_probs=442.3

Q ss_pred             ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (502)
Q Consensus        23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (502)
                      ++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.+.|+.+|.++|.++|++++++|+++.++
T Consensus        21 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~e  100 (494)
T PRK09847         21 RLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEE  100 (494)
T ss_pred             CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence            57999999987667889999999999999999999999999999999999721499999999999999999999999999


Q ss_pred             HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP  182 (502)
Q Consensus       103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~  182 (502)
                      |++++++|+|||+.++...|+..+++.+++++.++++..+...+...+...++.++|+|||++|+|||||++.+++++++
T Consensus       101 la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~  180 (494)
T PRK09847        101 LALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGP  180 (494)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEecceeEEEEECCCccHHHHHHHHHHH
Confidence            99999999999998765669999999999999988776555433333344678999999999999999999999999999


Q ss_pred             HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735          183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN  262 (502)
Q Consensus       183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~  262 (502)
                      ||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.+..|+.|+++|.|.||||+.+|+.|.+.++...
T Consensus       181 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~~  260 (494)
T PRK09847        181 ALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSN  260 (494)
T ss_pred             HHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhhC
Confidence            99999999999999999999999999999999999999999977788999999999999999999999999999876347


Q ss_pred             CCceEEecCCCCceEEccCC-CHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCc
Q 010735          263 LKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR  341 (502)
Q Consensus       263 ~~~~~~e~gG~~~~iV~~da-dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~  341 (502)
                      ++|+++|+|||||.||.+|+ |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++.+++|+|.++++.
T Consensus       261 ~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~  340 (494)
T PRK09847        261 MKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATT  340 (494)
T ss_pred             CCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence            89999999999999999997 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHH
Q 010735          342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSA  421 (502)
Q Consensus       342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~  421 (502)
                      +||++++.+++++.+++++++.+| ++++||.... .+.|++|||+.++++++++++||+||||++|++|+|++|||+++
T Consensus       341 ~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~~-~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~  418 (494)
T PRK09847        341 MGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAG-LAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLA  418 (494)
T ss_pred             CCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccCC-CCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHHHH
Confidence            999999999999999999999999 9999987643 57899999999999999999999999999999999999999999


Q ss_pred             hcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735          422 NNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       422 n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~  495 (502)
                      |+++|||+++|||+|.+.+.++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus       419 n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~  492 (494)
T PRK09847        419 NDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWIS  492 (494)
T ss_pred             hCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccchHHHHHHhhceEEEEEe
Confidence            99999999999999999999999999999999999877777899999999999999999999999999999764


No 29 
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=100.00  E-value=4e-98  Score=784.86  Aligned_cols=467  Identities=34%  Similarity=0.563  Sum_probs=439.3

Q ss_pred             eeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 010735           24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL  103 (502)
Q Consensus        24 ~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  103 (502)
                      +||||+|+.+. +.+++++||+||+++++++.++.+|+++++++|++|++  .|+.++.++|.++|++++++|+++.++|
T Consensus         1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el   77 (478)
T cd07086           1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFK--EWRKVPAPRRGEIVRQIGEALRKKKEAL   77 (478)
T ss_pred             CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            58999999864 67899999999999999999999999999999999999  8999999999999999999999999999


Q ss_pred             HHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735          104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP  182 (502)
Q Consensus       104 ~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~  182 (502)
                      ++++++|+|||..++ ..|+..+++.+++++...+.+.+...+.. .+...+++++|+|||++|+|||||+...++++++
T Consensus        78 a~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~  156 (478)
T cd07086          78 GRLVSLEMGKILPEG-LGEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAI  156 (478)
T ss_pred             HHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence            999999999999975 46999999999999988877655433321 2335678999999999999999999999999999


Q ss_pred             HHHcCCeEEEecCCCcHHHHHHHHHHHHHc----CCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735          183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA  258 (502)
Q Consensus       183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~a----GlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a  258 (502)
                      ||++||+||+|||+.+|.++..+++++.++    |+|+|+++++++++. ++..|..||++|.|.||||+.+|+.|++.+
T Consensus       157 ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~~a  235 (478)
T cd07086         157 ALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETV  235 (478)
T ss_pred             HHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence            999999999999999999999999999999    999999999998654 889999999999999999999999999988


Q ss_pred             hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCC
Q 010735          259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP  338 (502)
Q Consensus       259 a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~  338 (502)
                      + .+++|+++|+|||||+||++|||++.|++.|++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus       236 a-~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~  314 (478)
T cd07086         236 A-RRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDE  314 (478)
T ss_pred             h-ccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCC
Confidence            7 788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC--CCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHH
Q 010735          339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK--KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEE  416 (502)
Q Consensus       339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e  416 (502)
                      ++++||++++.+++++.+++++|+.+|+++++||.....  +|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus       315 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~de  394 (478)
T cd07086         315 GTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEE  394 (478)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHH
Confidence            999999999999999999999999999999999976543  589999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCceEEEecCCHHHHHHHHhh--cceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          417 AIKSANNTRYGLAAGIMTKDLNVANTVSRS--IRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       417 ai~~~n~~~~gl~~~v~t~d~~~~~~~~~~--l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      ||+++|+++|||+++|||+|.+.+++++++  +++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus       395 ai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~  474 (478)
T cd07086         395 AIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCT  474 (478)
T ss_pred             HHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceEEEE
Confidence            999999999999999999999999999999  9999999999765 4478999999999999999999999999999998


Q ss_pred             Eec
Q 010735          494 TPI  496 (502)
Q Consensus       494 ~~~  496 (502)
                      +++
T Consensus       475 ~~~  477 (478)
T cd07086         475 INY  477 (478)
T ss_pred             EeC
Confidence            764


No 30 
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=100.00  E-value=4.3e-98  Score=784.27  Aligned_cols=465  Identities=42%  Similarity=0.695  Sum_probs=437.1

Q ss_pred             ceeEcCeEeeCCCCCeEEeecCC-CCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735           23 KLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (502)
Q Consensus        23 ~~~i~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (502)
                      ++||||+|+.+.  ..++++||+ ||+++++++.++.+|++++++.|++||+  .|+.++.++|.++|++++++|+++.+
T Consensus         2 ~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~   77 (473)
T cd07097           2 RNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFP--AWRRTSPEARADILDKAGDELEARKE   77 (473)
T ss_pred             CceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            579999999752  357999999 5999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV  180 (502)
Q Consensus       102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i  180 (502)
                      +|++++++|+|||+.++ ..|+..+++.+++++...++..+...+. ..+...+++++|+|||++|+|||||+.++++++
T Consensus        78 ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i  156 (473)
T cd07097          78 ELARLLTREEGKTLPEA-RGEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKI  156 (473)
T ss_pred             HHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHH
Confidence            99999999999999976 4699999999999998877665543322 134456899999999999999999999999999


Q ss_pred             HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735          181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT  260 (502)
Q Consensus       181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~  260 (502)
                      ++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+++..|+.|+++|.|.||||+.+|+.|++.++ 
T Consensus       157 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-  235 (473)
T cd07097         157 APALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAA-  235 (473)
T ss_pred             HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-
Confidence            9999999999999999999999999999999999999999999977778999999999999999999999999999987 


Q ss_pred             CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735          261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV  340 (502)
Q Consensus       261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~  340 (502)
                      .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus       236 ~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~  315 (473)
T cd07097         236 ARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGV  315 (473)
T ss_pred             ccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHH
Q 010735          341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAI  418 (502)
Q Consensus       341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai  418 (502)
                      ++|||+++.+++++.+++++++.+|+++++||....  ..|+|++|||+.++++++++++||+||||++|++|+|++|||
T Consensus       316 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai  395 (473)
T cd07097         316 DIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEAL  395 (473)
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHH
Confidence            999999999999999999999999999999997643  258999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCCCCCCC-CcchHHHHHhhhhccEEE
Q 010735          419 KSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       419 ~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~k~v~  493 (502)
                      +++|+++|||+++|||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+| +++|++|+++|++.|+|+
T Consensus       396 ~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~  472 (473)
T cd07097         396 AIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVY  472 (473)
T ss_pred             HHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeEEe
Confidence            99999999999999999999999999999999999998764 3478999999999999 899999999999999985


No 31 
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=100.00  E-value=4.5e-98  Score=779.29  Aligned_cols=455  Identities=29%  Similarity=0.465  Sum_probs=427.4

Q ss_pred             CCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Q 010735           36 GKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH  115 (502)
Q Consensus        36 ~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~  115 (502)
                      .++++++||+||+++++++.++.+|++++++.|++||+  .|++++.++|.++|++++++|++|.++|++++++|+|||.
T Consensus         6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~   83 (462)
T PRK13968          6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFR--DWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPI   83 (462)
T ss_pred             CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCH
Confidence            46789999999999999999999999999999999999  8999999999999999999999999999999999999999


Q ss_pred             HHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecC
Q 010735          116 SWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA  195 (502)
Q Consensus       116 ~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps  195 (502)
                      .++ ..|+..+++.+++++...+...+.......+...+++++|+|||++|+|||||++.+++++++||++||+||+|||
T Consensus        84 ~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs  162 (462)
T PRK13968         84 NQA-RAEVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHA  162 (462)
T ss_pred             HHH-HHHHHHHHHHHHHHHHHHHHhhCCccccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence            976 4799999999999998776543322111123456889999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCc
Q 010735          196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP  275 (502)
Q Consensus       196 ~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~  275 (502)
                      +.+|+++.++++++.++|+|+|+++++++++.. ...++.||++|.|.||||+++|+.|++.++ ..++|+++|+|||||
T Consensus       163 ~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa-~~l~~~~lElGGk~p  240 (462)
T PRK13968        163 PNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGAQAG-AALKKCVLELGGSDP  240 (462)
T ss_pred             CcChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCcEEEecCCCCc
Confidence            999999999999999999999999999986544 455889999999999999999999999987 789999999999999


Q ss_pred             eEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHH
Q 010735          276 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIL  355 (502)
Q Consensus       276 ~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~  355 (502)
                      +||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.
T Consensus       241 ~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~  320 (462)
T PRK13968        241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELH  320 (462)
T ss_pred             eEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecC
Q 010735          356 SYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK  435 (502)
Q Consensus       356 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~  435 (502)
                      +++++++.+|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus       321 ~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~  400 (462)
T PRK13968        321 HQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTT  400 (462)
T ss_pred             HHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcC
Confidence            99999999999999999765445899999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735          436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       436 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~  495 (502)
                      |.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|++|+++|++.|+|+++
T Consensus       401 d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~  460 (462)
T PRK13968        401 DETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKD  460 (462)
T ss_pred             CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCchHHHHHHhcceeEEEEe
Confidence            999999999999999999999877778899999999999999999999999999999765


No 32 
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=100.00  E-value=4.5e-98  Score=783.52  Aligned_cols=463  Identities=46%  Similarity=0.792  Sum_probs=437.8

Q ss_pred             eEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010735           25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA  104 (502)
Q Consensus        25 ~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  104 (502)
                      ||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++|++  .|+.+|.++|.++|++++++|++++++|+
T Consensus         1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la   78 (467)
T TIGR01804         1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQG--EWASMTPEERGRILRRIAELIRERNEELA   78 (467)
T ss_pred             CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            6999999866678999999999999999999999999999999999999  89999999999999999999999999999


Q ss_pred             HHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHH
Q 010735          105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL  184 (502)
Q Consensus       105 ~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL  184 (502)
                      +++++|+|||..++...|+..+++.+++++..+++..+...+.......+..++|+|||++|+|||||+...++++++||
T Consensus        79 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL  158 (467)
T TIGR01804        79 KLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPAL  158 (467)
T ss_pred             HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHH
Confidence            99999999999976567999999999999988776555433322223467899999999999999999999999999999


Q ss_pred             HcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCC
Q 010735          185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK  264 (502)
Q Consensus       185 aaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~  264 (502)
                      ++||+||+|||+.+|.++..++++|.++|+|+|+++++++++.++++.|+.|+++|.|.||||+.+|+.|.+.++ .++|
T Consensus       159 aaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~-~~l~  237 (467)
T TIGR01804       159 AAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAA-DHLK  237 (467)
T ss_pred             hcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCC
Confidence            999999999999999999999999999999999999999876788999999999999999999999999999887 7889


Q ss_pred             ceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccc
Q 010735          265 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP  344 (502)
Q Consensus       265 ~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp  344 (502)
                      |+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||
T Consensus       238 ~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp  317 (467)
T TIGR01804       238 HVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGP  317 (467)
T ss_pred             cEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735          345 QVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS  420 (502)
Q Consensus       345 l~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  420 (502)
                      ++++.+++++.+++++++.+|+++++||....    ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus       318 li~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~  397 (467)
T TIGR01804       318 LISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIAR  397 (467)
T ss_pred             cCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHH
Confidence            99999999999999999999999999997543    25899999999999999999999999999999999999999999


Q ss_pred             HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhcc
Q 010735          421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK  490 (502)
Q Consensus       421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k  490 (502)
                      +|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|
T Consensus       398 ~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~  467 (467)
T TIGR01804       398 ANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKAGLAEYTEVK  467 (467)
T ss_pred             HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence            9999999999999999999999999999999999998777788999999999999999999999999875


No 33 
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=100.00  E-value=1e-97  Score=786.86  Aligned_cols=470  Identities=37%  Similarity=0.612  Sum_probs=441.5

Q ss_pred             ccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735           21 FTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH   99 (502)
Q Consensus        21 ~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~   99 (502)
                      ..++||||+|+.  ++.+++++||+| |+++++++.++.+|++++++.|++||+  .|+.++..+|.++|++++++|+++
T Consensus        32 ~~~~~i~g~~~~--~~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~  107 (512)
T cd07124          32 EYPLVIGGKEVR--TEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFP--TWRRTPPEERARLLLRAAALLRRR  107 (512)
T ss_pred             ccceeECCEEec--CCCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHC
Confidence            357899999997  357899999998 999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhh
Q 010735          100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK  179 (502)
Q Consensus       100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~  179 (502)
                      .++|++++++|+|||..++. .|+..+++.+++++.++++..+...+...+...+++++|+|||++|+|||||+...+++
T Consensus       108 ~~~la~~~~~e~Gk~~~ea~-~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~  186 (512)
T cd07124         108 RFELAAWMVLEVGKNWAEAD-ADVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGM  186 (512)
T ss_pred             HHHHHHHHHHHcCcCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecceEEEEECCCChHHHHHHHH
Confidence            99999999999999999764 69999999999999988776554433333456789999999999999999999999999


Q ss_pred             HHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735          180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA  259 (502)
Q Consensus       180 i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa  259 (502)
                      +++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||++|.|.||||+.+|+.|++.++
T Consensus       187 i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa  266 (512)
T cd07124         187 TTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAA  266 (512)
T ss_pred             HHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999977778999999999999999999999999999987


Q ss_pred             cC-----CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCC
Q 010735          260 TS-----NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD  334 (502)
Q Consensus       260 ~~-----~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~  334 (502)
                      ..     +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+
T Consensus       267 ~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~  346 (512)
T cd07124         267 KVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGD  346 (512)
T ss_pred             cccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCC
Confidence            32     6899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC--CCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735          335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK--KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK  412 (502)
Q Consensus       335 ~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~  412 (502)
                      |.|+++++||++++.+++++.++++++.. |+++++||..+..  +|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus       347 p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~  425 (512)
T cd07124         347 PEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAK  425 (512)
T ss_pred             CCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecC
Confidence            99999999999999999999999999988 8999999976542  68999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCC-CcchHHHHHhhhhc
Q 010735          413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGLESLHNYLQV  489 (502)
Q Consensus       413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~  489 (502)
                      |+||||+++|+++|||++||||+|.+.++++++++++|.|+||+...  ..+.+||||+|.||+| +++|.+|+++|+++
T Consensus       426 ~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~  505 (512)
T cd07124         426 DFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQP  505 (512)
T ss_pred             CHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccE
Confidence            99999999999999999999999999999999999999999998764  3367899999999999 88899999999999


Q ss_pred             cEEEEec
Q 010735          490 KSVVTPI  496 (502)
Q Consensus       490 k~v~~~~  496 (502)
                      |+|++++
T Consensus       506 k~v~~~~  512 (512)
T cd07124         506 KTVTENF  512 (512)
T ss_pred             EEEEEeC
Confidence            9998874


No 34 
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate.  Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid.  The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=100.00  E-value=1.2e-97  Score=779.76  Aligned_cols=464  Identities=31%  Similarity=0.521  Sum_probs=431.4

Q ss_pred             eEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010735           25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA  104 (502)
Q Consensus        25 ~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  104 (502)
                      +|||+|+.+  +.+++++||+||+++++++.++.+|++++++.|++|++  .|+++|.++|.++|++++++|++++++|+
T Consensus         2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la   77 (474)
T cd07130           2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFK--EWRDVPAPKRGEIVRQIGDALRKKKEALG   77 (474)
T ss_pred             eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            799999974  57899999999999999999999999999999999999  89999999999999999999999999999


Q ss_pred             HHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHH
Q 010735          105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA  183 (502)
Q Consensus       105 ~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A  183 (502)
                      +++++|+|||..++ ..|+..+++.+++++.+.+.+.+...+.. .+...+..++|+|||++|+|||||+..+++++++|
T Consensus        78 ~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A  156 (474)
T cd07130          78 KLVSLEMGKILPEG-LGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIA  156 (474)
T ss_pred             HHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHH
Confidence            99999999999976 57999999999999887665544333221 23445788999999999999999999999999999


Q ss_pred             HHcCCeEEEecCCCcHHHHHHHHHH----HHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735          184 LAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA  259 (502)
Q Consensus       184 LaaGN~vv~kps~~~~~~~~~l~~~----l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa  259 (502)
                      |++||+||+|||+.+|.++..++++    |.++|+|+|++++++++ .+.++.|+.|+++|+|.||||+++|+.|++.++
T Consensus       157 LaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa  235 (474)
T cd07130         157 LVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA  235 (474)
T ss_pred             HHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence            9999999999999999999887766    47999999999999984 457899999999999999999999999999887


Q ss_pred             cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735          260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA  339 (502)
Q Consensus       260 ~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~  339 (502)
                       .+.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++
T Consensus       236 -~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~  314 (474)
T cd07130         236 -ARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDG  314 (474)
T ss_pred             -hcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCC
Confidence             7889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735          340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK  419 (502)
Q Consensus       340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~  419 (502)
                      +++||++++.+++++.+++++|+++|+++++||.....+|+|++|||+.++++ |++++||+||||++|++|+|++|||+
T Consensus       315 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~  393 (474)
T cd07130         315 TLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIA  393 (474)
T ss_pred             CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHH
Confidence            99999999999999999999999999999999986544689999999987766 99999999999999999999999999


Q ss_pred             HHhcCCCCceEEEecCCHHHHHHHHhh--cceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735          420 SANNTRYGLAAGIMTKDLNVANTVSRS--IRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI  496 (502)
Q Consensus       420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~--l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~  496 (502)
                      ++|+++|||+++|||+|.+++++++++  +++|.|+||..+. ..+.+||||+|.||+|+++|++|+++|++.|++++++
T Consensus       394 ~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~~  473 (474)
T cd07130         394 WNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTINY  473 (474)
T ss_pred             HHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhheEEEEEec
Confidence            999999999999999999999999987  8999999998654 4578999999999999999999999999999988764


No 35 
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily.  Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans,  is a mitochondrial  homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=100.00  E-value=2e-97  Score=784.01  Aligned_cols=470  Identities=28%  Similarity=0.432  Sum_probs=434.7

Q ss_pred             ccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH-
Q 010735           21 FTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE-   98 (502)
Q Consensus        21 ~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~-   98 (502)
                      ..++||||+|+.+  +.+++++||+| |+++++++.++.+|+++++++|++||+  .|+++|..+|.++|++++++|++ 
T Consensus        32 ~~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~  107 (522)
T cd07123          32 EIPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARK--EWARMPFEDRAAIFLKAADLLSGK  107 (522)
T ss_pred             ccCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhh
Confidence            4568999999973  57899999995 999999999999999999999999999  89999999999999999999996 


Q ss_pred             hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCC-eEEEEEcCCChhHHhh
Q 010735           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPI-GVVGHIIPWNFPTTMF  176 (502)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~~  176 (502)
                      ++++|++++++|+|||+.++...|+..+++.+++++.++.+..+...+. ..+...++.++|+ |||++|+|||||+...
T Consensus       108 ~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~  187 (522)
T cd07123         108 YRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGG  187 (522)
T ss_pred             CHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHH
Confidence            8999999999999999997644578889999999998877654432221 1244568899998 9999999999999999


Q ss_pred             hhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735          177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ  256 (502)
Q Consensus       177 ~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~  256 (502)
                      .+++++|| +||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|++
T Consensus       188 ~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~  266 (522)
T cd07123         188 NLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWK  266 (522)
T ss_pred             HHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence            99999999 59999999999999999999999999999999999999977778999999999999999999999999999


Q ss_pred             HHhcCCCC------ceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcc
Q 010735          257 AAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW  330 (502)
Q Consensus       257 ~aa~~~~~------~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~  330 (502)
                      .++ .+++      ++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus       267 ~aa-~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l  345 (522)
T cd07123         267 QIG-ENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEI  345 (522)
T ss_pred             HHH-hhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhC
Confidence            987 6665      899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc-CCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEE
Q 010735          331 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM  409 (502)
Q Consensus       331 ~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~  409 (502)
                      ++|+|.|+++++||++++.+++++.++++++.++ |+++++||..+..+|+|++|||+.+++++|++++||+||||++|+
T Consensus       346 ~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~  425 (522)
T cd07123         346 KMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVY  425 (522)
T ss_pred             ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEE
Confidence            9999999999999999999999999999999999 999999997654468999999999999999999999999999999


Q ss_pred             EeCC--HHHHHHHHhcCC-CCceEEEecCCHHHHHHHHhhc--ceeEEEEcCcCCC--CCCCCcCCCCCCCCC-CcchHH
Q 010735          410 KFKT--VEEAIKSANNTR-YGLAAGIMTKDLNVANTVSRSI--RAGIIWINCYFAF--DSDCPYGGYKMSGFG-RDCGLE  481 (502)
Q Consensus       410 ~~~~--~~eai~~~n~~~-~gl~~~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~~--~~~~pfgG~~~SG~g-~~~g~~  481 (502)
                      +|+|  ++|||+++|++. |||++||||+|.+.++++++++  ++|.|+||+....  .+.+||||+|.||+| +++|++
T Consensus       426 ~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~  505 (522)
T cd07123         426 VYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPL  505 (522)
T ss_pred             EeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHH
Confidence            9994  799999999985 9999999999999999999997  5999999987653  367899999999996 999999


Q ss_pred             HHHhhhhccEEEEec
Q 010735          482 SLHNYLQVKSVVTPI  496 (502)
Q Consensus       482 ~~~~~~~~k~v~~~~  496 (502)
                      ++++|++.|+++...
T Consensus       506 ~l~~~~~~k~~~~~~  520 (522)
T cd07123         506 NLLRWVSPRTIKETF  520 (522)
T ss_pred             HHHHhcceEEEEEec
Confidence            999999999997754


No 36 
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=100.00  E-value=1.7e-97  Score=783.76  Aligned_cols=473  Identities=27%  Similarity=0.420  Sum_probs=437.2

Q ss_pred             cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH-
Q 010735           20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE-   97 (502)
Q Consensus        20 ~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~-   97 (502)
                      ...++||||+|+.+ ++.+++++||+| |+++++++.++.+|+++++++|++||+  .|+.+|..+|.++|++++++|+ 
T Consensus        30 ~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~k~a~~l~~  106 (533)
T TIGR01236        30 IEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKK--DWSALPFYDRAAIFLKAADLLSG  106 (533)
T ss_pred             eeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHh
Confidence            55678999999975 456899999997 899999999999999999999999999  8999999999999999999999 


Q ss_pred             HhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeee-ecccccccceeecCC-eEEEEEcCCChhHHh
Q 010735           98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KMSRALQGYTLREPI-GVVGHIIPWNFPTTM  175 (502)
Q Consensus        98 ~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~  175 (502)
                      +++++|++++++|+|||+.++...++..+++.+++++.++++..+... ....+..+++.++|+ |||++|+|||||+..
T Consensus       107 ~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~  186 (533)
T TIGR01236       107 PYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIA  186 (533)
T ss_pred             hcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHH
Confidence            599999999999999999976433499999999999988876654332 112344578899999 999999999999999


Q ss_pred             hhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHH
Q 010735          176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM  255 (502)
Q Consensus       176 ~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~  255 (502)
                      ..+++++|| +||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|+
T Consensus       187 ~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~  265 (533)
T TIGR01236       187 GNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLW  265 (533)
T ss_pred             HHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence            999999999 7999999999999999999999999999999999999997778899999999999999999999999999


Q ss_pred             HHHhcCCCC------ceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhc
Q 010735          256 QAAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA  329 (502)
Q Consensus       256 ~~aa~~~~~------~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~  329 (502)
                      +.++ ..++      ++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus       266 ~~aa-~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~  344 (533)
T TIGR01236       266 KWVA-SNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAE  344 (533)
T ss_pred             HHHH-hhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhc
Confidence            9987 6665      49999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC--CEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEE
Q 010735          330 WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG--ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA  407 (502)
Q Consensus       330 ~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~G--a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~  407 (502)
                      +++|+|.|+++++||++++.+++++.++++++..+|  +++++||......|+|++|||+.+++++|++++||+||||++
T Consensus       345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~  424 (533)
T TIGR01236       345 VKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLT  424 (533)
T ss_pred             CCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEE
Confidence            999999999999999999999999999999999987  799999976544689999999999999999999999999999


Q ss_pred             EEEeCC--HHHHHHHH-hcCCCCceEEEecCCHHHHHHHHhhcc--eeEEEEcCcCC--CCCCCCcCCCCCCCCC-Ccch
Q 010735          408 LMKFKT--VEEAIKSA-NNTRYGLAAGIMTKDLNVANTVSRSIR--AGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCG  479 (502)
Q Consensus       408 v~~~~~--~~eai~~~-n~~~~gl~~~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~--~~~~~pfgG~~~SG~g-~~~g  479 (502)
                      |++|+|  ++|||+++ |+++|||+++|||+|.+.+.+++++++  +|.|+||+...  ..+.+||||+|.||+| +++|
T Consensus       425 v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g  504 (533)
T TIGR01236       425 VYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGG  504 (533)
T ss_pred             EEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCC
Confidence            999998  59999999 889999999999999999999999977  99999998654  3368899999999998 9999


Q ss_pred             HHHHHhhhhccEEEEecC
Q 010735          480 LESLHNYLQVKSVVTPIF  497 (502)
Q Consensus       480 ~~~~~~~~~~k~v~~~~~  497 (502)
                      .+|+++|++.|+++....
T Consensus       505 ~~~l~~f~~~k~v~~~~~  522 (533)
T TIGR01236       505 PLNLLRWTSARSIKETFV  522 (533)
T ss_pred             HHHHHHhcceEEEEEEcc
Confidence            999999999999987653


No 37 
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00  E-value=1.5e-97  Score=774.37  Aligned_cols=451  Identities=32%  Similarity=0.538  Sum_probs=425.6

Q ss_pred             EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Q 010735           39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA  118 (502)
Q Consensus        39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~  118 (502)
                      ++++||+||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|++++++|++++++|++++++|+|||+.++
T Consensus         3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   80 (457)
T PRK09406          3 IATINPATGETVKTFTALTDDEVDAAIARAHARFR--DYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASA   80 (457)
T ss_pred             eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHH
Confidence            78899999999999999999999999999999999  8999999999999999999999999999999999999999976


Q ss_pred             hhccHHHHHHHHHHHHHhhhhhcCeeeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecC
Q 010735          119 KMGDIPGAANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA  195 (502)
Q Consensus       119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps  195 (502)
                       ..|+..+++.+++++..+++..+.....   ......+++++|+|||++|+|||||++.+++++++||++||+||+|||
T Consensus        81 -~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps  159 (457)
T PRK09406         81 -KAEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHA  159 (457)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECC
Confidence             5699999999999998876654332111   122356788999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCc
Q 010735          196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP  275 (502)
Q Consensus       196 ~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~  275 (502)
                      +.+|+++.++++++.++|+|+|+++++++ +.+.+..|+.|++++.|+||||+++|+.|++.++ ..+||+++|+|||||
T Consensus       160 ~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~-~~~~~~~lElGG~~~  237 (457)
T PRK09406        160 SNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAG-DEIKKTVLELGGSDP  237 (457)
T ss_pred             CcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHH-hcCCceeeecCCCCe
Confidence            99999999999999999999999999986 3456788999999999999999999999999877 789999999999999


Q ss_pred             eEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHH
Q 010735          276 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIL  355 (502)
Q Consensus       276 ~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~  355 (502)
                      +||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.
T Consensus       238 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~  317 (457)
T PRK09406        238 FIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVE  317 (457)
T ss_pred             eEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecC
Q 010735          356 SYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK  435 (502)
Q Consensus       356 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~  435 (502)
                      +++++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+
T Consensus       318 ~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~  397 (457)
T PRK09406        318 KQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTR  397 (457)
T ss_pred             HHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcC
Confidence            99999999999999999875557999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735          436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT  494 (502)
Q Consensus       436 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~  494 (502)
                      |.+.++++++++++|+|+||+++...+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus       398 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~  456 (457)
T PRK09406        398 DEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI  456 (457)
T ss_pred             CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence            99999999999999999999988777889999999999999999999999999999864


No 38 
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=100.00  E-value=3.4e-97  Score=778.13  Aligned_cols=465  Identities=43%  Similarity=0.696  Sum_probs=440.3

Q ss_pred             eEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010735           25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA  104 (502)
Q Consensus        25 ~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  104 (502)
                      ||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++|++  .|+.+|.++|.++|++++++|+++.++|+
T Consensus         1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~   78 (468)
T cd07088           1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQK--AWERLPAIERAAYLRKLADLIRENADELA   78 (468)
T ss_pred             CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            6999999765678999999999999999999999999999999999999  89999999999999999999999999999


Q ss_pred             HHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHH
Q 010735          105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA  183 (502)
Q Consensus       105 ~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A  183 (502)
                      +++++|+|||..++ ..|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+|||||+...++++++|
T Consensus        79 ~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A  157 (468)
T cd07088          79 KLIVEEQGKTLSLA-RVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPA  157 (468)
T ss_pred             HHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHH
Confidence            99999999999975 57999999999999988876655443322 24567889999999999999999999999999999


Q ss_pred             HHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCC
Q 010735          184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL  263 (502)
Q Consensus       184 LaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~  263 (502)
                      |++||+||+|||+.+|.++..++++|.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+.+|+.|++.++ .++
T Consensus       158 L~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa-~~~  236 (468)
T cd07088         158 LVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAA-ENI  236 (468)
T ss_pred             HHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcC
Confidence            9999999999999999999999999999999999999999977678899999999999999999999999999987 789


Q ss_pred             CceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCccc
Q 010735          264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG  343 (502)
Q Consensus       264 ~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~g  343 (502)
                      +|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++.+|
T Consensus       237 ~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g  316 (468)
T cd07088         237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMG  316 (468)
T ss_pred             CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHh
Q 010735          344 PQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSAN  422 (502)
Q Consensus       344 pl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n  422 (502)
                      |++++.+++++.+++++++.+|+++++||..+. ..|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|
T Consensus       317 pli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n  396 (468)
T cd07088         317 PLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELAN  396 (468)
T ss_pred             cccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHh
Confidence            999999999999999999999999999997653 3689999999999999999999999999999999999999999999


Q ss_pred             cCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          423 NTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       423 ~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      +++|||+++|||+|.+.++++++++++|.|+||++....+..||||+|.||+|+++|++|+++||+.|+|+
T Consensus       397 ~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~  467 (468)
T cd07088         397 DSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY  467 (468)
T ss_pred             CCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence            99999999999999999999999999999999998776667799999999999999999999999999985


No 39 
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=100.00  E-value=3.4e-97  Score=776.72  Aligned_cols=462  Identities=42%  Similarity=0.693  Sum_probs=436.1

Q ss_pred             eeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 010735           24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL  103 (502)
Q Consensus        24 ~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  103 (502)
                      +||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+  .|+.+|.++|.++|++++++|+++.++|
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l   78 (466)
T cd07138           1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVEERAALLERIAEAYEARADEL   78 (466)
T ss_pred             CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            58999999876678899999999999999999999999999999999999  8999999999999999999999999999


Q ss_pred             HHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHH
Q 010735          104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA  183 (502)
Q Consensus       104 ~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A  183 (502)
                      ++++++|+|||..++...|+..+++.+++++...+...+...    ....+..++|+|||++|+|||||+..+++++++|
T Consensus        79 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A  154 (466)
T cd07138          79 AQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPA  154 (466)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc----CceEEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence            999999999999877656899999999999887766543221    2245678999999999999999999999999999


Q ss_pred             HHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCC
Q 010735          184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL  263 (502)
Q Consensus       184 LaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~  263 (502)
                      |++||+||+|||+.+|+++..++++|.++|+|+|+++++++++.++++.|+.||+++.|.||||+.+|+.|.+.++ .++
T Consensus       155 LaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~  233 (466)
T cd07138         155 LAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAA-DTV  233 (466)
T ss_pred             HhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-ccC
Confidence            9999999999999999999999999999999999999999977778999999999999999999999999999987 778


Q ss_pred             CceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCccc
Q 010735          264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG  343 (502)
Q Consensus       264 ~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~g  343 (502)
                      +|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|
T Consensus       234 ~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g  313 (466)
T cd07138         234 KRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLG  313 (466)
T ss_pred             CeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735          344 PQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS  420 (502)
Q Consensus       344 pl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  420 (502)
                      |++++.+++++.+++++++++|+++++||....   ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus       314 pli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~  393 (466)
T cd07138         314 PLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAI  393 (466)
T ss_pred             ccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHH
Confidence            999999999999999999999999999996432   25899999999999999999999999999999999999999999


Q ss_pred             HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      +|+++|||+++|||+|.+.++++++++++|+|+||+.. ..+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus       394 ~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~  465 (466)
T cd07138         394 ANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ  465 (466)
T ss_pred             HhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence            99999999999999999999999999999999999864 5678999999999999999999999999999874


No 40 
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=100.00  E-value=6.5e-97  Score=773.77  Aligned_cols=461  Identities=39%  Similarity=0.629  Sum_probs=434.2

Q ss_pred             CeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 010735           28 GEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLE  107 (502)
Q Consensus        28 G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~  107 (502)
                      |+|+.+.++..++++||+||+++++++.++.+|++++++.|++|++  .|+.++..+|.++|++++++|++++++|++++
T Consensus         1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~   78 (465)
T cd07151           1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQK--EWAATLPQERAEILEKAAQILEERRDEIVEWL   78 (465)
T ss_pred             CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence            6787765667899999999999999999999999999999999999  89999999999999999999999999999999


Q ss_pred             HHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHc
Q 010735          108 ALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAA  186 (502)
Q Consensus       108 ~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaa  186 (502)
                      ++|+|||..++ ..|+..+++.+++++.+.++..+...+.. .+...+++++|+|||++|+|||||++..++++++||++
T Consensus        79 ~~e~Gk~~~~a-~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaa  157 (465)
T cd07151          79 IRESGSTRIKA-NIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALAL  157 (465)
T ss_pred             HHHcCCCHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHc
Confidence            99999999975 46999999999999987766654433321 34557789999999999999999999999999999999


Q ss_pred             CCeEEEecCCCcHHHH-HHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCc
Q 010735          187 GCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP  265 (502)
Q Consensus       187 GN~vv~kps~~~~~~~-~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~  265 (502)
                      ||+||+|||+.+|.++ ..+.+++.++|+|+|++|++++++.+++..|+.||.++.|.||||+.+|+.|++.++ .+++|
T Consensus       158 GN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~~~  236 (465)
T cd07151         158 GNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAG-RHLKK  236 (465)
T ss_pred             CCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCc
Confidence            9999999999999996 689999999999999999999877778899999999999999999999999999987 78999


Q ss_pred             eEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCccccc
Q 010735          266 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ  345 (502)
Q Consensus       266 ~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl  345 (502)
                      +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++.+||+
T Consensus       237 ~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl  316 (465)
T cd07151         237 VALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPL  316 (465)
T ss_pred             EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCC
Q 010735          346 VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR  425 (502)
Q Consensus       346 ~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~  425 (502)
                      +++.+++++.+++++++.+|+++++||..   .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus       317 i~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~  393 (465)
T cd07151         317 INESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTE  393 (465)
T ss_pred             cCHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCC
Confidence            99999999999999999999999999964   589999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735          426 YGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       426 ~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~  495 (502)
                      |||+++|||+|.++++++++++++|.|+||+.+.. .+.+||||+|.||+|+++|++|+++|++.|+++++
T Consensus       394 ~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~  464 (465)
T cd07151         394 YGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ  464 (465)
T ss_pred             ccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence            99999999999999999999999999999998765 46899999999999999999999999999998764


No 41 
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=100.00  E-value=6.1e-97  Score=772.77  Aligned_cols=459  Identities=44%  Similarity=0.735  Sum_probs=434.2

Q ss_pred             ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735           19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (502)
Q Consensus        19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (502)
                      ....++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|+++|+  .|+.+|.++|.++|++++++|++
T Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~   96 (480)
T cd07111          19 DRSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFE--SWSALPGHVRARHLYRIARHIQK   96 (480)
T ss_pred             cccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence            4456789999999865567899999999999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM  178 (502)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~  178 (502)
                      +.++|++++++|+|||+.++...|+..+++.+++++.+.+...          ..+..++|+|||++|+|||||+...++
T Consensus        97 ~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~----------~~~~~~~P~GVV~~I~PwN~P~~~~~~  166 (480)
T cd07111          97 HQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLD----------TELAGWKPVGVVGQIVPWNFPLLMLAW  166 (480)
T ss_pred             hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCcccceecceEEEECCCccHHHHHHH
Confidence            9999999999999999997755689999999998887765432          124568999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735          179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA  258 (502)
Q Consensus       179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a  258 (502)
                      ++++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++++ +.+..|+.|+++|.|.||||+.+|+.|.+.+
T Consensus       167 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~a  245 (480)
T cd07111         167 KICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRAT  245 (480)
T ss_pred             HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999855 6789999999999999999999999999998


Q ss_pred             hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCC
Q 010735          259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP  338 (502)
Q Consensus       259 a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~  338 (502)
                      + ..++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++
T Consensus       246 a-~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~  324 (480)
T cd07111         246 A-GTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDK  324 (480)
T ss_pred             h-ccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence            7 789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHH
Q 010735          339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAI  418 (502)
Q Consensus       339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai  418 (502)
                      ++++||++++.+++++.+++++++.+|+++++||......|+|+.|||+.+++++|++++||+||||++|++|+|++|||
T Consensus       325 ~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai  404 (480)
T cd07111         325 AIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAV  404 (480)
T ss_pred             CCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHH
Confidence            99999999999999999999999999999999987544468999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccE
Q 010735          419 KSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKS  491 (502)
Q Consensus       419 ~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~  491 (502)
                      +++|+++|||+++|||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|.+|+++|++.|+
T Consensus       405 ~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~  477 (480)
T cd07111         405 ALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYLRPSW  477 (480)
T ss_pred             HHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence            9999999999999999999999999999999999999987777889999999999999999999999999985


No 42 
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase  AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase  PDB structure,  3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase  AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=100.00  E-value=8.1e-97  Score=775.39  Aligned_cols=467  Identities=42%  Similarity=0.731  Sum_probs=437.0

Q ss_pred             eeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 010735           24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL  103 (502)
Q Consensus        24 ~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  103 (502)
                      +||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.+.|+.+|.++|.++|++++++|+++.++|
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el   80 (471)
T cd07139           1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL   80 (471)
T ss_pred             CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            48999999865567899999999999999999999999999999999998212999999999999999999999999999


Q ss_pred             HHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCee-eecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735          104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP  182 (502)
Q Consensus       104 ~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~  182 (502)
                      ++++++|+|||..++...|+..+++.+++++..++...+.. .+...+...+..++|+|||++|+|||||+...++++++
T Consensus        81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~  160 (471)
T cd07139          81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP  160 (471)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence            99999999999987666699999999999998876554322 22222345678999999999999999999999999999


Q ss_pred             HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735          183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN  262 (502)
Q Consensus       183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~  262 (502)
                      ||++||+||+|||+.+|+++..+.++|.++|+|+|+++++++ +.+.+..|+.|++++.|.||||+.+|+.|++.++ .+
T Consensus       161 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~-~~  238 (471)
T cd07139         161 ALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG-ER  238 (471)
T ss_pred             HHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hc
Confidence            999999999999999999999999999999999999999998 5568899999999999999999999999999887 78


Q ss_pred             CCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcc
Q 010735          263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ  342 (502)
Q Consensus       263 ~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~  342 (502)
                      ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++
T Consensus       239 ~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~  318 (471)
T cd07139         239 LARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQI  318 (471)
T ss_pred             CCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735          343 GPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS  420 (502)
Q Consensus       343 gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  420 (502)
                      ||++++.+++++.+++++++.+|+++++||....  ..|+|+.|||+.++++++++++||+||||++|++|+|+||||++
T Consensus       319 gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  398 (471)
T cd07139         319 GPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRI  398 (471)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHH
Confidence            9999999999999999999999999999997643  35899999999999999999999999999999999999999999


Q ss_pred             HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      +|+++|||+++|||+|.+.+.++++++++|.|+||++. ..+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus       399 ~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~  470 (471)
T cd07139         399 ANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY  470 (471)
T ss_pred             HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence            99999999999999999999999999999999999976 5678999999999999999999999999999985


No 43 
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=100.00  E-value=1.4e-96  Score=773.70  Aligned_cols=467  Identities=31%  Similarity=0.470  Sum_probs=431.9

Q ss_pred             ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (502)
Q Consensus        23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (502)
                      .+||||+|+.+ ++.+++++||+||+++++++.++.+|++++++.|++||+  .|+.+|..+|.++|++++++|+++.++
T Consensus         2 ~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e   78 (487)
T PRK09457          2 TLWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFP--AWARLSFEERQAIVERFAALLEENKEE   78 (487)
T ss_pred             CceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHhHHHH
Confidence            37999999975 467899999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP  182 (502)
Q Consensus       103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~  182 (502)
                      |++++++|+|||..++ ..|+..+++.+++++.+.....+.......+...+++++|+|||++|+|||||+..+++++++
T Consensus        79 la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~  157 (487)
T PRK09457         79 LAEVIARETGKPLWEA-ATEVTAMINKIAISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVP  157 (487)
T ss_pred             HHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHH
Confidence            9999999999999976 469999999999888776554443332223445688999999999999999999999999999


Q ss_pred             HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735          183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN  262 (502)
Q Consensus       183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~  262 (502)
                      ||++||+||+|||+.+|.++..+++++.++|+|+|+++++++ +.+.++.|+.||++|.|.||||+++|+.|++.++...
T Consensus       158 ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~  236 (487)
T PRK09457        158 ALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQP  236 (487)
T ss_pred             HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence            999999999999999999999999999999999999999998 5678999999999999999999999999999876455


Q ss_pred             CCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccH-HHHHHHHHHHHhccccCCCC-CCCC
Q 010735          263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGDPF-DPAV  340 (502)
Q Consensus       263 ~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~-~~~~  340 (502)
                      .+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|+|. ++++
T Consensus       237 ~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~  316 (487)
T PRK09457        237 EKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQP  316 (487)
T ss_pred             CCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCC
Confidence            678999999999999999999999999999999999999999999999999998 99999999999999999996 7889


Q ss_pred             cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735          341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS  420 (502)
Q Consensus       341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  420 (502)
                      ++||+++..+++++.+++++++.+|+++++||.....+|.|++|||+ +++++|++++||+||||++|++|+|+||||++
T Consensus       317 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~  395 (487)
T PRK09457        317 FMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRL  395 (487)
T ss_pred             ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence            99999999999999999999999999999988654446899999999 79999999999999999999999999999999


Q ss_pred             HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735          421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI  496 (502)
Q Consensus       421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~  496 (502)
                      +|+++|||+++|||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|..+ .+|++.|+++...
T Consensus       396 ~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~~  471 (487)
T PRK09457        396 ANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLES  471 (487)
T ss_pred             HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCchhH-hhheeeeEEEEec
Confidence            999999999999999999999999999999999998755 34678999999999999999555 5599999998875


No 44 
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=100.00  E-value=1.1e-96  Score=775.73  Aligned_cols=469  Identities=42%  Similarity=0.696  Sum_probs=440.4

Q ss_pred             eeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735           24 LFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (502)
Q Consensus        24 ~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (502)
                      +||||+|+.++++.+++++||+| ++++++++.++.+|++++++.|++|++  .|+.++.++|.++|++++++|.+++++
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~e   78 (478)
T cd07131           1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFP--EWRKVPAPRRAEYLFRAAELLKKRKEE   78 (478)
T ss_pred             CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            48999999765678999999999 689999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (502)
Q Consensus       103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~  181 (502)
                      |++++++|+|||+.++ ..|+..+++.+++++...+...+...+.. .+...+.+++|+|||++|+|||||+..++++++
T Consensus        79 la~~~~~e~Gk~~~~~-~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~  157 (478)
T cd07131          79 LARLVTREMGKPLAEG-RGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIF  157 (478)
T ss_pred             HHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHH
Confidence            9999999999999976 46999999999999888776555433321 233568999999999999999999999999999


Q ss_pred             HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (502)
Q Consensus       182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~  261 (502)
                      +||++||+||+|||+.+|+++..++++|.++|+|+|+++++++++.++++.|+.||++|.|+||||+.+|+.|++.++ .
T Consensus       158 ~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa-~  236 (478)
T cd07131         158 PALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCA-R  236 (478)
T ss_pred             HHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-h
Confidence            999999999999999999999999999999999999999999977778999999999999999999999999999887 7


Q ss_pred             CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCc
Q 010735          262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR  341 (502)
Q Consensus       262 ~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~  341 (502)
                      .++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.+++++
T Consensus       237 ~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~  316 (478)
T cd07131         237 PNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETD  316 (478)
T ss_pred             cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHH
Q 010735          342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEA  417 (502)
Q Consensus       342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea  417 (502)
                      +||++++.+++++++++++|+.+|+++++||....    .+|+|+.|||+.+++++++++++|+||||++|++|+|+|||
T Consensus       317 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~ea  396 (478)
T cd07131         317 MGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEA  396 (478)
T ss_pred             CCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHH
Confidence            99999999999999999999999999999997542    36899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCC-CcchHHHHHhhhhccEEEEe
Q 010735          418 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       418 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~k~v~~~  495 (502)
                      |+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+| +++|.+|+++|++.|+|+++
T Consensus       397 i~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~  476 (478)
T cd07131         397 IEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD  476 (478)
T ss_pred             HHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence            9999999999999999999999999999999999999997663 578999999999999 88899999999999999876


Q ss_pred             c
Q 010735          496 I  496 (502)
Q Consensus       496 ~  496 (502)
                      +
T Consensus       477 ~  477 (478)
T cd07131         477 Y  477 (478)
T ss_pred             C
Confidence            4


No 45 
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=100.00  E-value=8.5e-97  Score=778.88  Aligned_cols=470  Identities=31%  Similarity=0.564  Sum_probs=438.2

Q ss_pred             ccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735           21 FTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH   99 (502)
Q Consensus        21 ~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~   99 (502)
                      ..++||||+|+.+  +.++.++||+| |+++++++.++.+|++++++.|++|++  .|+.+|.++|.++|++++++|+++
T Consensus        32 ~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~  107 (511)
T TIGR01237        32 TYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFE--AWKKTPVRERAGILRKAAAIMERR  107 (511)
T ss_pred             ccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHC
Confidence            4468999999974  56799999994 999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735          100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFM  178 (502)
Q Consensus       100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~  178 (502)
                      +++|++++++|+|||+.++ ..|+..+++.+++++.+++...+...+. ..+...+++++|+|||++|+|||||+..+++
T Consensus       108 ~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~  186 (511)
T TIGR01237       108 RHELNALICLEVGKIIPEA-DAEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVG  186 (511)
T ss_pred             HHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHH
Confidence            9999999999999999975 5699999999999998887665433221 2344578889999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735          179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA  258 (502)
Q Consensus       179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a  258 (502)
                      ++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.++.|+.||+++.|.||||+.+|+.|++.+
T Consensus       187 ~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~a  266 (511)
T TIGR01237       187 MTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDA  266 (511)
T ss_pred             HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999997777899999999999999999999999999987


Q ss_pred             hc-----CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccC
Q 010735          259 AT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG  333 (502)
Q Consensus       259 a~-----~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g  333 (502)
                      +.     ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|
T Consensus       267 a~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g  346 (511)
T TIGR01237       267 AKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVG  346 (511)
T ss_pred             hcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCC
Confidence            63     3789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCC
Q 010735          334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT  413 (502)
Q Consensus       334 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~  413 (502)
                      +|.++++++||++++.+++++.+++++++++| ++++||......|+|+.|||+.+++++|++++||+||||++|++|+|
T Consensus       347 ~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~  425 (511)
T TIGR01237       347 PTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAAD  425 (511)
T ss_pred             CCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCC
Confidence            99999999999999999999999999999999 89999876544689999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC--CCCCCcCCCCCCCCCC-cchHHHHHhhhhcc
Q 010735          414 VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFGR-DCGLESLHNYLQVK  490 (502)
Q Consensus       414 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~g~-~~g~~~~~~~~~~k  490 (502)
                      +||||+++|+++|||+++|||+|.+.++++++++++|+|+||++...  .+.+||||+|.||+|+ ++|++++++|++.|
T Consensus       426 ~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k  505 (511)
T TIGR01237       426 FDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPK  505 (511)
T ss_pred             HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceE
Confidence            99999999999999999999999999999999999999999997653  3568999999999995 78999999999999


Q ss_pred             EEEEec
Q 010735          491 SVVTPI  496 (502)
Q Consensus       491 ~v~~~~  496 (502)
                      +++.++
T Consensus       506 ~v~~~~  511 (511)
T TIGR01237       506 TVTENI  511 (511)
T ss_pred             EEEEeC
Confidence            998764


No 46 
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=100.00  E-value=9.2e-97  Score=769.13  Aligned_cols=446  Identities=40%  Similarity=0.682  Sum_probs=422.5

Q ss_pred             eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (502)
Q Consensus        41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~  120 (502)
                      ++||+||+++++++.++.+|++.++++|++|++  .|+.+|.++|.++|++++++|+++.++|++++++|+|||..++ .
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~   77 (448)
T TIGR01780         1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFK--TWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEA-K   77 (448)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-H
Confidence            479999999999999999999999999999999  8999999999999999999999999999999999999999975 5


Q ss_pred             ccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcH
Q 010735          121 GDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP  199 (502)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~  199 (502)
                      .|+..+++.+++++...++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        78 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p  157 (448)
T TIGR01780        78 GEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTP  157 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccch
Confidence            7999999999999887766655433322 334456788999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCceEEEecCC-chhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEE
Q 010735          200 LIALYFAHLAKLAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI  278 (502)
Q Consensus       200 ~~~~~l~~~l~~aGlP~g~~~~v~g~-~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV  278 (502)
                      +++..++++|.++|+|+|++|+++++ +.+.++.|+.||+++.|.||||+.+|+.|++.++ ..++|+++|+|||||+||
T Consensus       158 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa-~~~~~~~lElGGk~~~iV  236 (448)
T TIGR01780       158 LSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSA-STVKKVSMELGGNAPFIV  236 (448)
T ss_pred             HHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCceEeecCCCCeeEE
Confidence            99999999999999999999999996 6778899999999999999999999999999987 778999999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHH
Q 010735          279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI  358 (502)
Q Consensus       279 ~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i  358 (502)
                      ++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.+++
T Consensus       237 ~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i  316 (448)
T TIGR01780       237 FDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHI  316 (448)
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 010735          359 EHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN  438 (502)
Q Consensus       359 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~  438 (502)
                      ++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+
T Consensus       317 ~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~  396 (448)
T TIGR01780       317 ADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLA  396 (448)
T ss_pred             HHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHH
Confidence            99999999999999765446899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhcc
Q 010735          439 VANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK  490 (502)
Q Consensus       439 ~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k  490 (502)
                      .++++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++|++.|
T Consensus       397 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k  448 (448)
T TIGR01780       397 TIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK  448 (448)
T ss_pred             HHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence            9999999999999999998777778999999999999999999999999976


No 47 
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=100.00  E-value=4e-96  Score=774.30  Aligned_cols=470  Identities=34%  Similarity=0.562  Sum_probs=436.9

Q ss_pred             cccceeEcCeEeeCCCCCeEEeecCC-CCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735           20 KFTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (502)
Q Consensus        20 ~~~~~~i~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (502)
                      ...++||||+|+.+  +.+++++||+ ||+++++++.++.+|++++++.|++||+  .|+.++.++|.++|++++++|++
T Consensus        35 ~~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~  110 (514)
T PRK03137         35 QDYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE--TWKKWSPEDRARILLRAAAIIRR  110 (514)
T ss_pred             cccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence            34568999999974  5789999999 6999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhc-CeeeecccccccceeecCCeEEEEEcCCChhHHhhh
Q 010735           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH-GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (502)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~  177 (502)
                      +.++|++++++|+|||+.++ ..|+..+++.+++++..+++.. +.......+...+++++|+|||++|+|||||+..++
T Consensus       111 ~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~  189 (514)
T PRK03137        111 RKHEFSAWLVKEAGKPWAEA-DADTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMA  189 (514)
T ss_pred             CHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHH
Confidence            99999999999999999976 4699999999999998876653 222222234567889999999999999999999999


Q ss_pred             hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (502)
Q Consensus       178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~  257 (502)
                      +++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.++.|+.||+++.|.||||+.+|+.|++.
T Consensus       190 ~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~  269 (514)
T PRK03137        190 GMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYER  269 (514)
T ss_pred             HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999777789999999999999999999999999999


Q ss_pred             Hhc-----CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc
Q 010735          258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV  332 (502)
Q Consensus       258 aa~-----~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~  332 (502)
                      ++.     .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus       270 aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~  349 (514)
T PRK03137        270 AAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTV  349 (514)
T ss_pred             HhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCC
Confidence            862     168999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735          333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK  412 (502)
Q Consensus       333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~  412 (502)
                      |+|.++. ++||++++.+++++.++++++.++ +++++||..+..+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus       350 g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~  427 (514)
T PRK03137        350 GNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAK  427 (514)
T ss_pred             CCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecC
Confidence            9999998 999999999999999999999887 59999997654468999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC--CCCCCcCCCCCCCCC-CcchHHHHHhhhhc
Q 010735          413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFG-RDCGLESLHNYLQV  489 (502)
Q Consensus       413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~  489 (502)
                      |++|||+++|+++|||++||||+|.+.++++++++++|+|+||+....  .+.+||||+|.||+| +++|.+++++|++.
T Consensus       428 ~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~  507 (514)
T PRK03137        428 DFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQA  507 (514)
T ss_pred             CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceE
Confidence            999999999999999999999999999999999999999999987543  356899999999999 69999999999999


Q ss_pred             cEEEEec
Q 010735          490 KSVVTPI  496 (502)
Q Consensus       490 k~v~~~~  496 (502)
                      |+|+..+
T Consensus       508 k~v~~~~  514 (514)
T PRK03137        508 KTVSEMF  514 (514)
T ss_pred             EEEEEeC
Confidence            9987653


No 48 
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=100.00  E-value=6e-96  Score=765.99  Aligned_cols=461  Identities=31%  Similarity=0.527  Sum_probs=429.4

Q ss_pred             cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (502)
Q Consensus        22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (502)
                      .++||||+|+.  ++.+++++||+||+++++++.++.+|+++++++|+++++     .++..+|.++|++++++|+++.+
T Consensus         4 ~~~~i~g~~~~--~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~~~~~~R~~~l~~~a~~l~~~~~   76 (472)
T TIGR03250         4 EALRIAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRP-----TLTRYERSAILDRAAALLAARKE   76 (472)
T ss_pred             CCceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHHHHHHHhHH
Confidence            46899999986  357899999999999999999999999999999988764     57899999999999999999999


Q ss_pred             HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-----ccccccceeecCC-eEEEEEcCCChhHHh
Q 010735          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGYTLREPI-GVVGHIIPWNFPTTM  175 (502)
Q Consensus       102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~  175 (502)
                      +|++++++|+|||..++ ..|+..+++.+++++..+.+..+...+.     ..+...++.++|+ |||++|+|||||++.
T Consensus        77 ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~  155 (472)
T TIGR03250        77 EISDLITLESGLSKKDS-LYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQ  155 (472)
T ss_pred             HHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHH
Confidence            99999999999999975 5699999999999998876654433211     1223467899998 999999999999999


Q ss_pred             hhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHH
Q 010735          176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM  255 (502)
Q Consensus       176 ~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~  255 (502)
                      +++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|++++.+.+.+..|+.||+++.|.||||+.+|+.|+
T Consensus       156 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~  235 (472)
T TIGR03250       156 VAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIA  235 (472)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999997677899999999999999999999999999


Q ss_pred             HHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCC
Q 010735          256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP  335 (502)
Q Consensus       256 ~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~  335 (502)
                      +.++   .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       236 ~~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p  312 (472)
T TIGR03250       236 ARAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDP  312 (472)
T ss_pred             HHhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCC
Confidence            9864   6899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHH
Q 010735          336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE  415 (502)
Q Consensus       336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~  415 (502)
                      .++++++||++++.+++++++++++++.+|+++++||..   .|+|++|||+.+++++|++++||+||||++|++|+|.+
T Consensus       313 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~  389 (472)
T TIGR03250       313 MDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDID  389 (472)
T ss_pred             CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHH
Confidence            999999999999999999999999999999999999965   58999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCC-CCCCcCCCCCCCCC-CcchHHHHHhhhhccEEE
Q 010735          416 EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       416 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~SG~g-~~~g~~~~~~~~~~k~v~  493 (502)
                      ||++++|+++|||++||||+|.++++++++++++|+|+||+..... +.+||||+|.||+| +++|.+|+++|++.|+++
T Consensus       390 eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~  469 (472)
T TIGR03250       390 DAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYS  469 (472)
T ss_pred             HHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhceEEEE
Confidence            9999999999999999999999999999999999999999876544 56899999999999 577899999999999998


Q ss_pred             Eec
Q 010735          494 TPI  496 (502)
Q Consensus       494 ~~~  496 (502)
                      +++
T Consensus       470 ~~~  472 (472)
T TIGR03250       470 LPW  472 (472)
T ss_pred             EeC
Confidence            764


No 49 
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=100.00  E-value=5.4e-96  Score=762.22  Aligned_cols=450  Identities=40%  Similarity=0.659  Sum_probs=424.1

Q ss_pred             eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (502)
Q Consensus        41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~  120 (502)
                      ++||+||+++++++.++.+|++++++.|++||+.+.|+. +..+|.++|++++++|++|+++|++++++|+|||..++ .
T Consensus         1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~   78 (455)
T cd07120           1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEA-R   78 (455)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-H
Confidence            479999999999999999999999999999998212998 99999999999999999999999999999999999976 4


Q ss_pred             ccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHH
Q 010735          121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL  200 (502)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~  200 (502)
                      .|+..+++.+++++.++++..+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus        79 ~Ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~  158 (455)
T cd07120          79 FEISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ  158 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence            69999999999999888776554433223445689999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHH-cCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEc
Q 010735          201 IALYFAHLAKL-AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF  279 (502)
Q Consensus       201 ~~~~l~~~l~~-aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~  279 (502)
                      ++..++++|.+ +|+|+|+++++++++.++++.|+.||+++.|.||||+.+|+.|++.++ .++||+++|+|||||+||+
T Consensus       159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~~~~~lElGG~~~~IV~  237 (455)
T cd07120         159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAA-PTLKRLGLELGGKTPCIVF  237 (455)
T ss_pred             HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeEEEECCCCCeeEEC
Confidence            99999999999 799999999999877778999999999999999999999999999987 7789999999999999999


Q ss_pred             cCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 010735          280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE  359 (502)
Q Consensus       280 ~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~  359 (502)
                      +|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++++++++++
T Consensus       238 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~  317 (455)
T cd07120         238 DDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVE  317 (455)
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCC
Q 010735          360 HGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD  436 (502)
Q Consensus       360 ~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d  436 (502)
                      +++++|+++++||....   .+|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus       318 ~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d  397 (455)
T cd07120         318 RAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRD  397 (455)
T ss_pred             HHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCC
Confidence            99999999999875433   258999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       437 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      .+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++||+.|+++
T Consensus       398 ~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~  454 (455)
T cd07120         398 LARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY  454 (455)
T ss_pred             HHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchHHHHHHHhceeEEe
Confidence            999999999999999999998877788999999999999999999999999999985


No 50 
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=100.00  E-value=1.2e-95  Score=766.06  Aligned_cols=468  Identities=32%  Similarity=0.503  Sum_probs=437.1

Q ss_pred             ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (502)
Q Consensus        23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (502)
                      ++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++|++  .|+++|.++|.++|++++++|+++.++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~   79 (477)
T TIGR01722         2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFL--TWGQTSLAQRTSVLLRYQALLKEHRDE   79 (477)
T ss_pred             ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            579999999765678999999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (502)
Q Consensus       103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~  181 (502)
                      |+++++.|+|||+.++ ..|+..+++.+++++.......+...+.. .+...+.+++|+|||++|+|||||+...+++++
T Consensus        80 l~~~~~~e~Gk~~~~a-~~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~  158 (477)
T TIGR01722        80 IAELITAEHGKTHSDA-LGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFP  158 (477)
T ss_pred             HHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHH
Confidence            9999999999999975 57999999999999887766555433221 234467889999999999999999999999999


Q ss_pred             HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (502)
Q Consensus       182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~  261 (502)
                      +||++||+||+|||+.+|.++..+.++|.++|+|+|++|++++ +.+.++.|+.||+|+.|+||||+.+|+.|.+.++ .
T Consensus       159 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~-~  236 (477)
T TIGR01722       159 IAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGS-A  236 (477)
T ss_pred             HHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHH-h
Confidence            9999999999999999999999999999999999999999998 4567889999999999999999999999999877 7


Q ss_pred             CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCc
Q 010735          262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR  341 (502)
Q Consensus       262 ~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~  341 (502)
                      .+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|+++++++++|+|.+++++
T Consensus       237 ~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~  315 (477)
T TIGR01722       237 HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAE  315 (477)
T ss_pred             cCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCC
Confidence            889999999999999999999999999999999999999999999999999998 9999999999999999999999999


Q ss_pred             ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHH
Q 010735          342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEA  417 (502)
Q Consensus       342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea  417 (502)
                      +||++++.+++++.+++++++++|+++++||....    .+|+|+.|||+.+++++|+++++|+||||++|++|+|++||
T Consensus       316 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~ea  395 (477)
T TIGR01722       316 MGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEA  395 (477)
T ss_pred             cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHH
Confidence            99999999999999999999999999999997531    25899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCC--CcchHHHHHhhhhccEEEE
Q 010735          418 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFG--RDCGLESLHNYLQVKSVVT  494 (502)
Q Consensus       418 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g--~~~g~~~~~~~~~~k~v~~  494 (502)
                      |+++|+++|||+++|||+|.+.++++++++++|.|+||+.... .+.+||||+|.||+|  +++|.+|+++|++.|++++
T Consensus       396 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~  475 (477)
T TIGR01722       396 IALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTT  475 (477)
T ss_pred             HHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEE
Confidence            9999999999999999999999999999999999999986543 367899999999999  5889999999999999987


Q ss_pred             ec
Q 010735          495 PI  496 (502)
Q Consensus       495 ~~  496 (502)
                      ++
T Consensus       476 ~~  477 (477)
T TIGR01722       476 RW  477 (477)
T ss_pred             eC
Confidence            63


No 51 
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate.  P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=100.00  E-value=9.3e-96  Score=769.77  Aligned_cols=469  Identities=31%  Similarity=0.555  Sum_probs=437.8

Q ss_pred             cccceeEcCeEeeCCCCCeEEeecCC-CCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735           20 KFTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (502)
Q Consensus        20 ~~~~~~i~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (502)
                      ...++||||+|+.+  +.+++++||+ ||+++++++.++.+|++++++.|++||+  .|+.+|.++|.++|++++++|++
T Consensus        17 ~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~   92 (500)
T cd07083          17 RAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFK--TWKDWPQEDRARLLLKAADLLRR   92 (500)
T ss_pred             ccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence            34578999999973  5789999998 6999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeee--ecccccccceeecCCeEEEEEcCCChhHHhh
Q 010735           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL--KMSRALQGYTLREPIGVVGHIIPWNFPTTMF  176 (502)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~  176 (502)
                      +.++|++++++|+|||+.+ ...|+..+++.++++++++.+..+...  +...+...++.++|+|||++|+|||||+...
T Consensus        93 ~~~ela~~~~~e~Gk~~~~-a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~  171 (500)
T cd07083          93 RRRELIATLTYEVGKNWVE-AIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIF  171 (500)
T ss_pred             CHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHHH
Confidence            9999999999999999997 467999999999999998876554321  1223455678899999999999999999999


Q ss_pred             hhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735          177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ  256 (502)
Q Consensus       177 ~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~  256 (502)
                      ++++++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++++.+++..|+.|+++|.|.||||+.+|+.|.+
T Consensus       172 ~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~  251 (500)
T cd07083         172 TGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYE  251 (500)
T ss_pred             HHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999977788999999999999999999999999999


Q ss_pred             HHhcCCC------CceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcc
Q 010735          257 AAATSNL------KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW  330 (502)
Q Consensus       257 ~aa~~~~------~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~  330 (502)
                      .++ .+.      +|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++
T Consensus       252 ~aa-~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~  330 (500)
T cd07083         252 AAA-RLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERL  330 (500)
T ss_pred             HHh-hccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcC
Confidence            887 554      9999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEE
Q 010735          331 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK  410 (502)
Q Consensus       331 ~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~  410 (502)
                      ++|+|.++++++||++++.++++++++++++...| ++++||..+...|+|+.|||+.+++++|++++||+||||++|++
T Consensus       331 ~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~  409 (500)
T cd07083         331 SVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIR  409 (500)
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEE
Confidence            99999999999999999999999999999999887 99999976555689999999999999999999999999999999


Q ss_pred             eC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCC--CCCCcCCCCCCCCC-CcchHHHHHh
Q 010735          411 FK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD--SDCPYGGYKMSGFG-RDCGLESLHN  485 (502)
Q Consensus       411 ~~--~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~--~~~pfgG~~~SG~g-~~~g~~~~~~  485 (502)
                      |+  |++|||+++|+++|||+++|||+|.+.++++++++++|+|+||+.....  +.+||||+|.||+| +++|++++++
T Consensus       410 ~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~  489 (500)
T cd07083         410 YKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRR  489 (500)
T ss_pred             eCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHH
Confidence            99  9999999999999999999999999999999999999999999976533  57899999999999 6889999999


Q ss_pred             hhhccEEEEe
Q 010735          486 YLQVKSVVTP  495 (502)
Q Consensus       486 ~~~~k~v~~~  495 (502)
                      |++.|+++..
T Consensus       490 ~~~~k~~~~~  499 (500)
T cd07083         490 FLEMKAVAER  499 (500)
T ss_pred             hhheeEEEEc
Confidence            9999998754


No 52 
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=100.00  E-value=1.1e-95  Score=766.90  Aligned_cols=467  Identities=30%  Similarity=0.464  Sum_probs=434.2

Q ss_pred             cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735           20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH   99 (502)
Q Consensus        20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~   99 (502)
                      ...++||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+  .|+.++..+|.++|+++++.|+++
T Consensus        14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~   91 (496)
T PLN00412         14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQK--AWAKTPLWKRAELLHKAAAILKEH   91 (496)
T ss_pred             cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHh
Confidence            456789999999765678899999999999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcC--eeeec---c---cccccceeecCCeEEEEEcCCCh
Q 010735          100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG--EVLKM---S---RALQGYTLREPIGVVGHIIPWNF  171 (502)
Q Consensus       100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~--~~~~~---~---~~~~~~~~~~P~Gvv~~i~p~n~  171 (502)
                      +++|++++++|+|||..++ ..|+..+++.+++++..+.+..+  .....   +   .+...+++++|+|||++|+||||
T Consensus        92 ~~el~~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~  170 (496)
T PLN00412         92 KAPIAECLVKEIAKPAKDA-VTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNY  170 (496)
T ss_pred             HHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCc
Confidence            9999999999999999976 57999999999999876654422  11111   1   12234678999999999999999


Q ss_pred             hHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHH
Q 010735          172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG  251 (502)
Q Consensus       172 P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g  251 (502)
                      |+..+++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.++.|..||++|.|.|||| .+|
T Consensus       171 P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g  249 (496)
T PLN00412        171 PVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTG  249 (496)
T ss_pred             hHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHH
Confidence            9999999999999999999999999999999999999999999999999999877778999999999999999999 999


Q ss_pred             HHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccc
Q 010735          252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV  331 (502)
Q Consensus       252 ~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~  331 (502)
                      +.|++.++   .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus       250 ~~v~~~a~---~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~  326 (496)
T PLN00412        250 IAISKKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLT  326 (496)
T ss_pred             HHHHHHhC---CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCc
Confidence            99998864   789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEe
Q 010735          332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF  411 (502)
Q Consensus       332 ~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~  411 (502)
                      +|+|.+ ++++||++++.+++++.+++++++.+|+++++||..   .|+|+.|||+.++++++++++||+||||++|++|
T Consensus       327 ~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~  402 (496)
T PLN00412        327 VGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI  402 (496)
T ss_pred             cCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEe
Confidence            999987 789999999999999999999999999999998753   6899999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhcc
Q 010735          412 KTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVK  490 (502)
Q Consensus       412 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k  490 (502)
                      +|+||||+++|+++|||++||||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|++|+++|++.|
T Consensus       403 ~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k  482 (496)
T PLN00412        403 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVK  482 (496)
T ss_pred             CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChHHHHHHhcceE
Confidence            999999999999999999999999999999999999999999999864 4467999999999999999999999999999


Q ss_pred             EEEEecC
Q 010735          491 SVVTPIF  497 (502)
Q Consensus       491 ~v~~~~~  497 (502)
                      ++++++.
T Consensus       483 ~i~~~~~  489 (496)
T PLN00412        483 STVINLP  489 (496)
T ss_pred             EEEEecC
Confidence            9988764


No 53 
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=100.00  E-value=1.2e-95  Score=762.97  Aligned_cols=450  Identities=44%  Similarity=0.729  Sum_probs=426.0

Q ss_pred             eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (502)
Q Consensus        41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~  120 (502)
                      ++||+||+++++++.++.+|++++++.|++||+  .|+.++.++|.++|++++++|+++.++|++++++|+|||..++ .
T Consensus         1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~   77 (456)
T cd07107           1 VINPATGQVLARVPAASAADVDRAVAAARAAFP--EWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAM-L   77 (456)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-H
Confidence            579999999999999999999999999999999  8999999999999999999999999999999999999999975 6


Q ss_pred             ccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHH
Q 010735          121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL  200 (502)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~  200 (502)
                      .|+..+++.+++++.+.+.+.+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus        78 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~  157 (456)
T cd07107          78 GDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPL  157 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChH
Confidence            79999999999999877666555444433445678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEcc
Q 010735          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD  280 (502)
Q Consensus       201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~  280 (502)
                      ++..+++++.++ +|+|++|++++++.+.++.|+.||+++.|.||||+++|+.|++.++ .+++|+++|+|||||+||++
T Consensus       158 ~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa-~~~~~~~lElgG~~p~iV~~  235 (456)
T cd07107         158 SALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAA-EGIKHVTLELGGKNALIVFP  235 (456)
T ss_pred             HHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-cCCCeEEEECCCCCeEEECC
Confidence            999999999996 9999999999977678899999999999999999999999999987 78999999999999999999


Q ss_pred             CCCHHHHHHHHHHHH-hccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 010735          281 DVDVNTAADMALLGI-LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE  359 (502)
Q Consensus       281 dadl~~aa~~iv~~~-~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~  359 (502)
                      |||++.|++.+++++ |.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.++++++++++
T Consensus       236 dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~  315 (456)
T cd07107         236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYID  315 (456)
T ss_pred             CCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHH
Confidence            999999999999995 8999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecC
Q 010735          360 HGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK  435 (502)
Q Consensus       360 ~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~  435 (502)
                      ++.++|+++++||....    ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus       316 ~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~  395 (456)
T cd07107         316 SAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTN  395 (456)
T ss_pred             HHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECC
Confidence            99999999999996532    25899999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735          436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       436 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~  495 (502)
                      |.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+++++
T Consensus       396 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~  455 (456)
T cd07107         396 DISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR  455 (456)
T ss_pred             CHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence            999999999999999999999887778899999999999999999999999999999875


No 54 
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=100.00  E-value=1.5e-95  Score=763.83  Aligned_cols=460  Identities=26%  Similarity=0.336  Sum_probs=417.3

Q ss_pred             ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (502)
Q Consensus        23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (502)
                      ++||||+|+.+ ++.+++++||+||+++++++.++ +|+++|+++|++| |+  .|+.++..+|.++|++++++|+++++
T Consensus         2 ~~~I~g~~~~~-~~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~~Ra~~L~~~a~~l~~~~~   77 (513)
T cd07128           2 QSYVAGQWHAG-TGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGP--ALRALTFHERAAMLKALAKYLMERKE   77 (513)
T ss_pred             ceeECCEEEcC-CCCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhc--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence            57999999986 36789999999999999999876 8999999999997 78  89999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcC--------eeeeccc-c-cccceeecC-CeEEEEEcCCC
Q 010735          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG--------EVLKMSR-A-LQGYTLREP-IGVVGHIIPWN  170 (502)
Q Consensus       102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~--------~~~~~~~-~-~~~~~~~~P-~Gvv~~i~p~n  170 (502)
                      +|+++ ++|+|||+.++ ..|+..+++.+++++.++++..+        +..+... + ...+++++| +|||++|+|||
T Consensus        78 ~la~l-~~e~Gkp~~ea-~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN  155 (513)
T cd07128          78 DLYAL-SAATGATRRDS-WIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFN  155 (513)
T ss_pred             HHHHH-HHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcc
Confidence            99996 89999999875 47999999999999998766432        2222111 1 135678999 59999999999


Q ss_pred             hhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcC-CCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcH
Q 010735          171 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD  249 (502)
Q Consensus       171 ~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aG-lP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~  249 (502)
                      ||++.+++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+++|++.+++..+   +++|.|.||||++
T Consensus       156 ~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~  232 (513)
T cd07128         156 FPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAA  232 (513)
T ss_pred             cHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHH
Confidence            9999999999999999999999999999999999999999999 99999999998543333332   5789999999999


Q ss_pred             HHHHHHHHHh-cCCCCceEEecCCCCceEEccCCC-----HHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHH
Q 010735          250 VGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL  323 (502)
Q Consensus       250 ~g~~i~~~aa-~~~~~~~~~e~gG~~~~iV~~dad-----l~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l  323 (502)
                      +|+.|++.++ +.+++|+++|+|||||+||++|||     ++.+++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus       233 ~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l  312 (513)
T cd07128         233 TAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEAL  312 (513)
T ss_pred             HHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHH
Confidence            9999999852 367899999999999999999999     9999999999999999999999999999999999999999


Q ss_pred             HHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------CCCCceEecEEEeeCCC--CC
Q 010735          324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-------GKKGYYIEPTIFTNVTE--DM  394 (502)
Q Consensus       324 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-------~~~g~~~~Ptvl~~~~~--~~  394 (502)
                      +++++++++|+|.++++++|||+++.+++++.++|+++++. +++++||...       ...|+|++|||+.++++  +|
T Consensus       313 ~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~  391 (513)
T cd07128         313 KARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAAT  391 (513)
T ss_pred             HHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccc
Confidence            99999999999999999999999999999999999999988 9999999652       13589999999998887  48


Q ss_pred             cccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcc--eeEEEEcCcCC---------CCCC
Q 010735          395 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR--AGIIWINCYFA---------FDSD  463 (502)
Q Consensus       395 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~---------~~~~  463 (502)
                      ++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++++++  +|+|+||+...         ..+.
T Consensus       392 ~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~  471 (513)
T cd07128         392 AVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQ  471 (513)
T ss_pred             hHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCC
Confidence            999999999999999999999999999999999999999999999999999997  99999998642         2467


Q ss_pred             CCcCCCCCCCCCCcc-hHHHHHhhhhccEE
Q 010735          464 CPYGGYKMSGFGRDC-GLESLHNYLQVKSV  492 (502)
Q Consensus       464 ~pfgG~~~SG~g~~~-g~~~~~~~~~~k~v  492 (502)
                      +||||+|.||+|+++ |.+|+++|++.|+|
T Consensus       472 ~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v  501 (513)
T cd07128         472 LVHGGPGRAGGGEELGGLRGVKHYMQRTAV  501 (513)
T ss_pred             CCCCCcccCCCCcccccHHHHHHhheeeee
Confidence            899999999999994 79999999999986


No 55 
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of  Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=100.00  E-value=2.5e-95  Score=760.62  Aligned_cols=457  Identities=51%  Similarity=0.864  Sum_probs=429.9

Q ss_pred             CeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Q 010735           37 KTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS  116 (502)
Q Consensus        37 ~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~  116 (502)
                      .+++++||+||+++++++.++.+|++++++.|++||+.+.|+.+|.++|.++|++++++|+++.++|++++++|+|||..
T Consensus         2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~   81 (462)
T cd07112           2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS   81 (462)
T ss_pred             CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence            46889999999999999999999999999999999972139999999999999999999999999999999999999999


Q ss_pred             HHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCC
Q 010735          117 WAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE  196 (502)
Q Consensus       117 ~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~  196 (502)
                      ++...|+..+++.+++++.+++...+...+...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+
T Consensus        82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~  161 (462)
T cd07112          82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAE  161 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCC
Confidence            76556999999999999998876655433332334567899999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCce
Q 010735          197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL  276 (502)
Q Consensus       197 ~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~  276 (502)
                      .+|.++..+++++.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+++|+.|++.++..++||+++|+||+||+
T Consensus       162 ~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~  241 (462)
T cd07112         162 QSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPN  241 (462)
T ss_pred             CCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeE
Confidence            99999999999999999999999999997777899999999999999999999999999987744789999999999999


Q ss_pred             EEccCC-CHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHH
Q 010735          277 LIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIL  355 (502)
Q Consensus       277 iV~~da-dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~  355 (502)
                      ||++|+ |++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.
T Consensus       242 iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~  321 (462)
T cd07112         242 IVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVL  321 (462)
T ss_pred             EECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHH
Confidence            999999 9999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735          356 SYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM  433 (502)
Q Consensus       356 ~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~  433 (502)
                      ++|++++++|+++++||....  ..|+|+.|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++||
T Consensus       322 ~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~  401 (462)
T cd07112         322 GYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVW  401 (462)
T ss_pred             HHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEE
Confidence            999999999999999997642  258899999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       434 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      |+|.+.+.++++++++|.|+||+++...+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus       402 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~  461 (462)
T cd07112         402 TSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW  461 (462)
T ss_pred             cCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence            999999999999999999999998777788999999999999999999999999999985


No 56 
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=100.00  E-value=4.3e-95  Score=762.49  Aligned_cols=466  Identities=31%  Similarity=0.463  Sum_probs=429.7

Q ss_pred             eeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 010735           24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL  103 (502)
Q Consensus        24 ~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  103 (502)
                      +||||+|+.+ ++++++++||+||+++++++.++.+|+++++++|++|++  .|+.++.++|.++|++++++|++++++|
T Consensus         1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el   77 (484)
T TIGR03240         1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFP--AWARLSLEERIAVVQRFAALLEERKEAL   77 (484)
T ss_pred             CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            4899999875 467899999999999999999999999999999999999  8999999999999999999999999999


Q ss_pred             HHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHH
Q 010735          104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA  183 (502)
Q Consensus       104 ~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A  183 (502)
                      ++++++|+|||..++ ..|+..+++.+++++.......+.......+...++.++|+|||++|+|||||+..+++++++|
T Consensus        78 a~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~A  156 (484)
T TIGR03240        78 ARVIARETGKPLWET-RTEVASMIGKVAISIKAYHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA  156 (484)
T ss_pred             HHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHH
Confidence            999999999999976 4799999999998877665544433211123346788999999999999999999999999999


Q ss_pred             HHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCC
Q 010735          184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL  263 (502)
Q Consensus       184 LaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~  263 (502)
                      |++||+||+|||+.+|+++..+++++.++|+|+|++|++++ +.+.++.|+.||++|.|.||||+++|+.|++.++....
T Consensus       157 LaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~  235 (484)
T TIGR03240       157 LLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPE  235 (484)
T ss_pred             HHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCC
Confidence            99999999999999999999999999999999999999998 56789999999999999999999999999998763456


Q ss_pred             CceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccH-HHHHHHHHHHHhccccCCC-CCCCCc
Q 010735          264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGDP-FDPAVR  341 (502)
Q Consensus       264 ~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~-~~~~~~  341 (502)
                      +++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|.+.++++++|+| .+++++
T Consensus       236 ~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~  315 (484)
T TIGR03240       236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPF  315 (484)
T ss_pred             CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence            88999999999999999999999999999999999999999999999999984 9999999999999999997 577889


Q ss_pred             ccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHH
Q 010735          342 QGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSA  421 (502)
Q Consensus       342 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~  421 (502)
                      +||++++.+++++.+++++++++|+++++||...+..+.|++|||+ +++++|+++++|+||||++|++|+|++|||+++
T Consensus       316 ~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~  394 (484)
T TIGR03240       316 MGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIA  394 (484)
T ss_pred             ccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHH
Confidence            9999999999999999999999999999988654446899999999 689999999999999999999999999999999


Q ss_pred             hcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735          422 NNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI  496 (502)
Q Consensus       422 n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~  496 (502)
                      |+++|||+++|||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|.++++ |++.|+++++.
T Consensus       395 n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~  469 (484)
T TIGR03240       395 NNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEA  469 (484)
T ss_pred             hCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEec
Confidence            99999999999999999999999999999999998755 4467899999999999999976766 99999999885


No 57 
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=100.00  E-value=2.1e-95  Score=761.07  Aligned_cols=451  Identities=53%  Similarity=0.895  Sum_probs=429.5

Q ss_pred             ecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhc
Q 010735           42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG  121 (502)
Q Consensus        42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~  121 (502)
                      +||+||+++++++.++.++++++++.|++||+  .|+.+|.++|.++|++++++|++++++|++++++|+|||..++...
T Consensus         2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~   79 (453)
T cd07115           2 LNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRL   79 (453)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence            69999999999999999999999999999999  8999999999999999999999999999999999999999987656


Q ss_pred             cHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHH
Q 010735          122 DIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI  201 (502)
Q Consensus       122 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~  201 (502)
                      |+..+++.+++++.++++..+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus        80 ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~  159 (453)
T cd07115          80 DVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLS  159 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence            99999999999999887765544443344567899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccC
Q 010735          202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD  281 (502)
Q Consensus       202 ~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~d  281 (502)
                      +..+.+++.++|+|+++++++++++.++++.|+.||++|.|+||||+.+|+.|++.++ .+++|+++|+|||||+||++|
T Consensus       160 ~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa-~~~~~~~lElgG~~p~iV~~d  238 (453)
T cd07115         160 ALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAA-GNLKRVSLELGGKSANIVFAD  238 (453)
T ss_pred             HHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCeEEEecCCCCceEECCC
Confidence            9999999999999999999999977778899999999999999999999999999887 688999999999999999999


Q ss_pred             CCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 010735          282 VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHG  361 (502)
Q Consensus       282 adl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a  361 (502)
                      ||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++
T Consensus       239 Adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a  318 (453)
T cd07115         239 ADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVG  318 (453)
T ss_pred             CCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 010735          362 KREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN  441 (502)
Q Consensus       362 ~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~  441 (502)
                      +++|+++++||..+...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++
T Consensus       319 ~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~  398 (453)
T cd07115         319 REEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAH  398 (453)
T ss_pred             HHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHH
Confidence            99999999999765446899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735          442 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       442 ~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~  495 (502)
                      ++++++++|.|+||+++...+.+||||+|.||+|+++|.+|+++|++.|+++++
T Consensus       399 ~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~  452 (453)
T cd07115         399 RVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN  452 (453)
T ss_pred             HHHHhcCccEEEECCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence            999999999999999877788899999999999999999999999999999764


No 58 
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=100.00  E-value=2.4e-95  Score=761.17  Aligned_cols=449  Identities=37%  Similarity=0.633  Sum_probs=424.0

Q ss_pred             EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Q 010735           39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA  118 (502)
Q Consensus        39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~  118 (502)
                      ++++||+||+++++++.++.+|++++++.|++||+  .|+.+|.++|.++|++++++|+++.++|++++++|+|||..++
T Consensus         1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   78 (456)
T cd07145           1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKD--VMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQS   78 (456)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence            36789999999999999999999999999999999  8999999999999999999999999999999999999999976


Q ss_pred             hhccHHHHHHHHHHHHHhhhhhcCeeeeccc-----ccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEe
Q 010735          119 KMGDIPGAANTLRYYAGAADKIHGEVLKMSR-----ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK  193 (502)
Q Consensus       119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~k  193 (502)
                      . .|+..+++.+++++++++.+.+...+...     +...+.+++|+|||++|+|||||+...++++++||++||+||+|
T Consensus        79 ~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~K  157 (456)
T cd07145          79 R-VEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVK  157 (456)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEE
Confidence            4 69999999999999877655544332211     23456889999999999999999999999999999999999999


Q ss_pred             cCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCC
Q 010735          194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK  273 (502)
Q Consensus       194 ps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~  273 (502)
                      ||+.+|.++..+++++.++|+|+|+++++++++.++++.|+.||+++.|.||||+++|+.|++.++ ++++|+++|+|||
T Consensus       158 ps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa-~~~~~v~lElgG~  236 (456)
T cd07145         158 PSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAG-GTGKKVALELGGS  236 (456)
T ss_pred             CCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCceEEecCCC
Confidence            999999999999999999999999999999977788999999999999999999999999999987 7899999999999


Q ss_pred             CceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHH
Q 010735          274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR  353 (502)
Q Consensus       274 ~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~  353 (502)
                      ||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++.+++|+|.++++++||++++.++++
T Consensus       237 n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~  316 (456)
T cd07145         237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVER  316 (456)
T ss_pred             CeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735          354 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM  433 (502)
Q Consensus       354 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~  433 (502)
                      +++++++++.+|+++++||..+  .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++|||
T Consensus       317 ~~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~  394 (456)
T cd07145         317 MENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVF  394 (456)
T ss_pred             HHHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEE
Confidence            9999999999999999999764  38999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhhcceeEEEEcCcCCCC-CCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          434 TKDLNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       434 t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      |+|.+.++++++++++|+|+||+..... +.+||||+|.||+|+++|++|+++|++.|+|+
T Consensus       395 t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~  455 (456)
T cd07145         395 TNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIV  455 (456)
T ss_pred             CCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEEe
Confidence            9999999999999999999999876543 67999999999999999999999999999985


No 59 
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=100.00  E-value=3.8e-95  Score=758.66  Aligned_cols=450  Identities=40%  Similarity=0.659  Sum_probs=426.4

Q ss_pred             eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHh
Q 010735           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP-RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK  119 (502)
Q Consensus        41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~  119 (502)
                      ++||+||+++++++.++.+|++++++.|++|++  .|+ .+|..+|.++|++++++|+++.++|++++++|+|||..++.
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~   78 (459)
T cd07089           1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFD--TGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTAR   78 (459)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence            479999999999999999999999999999999  899 99999999999999999999999999999999999998666


Q ss_pred             hccHHHHHHHHHHHHHhhhhhcCee-eecc----cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEec
Q 010735          120 MGDIPGAANTLRYYAGAADKIHGEV-LKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP  194 (502)
Q Consensus       120 ~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kp  194 (502)
                      ..|+..+++.+++++..+++..+.. .+..    .+...+++++|+|||++|+|||||+...++++++||++||+||+||
T Consensus        79 ~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKp  158 (459)
T cd07089          79 AMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKP  158 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence            6799999999999998877654433 2211    2445689999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCC
Q 010735          195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS  274 (502)
Q Consensus       195 s~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~  274 (502)
                      |+.+|.++..+.++|.++|+|+|+++++++++++++..|+.||+++.|.||||+.+|+.|++.++ .++||+++|+||||
T Consensus       159 s~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~n  237 (459)
T cd07089         159 APDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAA-ATLKRVLLELGGKS  237 (459)
T ss_pred             CCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCcEEEECCCCC
Confidence            99999999999999999999999999999977778999999999999999999999999999987 78899999999999


Q ss_pred             ceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHH
Q 010735          275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI  354 (502)
Q Consensus       275 ~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~  354 (502)
                      |+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus       238 ~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v  317 (459)
T cd07089         238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRV  317 (459)
T ss_pred             eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEE
Q 010735          355 LSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGI  432 (502)
Q Consensus       355 ~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v  432 (502)
                      ++++++++++|+++++||....  ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus       318 ~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v  397 (459)
T cd07089         318 EGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGV  397 (459)
T ss_pred             HHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEE
Confidence            9999999999999999997643  26899999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          433 MTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       433 ~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      ||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus       398 ~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~  458 (459)
T cd07089         398 WSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA  458 (459)
T ss_pred             EcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence            9999999999999999999999998877788999999999999999999999999999986


No 60 
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=100.00  E-value=3.8e-95  Score=759.72  Aligned_cols=449  Identities=47%  Similarity=0.799  Sum_probs=424.9

Q ss_pred             eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (502)
Q Consensus        41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~  120 (502)
                      ++||+||+++++++.++.+|++++++.|++||+  .|+.+|.++|.++|++++++|+++.++|++++++|+|||..++ .
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~   77 (456)
T cd07110           1 VINPATEATIGEIPAATAEDVDAAVRAARRAFP--RWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEA-A   77 (456)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-H
Confidence            479999999999999999999999999999999  8999999999999999999999999999999999999999975 4


Q ss_pred             ccHHHHHHHHHHHHHhhhhhcC---eeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCC
Q 010735          121 GDIPGAANTLRYYAGAADKIHG---EVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE  196 (502)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~  196 (502)
                      .|+..+++.+++++..++++..   ...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus        78 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~  157 (456)
T cd07110          78 WDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSE  157 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcc
Confidence            6999999999999988776532   222221 244578899999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCce
Q 010735          197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL  276 (502)
Q Consensus       197 ~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~  276 (502)
                      .+|+++..+++++.++|+|+|+++++++++.+.++.|+.||++|.|.||||+.+|+.|++.++ .+++|+++|+|||||+
T Consensus       158 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa-~~~~~~~lElgG~~~~  236 (456)
T cd07110         158 LTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAA-QDIKPVSLELGGKSPI  236 (456)
T ss_pred             cchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCeEEEEcCCCCee
Confidence            999999999999999999999999999977778999999999999999999999999999987 7889999999999999


Q ss_pred             EEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHH
Q 010735          277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILS  356 (502)
Q Consensus       277 iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~  356 (502)
                      ||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++
T Consensus       237 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~  316 (456)
T cd07110         237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLS  316 (456)
T ss_pred             EECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEec
Q 010735          357 YIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMT  434 (502)
Q Consensus       357 ~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t  434 (502)
                      ++++++.+|+++++||....  ..|+|+.|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||
T Consensus       317 ~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t  396 (456)
T cd07110         317 FIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVIS  396 (456)
T ss_pred             HHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEC
Confidence            99999999999999997643  3689999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          435 KDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       435 ~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      +|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus       397 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~  455 (456)
T cd07110         397 RDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT  455 (456)
T ss_pred             CCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence            99999999999999999999998767788999999999999999999999999999985


No 61 
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis  and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=100.00  E-value=4.3e-95  Score=759.50  Aligned_cols=451  Identities=45%  Similarity=0.771  Sum_probs=427.7

Q ss_pred             eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (502)
Q Consensus        41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~  120 (502)
                      ++||+||+++++++.++.+|++++++.|++|++  .|+.++.++|.++|+++++.|.++.++|++++++|+|||..++ .
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~   77 (457)
T cd07090           1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQK--EWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEA-R   77 (457)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-H
Confidence            579999999999999999999999999999999  8999999999999999999999999999999999999999865 5


Q ss_pred             ccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHH
Q 010735          121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL  200 (502)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~  200 (502)
                      .|+..+++.+++++.+.+.+.+...+...+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.
T Consensus        78 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~  157 (457)
T cd07090          78 VDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPL  157 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeeccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcH
Confidence            79999999999999888776555444334556788999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEcc
Q 010735          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD  280 (502)
Q Consensus       201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~  280 (502)
                      ++..+.+++.++|+|+|+++++++++ ++++.|+.|+++|+|.||||+.+|+.|++.++ ..++|+++|+|||||+||++
T Consensus       158 ~~~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~  235 (457)
T cd07090         158 TALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAA-KGIKHVTLELGGKSPLIIFD  235 (457)
T ss_pred             HHHHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-ccCCceEEecCCCCceEECC
Confidence            99999999999999999999999854 58899999999999999999999999999987 78999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 010735          281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH  360 (502)
Q Consensus       281 dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~  360 (502)
                      |||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++.+++|+|.++++++||+++..+++++.+++++
T Consensus       236 dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~  315 (457)
T cd07090         236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIES  315 (457)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCEEEeCCcccC-----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecC
Q 010735          361 GKREGATLLTGGKPIG-----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK  435 (502)
Q Consensus       361 a~~~Ga~v~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~  435 (502)
                      ++.+|+++++||....     ..|+|++|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||+++|||+
T Consensus       316 a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~  395 (457)
T cd07090         316 AKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTR  395 (457)
T ss_pred             HHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcC
Confidence            9999999999997532     25899999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735          436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI  496 (502)
Q Consensus       436 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~  496 (502)
                      |.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+++++.
T Consensus       396 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~~  456 (457)
T cd07090         396 DLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVEM  456 (457)
T ss_pred             CHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEeC
Confidence            9999999999999999999998777788999999999999999999999999999998764


No 62 
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans,  D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent,  L-sorbosone dehydrogenase.
Probab=100.00  E-value=5.8e-95  Score=756.24  Aligned_cols=450  Identities=49%  Similarity=0.839  Sum_probs=425.0

Q ss_pred             ecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhc
Q 010735           42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG  121 (502)
Q Consensus        42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~  121 (502)
                      +||+||+++++++.++.+|++++++.|++||+++.|+++|.++|.++|++++++|++++++|++++++|+|||..++ ..
T Consensus         2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~   80 (454)
T cd07118           2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQA-RG   80 (454)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HH
Confidence            59999999999999999999999999999998213999999999999999999999999999999999999999976 57


Q ss_pred             cHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHH
Q 010735          122 DIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL  200 (502)
Q Consensus       122 ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~  200 (502)
                      |+..+++.+++++.+.+.+.+...+. ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.
T Consensus        81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~  160 (454)
T cd07118          81 EIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSG  160 (454)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcH
Confidence            99999999999998776655443321 22345678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEcc
Q 010735          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD  280 (502)
Q Consensus       201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~  280 (502)
                      ++..+.++|.++|+|+|+++++++++.++++.|+.|+++|.|.||||+++|+.|.+.++ .+++|+++|+|||||+||++
T Consensus       161 ~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~n~~iV~~  239 (454)
T cd07118         161 TTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAA-RNLKKVSLELGGKNPQIVFA  239 (454)
T ss_pred             HHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCcEEeccCCCCceEECC
Confidence            99999999999999999999999977678999999999999999999999999999987 78899999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 010735          281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH  360 (502)
Q Consensus       281 dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~  360 (502)
                      |||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++
T Consensus       240 dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~  319 (454)
T cd07118         240 DADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDA  319 (454)
T ss_pred             CCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 010735          361 GKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV  439 (502)
Q Consensus       361 a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  439 (502)
                      ++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.
T Consensus       320 a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~  399 (454)
T cd07118         320 GRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDT  399 (454)
T ss_pred             HHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHH
Confidence            9999999999998654 368999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          440 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       440 ~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      ++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus       400 ~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~  453 (454)
T cd07118         400 ALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH  453 (454)
T ss_pred             HHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence            999999999999999998877788999999999999999999999999999875


No 63 
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=100.00  E-value=8.8e-95  Score=750.06  Aligned_cols=431  Identities=24%  Similarity=0.365  Sum_probs=400.2

Q ss_pred             CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHH
Q 010735           56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG  135 (502)
Q Consensus        56 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~  135 (502)
                      ....|+++++++|++||+  .|+.++..+|.++|++++++|++|.++|++++++|+|||..++...|+..+++.++++++
T Consensus         7 ~~~~~v~~av~~a~~af~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~   84 (484)
T PLN02174          7 FGAADASILVTELRRSFD--DGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALK   84 (484)
T ss_pred             cCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            467899999999999999  899999999999999999999999999999999999999987765699999999999998


Q ss_pred             hhhhhcCe----eeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHH
Q 010735          136 AADKIHGE----VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL  211 (502)
Q Consensus       136 ~~~~~~~~----~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~  211 (502)
                      .+++..+.    ......+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~  164 (484)
T PLN02174         85 QLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ  164 (484)
T ss_pred             HHHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH
Confidence            77654441    11111233468999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHH
Q 010735          212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA  291 (502)
Q Consensus       212 aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~i  291 (502)
                       ++|+|++++++|.+ +.+..|+. +++|.|+||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+
T Consensus       165 -~lp~gvv~vv~G~~-~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa-~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i  240 (484)
T PLN02174        165 -YLDSSAVRVVEGAV-TETTALLE-QKWDKIFYTGSSKIGRVIMAAAA-KHLTPVVLELGGKSPVVVDSDTDLKVTVRRI  240 (484)
T ss_pred             -hCCCCEEEEEECCh-HHHHHHhc-ccCCEEEEECChHHHHHHHHHHH-hcCCcEEEecCCCCeEEEcCCCCHHHHHHHH
Confidence             69999999999844 45677776 89999999999999999999987 8899999999999999999999999999999


Q ss_pred             HHHHh-ccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEe
Q 010735          292 LLGIL-FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT  370 (502)
Q Consensus       292 v~~~~-~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~  370 (502)
                      ++++| .|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ .+|+++++
T Consensus       241 ~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~  318 (484)
T PLN02174        241 IAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVY  318 (484)
T ss_pred             HHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEE
Confidence            99999 69999999999999999999999999999999999999987 78999999999999999999997 78999999


Q ss_pred             CCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhccee
Q 010735          371 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG  450 (502)
Q Consensus       371 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g  450 (502)
                      ||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus       319 GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG  397 (484)
T PLN02174        319 GGEKD-RENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAG  397 (484)
T ss_pred             CCCcC-CCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcc
Confidence            99764 36899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCcCCCC--CCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735          451 IIWINCYFAFD--SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       451 ~v~iN~~~~~~--~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~  495 (502)
                      .|+||++....  +.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus       398 ~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~  444 (484)
T PLN02174        398 GIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR  444 (484)
T ss_pred             eEEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEEC
Confidence            99999976543  6789999999999999999999999999999876


No 64 
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00  E-value=1.2e-94  Score=754.08  Aligned_cols=446  Identities=32%  Similarity=0.502  Sum_probs=418.8

Q ss_pred             EeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Q 010735           40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA  118 (502)
Q Consensus        40 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~  118 (502)
                      +++||+||+++++++.++.+|++++++.|++||+  . |+.+|.++|.++|++++++|+++.++|++++++|+|||..++
T Consensus         2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   79 (455)
T cd07148           2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFL--DRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDA   79 (455)
T ss_pred             CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh--hcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence            5789999999999999999999999999999999  6 567999999999999999999999999999999999999975


Q ss_pred             hhccHHHHHHHHHHHHHhhhhhcCeeeecc-----cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEe
Q 010735          119 KMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK  193 (502)
Q Consensus       119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~k  193 (502)
                       ..|+..+++.+++++..+++..+...+..     .+...++.++|+|||++|+|||||+...++++++||++||+||+|
T Consensus        80 -~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlK  158 (455)
T cd07148          80 -KVEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVK  158 (455)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEee
Confidence             56999999999999988776654432211     233567899999999999999999999999999999999999999


Q ss_pred             cCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCC
Q 010735          194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK  273 (502)
Q Consensus       194 ps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~  273 (502)
                      ||+.+|+++..+++++.++|+|+|++++++++ .+.++.|+.||++|.|.||||+++|+.|++.++ . .+|+++|+|||
T Consensus       159 ps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa-~-~~~~~lElGG~  235 (455)
T cd07148         159 PALATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLA-P-GTRCALEHGGA  235 (455)
T ss_pred             CCCcccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhh-c-CCcEEEecCCC
Confidence            99999999999999999999999999999984 467899999999999999999999999999876 4 59999999999


Q ss_pred             CceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHH
Q 010735          274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR  353 (502)
Q Consensus       274 ~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~  353 (502)
                      ||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus       236 ~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~  315 (455)
T cd07148         236 APVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDR  315 (455)
T ss_pred             CceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735          354 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM  433 (502)
Q Consensus       354 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~  433 (502)
                      +++++++++.+|+++++||...  .++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus       316 ~~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~  393 (455)
T cd07148         316 VEEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVF  393 (455)
T ss_pred             HHHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEE
Confidence            9999999999999999999764  47899999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhhcceeEEEEcCcCCCC-CCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          434 TKDLNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       434 t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      |+|.+.++++++++++|.|+||++.... +.+||||+|.||+|+++|.+|+++|++.|+++
T Consensus       394 t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~  454 (455)
T cd07148         394 TKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAV  454 (455)
T ss_pred             cCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEe
Confidence            9999999999999999999999976544 56899999999999999999999999999985


No 65 
>PF00171 Aldedh:  Aldehyde dehydrogenase family;  InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation.  The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=100.00  E-value=7.3e-96  Score=766.35  Aligned_cols=458  Identities=47%  Similarity=0.775  Sum_probs=431.8

Q ss_pred             EeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 010735           30 FVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL  109 (502)
Q Consensus        30 ~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~  109 (502)
                      |+.+++ ++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|++++++|+++.++|++++++
T Consensus         1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~   77 (462)
T PF00171_consen    1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFK--EWSKLPAAERARILERFADLLEERRDELAELIAL   77 (462)
T ss_dssp             EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHH--HHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHH--hhhhhhhhhHHHHHHHHHHHHhhccccccccccc
Confidence            677644 7799999999999999999999999999999999999  8999999999999999999999999999999999


Q ss_pred             HhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCe
Q 010735          110 DAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT  189 (502)
Q Consensus       110 e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~  189 (502)
                      |+|||..++.. |+..+++.+++++++++.+.+...+...+...++.++|+|||++|+|||||++.+++++++||++||+
T Consensus        78 e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~  156 (462)
T PF00171_consen   78 ETGKPIAEARG-EVDRAIDFLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNT  156 (462)
T ss_dssp             HHTSSHHHHHH-HHHHHHHHHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-E
T ss_pred             ccccccccccc-hhhhhhhhhhhhhhcccceehhhcccccccccccccccccceeecccccccccccccchhhhhccccc
Confidence            99999998755 99999999999999998877766665567788999999999999999999999999999999999999


Q ss_pred             EEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEe
Q 010735          190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE  269 (502)
Q Consensus       190 vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e  269 (502)
                      ||+|||+.+|.++..+++++.++|+|+|+++++++++.+++..|+.||+++.|.||||+++++.|.+.++ +.++|+++|
T Consensus       157 VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~-~~~~~v~le  235 (462)
T PF00171_consen  157 VVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAA-KNLKPVVLE  235 (462)
T ss_dssp             EEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHH-TTTSEEEEE
T ss_pred             ceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcc-ccccccccc
Confidence            9999999999999999999999999999999999988899999999999999999999999999999987 889999999


Q ss_pred             cCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHH
Q 010735          270 LGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKK  349 (502)
Q Consensus       270 ~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~  349 (502)
                      +|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..
T Consensus       236 lgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~  315 (462)
T PF00171_consen  236 LGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKA  315 (462)
T ss_dssp             ECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHH
T ss_pred             ccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHcCCEEEeCC---cccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCC
Q 010735          350 QFDRILSYIEHGKREGATLLTGG---KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRY  426 (502)
Q Consensus       350 ~~~~~~~~i~~a~~~Ga~v~~gg---~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~  426 (502)
                      +++++.+++++++.+|+++++||   ......|+|++|||+.+++++|+++++|+||||++|++|+|++||++++|+++|
T Consensus       316 ~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~  395 (462)
T PF00171_consen  316 QRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEY  395 (462)
T ss_dssp             HHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSE
T ss_pred             hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCC
Confidence            99999999999999999999999   333458999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCC-CCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735          427 GLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSV  492 (502)
Q Consensus       427 gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~-~pfgG~~~SG~g~~~g~~~~~~~~~~k~v  492 (502)
                      ||+++|||+|.+.++++++++++|+|+||+++...+. +||||+|.||+|+++|.+|+++|++.|+|
T Consensus       396 gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V  462 (462)
T PF00171_consen  396 GLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKTV  462 (462)
T ss_dssp             ESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred             CceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence            9999999999999999999999999999999875544 69999999999999999999999999986


No 66 
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=100.00  E-value=1.6e-94  Score=754.71  Aligned_cols=448  Identities=47%  Similarity=0.766  Sum_probs=423.3

Q ss_pred             eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHh
Q 010735           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP-RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK  119 (502)
Q Consensus        41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~  119 (502)
                      ++||+||+++++++.++.+|++++++.|++|++  .|. .+|.++|.++|++++++|.+++++|++++++|+|||..++ 
T Consensus         1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-   77 (454)
T cd07109           1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFE--SGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQA-   77 (454)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-
Confidence            479999999999999999999999999999999  776 9999999999999999999999999999999999999975 


Q ss_pred             hccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcH
Q 010735          120 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP  199 (502)
Q Consensus       120 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~  199 (502)
                      ..|+..+++.+++++++.++..+...+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|
T Consensus        78 ~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p  157 (454)
T cd07109          78 RADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAP  157 (454)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence            56999999999999988776655444433445678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEc
Q 010735          200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF  279 (502)
Q Consensus       200 ~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~  279 (502)
                      +++..+++++.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||+
T Consensus       158 ~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa-~~~~p~~lElgG~~~~iV~  236 (454)
T cd07109         158 LTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA-ENVVPVTLELGGKSPQIVF  236 (454)
T ss_pred             HHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCcEEEECCCCCceEEC
Confidence            999999999999999999999999877778999999999999999999999999999987 7899999999999999999


Q ss_pred             cCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 010735          280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE  359 (502)
Q Consensus       280 ~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~  359 (502)
                      +|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++++
T Consensus       237 ~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~  315 (454)
T cd07109         237 ADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVA  315 (454)
T ss_pred             CCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999985 689999999999999999999


Q ss_pred             HHHHcCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCC
Q 010735          360 HGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD  436 (502)
Q Consensus       360 ~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d  436 (502)
                      +++.+|+++++||....   ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus       316 ~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d  395 (454)
T cd07109         316 RARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRD  395 (454)
T ss_pred             HHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCC
Confidence            99999999999987543   368999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcceeEEEEcCcC-CCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          437 LNVANTVSRSIRAGIIWINCYF-AFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       437 ~~~~~~~~~~l~~g~v~iN~~~-~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      .+.++++++++++|.|+||++. ...+.+||||+|.||+|+++|++|+++|++.|+|+
T Consensus       396 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~  453 (454)
T cd07109         396 GDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA  453 (454)
T ss_pred             HHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence            9999999999999999999987 45678899999999999999999999999999985


No 67 
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00  E-value=1.4e-94  Score=763.50  Aligned_cols=465  Identities=36%  Similarity=0.572  Sum_probs=431.9

Q ss_pred             eeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 010735           24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL  103 (502)
Q Consensus        24 ~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  103 (502)
                      ++|.|.|-.  ++.+++++||+||+++++++.++.+|++++++.|++|++  .|+.+|.++|.++|++++++|.++.++|
T Consensus        21 ~~~~~~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~el   96 (524)
T PRK09407         21 RLTARVDGA--AGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQR--AWAATPVRERAAVLLRFHDLVLENREEL   96 (524)
T ss_pred             HHHhhcCCC--CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            456665544  678999999999999999999999999999999999999  8999999999999999999999999999


Q ss_pred             HHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeee-c--ccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735          104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-M--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV  180 (502)
Q Consensus       104 ~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i  180 (502)
                      ++++++|+|||..++ ..|+..+++.+++++..+++..+.... .  ......+..++|+|||++|+|||||++..++++
T Consensus        97 a~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~  175 (524)
T PRK09407         97 LDLVQLETGKARRHA-FEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDA  175 (524)
T ss_pred             HHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHH
Confidence            999999999999975 569999999999999877655432211 1  112456889999999999999999999999999


Q ss_pred             HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735          181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT  260 (502)
Q Consensus       181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~  260 (502)
                      ++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++++.+.++.|+.|  +|.|.||||+++|+.|++.++ 
T Consensus       176 ~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa-  252 (524)
T PRK09407        176 IPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG-  252 (524)
T ss_pred             HHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHH-
Confidence            99999999999999999999999999999999999999999999777788999876  789999999999999999887 


Q ss_pred             CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735          261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV  340 (502)
Q Consensus       261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~  340 (502)
                      .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++
T Consensus       253 ~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~  332 (524)
T PRK09407        253 RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSA  332 (524)
T ss_pred             hcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCC
Confidence            78899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735          341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK  419 (502)
Q Consensus       341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~  419 (502)
                      ++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus       333 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~  412 (524)
T PRK09407        333 DMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVE  412 (524)
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHH
Confidence            999999999999999999999999999999997532 2579999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC---CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735          420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA---FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI  496 (502)
Q Consensus       420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~---~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~  496 (502)
                      ++|+++|||++||||+|.++++++++++++|.|+||+...   ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus       413 ~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~  492 (524)
T PRK09407        413 RANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQR  492 (524)
T ss_pred             HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEcc
Confidence            9999999999999999999999999999999999999654   3467899999999999999999999999999998764


No 68 
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=100.00  E-value=2.1e-94  Score=752.06  Aligned_cols=445  Identities=42%  Similarity=0.697  Sum_probs=420.6

Q ss_pred             eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (502)
Q Consensus        41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~  120 (502)
                      ++||+||+++++++.++.+|++++++.|++||+  .|+.++.++|.++|++++++|++++++|++++++|+|||..++ .
T Consensus         1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~   77 (446)
T cd07106           1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFP--GWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEA-Q   77 (446)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-H
Confidence            479999999999999999999999999999999  8999999999999999999999999999999999999999975 4


Q ss_pred             ccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHH
Q 010735          121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL  200 (502)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~  200 (502)
                      .|+..+++.+++++....  .+.......+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.
T Consensus        78 ~ev~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~  155 (446)
T cd07106          78 FEVGGAVAWLRYTASLDL--PDEVIEDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPL  155 (446)
T ss_pred             HHHHHHHHHHHHHHhhhh--cCccccCCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence            699999999999887653  222222223456789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEcc
Q 010735          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD  280 (502)
Q Consensus       201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~  280 (502)
                      ++..+++++.++ +|+|+++++++ +.+.+..|+.|+++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++
T Consensus       156 ~~~~l~~~~~~~-lP~g~~~~v~g-~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa-~~~~~~~lElGG~~p~iV~~  232 (446)
T cd07106         156 CTLKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAA-KTLKRVTLELGGNDAAIVLP  232 (446)
T ss_pred             HHHHHHHHHHHh-CCcCeEEEeeC-ChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeeEEecCCCCeeEECC
Confidence            999999999996 99999999998 4468899999999999999999999999999987 78999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 010735          281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH  360 (502)
Q Consensus       281 dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~  360 (502)
                      |||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++
T Consensus       233 dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~  312 (446)
T cd07106         233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVED  312 (446)
T ss_pred             CCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 010735          361 GKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA  440 (502)
Q Consensus       361 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  440 (502)
                      +..+|+++++||......|+|+.|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||++||||+|.+++
T Consensus       313 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~  392 (446)
T cd07106         313 AKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERA  392 (446)
T ss_pred             HHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence            99999999999976544689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          441 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       441 ~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      +++++++++|.|+||++....+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus       393 ~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~  445 (446)
T cd07106         393 EAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN  445 (446)
T ss_pred             HHHHHhCCccEEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence            99999999999999998877889999999999999999999999999999985


No 69 
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related  sequences are included in this CD.  The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+  and exhibited a broad substrate preference, including vanillin,  benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=100.00  E-value=1.4e-94  Score=755.41  Aligned_cols=448  Identities=39%  Similarity=0.660  Sum_probs=425.5

Q ss_pred             EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Q 010735           39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA  118 (502)
Q Consensus        39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~  118 (502)
                      ++++||+||+++++++.++.+|++++++.|++|++  .|+.++.++|.++|++++++|+++.++|++++++|+|||+.++
T Consensus         1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   78 (451)
T cd07150           1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFP--AWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKA   78 (451)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence            35789999999999999999999999999999999  8999999999999999999999999999999999999999965


Q ss_pred             hhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCC
Q 010735          119 KMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ  197 (502)
Q Consensus       119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~  197 (502)
                       ..|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus        79 -~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~  157 (451)
T cd07150          79 -WFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEE  157 (451)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCcc
Confidence             56999999999999988877655444332 3456789999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceE
Q 010735          198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL  277 (502)
Q Consensus       198 ~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~i  277 (502)
                      +|.++..+++++.++|+|+|+++++++++.+.+..|+.|+++|.|.||||+.+|+.|++.++ .+++|+++|+|||||+|
T Consensus       158 ~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa-~~~~~~~lelGG~~~~i  236 (451)
T cd07150         158 TPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAG-RHLKKITLELGGKNPLI  236 (451)
T ss_pred             CcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCceEeecCCCCeeE
Confidence            99999999999999999999999999977778999999999999999999999999999987 78999999999999999


Q ss_pred             EccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHH
Q 010735          278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY  357 (502)
Q Consensus       278 V~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~  357 (502)
                      |++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus       237 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~  316 (451)
T cd07150         237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQ  316 (451)
T ss_pred             ECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCH
Q 010735          358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL  437 (502)
Q Consensus       358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~  437 (502)
                      +++++.+|+++++||..   +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus       317 i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~  393 (451)
T cd07150         317 VEDAVAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDL  393 (451)
T ss_pred             HHHHHhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCH
Confidence            99999999999999864   589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcceeEEEEcCcCCCC-CCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          438 NVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       438 ~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      ++++++++++++|.|+||++.... +.+||||+|.||+|+++|++|+++|++.|+++
T Consensus       394 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~  450 (451)
T cd07150         394 QRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWIT  450 (451)
T ss_pred             HHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEe
Confidence            999999999999999999987644 67899999999999999999999999999985


No 70 
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=100.00  E-value=5.5e-94  Score=750.86  Aligned_cols=446  Identities=36%  Similarity=0.615  Sum_probs=422.4

Q ss_pred             EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Q 010735           39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA  118 (502)
Q Consensus        39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~  118 (502)
                      ++++||+||+++++++.++.+|++++++.|++|++  .|+.+|.++|.++|++++++|.++.++|++++++|+|||..++
T Consensus         1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a   78 (453)
T cd07094           1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAE--NRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDA   78 (453)
T ss_pred             CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence            36789999999999999999999999999999999  8999999999999999999999999999999999999999976


Q ss_pred             hhccHHHHHHHHHHHHHhhhhhcCeeeecc-----cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEe
Q 010735          119 KMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK  193 (502)
Q Consensus       119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~k  193 (502)
                       ..|+..+++.+++++..+++..+...+..     .+...+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus        79 -~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~K  157 (453)
T cd07094          79 -RVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLK  157 (453)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEE
Confidence             46999999999999988776655433322     234567889999999999999999999999999999999999999


Q ss_pred             cCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCC
Q 010735          194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK  273 (502)
Q Consensus       194 ps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~  273 (502)
                      ||+.+|+++..+++++.++|+|+|+++++++++.++++.|+.||++|.|.||||+++|+.|++.+   .++|+++|+|||
T Consensus       158 ps~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a---~~~~~~lelGGk  234 (453)
T cd07094         158 PASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA---GGKRIALELGGN  234 (453)
T ss_pred             CCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc---CCCceEEecCCC
Confidence            99999999999999999999999999999997777899999999999999999999999999986   478999999999


Q ss_pred             CceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHH
Q 010735          274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR  353 (502)
Q Consensus       274 ~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~  353 (502)
                      ||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++.+||++++.++++
T Consensus       235 ~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~  314 (453)
T cd07094         235 APVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAER  314 (453)
T ss_pred             CceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735          354 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM  433 (502)
Q Consensus       354 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~  433 (502)
                      +.+++++++++|+++++||..   .|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||++|||
T Consensus       315 ~~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~  391 (453)
T cd07094         315 VERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIF  391 (453)
T ss_pred             HHHHHHHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEE
Confidence            999999999999999999864   58899999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          434 TKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       434 t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      |+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|++|+++|++.|+|+
T Consensus       392 t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~  452 (453)
T cd07094         392 TRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV  452 (453)
T ss_pred             CCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence            999999999999999999999998654 578999999999999999999999999999985


No 71 
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=100.00  E-value=1.2e-93  Score=756.16  Aligned_cols=466  Identities=33%  Similarity=0.474  Sum_probs=432.9

Q ss_pred             eeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735           24 LFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (502)
Q Consensus        24 ~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (502)
                      .||+|+|+.  ++.+++++||+| |+++++++.++.+|++++++.|++|++  .|+.++.++|.++|++++++|+++.++
T Consensus        35 p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~  110 (518)
T cd07125          35 PIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFA--GWSATPVEERAEILEKAADLLEANRGE  110 (518)
T ss_pred             ceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence            589999983  578999999999 999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCe-eeecccccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (502)
Q Consensus       103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~  181 (502)
                      |++++++|+|||+.++ ..|+..+++.+++++..+++..+. ..+...+...+.+++|+|||++|+|||||+...+++++
T Consensus       111 la~~~~~e~Gk~~~~a-~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~  189 (518)
T cd07125         111 LIALAAAEAGKTLADA-DAEVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIA  189 (518)
T ss_pred             HHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHHHH
Confidence            9999999999999976 469999999999999887765433 22322345568899999999999999999999999999


Q ss_pred             HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (502)
Q Consensus       182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~  261 (502)
                      +||++||+||+|||+.+|+++..+++++.++|+|+|+++++++++.+.+..|+.|+++|.|+||||+++|+.|++.++..
T Consensus       190 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~  269 (518)
T cd07125         190 AALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAER  269 (518)
T ss_pred             HHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhc
Confidence            99999999999999999999999999999999999999999997666889999999999999999999999999987622


Q ss_pred             --CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735          262 --NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA  339 (502)
Q Consensus       262 --~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~  339 (502)
                        ..+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++
T Consensus       270 ~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~  349 (518)
T cd07125         270 DGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLS  349 (518)
T ss_pred             cCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCC
Confidence              278999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeC--CHHHH
Q 010735          340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEA  417 (502)
Q Consensus       340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~ea  417 (502)
                      +++||++++.+++++.++++++.. ++++++||......|+|+.|||+.++  +|++++||+||||++|++|+  |+|||
T Consensus       350 ~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deA  426 (518)
T cd07125         350 TDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEA  426 (518)
T ss_pred             CCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHH
Confidence            999999999999999999999987 46899998764336899999999887  89999999999999999999  99999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC--CCCCCcCCCCCCCCCC-cchHHHHHhhhhccEEEE
Q 010735          418 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFGR-DCGLESLHNYLQVKSVVT  494 (502)
Q Consensus       418 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~g~-~~g~~~~~~~~~~k~v~~  494 (502)
                      |+++|+++|||++||||+|.+.++++++++++|.|+||+....  .+.+||||+|.||+|+ ++|++++++|++.|++++
T Consensus       427 i~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~  506 (518)
T cd07125         427 IEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSL  506 (518)
T ss_pred             HHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEEE
Confidence            9999999999999999999999999999999999999997653  3678999999999995 788999999999999988


Q ss_pred             ecC
Q 010735          495 PIF  497 (502)
Q Consensus       495 ~~~  497 (502)
                      ++.
T Consensus       507 ~~~  509 (518)
T cd07125         507 NTT  509 (518)
T ss_pred             Ecc
Confidence            763


No 72 
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=100.00  E-value=7.9e-94  Score=771.04  Aligned_cols=462  Identities=25%  Similarity=0.322  Sum_probs=419.5

Q ss_pred             ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (502)
Q Consensus        23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (502)
                      ++||||+|+.+ ++.+++++||+||+++++++.++ .|+++|+++|++| |+  .|+++|..+|.++|++++++|+++.+
T Consensus         2 ~~~i~g~~~~~-~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~--~W~~~~~~eR~~~L~~~a~~l~~~~~   77 (663)
T TIGR02278         2 QSYLSGEWRTG-QGEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGP--ALRALTFHERARMLKALAQYLSERKE   77 (663)
T ss_pred             ceeECCEEEcC-CCCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcch--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence            57999999976 35789999999999999999999 6999999999996 99  89999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhc--------Ceeeecc-c-ccccceeecCC-eEEEEEcCCC
Q 010735          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH--------GEVLKMS-R-ALQGYTLREPI-GVVGHIIPWN  170 (502)
Q Consensus       102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~-~-~~~~~~~~~P~-Gvv~~i~p~n  170 (502)
                      +|++ +++|+|||+.++ ..|+..+++.+++++.++++..        +...+.. . ....++.++|+ |||++|+|||
T Consensus        78 ela~-~~~e~GK~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN  155 (663)
T TIGR02278        78 ALYA-LAATTGATRRDN-WVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFN  155 (663)
T ss_pred             HHHH-HHHHcCCCHHHH-HHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCc
Confidence            9999 599999999975 5699999999999998876522        3322221 1 12467899998 9999999999


Q ss_pred             hhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcC-CCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcH
Q 010735          171 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD  249 (502)
Q Consensus       171 ~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aG-lP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~  249 (502)
                      ||+..+++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+++++.   +..+..++++|.|.||||++
T Consensus       156 ~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~~~~~~V~FTGS~~  232 (663)
T TIGR02278       156 FPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHLDHRDVVAFTGSAA  232 (663)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcCCCCCEEEEECCHH
Confidence            9999999999999999999999999999999999999999999 9999999999842   23333347789999999999


Q ss_pred             HHHHHHHHH-hcCCCCceEEecCCCCceEEccCCC-----HHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHH
Q 010735          250 VGRQVMQAA-ATSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL  323 (502)
Q Consensus       250 ~g~~i~~~a-a~~~~~~~~~e~gG~~~~iV~~dad-----l~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l  323 (502)
                      +|+.|++.+ +...++|+++|+|||||+||++|||     ++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       233 ~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l  312 (663)
T TIGR02278       233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKAL  312 (663)
T ss_pred             HHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHH
Confidence            999999874 2367899999999999999999999     9999999999999999999999999999999999999999


Q ss_pred             HHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCC-ccccccee
Q 010735          324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDM-LIAKNEIF  402 (502)
Q Consensus       324 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~-~~~~~E~f  402 (502)
                      +++++++++|+|.++++++||++++.++++++++|++|+++|+++++||.... +|+|++|||+.+++++| ++++||+|
T Consensus       313 ~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-~g~~~~PTvl~~~~~~~~~i~~eE~F  391 (663)
T TIGR02278       313 QARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRL-DGAFFPPTLLLAEDPWAGAVHATEAF  391 (663)
T ss_pred             HHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCC-CCeeEccEEEeeCCcchhhHHhcccc
Confidence            99999999999999999999999999999999999999999999999997643 58999999999998876 79999999


Q ss_pred             eceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc--ceeEEEE-cCc-------C-CCCCCCCcCCCCC
Q 010735          403 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI--RAGIIWI-NCY-------F-AFDSDCPYGGYKM  471 (502)
Q Consensus       403 gPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l--~~g~v~i-N~~-------~-~~~~~~pfgG~~~  471 (502)
                      |||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++  ++|.|+| |..       . ...+.+||||+|.
T Consensus       392 GPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~  471 (663)
T TIGR02278       392 GPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGR  471 (663)
T ss_pred             CCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCcc
Confidence            999999999999999999999999999999999999999999999  8999999 641       1 1236789999999


Q ss_pred             CCCCCc-chHHHHHhhhhccEEEE
Q 010735          472 SGFGRD-CGLESLHNYLQVKSVVT  494 (502)
Q Consensus       472 SG~g~~-~g~~~~~~~~~~k~v~~  494 (502)
                      ||+|++ +|.+++++|++.|+|..
T Consensus       472 SG~G~~~g~~~~l~~f~~~k~v~~  495 (663)
T TIGR02278       472 AGGGEELGGLRSVKHYMQRTAIQG  495 (663)
T ss_pred             CcCCCccchHHHHHHhceeEEEEc
Confidence            999999 46899999999999854


No 73 
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate.  SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=100.00  E-value=6.7e-94  Score=749.40  Aligned_cols=447  Identities=36%  Similarity=0.592  Sum_probs=418.0

Q ss_pred             ecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhc
Q 010735           42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG  121 (502)
Q Consensus        42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~  121 (502)
                      .||+||+++++++.++.+|++++++.|++|++  .|+.++.++|.++|++++++|+++.++|++++++|+|||..++ ..
T Consensus         1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a-~~   77 (454)
T cd07101           1 EAPFTGEPLGELPQSTPADVEAAFARARAAQR--AWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHA-FE   77 (454)
T ss_pred             CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHH-HH
Confidence            48999999999999999999999999999999  8999999999999999999999999999999999999999975 57


Q ss_pred             cHHHHHHHHHHHHHhhhhhcCee-eec--ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCc
Q 010735          122 DIPGAANTLRYYAGAADKIHGEV-LKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT  198 (502)
Q Consensus       122 ev~~~~~~l~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~  198 (502)
                      |+..+++.+++++..+.+..... .+.  ......+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus        78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~  157 (454)
T cd07101          78 EVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQT  157 (454)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence            99999999999998776544322 111  112356889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEE
Q 010735          199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI  278 (502)
Q Consensus       199 ~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV  278 (502)
                      |+++..+.+++.++|+|+|+++++++++.+.++.|+.|  +|.|.||||+.+|+.|++.++ ..++|+++|+|||||+||
T Consensus       158 p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa-~~~~~~~lElgG~~p~iV  234 (454)
T cd07101         158 ALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAG-RRLIGCSLELGGKNPMIV  234 (454)
T ss_pred             hHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHH-hcCCcEEEECCCCceEEE
Confidence            99999999999999999999999999877888999987  578999999999999999987 788999999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHH
Q 010735          279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI  358 (502)
Q Consensus       279 ~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i  358 (502)
                      ++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++++++
T Consensus       235 ~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v  314 (454)
T cd07101         235 LEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHV  314 (454)
T ss_pred             CCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCH
Q 010735          359 EHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL  437 (502)
Q Consensus       359 ~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~  437 (502)
                      ++++.+|+++++||.... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus       315 ~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~  394 (454)
T cd07101         315 DDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDG  394 (454)
T ss_pred             HHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence            999999999999997533 2579999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcceeEEEEcCcCC---CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735          438 NVANTVSRSIRAGIIWINCYFA---FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT  494 (502)
Q Consensus       438 ~~~~~~~~~l~~g~v~iN~~~~---~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~  494 (502)
                      ++++++++++++|.|+||++..   ..+.+||||+|.||+|+++|++|+++|++.|++++
T Consensus       395 ~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~~  454 (454)
T cd07101         395 ARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV  454 (454)
T ss_pred             HHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEeC
Confidence            9999999999999999999754   34678999999999999999999999999999863


No 74 
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions.  This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3  and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=100.00  E-value=2e-93  Score=750.02  Aligned_cols=465  Identities=35%  Similarity=0.509  Sum_probs=436.8

Q ss_pred             cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHHHHHHHHhH
Q 010735           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRF-SGAERRGIMLKFADLIEEHA  100 (502)
Q Consensus        22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~-~~~~R~~~L~~~a~~l~~~~  100 (502)
                      +++||||+|+.+. +.+++++||+||+++++++.++.+|+++++++|++|++  .|+.+ +.++|.++|++++++|.+++
T Consensus         2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~~R~~~L~~~a~~l~~~~   78 (473)
T cd07082           2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGR--GWWPTMPLEERIDCLHKFADLLKENK   78 (473)
T ss_pred             CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence            3579999999864 68899999999999999999999999999999999999  89988 99999999999999999999


Q ss_pred             HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-----cccccceeecCCeEEEEEcCCChhHHh
Q 010735          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTM  175 (502)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~  175 (502)
                      ++|++++++|+|||..++ ..|+..+++.++++++..+++.+...+..     .+...+.+++|+|||++|+|||||+..
T Consensus        79 ~el~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~  157 (473)
T cd07082          79 EEVANLLMWEIGKTLKDA-LKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNL  157 (473)
T ss_pred             HHHHHHHHHHcCCcHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHH
Confidence            999999999999999976 46999999999999988776654433211     244567899999999999999999999


Q ss_pred             hhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHH
Q 010735          176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM  255 (502)
Q Consensus       176 ~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~  255 (502)
                      .++++++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++.++++.|+.|+++|.|.||||+++|+.|.
T Consensus       158 ~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~  237 (473)
T cd07082         158 TVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK  237 (473)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999997777899999999999999999999999999


Q ss_pred             HHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCC
Q 010735          256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP  335 (502)
Q Consensus       256 ~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~  335 (502)
                      +.++   ++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|
T Consensus       238 ~~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~  314 (473)
T cd07082         238 KQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMP  314 (473)
T ss_pred             HHhC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCC
Confidence            8864   7999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHH
Q 010735          336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE  415 (502)
Q Consensus       336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~  415 (502)
                      .++++++||++++.++++++++++++..+|+++++||...  .|+|+.|||+.++++++++++||+||||++|++|+|++
T Consensus       315 ~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~  392 (473)
T cd07082         315 WDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIE  392 (473)
T ss_pred             CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHH
Confidence            9999999999999999999999999999999999999764  48999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCC-CCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735          416 EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT  494 (502)
Q Consensus       416 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~  494 (502)
                      |||+++|+++|||+++|||+|.+.++++++++++|+|+||++.... +.+||||+|.||+|+++|.+|+++|++.|++++
T Consensus       393 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~  472 (473)
T cd07082         393 EAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVI  472 (473)
T ss_pred             HHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEEE
Confidence            9999999999999999999999999999999999999999977544 568999999999999999999999999999875


Q ss_pred             e
Q 010735          495 P  495 (502)
Q Consensus       495 ~  495 (502)
                      +
T Consensus       473 ~  473 (473)
T cd07082         473 N  473 (473)
T ss_pred             C
Confidence            3


No 75 
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=100.00  E-value=1.3e-93  Score=751.58  Aligned_cols=466  Identities=24%  Similarity=0.348  Sum_probs=417.7

Q ss_pred             cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhc-ccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735           20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF-DHGPWPRFSGAERRGIMLKFADLIEE   98 (502)
Q Consensus        20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~-~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (502)
                      ...++||||+|+.+ ++.+++++||+||+++++++. +.+|+++|++.|++|+ +  .|+++|..+|.++|++++++|++
T Consensus         3 ~~~~~~i~G~~~~~-~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~--~W~~~~~~eR~~~L~~~a~~l~~   78 (521)
T PRK11903          3 ELLANYVAGRWQAG-SGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGA--ALRALTYAQRAALLAAIVKVLQA   78 (521)
T ss_pred             chhhhhCCCEEEcC-CCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhh--hhhhCCHHHHHHHHHHHHHHHHH
Confidence            34468999999975 356899999999999999997 8899999999999995 8  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc---------cccccceeecC-CeEEEEEcC
Q 010735           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---------RALQGYTLREP-IGVVGHIIP  168 (502)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~P-~Gvv~~i~p  168 (502)
                      ++++|++++++|+|||+.++ ..|+..+++.+++++.+++.+.+......         .....++.++| +|||++|+|
T Consensus        79 ~~~ela~~~~~e~Gkp~~~a-~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~p  157 (521)
T PRK11903         79 NRDAYYDIATANSGTTRNDS-AVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINA  157 (521)
T ss_pred             HHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECC
Confidence            99999999999999999975 56999999999999998766543211100         11234677899 699999999


Q ss_pred             CChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcC-CCCceEEEecCCchhHHHHHHhCCCcCEEEEcCC
Q 010735          169 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS  247 (502)
Q Consensus       169 ~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aG-lP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs  247 (502)
                      ||||+..+++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++++++|++.++...|   +++|.|.||||
T Consensus       158 wN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS  234 (521)
T PRK11903        158 FNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGS  234 (521)
T ss_pred             cchHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECC
Confidence            999999999999999999999999999999999999999999999 99999999998655554443   78999999999


Q ss_pred             cHHHHHHHHHH-hcCCCCceEEecCCCCceEEccCCC-----HHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHH
Q 010735          248 TDVGRQVMQAA-ATSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK  321 (502)
Q Consensus       248 ~~~g~~i~~~a-a~~~~~~~~~e~gG~~~~iV~~dad-----l~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~  321 (502)
                      +++|+.|++.+ +...++|+++|+|||||+||++|||     ++.+++.+++++|.|+||.|++++|||||+++||+|++
T Consensus       235 ~~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~  314 (521)
T PRK11903        235 AETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAE  314 (521)
T ss_pred             HHHHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHH
Confidence            99999999864 2367899999999999999999999     59999999999999999999999999999999999999


Q ss_pred             HHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc------CCCCceEecEEEeeCCC--C
Q 010735          322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI------GKKGYYIEPTIFTNVTE--D  393 (502)
Q Consensus       322 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~------~~~g~~~~Ptvl~~~~~--~  393 (502)
                      +|+++++++++|+|.++++++|||+++.+++++.++|+. ..+|+++++||...      ..+|+|++|||+.++++  +
T Consensus       315 ~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~-~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~  393 (521)
T PRK11903        315 ALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAA-LRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAA  393 (521)
T ss_pred             HHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHH-HhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCcc
Confidence            999999999999999999999999999999999999986 45799999999652      12589999999986554  4


Q ss_pred             CcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc--ceeEEEEcCcCC---------CCC
Q 010735          394 MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI--RAGIIWINCYFA---------FDS  462 (502)
Q Consensus       394 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~---------~~~  462 (502)
                      +++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++  ++|+|+||+...         ..+
T Consensus       394 ~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~  473 (521)
T PRK11903        394 TAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMP  473 (521)
T ss_pred             chHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCC
Confidence            789999999999999999999999999999999999999999999999999999  899999997532         346


Q ss_pred             CCCcCCCCCCCCCCcc-hHHHHHhhhhccEEEE
Q 010735          463 DCPYGGYKMSGFGRDC-GLESLHNYLQVKSVVT  494 (502)
Q Consensus       463 ~~pfgG~~~SG~g~~~-g~~~~~~~~~~k~v~~  494 (502)
                      .+||||+|.||+|+++ |.+++++|++.|++..
T Consensus       474 ~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~~  506 (521)
T PRK11903        474 QSLHGGPGRAGGGEELGGLRALAFYHRRSAVQA  506 (521)
T ss_pred             CCCCCCCCcCcCCcccccHHHHHHHhccceeeC
Confidence            7899999999999985 4899999999888754


No 76 
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=100.00  E-value=1.6e-93  Score=747.58  Aligned_cols=452  Identities=48%  Similarity=0.815  Sum_probs=425.4

Q ss_pred             eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (502)
Q Consensus        41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~  120 (502)
                      ++||+||+++++++.++.+|+++++++|++|++++.|+.+|.++|.++|++++++|.+++++|++++++|+|||..++ .
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~-~   79 (457)
T cd07114           1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRET-R   79 (457)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH-H
Confidence            479999999999999999999999999999996214999999999999999999999999999999999999999975 5


Q ss_pred             ccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcH
Q 010735          121 GDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP  199 (502)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~  199 (502)
                      .|+..+++.+++++.+.+.+.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        80 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p  159 (457)
T cd07114          80 AQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTP  159 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccch
Confidence            6999999999999887766544433322 344568899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEc
Q 010735          200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF  279 (502)
Q Consensus       200 ~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~  279 (502)
                      .++..++++|.++|+|+++|+++++++.+.+..|+.|++++.|.||||+.+|+.|++.++ .+++|+++|+|||||+||+
T Consensus       160 ~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~  238 (457)
T cd07114         160 ASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAA-ENLAPVTLELGGKSPNIVF  238 (457)
T ss_pred             HHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeEEEecCCCCeeEEC
Confidence            999999999999999999999999977778899999999999999999999999999987 7889999999999999999


Q ss_pred             cCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 010735          280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE  359 (502)
Q Consensus       280 ~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~  359 (502)
                      +|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++++++++++
T Consensus       239 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~  318 (457)
T cd07114         239 DDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVA  318 (457)
T ss_pred             CCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecC
Q 010735          360 HGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK  435 (502)
Q Consensus       360 ~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~  435 (502)
                      +++++|+++++||....    ..|.|++|||+.+++++++++++|+||||++|++|+|+||||+++|+++|||++||||+
T Consensus       319 ~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~  398 (457)
T cd07114         319 RAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTR  398 (457)
T ss_pred             HHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECC
Confidence            99999999999997643    25899999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735          436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT  494 (502)
Q Consensus       436 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~  494 (502)
                      |.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|.+|+++|++.|++++
T Consensus       399 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~  457 (457)
T cd07114         399 DLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVWI  457 (457)
T ss_pred             CHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceeEEeC
Confidence            99999999999999999999987777889999999999999999999999999999853


No 77 
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=100.00  E-value=2e-93  Score=746.50  Aligned_cols=448  Identities=42%  Similarity=0.703  Sum_probs=423.0

Q ss_pred             eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (502)
Q Consensus        41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~  120 (502)
                      ++||+||+++++++.++.+|++++++.|++|++  .|+.++.++|.++|++++++|.++.++|++++++|+|||..++..
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~   78 (450)
T cd07092           1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFP--SWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRD   78 (450)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH
Confidence            479999999999999999999999999999999  899999999999999999999999999999999999999986656


Q ss_pred             ccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcH
Q 010735          121 GDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP  199 (502)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~  199 (502)
                      .|+..+++.+++++...+.+.+...+. ..+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|
T Consensus        79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~  158 (450)
T cd07092          79 DELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTP  158 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence            699999999999998776554432211 1233567899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEc
Q 010735          200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF  279 (502)
Q Consensus       200 ~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~  279 (502)
                      .++..+.++|.+ |+|+|+++++++++.+.++.|+.|+++|.|.||||+.+|+.|++.++ .+++|+++|+|||||+||+
T Consensus       159 ~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~-~~~~~~~lelgG~~p~iV~  236 (450)
T cd07092         159 LTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAA-DTLKRVHLELGGKAPVIVF  236 (450)
T ss_pred             HHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCCcEEEECCCCCeeEEC
Confidence            999999999999 99999999999877678899999999999999999999999999987 7899999999999999999


Q ss_pred             cCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 010735          280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE  359 (502)
Q Consensus       280 ~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~  359 (502)
                      +|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++++++++++
T Consensus       237 ~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~  316 (450)
T cd07092         237 DDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVE  316 (450)
T ss_pred             CCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 010735          360 HGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV  439 (502)
Q Consensus       360 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  439 (502)
                      ++. +|+++++||......|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++||||+|.+.
T Consensus       317 ~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~  395 (450)
T cd07092         317 RAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGR  395 (450)
T ss_pred             HHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence            998 9999999997654578999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          440 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       440 ~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      ++++++++++|.|+||++....+.+||||+|.||+|+++|++++++|++.|+++
T Consensus       396 ~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~  449 (450)
T cd07092         396 AMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM  449 (450)
T ss_pred             HHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence            999999999999999998877788999999999999999999999999999985


No 78 
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=100.00  E-value=2.5e-93  Score=746.10  Aligned_cols=447  Identities=34%  Similarity=0.526  Sum_probs=423.0

Q ss_pred             ecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhc
Q 010735           42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG  121 (502)
Q Consensus        42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~  121 (502)
                      +||+||+++++++.++.+|++++++.|++|++  .|+.++.++|.++|++++++|+++.++|++++++|+|||..++ ..
T Consensus         1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~-~~   77 (452)
T cd07102           1 ISPIDGSVIAERPLASLEAVRAALERARAAQK--GWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQA-GG   77 (452)
T ss_pred             CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHH-HH
Confidence            58999999999999999999999999999999  8999999999999999999999999999999999999999975 57


Q ss_pred             cHHHHHHHHHHHHHhhhhhcCee-eecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHH
Q 010735          122 DIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL  200 (502)
Q Consensus       122 ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~  200 (502)
                      |+..+++.+++++..+++..+.. .+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus        78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~  157 (452)
T cd07102          78 EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPL  157 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence            99999999999988776654332 22233445678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEcc
Q 010735          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD  280 (502)
Q Consensus       201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~  280 (502)
                      ++..+.++|.++|+|+|++|++++++ +.+..|+.||++|.|.||||+++|+.|++.++ ...+|+.+|+|||||+||++
T Consensus       158 ~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~-~~~~~v~lelgG~~~~iV~~  235 (452)
T cd07102         158 CGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAA-GRFIKVGLELGGKDPAYVRP  235 (452)
T ss_pred             HHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCcEEEECCCCCceEEcC
Confidence            99999999999999999999999966 78999999999999999999999999999877 78899999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 010735          281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH  360 (502)
Q Consensus       281 dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~  360 (502)
                      |||++.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++
T Consensus       236 dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~  315 (452)
T cd07102         236 DADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIAD  315 (452)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCEEEeCCccc---CCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCH
Q 010735          361 GKREGATLLTGGKPI---GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL  437 (502)
Q Consensus       361 a~~~Ga~v~~gg~~~---~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~  437 (502)
                      ++.+|+++++||...   ...|+|+.|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus       316 a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~  395 (452)
T cd07102         316 AIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDI  395 (452)
T ss_pred             HHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence            999999999999753   23689999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       438 ~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      ++++++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++|++.|+++
T Consensus       396 ~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~  451 (452)
T cd07102         396 ARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH  451 (452)
T ss_pred             HHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence            99999999999999999998777778999999999999999999999999999985


No 79 
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=100.00  E-value=2.4e-93  Score=745.87  Aligned_cols=446  Identities=36%  Similarity=0.601  Sum_probs=418.7

Q ss_pred             EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Q 010735           39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA  118 (502)
Q Consensus        39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~  118 (502)
                      ++++||+||+++++++.++.+|+++++++|++|++  .|++++.++|.++|++++++|.++.++|++++++|+|||+.++
T Consensus         1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a   78 (452)
T cd07147           1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDA   78 (452)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence            36899999999999999999999999999999999  8999999999999999999999999999999999999999975


Q ss_pred             hhccHHHHHHHHHHHHHhhhhhcCeeeecc-----cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEe
Q 010735          119 KMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK  193 (502)
Q Consensus       119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~k  193 (502)
                       ..|+..+++.+++++..+.+..++..+..     .+...++.++|+|||++|+|||||+...++++++||++||+||+|
T Consensus        79 -~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlK  157 (452)
T cd07147          79 -RGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLK  157 (452)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence             46999999999999887765444322211     234567889999999999999999999999999999999999999


Q ss_pred             cCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCC
Q 010735          194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK  273 (502)
Q Consensus       194 ps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~  273 (502)
                      ||+.+|.++..++++|.++|+|+|++++++++ .+.+..|+.|+++|.|.||||+.+|+.|++.++   .+|+++|+|||
T Consensus       158 ps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~---~~~v~lelgG~  233 (452)
T cd07147         158 PASRTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAG---KKKVVLELGGN  233 (452)
T ss_pred             CCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhC---cCceEeecCCC
Confidence            99999999999999999999999999999984 467899999999999999999999999999865   47999999999


Q ss_pred             CceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHH
Q 010735          274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR  353 (502)
Q Consensus       274 ~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~  353 (502)
                      ||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus       234 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~  313 (452)
T cd07147         234 AAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAER  313 (452)
T ss_pred             CcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735          354 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM  433 (502)
Q Consensus       354 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~  433 (502)
                      +.+++++++++|+++++||..   .|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++|||
T Consensus       314 ~~~~i~~a~~~Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~  390 (452)
T cd07147         314 VEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVF  390 (452)
T ss_pred             HHHHHHHHHHCCCEEEecCCc---CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence            999999999999999999975   58999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735          434 TKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT  494 (502)
Q Consensus       434 t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~  494 (502)
                      |+|.++++++++++++|.|+||+.+.. .+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus       391 t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~  452 (452)
T cd07147         391 TRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI  452 (452)
T ss_pred             CCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence            999999999999999999999997654 4678999999999999999999999999999863


No 80 
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=100.00  E-value=6e-93  Score=744.66  Aligned_cols=451  Identities=29%  Similarity=0.443  Sum_probs=420.0

Q ss_pred             cceeEcCeEeeCCCCCeEEeecCCCC-ceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 010735           22 TKLFINGEFVDSVSGKTFETIDPRTG-EAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA  100 (502)
Q Consensus        22 ~~~~i~G~~~~~~~~~~~~v~~P~tg-~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  100 (502)
                      +++||||+|+.  ++.+++++||+|+ +++++++.++.+|+++++++|++||+  .|+.+|..+|.++|++++++|+++.
T Consensus        38 ~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~  113 (500)
T TIGR01238        38 AAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFP--TWNATPAKERAAKLDRLADLLELHM  113 (500)
T ss_pred             cCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHH
Confidence            47899999987  5778999999996 89999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV  180 (502)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i  180 (502)
                      ++|++++++|+|||..++ ..|+..+++.+++++...+...+           ...++|+|||++|+|||||+...++++
T Consensus       114 ~ela~~~~~e~Gk~~~~a-~~ev~~~i~~l~~~a~~~~~~~~-----------~~~~~P~GVV~~I~pwN~P~~~~~~~i  181 (500)
T TIGR01238       114 PELMALCVREAGKTIHNA-IAEVREAVDFCRYYAKQVRDVLG-----------EFSVESRGVFVCISPWNFPLAIFTGQI  181 (500)
T ss_pred             HHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-----------ceeccCcceEEEECCCchHHHHHHHHH
Confidence            999999999999999975 56999999999999987754321           136899999999999999999999999


Q ss_pred             HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735          181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT  260 (502)
Q Consensus       181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~  260 (502)
                      ++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|+.|+++|.|.||||+.+|+.|++.++ 
T Consensus       182 ~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa-  260 (500)
T TIGR01238       182 SAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLA-  260 (500)
T ss_pred             HHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHh-
Confidence            9999999999999999999999999999999999999999999876678999999999999999999999999999887 


Q ss_pred             CCC---CceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735          261 SNL---KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD  337 (502)
Q Consensus       261 ~~~---~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~  337 (502)
                      .+.   +|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus       261 ~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~  340 (500)
T TIGR01238       261 QREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHL  340 (500)
T ss_pred             hcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCC
Confidence            444   79999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc---ccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeC--
Q 010735          338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK---PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--  412 (502)
Q Consensus       338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~---~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--  412 (502)
                      +++++||++++.+++++.++++++++.|++++.++.   ....+|+|++|||+.+  ++|.++++|+||||++|++|+  
T Consensus       341 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~~  418 (500)
T TIGR01238       341 LTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKAR  418 (500)
T ss_pred             CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCCC
Confidence            999999999999999999999999999999875432   1223699999999973  688899999999999999998  


Q ss_pred             CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC--CCCCCcCCCCCCCCC-CcchHHHHHhhhhc
Q 010735          413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFG-RDCGLESLHNYLQV  489 (502)
Q Consensus       413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~  489 (502)
                      ++||||+++|+++|||+++|||+|.+.++++++++++|.|+||+....  .+.+||||+|.||+| +++|.+++++|++.
T Consensus       419 ~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~~  498 (500)
T TIGR01238       419 ELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQV  498 (500)
T ss_pred             CHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHhh
Confidence            799999999999999999999999999999999999999999997653  256799999999999 89999999999998


Q ss_pred             cE
Q 010735          490 KS  491 (502)
Q Consensus       490 k~  491 (502)
                      |.
T Consensus       499 k~  500 (500)
T TIGR01238       499 QY  500 (500)
T ss_pred             cC
Confidence            73


No 81 
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=100.00  E-value=4.1e-93  Score=744.56  Aligned_cols=448  Identities=42%  Similarity=0.723  Sum_probs=421.6

Q ss_pred             eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH-HHHh
Q 010735           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH-SWAK  119 (502)
Q Consensus        41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~-~~~~  119 (502)
                      ++||+||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|++++++|+++.++|++++++|+|||. .++ 
T Consensus         1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a-   77 (457)
T cd07108           1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFP--EWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQA-   77 (457)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHH-
Confidence            579999999999999999999999999999999  8999999999999999999999999999999999999997 554 


Q ss_pred             hccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcH
Q 010735          120 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP  199 (502)
Q Consensus       120 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~  199 (502)
                      ..|+..+++.+++++.+...+.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        78 ~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p  157 (457)
T cd07108          78 RPEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAP  157 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCceeccCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence            57999999999999987766655544433344567889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEc
Q 010735          200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF  279 (502)
Q Consensus       200 ~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~  279 (502)
                      .++..+.+++.++ +|+|+++++++++.+.++.|+.|+++|.|.||||+.+|+.|++.++ .+++|+++|+|||||+||+
T Consensus       158 ~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa-~~l~~~~lelgG~~~~iV~  235 (457)
T cd07108         158 LAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAA-DRLIPVSLELGGKSPMIVF  235 (457)
T ss_pred             HHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHh-ccCCeEEEECCCCCeeEEC
Confidence            9999999999987 9999999999877778899999999999999999999999999987 7889999999999999999


Q ss_pred             cCCCHHHHHHHHHHH-HhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHH
Q 010735          280 DDVDVNTAADMALLG-ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYI  358 (502)
Q Consensus       280 ~dadl~~aa~~iv~~-~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i  358 (502)
                      +|||++.|++.++++ +|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++
T Consensus       236 ~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i  315 (457)
T cd07108         236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYI  315 (457)
T ss_pred             CCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence            999999999999999 5999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHH-cCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735          359 EHGKR-EGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM  433 (502)
Q Consensus       359 ~~a~~-~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~  433 (502)
                      +++++ +|+++++||..+.    ..|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++|||
T Consensus       316 ~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vf  395 (457)
T cd07108         316 DLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVW  395 (457)
T ss_pred             HHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEE
Confidence            99998 9999999997642    358999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHH-HHhhhhccEEE
Q 010735          434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES-LHNYLQVKSVV  493 (502)
Q Consensus       434 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~-~~~~~~~k~v~  493 (502)
                      |+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.++ +++|++.|+++
T Consensus       396 t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~  456 (457)
T cd07108         396 TRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN  456 (457)
T ss_pred             cCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence            9999999999999999999999987777889999999999999999966 79999999885


No 82 
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=100.00  E-value=7.4e-93  Score=768.82  Aligned_cols=467  Identities=25%  Similarity=0.340  Sum_probs=420.2

Q ss_pred             cccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHH
Q 010735           18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLI   96 (502)
Q Consensus        18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l   96 (502)
                      |++..++||||+|+.+ ++.+++++||+||+++++++.++ +|+++|+++|++| |+  .|+++|..+|.++|++++++|
T Consensus         1 ~~~~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~eR~~~L~~~a~~l   76 (675)
T PRK11563          1 MMQKLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGP--ALRALTFHERAAMLKALAKYL   76 (675)
T ss_pred             CCccccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhh--hhhcCCHHHHHHHHHHHHHHH
Confidence            4566689999999986 56789999999999999999987 6999999999998 78  899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhc--------Ceeeecc-cc-cccceeecCC-eEEEE
Q 010735           97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH--------GEVLKMS-RA-LQGYTLREPI-GVVGH  165 (502)
Q Consensus        97 ~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~-~~-~~~~~~~~P~-Gvv~~  165 (502)
                      +++.++|++ +++|+|||+.++ ..|+..+++.+++++.++++..        ++..+.. .+ ...+..++|+ |||++
T Consensus        77 ~~~~~ela~-l~~e~GK~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~  154 (675)
T PRK11563         77 LERKEELYA-LSAQTGATRRDS-WIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVH  154 (675)
T ss_pred             HHhHHHHHH-HHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEE
Confidence            999999998 589999999976 4699999999999998875432        2222211 11 1246888997 99999


Q ss_pred             EcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcC-CCCceEEEecCCchhHHHHHHhCCCcCEEEE
Q 010735          166 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSF  244 (502)
Q Consensus       166 i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aG-lP~g~~~~v~g~~~~~~~~l~~~~~v~~V~f  244 (502)
                      |+|||||+..+++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+++|+.   +..+..+++++.|.|
T Consensus       155 I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~---~~~~~~~~~i~~v~F  231 (675)
T PRK11563        155 INAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSA---GDLLDHLDGQDVVTF  231 (675)
T ss_pred             ECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCH---HHHhhcCCCCCEEEE
Confidence            999999999999999999999999999999999999999999999999 9999999999853   233444568999999


Q ss_pred             cCCcHHHHHHHHHH-hcCCCCceEEecCCCCceEEccCCC-----HHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHH
Q 010735          245 TGSTDVGRQVMQAA-ATSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVYVQEGIYDE  318 (502)
Q Consensus       245 tGs~~~g~~i~~~a-a~~~~~~~~~e~gG~~~~iV~~dad-----l~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~  318 (502)
                      |||+++|+.|++.+ +..+++|+++|+|||||+||++|||     ++.|++.+++++|.|+||.|++++|||||+++||+
T Consensus       232 TGS~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~  311 (675)
T PRK11563        232 TGSAATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDA  311 (675)
T ss_pred             ECcHHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHH
Confidence            99999999999853 2368999999999999999999995     99999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------CCCCceEecEEEeeCC
Q 010735          319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-------GKKGYYIEPTIFTNVT  391 (502)
Q Consensus       319 f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-------~~~g~~~~Ptvl~~~~  391 (502)
                      |+++|+++++++++|+|.++++++|||+++.+++++.++|++|+++ +++++||...       ..+|+|++|||+.+++
T Consensus       312 f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~  390 (675)
T PRK11563        312 VIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDD  390 (675)
T ss_pred             HHHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccC
Confidence            9999999999999999999999999999999999999999999998 9999999532       1358999999999999


Q ss_pred             C--CCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcc--eeEEEEcCcCC--------
Q 010735          392 E--DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR--AGIIWINCYFA--------  459 (502)
Q Consensus       392 ~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~--------  459 (502)
                      +  ++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++++  +|.||||+.+.        
T Consensus       391 ~~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~  470 (675)
T PRK11563        391 PLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHG  470 (675)
T ss_pred             chhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCC
Confidence            8  57999999999999999999999999999999999999999999999999999997  99999997531        


Q ss_pred             -CCCCCCcCCCCCCCCCCc-chHHHHHhhhhccEEEE
Q 010735          460 -FDSDCPYGGYKMSGFGRD-CGLESLHNYLQVKSVVT  494 (502)
Q Consensus       460 -~~~~~pfgG~~~SG~g~~-~g~~~~~~~~~~k~v~~  494 (502)
                       ..+.+||||+|.||+|++ +|.+++++|++.|+|..
T Consensus       471 ~~~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~  507 (675)
T PRK11563        471 SPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQG  507 (675)
T ss_pred             CCCcCCCcCCCCCCCCCccccchhHHHHhheeeeeec
Confidence             126789999999999999 46999999999998753


No 83 
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=100.00  E-value=1.4e-92  Score=740.75  Aligned_cols=446  Identities=36%  Similarity=0.576  Sum_probs=419.9

Q ss_pred             ecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhc
Q 010735           42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG  121 (502)
Q Consensus        42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~  121 (502)
                      +||+||+++++++.++.+|+++++++|++|++  .|+.++.++|.++|++++++|++++++|++++++|+|||..+ ...
T Consensus         1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~-~~~   77 (453)
T cd07099           1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQR--AWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRAD-AGL   77 (453)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHH
Confidence            58999999999999999999999999999999  899999999999999999999999999999999999999995 567


Q ss_pred             cHHHHHHHHHHHHHhhhhhcCee-eec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCC
Q 010735          122 DIPGAANTLRYYAGAADKIHGEV-LKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ  197 (502)
Q Consensus       122 ev~~~~~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~  197 (502)
                      |+..+++.+++++..+.+..+.. .+.   ..+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.
T Consensus        78 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~  157 (453)
T cd07099          78 EVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEV  157 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCcc
Confidence            99999999999998876554321 221   13456788999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceE
Q 010735          198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL  277 (502)
Q Consensus       198 ~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~i  277 (502)
                      +|.++..++++|.++|+|+|+++++++++ +.+..|+.| .+|.|+||||+++|+.|.+.++ .+++|+++|+|||||+|
T Consensus       158 ~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~i  234 (453)
T cd07099         158 TPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAA-ERLIPVVLELGGKDPMI  234 (453)
T ss_pred             chHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHH-hcCCeEEEECCCCCeEE
Confidence            99999999999999999999999999965 678889887 5999999999999999999987 77999999999999999


Q ss_pred             EccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHH
Q 010735          278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY  357 (502)
Q Consensus       278 V~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~  357 (502)
                      |++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus       235 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~  314 (453)
T cd07099         235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRH  314 (453)
T ss_pred             ECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCH
Q 010735          358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL  437 (502)
Q Consensus       358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~  437 (502)
                      +++++++|+++++||.....+|.|++|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||++||||+|.
T Consensus       315 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~  394 (453)
T cd07099         315 VDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDL  394 (453)
T ss_pred             HHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCH
Confidence            99999999999999976533689999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          438 NVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       438 ~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      +.++++++++++|.|+||+...  ..+.+||||+|.||+|+++|.+|+++|++.|+++
T Consensus       395 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~  452 (453)
T cd07099         395 ARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA  452 (453)
T ss_pred             HHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence            9999999999999999999854  3578999999999999999999999999999985


No 84 
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=100.00  E-value=1.3e-92  Score=738.09  Aligned_cols=439  Identities=37%  Similarity=0.599  Sum_probs=414.3

Q ss_pred             CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHH
Q 010735           47 GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGA  126 (502)
Q Consensus        47 g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~  126 (502)
                      |+++++++.++.+|+++++++|++||+  .|+++|.++|.++|++++++|+++.++|++++++|+|||..++ ..|+..+
T Consensus         1 ~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~   77 (443)
T cd07152           1 GAVLGEVGVADAADVDRAAARAAAAQR--AWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKA-GFEVGAA   77 (443)
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHHHHHH
Confidence            688999999999999999999999999  8999999999999999999999999999999999999999865 5699999


Q ss_pred             HHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHH-HHH
Q 010735          127 ANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYF  205 (502)
Q Consensus       127 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~-~~l  205 (502)
                      ++.+++++.+.+...+...+...+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++ ..+
T Consensus        78 i~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l  157 (443)
T cd07152          78 IGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVI  157 (443)
T ss_pred             HHHHHHHHHhHHHhCCccccccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHH
Confidence            9999999987655444433333445568899999999999999999999999999999999999999999999996 789


Q ss_pred             HHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHH
Q 010735          206 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVN  285 (502)
Q Consensus       206 ~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~  285 (502)
                      .++|.++|+|+|++|++++ +.+.+..|+.|+++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++
T Consensus       158 ~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa-~~~~~~~lElGGk~~~iV~~dAdl~  235 (443)
T cd07152         158 ARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAG-RHLKKVSLELGGKNALIVLDDADLD  235 (443)
T ss_pred             HHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHH
Confidence            9999999999999999998 5568899999999999999999999999999887 7899999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC
Q 010735          286 TAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG  365 (502)
Q Consensus       286 ~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~G  365 (502)
                      .|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++.+||++++.+++++.+++++++.+|
T Consensus       236 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G  315 (443)
T cd07152         236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAG  315 (443)
T ss_pred             HHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHh
Q 010735          366 ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR  445 (502)
Q Consensus       366 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~  445 (502)
                      +++++||..   +|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++.++++
T Consensus       316 a~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~  392 (443)
T cd07152         316 ARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALAD  392 (443)
T ss_pred             CEEEeccCc---CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHH
Confidence            999999974   48999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcceeEEEEcCcCCCC-CCCCcCCCCCCCCC-CcchHHHHHhhhhccEEE
Q 010735          446 SIRAGIIWINCYFAFD-SDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       446 ~l~~g~v~iN~~~~~~-~~~pfgG~~~SG~g-~~~g~~~~~~~~~~k~v~  493 (502)
                      ++++|.|+||++.... +.+||||+|.||+| +++|++|+++|++.|+++
T Consensus       393 ~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~  442 (443)
T cd07152         393 RLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT  442 (443)
T ss_pred             hCCcCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence            9999999999976644 67999999999999 888999999999999875


No 85 
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=100.00  E-value=2.4e-92  Score=738.91  Aligned_cols=449  Identities=44%  Similarity=0.743  Sum_probs=426.5

Q ss_pred             eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (502)
Q Consensus        41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~  120 (502)
                      ++||+||+++++++.++.+|++++++.|++|++  .|+.+|.++|.++|+++++.|.++.++|++++++|+|||..++ .
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~   77 (451)
T cd07103           1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFK--TWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEA-R   77 (451)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-H
Confidence            479999999999999999999999999999999  8999999999999999999999999999999999999999975 5


Q ss_pred             ccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcH
Q 010735          121 GDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP  199 (502)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~  199 (502)
                      .|+..+++.+++++..+++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        78 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~  157 (451)
T cd07103          78 GEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETP  157 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCc
Confidence            6999999999999887766555443322 355678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEc
Q 010735          200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF  279 (502)
Q Consensus       200 ~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~  279 (502)
                      .++..+.++|.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+.+|+.|.+.++ ..++|+++|+|||||+||+
T Consensus       158 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~  236 (451)
T cd07103         158 LSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA-DTVKRVSLELGGNAPFIVF  236 (451)
T ss_pred             HHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCcEEEECCCCCeEEEC
Confidence            999999999999999999999999977678899999999999999999999999999987 7899999999999999999


Q ss_pred             cCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 010735          280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE  359 (502)
Q Consensus       280 ~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~  359 (502)
                      +|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++.+||++++.+++++.++++
T Consensus       237 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~  316 (451)
T cd07103         237 DDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVE  316 (451)
T ss_pred             CCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 010735          360 HGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV  439 (502)
Q Consensus       360 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  439 (502)
                      +++.+|+++++||.....+|+|++|||+.+++++++++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.
T Consensus       317 ~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~  396 (451)
T cd07103         317 DAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLAR  396 (451)
T ss_pred             HHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence            99999999999997654468999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          440 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       440 ~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      ++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus       397 ~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~  450 (451)
T cd07103         397 AWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS  450 (451)
T ss_pred             HHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence            999999999999999998877788999999999999999999999999999875


No 86 
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the  aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC  of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=100.00  E-value=2.5e-92  Score=739.21  Aligned_cols=450  Identities=48%  Similarity=0.826  Sum_probs=426.3

Q ss_pred             eecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh
Q 010735           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (502)
Q Consensus        41 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~  120 (502)
                      ++||+||+++++++.++.+|++++++.|++|++  .|+.++.++|.++|++++++|.+++++|++++++|+|||..++..
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~   78 (455)
T cd07093           1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFP--GWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLART   78 (455)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence            369999999999999999999999999999999  899999999999999999999999999999999999999987766


Q ss_pred             ccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHH
Q 010735          121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL  200 (502)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~  200 (502)
                      .|+..+++.++++++......+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus        79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~  158 (455)
T cd07093          79 RDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPL  158 (455)
T ss_pred             HHHHHHHHHHHHHHHhHHHhCCccccCCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcH
Confidence            79999999999998877654443333333556678899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEcc
Q 010735          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD  280 (502)
Q Consensus       201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~  280 (502)
                      ++..+.++|.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++
T Consensus       159 ~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~  237 (455)
T cd07093         159 TAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAA-PNLKPVSLELGGKNPNIVFA  237 (455)
T ss_pred             HHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHh-hcccceEeecCCCCceEECC
Confidence            99999999999999999999999977778899999999999999999999999999987 78999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 010735          281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH  360 (502)
Q Consensus       281 dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~  360 (502)
                      |||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++
T Consensus       238 dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~  317 (455)
T cd07093         238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVEL  317 (455)
T ss_pred             CCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCC
Q 010735          361 GKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD  436 (502)
Q Consensus       361 a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d  436 (502)
                      ++.+|+++++||....    ..|.|+.|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++|||+|
T Consensus       318 a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d  397 (455)
T cd07093         318 ARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRD  397 (455)
T ss_pred             HHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCC
Confidence            9999999999997643    258999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          437 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       437 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      .+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus       398 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~  454 (455)
T cd07093         398 LGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVC  454 (455)
T ss_pred             HHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence            999999999999999999998877788999999999999999999999999999885


No 87 
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=100.00  E-value=4e-92  Score=733.74  Aligned_cols=442  Identities=35%  Similarity=0.565  Sum_probs=413.8

Q ss_pred             EeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHh
Q 010735           40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK  119 (502)
Q Consensus        40 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~  119 (502)
                      +++||+||+++++++.++.+|+++++++|+++     |+.++.++|.++|++++++|++++++|++++++|+|||+.++ 
T Consensus         2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~-----~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-   75 (451)
T cd07146           2 EVRNPYTGEVVGTVPAGTEEALREALALAASY-----RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDT-   75 (451)
T ss_pred             CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH-----HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-
Confidence            57899999999999999999999999998753     778999999999999999999999999999999999999976 


Q ss_pred             hccHHHHHHHHHHHHHhhhhhcCeeeecc-----cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEec
Q 010735          120 MGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP  194 (502)
Q Consensus       120 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kp  194 (502)
                      ..|+..+++.+++++..+....++..+..     .+...+..++|+|||++|+|||||++.+++++++||++||+||+||
T Consensus        76 ~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKp  155 (451)
T cd07146          76 RYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKP  155 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence            56999999999999887765544332221     2334678899999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCC
Q 010735          195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS  274 (502)
Q Consensus       195 s~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~  274 (502)
                      |+.+|+++..+.++|.++|+|+|+++++++++.++++.|+.|+++|.|.||||+.+|+.|.+.++   .+|+++|+||||
T Consensus       156 s~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~---~~~~~lElGG~~  232 (451)
T cd07146         156 SEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG---YKRQLLELGGND  232 (451)
T ss_pred             CCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc---CCceeeecCCCc
Confidence            99999999999999999999999999999977778999999999999999999999999998764   689999999999


Q ss_pred             ceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHH
Q 010735          275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI  354 (502)
Q Consensus       275 ~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~  354 (502)
                      |+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++.+|||+++.+++++
T Consensus       233 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v  312 (451)
T cd07146         233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQI  312 (451)
T ss_pred             eEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEec
Q 010735          355 LSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMT  434 (502)
Q Consensus       355 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t  434 (502)
                      ++++++++.+|+++++||..   .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus       313 ~~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t  389 (451)
T cd07146         313 ENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCT  389 (451)
T ss_pred             HHHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence            99999999999999999964   589999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCC-CCcchHHHHHhhhhccEEE
Q 010735          435 KDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGF-GRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       435 ~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~-g~~~g~~~~~~~~~~k~v~  493 (502)
                      +|.++++++++++++|+|+||+.+.. .+.+||||+|.||+ |+++|++|+++|++.|+++
T Consensus       390 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~  450 (451)
T cd07146         390 NDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS  450 (451)
T ss_pred             CCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence            99999999999999999999987554 47799999999995 8999999999999999885


No 88 
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde  derived from cellular lipid peroxidation.
Probab=100.00  E-value=5.6e-92  Score=737.60  Aligned_cols=450  Identities=35%  Similarity=0.563  Sum_probs=418.0

Q ss_pred             ecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhc
Q 010735           42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG  121 (502)
Q Consensus        42 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~  121 (502)
                      +||+||+++++++.++.+|++++++.|++|++  .|+++|.++|.++|++++++|.+++++|++++++|+|||+.++...
T Consensus         1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~   78 (465)
T cd07098           1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQR--EWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLG   78 (465)
T ss_pred             CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence            59999999999999999999999999999999  8999999999999999999999999999999999999999987667


Q ss_pred             cHHHHHHHHHHHHHhhhhhcC-eeeecc---cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCC
Q 010735          122 DIPGAANTLRYYAGAADKIHG-EVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ  197 (502)
Q Consensus       122 ev~~~~~~l~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~  197 (502)
                      |+..+++.+++++..++.... ...+..   .....++.++|+|||++|+|||||+..++.++++||++||+||+|||+.
T Consensus        79 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~  158 (465)
T cd07098          79 EILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQ  158 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence            999999999999876654322 121211   1234578899999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHH----HHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCC
Q 010735          198 TPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK  273 (502)
Q Consensus       198 ~~~~~~~l~~~l----~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~  273 (502)
                      +|+++..+++++    .++|+|+|++|++++++ +.++.|+.|++|+.|.||||+.+|+.|.+.++ ..++|+++|+|||
T Consensus       159 ~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~-~~~~~~~lelgG~  236 (465)
T cd07098         159 VAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAA-ESLTPVVLELGGK  236 (465)
T ss_pred             CcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeEEEECCCC
Confidence            999998766554    68999999999999955 78999999999999999999999999999987 7899999999999


Q ss_pred             CceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHH
Q 010735          274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR  353 (502)
Q Consensus       274 ~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~  353 (502)
                      ||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++.+++|+|.++++++||++++.++++
T Consensus       237 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~  316 (465)
T cd07098         237 DPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDR  316 (465)
T ss_pred             CeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCce
Q 010735          354 ILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLA  429 (502)
Q Consensus       354 ~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~  429 (502)
                      +.+++++++.+|+++++||....    ..|+|+.|||+.+++++|+++++|+||||++|++|+|+|||++++|+++|||+
T Consensus       317 ~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLs  396 (465)
T cd07098         317 LEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLG  396 (465)
T ss_pred             HHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCce
Confidence            99999999999999999986532    25899999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735          430 AGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       430 ~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~  495 (502)
                      ++|||+|.+.++++++++++|.|+||++..  ..+.+||||+|.||+|+++|++++++|+++|+++++
T Consensus       397 a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~  464 (465)
T cd07098         397 ASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED  464 (465)
T ss_pred             EEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence            999999999999999999999999998753  347899999999999999999999999999999764


No 89 
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA)  to succinate.  SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731).  The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=100.00  E-value=5.7e-92  Score=729.25  Aligned_cols=427  Identities=38%  Similarity=0.590  Sum_probs=403.5

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhh
Q 010735           61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI  140 (502)
Q Consensus        61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~  140 (502)
                      ++++++.|++||+  .|+.++.++|.++|++++++|+++.++|++++++|+|||..++ ..|+..+++.+++++..+++.
T Consensus         1 v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~   77 (429)
T cd07100           1 IEAALDRAHAAFL--AWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEA-RAEVEKCAWICRYYAENAEAF   77 (429)
T ss_pred             CHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence            4789999999999  8999999999999999999999999999999999999999976 569999999999999887765


Q ss_pred             cC-eeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceE
Q 010735          141 HG-EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVL  219 (502)
Q Consensus       141 ~~-~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~  219 (502)
                      .. ...+. .+...+++++|+|||++|+|||||++.+++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++
T Consensus        78 ~~~~~~~~-~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv  156 (429)
T cd07100          78 LADEPIET-DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVF  156 (429)
T ss_pred             cCCeeccC-CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcE
Confidence            43 22332 23456789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccC
Q 010735          220 NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK  299 (502)
Q Consensus       220 ~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~  299 (502)
                      +++++++ +.+..|+.|++++.|.||||+++|+.|++.++ ..+||+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus       157 ~~v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~  234 (429)
T cd07100         157 QNLLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAG-KNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA  234 (429)
T ss_pred             EEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhcc
Confidence            9999955 46789999999999999999999999999987 789999999999999999999999999999999999999


Q ss_pred             CCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCC
Q 010735          300 GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG  379 (502)
Q Consensus       300 Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g  379 (502)
                      ||.|+++++||||+++||+|+++|+++++++++|+|+++++++||++++.+++++.+++++++++|+++++||......|
T Consensus       235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g  314 (429)
T cd07100         235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPG  314 (429)
T ss_pred             CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999997654458


Q ss_pred             ceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC
Q 010735          380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA  459 (502)
Q Consensus       380 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~  459 (502)
                      +|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|.|+||++..
T Consensus       315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~  394 (429)
T cd07100         315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVK  394 (429)
T ss_pred             eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          460 FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       460 ~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      ..+.+||||+|.||+|+++|++++++|++.|+++
T Consensus       395 ~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  428 (429)
T cd07100         395 SDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW  428 (429)
T ss_pred             CCCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence            7788999999999999999999999999999885


No 90 
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00  E-value=4.3e-91  Score=730.26  Aligned_cols=446  Identities=40%  Similarity=0.641  Sum_probs=419.4

Q ss_pred             EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Q 010735           39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA  118 (502)
Q Consensus        39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~  118 (502)
                      ++++||+||+++++++.++.++++++++.|++|++  .|+.++.++|.++|++++++|.++.++|++++++|+|||..++
T Consensus         1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a   78 (453)
T cd07149           1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAK--EMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDA   78 (453)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHH
Confidence            46789999999999999999999999999999999  8999999999999999999999999999999999999999976


Q ss_pred             hhccHHHHHHHHHHHHHhhhhhcCeeeecc-----cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEe
Q 010735          119 KMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK  193 (502)
Q Consensus       119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~k  193 (502)
                       ..|+..+++.+++++..++...+...+..     .+...+.+++|+|||++|+|||||+..+++++++||++||+||+|
T Consensus        79 -~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~K  157 (453)
T cd07149          79 -RKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLK  157 (453)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEE
Confidence             46999999999998887765544332221     123357889999999999999999999999999999999999999


Q ss_pred             cCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCC
Q 010735          194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK  273 (502)
Q Consensus       194 ps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~  273 (502)
                      ||+.+|.++..+.+++.++|+|+|+++++++++.+++..|+.|+++|.|.||||+.+|+.|++.++   .+|+++|+|||
T Consensus       158 ps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~---~~~~~lelGGk  234 (453)
T cd07149         158 PASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKKVTLELGSN  234 (453)
T ss_pred             CCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC---CCceeeecCCC
Confidence            999999999999999999999999999999976677899999999999999999999999999863   78999999999


Q ss_pred             CceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHH
Q 010735          274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR  353 (502)
Q Consensus       274 ~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~  353 (502)
                      ||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus       235 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~  314 (453)
T cd07149         235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAER  314 (453)
T ss_pred             ceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735          354 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM  433 (502)
Q Consensus       354 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~  433 (502)
                      +.+++++++.+|+++++||..   .|+|+.|||+.+++++++++++|+||||++|++|+|++|||+++|+++|||+++||
T Consensus       315 ~~~~i~~a~~~ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~  391 (453)
T cd07149         315 IEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVF  391 (453)
T ss_pred             HHHHHHHHHHCCCEEEeCCCC---CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEE
Confidence            999999999999999999865   47899999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          434 TKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       434 t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      |+|.++++++++++++|.|+||+.... .+.+||||+|.||+|+++|++|+++|++.|+++
T Consensus       392 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~  452 (453)
T cd07149         392 TNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC  452 (453)
T ss_pred             cCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence            999999999999999999999997654 467899999999999999999999999999885


No 91 
>PLN02203 aldehyde dehydrogenase
Probab=100.00  E-value=1.1e-89  Score=714.63  Aligned_cols=433  Identities=27%  Similarity=0.386  Sum_probs=401.4

Q ss_pred             CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHH
Q 010735           55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA  134 (502)
Q Consensus        55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~  134 (502)
                      .++.+|+++++++|++||+  .|+.++..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.+++++
T Consensus         2 ~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~   79 (484)
T PLN02203          2 EAPGETLEGSVAELRETYE--SGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLAL   79 (484)
T ss_pred             CCCHHHHHHHHHHHHHHHH--hcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3678999999999999999  89999999999999999999999999999999999999999765579999999999999


Q ss_pred             HhhhhhcCe---eeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH
Q 010735          135 GAADKIHGE---VLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK  210 (502)
Q Consensus       135 ~~~~~~~~~---~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~  210 (502)
                      +..++..+.   ..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~  159 (484)
T PLN02203         80 SNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIP  159 (484)
T ss_pred             HHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHH
Confidence            876655332   1111 123456899999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEcc---CCCHHHH
Q 010735          211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD---DVDVNTA  287 (502)
Q Consensus       211 ~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~---dadl~~a  287 (502)
                      ++ +|+|++|+++| +.+++..|+.|+ +|.|+||||+++|+.|++.++ ..++|+++|+|||||+||++   |||++.|
T Consensus       160 ~~-lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa-~~l~~v~lElGGknp~iV~~d~~daDl~~a  235 (484)
T PLN02203        160 KY-LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAA-KHLTPVALELGGKCPCIVDSLSSSRDTKVA  235 (484)
T ss_pred             Hh-CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHH-hcCCCEEEEecCCCeEEEccCCCCCCHHHH
Confidence            86 99999999998 677899999995 999999999999999999987 78999999999999999997   6999999


Q ss_pred             HHHHHHHHhc-cCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCC
Q 010735          288 ADMALLGILF-NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA  366 (502)
Q Consensus       288 a~~iv~~~~~-~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga  366 (502)
                      ++.+++++|. |+||.|++++|+|||++++|+|+++|.++++++++|+|.++ +++||++++.+++++.+++++++.+ +
T Consensus       236 a~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~  313 (484)
T PLN02203        236 VNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-A  313 (484)
T ss_pred             HHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-C
Confidence            9999999995 89999999999999999999999999999999999999885 6899999999999999999999887 7


Q ss_pred             EEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhh
Q 010735          367 TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS  446 (502)
Q Consensus       367 ~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~  446 (502)
                      ++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++++
T Consensus       314 ~~~~gg~~~-~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~  392 (484)
T PLN02203        314 SIVHGGSID-EKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSE  392 (484)
T ss_pred             eEEeCCCcC-CCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHh
Confidence            899998753 3699999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeEEEEcCcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735          447 IRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI  496 (502)
Q Consensus       447 l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~  496 (502)
                      +++|.|+||++..  ..+.+||||+|.||+|+++|++++++|++.|+|+.+.
T Consensus       393 l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~  444 (484)
T PLN02203        393 TSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRS  444 (484)
T ss_pred             CCcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcC
Confidence            9999999999754  3477999999999999999999999999999998764


No 92 
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=100.00  E-value=5.6e-90  Score=713.01  Aligned_cols=427  Identities=32%  Similarity=0.460  Sum_probs=396.7

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhh
Q 010735           60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK  139 (502)
Q Consensus        60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~  139 (502)
                      |++++++.|++||+  .|+.+|.++|.++|++++++|+++.++|++++++|+|||..++ ..|+..+++.+++++....+
T Consensus         1 ~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~~~~~~~   77 (431)
T cd07095           1 QVDAAVAAARAAFP--GWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEA-QTEVAAMAGKIDISIKAYHE   77 (431)
T ss_pred             CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999  8999999999999999999999999999999999999999976 56999999999998887765


Q ss_pred             hcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceE
Q 010735          140 IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVL  219 (502)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~  219 (502)
                      ..+.......+...++.++|+|||++|+|||||++.+++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~  157 (431)
T cd07095          78 RTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVL  157 (431)
T ss_pred             hcCCcccCCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHh
Confidence            54433222234567889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccC
Q 010735          220 NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK  299 (502)
Q Consensus       220 ~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~  299 (502)
                      +++++ +.+.++.|++|+++|.|.||||+++|+.|++.++....+++.+|+|||||+||++|||++.|++.+++++|.|+
T Consensus       158 ~~v~g-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~  236 (431)
T cd07095         158 NLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTA  236 (431)
T ss_pred             eEEeC-cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhC
Confidence            99998 45678999999999999999999999999998764557999999999999999999999999999999999999


Q ss_pred             CCCcCCCcEEEEecc-cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCC
Q 010735          300 GEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK  378 (502)
Q Consensus       300 Gq~C~s~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~  378 (502)
                      ||.|+++++||||++ ++|+|+++|+++++++++|+|.++++.+||+++..+++++.+++++++.+|+++++||...+.+
T Consensus       237 GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~  316 (431)
T cd07095         237 GQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAG  316 (431)
T ss_pred             CCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCC
Confidence            999999999999999 9999999999999999999999999999999999999999999999999999999999765557


Q ss_pred             CceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcC
Q 010735          379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF  458 (502)
Q Consensus       379 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~  458 (502)
                      |+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.|+||+..
T Consensus       317 g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~  395 (431)
T cd07095         317 TAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPT  395 (431)
T ss_pred             CeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCC
Confidence            999999999 6899999999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             C-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735          459 A-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV  492 (502)
Q Consensus       459 ~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v  492 (502)
                      . ..+.+||||+|.||+|+++|.+|+++|+ .|++
T Consensus       396 ~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~-~~~~  429 (431)
T cd07095         396 TGASSTAPFGGVGLSGNHRPSAYYAADYCA-YPVA  429 (431)
T ss_pred             CCCCCCCCCCCcccccCCCCChHHHHHHHh-hhhc
Confidence            5 3467899999999999999999999554 4544


No 93 
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=100.00  E-value=1e-89  Score=703.78  Aligned_cols=406  Identities=35%  Similarity=0.595  Sum_probs=383.1

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEc
Q 010735           89 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII  167 (502)
Q Consensus        89 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~  167 (502)
                      |++++++|++++++|++++++|+|||+.++ ..|+..+++.+++++.+++...+...+.. .+...+++++|+|||++|+
T Consensus         1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~   79 (409)
T PRK10090          1 LRKIAAGIRERASEISALIVEEGGKIQQLA-EVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL   79 (409)
T ss_pred             CHHHHHHHHHCHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEEC
Confidence            578999999999999999999999999976 46999999999999999877655433221 2345788999999999999


Q ss_pred             CCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCC
Q 010735          168 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS  247 (502)
Q Consensus       168 p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs  247 (502)
                      |||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++++.+.+..|+.|+++|+|.||||
T Consensus        80 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs  159 (409)
T PRK10090         80 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGS  159 (409)
T ss_pred             CCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECC
Confidence            99999999999999999999999999999999999999999999999999999999977778999999999999999999


Q ss_pred             cHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHH
Q 010735          248 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA  327 (502)
Q Consensus       248 ~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~  327 (502)
                      +.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus       160 ~~~g~~v~~~aa-~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~  238 (409)
T PRK10090        160 VSAGEKIMAAAA-KNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM  238 (409)
T ss_pred             HHHHHHHHHHHH-hcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence            999999999887 7899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCCCCC-CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceE
Q 010735          328 KAWVVGDPFDP-AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM  406 (502)
Q Consensus       328 ~~~~~g~~~~~-~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl  406 (502)
                      +++++|+|.++ ++++|||+++.+++++++++++++++|+++++||......|+|++|||+.+++++|++++||+||||+
T Consensus       239 ~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl  318 (409)
T PRK10090        239 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVL  318 (409)
T ss_pred             HhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceE
Confidence            99999999998 89999999999999999999999999999999997755468999999999999999999999999999


Q ss_pred             EEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhh
Q 010735          407 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY  486 (502)
Q Consensus       407 ~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~  486 (502)
                      +|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||++....+..||||+|.||+|+++|.+|+++|
T Consensus       319 ~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~gl~~f  398 (409)
T PRK10090        319 PVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEY  398 (409)
T ss_pred             EEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999877666789999999999999999999999


Q ss_pred             hhccEEEEec
Q 010735          487 LQVKSVVTPI  496 (502)
Q Consensus       487 ~~~k~v~~~~  496 (502)
                      ++.|++++++
T Consensus       399 ~~~k~v~~~~  408 (409)
T PRK10090        399 LQTQVVYLQS  408 (409)
T ss_pred             cceEEEEEec
Confidence            9999998764


No 94 
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00  E-value=3.5e-89  Score=759.26  Aligned_cols=462  Identities=32%  Similarity=0.484  Sum_probs=429.4

Q ss_pred             ceeEcCeEeeCCCCCeEEeecCCCCc-eEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735           23 KLFINGEFVDSVSGKTFETIDPRTGE-AIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (502)
Q Consensus        23 ~~~i~G~~~~~~~~~~~~v~~P~tg~-~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (502)
                      +.+|||      ++..++++||+|++ ++++++.++.+|+++|++.|++||+  .|+.+|.++|.++|++++++|+++++
T Consensus       554 ~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~--~W~~~~~~~Ra~iL~kaAdll~~~~~  625 (1038)
T PRK11904        554 GPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFP--AWSRTPVEERAAILERAADLLEANRA  625 (1038)
T ss_pred             cceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHH
Confidence            346777      35689999999988 9999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCe--eeecccccccceeecCCeEEEEEcCCChhHHhhhhh
Q 010735          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE--VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK  179 (502)
Q Consensus       102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~  179 (502)
                      +|+.++++|+|||+.++ ..|+..++++++||+..+++..+.  ..+...+..++..++|+|||++|+|||||+..++++
T Consensus       626 eL~~l~~~E~GK~~~~a-~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~  704 (1038)
T PRK11904        626 ELIALCVREAGKTLQDA-IAEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLGQ  704 (1038)
T ss_pred             HHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHHH
Confidence            99999999999999975 679999999999999988776543  233345667889999999999999999999999999


Q ss_pred             HHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735          180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA  259 (502)
Q Consensus       180 i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa  259 (502)
                      +++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.+++..|+.||+++.|.||||+.+++.|.+.++
T Consensus       705 i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A  784 (1038)
T PRK11904        705 VAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLA  784 (1038)
T ss_pred             HHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999988789999999999999999999999999999877


Q ss_pred             cC--CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735          260 TS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD  337 (502)
Q Consensus       260 ~~--~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~  337 (502)
                      ..  ..+|+++|+|||||+||++|||++.|++.+++|+|.++||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus       785 ~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d  864 (1038)
T PRK11904        785 ARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRL  864 (1038)
T ss_pred             hccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCccc
Confidence            33  2679999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEEEEeC--C
Q 010735          338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--T  413 (502)
Q Consensus       338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~  413 (502)
                      +++++||++++.+++++.++|+++.+ |+++++||..++  .+|+|+.|||+.  .+++.++++|+||||++|++|+  +
T Consensus       865 ~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~--~~~~~~~~eEiFGPVL~V~~~~~~~  941 (1038)
T PRK11904        865 LSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASD  941 (1038)
T ss_pred             ccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEc--cCCcHHhCCCCcCcEEEEEEeCCCC
Confidence            99999999999999999999999876 899999997653  259999999996  3577889999999999999998  6


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCC-CcchHHHHHhhhhcc
Q 010735          414 VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGLESLHNYLQVK  490 (502)
Q Consensus       414 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~k  490 (502)
                      ++|+|+++|+++|||+++|||+|.+.++++++++++|+||||+...  ..+.+||||+|.||+| +.+|++++++|++.|
T Consensus       942 ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~k 1021 (1038)
T PRK11904        942 LDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEK 1021 (1038)
T ss_pred             HHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceE
Confidence            9999999999999999999999999999999999999999999765  3356899999999999 688999999999999


Q ss_pred             EEEEec
Q 010735          491 SVVTPI  496 (502)
Q Consensus       491 ~v~~~~  496 (502)
                      +|+++.
T Consensus      1022 tv~~~~ 1027 (1038)
T PRK11904       1022 TVTVNT 1027 (1038)
T ss_pred             EEEEcc
Confidence            998875


No 95 
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=100.00  E-value=1.6e-89  Score=709.27  Aligned_cols=427  Identities=29%  Similarity=0.425  Sum_probs=397.0

Q ss_pred             CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHH
Q 010735           56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG  135 (502)
Q Consensus        56 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~  135 (502)
                      ++.+|+++++++|++|++  .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.+++++.
T Consensus         2 ~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~   79 (436)
T cd07135           2 TPLDEIDSIHSRLRATFR--SGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLK   79 (436)
T ss_pred             CCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHH
Confidence            578999999999999999  899999999999999999999999999999999999999997644699999999999998


Q ss_pred             hhhhhcCee-eecc----cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH
Q 010735          136 AADKIHGEV-LKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK  210 (502)
Q Consensus       136 ~~~~~~~~~-~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~  210 (502)
                      .+++..... ....    .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~  159 (436)
T cd07135          80 NLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP  159 (436)
T ss_pred             HHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHH
Confidence            776543221 1110    13456889999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHH
Q 010735          211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM  290 (502)
Q Consensus       211 ~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~  290 (502)
                      + |+|+|+++++++.+.+. ..|+.|+ +|.|.||||+.+|+.|++.++ ..++|+++|+|||||+||++|||++.|++.
T Consensus       160 ~-~lP~g~v~vv~g~~~~~-~~l~~~~-vd~v~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~~~iV~~dADl~~aa~~  235 (436)
T cd07135         160 K-YLDPDAFQVVQGGVPET-TALLEQK-FDKIFYTGSGRVGRIIAEAAA-KHLTPVTLELGGKSPVIVTKNADLELAAKR  235 (436)
T ss_pred             H-hCCcCEEEEEcCCchhH-HHHHhCC-CCEEEEECCcHHHHHHHHHHH-hcCCCeEEEccCCCcEEECCCCCHHHHHHH
Confidence            9 69999999999865554 5688999 999999999999999999877 789999999999999999999999999999


Q ss_pred             HHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEe
Q 010735          291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT  370 (502)
Q Consensus       291 iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~  370 (502)
                      +++++|.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++.+||++++.+++++.++++++   |+++++
T Consensus       236 i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~  311 (436)
T cd07135         236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVI  311 (436)
T ss_pred             HHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEE
Confidence            999999999999999999999999999999999999999999999 8999999999999999999999887   889999


Q ss_pred             CCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhccee
Q 010735          371 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG  450 (502)
Q Consensus       371 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g  450 (502)
                      ||.... +|+|++|||+.+++++++++++|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|
T Consensus       312 gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g  390 (436)
T cd07135         312 GGEMDE-ATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSG  390 (436)
T ss_pred             CCCcCC-CCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcC
Confidence            997653 6899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          451 IIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       451 ~v~iN~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      .|+||+...  ..+.+||||+|.||+|+++|.+|+++|++.|+|.
T Consensus       391 ~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~  435 (436)
T cd07135         391 GVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV  435 (436)
T ss_pred             eEEECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence            999998764  3578999999999999999999999999999873


No 96 
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=100.00  E-value=5.2e-89  Score=712.95  Aligned_cols=431  Identities=26%  Similarity=0.400  Sum_probs=397.9

Q ss_pred             CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHH
Q 010735           55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA  134 (502)
Q Consensus        55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~  134 (502)
                      ..+.+|++++++.|+++|+  .|+.++.++|.++|++++++|++|+++|++++++|+|||..++...|+..+++.+++++
T Consensus         3 ~~~~~~i~~av~~a~~a~~--~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~   80 (493)
T PTZ00381          3 PDNPEIIPPIVKKLKESFL--TGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLL   80 (493)
T ss_pred             CCCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            4688999999999999999  89999999999999999999999999999999999999999876679999999999988


Q ss_pred             HhhhhhcCe-eeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH
Q 010735          135 GAADKIHGE-VLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK  210 (502)
Q Consensus       135 ~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~  210 (502)
                      +..++.... ....   ......+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~  160 (493)
T PTZ00381         81 KHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLT  160 (493)
T ss_pred             HHHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHH
Confidence            766543221 1111   122357889999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHH
Q 010735          211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM  290 (502)
Q Consensus       211 ~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~  290 (502)
                      ++ +|+|++++++| +.+.+..|+.|+ +|.|+||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.
T Consensus       161 ~~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa-~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~  236 (493)
T PTZ00381        161 KY-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAA-ENLTPCTLELGGKSPVIVDKSCNLKVAARR  236 (493)
T ss_pred             Hh-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHH-hcCCcEEEEcCCCCceEEcCCCCHHHHHHH
Confidence            96 99999999998 667888899887 999999999999999999987 789999999999999999999999999999


Q ss_pred             HHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEe
Q 010735          291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT  370 (502)
Q Consensus       291 iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~  370 (502)
                      +++++|.|+||.|+++++||||++++|+|+++|++.+++++ |++.++++++||+++..+++++.++++   .+|+++++
T Consensus       237 i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~  312 (493)
T PTZ00381        237 IAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVY  312 (493)
T ss_pred             HHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEE
Confidence            99999999999999999999999999999999999999986 666678899999999999999999996   36899999


Q ss_pred             CCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhccee
Q 010735          371 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG  450 (502)
Q Consensus       371 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g  450 (502)
                      ||..+ ..+.|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|
T Consensus       313 gG~~~-~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG  391 (493)
T PTZ00381        313 GGEVD-IENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSG  391 (493)
T ss_pred             CCCcC-CCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcc
Confidence            99764 36889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735          451 IIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI  496 (502)
Q Consensus       451 ~v~iN~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~  496 (502)
                      .|+||++..  ..+.+||||+|.||+|+++|.+|+++|++.|+|..+.
T Consensus       392 ~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~  439 (493)
T PTZ00381        392 AVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKS  439 (493)
T ss_pred             eEEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEcc
Confidence            999998754  4578999999999999999999999999999998764


No 97 
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate.  The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=100.00  E-value=8.3e-89  Score=707.24  Aligned_cols=441  Identities=22%  Similarity=0.303  Sum_probs=399.0

Q ss_pred             eeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCC--CCCCHHHH----HHHHHHHHHHHH
Q 010735           24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW--PRFSGAER----RGIMLKFADLIE   97 (502)
Q Consensus        24 ~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w--~~~~~~~R----~~~L~~~a~~l~   97 (502)
                      +||||+|+.+  +++++++||+||+++++++.++.+|+++++++|++||+  .|  +.++..+|    .++|+++++.|+
T Consensus         1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~~~R~l~~~~il~~~a~~l~   76 (489)
T cd07126           1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPK--SGLHNPLKNPERYLLYGDVSHRVAHELR   76 (489)
T ss_pred             CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hccccCCCHHHHhhhHHHHHHHHHHHHH
Confidence            4799999874  57899999999999999999999999999999999999  77  56779999    899999999999


Q ss_pred             Hh--HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeee--ec-ccccccceeecCCeEEEEEcCCChh
Q 010735           98 EH--AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL--KM-SRALQGYTLREPIGVVGHIIPWNFP  172 (502)
Q Consensus        98 ~~--~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~P~Gvv~~i~p~n~P  172 (502)
                      ++  .++|++++++|+|||+.++ ..|+..+++.+++++...++..+...  +. ..+...+++++|+|||++|+|||||
T Consensus        77 ~~~~~~~la~~~~~e~GK~~~~a-~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP  155 (489)
T cd07126          77 KPEVEDFFARLIQRVAPKSDAQA-LGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFP  155 (489)
T ss_pred             cCCCHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchH
Confidence            98  5999999999999999975 57999999999999988766544432  21 1244568999999999999999999


Q ss_pred             HHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHH
Q 010735          173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR  252 (502)
Q Consensus       173 ~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~  252 (502)
                      +...++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+++|.+.+ +..++.|+++|+|+||||+++|+
T Consensus       156 ~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr  234 (489)
T cd07126         156 LEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAE  234 (489)
T ss_pred             HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHH
Confidence            99999999999999999999999999999999999999999999999999996554 55688899999999999999999


Q ss_pred             HHHHHHhcCCCCceEEecCCCCceEEccCC-CHHHHHHHHHHHHhccCCCCcCCCcEEEEeccc-HHHHHHHHHHHHhcc
Q 010735          253 QVMQAAATSNLKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAW  330 (502)
Q Consensus       253 ~i~~~aa~~~~~~~~~e~gG~~~~iV~~da-dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i-~~~f~~~l~~~~~~~  330 (502)
                      .|...++    +++.+|+||+||+||++|| |++.|++.+++++|.|+||.|++++|||||+++ +|+|+++|++.++++
T Consensus       235 ~i~~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~  310 (489)
T cd07126         235 RLALELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQR  310 (489)
T ss_pred             HHHHHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhc
Confidence            9988764    5799999999999999999 999999999999999999999999999999995 689999999999999


Q ss_pred             ccCCCCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCC----CC-ceEecEEEee------CCCCCcccc
Q 010735          331 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGK----KG-YYIEPTIFTN------VTEDMLIAK  398 (502)
Q Consensus       331 ~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~----~g-~~~~Ptvl~~------~~~~~~~~~  398 (502)
                      ++|+     +++||+++.. .+++.++++++++ +|+++++||..+..    .+ .|++|||+..      ++++|++++
T Consensus       311 ~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~  384 (489)
T cd07126         311 KLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVT  384 (489)
T ss_pred             ccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHh
Confidence            8874     5789999998 9999999999998 99999999976432    23 3899999942      567999999


Q ss_pred             cceeeceEEEEEeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeE--EEEcCcCCCCCC----CCcCCCC
Q 010735          399 NEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI--IWINCYFAFDSD----CPYGGYK  470 (502)
Q Consensus       399 ~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~--v~iN~~~~~~~~----~pfgG~~  470 (502)
                      ||+||||++|++|+|  ++|||+++|+++|||++||||+|.++++++++++++|+  |+||+.+...+.    .||||+|
T Consensus       385 eEiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k  464 (489)
T cd07126         385 TEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPR  464 (489)
T ss_pred             CCCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCc
Confidence            999999999999999  99999999999999999999999999999999999999  669987765444    9999999


Q ss_pred             CCCCCCcchH
Q 010735          471 MSGFGRDCGL  480 (502)
Q Consensus       471 ~SG~g~~~g~  480 (502)
                      .||+|+++..
T Consensus       465 ~sg~g~~~~~  474 (489)
T cd07126         465 GAGIGTPEAI  474 (489)
T ss_pred             ccCCCCHhHH
Confidence            9999998754


No 98 
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28)  involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=100.00  E-value=6.7e-89  Score=709.31  Aligned_cols=427  Identities=40%  Similarity=0.655  Sum_probs=403.1

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhh
Q 010735           60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK  139 (502)
Q Consensus        60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~  139 (502)
                      |++++++.|++|++  .|+.++.++|.++|++++++|+++.++|++++++|+|||..++ ..|+..+++.+++++.+..+
T Consensus         1 ~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~-~~ei~~~~~~l~~~~~~~~~   77 (431)
T cd07104           1 DVDRAYAAAAAAQK--AWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKA-AFEVGAAIAILREAAGLPRR   77 (431)
T ss_pred             CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999  8999999999999999999999999999999999999999965 56999999999999887765


Q ss_pred             hcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHH-HHHHHHHHHHcCCCCc
Q 010735          140 IHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI-ALYFAHLAKLAGVPDG  217 (502)
Q Consensus       140 ~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~-~~~l~~~l~~aGlP~g  217 (502)
                      ..+...+.. .+...+.+++|+|||++|+|||||++.+++++++||++||+||+|||+.+|.+ +..+.+++.++|+|+|
T Consensus        78 ~~~~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~g  157 (431)
T cd07104          78 PEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKG  157 (431)
T ss_pred             hcCccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcc
Confidence            544433332 34567889999999999999999999999999999999999999999999998 5789999999999999


Q ss_pred             eEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhc
Q 010735          218 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF  297 (502)
Q Consensus       218 ~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~  297 (502)
                      +++++++++.+++..|+.|+++|.|.||||+.+|+.|+++++ .+++|+++|+|||||+||++|||++.|++.+++++|.
T Consensus       158 vv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~  236 (431)
T cd07104         158 VLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAG-RHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL  236 (431)
T ss_pred             cEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh-hcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHh
Confidence            999999977778999999999999999999999999999987 7899999999999999999999999999999999999


Q ss_pred             cCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC
Q 010735          298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK  377 (502)
Q Consensus       298 ~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~  377 (502)
                      |+||.|+++++||||++++|+|+++|+++++.+++|+|.++++.+||++++.+++++.+++++++.+|+++++||..   
T Consensus       237 ~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~---  313 (431)
T cd07104         237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY---  313 (431)
T ss_pred             cCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999964   


Q ss_pred             CCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCc
Q 010735          378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY  457 (502)
Q Consensus       378 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~  457 (502)
                      +|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|.|+||++
T Consensus       314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~  393 (431)
T cd07104         314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQ  393 (431)
T ss_pred             CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCC-CCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          458 FAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       458 ~~~~-~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      +... +.+||||+|.||+|+++|++|+++|++.|+++
T Consensus       394 ~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~  430 (431)
T cd07104         394 TVNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT  430 (431)
T ss_pred             CCCCCCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence            7654 78999999999999999999999999999985


No 99 
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=100.00  E-value=7.4e-89  Score=707.05  Aligned_cols=425  Identities=37%  Similarity=0.585  Sum_probs=397.4

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhh
Q 010735           60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK  139 (502)
Q Consensus        60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~  139 (502)
                      |++++++.|++||+  .|+.++.++|.++|++++++|+++.++|++++++|+|||..++ ..|+..+++.+++++...+.
T Consensus         1 ~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~-~~ei~~~~~~l~~~~~~~~~   77 (432)
T cd07105           1 DADQAVEAAAAAFP--AWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWA-GFNVDLAAGMLREAASLITQ   77 (432)
T ss_pred             CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999  8999999999999999999999999999999999999998755 56999999999999988765


Q ss_pred             hcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCce
Q 010735          140 IHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV  218 (502)
Q Consensus       140 ~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~  218 (502)
                      ..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv  157 (432)
T cd07105          78 IIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGV  157 (432)
T ss_pred             hcCeecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCc
Confidence            433333322 3345678999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCC---chhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHH
Q 010735          219 LNVVPGF---GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI  295 (502)
Q Consensus       219 ~~~v~g~---~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~  295 (502)
                      +|+++++   +.+++..|+.||++|.|.||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++
T Consensus       158 ~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa-~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~  236 (432)
T cd07105         158 LNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAA-KHLKPVLLELGGKAPAIVLEDADLDAAANAALFGA  236 (432)
T ss_pred             EEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH-hcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence            9999974   3457899999999999999999999999999987 78999999999999999999999999999999999


Q ss_pred             hccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc
Q 010735          296 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI  375 (502)
Q Consensus       296 ~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~  375 (502)
                      |.|+||.|+++++||||+++||+|+++|+++++++++|     ++++||++++.+++++.+++++++.+|+++++||...
T Consensus       237 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~  311 (432)
T cd07105         237 FLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLAD  311 (432)
T ss_pred             HhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence            99999999999999999999999999999999999988     5789999999999999999999999999999999765


Q ss_pred             C-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEE
Q 010735          376 G-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWI  454 (502)
Q Consensus       376 ~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~i  454 (502)
                      . ..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+|
T Consensus       312 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~v  391 (432)
T cd07105         312 ESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHI  391 (432)
T ss_pred             CCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEE
Confidence            3 368999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCcCCC-CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          455 NCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       455 N~~~~~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      |++... .+.+||||+|.||+|+++|++|+++|++.|+|+
T Consensus       392 N~~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~  431 (432)
T cd07105         392 NGMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWIT  431 (432)
T ss_pred             CCCCCCCCCCCCCCCcccccccccChHHHHHHhhceEEEe
Confidence            998654 478999999999999999999999999999986


No 100
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616)  most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=100.00  E-value=1.3e-88  Score=702.16  Aligned_cols=420  Identities=30%  Similarity=0.449  Sum_probs=390.1

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcC
Q 010735           63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG  142 (502)
Q Consensus        63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~  142 (502)
                      +.+++|++||+  .|+.+|..+|.++|++++++|+++.++|++++++|+|||+.++...|+..+++.+++++..++...+
T Consensus         2 ~~v~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~   79 (449)
T cd07136           2 SLVEKQRAFFK--TGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMK   79 (449)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            56899999999  8999999999999999999999999999999999999999977556999999999999987766543


Q ss_pred             e-eeecc---cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCce
Q 010735          143 E-VLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV  218 (502)
Q Consensus       143 ~-~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~  218 (502)
                      . ..+..   .+...++.++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+++++.++ +|+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv  158 (449)
T cd07136          80 PKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEY  158 (449)
T ss_pred             CCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCE
Confidence            2 22111   2345688999999999999999999999999999999999999999999999999999999998 99999


Q ss_pred             EEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhcc
Q 010735          219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN  298 (502)
Q Consensus       219 ~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~  298 (502)
                      +|++++ +.+.+..|+.|+ +|.|.||||+++|+.|++.++ ..++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus       159 ~~~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa-~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~  235 (449)
T cd07136         159 VAVVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAA-KHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLN  235 (449)
T ss_pred             EEEEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHH-hcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcc
Confidence            999998 556788888775 999999999999999999987 77899999999999999999999999999999999999


Q ss_pred             CCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCC
Q 010735          299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK  378 (502)
Q Consensus       299 ~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~  378 (502)
                      +||.|++++|||||++++|+|+++|++++++++.|+|.+ ++++||++++.+++++.++++++     ++++||.... +
T Consensus       236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~~-~  308 (449)
T cd07136         236 AGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTDR-E  308 (449)
T ss_pred             cCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcCC-C
Confidence            999999999999999999999999999999999999987 88999999999999999999763     8999997643 6


Q ss_pred             CceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcC
Q 010735          379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF  458 (502)
Q Consensus       379 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~  458 (502)
                      |+|+.|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.|+||+..
T Consensus       309 g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~  388 (449)
T cd07136         309 TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTI  388 (449)
T ss_pred             CCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             C--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735          459 A--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       459 ~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~  495 (502)
                      .  ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus       389 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~  427 (449)
T cd07136         389 MHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKK  427 (449)
T ss_pred             ccccCCCCCccCcCcccCCcccCHHHHHHhccceEEEEc
Confidence            4  347899999999999999999999999999999877


No 101
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD.  In Arabidopsis thaliana, stress-regulated expression of ALDH3I1  was observed in  leaves and osmotic stress expression of  ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=100.00  E-value=2.2e-88  Score=699.98  Aligned_cols=423  Identities=27%  Similarity=0.402  Sum_probs=391.1

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcC
Q 010735           63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG  142 (502)
Q Consensus        63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~  142 (502)
                      ++++.|++||+  .|+.++..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.+++++....+..+
T Consensus         3 ~a~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~   80 (432)
T cd07137           3 RLVRELRETFR--SGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMA   80 (432)
T ss_pred             HHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            48899999999  8999999999999999999999999999999999999999876556999999999999887755333


Q ss_pred             e-e--eec-ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCce
Q 010735          143 E-V--LKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV  218 (502)
Q Consensus       143 ~-~--~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~  218 (502)
                      . .  .+. ......++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++ +|+|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gv  159 (432)
T cd07137          81 PEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKA  159 (432)
T ss_pred             CcccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCe
Confidence            2 1  111 11234578999999999999999999999999999999999999999999999999999999995 99999


Q ss_pred             EEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHh-c
Q 010735          219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL-F  297 (502)
Q Consensus       219 ~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~-~  297 (502)
                      +|+++| +.+.+..|+.| ++|.|.||||+.+|+.|++.++ ..++|+++|+|||||+||++|||++.|++.+++++| +
T Consensus       160 v~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa-~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~  236 (432)
T cd07137         160 IKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAA-KHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC  236 (432)
T ss_pred             EEEEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHH-hcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhc
Confidence            999999 55678889887 6999999999999999999987 789999999999999999999999999999999999 5


Q ss_pred             cCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC
Q 010735          298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK  377 (502)
Q Consensus       298 ~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~  377 (502)
                      |+||.|++++|||||++++|+|+++|++++++++.|+| ++++++||++++.+++++.++++++.. |+++++||... .
T Consensus       237 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~-~  313 (432)
T cd07137         237 NNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERD-E  313 (432)
T ss_pred             cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcC-C
Confidence            99999999999999999999999999999999999999 468899999999999999999999998 89999999763 3


Q ss_pred             CCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCc
Q 010735          378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY  457 (502)
Q Consensus       378 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~  457 (502)
                      +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.|+||++
T Consensus       314 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~  393 (432)
T cd07137         314 KNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDT  393 (432)
T ss_pred             CCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCc
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735          458 FA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT  494 (502)
Q Consensus       458 ~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~  494 (502)
                      ..  ..+.+||||+|.||+|+++|.+++++|++.|++++
T Consensus       394 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~  432 (432)
T cd07137         394 VVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVLY  432 (432)
T ss_pred             cccccCCCCCCCCcCcCcCCccccHHHHHHhccCceeeC
Confidence            65  34789999999999999999999999999999853


No 102
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=100.00  E-value=1.5e-87  Score=695.60  Aligned_cols=423  Identities=30%  Similarity=0.426  Sum_probs=389.6

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC-HHHHhhccHHHHHHHHHHHHHhhhhhc
Q 010735           63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL-HSWAKMGDIPGAANTLRYYAGAADKIH  141 (502)
Q Consensus        63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~-~~~~~~~ev~~~~~~l~~~~~~~~~~~  141 (502)
                      ..+++|++||+  .|+.++..+|.++|++++++|++++++|++++++|+||+ ..++...|+..+++.+++++..+.+..
T Consensus         2 ~~~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~   79 (434)
T cd07133           2 ALLERQKAAFL--ANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWM   79 (434)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            35788999999  899999999999999999999999999999999999985 566556799999999999998776543


Q ss_pred             Ceee-ec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCc
Q 010735          142 GEVL-KM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG  217 (502)
Q Consensus       142 ~~~~-~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g  217 (502)
                      +... ..   ..+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..++++|.++ +|+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g  158 (434)
T cd07133          80 KPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDED  158 (434)
T ss_pred             CCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcC
Confidence            3221 11   12335688999999999999999999999999999999999999999999999999999999997 9999


Q ss_pred             eEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhc
Q 010735          218 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF  297 (502)
Q Consensus       218 ~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~  297 (502)
                      +++++++ +.+.++.|+.|+ +|.|+||||+.+|+.|++.++ ..++|+++|+|||||+||++|||++.|++.+++++|+
T Consensus       159 ~~~~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa-~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~  235 (434)
T cd07133         159 EVAVVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAA-ENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLL  235 (434)
T ss_pred             eEEEEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHH-hcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhc
Confidence            9999998 456788888776 999999999999999999987 7889999999999999999999999999999999999


Q ss_pred             cCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-
Q 010735          298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-  376 (502)
Q Consensus       298 ~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-  376 (502)
                      |+||.|+++++||||++++|+|+++|+++++++++|+  ++++++||++++.+++++.+++++++.+|+++++||.... 
T Consensus       236 ~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~  313 (434)
T cd07133         236 NAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGED  313 (434)
T ss_pred             cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcC
Confidence            9999999999999999999999999999999999886  4678999999999999999999999999999999987643 


Q ss_pred             -CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEc
Q 010735          377 -KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN  455 (502)
Q Consensus       377 -~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN  455 (502)
                       .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||
T Consensus       314 ~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN  393 (434)
T cd07133         314 FAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTIN  393 (434)
T ss_pred             CCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence             3689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          456 CYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       456 ~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      ++..  ..+.+||||+|.||+|+++|.+|+++|++.|+|+
T Consensus       394 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~  433 (434)
T cd07133         394 DTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF  433 (434)
T ss_pred             CcccccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence            8764  4478999999999999999999999999999874


No 103
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=100.00  E-value=8.5e-87  Score=689.67  Aligned_cols=424  Identities=28%  Similarity=0.409  Sum_probs=394.1

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcC
Q 010735           63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG  142 (502)
Q Consensus        63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~  142 (502)
                      +++++|++||+  .|+.+|..+|.++|++++++|+++.++|++++++|+|||+.++...|+..+++.+++++.......+
T Consensus         2 ~~~~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~   79 (433)
T cd07134           2 RVFAAQQAHAL--ALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMK   79 (433)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            57889999999  8999999999999999999999999999999999999999976557999999999998876544322


Q ss_pred             e-eeecc---cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCce
Q 010735          143 E-VLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV  218 (502)
Q Consensus       143 ~-~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~  218 (502)
                      . ..+..   .+...++.++|+|||++|+|||||++.+++++++||++||+||+|||+.+|.++..+++++.++ +|+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~  158 (433)
T cd07134          80 PKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDE  158 (433)
T ss_pred             CcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCE
Confidence            1 12111   2445689999999999999999999999999999999999999999999999999999999999 99999


Q ss_pred             EEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhcc
Q 010735          219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN  298 (502)
Q Consensus       219 ~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~  298 (502)
                      ++++++ +.+.+..|+.|+ ++.|.||||+.+|+.|++.++ ..++|+++|+|||||+||++|||++.|++.+++++|.+
T Consensus       159 v~~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~  235 (433)
T cd07134         159 VAVFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAA-KHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN  235 (433)
T ss_pred             EEEEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHH-hcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcC
Confidence            999999 456888999998 999999999999999999987 67899999999999999999999999999999999999


Q ss_pred             CCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC
Q 010735          299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK  377 (502)
Q Consensus       299 ~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~  377 (502)
                      +||.|+++++||||++++|+|+++|+++++.++.|+| .++++++||++++.+++++.+++++++++|+++++||..+. 
T Consensus       236 ~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~-  314 (433)
T cd07134         236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDA-  314 (433)
T ss_pred             cCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCC-
Confidence            9999999999999999999999999999999988887 88899999999999999999999999999999999997643 


Q ss_pred             CCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCc
Q 010735          378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY  457 (502)
Q Consensus       378 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~  457 (502)
                      .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||++
T Consensus       315 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~  394 (433)
T cd07134         315 AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDV  394 (433)
T ss_pred             CCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCc
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             CC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          458 FA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       458 ~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      +.  ..+.+||||+|+||+|+++|++++++|++.|++.
T Consensus       395 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~  432 (433)
T cd07134         395 VLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL  432 (433)
T ss_pred             ccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence            64  3478999999999999999999999999999874


No 104
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00  E-value=3.2e-86  Score=740.87  Aligned_cols=447  Identities=29%  Similarity=0.463  Sum_probs=415.2

Q ss_pred             eEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 010735           25 FINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL  103 (502)
Q Consensus        25 ~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  103 (502)
                      +|+|+..   ++..++++||+| +++++++..++.+|+++|++.|++|++  .|+.+|..+|+++|++++++|+++.++|
T Consensus       650 ~~~~~~~---~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~--~W~~~p~~eRa~iL~r~Adlle~~~~eL  724 (1318)
T PRK11809        650 MLEDPVA---AGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAP--IWFATPPAERAAILERAADLMEAQMQTL  724 (1318)
T ss_pred             cccCcCC---CCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHH
Confidence            5577322   467899999999 789999999999999999999999999  8999999999999999999999999999


Q ss_pred             HHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHH
Q 010735          104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA  183 (502)
Q Consensus       104 ~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A  183 (502)
                      +.++++|+|||+.++ ..|+..++++++||+..++...           ....++|+|||++|+|||||+.++++++++|
T Consensus       725 ~~l~~~EaGKt~~~A-~~EV~eaidflryyA~~a~~~~-----------~~~~~~PlGVV~~IsPWNFPlai~~g~iaaA  792 (1318)
T PRK11809        725 MGLLVREAGKTFSNA-IAEVREAVDFLRYYAGQVRDDF-----------DNDTHRPLGPVVCISPWNFPLAIFTGQVAAA  792 (1318)
T ss_pred             HHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhc-----------CCceeecccEEEEECCCccHHHHHHHHHHHH
Confidence            999999999999965 6799999999999998765421           1246899999999999999999999999999


Q ss_pred             HHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCC
Q 010735          184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL  263 (502)
Q Consensus       184 LaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~  263 (502)
                      |++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+++..|+.||+|+.|.||||+++|+.|.+.++ ..+
T Consensus       793 LaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA-~~l  871 (1318)
T PRK11809        793 LAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLA-GRL  871 (1318)
T ss_pred             HHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHh-hhc
Confidence            9999999999999999999999999999999999999999988888999999999999999999999999999877 333


Q ss_pred             ------CceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735          264 ------KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD  337 (502)
Q Consensus       264 ------~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~  337 (502)
                            +|+++|+||+|++||++|||+|.|++.+++++|.++||.|+++++||||++++|+|+++|++.++.+++|+|.+
T Consensus       872 ~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~  951 (1318)
T PRK11809        872 DPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDR  951 (1318)
T ss_pred             ccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCccc
Confidence                  79999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccceeeceEEEEEeC--
Q 010735          338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--  412 (502)
Q Consensus       338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--  412 (502)
                      .++++||+|++.+++++.++|++++.+|++++.|+....   ..|+|+.|||+..  +++.++++|+||||++|++|+  
T Consensus       952 ~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~ 1029 (1318)
T PRK11809        952 LSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRN 1029 (1318)
T ss_pred             ccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCC
Confidence            999999999999999999999999999999998875432   3599999999973  567889999999999999996  


Q ss_pred             CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC--CCCCCcCCCCCCCCC-CcchHHHHHhhhhc
Q 010735          413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFG-RDCGLESLHNYLQV  489 (502)
Q Consensus       413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~  489 (502)
                      +++|+|+++|+++|||+++|||+|.+.++++++++++|+||||+....  .+.+||||+|.||+| +.+|++++.+|++.
T Consensus      1030 ~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~ 1109 (1318)
T PRK11809       1030 QLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLAT 1109 (1318)
T ss_pred             CHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhcc
Confidence            799999999999999999999999999999999999999999986542  356799999999999 58999999999998


Q ss_pred             cE
Q 010735          490 KS  491 (502)
Q Consensus       490 k~  491 (502)
                      +.
T Consensus      1110 ~~ 1111 (1318)
T PRK11809       1110 RP 1111 (1318)
T ss_pred             CC
Confidence            74


No 105
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1  (ALDH3A1, ALDH3B1,  EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=100.00  E-value=3.8e-86  Score=686.15  Aligned_cols=422  Identities=27%  Similarity=0.396  Sum_probs=387.2

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcC
Q 010735           63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG  142 (502)
Q Consensus        63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~  142 (502)
                      +++++|++||+  .|+.+|..+|.++|++++++|+++.++|++++++|+|||+.++...|+..+++.++++++.++....
T Consensus         2 ~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~   79 (443)
T cd07132           2 EAVRRAREAFS--SGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMK   79 (443)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            57899999999  8999999999999999999999999999999999999999987667999999999999887765433


Q ss_pred             eeee-c---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCce
Q 010735          143 EVLK-M---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV  218 (502)
Q Consensus       143 ~~~~-~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~  218 (502)
                      .... .   ......++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv  158 (443)
T cd07132          80 PEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKEC  158 (443)
T ss_pred             CccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCe
Confidence            2111 0   12245788999999999999999999999999999999999999999999999999999999986 99999


Q ss_pred             EEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhcc
Q 010735          219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN  298 (502)
Q Consensus       219 ~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~  298 (502)
                      ++++++++. ....|+. +++|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus       159 ~~vv~g~~~-~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~-~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~  235 (443)
T cd07132         159 YPVVLGGVE-ETTELLK-QRFDYIFYTGSTSVGKIVMQAAA-KHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFIN  235 (443)
T ss_pred             EEEEeCCHH-HHHHHHh-CCCCEEEEECChHHHHHHHHHHH-hhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhc
Confidence            999999544 4566765 58999999999999999999877 78999999999999999999999999999999999999


Q ss_pred             CCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCC
Q 010735          299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK  378 (502)
Q Consensus       299 ~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~  378 (502)
                      +||.|++++|||||++++|+|+++|++++++++.|+| ++++++||++++.+++++.+++++     +++++||..+. .
T Consensus       236 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~~-~  308 (443)
T cd07132         236 AGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTDE-K  308 (443)
T ss_pred             CCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccCC-C
Confidence            9999999999999999999999999999999998888 688999999999999999999863     48999997643 6


Q ss_pred             CceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcC
Q 010735          379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF  458 (502)
Q Consensus       379 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~  458 (502)
                      |+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||++.
T Consensus       309 ~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~  388 (443)
T cd07132         309 ERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTI  388 (443)
T ss_pred             CCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             CC--CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecC
Q 010735          459 AF--DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF  497 (502)
Q Consensus       459 ~~--~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~  497 (502)
                      ..  .+.+||||+|.||+|+++|.+|+++|++.|++++++.
T Consensus       389 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~~  429 (443)
T cd07132         389 MHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKSL  429 (443)
T ss_pred             cccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEccc
Confidence            43  3779999999999999999999999999999987753


No 106
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00  E-value=8.1e-86  Score=739.99  Aligned_cols=454  Identities=31%  Similarity=0.488  Sum_probs=420.8

Q ss_pred             ceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735           23 KLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (502)
Q Consensus        23 ~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (502)
                      +.+|+|+...   +..++++||+| ++++++++.++.++++++++.|++|++  .|+.+|.++|.++|++++++|+++++
T Consensus       556 ~~~i~g~~~~---~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~--~W~~~~~~~Ra~iL~raAdll~~~~~  630 (1208)
T PRK11905        556 APLLAGGDVD---GGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFP--EWSATPAAERAAILERAADLMEAHMP  630 (1208)
T ss_pred             cceecccccc---CCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence            3466776552   56799999999 999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (502)
Q Consensus       102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~  181 (502)
                      +|++++++|+||++.++ ..|+..++++++||+..++...+           ...++|+|||++|+|||||+...+++++
T Consensus       631 eL~~l~~~E~GKt~~ea-~~Ev~eaid~lr~ya~~a~~~~~-----------~~~~~P~GVv~~IsPwNfPlai~~g~i~  698 (1208)
T PRK11905        631 ELFALAVREAGKTLANA-IAEVREAVDFLRYYAAQARRLLN-----------GPGHKPLGPVVCISPWNFPLAIFTGQIA  698 (1208)
T ss_pred             HHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-----------CceecCccEEEEEcCCcCHHHHHHHHHH
Confidence            99999999999999975 67999999999999988765421           2457899999999999999999999999


Q ss_pred             HHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (502)
Q Consensus       182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~  261 (502)
                      +||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.+++..|+.||+|+.|.||||+++|+.|.+.++..
T Consensus       699 aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~  778 (1208)
T PRK11905        699 AALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKR  778 (1208)
T ss_pred             HHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999998878999999999999999999999999999988732


Q ss_pred             --CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735          262 --NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA  339 (502)
Q Consensus       262 --~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~  339 (502)
                        ..+|+++|+|||||+||++|||+|.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.+.+
T Consensus       779 ~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~  858 (1208)
T PRK11905        779 SGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLS  858 (1208)
T ss_pred             cCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhcc
Confidence              258999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeC--CHHH
Q 010735          340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEE  416 (502)
Q Consensus       340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~e  416 (502)
                      +++||+|++.+++++.++|+++...|+.++.|+.... ..|+|+.|||+. + +++.++++|+||||++|++|+  +++|
T Consensus       859 t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~~dlde  936 (1208)
T PRK11905        859 TDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKADELDR  936 (1208)
T ss_pred             CCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCCCCHHH
Confidence            9999999999999999999999999998887764322 369999999996 3 578899999999999999997  6999


Q ss_pred             HHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC--CCCCCcCCCCCCCCCC-cchHHHHHhhhhccEEE
Q 010735          417 AIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFGR-DCGLESLHNYLQVKSVV  493 (502)
Q Consensus       417 ai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~g~-~~g~~~~~~~~~~k~v~  493 (502)
                      +|+++|+++|||+++|||+|.+.++++++++++|+||||+....  .+.+||||+|.||+|. .+|++++++|++.|+++
T Consensus       937 aI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~ 1016 (1208)
T PRK11905        937 VIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTP 1016 (1208)
T ss_pred             HHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceee
Confidence            99999999999999999999999999999999999999997653  3568999999999994 99999999999999987


Q ss_pred             Ee
Q 010735          494 TP  495 (502)
Q Consensus       494 ~~  495 (502)
                      ++
T Consensus      1017 ~~ 1018 (1208)
T PRK11905       1017 IP 1018 (1208)
T ss_pred             cc
Confidence            65


No 107
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1  (ALDH3A1, ALDH3B1,  EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar  sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=100.00  E-value=2e-84  Score=671.64  Aligned_cols=418  Identities=29%  Similarity=0.448  Sum_probs=384.7

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcC
Q 010735           63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG  142 (502)
Q Consensus        63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~  142 (502)
                      ++++.|++||+  .|+.+|..+|.++|++++++|++++++|++++++|+|||..++...|+..+++.+++++..++...+
T Consensus         2 ~~v~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~   79 (426)
T cd07087           2 ELVARLRETFL--TGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMK   79 (426)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            47899999999  8999999999999999999999999999999999999998766666999999999999887665432


Q ss_pred             ee-eec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCce
Q 010735          143 EV-LKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV  218 (502)
Q Consensus       143 ~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~  218 (502)
                      .. ...   ..+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..++++|.+ |+|+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv  158 (426)
T cd07087          80 PRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEA  158 (426)
T ss_pred             CcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCE
Confidence            21 111   1234568899999999999999999999999999999999999999999999999999999999 699999


Q ss_pred             EEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhcc
Q 010735          219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN  298 (502)
Q Consensus       219 ~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~  298 (502)
                      +++++++ .+.+..|+.|+ +|.|.||||+++|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus       159 ~~vv~g~-~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~  235 (426)
T cd07087         159 VAVVEGG-VEVATALLAEP-FDHIFFTGSPAVGKIVMEAAA-KHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN  235 (426)
T ss_pred             EEEEeCC-chHHHHHHhCC-CCEEEEeCChHHHHHHHHHHH-hhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhc
Confidence            9999984 45688999998 999999999999999999887 77899999999999999999999999999999999999


Q ss_pred             CCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCC
Q 010735          299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK  378 (502)
Q Consensus       299 ~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~  378 (502)
                      +||.|+++++||||++++|+|+++|++++++++.++| ++++++||++++.+++++.++++++     ++++||.... +
T Consensus       236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~~-~  308 (426)
T cd07087         236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVDK-E  308 (426)
T ss_pred             cCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccCC-C
Confidence            9999999999999999999999999999999986666 4688999999999999999999764     8999997643 6


Q ss_pred             CceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcC
Q 010735          379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF  458 (502)
Q Consensus       379 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~  458 (502)
                      |+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++++++++|+|+||+.+
T Consensus       309 g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~  388 (426)
T cd07087         309 ERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVL  388 (426)
T ss_pred             CCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999976


Q ss_pred             C--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          459 A--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       459 ~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      .  ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       389 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~  425 (426)
T cd07087         389 LHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL  425 (426)
T ss_pred             cccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence            4  3478999999999999999999999999999874


No 108
>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=1.7e-82  Score=599.56  Aligned_cols=460  Identities=30%  Similarity=0.526  Sum_probs=427.8

Q ss_pred             eCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 010735           32 DSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA  111 (502)
Q Consensus        32 ~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~  111 (502)
                      ...+.+.++.+.|+||+.+++++.-++.|+++.+..|++||+  .|.+.+...|.++|+.+.+.+.+|.|.+++..++||
T Consensus        59 ~~~~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQk--tW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDt  136 (583)
T KOG2454|consen   59 SQQSDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQK--TWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDT  136 (583)
T ss_pred             CcCCCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHh--hhhhccHHHHHHHHHHHHHHHhhchhheeeeeeccc
Confidence            334567899999999999999999999999999999999999  899999999999999999999999999999999999


Q ss_pred             CCCHHHHhhccHHHHHHHHHHHHHhhhh-hcCeeeecc---cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcC
Q 010735          112 GKLHSWAKMGDIPGAANTLRYYAGAADK-IHGEVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAG  187 (502)
Q Consensus       112 Gk~~~~~~~~ev~~~~~~l~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaG  187 (502)
                      ||+..++..+||..+.+.+.+.....++ +..+..|..   .-...++.++|+||+..|.|||||+.+.+.+++.||.+|
T Consensus       137 GKTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsG  216 (583)
T KOG2454|consen  137 GKTMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSG  216 (583)
T ss_pred             CchhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcC
Confidence            9999999999999999999988766543 222222221   224578999999999999999999999999999999999


Q ss_pred             CeEEEecCCCcHHHHHHHHHHH----HHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCC
Q 010735          188 CTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL  263 (502)
Q Consensus       188 N~vv~kps~~~~~~~~~l~~~l----~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~  263 (502)
                      |++|+|-|+.+.++.....+++    ...|-|++++|++++- ++.+++|.+|+.++.+.|.||..+++.|++.++ +.+
T Consensus       217 NaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl-pd~a~~ltSh~g~khitFiGSqpvak~i~~~AA-k~L  294 (583)
T KOG2454|consen  217 NAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL-PDTAEALTSHSGVKHITFIGSQPVAKMIMRNAA-KTL  294 (583)
T ss_pred             CeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC-cchHhHhhcCCCcceEEEecCcHHHHHHHHhhh-hhc
Confidence            9999999999999887766654    5569999999999994 478999999999999999999999999999988 899


Q ss_pred             CceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCccc
Q 010735          264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG  343 (502)
Q Consensus       264 ~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~g  343 (502)
                      +|+++|+|||+++||.+|+|++..+.-++++.|-.+||.|+..+|++||+++||.|+..|.++++.++.|.|...+.+||
T Consensus       295 TPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMG  374 (583)
T KOG2454|consen  295 TPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMG  374 (583)
T ss_pred             CcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735          344 PQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK  419 (502)
Q Consensus       344 pl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~  419 (502)
                      .|++..+++.++.++++|+.+||+++.||.+-.    ..|.|++||++.+++++|++++||.||||++++++++.|++|+
T Consensus       375 Am~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~  454 (583)
T KOG2454|consen  375 AMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIK  454 (583)
T ss_pred             hhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHh
Confidence            999999999999999999999999999998642    4799999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735          420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~  495 (502)
                      ++|+++|||.++||+.|..+++++++.+++|.|.||+... +...+||||+|.||+||+.|.+|++..++.|+|.++
T Consensus       455 lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd  531 (583)
T KOG2454|consen  455 LANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYD  531 (583)
T ss_pred             hccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccccccHHHHHHHhcccceecc
Confidence            9999999999999999999999999999999999999876 446799999999999999999999999999999665


No 109
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of  endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an  important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in  metabolic pathways, or as  binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme  is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=100.00  E-value=1.5e-80  Score=647.52  Aligned_cols=428  Identities=51%  Similarity=0.841  Sum_probs=403.0

Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhc
Q 010735           62 DLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH  141 (502)
Q Consensus        62 ~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~  141 (502)
                      +++++.|++|++  .|+.++.++|.++|+++++.|.++.++|++++++|+||+..+ ...|+..+++.+++++...+...
T Consensus         1 ~~av~~a~~a~~--~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~-~~~ei~~~i~~l~~~~~~~~~~~   77 (432)
T cd07078           1 DAAVAAARAAFK--AWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEE-ALGEVARAADTFRYYAGLARRLH   77 (432)
T ss_pred             CHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHHHHhc
Confidence            368899999999  899999999999999999999999999999999999999884 56799999999999888776654


Q ss_pred             Cee-eecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEE
Q 010735          142 GEV-LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN  220 (502)
Q Consensus       142 ~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~  220 (502)
                      +.. .....+...+.+++|+|||++|+|||||+...++.+++||++||+||+|||+.+|.++..+.++|.++|+|+++++
T Consensus        78 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~  157 (432)
T cd07078          78 GEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLN  157 (432)
T ss_pred             CccccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEE
Confidence            433 2223456678999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCC
Q 010735          221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG  300 (502)
Q Consensus       221 ~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~G  300 (502)
                      ++++++.+....|..|+++|.|.||||..+++.|.+.++ .+++|+++|+||++++||++|+|++.|++.+++++|.++|
T Consensus       158 ~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~-~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~G  236 (432)
T cd07078         158 VVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAA-ENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG  236 (432)
T ss_pred             EEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh-hccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccC
Confidence            999876668899999999999999999999999999987 7789999999999999999999999999999999999999


Q ss_pred             CCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC-CC
Q 010735          301 EICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KG  379 (502)
Q Consensus       301 q~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g  379 (502)
                      |.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++.++++++..+|+++++||..+.. .|
T Consensus       237 q~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g  316 (432)
T cd07078         237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKG  316 (432)
T ss_pred             CCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999976542 48


Q ss_pred             ceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC
Q 010735          380 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA  459 (502)
Q Consensus       380 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~  459 (502)
                      +|++|||+.+++++++++++|+||||++|++|++++|||+++|+.++||+++|||+|.+.++++++++++|.|+||+++.
T Consensus       317 ~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~  396 (432)
T cd07078         317 YFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSV  396 (432)
T ss_pred             cEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             C-CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          460 F-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       460 ~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      . .+.+||||.|.||+|+++|++|+++|++.|+++
T Consensus       397 ~~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~  431 (432)
T cd07078         397 GAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT  431 (432)
T ss_pred             CCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence            6 789999999999999999999999999999874


No 110
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=100.00  E-value=8.7e-81  Score=648.54  Aligned_cols=415  Identities=25%  Similarity=0.332  Sum_probs=373.4

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhh
Q 010735           61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI  140 (502)
Q Consensus        61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~  140 (502)
                      ++++++.|++||+  .|+.+|..+|.++|++++++|+++.++|++++++|+|||..+. ..|+..+++.+++++..++..
T Consensus         1 v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~-~~ev~~~~~~l~~~a~~~~~~   77 (454)
T cd07129           1 VDAAAAAAAAAFE--SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARL-QGELGRTTGQLRLFADLVREG   77 (454)
T ss_pred             ChHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence            4789999999999  8999999999999999999999999999999999999999864 579999999999998876542


Q ss_pred             c--Ceeeec-------ccccccceeecCCeEEEEEcCCChhHHh--hhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHH
Q 010735          141 H--GEVLKM-------SRALQGYTLREPIGVVGHIIPWNFPTTM--FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA  209 (502)
Q Consensus       141 ~--~~~~~~-------~~~~~~~~~~~P~Gvv~~i~p~n~P~~~--~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l  209 (502)
                      .  +.....       ..+...+++++|+|||++|+|||||+..  .++++++||++||+||+|||+.+|.++.++++++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~  157 (454)
T cd07129          78 SWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAI  157 (454)
T ss_pred             CCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHH
Confidence            2  111110       0123457889999999999999999988  4589999999999999999999999999998876


Q ss_pred             ----HHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC-CCCceEEecCCCCceEEccCC--
Q 010735          210 ----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-NLKPVSLELGGKSPLLIFDDV--  282 (502)
Q Consensus       210 ----~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~-~~~~~~~e~gG~~~~iV~~da--  282 (502)
                          .++|+|+|++|++++++.+.+..|+.|++++.|+||||+.+|+.|++.++.+ .++|+++|+|||||+||++|+  
T Consensus       158 ~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~  237 (454)
T cd07129         158 RAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALA  237 (454)
T ss_pred             HHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcch
Confidence                4899999999999997767899999999999999999999999999988732 689999999999999999999  


Q ss_pred             -CHHHHHHHHHHHHhccCCCCcCCCcEEEEecc-cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 010735          283 -DVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH  360 (502)
Q Consensus       283 -dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~  360 (502)
                       |++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|.++++++++          ||++++.+.++..+.+++
T Consensus       238 ~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~----------g~~~~~~~~~~~~~~i~~  307 (454)
T cd07129         238 ERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA----------QTMLTPGIAEAYRQGVEA  307 (454)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC----------CCCcChHHHHHHHHHHHH
Confidence             89999999999999999999999999999999 999999999999998865          466777777888888899


Q ss_pred             HHHc-CCEEEeCCcccCCCCceEecEEEeeCC---CCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCC
Q 010735          361 GKRE-GATLLTGGKPIGKKGYYIEPTIFTNVT---EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD  436 (502)
Q Consensus       361 a~~~-Ga~v~~gg~~~~~~g~~~~Ptvl~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d  436 (502)
                      +.++ |+++++||... .+|+|++|||+...+   ++|+++++|+||||++|++|+|.||+|+++|+++|||++||||+|
T Consensus       308 a~~~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d  386 (454)
T cd07129         308 LAAAPGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEE  386 (454)
T ss_pred             HHhcCCcEEEeCCCcC-CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccC
Confidence            9988 99999999764 368999999997555   689999999999999999999999999999999999999999999


Q ss_pred             --HHHHHHHHhhc--ceeEEEEcCcCCCC---CCCCcCC-CCCCCCCCc--chHHHHHhhhhc
Q 010735          437 --LNVANTVSRSI--RAGIIWINCYFAFD---SDCPYGG-YKMSGFGRD--CGLESLHNYLQV  489 (502)
Q Consensus       437 --~~~~~~~~~~l--~~g~v~iN~~~~~~---~~~pfgG-~~~SG~g~~--~g~~~~~~~~~~  489 (502)
                        .+.++++++++  ++|+|+||+++...   +.+|||| +|.||+|++  +|.+++++|+++
T Consensus       387 ~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~  449 (454)
T cd07129         387 DDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRP  449 (454)
T ss_pred             chHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhccc
Confidence              79999999999  69999999875432   5899999 999999999  799999999997


No 111
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=100.00  E-value=3.3e-80  Score=646.92  Aligned_cols=434  Identities=19%  Similarity=0.236  Sum_probs=373.1

Q ss_pred             eEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Q 010735           38 TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW  117 (502)
Q Consensus        38 ~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~  117 (502)
                      .=.=+||+|++++++++.++.   ++++++|++||+  .|+.++..+|.++|++++++|+++.++|++++++|+|||+.+
T Consensus        66 ~~~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~--~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~  140 (551)
T TIGR02288        66 VGGERSPYGVELGVTYPQCDG---DALLDAAHAALP--GWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMM  140 (551)
T ss_pred             cccccCCCCCCEEEEEcCCCH---HHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHH
Confidence            345579999999999999995   899999999999  899999999999999999999999999999999999999986


Q ss_pred             Hhh-c---cHHHHHHHHHHHHHhhhhhcCeee---ecc-cc---cccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHc
Q 010735          118 AKM-G---DIPGAANTLRYYAGAADKIHGEVL---KMS-RA---LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAA  186 (502)
Q Consensus       118 ~~~-~---ev~~~~~~l~~~~~~~~~~~~~~~---~~~-~~---~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaa  186 (502)
                      +.. +   ++.+.++.+++++....++.+...   +.. ..   ...+..++|+|||++|+|||||+++.++++++||++
T Consensus       141 a~e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaa  220 (551)
T TIGR02288       141 AFQAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLAT  220 (551)
T ss_pred             HHhccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHc
Confidence            532 1   678889999999888776655432   111 11   112347899999999999999999999999999999


Q ss_pred             CCeEEEecCCCcHHHHH----HHHHHHHHcCCCCceEEEecCC-chhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC
Q 010735          187 GCTMIVKPAEQTPLIAL----YFAHLAKLAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (502)
Q Consensus       187 GN~vv~kps~~~~~~~~----~l~~~l~~aGlP~g~~~~v~g~-~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~  261 (502)
                      ||+||+|||+.+|+++.    .+.++|.++|+|+|++|++++. +.++++.|+.||+|+.|.||||+++|+.|++.++  
T Consensus       221 GN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--  298 (551)
T TIGR02288       221 GNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--  298 (551)
T ss_pred             CCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--
Confidence            99999999999999655    5679999999999999999985 6778999999999999999999999999999865  


Q ss_pred             CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecc---------cHHHHHHHHHHHHhcccc
Q 010735          262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG---------IYDEFEKKLVEKAKAWVV  332 (502)
Q Consensus       262 ~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~---------i~~~f~~~l~~~~~~~~~  332 (502)
                       .+++++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|||||++         +||+|+++|+++++++ +
T Consensus       299 -~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-v  376 (551)
T TIGR02288       299 -QAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-L  376 (551)
T ss_pred             -cCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-c
Confidence             4799999999999999999999999999999999999999999999999999         7999999999999999 9


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCC-ceEecEEEeeCCCCCcccccceeeceEEE
Q 010735          333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKG-YYIEPTIFTNVTEDMLIAKNEIFGPVMAL  408 (502)
Q Consensus       333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g-~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v  408 (502)
                      |+|.++.+++|||+++.+++++    ++++..| ++++||....   .+| +|++|||+...+++|++++||+||||++|
T Consensus       377 Gdp~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V  451 (551)
T TIGR02288       377 GDPARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFV  451 (551)
T ss_pred             CCcccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEE
Confidence            9999999999999999999996    5566778 6666665421   135 68899999433359999999999999999


Q ss_pred             EEeCCHHHHHHHHhcC--CCC-ceEEEecCCHHHHHHHHhhc----------ceeEEEEcCcCCCCCCCCcCCCCCCCCC
Q 010735          409 MKFKTVEEAIKSANNT--RYG-LAAGIMTKDLNVANTVSRSI----------RAGIIWINCYFAFDSDCPYGGYKMSGFG  475 (502)
Q Consensus       409 ~~~~~~~eai~~~n~~--~~g-l~~~v~t~d~~~~~~~~~~l----------~~g~v~iN~~~~~~~~~pfgG~~~SG~g  475 (502)
                      ++|+|.||||+++|++  +|| |+++|||+|.+.++++.+++          ++|.|+||+.      .||++.+.||..
T Consensus       452 ~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~------~~~~~~~~sg~n  525 (551)
T TIGR02288       452 VAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQS------AAFSDFHGTGGN  525 (551)
T ss_pred             EEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccC------CCCCCCCCCCCC
Confidence            9999999999999998  566 99999999999999999999          6677777764      456666666655


Q ss_pred             Cc-chHHHHHhhhhccE
Q 010735          476 RD-CGLESLHNYLQVKS  491 (502)
Q Consensus       476 ~~-~g~~~~~~~~~~k~  491 (502)
                      .- +..+.-..|...+-
T Consensus       526 ~~a~~~~~~~~~~~~r~  542 (551)
T TIGR02288       526 PAANASLSDGAFVANRF  542 (551)
T ss_pred             CccCCcccchhhhhcce
Confidence            32 23344455555543


No 112
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=100.00  E-value=2.3e-80  Score=642.78  Aligned_cols=414  Identities=22%  Similarity=0.250  Sum_probs=372.8

Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhh-
Q 010735           62 DLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI-  140 (502)
Q Consensus        62 ~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~-  140 (502)
                      +++++.|++||+  .|+++|.++|.++|++++++|+++.++|++++++|+|||. +. ..|+..+++.+++++..+... 
T Consensus         2 ~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~-~~ev~~~i~~~~~~~~~~~~~~   77 (442)
T cd07084           2 ERALLAADISTK--AARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MF-AENICGDQVQLRARAFVIYSYR   77 (442)
T ss_pred             hHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hh-hhhhcchHHHHHHHHHHHHhcc
Confidence            678999999999  8999999999999999999999999999999999999999 44 469999999999998877543 


Q ss_pred             -cCeee---ecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCC-C
Q 010735          141 -HGEVL---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV-P  215 (502)
Q Consensus       141 -~~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGl-P  215 (502)
                       .+...   +.......+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++.++|+ |
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P  157 (442)
T cd07084          78 IPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLP  157 (442)
T ss_pred             ccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCC
Confidence             11111   101124568899999999999999999999999999999999999999999999999999999999998 9


Q ss_pred             CceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCC-CHHHHHHHHHHH
Q 010735          216 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV-DVNTAADMALLG  294 (502)
Q Consensus       216 ~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~da-dl~~aa~~iv~~  294 (502)
                      ++++++++++++ .+..|+.|++++.|.||||+++|+.|++.++ .  +|+++|+|||||+||++|| |++.+++.++++
T Consensus       158 ~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~-~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~  233 (442)
T cd07084         158 PEDVTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAK-Q--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQD  233 (442)
T ss_pred             ccceEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhcc-C--CcEEEeccCcCcEEECCChhhHHHHHHHHHHH
Confidence            999999999765 8899999999999999999999999999875 2  8999999999999999999 699999999999


Q ss_pred             HhccCCCCcCCCcEEEEecc-cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc-CCEEEeCC
Q 010735          295 ILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGG  372 (502)
Q Consensus       295 ~~~~~Gq~C~s~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~v~~gg  372 (502)
                      +|.|+||.|+++++||||++ ++++|+++|+++++++++|     ++.+||++++.    +.++++++.+. |+++++||
T Consensus       234 ~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~~----~~~~i~~a~~~gga~~~~gg  304 (442)
T cd07084         234 MTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTFT----TLAMIAHMENLLGSVLLFSG  304 (442)
T ss_pred             HhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhHH----HHHHHHHHHhcCCcEEEeCC
Confidence            99999999999999999999 9999999999999999998     67899997664    45556667777 59999999


Q ss_pred             cccC------CCCceEecEEEeeCCCCC---cccccceeeceEEEEEeCC--HHHHHHHHhcCCCCceEEEecCCHHHHH
Q 010735          373 KPIG------KKGYYIEPTIFTNVTEDM---LIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVAN  441 (502)
Q Consensus       373 ~~~~------~~g~~~~Ptvl~~~~~~~---~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~t~d~~~~~  441 (502)
                      ....      ..|+|++|||+.+++++|   ++++||+||||++|++|+|  ++|+|+++|+++|||++||||+|.+.++
T Consensus       305 ~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~  384 (442)
T cd07084         305 KELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQ  384 (442)
T ss_pred             cccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHH
Confidence            7532      248999999999999997   9999999999999999999  9999999999999999999999999999


Q ss_pred             HHHhhc-ceeEEEEcCc--CCCCCCCCcCC-CCCCCCCCcc-hHHHHHhhhhccEE
Q 010735          442 TVSRSI-RAGIIWINCY--FAFDSDCPYGG-YKMSGFGRDC-GLESLHNYLQVKSV  492 (502)
Q Consensus       442 ~~~~~l-~~g~v~iN~~--~~~~~~~pfgG-~~~SG~g~~~-g~~~~~~~~~~k~v  492 (502)
                      ++++++ ++|+||||+.  ....+..|||| .|.||+|++. |.+++++|++...+
T Consensus       385 ~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~  440 (442)
T cd07084         385 ELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE  440 (442)
T ss_pred             HHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence            999999 9999999976  33446677866 8899999986 99999999987644


No 113
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ  (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system.  This CD is limited to bacterial monofunctional enzymes.
Probab=100.00  E-value=3.4e-79  Score=640.98  Aligned_cols=449  Identities=18%  Similarity=0.218  Sum_probs=391.9

Q ss_pred             CCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Q 010735           33 SVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAG  112 (502)
Q Consensus        33 ~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~G  112 (502)
                      +.++...+++||+|++.+++++.+   |++++|++|++|++  .|++++..+|.++|++++++|.+++++|++++++|+|
T Consensus        61 ~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~--~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~G  135 (549)
T cd07127          61 GASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMP--GWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTG  135 (549)
T ss_pred             CCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHC
Confidence            346788999999999999899988   89999999999999  8999999999999999999999999999999999999


Q ss_pred             CCHHHHhhc----cHHHHHHHHHHHHHhhhhhcCeeeecc-cc------cccceeecCCeEEEEEcCCChhHHhhhhhHH
Q 010735          113 KLHSWAKMG----DIPGAANTLRYYAGAADKIHGEVLKMS-RA------LQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (502)
Q Consensus       113 k~~~~~~~~----ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~  181 (502)
                      |+..++...    |++++++.++|++....++.+...+.. .+      ......++|+||+++|+|||||+++.+.+++
T Consensus       136 k~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~  215 (549)
T cd07127         136 QAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLF  215 (549)
T ss_pred             CCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHH
Confidence            999866432    699999999999888776654322111 01      1123478999999999999999999999999


Q ss_pred             HHHHcCCeEEEecCCCcHHHHH----HHHHHHHHcCCCCceEEEecCC-chhHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735          182 PALAAGCTMIVKPAEQTPLIAL----YFAHLAKLAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ  256 (502)
Q Consensus       182 ~ALaaGN~vv~kps~~~~~~~~----~l~~~l~~aGlP~g~~~~v~g~-~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~  256 (502)
                      +||++||+||+|||+.+|+++.    .+.++|.++|+|+|+||++++. +.++++.|+.||+++.|.||||+.+|+.|.+
T Consensus       216 ~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~  295 (549)
T cd07127         216 ASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEA  295 (549)
T ss_pred             HHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHH
Confidence            9999999999999999998864    4668999999999999999985 4678999999999999999999999999999


Q ss_pred             HHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecc---------cHHHHHHHHHHHH
Q 010735          257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG---------IYDEFEKKLVEKA  327 (502)
Q Consensus       257 ~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~---------i~~~f~~~l~~~~  327 (502)
                      .++   .+|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|||||++         +||+|+++|++++
T Consensus       296 ~a~---~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~  372 (549)
T cd07127         296 NAR---QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAI  372 (549)
T ss_pred             Hhc---cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHH
Confidence            975   4799999999999999999999999999999999999999999999999999         8999999999999


Q ss_pred             hccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCC-ceEecEEEeeCCCCCcccccceee
Q 010735          328 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKG-YYIEPTIFTNVTEDMLIAKNEIFG  403 (502)
Q Consensus       328 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g-~~~~Ptvl~~~~~~~~~~~~E~fg  403 (502)
                      +++ +|+|.+..+.+|||+++.+++++.+    ++..|+ +++||..+.   .+| ++++|||+...+++|++++||+||
T Consensus       373 ~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FG  446 (549)
T cd07127         373 DGL-LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFG  446 (549)
T ss_pred             HHh-cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcC
Confidence            999 9999999999999999999999865    455665 778876542   134 466999999888999999999999


Q ss_pred             ceEEEEEeCCHHHHHHHHhcCC--C-CceEEEecCCHHHHHHHHhhc-cee-EEEEcCcCCCCCCC--CcCCCCCCCCCC
Q 010735          404 PVMALMKFKTVEEAIKSANNTR--Y-GLAAGIMTKDLNVANTVSRSI-RAG-IIWINCYFAFDSDC--PYGGYKMSGFGR  476 (502)
Q Consensus       404 Pvl~v~~~~~~~eai~~~n~~~--~-gl~~~v~t~d~~~~~~~~~~l-~~g-~v~iN~~~~~~~~~--pfgG~~~SG~g~  476 (502)
                      ||++|++|+|.+|||+++|++.  + ||+++|||+|.+.++++.+++ ++| .++||.+..+...+  ||||.+.||...
T Consensus       447 PVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~  526 (549)
T cd07127         447 PIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANP  526 (549)
T ss_pred             ceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCc
Confidence            9999999999999999999974  4 599999999999999999995 554 99999766544444  599999999886


Q ss_pred             -cchHHHHHhhhhccEEEEe
Q 010735          477 -DCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       477 -~~g~~~~~~~~~~k~v~~~  495 (502)
                       .+.......|...+--+++
T Consensus       527 ~a~~~~~~~~fv~~r~~~~~  546 (549)
T cd07127         527 AANAALTDGAFVANRFRVVQ  546 (549)
T ss_pred             ccccccchhhhhhcceEEEE
Confidence             4445777777776644443


No 114
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=1.5e-80  Score=592.44  Aligned_cols=423  Identities=26%  Similarity=0.409  Sum_probs=384.0

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhh
Q 010735           61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI  140 (502)
Q Consensus        61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~  140 (502)
                      +++.++.+|.+|.  .-+..|.+-|.+.|+++.+++++|.+++.+++..|.+|+..++...|+...+..++++....+..
T Consensus         4 ~~~~v~~~R~~F~--sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~w   81 (477)
T KOG2456|consen    4 ISETVRRLRLAFS--SGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEW   81 (477)
T ss_pred             HHHHHHHHHHHHh--cCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHh
Confidence            4566899999999  56999999999999999999999999999999999999999888888888888888776654432


Q ss_pred             c-Ceeee---cccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCC
Q 010735          141 H-GEVLK---MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD  216 (502)
Q Consensus       141 ~-~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~  216 (502)
                      . .+..+   .......+++.+|+|||++|+|||||+...+.++++||+|||+||+|||+.+|.++..+++++.++ ++.
T Consensus        82 v~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~  160 (477)
T KOG2456|consen   82 VKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQ  160 (477)
T ss_pred             ccccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCc
Confidence            2 11111   112356789999999999999999999999999999999999999999999999999999999999 999


Q ss_pred             ceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHh
Q 010735          217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL  296 (502)
Q Consensus       217 g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~  296 (502)
                      +++.||.|.-+++ ..|..| +.|.|+||||+.+|+.|+.+|+ ++++||++|+|||+|++|++|+|++-++++|+|+++
T Consensus       161 ~~~~VV~Ggv~ET-t~LL~~-rfD~IfyTGsp~VgkIim~aAa-KhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~  237 (477)
T KOG2456|consen  161 DLIRVVNGGVPET-TELLKQ-RFDHIFYTGSPRVGKIIMAAAA-KHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW  237 (477)
T ss_pred             ceEEEecCCCchH-HHHHHh-hccEEEecCCchHHHHHHHHHH-hcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh
Confidence            9999999954454 455555 7999999999999999999988 999999999999999999999999999999999999


Q ss_pred             ccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC
Q 010735          297 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG  376 (502)
Q Consensus       297 ~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~  376 (502)
                      .|+||.|.+|++|+++.++++.|+++++..++++. |+...++.+++.+|+..|++|+..++++-    .+|+.||..+.
T Consensus       238 ~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFY-G~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d~  312 (477)
T KOG2456|consen  238 MNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFY-GENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESDE  312 (477)
T ss_pred             ccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHh-CCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccch
Confidence            99999999999999999999999999999999975 55566789999999999999999998653    58999998765


Q ss_pred             CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcC
Q 010735          377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC  456 (502)
Q Consensus       377 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~  456 (502)
                       ...|+.|||+.|+++++++|+||+|||||+|+.|.+++|+|+++|..+..|++|+||+|.+...++.+++.+|.|.+|+
T Consensus       313 -~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND  391 (477)
T KOG2456|consen  313 -SDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVND  391 (477)
T ss_pred             -hhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecc
Confidence             5679999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735          457 YFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       457 ~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~  495 (502)
                      ...  ....+||||+|.||+|++||++|++.|++.|++...
T Consensus       392 ~i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~r  432 (477)
T KOG2456|consen  392 VIMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLR  432 (477)
T ss_pred             eEEEEEeeccCcCCcCccccccccccccccccccchhhhhc
Confidence            755  447899999999999999999999999999998654


No 115
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA.  This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium.  Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=100.00  E-value=4.1e-79  Score=628.55  Aligned_cols=401  Identities=20%  Similarity=0.241  Sum_probs=348.8

Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhh
Q 010735           58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA  137 (502)
Q Consensus        58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~  137 (502)
                      -+|+++++++|++||+  .|++++.++|.++|++++++|+++.++|++++++|+|||..++.       ++.+++++...
T Consensus         3 ~~~v~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~   73 (429)
T cd07121           3 FATVDDAVAAAKAAQK--QYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKT   73 (429)
T ss_pred             hhhHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhc
Confidence            3689999999999999  89999999999999999999999999999999999999997642       44555554422


Q ss_pred             hhhcCe-ee-ecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHH----HH
Q 010735          138 DKIHGE-VL-KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KL  211 (502)
Q Consensus       138 ~~~~~~-~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l----~~  211 (502)
                      ...... .. ........+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++    .+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~  153 (429)
T cd07121          74 PGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAE  153 (429)
T ss_pred             CcccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHH
Confidence            111000 00 0011223578899999999999999999999999999999999999999999999999999887    47


Q ss_pred             cCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHH
Q 010735          212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA  291 (502)
Q Consensus       212 aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~i  291 (502)
                      +|+|+|++|++++++.+.++.|++||+||.|+||||+.+|+.|++.     .+|+++|+|||||+||++|||++.|++.+
T Consensus       154 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa~~i  228 (429)
T cd07121         154 AGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAARDI  228 (429)
T ss_pred             cCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHHHHH
Confidence            8999999999998766789999999999999999999999999874     48999999999999999999999999999


Q ss_pred             HHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc--CCEEE
Q 010735          292 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE--GATLL  369 (502)
Q Consensus       292 v~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~--Ga~v~  369 (502)
                      ++++|+|+||.|++++|||||+++||+|+++|+++ .              .++++..+++++.++++++...  |++++
T Consensus       229 ~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~  293 (429)
T cd07121         229 VQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPNKKW  293 (429)
T ss_pred             HhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC-C--------------CEEcCHHHHHHHHHhhcccCCCccccccc
Confidence            99999999999999999999999999999999876 1              1368899999999999998864  68999


Q ss_pred             eCCccc---CCCCceEe---cEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCc--eEEEecCCHHHHH
Q 010735          370 TGGKPI---GKKGYYIE---PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL--AAGIMTKDLNVAN  441 (502)
Q Consensus       370 ~gg~~~---~~~g~~~~---Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~~v~t~d~~~~~  441 (502)
                      .||...   ...|.|+.   |||+.+++++|++++||+||||++|++|+|+||||+++|+++|||  +++|||+|.+.++
T Consensus       294 ~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~  373 (429)
T cd07121         294 VGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLT  373 (429)
T ss_pred             cCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHH
Confidence            998541   12477877   599999999999999999999999999999999999999999999  9999999999999


Q ss_pred             HHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCC--CCcchHHHHHhhhhccEEE
Q 010735          442 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGF--GRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       442 ~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~--g~~~g~~~~~~~~~~k~v~  493 (502)
                      ++++++++|.||||++..  +.+||||+|.|++  |..-| +|+   +.+|+++
T Consensus       374 ~~a~~l~aG~v~iN~~~~--~~~p~gG~k~s~~~~~~~~~-~~~---~~~~~~~  421 (429)
T cd07121         374 KMARAMQTTIFVKNGPSY--AGLGVGGEGYTTFTIAGPTG-EGL---TSARTFT  421 (429)
T ss_pred             HHHhhCCceEEEEcCCCc--CccccCCCccceEEecCCcC-cCc---cChhhhh
Confidence            999999999999998754  6799999999998  54333 333   5555543


No 116
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=100.00  E-value=8e-79  Score=587.18  Aligned_cols=461  Identities=43%  Similarity=0.766  Sum_probs=429.2

Q ss_pred             CCCCcccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 010735           14 FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFA   93 (502)
Q Consensus        14 ~~~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a   93 (502)
                      ..+....+...||+|+++++++++++..+||.|+.+|++++.++..|+++|+++|+.||+.|.|++++..+|.+.+.+++
T Consensus       414 n~~~~~~ph~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la  493 (881)
T KOG2452|consen  414 NKRTVRMPHQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLA  493 (881)
T ss_pred             ccceecCcHhhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhcc
Confidence            34455666778999999999999999999999999999999999999999999999999988899999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc----cccccceeecCCeEEEEEcCC
Q 010735           94 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPW  169 (502)
Q Consensus        94 ~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~  169 (502)
                      +++++|+++|+.+.+++.|....-+...-+...++.+||++.|.+++.+..+|+.    ....+.+.++|+|||.+|.||
T Consensus       494 ~lme~h~eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pw  573 (881)
T KOG2452|consen  494 DLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPW  573 (881)
T ss_pred             chhhhccchhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccC
Confidence            9999999999999999999665544455677889999999999999988887764    334567999999999999999


Q ss_pred             ChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcH
Q 010735          170 NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD  249 (502)
Q Consensus       170 n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~  249 (502)
                      |||+..+.|+.+.+|++--              ..+++       -.|++++++|.+.-+++.|..||+++.|-||||++
T Consensus       574 nyplmmlswk~aaclaa~~--------------~k~~e-------~sgvini~~gsgslvg~rls~hpdvrkigftgste  632 (881)
T KOG2452|consen  574 NYPLMMLSWKTAACLAAQV--------------LKFAE-------LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTE  632 (881)
T ss_pred             CchHHHHHHHHHHHHHHHH--------------hhhhh-------hcceEEEecCCcchhccccccCCccceeccccchH
Confidence            9999999999999997421              11222       24789999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhc
Q 010735          250 VGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA  329 (502)
Q Consensus       250 ~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~  329 (502)
                      +|+.|++.++..+.|++.+|+||++|+||..|||+++|++.-..+.|++-|..|++.-|+||.+++.|+|+.++++.+++
T Consensus       633 ig~~im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~  712 (881)
T KOG2452|consen  633 VGKHIMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRK  712 (881)
T ss_pred             HHHHHHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHh
Confidence            99999999997888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEE
Q 010735          330 WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM  409 (502)
Q Consensus       330 ~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~  409 (502)
                      +++|+|+|.+++-||-....|+.++.+|++.++..||++.|||++.+.+|.|++|||+.+++..|-+..||.||||+.|.
T Consensus       713 ~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is  792 (881)
T KOG2452|consen  713 MKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIIS  792 (881)
T ss_pred             hccCCcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEE
Confidence            99999999999999999999999999999999999999999999998899999999999999999999999999999999


Q ss_pred             EeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhh
Q 010735          410 KFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL  487 (502)
Q Consensus       410 ~~~~--~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~  487 (502)
                      +|+|  +|+.++.+|++++||+++|||+|...+.++++.+.+|+|+||.+.-.+...||||+|+||+|...|..++.+|.
T Consensus       793 ~f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~alneyl  872 (881)
T KOG2452|consen  793 RFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYL  872 (881)
T ss_pred             ecCCCCHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCccccccccchhHHHHhhhe
Confidence            9974  89999999999999999999999999999999999999999998888889999999999999999999999999


Q ss_pred             hccEEEEe
Q 010735          488 QVKSVVTP  495 (502)
Q Consensus       488 ~~k~v~~~  495 (502)
                      +.|+|++.
T Consensus       873 ~~ktit~e  880 (881)
T KOG2452|consen  873 RVKTVTFE  880 (881)
T ss_pred             eeEEEEee
Confidence            99999875


No 117
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=100.00  E-value=1e-77  Score=617.78  Aligned_cols=408  Identities=20%  Similarity=0.217  Sum_probs=346.3

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHH--HHHHHHHhhh
Q 010735           61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN--TLRYYAGAAD  138 (502)
Q Consensus        61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~--~l~~~~~~~~  138 (502)
                      ++++++.|++||+  .|+++|..+|.++|++++++|++|+++|++++++|+|||+.++. .++.....  ..++++.   
T Consensus         1 ~~~Ai~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~-~~~~~~~~~~~~~~~~~---   74 (439)
T cd07081           1 LDDAVAAAKVAQQ--GLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDK-VIKNHFAAEYIYNVYKD---   74 (439)
T ss_pred             CHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHhc---
Confidence            4789999999999  89999999999999999999999999999999999999998764 34443333  2222221   


Q ss_pred             hhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH----HcCC
Q 010735          139 KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGV  214 (502)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~----~aGl  214 (502)
                      ...+...+...+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+++++.    ++|+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~  154 (439)
T cd07081          75 EKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGA  154 (439)
T ss_pred             cccCceecCCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCC
Confidence            122222232223446889999999999999999999999999999999999999999999999988888875    7799


Q ss_pred             CCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHH
Q 010735          215 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG  294 (502)
Q Consensus       215 P~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~  294 (502)
                      |+|++|++++.+.+.++.|+.||+|++|.||||++    +.+.++ +.+||+++|+|||+|+||++|||++.|++.++++
T Consensus       155 P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa-~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~  229 (439)
T cd07081         155 PENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAY-SSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKS  229 (439)
T ss_pred             ChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHH-hcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHH
Confidence            99999999987777899999999999999999987    444555 6789999999999999999999999999999999


Q ss_pred             HhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc-
Q 010735          295 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-  373 (502)
Q Consensus       295 ~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~-  373 (502)
                      +|.|+||.|++.+|||||+++||+|+++|+++.               ||+++.++++++.++|+++..+|++++.|+. 
T Consensus       230 ~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~  294 (439)
T cd07081         230 KTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAY  294 (439)
T ss_pred             HhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHH
Confidence            999999999999999999999999999998873               8999999999999999999999998754432 


Q ss_pred             c-cCCCCceEecE---EEeeCC--CCCcccccceeeceEEEEEeCCHHHHHHHHhcC----CCCceEEEecCC---HHHH
Q 010735          374 P-IGKKGYYIEPT---IFTNVT--EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNT----RYGLAAGIMTKD---LNVA  440 (502)
Q Consensus       374 ~-~~~~g~~~~Pt---vl~~~~--~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~~v~t~d---~~~~  440 (502)
                      . ....|+|+.||   ++.+++  ++|++++||+||||++|++|+|+||||+++|++    +|||+++|||+|   .+++
T Consensus       295 ~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a  374 (439)
T cd07081         295 KIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENM  374 (439)
T ss_pred             HHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHH
Confidence            1 11258899998   998888  999999999999999999999999999999965    899999999999   9999


Q ss_pred             HHHHhhcceeEEEEcCcCCC---CCCCCcCCCCCC--CCCCcch-----HHHHHhhhhccEEEE
Q 010735          441 NTVSRSIRAGIIWINCYFAF---DSDCPYGGYKMS--GFGRDCG-----LESLHNYLQVKSVVT  494 (502)
Q Consensus       441 ~~~~~~l~~g~v~iN~~~~~---~~~~pfgG~~~S--G~g~~~g-----~~~~~~~~~~k~v~~  494 (502)
                      +++++++++|.|+||++..+   .-..-|||++.+  |.|..+|     ..+.++|++.|.|.+
T Consensus       375 ~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  438 (439)
T cd07081         375 NQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL  438 (439)
T ss_pred             HHHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence            99999999999999976522   223456566544  2333222     346889999888754


No 118
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=100.00  E-value=1.3e-77  Score=622.06  Aligned_cols=408  Identities=20%  Similarity=0.237  Sum_probs=353.4

Q ss_pred             CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHH
Q 010735           55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA  134 (502)
Q Consensus        55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~  134 (502)
                      ....+|++++++.|++||+  .|+.++.++|.++|++++++|++|.++|++++++|+|||..++..       ..+++++
T Consensus        32 ~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~  102 (465)
T PRK15398         32 MGVFASVDDAVAAAKVAQQ--RYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAA  102 (465)
T ss_pred             ccHHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHH
Confidence            4678999999999999999  899999999999999999999999999999999999999986532       3344444


Q ss_pred             Hhhhh---hcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH-
Q 010735          135 GAADK---IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK-  210 (502)
Q Consensus       135 ~~~~~---~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~-  210 (502)
                      .....   ....... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++. 
T Consensus       103 ~~~~~~~~~~~~~~~-~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~  181 (465)
T PRK15398        103 EKTPGVEDLTTEALT-GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNE  181 (465)
T ss_pred             HHhccccccccCccc-CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHH
Confidence            43311   1111111 122345788899999999999999999999999999999999999999999999999999876 


Q ss_pred             ---HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHH
Q 010735          211 ---LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA  287 (502)
Q Consensus       211 ---~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~a  287 (502)
                         ++|+|+|+++++++.+.+.++.|++||+||+|+||||+++|+.|++     ..+|+++|+|||||+||++|||++.|
T Consensus       182 ~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~A  256 (465)
T PRK15398        182 AIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKA  256 (465)
T ss_pred             HHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHH
Confidence               6899999999999866678899999999999999999999999987     25899999999999999999999999


Q ss_pred             HHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCE
Q 010735          288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT  367 (502)
Q Consensus       288 a~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~  367 (502)
                      ++.|++++|.|+||.|++++|||||+++||+|+++|+++.               +|+++..+++++.++++++.+++++
T Consensus       257 a~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~  321 (465)
T PRK15398        257 ARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNK  321 (465)
T ss_pred             HHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHhhcccccch
Confidence            9999999999999999999999999999999999998761               2689999999999999865545667


Q ss_pred             EEeCCccc---CCCCceE---ecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCc--eEEEecCCHHH
Q 010735          368 LLTGGKPI---GKKGYYI---EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL--AAGIMTKDLNV  439 (502)
Q Consensus       368 v~~gg~~~---~~~g~~~---~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~~v~t~d~~~  439 (502)
                      ++.||...   ...|.++   +|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||  ++||||+|.+.
T Consensus       322 ~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~  401 (465)
T PRK15398        322 KWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDN  401 (465)
T ss_pred             hhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHH
Confidence            77776421   1246665   4899999999999999999999999999999999999999999998  99999999999


Q ss_pred             HHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735          440 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI  496 (502)
Q Consensus       440 ~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~  496 (502)
                      ++++++++++|+|+||++..  +.+||||.|.|.+- .+|+.| ...|..|+++.+.
T Consensus       402 a~~~a~~l~~G~V~iN~~~~--~~~p~gg~~~s~~~-~~~~~g-~~~~~~~~~~~~~  454 (465)
T PRK15398        402 LNKMARAIQTSIFVKNGPSY--AGLGLGGEGFTTFT-IATPTG-EGVTSARTFTRRR  454 (465)
T ss_pred             HHHHHHhCCceEEEECCCCc--cccCcCCCCCceee-ecccCC-CCccchhhhhhhe
Confidence            99999999999999998753  67999999999852 237777 7777777776543


No 119
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=100.00  E-value=7e-75  Score=605.09  Aligned_cols=415  Identities=18%  Similarity=0.159  Sum_probs=361.1

Q ss_pred             CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHH
Q 010735           55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA  134 (502)
Q Consensus        55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~  134 (502)
                      ..+.+|+++++++|++||+  .|+.++.++|.++|++++++|++++++|++++++|+|||..+++..+.......+.+++
T Consensus         4 ~~~~~~v~~av~~A~~A~~--~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~   81 (488)
T TIGR02518         4 LYSIQQVRNLIRSAKVAQK--KLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSI   81 (488)
T ss_pred             ccCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence            4578899999999999999  89999999999999999999999999999999999999988754323334445555444


Q ss_pred             HhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHH----HHHHH
Q 010735          135 GAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF----AHLAK  210 (502)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l----~~~l~  210 (502)
                      ...+.. +. ...+.+...+.+++|+|||++|+|||||+.++.+++++||++||+||+|||+.+|.++..+    .+++.
T Consensus        82 ~~~~~~-G~-~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~  159 (488)
T TIGR02518        82 KDMKTI-GI-LSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAE  159 (488)
T ss_pred             hhCccc-ce-ecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHH
Confidence            432222 32 2222345567899999999999999999999999999999999999999999999999985    45558


Q ss_pred             HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHH
Q 010735          211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM  290 (502)
Q Consensus       211 ~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~  290 (502)
                      ++|+|+|++|++++.+.+.++.|+.||+||+|+||||+..++.+    . ..++|+++|+|||+|+||++|||++.|++.
T Consensus       160 eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a----~-~~~~pv~~e~gGn~p~iV~~dADld~Aa~~  234 (488)
T TIGR02518       160 EAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA----Y-SSGTPAIGVGPGNGPAYIERTANVKKAVRD  234 (488)
T ss_pred             HcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH----H-HcCCCEEEEcCCCCeEEEeCCCCHHHHHHH
Confidence            99999999999998777889999999999999999999966443    2 467999999999999999999999999999


Q ss_pred             HHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHH-------HhccccCCC-CCCCCcccccCCHHHHHHHHHHHHHHH
Q 010735          291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK-------AKAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGK  362 (502)
Q Consensus       291 iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~-------~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~  362 (502)
                      +++++|+|+||.|++.+|||||+++||+|+++|+++       .+.+++|+| .++++++||+++.++++++.+++++++
T Consensus       235 iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av  314 (488)
T TIGR02518       235 IIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTV  314 (488)
T ss_pred             HHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhcccc
Confidence            999999999999999999999999999999999998       889999996 678899999999999999999999999


Q ss_pred             HcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhc----CCCCceEEEecCCHH
Q 010735          363 REGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANN----TRYGLAAGIMTKDLN  438 (502)
Q Consensus       363 ~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~~v~t~d~~  438 (502)
                      .+|+++++||..              .+++++++ .+|.||||++|++|+|+||||+++|+    ++|||+++|||+|.+
T Consensus       315 ~~gakll~gg~~--------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~  379 (488)
T TIGR02518       315 PEDAKVLIGEQN--------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKD  379 (488)
T ss_pred             CCCCEEEEeCCC--------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHH
Confidence            999999999853              24677776 79999999999999999999999887    799999999999999


Q ss_pred             HHHHHHhhcceeEEEEcCcCC---------CCCCC--CcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735          439 VANTVSRSIRAGIIWINCYFA---------FDSDC--PYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI  496 (502)
Q Consensus       439 ~~~~~~~~l~~g~v~iN~~~~---------~~~~~--pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~  496 (502)
                      .++++++++++|+|+||++..         +.+..  -||+++.++++   .+-|++++++.|+|....
T Consensus       380 ~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~  445 (488)
T TIGR02518       380 IVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYGV  445 (488)
T ss_pred             HHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEecc
Confidence            999999999999999997542         22222  25666655555   388999999999998765


No 120
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=100.00  E-value=5.1e-76  Score=605.26  Aligned_cols=388  Identities=22%  Similarity=0.265  Sum_probs=341.2

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHh-------hccHHHHH
Q 010735           59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAK-------MGDIPGAA  127 (502)
Q Consensus        59 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~~~-------~~ev~~~~  127 (502)
                      +|++++++.|++||+  .|+.+|..+|.++|++++++|++|.++|++++++|+||+..    ++.       ..|+..++
T Consensus         4 ~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~   81 (417)
T PRK00197          4 EYLEELGRRAKAASR--KLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIA   81 (417)
T ss_pred             hHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHH
Confidence            689999999999999  89999999999999999999999999999999988877642    222       14788899


Q ss_pred             HHHHHHHHhhhhhcCeeeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHH
Q 010735          128 NTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY  204 (502)
Q Consensus       128 ~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~  204 (502)
                      +.+++++.+++.. +...+.   ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++.+
T Consensus        82 ~~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~  158 (417)
T PRK00197         82 EGLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRA  158 (417)
T ss_pred             HHHHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHH
Confidence            9999998776543 333222   22335788999999999999986 4 6788999999999999999999999999999


Q ss_pred             HHHHH----HHcCCCCceEEEecCCc-hhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEc
Q 010735          205 FAHLA----KLAGVPDGVLNVVPGFG-PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF  279 (502)
Q Consensus       205 l~~~l----~~aGlP~g~~~~v~g~~-~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~  279 (502)
                      +++++    .++|+|+|++|++++.+ ++.+..|..||++|+|+||||+.+|+.|++.+    ++|+++|+|||||+||+
T Consensus       159 l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~IV~  234 (417)
T PRK00197        159 LVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIYVD  234 (417)
T ss_pred             HHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEEEe
Confidence            98885    68999999999999643 45788888899999999999999999998864    59999999999999999


Q ss_pred             cCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 010735          280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE  359 (502)
Q Consensus       280 ~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~  359 (502)
                      +|||++.|++.+++++|.|+| .|++++|+|||+++||+|+++|++.+++++.+                          
T Consensus       235 ~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~--------------------------  287 (417)
T PRK00197        235 ESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE--------------------------  287 (417)
T ss_pred             CCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe--------------------------
Confidence            999999999999999999999 99999999999999999999999999987532                          


Q ss_pred             HHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 010735          360 HGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV  439 (502)
Q Consensus       360 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  439 (502)
                              ++ |+...  .+ |+ |||+   +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus       288 --------~~-~~~~~--~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~  351 (417)
T PRK00197        288 --------LR-GDEAA--LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAA  351 (417)
T ss_pred             --------Ee-cCHHH--HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHH
Confidence                    11 11110  12 23 9998   5689999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCC----CcchHHHHHhhhhccEEEEecCC
Q 010735          440 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFG----RDCGLESLHNYLQVKSVVTPIFN  498 (502)
Q Consensus       440 ~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g----~~~g~~~~~~~~~~k~v~~~~~~  498 (502)
                      ++++++++++|.|+||++....+..||||.|.||+|    +++|.+|+++|++.|+++++.++
T Consensus       352 ~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~~~  414 (417)
T PRK00197        352 AERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGDGQ  414 (417)
T ss_pred             HHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEECCCe
Confidence            999999999999999998776778899999999999    99999999999999999886654


No 121
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl  5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=100.00  E-value=5.4e-76  Score=603.10  Aligned_cols=381  Identities=21%  Similarity=0.248  Sum_probs=334.7

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHh-------hccHHHHHHHHH
Q 010735           63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAK-------MGDIPGAANTLR  131 (502)
Q Consensus        63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~~~-------~~ev~~~~~~l~  131 (502)
                      ..++.|++||+  .|+++|.++|.++|++++++|++++++|++++++|+||+..    ++.       ..|+..+++.++
T Consensus         2 ~~~~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~   79 (406)
T cd07079           2 ELAKRAKAASR--ALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLR   79 (406)
T ss_pred             hHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHH
Confidence            46889999999  89999999999999999999999999999999777666643    221       248889999999


Q ss_pred             HHHHhhhhhcCeeeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHH
Q 010735          132 YYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL  208 (502)
Q Consensus       132 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~  208 (502)
                      +++...+. .+...+.   ..+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|.++..++++
T Consensus        80 ~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~  156 (406)
T cd07079          80 QVAALPDP-VGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEI  156 (406)
T ss_pred             HHHhcCCC-CcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHH
Confidence            98876543 2332221   1233567899999999999996 55 67889999999999999999999999999999998


Q ss_pred             HH----HcCCCCceEEEecCCch-hHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCC
Q 010735          209 AK----LAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVD  283 (502)
Q Consensus       209 l~----~aGlP~g~~~~v~g~~~-~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dad  283 (502)
                      +.    ++|+|+|++|++++.+. +.++.|..||++|+|+||||+++|+.|++.+    ++|+++|+|||||+||++|||
T Consensus       157 ~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~IV~~dAD  232 (406)
T cd07079         157 IQEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVYVDESAD  232 (406)
T ss_pred             HHHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCC
Confidence            86    89999999999998543 6788899999999999999999999998775    699999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHH
Q 010735          284 VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR  363 (502)
Q Consensus       284 l~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~  363 (502)
                      ++.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++                                 
T Consensus       233 l~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~---------------------------------  278 (406)
T cd07079         233 LEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALREA---------------------------------  278 (406)
T ss_pred             HHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHC---------------------------------
Confidence            99999999999999999 99999999999999999999999887652                                 


Q ss_pred             cCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 010735          364 EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV  443 (502)
Q Consensus       364 ~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  443 (502)
                       |++++ +|...   ..|++||    ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++
T Consensus       279 -ga~~~-~g~~~---~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~  349 (406)
T cd07079         279 -GVELR-GDEET---LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERF  349 (406)
T ss_pred             -CCEEe-cCHHH---HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHH
Confidence             55654 33221   1377888    689999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcceeEEEEcCcCCCCCCCCcCCCCCCCC----CCcchHHHHHhhhhccEEEEe
Q 010735          444 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGF----GRDCGLESLHNYLQVKSVVTP  495 (502)
Q Consensus       444 ~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~----g~~~g~~~~~~~~~~k~v~~~  495 (502)
                      ++++++|.|+||++....+..||||.|.||+    |+++|.+++++|++.|++++.
T Consensus       350 ~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~~  405 (406)
T cd07079         350 LREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVRG  405 (406)
T ss_pred             HHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEeC
Confidence            9999999999999877667789999999998    899999999999999998753


No 122
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=100.00  E-value=4.9e-75  Score=596.76  Aligned_cols=409  Identities=23%  Similarity=0.271  Sum_probs=350.4

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHH-HHHHHHHhhhh
Q 010735           61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN-TLRYYAGAADK  139 (502)
Q Consensus        61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~-~l~~~~~~~~~  139 (502)
                      +++++++|++||+  .|+++|.++|.++|++++++|+++.++|++++++|+|||+.++...|+..+++ .+++++..  +
T Consensus         1 ~~~av~~A~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~   76 (436)
T cd07122           1 VDELVERARKAQR--EFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--K   76 (436)
T ss_pred             ChHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--c
Confidence            4789999999999  89999999999999999999999999999999999999999765447777777 77777652  2


Q ss_pred             hcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH----HcCCC
Q 010735          140 IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVP  215 (502)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~----~aGlP  215 (502)
                      ..+. .....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.    ++|+|
T Consensus        77 ~~g~-~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P  155 (436)
T cd07122          77 TVGV-IEEDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAP  155 (436)
T ss_pred             ceee-eccCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCC
Confidence            2222 111223456789999999999999999999999999999999999999999999999999888764    78999


Q ss_pred             CceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHH
Q 010735          216 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI  295 (502)
Q Consensus       216 ~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~  295 (502)
                      +|++|++++.+++.++.|++||+||.|.||||+++++.    ++ .+++|+++|+|||||+||++|||++.|++.+++++
T Consensus       156 ~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~~----a~-~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~  230 (436)
T cd07122         156 EGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVKA----AY-SSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSK  230 (436)
T ss_pred             chhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHHH----HH-hcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHh
Confidence            99999999877778999999999999999999997643    33 56899999999999999999999999999999999


Q ss_pred             hccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcc-------ccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHcCCE
Q 010735          296 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW-------VVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKREGAT  367 (502)
Q Consensus       296 ~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~-------~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~  367 (502)
                      |.|+||.|++++|||||+++||+|+++|+++...+       ++|++ .+.++.+||+++..+++++.+++..+..+|++
T Consensus       231 f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~  310 (436)
T cd07122         231 TFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTK  310 (436)
T ss_pred             hccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCe
Confidence            99999999999999999999999999999999887       88888 46778899999999998888887777677777


Q ss_pred             EEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcC----CCCceEEEecCCHHHHHHH
Q 010735          368 LLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNT----RYGLAAGIMTKDLNVANTV  443 (502)
Q Consensus       368 v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~~v~t~d~~~~~~~  443 (502)
                      ++.++              +.+++++|+++ +|.||||++|++|+|+||||+++|++    +|||++||||+|.++++++
T Consensus       311 vl~~~--------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~  375 (436)
T cd07122         311 VLVAE--------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEF  375 (436)
T ss_pred             EEEEe--------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHH
Confidence            76555              35778899987 56799999999999999999999997    8999999999999999999


Q ss_pred             HhhcceeEEEEcCcCCCC-CCCCcC--------CCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735          444 SRSIRAGIIWINCYFAFD-SDCPYG--------GYKMSGFGRDCGLESLHNYLQVKSVVT  494 (502)
Q Consensus       444 ~~~l~~g~v~iN~~~~~~-~~~pfg--------G~~~SG~g~~~g~~~~~~~~~~k~v~~  494 (502)
                      ++++++|.||||++..+. -+..++        |.|..|.+...+..+..+|++.++|.+
T Consensus       376 ~~~l~aG~V~IN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  435 (436)
T cd07122         376 ALRMPVSRILVNTPSSLGGIGDTYNGLAPSLTLGCGSWGGNSTSDNVGPKHLLNIKRVAY  435 (436)
T ss_pred             HhhCCceEEEEeCCccccccCccCCCCCceeeeeccccCCCcCCCCCChHHhheeEeecc
Confidence            999999999999876411 111111        223334445555678899999888754


No 123
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=100.00  E-value=3.5e-74  Score=622.17  Aligned_cols=383  Identities=21%  Similarity=0.230  Sum_probs=341.2

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHhC--CCHHHHh---hccHHHHH
Q 010735           59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLE------ALDAG--KLHSWAK---MGDIPGAA  127 (502)
Q Consensus        59 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~G--k~~~~~~---~~ev~~~~  127 (502)
                      +++++++++|++||+  .|+.+|..+|.++|++++++|+++.++|++++      ++|+|  ||+.++.   ..|+..++
T Consensus       294 ~~~~~~~~aA~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~  371 (718)
T PLN02418        294 VGAREMAVAARESSR--KLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLA  371 (718)
T ss_pred             HHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHH
Confidence            359999999999999  89999999999999999999999999999996      77999  8887643   45999999


Q ss_pred             HHHHHHHHhhhhhcCeeee---cccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHH
Q 010735          128 NTLRYYAGAADKIHGEVLK---MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY  204 (502)
Q Consensus       128 ~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~  204 (502)
                      +.+++++... +..+...+   ...+...++.++|+|||++|+||| |+..+ ++++|||++||+||+|||+.+|.++..
T Consensus       372 ~~~~~~a~~~-~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~  448 (718)
T PLN02418        372 ASIRQLADME-DPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAI  448 (718)
T ss_pred             HHHHHHhcCc-cccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHH
Confidence            9999999873 33343332   122333678899999999999999 99999 899999999999999999999999999


Q ss_pred             HHHHHHHcCCCCce----EEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEcc
Q 010735          205 FAHLAKLAGVPDGV----LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD  280 (502)
Q Consensus       205 l~~~l~~aGlP~g~----~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~  280 (502)
                      +++++.++ +|+|+    +|+|++ +.+++..|..||+||+|+||||+..+.   +.++ ..+||+++|+|||+|+||++
T Consensus       449 l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~i~---~~aa-~~~k~v~lELGGk~p~iV~~  522 (718)
T PLN02418        449 LHKVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKLVS---QIKA-STKIPVLGHADGICHVYVDK  522 (718)
T ss_pred             HHHHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHHHH---HHHH-hcCCCEEEeCCCcceEEEeC
Confidence            99999999 99995    999998 567899999999999999999996444   4444 56899999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 010735          281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH  360 (502)
Q Consensus       281 dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~  360 (502)
                      |||++.|++.+++++|.| ||.|++.+|+|||+++||+                        |         .+.++|++
T Consensus       523 DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~  568 (718)
T PLN02418        523 SADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLVA  568 (718)
T ss_pred             CCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------------c---------cHHHHHHH
Confidence            999999999999999999 9999999999999999987                        2         24789999


Q ss_pred             HHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 010735          361 GKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA  440 (502)
Q Consensus       361 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  440 (502)
                      |+++|+++ +||....  |      ++. + ++|++++||+|||+++|.+|+|+||||+++|+++|||+++|||+|.+++
T Consensus       569 a~~~Ga~l-~Gg~~~~--g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a  637 (718)
T PLN02418        569 LRSAGVTL-YGGPRAS--K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVA  637 (718)
T ss_pred             HHHCCCEE-ECCcccc--C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHH
Confidence            99999999 6886432  4      243 3 7899999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCC--CCcc--hHHHHHhhhhccEEEEecC
Q 010735          441 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGF--GRDC--GLESLHNYLQVKSVVTPIF  497 (502)
Q Consensus       441 ~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~--g~~~--g~~~~~~~~~~k~v~~~~~  497 (502)
                      +++++++++|.||||+++...+..||||+|.||+  ||++  |++|+++|++.|++++..+
T Consensus       638 ~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~g  698 (718)
T PLN02418        638 EIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGNG  698 (718)
T ss_pred             HHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECCC
Confidence            9999999999999999876677889999999999  9875  9999999999999977543


No 124
>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]
Probab=100.00  E-value=9.2e-75  Score=555.55  Aligned_cols=469  Identities=27%  Similarity=0.414  Sum_probs=428.8

Q ss_pred             ccceeEcCeEeeCCCCCeEEeecCCCCc-eEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH-H
Q 010735           21 FTKLFINGEFVDSVSGKTFETIDPRTGE-AIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE-E   98 (502)
Q Consensus        21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~-~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~-~   98 (502)
                      .+|..|||+.+.  +.....+.+|++.+ .++++..++..+++.||++|.+|++  .|..+|..+|.+|+++.++++. +
T Consensus        59 evP~vIg~~~v~--t~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~--~W~~~PiadR~aI~lkAAdlistk  134 (561)
T KOG2455|consen   59 EVPLVIGDKEVY--TNDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQK--TWELVPIADRLAIFLKAADLISTK  134 (561)
T ss_pred             eccEEECCeeee--cCCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcC--ccccCcHHHHHHHHHHHHHHhcch
Confidence            468899999998  45568999999955 7999999999999999999999999  8999999999999999999999 7


Q ss_pred             hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCC-eEEEEEcCCChhHHhh
Q 010735           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPI-GVVGHIIPWNFPTTMF  176 (502)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~~  176 (502)
                      ++-+|....+...||...++...-+.+.++++|+++..+.++....... ..+..+..+++|+ |.|++|+||||-....
T Consensus       135 yr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI~g  214 (561)
T KOG2455|consen  135 YRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAIGG  214 (561)
T ss_pred             HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeeecc
Confidence            7888999999999999997643336688899999999888776543332 4566788889998 9999999999999999


Q ss_pred             hhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735          177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ  256 (502)
Q Consensus       177 ~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~  256 (502)
                      ....+||| +||+|++|||..+.++++++.++|+|||+|+|++|+||++++.+++.+..+|++.++.||||..+-+.+.+
T Consensus       215 nLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk  293 (561)
T KOG2455|consen  215 NLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWK  293 (561)
T ss_pred             ccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHH
Confidence            99999999 59999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             HHh-----cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccc
Q 010735          257 AAA-----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV  331 (502)
Q Consensus       257 ~aa-----~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~  331 (502)
                      +.+     +....+++.|.||||.-+|+++||++.++...++++|.++||.|.+.+|+||+++.++.+.++|.+..++++
T Consensus       294 ~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~  373 (561)
T KOG2455|consen  294 KVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQLK  373 (561)
T ss_pred             HHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhcc
Confidence            765     335678999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHc-CCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEE
Q 010735          332 VGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM  409 (502)
Q Consensus       332 ~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~  409 (502)
                      +|+| .|.++.+||+|....++|++++|+.|+.. ..++++||+.++..|+|+.|||+...+|++++|.||+|||||+|+
T Consensus       374 igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVy  453 (561)
T KOG2455|consen  374 IGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVY  453 (561)
T ss_pred             cCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEE
Confidence            9997 78899999999999999999999999863 478999999999999999999999999999999999999999999


Q ss_pred             EeCC--HHHHHHHH-hcCCCCceEEEecCCHHHHHHHHhhcc--eeEEEEcCcCC--CCCCCCcCCCCCCCCCC-cchHH
Q 010735          410 KFKT--VEEAIKSA-NNTRYGLAAGIMTKDLNVANTVSRSIR--AGIIWINCYFA--FDSDCPYGGYKMSGFGR-DCGLE  481 (502)
Q Consensus       410 ~~~~--~~eai~~~-n~~~~gl~~~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~--~~~~~pfgG~~~SG~g~-~~g~~  481 (502)
                      .|+|  ++|+++++ |.++|||+.+||++|.+.+.+..+.|+  +|+.|||+..+  .....||||.+.||+.. .||++
T Consensus       454 vY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~  533 (561)
T KOG2455|consen  454 VYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPH  533 (561)
T ss_pred             EeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCce
Confidence            9975  89999999 559999999999999999999999885  89999999766  44789999999999885 88899


Q ss_pred             HHHhhhhccEEEE
Q 010735          482 SLHNYLQVKSVVT  494 (502)
Q Consensus       482 ~~~~~~~~k~v~~  494 (502)
                      -+.+|+.+.+|--
T Consensus       534 ~l~RwtSp~~ikE  546 (561)
T KOG2455|consen  534 YLLRWTSPLSIKE  546 (561)
T ss_pred             EEEeecCcchhhh
Confidence            9999999987743


No 125
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=100.00  E-value=8.5e-74  Score=636.77  Aligned_cols=425  Identities=21%  Similarity=0.254  Sum_probs=369.4

Q ss_pred             EEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHH
Q 010735           52 RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR  131 (502)
Q Consensus        52 ~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~  131 (502)
                      .+...+.+|+++++++|++||+  .|+++|.++|.++|++++++|+++.++|++++++|+|||..++...++..+.+.+.
T Consensus         5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~   82 (862)
T PRK13805          5 EMAVTNVAELDALVEKAKKAQE--EFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIY   82 (862)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH
Confidence            4567899999999999999999  89999999999999999999999999999999999999998765334444444444


Q ss_pred             HHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH-
Q 010735          132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK-  210 (502)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~-  210 (502)
                      ++.. .++..+. .........+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++. 
T Consensus        83 ~~~~-~~~~~g~-~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~  160 (862)
T PRK13805         83 NSYK-DEKTVGV-IEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLD  160 (862)
T ss_pred             HHhc-CCCcccc-cCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHH
Confidence            3332 1122221 111223456788999999999999999999999999999999999999999999999999888864 


Q ss_pred             ---HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHH
Q 010735          211 ---LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA  287 (502)
Q Consensus       211 ---~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~a  287 (502)
                         ++|+|+|++|++++.+.+.++.|+.|+++|.|+||||+.+++    .++ .+++|+++|+|||+|+||++|||++.|
T Consensus       161 ~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~----~a~-~~~~pv~~e~gGk~p~iV~~dADl~~A  235 (862)
T PRK13805        161 AAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVK----AAY-SSGKPALGVGAGNVPAYIDKTADIKRA  235 (862)
T ss_pred             HHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHH----HHH-hcCCCeEEECCCCCeEEEeCCCCHHHH
Confidence               689999999999987777899999999999999999999653    333 678999999999999999999999999


Q ss_pred             HHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCE
Q 010735          288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT  367 (502)
Q Consensus       288 a~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~  367 (502)
                      ++.|++++|+|+||.|+++++||||++++|+|+++|+++.               +|+++..+++++.++++++...|+.
T Consensus       236 a~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g---------------~~l~~~~~~~~v~~~i~~a~~~~~~  300 (862)
T PRK13805        236 VNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHG---------------AYFLNKKELKKLEKFIFGKENGALN  300 (862)
T ss_pred             HHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhC---------------CeeCCHHHHHHHHHHHhhccCCCcC
Confidence            9999999999999999999999999999999999998762               5899999999999999988765553


Q ss_pred             E-EeCCccc---CCCCceEecEE------EeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhc----CCCCceEEEe
Q 010735          368 L-LTGGKPI---GKKGYYIEPTI------FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANN----TRYGLAAGIM  433 (502)
Q Consensus       368 v-~~gg~~~---~~~g~~~~Ptv------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~~v~  433 (502)
                      . +.||...   ...|.|++||+      +.+++++|++++ |.||||++|++|+|+||||+++|+    ++|||+++||
T Consensus       301 ~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~  379 (862)
T PRK13805        301 ADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIY  379 (862)
T ss_pred             ccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEE
Confidence            2 4466421   12488889987      677889999887 799999999999999999999988    5899999999


Q ss_pred             cCCHHHHHHHHhhcceeEEEEcCcC----------CCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecCCCCCC
Q 010735          434 TKDLNVANTVSRSIRAGIIWINCYF----------AFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL  502 (502)
Q Consensus       434 t~d~~~~~~~~~~l~~g~v~iN~~~----------~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~~~~~  502 (502)
                      |+|.+.++++++++++|+|+||.+.          .+.+.+|||| |.||.|+++|+.|+++|++.|+|..+...+.||
T Consensus       380 t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~~~~~~~  457 (862)
T PRK13805        380 TNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRRENMQWF  457 (862)
T ss_pred             CCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeeccccceee
Confidence            9999999999999999999999975          3678999997 999999999999999999999999888877775


No 126
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=7.6e-73  Score=556.49  Aligned_cols=451  Identities=31%  Similarity=0.481  Sum_probs=409.7

Q ss_pred             eeEcCeEeeCCCCCeEEeecCCCC-ceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735           24 LFINGEFVDSVSGKTFETIDPRTG-EAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (502)
Q Consensus        24 ~~i~G~~~~~~~~~~~~v~~P~tg-~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (502)
                      -.++|+.+.  .+...+++||++. +++++|..++.+|+++|++.|.++++  .|..+|..+|+.+|++++++|+.+..+
T Consensus       116 p~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p--~W~atp~~eRAaiL~raAdlme~~m~~  191 (769)
T COG4230         116 PIVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAP--IWSATPPAERAAILERAADLMEAQMPQ  191 (769)
T ss_pred             cccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCc--ccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            367787775  5788999999994 58999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP  182 (502)
Q Consensus       103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~  182 (502)
                      |..++++|.||+... ...|+.+++++|+||+.+++.-.+           -...+|+|.|++|+|||||+.....+++.
T Consensus       192 L~~L~~REAGKtl~n-aIAEVREAVDFlrYYA~~ar~~~g-----------~~~~~~~G~vVcISPWNFPLAIFtGqiaA  259 (769)
T COG4230         192 LMGLLVREAGKTLSN-AIAEVREAVDFLRYYAGQARDTFG-----------NLTHRPLGPVVCISPWNFPLAIFTGQIAA  259 (769)
T ss_pred             HHHHHHHHhccchhh-HHHHHHHHHHHHHHHHHHHhcccC-----------ccccCCCCcEEEECCCCchHHHHHhHHHH
Confidence            999999999999995 578999999999999998765222           14567999999999999999999999999


Q ss_pred             HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735          183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN  262 (502)
Q Consensus       183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~  262 (502)
                      ||++||+|+-||.+++|+.+..-.+++.++|+|++++|+++|+++.++..|+.+++++.|+||||+++++.|.++.+.+.
T Consensus       260 AL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~  339 (769)
T COG4230         260 ALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQ  339 (769)
T ss_pred             HHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999987544


Q ss_pred             --CCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735          263 --LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV  340 (502)
Q Consensus       263 --~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~  340 (502)
                        ..|++.|.||-|.+||+.+|--|.++..++.|+|..+||+|.+.+.+++++++.|..++.|+-.+..+++|+|..-.+
T Consensus       340 g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~t  419 (769)
T COG4230         340 GRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTT  419 (769)
T ss_pred             CCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceec
Confidence              467999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeC--CHHHH
Q 010735          341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEA  417 (502)
Q Consensus       341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~--~~~ea  417 (502)
                      ++||+|+.++.+.+.++|+..+..|-.+..-..... .+|.|+.||++.- + +..-++.|+|||||-|++|+  ++++.
T Consensus       420 DVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El-~-~~~eL~rEVFGPVLHVvRy~~~~l~~v  497 (769)
T COG4230         420 DVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIEL-E-NLDELQREVFGPVLHVVRYKRDELDEV  497 (769)
T ss_pred             cccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEc-C-CHHHHHHHhccceeEEEEecHHHHHHH
Confidence            999999999999999999998888744332221111 3799999999953 2 23346899999999999996  69999


Q ss_pred             HHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCC-CcchHHHHHhhhhccEE
Q 010735          418 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSV  492 (502)
Q Consensus       418 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~k~v  492 (502)
                      |+-+|.++|||+.+|+|+-.+.+.++.+++++|++|||.-..  ...-.||||.|.||+| ..+|+..+..|+..+..
T Consensus       498 i~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p~  575 (769)
T COG4230         498 IDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERPW  575 (769)
T ss_pred             HHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCCc
Confidence            999999999999999999999999999999999999999754  4577899999999999 58899999999976553


No 127
>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00  E-value=1.2e-71  Score=517.21  Aligned_cols=468  Identities=26%  Similarity=0.475  Sum_probs=436.3

Q ss_pred             eEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 010735           25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA  104 (502)
Q Consensus        25 ~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  104 (502)
                      ..+|+|-.  ++..++.++|++.++|+++..++.+|.+.+++.|++|.+  .|...|...|.++.+++.+.|+...+.|.
T Consensus        23 vy~gkw~a--~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~k--iw~~vpapkrgeivrqigdalr~klq~lg   98 (507)
T KOG2453|consen   23 VYHGKWAA--SGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYK--IWCEVPAPKRGEIVRQIGDALRTKLQNLG   98 (507)
T ss_pred             eeeeeecc--CCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHH--HHhcCCCCccchHHHHHHHHHHHHHHHHh
Confidence            46678876  688999999999999999999999999999999999999  89999999999999999999999999999


Q ss_pred             HHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhHHHH
Q 010735          105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA  183 (502)
Q Consensus       105 ~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A  183 (502)
                      +++++|+||...| -.+|+++-++.++|.....+.+.+..+|.. ++.-....|.|+|+|.+|+.+|||....-|.-+.+
T Consensus        99 ~lvslemgkilae-gvgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaia  177 (507)
T KOG2453|consen   99 KLVSLEMGKILAE-GVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIA  177 (507)
T ss_pred             hhhhhhhhhHhhh-cchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhh
Confidence            9999999999996 478999999999999999998888887764 55666788999999999999999999999999999


Q ss_pred             HHcCCeEEEecCCCcHHHHHHH----HHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735          184 LAAGCTMIVKPAEQTPLIALYF----AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA  259 (502)
Q Consensus       184 LaaGN~vv~kps~~~~~~~~~l----~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa  259 (502)
                      +.+||+|++||.+.+|+++...    .+.|.+-.+|++.+....| +.+.++++..+.+++.+.||||+++++.+.+...
T Consensus       178 Mv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq~vq  256 (507)
T KOG2453|consen  178 MVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQ  256 (507)
T ss_pred             hhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHHHHH
Confidence            9999999999999998877654    5556666799999999998 6678999999999999999999999999988765


Q ss_pred             cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735          260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA  339 (502)
Q Consensus       260 ~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~  339 (502)
                       ....+..+|+||+|+.||.+|||+..++...++++...+||+|+..+|++||+++||+.+++|+...+++++|+|+|++
T Consensus       257 -arfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~n  335 (507)
T KOG2453|consen  257 -ARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSN  335 (507)
T ss_pred             -HHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCC
Confidence             4456889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735          340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK  419 (502)
Q Consensus       340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~  419 (502)
                      +.+||+.++++....+.-+++++..|.++++||+..+.+|+|+.|||++ ...|.+++.+|.|.|||.|.+|.+++||+.
T Consensus       336 tl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~a  414 (507)
T KOG2453|consen  336 TLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIA  414 (507)
T ss_pred             ceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhhe
Confidence            9999999999999999999999999999999999988899999999997 889999999999999999999999999999


Q ss_pred             HHhcCCCCceEEEecCCHHHHHHHHhhc--ceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735          420 SANNTRYGLAAGIMTKDLNVANTVSRSI--RAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI  496 (502)
Q Consensus       420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~  496 (502)
                      +-|..+.||++||||+|...+-++..-.  ++|.|.||-++. ..-+-.|||-|.+|.||+.|.+++++|+++.++++++
T Consensus       415 innev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsdswkqymrrstctiny  494 (507)
T KOG2453|consen  415 INNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINY  494 (507)
T ss_pred             eccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCchHHHHHHhhceeeeec
Confidence            9999999999999999999999988654  899999999875 3467799999999999999999999999999999999


Q ss_pred             CCCC
Q 010735          497 FNSP  500 (502)
Q Consensus       497 ~~~~  500 (502)
                      ++.+
T Consensus       495 skel  498 (507)
T KOG2453|consen  495 SKEL  498 (507)
T ss_pred             cccC
Confidence            8765


No 128
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of  endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an  important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase.  All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=100.00  E-value=1.7e-70  Score=563.17  Aligned_cols=373  Identities=19%  Similarity=0.168  Sum_probs=335.3

Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHh----------hccHHHHHHHHHHHHHh
Q 010735           67 AARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK----------MGDIPGAANTLRYYAGA  136 (502)
Q Consensus        67 ~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~----------~~ev~~~~~~l~~~~~~  136 (502)
                      +|++||+  .|+++|.++|.++|++++++|++++++|++++++|+|||+.+..          ..|+..+++.+++++..
T Consensus         2 ~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~   79 (397)
T cd07077           2 SAKNAQR--TLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITAS   79 (397)
T ss_pred             hHHHHHH--HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHh
Confidence            6889999  89999999999999999999999999999999999999975322          13788889999988876


Q ss_pred             hhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHc---C
Q 010735          137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA---G  213 (502)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~a---G  213 (502)
                      ..+..+...+.  ....+++++|+|||++|+|||||+. +++++++||++||+||+|||+.+|+++..+++++.++   |
T Consensus        80 ~~~~~~~~~~~--~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g  156 (397)
T cd07077          80 VGHIQDVLLPD--NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH  156 (397)
T ss_pred             cCcccceEecC--CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence            55444433222  2356899999999999999999999 9999999999999999999999999999999999887   9


Q ss_pred             CCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHH
Q 010735          214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL  293 (502)
Q Consensus       214 lP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~  293 (502)
                      +|+++++++++.+.+.+..|+.||++|.|+||||+.+++.+.+.+.   .+|+++|+||++|+||++|||++.|++.+++
T Consensus       157 ~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~---~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~  233 (397)
T cd07077         157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP---HIPVIGFGAGNSPVVVDETADEERASGSVHD  233 (397)
T ss_pred             CCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC---CCceEEecCCcceEEEcCCCCHHHHHHHHHH
Confidence            9999999999867778999999999999999999999999988752   6899999999999999999999999999999


Q ss_pred             HHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc
Q 010735          294 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK  373 (502)
Q Consensus       294 ~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~  373 (502)
                      ++|.| ||.|+++++||||+++||+|+++|+++++.                                  +|++++.|| 
T Consensus       234 ~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~-  277 (397)
T cd07077         234 SKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQET-  277 (397)
T ss_pred             hhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCc-
Confidence            99999 999999999999999999999999988764                                  466777666 


Q ss_pred             ccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHH----HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcce
Q 010735          374 PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE----EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA  449 (502)
Q Consensus       374 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~  449 (502)
                          .+.|+.||      ++|++.++|+||||++|++|+|++    +|++++|+++|||+++|||+|.+.++++++++++
T Consensus       278 ----~~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~  347 (397)
T cd07077         278 ----KPLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDT  347 (397)
T ss_pred             ----eeeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCE
Confidence                34677776      788999999999999999999986    6667889999999999999999999999999999


Q ss_pred             eEEEEcCcCCCC--CCCCcCCCC--CCCCCCcch-HHHHHhhhhccEEE
Q 010735          450 GIIWINCYFAFD--SDCPYGGYK--MSGFGRDCG-LESLHNYLQVKSVV  493 (502)
Q Consensus       450 g~v~iN~~~~~~--~~~pfgG~~--~SG~g~~~g-~~~~~~~~~~k~v~  493 (502)
                      |.|+||++....  ..+||||.+  .||+|+++| .+|+++|++.|++.
T Consensus       348 G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~  396 (397)
T cd07077         348 ASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV  396 (397)
T ss_pred             EEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence            999999987654  678999999  899999999 99999999999875


No 129
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of  NAD(P)+-dependent enzymes, in general, oxidize a wide range of  endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an  important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=100.00  E-value=1e-68  Score=546.64  Aligned_cols=363  Identities=51%  Similarity=0.816  Sum_probs=340.7

Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeee-
Q 010735           67 AARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-  145 (502)
Q Consensus        67 ~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-  145 (502)
                      +|+++++  .|+.++.++|.++|+++++.|.++.++|++++++|+|||+.+ ...|+..+++.+++++.+.+...+... 
T Consensus         2 ~a~~a~~--~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~-~~~ev~~~~~~l~~~~~~~~~~~~~~~~   78 (367)
T cd06534           2 AARAAFK--AWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEE-ALGEVARAIDTFRYAAGLADKLGGPELP   78 (367)
T ss_pred             hHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence            5788999  899999999999999999999999999999999999999995 567999999999999988766544222 


Q ss_pred             ecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCC
Q 010735          146 KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF  225 (502)
Q Consensus       146 ~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~  225 (502)
                      ....+...+.+++|+|||++|.|||+|+...++.+++||++||+||+|||+.+|.++..++++|.++|+|++++++++++
T Consensus        79 ~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~  158 (367)
T cd06534          79 SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGG  158 (367)
T ss_pred             ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcC
Confidence            22345667899999999999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             chhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCC
Q 010735          226 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA  305 (502)
Q Consensus       226 ~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s  305 (502)
                      +++..+.|..|+++|.|.||||+++++.|.+.++ ++++|+++|+||+|++||++|+|++.|++.+++++|.++||.|++
T Consensus       159 ~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~-~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s  237 (367)
T cd06534         159 GDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAA-ENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA  237 (367)
T ss_pred             chhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh-cCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence            7668899999999999999999999999999987 678999999999999999999999999999999999999999999


Q ss_pred             CcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecE
Q 010735          306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT  385 (502)
Q Consensus       306 ~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Pt  385 (502)
                      +++||||++++|+|+++|+                                                            |
T Consensus       238 ~~~v~v~~~~~~~f~~~l~------------------------------------------------------------t  257 (367)
T cd06534         238 ASRLLVHESIYDEFVEKLV------------------------------------------------------------T  257 (367)
T ss_pred             CcEEEEcHHHHHHHHHhhc------------------------------------------------------------e
Confidence            9999999999999999987                                                            6


Q ss_pred             EEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCC
Q 010735          386 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDC  464 (502)
Q Consensus       386 vl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~  464 (502)
                      |+.+++++++++++|+|||+++|++|++++||++++|++++||+++|||+|.+.++++++++++|.|+||+.+.. .+..
T Consensus       258 l~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~  337 (367)
T cd06534         258 VLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEA  337 (367)
T ss_pred             eeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence            777788899999999999999999999999999999999999999999999999999999999999999998876 7899


Q ss_pred             CcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          465 PYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       465 pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      ||||.|.||+|+++|++++++|++.|++.
T Consensus       338 pfgg~~~sG~g~~~g~~~~~~~~~~k~i~  366 (367)
T cd06534         338 PFGGVKNSGIGREGGPYGLEEYTRTKTVV  366 (367)
T ss_pred             CCCCcccCccCCCChHHHHHHhceEEEEe
Confidence            99999999999999999999999999874


No 130
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=100.00  E-value=2.2e-69  Score=549.40  Aligned_cols=375  Identities=19%  Similarity=0.181  Sum_probs=321.1

Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHhCCCH--HH---HhhccHHHHHHHHHHHHHh
Q 010735           68 ARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVL------EALDAGKLH--SW---AKMGDIPGAANTLRYYAGA  136 (502)
Q Consensus        68 A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~------~~~e~Gk~~--~~---~~~~ev~~~~~~l~~~~~~  136 (502)
                      |++||+  .|+++|.++|.++|++++++|++|.++|+++      +++|+|||.  .+   ....|+..+++.+++++..
T Consensus         1 a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~   78 (398)
T TIGR00407         1 AKQAAN--ILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIEL   78 (398)
T ss_pred             ChhHHH--HHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcC
Confidence            577888  8999999999999999999999999999999      899999994  21   1346899999999999988


Q ss_pred             hhhhcCeeeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHH----H
Q 010735          137 ADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----A  209 (502)
Q Consensus       137 ~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~----l  209 (502)
                      ++.. +...+.   ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..++++    |
T Consensus        79 a~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al  155 (398)
T TIGR00407        79 ADPV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDAL  155 (398)
T ss_pred             CCCC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHH
Confidence            7653 443322   23446788999999999999997 6 66888999999999999999999999999999999    5


Q ss_pred             HHcCCCCceEEEecCCc-hhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHH
Q 010735          210 KLAGVPDGVLNVVPGFG-PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAA  288 (502)
Q Consensus       210 ~~aGlP~g~~~~v~g~~-~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa  288 (502)
                      .++|+|+|++|++++.+ +++++.|..||+||+|+||||+.+++.+++.    ..+|+++|+|||||+||++|||++.|+
T Consensus       156 ~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~Aa  231 (398)
T TIGR00407       156 AQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKAI  231 (398)
T ss_pred             HHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHHH
Confidence            69999999999999744 4578889999999999999999999988765    358999999999999999999999999


Q ss_pred             HHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEE
Q 010735          289 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL  368 (502)
Q Consensus       289 ~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v  368 (502)
                      +.+++++|.+ ||.|++++|||||+++||+|+++|+++++++++        .+++      .+.+++++..        
T Consensus       232 ~~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~~--------  288 (398)
T TIGR00407       232 KVIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLEL--------  288 (398)
T ss_pred             HHHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHhc--------
Confidence            9999999965 999999999999999999999999999987643        1221      1334444321        


Q ss_pred             EeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcc
Q 010735          369 LTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR  448 (502)
Q Consensus       369 ~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~  448 (502)
                        ||           ||++   +.+|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++++++++++
T Consensus       289 --g~-----------~tv~---~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~  352 (398)
T TIGR00407       289 --GP-----------ATEA---IVCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVD  352 (398)
T ss_pred             --cC-----------cccc---ccccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCC
Confidence              11           3554   2337899999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEEEcCcCCCCCCCCcCCCCC----CCCCCcchHHHHHhhhhcc
Q 010735          449 AGIIWINCYFAFDSDCPYGGYKM----SGFGRDCGLESLHNYLQVK  490 (502)
Q Consensus       449 ~g~v~iN~~~~~~~~~pfgG~~~----SG~g~~~g~~~~~~~~~~k  490 (502)
                      +|.|+||+++...+..|||=-.+    ++..+.+|+.+++.|+..|
T Consensus       353 ~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~  398 (398)
T TIGR00407       353 SAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK  398 (398)
T ss_pred             eeEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence            99999999988777889972222    3456788999999999876


No 131
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=100.00  E-value=1e-68  Score=580.88  Aligned_cols=380  Identities=18%  Similarity=0.187  Sum_probs=326.3

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhc---------------cHH
Q 010735           60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG---------------DIP  124 (502)
Q Consensus        60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~---------------ev~  124 (502)
                      +++..+++|++||+  .|+.+|.++|.++|++++++|+++.++|+    .++||++.++...               |+.
T Consensus       287 ~~~~~~~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~  360 (715)
T TIGR01092       287 GERDMAVAARESSR--MLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKIS  360 (715)
T ss_pred             HHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHH
Confidence            48888999999999  89999999999999999999999999996    4778887754321               366


Q ss_pred             HHHHHHHHHHHhhhhhcCeeeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHH
Q 010735          125 GAANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI  201 (502)
Q Consensus       125 ~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~  201 (502)
                      .+++.+++++.. ....+...+.   ..+...+.+++|+|||++|+||| |+.. ++++++||++||+||+|||+.+|.+
T Consensus       361 ~~~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t  437 (715)
T TIGR01092       361 SLAISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARS  437 (715)
T ss_pred             HHHHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHH
Confidence            778888888763 3322332211   12333567899999999999999 9999 5899999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCc----eEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceE
Q 010735          202 ALYFAHLAKLAGVPDG----VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL  277 (502)
Q Consensus       202 ~~~l~~~l~~aGlP~g----~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~i  277 (502)
                      +..+++++.++ +|+|    +++++++ +++.++.|..|+++|+|+||||+.+|+.|++.++    +|+++|+|||+|+|
T Consensus       438 ~~~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~i  511 (715)
T TIGR01092       438 NAILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK----IPVLGHADGICHVY  511 (715)
T ss_pred             HHHHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC----CCEEEEcCCcceEE
Confidence            99999999999 9987    6899985 5667888999999999999999999999998852    99999999999999


Q ss_pred             EccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHH
Q 010735          278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY  357 (502)
Q Consensus       278 V~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~  357 (502)
                      |++|||++.|++.++.++|.+ ||.|++++|||||++++|+                         |        .+.++
T Consensus       512 V~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~  557 (715)
T TIGR01092       512 VDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------------------G--------LLDDL  557 (715)
T ss_pred             ECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc-------------------------h--------hHHHH
Confidence            999999999986666666554 9999999999999999984                         0        25677


Q ss_pred             HHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCH
Q 010735          358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL  437 (502)
Q Consensus       358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~  437 (502)
                      ++++.++|++++ ||....   .|+.     ..+++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.
T Consensus       558 v~~~~~~Ga~l~-Gg~~~~---~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~  628 (715)
T TIGR01092       558 IDMLRTEGVTIH-GGPRFA---AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDE  628 (715)
T ss_pred             HHHHHHCCCEEE-CCcchh---heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCH
Confidence            788888999985 775431   2432     1367899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCC----cchHHHHHhhhhccEEEEecC
Q 010735          438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGR----DCGLESLHNYLQVKSVVTPIF  497 (502)
Q Consensus       438 ~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~----~~g~~~~~~~~~~k~v~~~~~  497 (502)
                      +.++++++++++|.|+||++....+..||||+|.||+|+    ++|++++++|++.|+|.+..+
T Consensus       629 ~~a~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~g  692 (715)
T TIGR01092       629 NVAEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGKG  692 (715)
T ss_pred             HHHHHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECCC
Confidence            999999999999999999986666788999999999995    479999999999999987654


No 132
>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde  substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.
Probab=100.00  E-value=3.1e-34  Score=295.62  Aligned_cols=362  Identities=15%  Similarity=0.159  Sum_probs=256.3

Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH----HhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHH-
Q 010735           58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE----EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY-  132 (502)
Q Consensus        58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~----~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~-  132 (502)
                      ..++++.+...+...+  ....++.++..+++.++++.+.    ..+.+..+.+...+|.+... ....+......++. 
T Consensus         4 ~~~~~~~~~~l~~~~~--~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~-~~~a~~~l~~~~~r~   80 (422)
T cd07080           4 APDLDALIEELRLNRR--ALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEM-LREGLKRLMALFRRE   80 (422)
T ss_pred             HHHHHHHHHHHHhhHH--hHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHH-HHHHHHHHHHHcCHH
Confidence            3455666666655544  4667888888888888887775    23455666667777777552 23333333333321 


Q ss_pred             -HHHh-hhhhcC-eeee--cccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHH
Q 010735          133 -YAGA-ADKIHG-EVLK--MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH  207 (502)
Q Consensus       133 -~~~~-~~~~~~-~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~  207 (502)
                       .... .+++.. ..+.  ...+...+++++|+|||++|+|||+|+ ..++.+++||++||++|+|||+.+|.++..+.+
T Consensus        81 ~l~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~  159 (422)
T cd07080          81 NLERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLR  159 (422)
T ss_pred             HHHHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHH
Confidence             1111 111110 0110  112456688999999999999999999 789999999999999999999999999999999


Q ss_pred             HHHHcCCCC----ceEEEe--cCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCC-CceEEcc
Q 010735          208 LAKLAGVPD----GVLNVV--PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK-SPLLIFD  280 (502)
Q Consensus       208 ~l~~aGlP~----g~~~~v--~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~-~~~iV~~  280 (502)
                      +|.++ +|+    +.++++  +|.+.++++.|..++  |.|+||||+++++.|++.++ .+  +..+|+||| +++|+++
T Consensus       160 ~l~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~-~~--~~~Le~Ggk~s~~vi~~  233 (422)
T cd07080         160 SLADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLP-PG--CRLIDFGPKYSFAVIDR  233 (422)
T ss_pred             HHHhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCC-CC--CeeeecCCceeEEEecH
Confidence            99999 787    888888  454556888899887  89999999999999999876 43  569999999 5566666


Q ss_pred             CC----CHHHHHHHHHHHHhccCCCCcCCCcEEEEeccc---HHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHH
Q 010735          281 DV----DVNTAADMALLGILFNKGEICVASSRVYVQEGI---YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR  353 (502)
Q Consensus       281 da----dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i---~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~  353 (502)
                      ++    |++.+++.++++++.|+||.|.|+++||||+++   +++|.++|.++++++....|..      ++ +.+...+
T Consensus       234 ~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~------~~-~~~~~~~  306 (422)
T cd07080         234 EALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL------SL-SAAESAK  306 (422)
T ss_pred             HhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC------CC-CHHHHHH
Confidence            68    999999999999999999999999999999999   9999999999999875433321      11 3344444


Q ss_pred             HHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735          354 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM  433 (502)
Q Consensus       354 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~  433 (502)
                      +...-..+...+.+....+    +.++    ||+.+..+.  +. ....+-.+.|+++++++|++..++.  |--|+++|
T Consensus       307 ~~~~r~~~~~~~~~~~~~~----~~~~----~v~~~~~~~--~~-~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~  373 (422)
T cd07080         307 IARARLEAEFYELKGGVSR----DLGW----TVIISDEIG--LE-ASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLA  373 (422)
T ss_pred             HHHHHHHHHHHHHhcCCCC----CCCe----EEEEeCCCC--cc-CCCCcCEEEEEEcchHHHHHHhhhh--hcceeEee
Confidence            4443333333222211111    1222    344332222  11 1456678899999999999999986  66799999


Q ss_pred             cCCHHHHHHHHhhcc-ee
Q 010735          434 TKDLNVANTVSRSIR-AG  450 (502)
Q Consensus       434 t~d~~~~~~~~~~l~-~g  450 (502)
                      ..+.+. .++++.+. .|
T Consensus       374 ~~~~~~-~~~~~~l~~~G  390 (422)
T cd07080         374 PSPAEL-AELADALAAAG  390 (422)
T ss_pred             cChhhH-HHHHHHHHHcC
Confidence            988777 67777774 45


No 133
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00  E-value=3.5e-35  Score=283.79  Aligned_cols=386  Identities=19%  Similarity=0.241  Sum_probs=306.9

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh------CCCHHHHhh-----ccHHHHH
Q 010735           59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA------GKLHSWAKM-----GDIPGAA  127 (502)
Q Consensus        59 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~------Gk~~~~~~~-----~ev~~~~  127 (502)
                      .++.+..+.||+|..  .++.++.++|.+.|.++++.|+.+.++|.++..+|.      |.+-...-+     ..+...+
T Consensus         3 ~~~~~~~~~Ak~A~~--~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma   80 (417)
T COG0014           3 SELEELGKRAKAASR--KLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMA   80 (417)
T ss_pred             hHHHHHHHHHHHHHH--HHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHH
Confidence            357778889999988  799999999999999999999999999999877663      433221000     0233334


Q ss_pred             HHHHHHHHhhhhhcCeee---ecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHH
Q 010735          128 NTLRYYAGAADKIHGEVL---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY  204 (502)
Q Consensus       128 ~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~  204 (502)
                      +.++..+...+++ |+..   ..+.|.+.+..+.|+||+++|  |..-........+-||++||+||+|.+..+..+...
T Consensus        81 ~gl~~Va~L~DPv-Gev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~a  157 (417)
T COG0014          81 DGLRQVAALPDPV-GEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAA  157 (417)
T ss_pred             HHHHHHhcCCCch-HhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHH
Confidence            4444444444333 2211   124677888999999999999  888888888889999999999999999999999998


Q ss_pred             HHHHH----HHcCCCCceEEEecCCch-hHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEc
Q 010735          205 FAHLA----KLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF  279 (502)
Q Consensus       205 l~~~l----~~aGlP~g~~~~v~g~~~-~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~  279 (502)
                      +++++    .++|+|++.+|+++..+. .+.+.|.....+|.|+-.||...-+.+.+++    -.||+-.+-|++.++|+
T Consensus       158 i~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a----~vPVi~~~~G~CHiyvd  233 (417)
T COG0014         158 IVEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENA----TVPVIEHGVGNCHIYVD  233 (417)
T ss_pred             HHHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCC----cCCEEecCcceEEEEec
Confidence            87775    567999999999998544 4555666677799999999999999888875    38999999999999999


Q ss_pred             cCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 010735          280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE  359 (502)
Q Consensus       280 ~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~  359 (502)
                      ++||+|+|.+-++.++....+ .|++.+.++||+.+.++|+..|.+.+....+                           
T Consensus       234 ~~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~gv---------------------------  285 (417)
T COG0014         234 ESADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEAGV---------------------------  285 (417)
T ss_pred             ccCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhcCe---------------------------
Confidence            999999999999999999988 9999999999999999999999988874211                           


Q ss_pred             HHHHcCCEEEeCCcccCCCCceEecEEEee--CCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCH
Q 010735          360 HGKREGATLLTGGKPIGKKGYYIEPTIFTN--VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL  437 (502)
Q Consensus       360 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~--~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~  437 (502)
                             ++.......         .++.+  .+....-+..|...+++.|-.+++++|||+.+|....+|+-+|.|+|.
T Consensus       286 -------elr~d~~~~---------~~~~~~~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~  349 (417)
T COG0014         286 -------ELRGDAEAL---------ALLPDAVKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDY  349 (417)
T ss_pred             -------EEEcCHHHH---------HhccccCCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCH
Confidence                   111111000         00001  122333467899999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCC----CCCCCCcchHHHHHhhhhccEEEEecC
Q 010735          438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYK----MSGFGRDCGLESLHNYLQVKSVVTPIF  497 (502)
Q Consensus       438 ~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~----~SG~g~~~g~~~~~~~~~~k~v~~~~~  497 (502)
                      +.+++|.+.+++..||||.++.|..+.-||=-.    .+...+.+||-|++++|..|++....+
T Consensus       350 ~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G~G  413 (417)
T COG0014         350 ANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRGDG  413 (417)
T ss_pred             HHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeCCc
Confidence            999999999999999999999988777775222    234557889999999999999877654


No 134
>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=99.96  E-value=4.9e-27  Score=219.36  Aligned_cols=382  Identities=20%  Similarity=0.216  Sum_probs=291.5

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHhCCCHHHHhhc-----cHHHHHHH
Q 010735           61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLE------ALDAGKLHSWAKMG-----DIPGAANT  129 (502)
Q Consensus        61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~Gk~~~~~~~~-----ev~~~~~~  129 (502)
                      +++..+.||.+++  .++.++.++|.++|.+++++|..+..++.++.      +.++|....-..+.     .+.....-
T Consensus         2 ~e~~a~~aR~a~r--~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g   79 (433)
T KOG4165|consen    2 VEEMAENAREAGR--ILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAG   79 (433)
T ss_pred             HHHHHHHHHHHhh--HHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHH
Confidence            4566788999998  89999999999999999999998877776644      34555433311111     12222233


Q ss_pred             HHHHHHhhhhhcCeee---ecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHH
Q 010735          130 LRYYAGAADKIHGEVL---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA  206 (502)
Q Consensus       130 l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~  206 (502)
                      ++..+. .+...|+..   ....+...+....|+||.++|  |..-.-.+..-..-|+++||.+++|....+..+...|.
T Consensus        80 ~~~ia~-~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~  156 (433)
T KOG4165|consen   80 LRQIAE-LEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALH  156 (433)
T ss_pred             HHHHHh-cccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHH
Confidence            333333 111122221   123566677888899999999  77666666666778999999999999999999998888


Q ss_pred             HHHHHc----CCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCC
Q 010735          207 HLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV  282 (502)
Q Consensus       207 ~~l~~a----GlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~da  282 (502)
                      ++..++    |.|.+.+++|.. .+++.+.|..+..||+|+-.||+...+.|....    ..||..+-.|.+.++|++||
T Consensus       157 ~~v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~t----kIPVLGHA~GichvYvd~da  231 (433)
T KOG4165|consen  157 KLVQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTT----KIPVLGHAEGICHVYVDKDA  231 (433)
T ss_pred             HHHHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhcc----cCcccccccceeEEEecccc
Confidence            877655    678899999988 667888888888899999999999999987763    38999999999999999999


Q ss_pred             CHHHHHHHHHHHHhccCCCCcCCCcEEEEeccc-HHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 010735          283 DVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHG  361 (502)
Q Consensus       283 dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a  361 (502)
                      |+++|.+-+..+++.+.- .|++.+.+++|++. ...|.+.|...++                                 
T Consensus       232 d~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~---------------------------------  277 (433)
T KOG4165|consen  232 DLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLK---------------------------------  277 (433)
T ss_pred             CHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHH---------------------------------
Confidence            999999988899988875 89999999999984 2344444433332                                 


Q ss_pred             HHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 010735          362 KREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN  441 (502)
Q Consensus       362 ~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~  441 (502)
                       .+|.++.+|..... -..|        .++...-++.|.-.-.+++-.+++.++||+.+|..+.+++-+|.|+|.+.++
T Consensus       278 -~~gVtl~agpkl~~-~l~~--------~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae  347 (433)
T KOG4165|consen  278 -EEGVTLHAGPKLAA-LLKF--------SPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAE  347 (433)
T ss_pred             -hcCeEEecChhHHh-hcCc--------CCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHH
Confidence             24545544432211 1111        1445556778888888999999999999999999999999999999999999


Q ss_pred             HHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCC----CcchHHHHHhhhhccEEEEec
Q 010735          442 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFG----RDCGLESLHNYLQVKSVVTPI  496 (502)
Q Consensus       442 ~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g----~~~g~~~~~~~~~~k~v~~~~  496 (502)
                      +|.+.+++..|+.|..+.+..+.-||=-.+-|+.    +.+||-|++-++..|++....
T Consensus       348 ~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG~  406 (433)
T KOG4165|consen  348 HFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRGK  406 (433)
T ss_pred             HHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEecC
Confidence            9999999999999999999999889644444543    467999999999999876543


No 135
>PF05893 LuxC:  Acyl-CoA reductase (LuxC);  InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process
Probab=99.83  E-value=6.9e-17  Score=164.60  Aligned_cols=372  Identities=16%  Similarity=0.134  Sum_probs=237.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHH--Hhh-hhhcCeeeec---ccc
Q 010735           79 RFSGAERRGIMLKFADLIEEH--AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA--GAA-DKIHGEVLKM---SRA  150 (502)
Q Consensus        79 ~~~~~~R~~~L~~~a~~l~~~--~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~--~~~-~~~~~~~~~~---~~~  150 (502)
                      .+|.++..++|.++++.+...  .....+.+..-+|.+.... .. +......++.-.  ... .++ +.....   .+.
T Consensus         2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~-~~-l~~~~~~~~r~~L~~~l~~el-~~~~~Ld~~~~~   78 (399)
T PF05893_consen    2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMV-EY-LEALMRWFRRENLERKLEREL-GNPESLDGWVPR   78 (399)
T ss_pred             CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHH-HH-HHHHHHhcCHHHHHHHHHHhc-CCHhHhhccccc
Confidence            467777778888887777642  2225566666677766532 21 333222222110  000 111 111000   122


Q ss_pred             cccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCC----ceEEEe--cC
Q 010735          151 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD----GVLNVV--PG  224 (502)
Q Consensus       151 ~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~----g~~~~v--~g  224 (502)
                      ...+..+.|.|++++|.|.|.|+..+.. ++.+|++||..|+|+|...+.++..|.+.|.+. .|.    ..+.++  ++
T Consensus        79 ~~~~~~~~p~g~v~Hi~agNvp~~~~~S-~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~  156 (399)
T PF05893_consen   79 GDGYVRAFPRGLVFHIAAGNVPLVGFYS-LVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPG  156 (399)
T ss_pred             ccchhhccCCceEEEEcCCCccchHHHH-HHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecC
Confidence            3367889999999999999999976665 667888999999999999999999999999887 554    345566  44


Q ss_pred             CchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcC
Q 010735          225 FGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICV  304 (502)
Q Consensus       225 ~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~  304 (502)
                      .+.++.+.+..  ..|.|+.+||.++.+.|.+.+  +..++.+..+.-.+-.+|+.+++++.+++.+..-.+...+|.|.
T Consensus       157 ~d~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~--~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCs  232 (399)
T PF05893_consen  157 GDEELEEALSQ--QADAVVAWGGDETIRAIRQPL--PPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACS  232 (399)
T ss_pred             CchHHHHHHHH--HCCEEEEeCCHHHHHHHHHHc--CCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccC
Confidence            45566777764  478999999999999999854  45677777777778888999999999999999999999999999


Q ss_pred             CCcEEEEec---ccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHH-----HHHHcCCEEEeCCcccC
Q 010735          305 ASSRVYVQE---GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE-----HGKREGATLLTGGKPIG  376 (502)
Q Consensus       305 s~~~v~V~~---~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~-----~a~~~Ga~v~~gg~~~~  376 (502)
                      ||+.|||..   .-.++|.++|.+++++..---|...       .+......+....+     .+...+.++. ++.   
T Consensus       233 Sp~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~-------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~---  301 (399)
T PF05893_consen  233 SPQVIFVETGDGDSVEEFAERLAEALERAAERYPRGE-------LSIDEAAAISSLRAEAELRYALDGEYRVW-SSD---  301 (399)
T ss_pred             CCeEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCcC-------CCHHHHHHHHHHHHHHHHHHHhcCCccee-ecC---
Confidence            999999993   3367888888777765321112111       12222222222222     2333333444 221   


Q ss_pred             CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEEEc
Q 010735          377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWIN  455 (502)
Q Consensus       377 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN  455 (502)
                       .+.   -||+....+   ......++-++.|+++++++|++..++....=-|++++... ....++++.+ ..|.--|=
T Consensus       302 -~~~---~~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~Riv  373 (399)
T PF05893_consen  302 -DNS---WTVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGVDRIV  373 (399)
T ss_pred             -CCC---EEEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCCeeeC
Confidence             111   245543221   22334456689999999999999999987432477877544 4555566543 55633332


Q ss_pred             CcCCCCCCCCcCCCC--CCCCCCcchHHHHHhhhh
Q 010735          456 CYFAFDSDCPYGGYK--MSGFGRDCGLESLHNYLQ  488 (502)
Q Consensus       456 ~~~~~~~~~pfgG~~--~SG~g~~~g~~~~~~~~~  488 (502)
                      .         .|-+.  ..| +...|.+-+.+|++
T Consensus       374 ~---------~G~m~~~~~g-~~hDG~~~L~~lvR  398 (399)
T PF05893_consen  374 P---------LGQMLDFDPG-WPHDGMYPLRRLVR  398 (399)
T ss_pred             C---------CCcCCCCCCC-CCcCCHhHHHHHhC
Confidence            2         22111  111 23456777877765


No 136
>KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism]
Probab=99.54  E-value=1.4e-14  Score=119.48  Aligned_cols=146  Identities=28%  Similarity=0.372  Sum_probs=118.6

Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHH-HcCCEEEeCCcccCCCCceEecEEEeeCCCCC
Q 010735          316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGK-REGATLLTGGKPIGKKGYYIEPTIFTNVTEDM  394 (502)
Q Consensus       316 ~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~  394 (502)
                      ...+.+.|++..+.+++-+...+.+++     .....|+.++++.-. -.|-.+..-|.   .+|+|..||+|. ++|+|
T Consensus         8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLs-vtP~m   78 (157)
T KOG2449|consen    8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILS-VTPNM   78 (157)
T ss_pred             hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEE-ecCCc
Confidence            456677888888999988877778876     667788888887511 01222222222   378999999998 99999


Q ss_pred             cccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCC
Q 010735          395 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYK  470 (502)
Q Consensus       395 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~  470 (502)
                      .++.||+||||+....-.+++|+|.++|+++||....+||.+.+.++.+.+..++|.+.+|.+-. ..+...|.|-+
T Consensus        79 s~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~~  155 (157)
T KOG2449|consen   79 SCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGDR  155 (157)
T ss_pred             ceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceeccccC
Confidence            99999999999999999999999999999999999999999999999999999999999998643 34556665543


No 137
>PF07368 DUF1487:  Protein of unknown function (DUF1487);  InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster. The function of this family is unknown.
Probab=99.20  E-value=5.7e-10  Score=101.54  Aligned_cols=164  Identities=22%  Similarity=0.247  Sum_probs=124.3

Q ss_pred             ceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHH
Q 010735          275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI  354 (502)
Q Consensus       275 ~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~  354 (502)
                      -+||.+|.|++.|+..++.+.-.--|  ..+...|+|||++.|+|+++++.+++.+.      +.     +.+...+.|.
T Consensus         7 lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl~------~~-----va~Hpny~rs   73 (215)
T PF07368_consen    7 LMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPLS------PQ-----VANHPNYLRS   73 (215)
T ss_pred             EEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccCC------hh-----hccCcHHHHH
Confidence            37999999999999999998765544  56788899999999999999999987652      21     1223345554


Q ss_pred             HHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcC-CCCceEEEe
Q 010735          355 LSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNT-RYGLAAGIM  433 (502)
Q Consensus       355 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~gl~~~v~  433 (502)
                      .+.+   ..-+++.+.+....  .-..-.|.++.|.+..  .+-. --.+|+++..|++..||+++.+.. ...-++|||
T Consensus        74 l~~i---~~l~~~~I~~~~~~--~~~~aSPilV~d~~h~--~fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~SVsiW  145 (215)
T PF07368_consen   74 LKKI---KCLNAKTIVADFEN--VPPPASPILVCDFTHS--YFGD-GPTGVITLHTFRTPKEAIELCAKETLPFDSVSIW  145 (215)
T ss_pred             HHHH---HhcCCeEEEecccC--CCCCCCCEEEcCCCHH--HcCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcceEEEe
Confidence            4444   45788998884332  1233368888776543  1122 334899999999999999999974 223499999


Q ss_pred             cCCHHHHHHHHhhcceeEEEEcCcCC
Q 010735          434 TKDLNVANTVSRSIRAGIIWINCYFA  459 (502)
Q Consensus       434 t~d~~~~~~~~~~l~~g~v~iN~~~~  459 (502)
                      ++-.+.+.+++.++++..++||+...
T Consensus       146 ~ekla~~Yel~~~l~~~~f~iNC~~V  171 (215)
T PF07368_consen  146 NEKLASAYELAARLPCDTFYINCFNV  171 (215)
T ss_pred             CcHHHHHHHHHHhCCCCEEEEEeccC
Confidence            99999999999999999999999754


No 138
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=98.49  E-value=7.6e-07  Score=102.42  Aligned_cols=110  Identities=18%  Similarity=0.129  Sum_probs=86.3

Q ss_pred             eeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEec
Q 010735          144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP  223 (502)
Q Consensus       144 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~  223 (502)
                      .+|.++|..+..+..|+|++++|+|||   ..++.+++.||++||+||+||++.++.       .  .+.+|..+.+.+.
T Consensus      1063 ~LPGPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~--~~~Lp~~~~~~~~ 1130 (1208)
T PRK11905       1063 ELPGPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------A--LADLPGLVAARID 1130 (1208)
T ss_pred             cCCCCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------H--HHhCccccccccc
Confidence            466778999999999999999999999   557889999999999999999988652       1  1225665555542


Q ss_pred             CCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCC--CceEEec
Q 010735          224 GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL--KPVSLEL  270 (502)
Q Consensus       224 g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~--~~~~~e~  270 (502)
                           .+..+..+++++.|.|+|++++.+.|.++.+++.+  .|++.|.
T Consensus      1131 -----~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet 1174 (1208)
T PRK11905       1131 -----WTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAE 1174 (1208)
T ss_pred             -----cccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecC
Confidence                 33467778889999999999999999998885543  4444444


No 139
>PF00815 Histidinol_dh:  Histidinol dehydrogenase;  InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine. In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.
Probab=97.72  E-value=0.066  Score=54.50  Aligned_cols=262  Identities=22%  Similarity=0.207  Sum_probs=125.2

Q ss_pred             cccccceeecCCeEEEEEcCC-ChhHH-hhhhhHHHHHHcCCeEE--EecCCCcHHHHHHHHHHHHHcCCCCceEEEecC
Q 010735          149 RALQGYTLREPIGVVGHIIPW-NFPTT-MFFMKVSPALAAGCTMI--VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG  224 (502)
Q Consensus       149 ~~~~~~~~~~P~Gvv~~i~p~-n~P~~-~~~~~i~~ALaaGN~vv--~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g  224 (502)
                      +|.....++.|+--|++..|. .+|+. +++..++||-.+|..=|  .-|+...-.....+.-....+|+.+  +--+ |
T Consensus        96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e--vy~v-G  172 (412)
T PF00815_consen   96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE--VYKV-G  172 (412)
T ss_dssp             TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE--EEE---
T ss_pred             CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE--EEec-c
Confidence            566677889999999999993 34442 33555789999987644  4554442233344445556677643  2223 3


Q ss_pred             CchhHHHHHHh----CCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCC
Q 010735          225 FGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG  300 (502)
Q Consensus       225 ~~~~~~~~l~~----~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~G  300 (502)
                       |...-.+|.-    -|.||.|+=.|..-+..+=..... .-..- .+.++.---+|-|++||.+..+..++.-+=....
T Consensus       173 -GaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g-~V~ID-~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~~  249 (412)
T PF00815_consen  173 -GAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG-DVGID-MIAGPSEVLVIADETANPEFVAADLLAQAEHDPD  249 (412)
T ss_dssp             -HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH-S-EES-------EEEEEE-TTS-HHHHHHHHHHHHTT-TT
T ss_pred             -cHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC-CcccC-CCCCCCceEEEECCCCCHHHHHHHHHHHhccCCC
Confidence             4444444433    488999998888765543111111 11111 1111222234557789999998888865544432


Q ss_pred             CCcCCCcEEEEecc--cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCC
Q 010735          301 EICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK  378 (502)
Q Consensus       301 q~C~s~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~  378 (502)
                           .+-++|..+  ..++..+.+.++++.+.               ..+       .++.+..               
T Consensus       250 -----a~~vLvt~s~~la~~V~~~v~~~l~~l~---------------r~~-------i~~~sl~---------------  287 (412)
T PF00815_consen  250 -----AQAVLVTTSEELAEAVEAEVERQLEELP---------------RRE-------IAEKSLE---------------  287 (412)
T ss_dssp             ------EEEEEES-HHHHHHHHHHHHHHHTT-T---------------THH-------HHHHHHT---------------
T ss_pred             -----CceEEEECCHHHHHHHHHHHHHHHHhCC---------------chH-------HHHHHHH---------------
Confidence                 234555544  23444444444443321               111       1111111               


Q ss_pred             CceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEEEcCc
Q 010735          379 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWINCY  457 (502)
Q Consensus       379 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~~  457 (502)
                                             +|   .++.++|++||++++|..- .-...|.++|+   ..+..++ .+|.|++..+
T Consensus       288 -----------------------~g---~ii~~~~l~ea~~~~N~~A-PEHLel~~~~~---~~~~~~i~~AGaiFlG~~  337 (412)
T PF00815_consen  288 -----------------------NG---AIIVVDSLEEAIELANEYA-PEHLELQVEDP---EELLEKIRNAGAIFLGEY  337 (412)
T ss_dssp             -----------------------T----EEEE-SSHHHHHHHHHHH---SEEEEESTTH---HHHGGG--S-SEEEESTT
T ss_pred             -----------------------CC---eEEEECCHHHHHHHHHHhh-HHHHHHHHcCH---HHHHHHhhccChhhcCCC
Confidence                                   11   3556799999999999842 23678889887   4566777 5899999987


Q ss_pred             CC---------CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          458 FA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       458 ~~---------~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      +.         .+.-+|-     +|..|+.|.-+...|++..++.
T Consensus       338 tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~  377 (412)
T PF00815_consen  338 TPEALGDYAAGPNHVLPT-----GGTARFSSGLSVDDFLKRISVQ  377 (412)
T ss_dssp             --HHHHHHTSSS-----------TTGGGT---S-GGGGEEEEEEE
T ss_pred             CCHHHhhhccCCCccCCC-----CccccccCCCcHHHccceeeEE
Confidence            54         1122344     5567888888899999876654


No 140
>TIGR00069 hisD histidinol dehydrogenase. This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.
Probab=97.22  E-value=0.3  Score=49.39  Aligned_cols=266  Identities=20%  Similarity=0.195  Sum_probs=148.1

Q ss_pred             cccccceeecCCeEEEEEcCC-ChhH-HhhhhhHHHHHHcCCeEEE--ecCCC-cHHHHHHHHHHHHHcCCCCceEEEec
Q 010735          149 RALQGYTLREPIGVVGHIIPW-NFPT-TMFFMKVSPALAAGCTMIV--KPAEQ-TPLIALYFAHLAKLAGVPDGVLNVVP  223 (502)
Q Consensus       149 ~~~~~~~~~~P~Gvv~~i~p~-n~P~-~~~~~~i~~ALaaGN~vv~--kps~~-~~~~~~~l~~~l~~aGlP~g~~~~v~  223 (502)
                      +|.....++.|+--|++..|. .+|+ .+++...+||-.+|..=|+  -|+.. .......|+ ....+|+.+  +--+ 
T Consensus        78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e--Iy~v-  153 (393)
T TIGR00069        78 PGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLA-AAKLAGVDE--VYKV-  153 (393)
T ss_pred             CCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHH-HHHHcCCCe--ehhc-
Confidence            455667888999999999996 3333 2335557799999976543  44422 112222233 446666543  2112 


Q ss_pred             CCchhHHHHHH----hCCCcCEEEEcCCcHHHHHHHHHHhc-CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhcc
Q 010735          224 GFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAAT-SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN  298 (502)
Q Consensus       224 g~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~aa~-~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~  298 (502)
                      | |...-.+|.    .-|.||.|+=.|..-+..+  ++... .-..- .+.++.--.+|-|++||.+..+..++.-+=..
T Consensus       154 G-GAQAIAAlAyGTesIp~VDkIvGPGN~yV~~A--K~~v~g~V~ID-~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd  229 (393)
T TIGR00069       154 G-GAQAIAALAYGTETVPKVDKIVGPGNIYVTAA--KKLVFGDVGID-MPAGPSEVLVIADETANPEFVAADLLSQAEHD  229 (393)
T ss_pred             C-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhcCccCcC-CCCCCceEEEEeCCCCCHHHHHHHHHHHhccC
Confidence            2 333333332    3568999987777655442  22220 11111 11112222344567899999888887544333


Q ss_pred             CCCCcCCCcEEEEecc--cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC
Q 010735          299 KGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG  376 (502)
Q Consensus       299 ~Gq~C~s~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~  376 (502)
                      .    . .+.++|..+  +.++..+++.+++..+.                  ..    +..+.+..+            
T Consensus       230 ~----~-a~~iLvT~s~~la~~V~~~v~~ql~~l~------------------r~----~i~~~al~~------------  270 (393)
T TIGR00069       230 P----D-AQAILVTTSEELAEAVQEEIERQLATLP------------------RR----EIARKSLED------------  270 (393)
T ss_pred             C----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC------------------hH----HHHHHHHHh------------
Confidence            2    2 334555443  34555555555554431                  01    112222221            


Q ss_pred             CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEEEc
Q 010735          377 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWIN  455 (502)
Q Consensus       377 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN  455 (502)
                                               +|   .++.++|++||++++|..-. -..-|.++|+   ..+..++ .+|.|++.
T Consensus       271 -------------------------~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~p---~~~l~~I~nAGaiFlG  318 (393)
T TIGR00069       271 -------------------------NG---AIILVDDLEEAIEISNDYAP-EHLELQTKNP---EELLPKIRNAGSIFLG  318 (393)
T ss_pred             -------------------------CC---EEEEECCHHHHHHHHHhhCh-HhheehhCCH---HHHHhhcCccceeccC
Confidence                                     11   34567999999999998532 3456888886   3456666 58999998


Q ss_pred             CcCCC--CCCC--CcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          456 CYFAF--DSDC--PYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       456 ~~~~~--~~~~--pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      .++..  ..+.  |-.=...+|..|+.+.-+...|+++.++.
T Consensus       319 ~~tp~a~GDY~aG~NHvLPT~G~Ar~~sgL~v~~F~K~~s~~  360 (393)
T TIGR00069       319 PYTPEAAGDYAAGPNHVLPTGGTARFYSGLSVLDFLKRITVQ  360 (393)
T ss_pred             CCCchhhhhccCCCCcccCCCcceeecCCccHHHhccceeEE
Confidence            86541  1111  11113356678888888999999887654


No 141
>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=97.16  E-value=0.2  Score=50.69  Aligned_cols=267  Identities=20%  Similarity=0.243  Sum_probs=146.9

Q ss_pred             ccccccceeecCCeEEEEEcC---CChhHHhhhhhHHHHHHcCCeEE--EecCCCcHHHHHHHHHHHHHcCCCCceEEEe
Q 010735          148 SRALQGYTLREPIGVVGHIIP---WNFPTTMFFMKVSPALAAGCTMI--VKPAEQTPLIALYFAHLAKLAGVPDGVLNVV  222 (502)
Q Consensus       148 ~~~~~~~~~~~P~Gvv~~i~p---~n~P~~~~~~~i~~ALaaGN~vv--~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v  222 (502)
                      .+|.....++.|+--|++..|   .-||-..++. .+||-.+|+.=|  .-|.+..- .+..+.-....+|+.+  +--+
T Consensus       105 ~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~-avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e--Iy~v  180 (425)
T COG0141         105 EPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLMN-AVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE--VYKV  180 (425)
T ss_pred             cCCcEEEEEEEEhhheEEEccCCCcCChHHHHHh-hccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH--HHHc
Confidence            356667788999999999999   5666555554 678999998644  44554422 2222223334445332  1111


Q ss_pred             cCCchhHHHHHHhC----CCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCc-eEEccCCCHHHHHHHHHHHHhc
Q 010735          223 PGFGPTAGAAIASH----MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP-LLIFDDVDVNTAADMALLGILF  297 (502)
Q Consensus       223 ~g~~~~~~~~l~~~----~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~-~iV~~dadl~~aa~~iv~~~~~  297 (502)
                       | |.+...+|.-.    +.||.|+=.|..-+..+  |... ....-+=+..|-..- +|-|+++|.+..+..++.-+=.
T Consensus       181 -G-GAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA--Kr~v-~g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAEH  255 (425)
T COG0141         181 -G-GAQAIAALAYGTETVPKVDKIVGPGNAYVTAA--KRLV-SGVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAEH  255 (425)
T ss_pred             -c-CHHHHHHHHccCCcCCccCeeeCCCcHHHHHH--HHHh-hCCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhc
Confidence             2 44444555544    78999988887654432  2222 111111111122222 4446679999988887755433


Q ss_pred             cCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC
Q 010735          298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK  377 (502)
Q Consensus       298 ~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~  377 (502)
                      +.    . .+.|+|..+  ++|.++..+.+.+..-.-            .+  .+    .+..+..              
T Consensus       256 d~----~-a~aiLvT~s--~~la~~v~~~v~~~l~~l------------~~--~e----i~~~~l~--------------  296 (425)
T COG0141         256 DP----D-AQAILVTDS--EELAEAVEAAVERQLETL------------PR--AE----IARKALE--------------  296 (425)
T ss_pred             CC----C-ceEEEEeCc--HHHHHHHHHHHHHHHHhc------------cH--HH----HHHHHHH--------------
Confidence            32    2 344566554  455555544444311000            00  11    1121111              


Q ss_pred             CCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEEEcC
Q 010735          378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWINC  456 (502)
Q Consensus       378 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~  456 (502)
                                             -||   .|+-++|++||++++|..- .-..-|.++|+.   .+..++ ++|.|+++.
T Consensus       297 -----------------------~~g---~iilv~~l~ea~~~~N~~A-PEHLei~~~~p~---~~l~~I~nAGsIFlG~  346 (425)
T COG0141         297 -----------------------NYG---AIILVDDLDEAVEISNEYA-PEHLELQTENPR---ELLGKIRNAGSIFLGH  346 (425)
T ss_pred             -----------------------hCC---eEEEECCHHHHHHHHHhhC-hHhhhhhhcCHH---HHHHHhcccceeeecC
Confidence                                   111   4556799999999999853 245678888864   466666 579999999


Q ss_pred             cCCCC--CC--CCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735          457 YFAFD--SD--CPYGGYKMSGFGRDCGLESLHNYLQVKSV  492 (502)
Q Consensus       457 ~~~~~--~~--~pfgG~~~SG~g~~~g~~~~~~~~~~k~v  492 (502)
                      ++...  .+  .|-.=...+|+-|+.+.-++..|++.-++
T Consensus       347 ~sPe~~GDY~aG~NHVLPT~g~AR~~s~L~v~dF~K~~tv  386 (425)
T COG0141         347 YSPESLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSTV  386 (425)
T ss_pred             CCCccccccccCCCccCCCCccchhcCCccHHHhhhHHHH
Confidence            75421  10  01111234566677777788888776543


No 142
>PRK13770 histidinol dehydrogenase; Provisional
Probab=97.12  E-value=0.39  Score=48.90  Aligned_cols=266  Identities=16%  Similarity=0.194  Sum_probs=147.3

Q ss_pred             cccccceeecCCeEEEEEcCC-ChhHH-hhhhhHHHHHHcCCeEEE--ecCCCcHHHHHHHHHHHHHcCCCCceEEEecC
Q 010735          149 RALQGYTLREPIGVVGHIIPW-NFPTT-MFFMKVSPALAAGCTMIV--KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG  224 (502)
Q Consensus       149 ~~~~~~~~~~P~Gvv~~i~p~-n~P~~-~~~~~i~~ALaaGN~vv~--kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g  224 (502)
                      .+.....++.|+--|++..|. .+|+. +++...+||-.+|..=|+  -|++... ....+.-....+|+.+  +--+ |
T Consensus       100 ~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~-i~p~iL~Aa~~~Gv~e--Iy~i-G  175 (416)
T PRK13770        100 ESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNG-VSQEVLAACYITQVNQ--VFQV-G  175 (416)
T ss_pred             CCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCC-CCHHHHHHHHHcCCCe--eecc-C
Confidence            445556788899999999995 44442 335557899999987554  4443211 1222222345666543  2222 2


Q ss_pred             CchhHHHHHH----hCCCcCEEEEcCCcHHHHHHHHHHh-cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccC
Q 010735          225 FGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK  299 (502)
Q Consensus       225 ~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~aa-~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~  299 (502)
                       |...-.+|.    .-|.||.|+=.|..-+..+  |+.. ..-..- ...++.---+|-|++||.+..+..++.-+=...
T Consensus       176 -GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~g~V~ID-~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~  251 (416)
T PRK13770        176 -GAQSIAALTYGTETIPKVDKIVGPGNQFVAYA--KKYLFGQVGID-QIAGPTEIALIIDETADLDAIVYDVFAQAEHDE  251 (416)
T ss_pred             -CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhcCCcCcC-CCCCCceeEEEecCCCCHHHHHHHHHHHhccCC
Confidence             333333332    2568999987777654432  2211 011111 111222223445677999998888875443332


Q ss_pred             CCCcCCCcEEEEecc--cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC
Q 010735          300 GEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK  377 (502)
Q Consensus       300 Gq~C~s~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~  377 (502)
                          . .+.++|..+  +.++..+++.+++..+.                +  .    +.++.+..+             
T Consensus       252 ----~-a~~iLvT~s~~la~~V~~ev~~ql~~lp----------------r--~----~i~~~al~~-------------  291 (416)
T PRK13770        252 ----L-ARTYVISEDAQVLKDLESRIAKALPNVD----------------R--Y----DIVSKSIAN-------------  291 (416)
T ss_pred             ----C-CcEEEEeCCHHHHHHHHHHHHHHHHhCC----------------h--H----HHHHHHHHh-------------
Confidence                2 334555333  34555555555554431                0  0    112222211             


Q ss_pred             CCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEEEcC
Q 010735          378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWINC  456 (502)
Q Consensus       378 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~  456 (502)
                                              +|   .++-++|+|||++++|..-. -..-|.++|+   ..+..++ .+|.|++..
T Consensus       292 ------------------------~g---~ii~v~~~eeai~~~N~~AP-EHLel~~~~~---~~~l~~i~nAGaiFlG~  340 (416)
T PRK13770        292 ------------------------QH---YLIHASNFDEACHVMNTIAP-EHASIQTVNP---QPYIEKVKYVGALFIGH  340 (416)
T ss_pred             ------------------------CC---EEEEECCHHHHHHHHHhhCh-HhheehhCCH---HHHHhhCCEeceeccCC
Confidence                                    11   34567999999999998532 3456888887   4566666 579999987


Q ss_pred             cCC--CCCC--CCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          457 YFA--FDSD--CPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       457 ~~~--~~~~--~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      ++.  ...+  .|-.=...+|..|+.+.-+...|++..++.
T Consensus       341 ~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~  381 (416)
T PRK13770        341 YSPEVIGDYVAGPSHVLPTNRTARFTNGLSVNDFLTRNTVI  381 (416)
T ss_pred             CCchhhhccccCCCCcCCCCcceeccCCCcHHHeecceeeE
Confidence            654  1111  111113355677777778999999876654


No 143
>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
Probab=97.04  E-value=0.48  Score=48.48  Aligned_cols=263  Identities=23%  Similarity=0.247  Sum_probs=147.8

Q ss_pred             cccccceeecCCeEEEEEcCC---ChhHHhhhhhHHHHHHcCCeEE--EecCCCcHHHHHHHHHHHHHcCCCCceEEEec
Q 010735          149 RALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMI--VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP  223 (502)
Q Consensus       149 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~i~~ALaaGN~vv--~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~  223 (502)
                      +|.....++.|+--|++..|.   -||-.. +...+||-.+|..=|  .-|+.... ....+.-....+|+.+  +--+ 
T Consensus       110 ~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPp~~g~-i~p~vL~AA~~~Gv~e--Iy~v-  184 (425)
T PRK00877        110 PGVRLGQRWRPIERVGLYVPGGKAAYPSSV-LMNAIPAKVAGVKEIVMVTPPPDGE-INPAILAAAALAGVDE--VYKV-  184 (425)
T ss_pred             CCeEEEEEEEehHHeEEEccCCCCCchHHH-HHhhcchhhcCCCeEEEEeCCCCCC-CCHHHHHHHHHcCCCe--eecc-
Confidence            455566788899999999996   344433 555789999997654  44543111 2222333446666543  2222 


Q ss_pred             CCchhHHHHHH----hCCCcCEEEEcCCcHHHHHHHHHHhc-CCCCceEEecCCCCc--eEEccCCCHHHHHHHHHHHHh
Q 010735          224 GFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAAT-SNLKPVSLELGGKSP--LLIFDDVDVNTAADMALLGIL  296 (502)
Q Consensus       224 g~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~aa~-~~~~~~~~e~gG~~~--~iV~~dadl~~aa~~iv~~~~  296 (502)
                      | |...-.+|.    .-|.||.|+=.|..-+..+  ++... .-..-   -..|-+=  +|-|++||.+..+..++.-+=
T Consensus       185 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~g~V~ID---~~AGPSEvlViAD~~Anp~~vAaDLLaQAE  258 (425)
T PRK00877        185 G-GAQAIAALAYGTESIPKVDKIVGPGNIYVTAA--KRLVFGVVGID---MIAGPSEILVIADETADPDFVAADLLSQAE  258 (425)
T ss_pred             C-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHHcCCcCcC---CCCCCceeEEEeCCCCCHHHHHHHHHHHhc
Confidence            2 333334443    3468999988887654432  22210 11111   1123332  344667999998888876543


Q ss_pred             ccCCCCcCCCcEEEEecc--cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcc
Q 010735          297 FNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP  374 (502)
Q Consensus       297 ~~~Gq~C~s~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~  374 (502)
                      ...    . .+.++|..+  +.++..+++.+++..+.                +  .    +..+.+..+          
T Consensus       259 Hd~----~-a~aiLvT~s~~la~~V~~~v~~ql~~l~----------------r--~----~ia~~sl~~----------  301 (425)
T PRK00877        259 HDP----D-AQSILVTTSEELAEAVAAEVERQLATLP----------------R--A----EIARASLEG----------  301 (425)
T ss_pred             cCC----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC----------------h--H----HHHHHHHHh----------
Confidence            332    2 334555444  34444444444444321                0  0    111222211          


Q ss_pred             cCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEE
Q 010735          375 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIW  453 (502)
Q Consensus       375 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~  453 (502)
                                                 +|   .|+.++|+|||++++|..-. -...|.++|+.   .+..++ .+|.|+
T Consensus       302 ---------------------------~g---~iivv~~leeai~~~N~~AP-EHLel~~~~p~---~~l~~I~nAGaiF  347 (425)
T PRK00877        302 ---------------------------QG---AIILVDDLEEAIELSNAYAP-EHLEIQTEDPR---ALLDRIRNAGAIF  347 (425)
T ss_pred             ---------------------------CC---EEEEECCHHHHHHHHHhhCh-HheeehhCCHH---HHHhhcCccceec
Confidence                                       12   34567999999999998532 35668888874   455666 589999


Q ss_pred             EcCcCC--CCCC--CCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          454 INCYFA--FDSD--CPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       454 iN~~~~--~~~~--~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      +..++.  ...+  .|-.=...+|..|+.+.-+...|++.-++.
T Consensus       348 lG~~tp~a~GDY~aGpNHvLPT~G~AR~~sgLsV~~F~K~~s~~  391 (425)
T PRK00877        348 LGPYTPESLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSSVI  391 (425)
T ss_pred             cCCCCchhhhhcccCCCcccCCCcceeecCCccHHHhccceeEE
Confidence            988654  1111  111123456778888888999999886654


No 144
>PLN02926 histidinol dehydrogenase
Probab=96.98  E-value=0.55  Score=48.14  Aligned_cols=263  Identities=22%  Similarity=0.243  Sum_probs=146.3

Q ss_pred             cccccceeecCCeEEEEEcCC---ChhHHhhhhhHHHHHHcCCeEE--EecCCCc-HHHHHHHHHHHHHcCCCCceEEEe
Q 010735          149 RALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMI--VKPAEQT-PLIALYFAHLAKLAGVPDGVLNVV  222 (502)
Q Consensus       149 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~i~~ALaaGN~vv--~kps~~~-~~~~~~l~~~l~~aGlP~g~~~~v  222 (502)
                      +|.....++.|+.-|++..|.   -||-. ++..++||-.+|..=|  .-|+... ......|+ ..+.+|+.+  +--+
T Consensus       110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e--Iy~v  185 (431)
T PLN02926        110 PGVRCRRVARPIGAVGLYVPGGTAVLPST-ALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-CAKKAGVTH--ILKA  185 (431)
T ss_pred             CCeEEEEEEechHHeeEeccCCCCCccHH-HHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-HHHHcCCCe--eecc
Confidence            455566888999999999996   34443 3555789999987644  4454321 12223333 446666543  2212


Q ss_pred             cCCchhHHHHHH----hCCCcCEEEEcCCcHHHHHHHHHHhcCCCCc--eEEe-cCCCCc--eEEccCCCHHHHHHHHHH
Q 010735          223 PGFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKP--VSLE-LGGKSP--LLIFDDVDVNTAADMALL  293 (502)
Q Consensus       223 ~g~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~--~~~e-~gG~~~--~iV~~dadl~~aa~~iv~  293 (502)
                       | |.+.-.+|.    .-|.||.|+=.|..-+..+  ++.. . +.+  |-.. ..|-+=  +|-|++||.+.++..++.
T Consensus       186 -G-GaQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v-~-G~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLa  259 (431)
T PLN02926        186 -G-GAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAA--KMIL-Q-NSEAMVSIDMPAGPSEVLVIADKTANPVHVAADLLS  259 (431)
T ss_pred             -C-CHHHHHHHHcCCCCCCCCCEEECCCcHHHHHH--HHHh-h-CCCCccccCCCCCCceeEEEeCCCCCHHHHHHHHHH
Confidence             2 333333443    2468999988887655432  2211 0 110  1111 123332  444667999998888876


Q ss_pred             HHhccCCCCcCCCcEEEEecc--cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeC
Q 010735          294 GILFNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG  371 (502)
Q Consensus       294 ~~~~~~Gq~C~s~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~g  371 (502)
                      -+=...    . .+.++|..+  +.++..+++.++++.+.                +      .+..+.+...       
T Consensus       260 QAEHdp----~-a~aiLvT~s~~la~~V~~~v~~ql~~l~----------------r------~~i~~~sl~~-------  305 (431)
T PLN02926        260 QAEHGP----D-SQVVLVAVGDVDLDAIEEEVEKQCQSLP----------------R------GEIASKALGH-------  305 (431)
T ss_pred             HhccCC----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC----------------h------HHHHHHHHHC-------
Confidence            543332    2 334555444  23444444444444321                0      0111111111       


Q ss_pred             CcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-cee
Q 010735          372 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAG  450 (502)
Q Consensus       372 g~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g  450 (502)
                                                        -.|+.++|++||++++|..-. -...|.++|+   ..+..++ .+|
T Consensus       306 ----------------------------------g~iivv~~l~ea~~~~N~~AP-EHLei~~~~~---~~~l~~i~nAG  347 (431)
T PLN02926        306 ----------------------------------SFIVVARDMAEAISFSNLYAP-EHLIVNVEDA---ESWLDKIDNAG  347 (431)
T ss_pred             ----------------------------------CEEEEECCHHHHHHHHHhhCh-HhheehhcCH---HHHHhhcCccc
Confidence                                              134577999999999998432 3556888887   3456666 589


Q ss_pred             EEEEcCcCC--CCCC--CCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          451 IIWINCYFA--FDSD--CPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       451 ~v~iN~~~~--~~~~--~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      .|++..++.  ...+  -|-.=...+|.+|+.|.-+...|++.-++.
T Consensus       348 aiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~  394 (431)
T PLN02926        348 SVFLGRWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQ  394 (431)
T ss_pred             eeccCCCCchhhhccccCcCcccCCCcceeecCCCcHHHhcceeeEE
Confidence            999987643  1111  111112345677888888999999876653


No 145
>PRK13769 histidinol dehydrogenase; Provisional
Probab=96.78  E-value=0.71  Score=46.34  Aligned_cols=255  Identities=18%  Similarity=0.160  Sum_probs=138.7

Q ss_pred             cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchh
Q 010735          149 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPT  228 (502)
Q Consensus       149 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~  228 (502)
                      +|.....++.|+--|++..|.-||- +++...+||-.+|..=|+--+|-.......|+ ....+|..+  +--+ | |..
T Consensus        83 ~Gv~~g~~~~Pi~rvG~YVPa~~pS-tvLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL~-aa~~~Gv~e--Iy~v-G-GAQ  156 (368)
T PRK13769         83 GGVLRSVFWKPVRRAALYVPARYVS-TLVMLAVPARAAGVEEIYVVTPPRGVTGELLA-VAKELGVKG--VLAI-G-GPH  156 (368)
T ss_pred             CCeEEEEEEeeeeeeEEEeccchHH-HHHHhhccHhhcCCCeEEEeCCCCCCCHHHHH-HHHHcCCCe--eecc-c-CHH
Confidence            5555677889999999999965554 44556789999998755433221112222233 446666543  2222 2 333


Q ss_pred             HHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcE
Q 010735          229 AGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR  308 (502)
Q Consensus       229 ~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~  308 (502)
                      .-.++...-.||.|+=.|..-+..+  |+.. ....-+=+--|-..-+||-+++|.+..+..++.-+=...    . .+.
T Consensus       157 AIAa~a~gt~VDkIvGPGN~yV~~A--K~~v-~g~V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~----~-a~~  228 (368)
T PRK13769        157 GLAYAVFHMGVDMVAGPGGLYVQAA--KYVL-SQYVGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHGP----T-SFA  228 (368)
T ss_pred             HHHHHhcCCCcCEEECCCcHHHHHH--HHHH-hCCcCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcCC----C-CcE
Confidence            3345555557898887777654432  2211 111111111133333455556888877777664332221    2 344


Q ss_pred             EEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEe
Q 010735          309 VYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT  388 (502)
Q Consensus       309 v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~  388 (502)
                      ++|..+  +++.++..+.+++.                           +..     +           .|.        
T Consensus       229 iLvT~s--~~la~~V~~~v~~~---------------------------~~~-----~-----------~~~--------  255 (368)
T PRK13769        229 YLLSTD--AELLKAAEEIYRRE---------------------------RTS-----S-----------MGP--------  255 (368)
T ss_pred             EEEECC--HHHHHHHHHHHHHH---------------------------HHh-----c-----------CCC--------
Confidence            555554  35555554444320                           000     0           000        


Q ss_pred             eCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEEEcCcCCCCCCC--C
Q 010735          389 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWINCYFAFDSDC--P  465 (502)
Q Consensus       389 ~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~~~~~--p  465 (502)
                                       ..|+.++|++||++++|..-. -...|.+.+     .+..++ .+|.|+++.+.....+.  |
T Consensus       256 -----------------~~iivv~~leeai~~~N~~AP-EHLel~~~~-----~~~~~i~nAGsiFl~~p~a~GDY~aGp  312 (368)
T PRK13769        256 -----------------LEVRKVAGVEEAVRFIDEIAP-EHLEVWGRR-----EVAYRVRNVGAVSVNMPSPYLDYVAGI  312 (368)
T ss_pred             -----------------CeEEEECCHHHHHHHHHhhCh-HheEeeCcH-----HHHhhCCccCChhcCCchhhhccccCC
Confidence                             256788999999999998432 233444422     244566 58999996543322111  1


Q ss_pred             cCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          466 YGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       466 fgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      -.=...+|.+|+.|.-+...|+++-++.
T Consensus       313 NHvLPT~G~AR~~sgLsv~~FlK~~t~~  340 (368)
T PRK13769        313 SHVLPTGGTARWRGIITPLTFMKPIGVA  340 (368)
T ss_pred             CCcCCCCcceeccCCCcHHHcccceeEE
Confidence            1113355677888888899998876654


No 146
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=96.69  E-value=0.87  Score=46.24  Aligned_cols=291  Identities=22%  Similarity=0.196  Sum_probs=155.0

Q ss_pred             HHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCC-hhHH-hhhhhHHHHHHcCCeEE--EecCCCc
Q 010735          123 IPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWN-FPTT-MFFMKVSPALAAGCTMI--VKPAEQT  198 (502)
Q Consensus       123 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n-~P~~-~~~~~i~~ALaaGN~vv--~kps~~~  198 (502)
                      +..+.+.++.|.....+. .......+|.....++.|+--|++..|.- +|+. +++...+||-.+|..=|  .-|+...
T Consensus        57 i~~A~~nI~~fh~~q~~~-~~~~~~~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~  135 (390)
T cd06572          57 IELAAENIRAFHEAQLPK-DWEVETEPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKD  135 (390)
T ss_pred             HHHHHHHHHHHHHHhCCC-CeEEEeCCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCC
Confidence            444555555554433221 11111224666778899999999999964 4443 33555789999997654  4454321


Q ss_pred             HHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHH----hCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCC
Q 010735          199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS  274 (502)
Q Consensus       199 ~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~  274 (502)
                      ......+.-....+|..+  +--+ | |.....+|.    ..|.||.|+=.|..-+..+  ++.. ....- +=-..|-+
T Consensus       136 g~i~p~iL~aa~~~Gv~e--iy~v-G-GaQAIAAlAyGTesi~~VDkIvGPGN~yV~~A--K~~v-~g~V~-ID~~AGPS  207 (390)
T cd06572         136 GKINPAILAAAKLAGVDE--IYKV-G-GAQAIAALAYGTETIPKVDKIVGPGNIYVTAA--KRLV-SGDVG-IDMPAGPS  207 (390)
T ss_pred             CCCCHHHHHHHHHcCCcE--Eecc-C-CHHHHHHHHcCCcCCCCCCEeeCCchHHHHHH--HHHh-cCCcC-ccCCCCCc
Confidence            112222222345566443  2222 2 333334443    3678999987777655442  2222 11000 11112222


Q ss_pred             --ceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecc--cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHH
Q 010735          275 --PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQ  350 (502)
Q Consensus       275 --~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~  350 (502)
                        -+|-|++||.+..+..++.-+=..    -. .+.++|..+  +.++..+.+.++++.+.               ..  
T Consensus       208 EvlIiAD~~A~p~~vAaDLLaQAEH~----~~-a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------r~--  265 (390)
T cd06572         208 EVLVIADETANPEFVAADLLSQAEHD----PD-SQAILVTTSEELAEAVEEEVERQLAELP---------------RR--  265 (390)
T ss_pred             eEEEEeCCCCCHHHHHHHHHhhhccC----CC-CeEEEEECCHHHHHHHHHHHHHHHHhCC---------------cH--
Confidence              244566799999888877543322    12 334555444  23444444444444331               00  


Q ss_pred             HHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceE
Q 010735          351 FDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA  430 (502)
Q Consensus       351 ~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~  430 (502)
                       +    .++.+..+                                     +   -.++.++|++|+++++|..- .-..
T Consensus       266 -~----~~~~~~~~-------------------------------------~---g~ii~~~~~~eai~~~N~~A-PEHL  299 (390)
T cd06572         266 -E----IAAKSLLD-------------------------------------Y---GAIILVDDLEEAIELANEYA-PEHL  299 (390)
T ss_pred             -H----HHHHHHHh-------------------------------------C---CEEEEECCHHHHHHHHHhhc-hhhh
Confidence             0    11111110                                     1   13456799999999999853 2356


Q ss_pred             EEecCCHHHHHHHHhhc-ceeEEEEcCcCCC--CCC--CCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          431 GIMTKDLNVANTVSRSI-RAGIIWINCYFAF--DSD--CPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       431 ~v~t~d~~~~~~~~~~l-~~g~v~iN~~~~~--~~~--~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      -|.++|+..   +..++ .+|.|++..++..  ..+  -|-.=...+|..|+.+.-+...|+++-++.
T Consensus       300 el~~~~~~~---~l~~i~nAGsiFlG~~tp~a~GDY~aGpNHvLPT~G~Ar~~sgL~v~~F~K~~s~~  364 (390)
T cd06572         300 ELQTEDPEE---LLEKIRNAGSIFLGPYTPEALGDYAAGPNHVLPTGGTARFYSGLSVDDFLKRITVQ  364 (390)
T ss_pred             eeHhcCHHH---HHhhCccceEEeecCCCchhhhccccCCCCccCCCcceeecCCCCHHHheecceeE
Confidence            788888744   55666 5899999986541  111  111112345667777778889999876654


No 147
>PRK12447 histidinol dehydrogenase; Reviewed
Probab=96.67  E-value=0.94  Score=46.39  Aligned_cols=266  Identities=17%  Similarity=0.154  Sum_probs=147.6

Q ss_pred             cccccceeecCCeEEEEEcCC-ChhHH-hhhhhHHHHHHcCCeEE--EecCCCcHHHHHHHHHHHHHcCCCCceEEEecC
Q 010735          149 RALQGYTLREPIGVVGHIIPW-NFPTT-MFFMKVSPALAAGCTMI--VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG  224 (502)
Q Consensus       149 ~~~~~~~~~~P~Gvv~~i~p~-n~P~~-~~~~~i~~ALaaGN~vv--~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g  224 (502)
                      .|.....++.|+--|++..|. .+|+. +++...+||-.+|..=|  .-|+.........|+ ....+|+.+  +--+ |
T Consensus       105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e--Iy~v-G  180 (426)
T PRK12447        105 PGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHLAGADE--IYVL-G  180 (426)
T ss_pred             CCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCCe--ehhc-C
Confidence            455566788999999999995 44442 33556789999997654  344432112222333 445666543  1112 2


Q ss_pred             CchhHHHHHH----hCCCcCEEEEcCCcHHHHHHHHHHhc-CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccC
Q 010735          225 FGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAAT-SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK  299 (502)
Q Consensus       225 ~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~aa~-~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~  299 (502)
                       |...-.+|.    .-|.||.|+=.|..-+..+  ++... .-..- .+.++.---+|-|++||.+..+..++.-+=...
T Consensus       181 -GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~g~V~ID-~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~  256 (426)
T PRK12447        181 -GVQAVAAMAYGTETIKPVDMLVGPGNAYVAEA--KRQLFGRVGID-LFAGPTETLVIADDTADPELVATDLLGQAEHGP  256 (426)
T ss_pred             -CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhcCccCcC-CCCCCceeEEEeCCCCCHHHHHHHHHHHhccCC
Confidence             333333332    3468999988887665442  22110 11111 111122222445667999998888876543332


Q ss_pred             CCCcCCCcEEEEecc--cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC
Q 010735          300 GEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK  377 (502)
Q Consensus       300 Gq~C~s~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~  377 (502)
                          . .+.++|..+  +.++..+++.++++.+.                +  .    +..+.+..+             
T Consensus       257 ----~-a~~iLvT~s~~la~~V~~~v~~ql~~l~----------------r--~----~i~~~sl~~-------------  296 (426)
T PRK12447        257 ----N-SPAVLITTSRKLAEEVLAEIERLLAILP----------------T--A----DVASAAWRD-------------  296 (426)
T ss_pred             ----C-CceEEEECCHHHHHHHHHHHHHHHHhCC----------------H--H----HHHHHHHHh-------------
Confidence                2 334555443  34455555544444431                0  0    112222211             


Q ss_pred             CCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEEEcC
Q 010735          378 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWINC  456 (502)
Q Consensus       378 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~iN~  456 (502)
                                              +|   .|+-++|++||++++|..-. -...|.++|+   ..+..++ .+|.|++..
T Consensus       297 ------------------------~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~~---~~~l~~i~nAGaiFlG~  345 (426)
T PRK12447        297 ------------------------YG---EVILCDDLEEMVAEADRYAS-EHVQVMTEDP---DWFLENMTNYGALFLGE  345 (426)
T ss_pred             ------------------------CC---EEEEECCHHHHHHHHHhhCh-HheeehhCCH---HHHHhhcCccceeccCC
Confidence                                    11   34567999999999998532 3556888887   4566666 589999987


Q ss_pred             cCC--CCCC--CCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735          457 YFA--FDSD--CPYGGYKMSGFGRDCGLESLHNYLQVKSVV  493 (502)
Q Consensus       457 ~~~--~~~~--~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~  493 (502)
                      ++.  +..+  -|-.=...+|..|+.|.-+...|++.-++.
T Consensus       346 ~sp~a~GDY~aGpNHvLPT~G~Ar~~sgLsv~~FlK~~s~~  386 (426)
T PRK12447        346 RTNVAYGDKVIGTNHVLPTSGAARYTGGLWVGKFLKTVTYQ  386 (426)
T ss_pred             CCchhhhhcccCCCcccCCCcceeecCCCcHHHhccceeEE
Confidence            654  1111  111113456778888888999999876654


No 148
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=96.41  E-value=0.011  Score=68.88  Aligned_cols=104  Identities=16%  Similarity=0.091  Sum_probs=77.9

Q ss_pred             eeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEec
Q 010735          144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP  223 (502)
Q Consensus       144 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~  223 (502)
                      .+|.++|..+.....|.|+|+++.+..-   ..+.+++.+|++||.+|+..++..   ..    ++  +++|+.+.+.+.
T Consensus      1172 ~LPGPTGE~N~l~l~pRg~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~~---~~----~~--~~Lp~~v~~~v~ 1239 (1318)
T PRK11809       1172 LLPGPTGERNTYTLLPRERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDALH---RA----LV--AALPAAVQARIQ 1239 (1318)
T ss_pred             cCCCCCCCcceeeccCCCcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCchh---HH----HH--HhccHHHHhHhh
Confidence            4667789999999999999999987443   578899999999999988654432   11    11  458988877663


Q ss_pred             CCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCC
Q 010735          224 GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL  263 (502)
Q Consensus       224 g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~  263 (502)
                      -.    ........+++.|.|.|.....+.+.++.+++.+
T Consensus      1240 ~~----~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~G 1275 (1318)
T PRK11809       1240 LA----KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDG 1275 (1318)
T ss_pred             hc----cccccccCCccEEEEeCCHHHHHHHHHHHhcCCC
Confidence            21    1222234569999999999999999998885554


No 149
>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=85.00  E-value=0.13  Score=52.99  Aligned_cols=110  Identities=12%  Similarity=0.019  Sum_probs=81.5

Q ss_pred             CHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEE---EEEeCCHHHHHHHHhc
Q 010735          347 DKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA---LMKFKTVEEAIKSANN  423 (502)
Q Consensus       347 ~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~---v~~~~~~~eai~~~n~  423 (502)
                      +..++.+++..+.+.++++...+......+ .|.++.++...|++...++++  .|++..-   ........+.+.+.++
T Consensus        80 ~~~~R~~~L~~~Adlie~~~~~lA~~E~~d-~GKp~~~a~~~Dl~~~~~~~r--y~ag~ad~~~~~~~~~~~~~~~yt~~  156 (501)
T KOG2450|consen   80 DAAERGRLLRKLADLIEQDADVLAALEVLD-NGKPYPEALVSDLPPAIDCFR--YYAGWADKIHGSTIPTDGEFFAYTRR  156 (501)
T ss_pred             CHHHHHHHHHHHHHHHHhhhHHHhhhcccc-cCCcchhhhhcCchhhhhHHH--hhccchhhcccccCCCCCceEEEecC
Confidence            567888888888988888888887776654 788888888778887777665  4444332   2333456677788888


Q ss_pred             CCCC--ceEEEec-CCHHHHHHHHhhcceeEEEEcCcCC
Q 010735          424 TRYG--LAAGIMT-KDLNVANTVSRSIRAGIIWINCYFA  459 (502)
Q Consensus       424 ~~~g--l~~~v~t-~d~~~~~~~~~~l~~g~v~iN~~~~  459 (502)
                      .+.|  ...+.|. .=.-.+.+++-.|.+|+++||-+..
T Consensus       157 eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae  195 (501)
T KOG2450|consen  157 EPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAE  195 (501)
T ss_pred             CcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCC
Confidence            9999  5566665 3455677888999999999998765


No 150
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=83.71  E-value=11  Score=39.69  Aligned_cols=110  Identities=19%  Similarity=0.227  Sum_probs=72.3

Q ss_pred             eeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEec
Q 010735          144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP  223 (502)
Q Consensus       144 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~  223 (502)
                      .++.+.+..++....|.|-|+++.+   +....+.+++.+|++||.+++-+.....       .++.  .+|..+-..+.
T Consensus       628 ~LpGptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~a-------a~~~--~l~~~v~~~~~  695 (769)
T COG4230         628 LLPGPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGLA-------ALLK--DLPSAVASRIQ  695 (769)
T ss_pred             ecCCCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchHH-------HHHH--hchhhhhhhee
Confidence            3455678889999999999999855   5577788899999999999986654222       1111  24544322222


Q ss_pred             CCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecC
Q 010735          224 GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG  271 (502)
Q Consensus       224 g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~g  271 (502)
                      -.+    .+ ...-.++.+.|.|.+...+.+.+..+ ....|++.-.+
T Consensus       696 ~~~----~~-~~~~~~~~vl~~gd~~~~r~~~~~iA-~~~Gpiv~~~~  737 (769)
T COG4230         696 VAK----DW-TADIPFDAVLFHGDSDRLRALCEAIA-ARDGPIVSVQG  737 (769)
T ss_pred             ecc----ch-hhccceeeEEecCCHHHHHHHHHHHh-cCCCCeEEeec
Confidence            111    11 22335789999999999898888766 33345554433


No 151
>KOG2697 consensus Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=77.39  E-value=74  Score=30.99  Aligned_cols=168  Identities=24%  Similarity=0.293  Sum_probs=83.1

Q ss_pred             cccccceeecCCeEEEEEcCCChhH--HhhhhhHHHHHHcCCeEEEe--cCCCcHHHHHHHHHHHHHcCCCCceEEEecC
Q 010735          149 RALQGYTLREPIGVVGHIIPWNFPT--TMFFMKVSPALAAGCTMIVK--PAEQTPLIALYFAHLAKLAGVPDGVLNVVPG  224 (502)
Q Consensus       149 ~~~~~~~~~~P~Gvv~~i~p~n~P~--~~~~~~i~~ALaaGN~vv~k--ps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g  224 (502)
                      .|..+....+|+|-|+...|.---+  .+++..-+||-.+||.-|+-  |....--.+..+.-+..++|.-.  + ++.|
T Consensus       116 ~GV~C~R~sRpI~~VGLYiPGGTAvLPSTALMLgvPAqvAgCk~vV~atPprKDG~v~pEvvY~A~k~Ga~~--I-~lAG  192 (446)
T KOG2697|consen  116 KGVRCKRVSRPIGSVGLYIPGGTAVLPSTALMLGVPAQVAGCKTVVLATPPRKDGSVCPEVVYCAKKAGATH--I-LLAG  192 (446)
T ss_pred             CceeeeecCccccceeEEccCCceeccchHhhhcCcHhhcCCceEEEecCCCcCCccCcceeeehhhcChhh--e-eccc
Confidence            5566777778889888877753222  22333456888899976653  33333333333434444444322  1 1223


Q ss_pred             CchhHHHHH----HhCCCcCEEEEcCCcHHH--HHHHHHHhcCCCCceEEecC-CCCc--eEEccCCCHHHHHHHHHHHH
Q 010735          225 FGPTAGAAI----ASHMDIDKVSFTGSTDVG--RQVMQAAATSNLKPVSLELG-GKSP--LLIFDDVDVNTAADMALLGI  295 (502)
Q Consensus       225 ~~~~~~~~l----~~~~~v~~V~ftGs~~~g--~~i~~~aa~~~~~~~~~e~g-G~~~--~iV~~dadl~~aa~~iv~~~  295 (502)
                       |.+...++    -..|+++.|+=.|..-+-  +.+.+.   ....-|...+. |.+-  +|-+++||.+..+..++.-+
T Consensus       193 -GAQAiAAMAyGt~~~PKV~KIfGPGNQfVTAAKM~vQN---d~~AlvsIDmPAGPSEVLVIADE~a~p~~vA~DLLSQA  268 (446)
T KOG2697|consen  193 -GAQAIAAMAYGTDSCPKVEKIFGPGNQFVTAAKMIVQN---DYEALVSIDMPAGPSEVLVIADEHASPVYVAADLLSQA  268 (446)
T ss_pred             -cHHHHHHHHhccccCcchhhhcCCchhhhhhhhhheec---cccceEEeccCCCCceEEEEecCCCChHHHHHHHHhHh
Confidence             32222222    245777777666654322  111111   12233444443 3333  44467888888777776433


Q ss_pred             hccCCCCcCCCcEEEEecccHHHHHHHHHHHHh
Q 010735          296 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK  328 (502)
Q Consensus       296 ~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~  328 (502)
                      =.  |   .-.|.++|.-+.-.+.++++.+.+.
T Consensus       269 EH--G---~DSQviLv~V~lS~~~~~~Iq~ai~  296 (446)
T KOG2697|consen  269 EH--G---PDSQVILVVVGLSVDMLNAIQEAIA  296 (446)
T ss_pred             hc--C---CCceEEEEEecCCHHHHHHHHHHHH
Confidence            21  1   2234455544433444444444443


No 152
>COG1438 ArgR Arginine repressor [Transcription]
Probab=60.94  E-value=85  Score=27.50  Aligned_cols=45  Identities=18%  Similarity=0.118  Sum_probs=34.8

Q ss_pred             hhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCC
Q 010735          177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF  225 (502)
Q Consensus       177 ~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~  225 (502)
                      ...+...=-.||-+|+|..|-   .+..+++++...+.| +.+..+.|+
T Consensus        82 ~~~v~~vd~~~~~ivlkT~PG---~A~~ia~~lD~~~~~-eIlGTIaGd  126 (150)
T COG1438          82 KDLVLSIDRNGNLIVLKTSPG---AAQLIARLLDSLAKD-EILGTIAGD  126 (150)
T ss_pred             HHHheeeccCCcEEEEEeCCc---hHHHHHHHHHhcCch-hhheeeeCC
Confidence            344445556799999998864   678899999888787 888888874


No 153
>PF07287 DUF1446:  Protein of unknown function (DUF1446);  InterPro: IPR010839 This family consists of several bacterial and plant proteins of around 400 residues in length. The function of this family is unknown.
Probab=56.76  E-value=61  Score=32.94  Aligned_cols=103  Identities=18%  Similarity=0.144  Sum_probs=54.0

Q ss_pred             HHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHH---Hhcccc
Q 010735          256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK---AKAWVV  332 (502)
Q Consensus       256 ~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~---~~~~~~  332 (502)
                      ..+. +.+.|++...||-||.-          +..++.......|   .+.+.-+|+.+...+.+..+.+.   +..+..
T Consensus        65 ~~~~-~~gIkvI~NaGg~np~~----------~a~~v~eia~e~G---l~lkvA~V~gDd~~~~v~~~~~~g~~~~~l~~  130 (362)
T PF07287_consen   65 PAAA-EKGIKVITNAGGLNPAG----------CADIVREIARELG---LSLKVAVVYGDDLKDEVKELLAEGETIRPLDT  130 (362)
T ss_pred             HHHH-hCCCCEEEeCCCCCHHH----------HHHHHHHHHHhcC---CCeeEEEEECccchHhHHHHHhCCCCCccCCC
Confidence            3344 67899999999998832          3333334444456   33777788777544444333332   223333


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc
Q 010735          333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI  375 (502)
Q Consensus       333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~  375 (502)
                      |.++.+...  ..++...+--. .-|-+|++.||.|+..|..-
T Consensus       131 ~~~l~~~~~--~~~~a~aylGa-~pI~~AL~~GADIVI~GR~~  170 (362)
T PF07287_consen  131 GPPLSEWDD--RIVSANAYLGA-EPIVEALEAGADIVITGRVA  170 (362)
T ss_pred             CCCcchhcc--ccceEEEecCh-HHHHHHHHcCCCEEEeCccc
Confidence            333321000  01111111111 34456788899999888754


No 154
>PF07045 DUF1330:  Protein of unknown function (DUF1330);  InterPro: IPR010753 This family consists of several hypothetical bacterial proteins of around 90 residues in length. The function of this family is unknown.; PDB: 2FIU_B 3HHL_A 3DCA_D 3LO3_I.
Probab=55.70  E-value=45  Score=24.42  Aligned_cols=23  Identities=22%  Similarity=0.378  Sum_probs=19.7

Q ss_pred             ceEEEEEeCCHHHHHHHHhcCCC
Q 010735          404 PVMALMKFKTVEEAIKSANNTRY  426 (502)
Q Consensus       404 Pvl~v~~~~~~~eai~~~n~~~~  426 (502)
                      ..+.|+.|+|.+.|.++.|+..|
T Consensus        39 ~~~viieFPs~~aa~~~~~speY   61 (65)
T PF07045_consen   39 DRVVIIEFPSMEAAKAWYNSPEY   61 (65)
T ss_dssp             SEEEEEEESSHHHHHHHHCSHHH
T ss_pred             CeEEEEECCCHHHHHHHHCCHhH
Confidence            56799999999999999987554


No 155
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=53.35  E-value=43  Score=27.58  Aligned_cols=61  Identities=23%  Similarity=0.198  Sum_probs=40.4

Q ss_pred             HHHHHcCCCCceEEEecC-CchhHHHHHHhC-CCcCEEEEcCCcHH-------HHHHHHHHhcCCCCceEEe
Q 010735          207 HLAKLAGVPDGVLNVVPG-FGPTAGAAIASH-MDIDKVSFTGSTDV-------GRQVMQAAATSNLKPVSLE  269 (502)
Q Consensus       207 ~~l~~aGlP~g~~~~v~g-~~~~~~~~l~~~-~~v~~V~ftGs~~~-------g~~i~~~aa~~~~~~~~~e  269 (502)
                      +.|.+.|+|...+.-++. ..+++.+.+ .+ .++|+|++|-+...       +..|.+.|. ....|++..
T Consensus        36 ~~L~~~Gi~~~~v~~~~~~g~~~i~~~i-~~~g~idlVIn~~~~~~~~~~~~dg~~iRR~A~-~~~Ip~~T~  105 (112)
T cd00532          36 RVLADAGIPVRAVSKRHEDGEPTVDAAI-AEKGKFDVVINLRDPRRDRCTDEDGTALLRLAR-LYKIPVTTP  105 (112)
T ss_pred             HHHHHcCCceEEEEecCCCCCcHHHHHH-hCCCCEEEEEEcCCCCcccccCCChHHHHHHHH-HcCCCEEEC
Confidence            335568999777766654 234555555 45 68999999764333       777877776 667777654


No 156
>PF03795 YCII:  YCII-related domain;  InterPro: IPR005545 The majority of proteins in this group contain a single copy of this domain, though it is also found as a repeat (e.g. in Q9AJZ7 from SWISSPROT). A strongly conserved histidine and a aspartate suggest that the domain has an enzymatic function. This entry also covers what was previously known as the DGPF domain (COG3795). Although its function is unknown it is found fused to a sigma-70 factor family domain in Q9A8M4 from SWISSPROT, suggesting that this domain may plays a role in transcription initiation. This domain is named after the most conserved motif in the alignment.; PDB: 1S7I_A 1MWQ_A.
Probab=51.39  E-value=37  Score=26.70  Aligned_cols=60  Identities=22%  Similarity=0.367  Sum_probs=34.8

Q ss_pred             HHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCC
Q 010735          352 DRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYG  427 (502)
Q Consensus       352 ~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g  427 (502)
                      +....+++.....| .++.+|......|.+              .=..|..| -+.|+.++|.+||.+++.+.++-
T Consensus        22 ~~H~~~~~~l~~~G-~~~~~G~~~~~~g~~--------------~~~~~~~g-g~~i~~a~s~e~A~~~~~~dP~~   81 (95)
T PF03795_consen   22 PAHLAYLKELKEAG-VLVASGPFLDTDGPF--------------AETKEFIG-GFIIVEAESREEAEEIAKEDPFV   81 (95)
T ss_dssp             HHHHHHHHHHHHTT--EEEECEEECCCSSS--------------SGGCSEEE-EEEEEEESSHHHHHHHHCT-HHH
T ss_pred             HHHHHHHHHHHHCC-CEEeccCccCCCCCC--------------ccccccee-EEEEEEeCCHHHHHHHHHhCCcc
Confidence            34445566656667 555565432222211              11245555 35678999999999999987654


No 157
>PF03295 Pox_TAA1:  Poxvirus trans-activator protein A1 C-terminal;  InterPro: IPR004975 Late transcription factor VLTF-2, acts with RNA polymerase to initiate transcription from late gene promoters [].
Probab=49.68  E-value=31  Score=24.85  Aligned_cols=29  Identities=21%  Similarity=0.229  Sum_probs=24.9

Q ss_pred             ccccceeeceEEEEEeCCHHHHHHHHhcC
Q 010735          396 IAKNEIFGPVMALMKFKTVEEAIKSANNT  424 (502)
Q Consensus       396 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~  424 (502)
                      .++||.=--+|+++-|++.|+.++++|..
T Consensus         8 ALREEPKisLLPLv~Y~~Pe~Vi~iIN~l   36 (63)
T PF03295_consen    8 ALREEPKISLLPLVFYEDPEEVINIINEL   36 (63)
T ss_pred             eeccCCcceEEeeeeccCHHHHHHHHHHh
Confidence            35677777789999999999999999983


No 158
>COG0521 MoaB Molybdopterin biosynthesis enzymes [Coenzyme metabolism]
Probab=49.42  E-value=59  Score=29.09  Aligned_cols=51  Identities=24%  Similarity=0.227  Sum_probs=38.8

Q ss_pred             HHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHh--CCCcCEEEEcCCcH
Q 010735          199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS--HMDIDKVSFTGSTD  249 (502)
Q Consensus       199 ~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~--~~~v~~V~ftGs~~  249 (502)
                      -.+...+.+.|.++|.-.....+++.+...+...+..  ...+|.|..||++.
T Consensus        26 D~sG~~l~~~L~~ag~~~~~~~iV~D~~~~I~~~l~~~~~~~~DvvlttGGTG   78 (169)
T COG0521          26 DKSGPLLVELLEEAGHNVAAYTIVPDDKEQIRATLIALIDEDVDVVLTTGGTG   78 (169)
T ss_pred             ccchhHHHHHHHHcCCccceEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCcc
Confidence            3467889999999999888888898765555555544  22289999999986


No 159
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA.
Probab=46.45  E-value=30  Score=30.81  Aligned_cols=50  Identities=18%  Similarity=0.122  Sum_probs=36.6

Q ss_pred             HHHHHHHHHHcCCCCceEEEecCCchhHHHHHHh---CCCcCEEEEcCCcHHH
Q 010735          202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVG  251 (502)
Q Consensus       202 ~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~---~~~v~~V~ftGs~~~g  251 (502)
                      ...++..+.+.|.......+++.+..++.+.|.+   ..+.|.|+.||++..+
T Consensus        24 ~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVIttGGtg~g   76 (163)
T TIGR02667        24 GQYLVERLTEAGHRLADRAIVKDDIYQIRAQVSAWIADPDVQVILITGGTGFT   76 (163)
T ss_pred             HHHHHHHHHHCCCeEEEEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCcCCC
Confidence            4567788899998877777887755555666544   2468999999998744


No 160
>PRK05066 arginine repressor; Provisional
Probab=45.38  E-value=2.2e+02  Score=25.17  Aligned_cols=38  Identities=18%  Similarity=0.353  Sum_probs=31.7

Q ss_pred             HcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCC
Q 010735          185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF  225 (502)
Q Consensus       185 aaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~  225 (502)
                      ..+|-+|+|..|-.   +..++.++.+.++|++++..+.|+
T Consensus        91 ~~~~~ivIkT~pG~---A~~va~~iD~~~~~~~IlGTIAGd  128 (156)
T PRK05066         91 HNDALIVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGD  128 (156)
T ss_pred             ecCCEEEEEcCCCh---HHHHHHHHHcCCCCCCeEEEEecC
Confidence            47999999987654   677889999988999999999874


No 161
>PF14097 SpoVAE:  Stage V sporulation protein AE1
Probab=42.92  E-value=1.9e+02  Score=25.78  Aligned_cols=55  Identities=33%  Similarity=0.340  Sum_probs=37.6

Q ss_pred             CCeEEEecC-CCcHHHHHHHHHHHHHcCCCCceEEEec-------CCchhHHHHHHhCCCcCEE
Q 010735          187 GCTMIVKPA-EQTPLIALYFAHLAKLAGVPDGVLNVVP-------GFGPTAGAAIASHMDIDKV  242 (502)
Q Consensus       187 GN~vv~kps-~~~~~~~~~l~~~l~~aGlP~g~~~~v~-------g~~~~~~~~l~~~~~v~~V  242 (502)
                      |..||-..+ .-++++...+.+++.++-..| ++-++.       |.+++....+..||+|+.+
T Consensus        24 GgRCIS~S~GNPT~lsG~elV~lIk~a~~DP-V~VMfDD~G~~g~G~GE~Al~~v~~h~~IeVL   86 (180)
T PF14097_consen   24 GGRCISQSAGNPTPLSGEELVELIKQAPHDP-VLVMFDDKGFIGEGPGEQALEYVANHPDIEVL   86 (180)
T ss_pred             CcEEEeccCCCCCcCCHHHHHHHHHhCCCCC-EEEEEeCCCCCCCCccHHHHHHHHcCCCceEE
Confidence            555554332 347888999999999983332 333333       4577888999999998765


No 162
>PF13344 Hydrolase_6:  Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=42.72  E-value=63  Score=26.04  Aligned_cols=84  Identities=17%  Similarity=0.158  Sum_probs=53.9

Q ss_pred             CChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCc
Q 010735          169 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST  248 (502)
Q Consensus       169 ~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~  248 (502)
                      ++.|+..+...+-..-..|-.+++-.. .+..+...+.+-|...|++-..=++++. +..+...|.++...+.|.+.|+.
T Consensus        12 g~~~ipga~e~l~~L~~~g~~~~~lTN-ns~~s~~~~~~~L~~~Gi~~~~~~i~ts-~~~~~~~l~~~~~~~~v~vlG~~   89 (101)
T PF13344_consen   12 GNEPIPGAVEALDALRERGKPVVFLTN-NSSRSREEYAKKLKKLGIPVDEDEIITS-GMAAAEYLKEHKGGKKVYVLGSD   89 (101)
T ss_dssp             TTEE-TTHHHHHHHHHHTTSEEEEEES--SSS-HHHHHHHHHHTTTT--GGGEEEH-HHHHHHHHHHHTTSSEEEEES-H
T ss_pred             CCCcCcCHHHHHHHHHHcCCCEEEEeC-CCCCCHHHHHHHHHhcCcCCCcCEEECh-HHHHHHHHHhcCCCCEEEEEcCH
Confidence            666777776655555555666666444 3445556677777999998766666665 55677888876678899999998


Q ss_pred             HHHHHH
Q 010735          249 DVGRQV  254 (502)
Q Consensus       249 ~~g~~i  254 (502)
                      ..-..+
T Consensus        90 ~l~~~l   95 (101)
T PF13344_consen   90 GLREEL   95 (101)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            755444


No 163
>PF01513 NAD_kinase:  ATP-NAD kinase;  InterPro: IPR002504 Members of this family are ATP-NAD kinases 2.7.1.23 from EC. The enzymes catalyse the phosphorylation of NAD to NADP utilizing ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus.; GO: 0003951 NAD+ kinase activity, 0008152 metabolic process; PDB: 1U0T_B 1U0R_D 1Y3H_A 1Y3I_A 3AFO_B 1YT5_B 2AN1_A 2I2A_A 3V8P_A 2I1W_A ....
Probab=40.28  E-value=1.4e+02  Score=29.17  Aligned_cols=101  Identities=17%  Similarity=0.136  Sum_probs=65.5

Q ss_pred             EEEecC-CCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHH-----------------------------HHHhCCCc
Q 010735          190 MIVKPA-EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGA-----------------------------AIASHMDI  239 (502)
Q Consensus       190 vv~kps-~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~-----------------------------~l~~~~~v  239 (502)
                      +|.||. +.+...+..+.+.|.+..   +...++..   .+.+                             ......++
T Consensus         4 ii~np~~~~~~~~~~~~~~~L~~~~---~~~v~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (285)
T PF01513_consen    4 IIANPNKPEAIELANELARWLLEKQ---GIEVLVEG---SIAEDILEAIKKRYEVISVEKKLKTLDDTRNALEEMLEEGV   77 (285)
T ss_dssp             EEESSCGHCCCHHHHHHHHHHHHTT---TEEEEEEH---HHHHSHCCCSHSCCCCCTTSHCCCCTCEEEECCHHHHCCCS
T ss_pred             EEEcCCCHHHHHHHHHHHHHHHhCC---CEEEEECh---HHHHHHHHhccccccccccccccccccccchhhhhhcccCC
Confidence            567777 567777888888887772   32222221   1111                             11234679


Q ss_pred             CEEEEcCCcHHHHHHHHHHhcCCCCceEE-ecCCCCceEEccCCCHHHHHHHHHHHHhc
Q 010735          240 DKVSFTGSTDVGRQVMQAAATSNLKPVSL-ELGGKSPLLIFDDVDVNTAADMALLGILF  297 (502)
Q Consensus       240 ~~V~ftGs~~~g~~i~~~aa~~~~~~~~~-e~gG~~~~iV~~dadl~~aa~~iv~~~~~  297 (502)
                      |.|+.-|+..+...+.+... ...+|++. .+|-+..+-..+..+++.+++.++.+.+.
T Consensus        78 D~ii~lGGDGT~L~~~~~~~-~~~~Pilgin~G~lgfl~~~~~~~~~~~l~~~~~g~~~  135 (285)
T PF01513_consen   78 DLIIVLGGDGTFLRAARLFG-DYDIPILGINTGTLGFLTEFEPEDIEEALEKILAGEYS  135 (285)
T ss_dssp             SEEEEEESHHHHHHHHHHCT-TST-EEEEEESSSSTSSSSEEGCGHHHHHHHHHHTHCE
T ss_pred             CEEEEECCCHHHHHHHHHhc-cCCCcEEeecCCCccccccCCHHHHHHHHHHHhcCCeE
Confidence            99999999999999999876 45677765 44444443334567899999999886553


No 164
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=37.78  E-value=1.1e+02  Score=25.33  Aligned_cols=61  Identities=20%  Similarity=0.176  Sum_probs=39.7

Q ss_pred             HHHHH-cCCCCceEEEe--cCCchhHHHHHHhCCCcCEEEEcCC-------cHHHHHHHHHHhcCCCCceEEec
Q 010735          207 HLAKL-AGVPDGVLNVV--PGFGPTAGAAIASHMDIDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLEL  270 (502)
Q Consensus       207 ~~l~~-aGlP~g~~~~v--~g~~~~~~~~l~~~~~v~~V~ftGs-------~~~g~~i~~~aa~~~~~~~~~e~  270 (502)
                      +.|.+ .|++-..+ -+  .+..+++.+.+. +-.+++|++|-+       ...+..|.+.|. ....|++..+
T Consensus        38 ~~L~~~~Gi~v~~v-k~~~~~g~~~i~~~i~-~g~i~~VInt~~~~~~~~~~~dg~~iRr~a~-~~~Ip~~Ttl  108 (115)
T cd01422          38 LLIQEATGLTVNRM-KSGPLGGDQQIGALIA-EGEIDAVIFFRDPLTAQPHEPDVKALLRLCD-VYNIPLATNR  108 (115)
T ss_pred             HHHHHhhCCcEEEE-ecCCCCchhHHHHHHH-cCceeEEEEcCCCCCCCcccccHHHHHHHHH-HcCCCEEEcH
Confidence            44555 68886655 33  332455666665 557999999965       335788888877 6677776543


No 165
>PRK12865 YciI-like protein; Reviewed
Probab=36.09  E-value=2.2e+02  Score=22.63  Aligned_cols=24  Identities=25%  Similarity=0.282  Sum_probs=20.3

Q ss_pred             eEEEEEeCCHHHHHHHHhcCCCCc
Q 010735          405 VMALMKFKTVEEAIKSANNTRYGL  428 (502)
Q Consensus       405 vl~v~~~~~~~eai~~~n~~~~gl  428 (502)
                      -+.|+..+|.+||.+++.+-+|-.
T Consensus        53 ~~~i~~a~s~e~a~~~~~~DP~~~   76 (97)
T PRK12865         53 SLVIVKAETKEAAKALADADPYAK   76 (97)
T ss_pred             EEEEEEcCCHHHHHHHHHcCCchh
Confidence            467889999999999999987753


No 166
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=36.05  E-value=1.2e+02  Score=24.71  Aligned_cols=61  Identities=26%  Similarity=0.182  Sum_probs=41.3

Q ss_pred             HHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcH----HHHHHHHHHhcCCCCceEEe
Q 010735          207 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD----VGRQVMQAAATSNLKPVSLE  269 (502)
Q Consensus       207 ~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~----~g~~i~~~aa~~~~~~~~~e  269 (502)
                      +.|.+.|++...+..+++..+++.+.+. +.+++.|+.+=+..    .+..+.+.|. ....|++.+
T Consensus        37 ~~l~~~gi~~~~v~~~~~~~~~i~~~i~-~~~id~vIn~~~~~~~~~~~~~iRR~Av-~~~ipl~T~  101 (110)
T cd01424          37 KYLQEAGIPVEVVNKVSEGRPNIVDLIK-NGEIQLVINTPSGKRAIRDGFSIRRAAL-EYKVPYFTT  101 (110)
T ss_pred             HHHHHcCCeEEEEeecCCCchhHHHHHH-cCCeEEEEECCCCCccCccHHHHHHHHH-HhCCCEEec
Confidence            4456678987777777654555555554 56899998864332    3677878777 677888754


No 167
>PF06945 DUF1289:  Protein of unknown function (DUF1289);  InterPro: IPR010710 This family consists of a number of hypothetical bacterial proteins. The aligned region spans around 56 residues and contains 4 highly conserved cysteine residues towards the N terminus. The function of this family is unknown.
Probab=35.48  E-value=34  Score=23.90  Aligned_cols=21  Identities=29%  Similarity=0.550  Sum_probs=18.5

Q ss_pred             CCCCCCHHHHHHHHHHHHHHH
Q 010735           76 PWPRFSGAERRGIMLKFADLI   96 (502)
Q Consensus        76 ~w~~~~~~~R~~~L~~~a~~l   96 (502)
                      .|..++.++|.+++.++...+
T Consensus        29 ~W~~~s~~er~~i~~~l~~R~   49 (51)
T PF06945_consen   29 DWKSMSDDERRAILARLRARR   49 (51)
T ss_pred             HHhhCCHHHHHHHHHHHHHHh
Confidence            499999999999999987754


No 168
>COG3795 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.38  E-value=2.7e+02  Score=23.43  Aligned_cols=29  Identities=14%  Similarity=0.276  Sum_probs=23.0

Q ss_pred             ccceeeceEEEEEeCCHHHHHHHHhcCCCC
Q 010735          398 KNEIFGPVMALMKFKTVEEAIKSANNTRYG  427 (502)
Q Consensus       398 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~g  427 (502)
                      ..|.++- +.++.++|+|||++++...+..
T Consensus        74 tKEql~G-f~vie~~dLdeA~e~A~~~P~~  102 (123)
T COG3795          74 TKEQLAG-FYVIEVRDLDEALEWAARCPLA  102 (123)
T ss_pred             HHHHhCc-EEEEEeCCHHHHHHHHhcCCCC
Confidence            4576664 5788999999999999987743


No 169
>COG5470 Uncharacterized conserved protein [Function unknown]
Probab=33.35  E-value=1.2e+02  Score=24.16  Aligned_cols=22  Identities=23%  Similarity=0.412  Sum_probs=18.7

Q ss_pred             EEEEEeCCHHHHHHHHhcCCCC
Q 010735          406 MALMKFKTVEEAIKSANNTRYG  427 (502)
Q Consensus       406 l~v~~~~~~~eai~~~n~~~~g  427 (502)
                      +.|+.|+|.+.|.++-|+.+|.
T Consensus        55 ~vviEFps~~~ar~~y~SpeYq   76 (96)
T COG5470          55 NVVIEFPSLEAARDCYNSPEYQ   76 (96)
T ss_pred             EEEEEcCCHHHHHHHhcCHHHH
Confidence            5788999999999998887664


No 170
>PF13376 OmdA:  Bacteriocin-protection, YdeI or OmpD-Associated
Probab=32.11  E-value=70  Score=23.29  Aligned_cols=35  Identities=20%  Similarity=0.253  Sum_probs=30.3

Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 010735           58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFAD   94 (502)
Q Consensus        58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~   94 (502)
                      ++|+..+++.-..|..  .|..++...|..++..+..
T Consensus         7 P~dl~~aL~~~p~a~~--~f~~l~~~~rr~~i~wi~~   41 (63)
T PF13376_consen    7 PEDLEAALEANPEAKE--FFESLTPSYRREYIRWINS   41 (63)
T ss_pred             CHHHHHHHHCCHHHHH--HHHHCCHHHHHHHHHHHHH
Confidence            4789999998888888  7999999999999988765


No 171
>PRK10680 molybdopterin biosynthesis protein MoeA; Provisional
Probab=31.57  E-value=48  Score=34.41  Aligned_cols=51  Identities=20%  Similarity=0.143  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHcCCCCceEEEecCCchhHHHHHHh-CCCcCEEEEcCCcHHHH
Q 010735          202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS-HMDIDKVSFTGSTDVGR  252 (502)
Q Consensus       202 ~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~-~~~v~~V~ftGs~~~g~  252 (502)
                      ...|..++.+.|.-...+.+++.+.+.+.+.|.+ ..+.|.|+.||++..|.
T Consensus       206 ~~~l~a~l~~~G~~~~~~~~v~Dd~~~i~~~l~~a~~~~DlvIttGG~S~G~  257 (411)
T PRK10680        206 RLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGE  257 (411)
T ss_pred             HHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHhccCCCEEEEcCCCCCCC
Confidence            4567778888887655566666655455555543 34579999999998753


No 172
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=31.17  E-value=5.3e+02  Score=25.49  Aligned_cols=128  Identities=14%  Similarity=0.098  Sum_probs=75.0

Q ss_pred             cCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEec-CCc-------hhHHHHHHhCCCcCEEEEcCCc-----HHHH
Q 010735          186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP-GFG-------PTAGAAIASHMDIDKVSFTGST-----DVGR  252 (502)
Q Consensus       186 aGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~-g~~-------~~~~~~l~~~~~v~~V~ftGs~-----~~g~  252 (502)
                      .|+.-++--|-.   .+..+...+.+.|+-  .=.++. |+.       .+..++|.++|+.+.|...+-.     ..++
T Consensus       150 ~G~ValiSQSG~---l~~~l~~~~~~~giG--~S~~VS~Gn~~~adv~~~d~L~yl~~Dp~T~~I~ly~E~~G~~~~d~~  224 (300)
T PLN00125        150 PGRIGIVSRSGT---LTYEAVFQTTAVGLG--QSTCVGIGGDPFNGTNFVDCLEKFVKDPQTEGIILIGEIGGTAEEDAA  224 (300)
T ss_pred             CCcEEEEeCCcc---HHHHHHHHHHHcCCC--eEEEEEeCCCCCCCCCHHHHHHHHhhCCCCcEEEEEeccCCchHHHHH
Confidence            587766644432   223355556666653  333333 211       2567888899999999887663     4677


Q ss_pred             HHHHHHhcCCCCceEEecCCCCce-EE--ccCCCHHH---HHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHH
Q 010735          253 QVMQAAATSNLKPVSLELGGKSPL-LI--FDDVDVNT---AADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK  326 (502)
Q Consensus       253 ~i~~~aa~~~~~~~~~e~gG~~~~-iV--~~dadl~~---aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~  326 (502)
                      .+.+.+.  ..||+++--.|.+.. =.  .....+..   --..+..++|...|        +++.++ .+++.+.+++.
T Consensus       225 ~f~~aa~--~~KPVV~lk~Grs~~~g~~~sHTGala~~~~G~~~~~~a~~rq~G--------vi~v~~-~~el~~~~~~~  293 (300)
T PLN00125        225 AFIKESG--TEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAG--------VTVVES-PAKIGVAMLEV  293 (300)
T ss_pred             HHHHHhc--CCCCEEEEEecCCCCCCCCccchhhhhcCCCCCHHHHHHHHHHCC--------CeEeCC-HHHHHHHHHHH
Confidence            7777643  479999988888751 11  11111210   11244566777777        455555 57777777777


Q ss_pred             Hhc
Q 010735          327 AKA  329 (502)
Q Consensus       327 ~~~  329 (502)
                      ++.
T Consensus       294 ~~~  296 (300)
T PLN00125        294 FKE  296 (300)
T ss_pred             HHh
Confidence            654


No 173
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT).  MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein.  The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=30.63  E-value=55  Score=28.61  Aligned_cols=51  Identities=20%  Similarity=0.173  Sum_probs=34.9

Q ss_pred             HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHh---CCCcCEEEEcCCcHHH
Q 010735          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVG  251 (502)
Q Consensus       201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~---~~~v~~V~ftGs~~~g  251 (502)
                      ....+.+.+.+.|.......+++.+.+++.+.|.+   ....|.|+.||+...+
T Consensus        21 n~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~~~~DlVittGG~s~g   74 (152)
T cd00886          21 SGPALVELLEEAGHEVVAYEIVPDDKDEIREALIEWADEDGVDLILTTGGTGLA   74 (152)
T ss_pred             hHHHHHHHHHHcCCeeeeEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCcCCC
Confidence            34567888999998766667777655555555443   1257899999998744


No 174
>PRK14497 putative molybdopterin biosynthesis protein MoeA/unknown domain fusion protein; Provisional
Probab=29.43  E-value=36  Score=36.60  Aligned_cols=50  Identities=20%  Similarity=0.139  Sum_probs=33.9

Q ss_pred             HHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhC-CCcCEEEEcCCcHHH
Q 010735          202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH-MDIDKVSFTGSTDVG  251 (502)
Q Consensus       202 ~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~-~~v~~V~ftGs~~~g  251 (502)
                      +..|...+.+.|...-...+++.+.+.+.+.|.+. .+.|.|+.||++..|
T Consensus       208 s~~L~a~l~~~G~~v~~~~iv~Dd~e~i~~~l~~al~~~DlVIttGGtS~G  258 (546)
T PRK14497        208 LHYLYSKLKSEGYKIVGLSLLSDDKESIKNEIKRAISVADVLILTGGTSAG  258 (546)
T ss_pred             HHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHhhhcCCEEEEcCCccCC
Confidence            45677778889876555666766544445554332 357999999999766


No 175
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=28.13  E-value=4.5e+02  Score=24.93  Aligned_cols=97  Identities=18%  Similarity=0.028  Sum_probs=56.0

Q ss_pred             hHHhhhhhHHHHHHc-CCeEEEecCCCcHHHHHHHHHHHHHcCCCCceE---------EEecCCchhHHHHHH--hCCCc
Q 010735          172 PTTMFFMKVSPALAA-GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVL---------NVVPGFGPTAGAAIA--SHMDI  239 (502)
Q Consensus       172 P~~~~~~~i~~ALaa-GN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~---------~~v~g~~~~~~~~l~--~~~~v  239 (502)
                      |..+....+..||.+ |-.=|---+|..+.....+.+-|.++|+---.+         .+-.-+...+.+.+.  .+++.
T Consensus       103 p~tt~~~A~~~AL~alg~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~~~a  182 (239)
T TIGR02990       103 PVVTPSSAAVDGLAALGVRRISLLTPYTPETSRPMAQYFAVRGFEIVNFTCLGLTDDREMARISPDCIVEAALAAFDPDA  182 (239)
T ss_pred             CeeCHHHHHHHHHHHcCCCEEEEECCCcHHHHHHHHHHHHhCCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhcCCCC
Confidence            444555555555554 444455566788889999999999888642111         111111222223322  37889


Q ss_pred             CEEEEcCCcHHHHHHHHHHhcCCCCceEE
Q 010735          240 DKVSFTGSTDVGRQVMQAAATSNLKPVSL  268 (502)
Q Consensus       240 ~~V~ftGs~~~g~~i~~~aa~~~~~~~~~  268 (502)
                      |+|+..+..--.-.+....-..-+|||+.
T Consensus       183 DAifisCTnLrt~~vi~~lE~~lGkPVls  211 (239)
T TIGR02990       183 DALFLSCTALRAATCAQRIEQAIGKPVVT  211 (239)
T ss_pred             CEEEEeCCCchhHHHHHHHHHHHCCCEEE
Confidence            99998877654444444443355788764


No 176
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=25.20  E-value=86  Score=27.09  Aligned_cols=51  Identities=27%  Similarity=0.249  Sum_probs=32.2

Q ss_pred             HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhC-CCcCEEEEcCCcHHH
Q 010735          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH-MDIDKVSFTGSTDVG  251 (502)
Q Consensus       201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~-~~v~~V~ftGs~~~g  251 (502)
                      ....+.+.|.+.|..-....++..+..++.+.|.+. .+.|.|+.||++..+
T Consensus        28 n~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~~DliIttGG~g~g   79 (144)
T TIGR00177        28 NGPLLAALLEEAGFNVSRLGIVPDDPEEIREILRKAVDEADVVLTTGGTGVG   79 (144)
T ss_pred             cHHHHHHHHHHCCCeEEEEeecCCCHHHHHHHHHHHHhCCCEEEECCCCCCC
Confidence            345677778888865444555555444455554432 357899999988755


No 177
>PF12340 DUF3638:  Protein of unknown function (DUF3638);  InterPro: IPR022099  This domain family is found in eukaryotes, and is approximately 230 amino acids in length. There are two conserved sequence motifs: LLE and NMG. 
Probab=24.71  E-value=3.9e+02  Score=25.29  Aligned_cols=81  Identities=20%  Similarity=0.358  Sum_probs=54.8

Q ss_pred             CCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCC-----CCCCCCccccc
Q 010735          271 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD-----PFDPAVRQGPQ  345 (502)
Q Consensus       271 gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~-----~~~~~~~~gpl  345 (502)
                      .||+.+|+.           ++...+.+..+    .-+++|++..+++-.+.|..++..+ ++.     |++.++.    
T Consensus        52 eGKTsVI~P-----------mla~~LAdg~~----LvrviVpk~Ll~q~~~~L~~~lg~l-~~r~i~~lpFsR~~~----  111 (229)
T PF12340_consen   52 EGKTSVIVP-----------MLALALADGSR----LVRVIVPKALLEQMRQMLRSRLGGL-LNRRIYHLPFSRSTP----  111 (229)
T ss_pred             CCccchHHH-----------HHHHHHcCCCc----EEEEEcCHHHHHHHHHHHHHHHHHH-hCCeeEEecccCCCC----
Confidence            588887742           22233444443    4589999999888888888888764 232     4554443    


Q ss_pred             CCHHHHHHHHHHHHHHHHcCCEEEeC
Q 010735          346 VDKKQFDRILSYIEHGKREGATLLTG  371 (502)
Q Consensus       346 ~~~~~~~~~~~~i~~a~~~Ga~v~~g  371 (502)
                      .+....+.+.+.++++...|+.+++-
T Consensus       112 ~~~~~~~~~~~l~~~~~~~~gill~~  137 (229)
T PF12340_consen  112 LTPETLEKIRQLLEECMRSGGILLAT  137 (229)
T ss_pred             CCHHHHHHHHHHHHHHHHcCCEEEeC
Confidence            45677888999999998887766543


No 178
>PF00994 MoCF_biosynth:  Probable molybdopterin binding domain;  InterPro: IPR001453 Eukaryotic and prokaryotic molybdoenzymes require a molybdopterin cofactor (MoCF) for their activity. The biosynthesis of this cofactor involves a complex multistep enzymatic pathway. One of the eukaryotic proteins involved in this pathway is the Drosophila protein cinnamon [] which is highly similar to gephyrin, a rat microtubule-associated protein which was thought to anchor the glycine receptor to subsynaptic microtubules. Cinnamon and gephyrin are evolutionary related, in their N-terminal half, to the Escherichia coli MoCF biosynthesis proteins mog/chlG and moaB/chlA2 and, in their C-terminal half, to E. coli moeA/chlE.; GO: 0006777 Mo-molybdopterin cofactor biosynthetic process; PDB: 3TCR_B 1O8O_B 1O8Q_G 1EAV_D 1O8N_C 1UUX_A 1UUY_A 2G2C_A 2G4R_C 3K6A_F ....
Probab=24.28  E-value=95  Score=26.66  Aligned_cols=51  Identities=22%  Similarity=0.141  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhC-CCcCEEEEcCCcH
Q 010735          199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH-MDIDKVSFTGSTD  249 (502)
Q Consensus       199 ~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~-~~v~~V~ftGs~~  249 (502)
                      -..+..+.+.|.+.|+.-....+++.+...+.+.+... .+.|.|+.||++.
T Consensus        16 d~n~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~~D~VittGG~g   67 (144)
T PF00994_consen   16 DSNGPFLAALLEELGIEVIRYGIVPDDPDAIKEALRRALDRADLVITTGGTG   67 (144)
T ss_dssp             BHHHHHHHHHHHHTTEEEEEEEEEESSHHHHHHHHHHHHHTTSEEEEESSSS
T ss_pred             EhHHHHHHHHHHHcCCeeeEEEEECCCHHHHHHHHHhhhccCCEEEEcCCcC
Confidence            34567788999999986666777877665666666432 3458999999875


No 179
>PF07085 DRTGG:  DRTGG domain;  InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=24.21  E-value=1.5e+02  Score=23.76  Aligned_cols=45  Identities=22%  Similarity=0.292  Sum_probs=29.4

Q ss_pred             CCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735          214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA  259 (502)
Q Consensus       214 lP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa  259 (502)
                      +.++.+-+++++..+....... .++..+.+||+......+.+.+.
T Consensus        38 ~~~~~lvIt~gdR~di~~~a~~-~~i~~iIltg~~~~~~~v~~la~   82 (105)
T PF07085_consen   38 LKPGDLVITPGDREDIQLAAIE-AGIACIILTGGLEPSEEVLELAK   82 (105)
T ss_dssp             HHTTEEEEEETT-HHHHHHHCC-TTECEEEEETT----HHHHHHHH
T ss_pred             cCCCeEEEEeCCcHHHHHHHHH-hCCCEEEEeCCCCCCHHHHHHHH
Confidence            4447777787876666555544 45899999999999999888876


No 180
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=24.01  E-value=92  Score=26.42  Aligned_cols=51  Identities=24%  Similarity=0.155  Sum_probs=33.3

Q ss_pred             HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHh-CCCcCEEEEcCCcHHH
Q 010735          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS-HMDIDKVSFTGSTDVG  251 (502)
Q Consensus       201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~-~~~v~~V~ftGs~~~g  251 (502)
                      ....+.+.+++.|.......+++.+...+.+.|.+ ....|.|+.||++..+
T Consensus        19 ~~~~l~~~l~~~G~~~~~~~~v~Dd~~~I~~~l~~~~~~~dliittGG~g~g   70 (135)
T smart00852       19 NGPALAELLTELGIEVTRYVIVPDDKEAIKEALREALERADLVITTGGTGPG   70 (135)
T ss_pred             cHHHHHHHHHHCCCeEEEEEEeCCCHHHHHHHHHHHHhCCCEEEEcCCCCCC
Confidence            45678888999997665666676544444444432 1247889999987643


No 181
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=23.97  E-value=1.8e+02  Score=28.54  Aligned_cols=57  Identities=16%  Similarity=0.001  Sum_probs=42.4

Q ss_pred             HHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHH
Q 010735          231 AAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAA  288 (502)
Q Consensus       231 ~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa  288 (502)
                      +.+..++++|.|++..++..-......+. ..+|.++.|.+-..--+|-+..+++...
T Consensus        57 e~ll~~~dIDaV~iaTp~~~H~e~a~~al-~aGk~VIdekPa~~~plvvp~VN~~~~~  113 (285)
T TIGR03215        57 DGLLANPDIDIVFDATSAKAHARHARLLA-ELGKIVIDLTPAAIGPYVVPAVNLDEHL  113 (285)
T ss_pred             HHHhcCCCCCEEEECCCcHHHHHHHHHHH-HcCCEEEECCccccCCccCCCcCHHHHh
Confidence            45667889999999888888877777766 6789998887655434566777766544


No 182
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=23.32  E-value=1e+02  Score=26.10  Aligned_cols=51  Identities=27%  Similarity=0.196  Sum_probs=32.3

Q ss_pred             HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhC-CCcCEEEEcCCcHHH
Q 010735          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH-MDIDKVSFTGSTDVG  251 (502)
Q Consensus       201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~-~~v~~V~ftGs~~~g  251 (502)
                      ....+.+++.+.|.......+++.+..++.+.+.+. ...|.|..||++..+
T Consensus        20 n~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~i~~~~~~~DlvittGG~g~g   71 (133)
T cd00758          20 NGPALEALLEDLGCEVIYAGVVPDDADSIRAALIEASREADLVLTTGGTGVG   71 (133)
T ss_pred             hHHHHHHHHHHCCCEEEEeeecCCCHHHHHHHHHHHHhcCCEEEECCCCCCC
Confidence            456778888888865544555655444444554331 237899999998744


No 183
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=23.32  E-value=1.1e+02  Score=21.96  Aligned_cols=27  Identities=19%  Similarity=0.194  Sum_probs=20.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735           76 PWPRFSGAERRGIMLKFADLIEEHAEV  102 (502)
Q Consensus        76 ~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (502)
                      .|+.++.++|.....+..+....+..+
T Consensus        38 ~W~~ls~~eK~~y~~~a~~~~~~y~~e   64 (66)
T cd01390          38 KWKELSEEEKKKYEEKAEKDKERYEKE   64 (66)
T ss_pred             HHHhCCHHHHHHHHHHHHHHHHHHHHh
Confidence            699999999998888777766555443


No 184
>PRK14690 molybdopterin biosynthesis protein MoeA; Provisional
Probab=23.23  E-value=57  Score=33.96  Aligned_cols=52  Identities=17%  Similarity=0.109  Sum_probs=36.5

Q ss_pred             HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHh-CCCcCEEEEcCCcHHHH
Q 010735          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS-HMDIDKVSFTGSTDVGR  252 (502)
Q Consensus       201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~-~~~v~~V~ftGs~~~g~  252 (502)
                      ....|...+.+.|.......+++.+.+.+.+.|.+ ..+.|.|+.||+...|.
T Consensus       221 N~~~L~a~l~~~G~~v~~~~~v~Dd~~~i~~~l~~a~~~~DlIItTGG~S~G~  273 (419)
T PRK14690        221 NRPMLLALARRWGHAPVDLGRVGDDRAALAARLDRAAAEADVILTSGGASAGD  273 (419)
T ss_pred             HHHHHHHHHHHCCCEEEEEeeeCCCHHHHHHHHHHhCccCCEEEEcCCccCCC
Confidence            45677888999997765566666655555555543 24579999999998874


No 185
>cd00885 cinA Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.
Probab=22.90  E-value=1.8e+02  Score=25.92  Aligned_cols=49  Identities=20%  Similarity=0.090  Sum_probs=33.4

Q ss_pred             HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHh-CCCcCEEEEcCCcH
Q 010735          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS-HMDIDKVSFTGSTD  249 (502)
Q Consensus       201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~-~~~v~~V~ftGs~~  249 (502)
                      ....+++.+.+.|+......+++.+...+.+.|.. ..+.|.|+.||+..
T Consensus        20 n~~~l~~~L~~~G~~v~~~~~v~Dd~~~I~~~l~~~~~~~dlVIttGG~G   69 (170)
T cd00885          20 NAAFLAKELAELGIEVYRVTVVGDDEDRIAEALRRASERADLVITTGGLG   69 (170)
T ss_pred             HHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCEEEECCCCC
Confidence            45678888999998766666776544445555533 23578899888875


No 186
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=22.30  E-value=1.3e+02  Score=30.15  Aligned_cols=114  Identities=18%  Similarity=0.140  Sum_probs=70.1

Q ss_pred             cHHHHHHHHHHHHHcCCCCceEEEecCCchhHHH-----------------HHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735          198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGA-----------------AIASHMDIDKVSFTGSTDVGRQVMQAAAT  260 (502)
Q Consensus       198 ~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~-----------------~l~~~~~v~~V~ftGs~~~g~~i~~~aa~  260 (502)
                      +-.....|.++|.+..+|-..+.++.... +.++                 .+..-+++|.++|..+..+.+.+...++ 
T Consensus        10 TG~VG~~~~~~L~e~~f~~~~~~~~AS~r-SaG~~~~~f~~~~~~v~~~~~~~~~~~~~Divf~~ag~~~s~~~~p~~~-   87 (334)
T COG0136          10 TGAVGQVLLELLEERHFPFEELVLLASAR-SAGKKYIEFGGKSIGVPEDAADEFVFSDVDIVFFAAGGSVSKEVEPKAA-   87 (334)
T ss_pred             cchHHHHHHHHHHhcCCCcceEEEEeccc-ccCCccccccCccccCccccccccccccCCEEEEeCchHHHHHHHHHHH-
Confidence            34578889999998778877676665321 1111                 1222346999999999999999988887 


Q ss_pred             CCCCceEEecCC----CCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecc
Q 010735          261 SNLKPVSLELGG----KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG  314 (502)
Q Consensus       261 ~~~~~~~~e~gG----~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~  314 (502)
                      ..+..++-..+-    .+.-+|.+..+.+...+..-++ |.-++-.|+..+-++.-..
T Consensus        88 ~~G~~VIdnsSa~Rm~~DVPLVVPeVN~~~l~~~~~rg-~IianpNCst~~l~~aL~P  144 (334)
T COG0136          88 EAGCVVIDNSSAFRMDPDVPLVVPEVNPEHLIDYQKRG-FIIANPNCSTIQLVLALKP  144 (334)
T ss_pred             HcCCEEEeCCcccccCCCCCEecCCcCHHHHHhhhhCC-CEEECCChHHHHHHHHHHH
Confidence            566666654433    2445666777877744444334 3333445655554443333


No 187
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=22.19  E-value=3.9e+02  Score=26.25  Aligned_cols=130  Identities=15%  Similarity=0.027  Sum_probs=69.2

Q ss_pred             cCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEec-CC-------chhHHHHHHhCCCcCEEEEcCCc-HHH-HHHH
Q 010735          186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP-GF-------GPTAGAAIASHMDIDKVSFTGST-DVG-RQVM  255 (502)
Q Consensus       186 aGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~-g~-------~~~~~~~l~~~~~v~~V~ftGs~-~~g-~~i~  255 (502)
                      .|+.-++--|-   ..+..+.....+.|+-  .=.++. |+       -.+..++|.++|+.+.|.+..-. ..+ +...
T Consensus       145 ~G~valiSQSG---al~~~~~~~~~~~giG--~s~~Vs~Gn~~~~dv~~~D~l~~l~~Dp~T~~I~lylE~~~~~~~~a~  219 (291)
T PRK05678        145 KGRVGVVSRSG---TLTYEAVAQLTDLGFG--QSTCVGIGGDPINGTNFIDVLEAFEEDPETEAIVMIGEIGGSAEEEAA  219 (291)
T ss_pred             CCCEEEEeccH---HHHHHHHHHHHHcCCC--eEEEEEeCCCcCCCCCHHHHHHHHhhCCCCcEEEEEEecCCcHHHHHH
Confidence            68877775443   2334455555666653  223332 22       23456888999999999886542 111 1222


Q ss_pred             HHHhcCCCCceEEecCCCCce-EE--ccCCCHH---HHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhc
Q 010735          256 QAAATSNLKPVSLELGGKSPL-LI--FDDVDVN---TAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA  329 (502)
Q Consensus       256 ~~aa~~~~~~~~~e~gG~~~~-iV--~~dadl~---~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~  329 (502)
                      +.+.....||+++--.|++.. =.  ..+..+.   .--..+..++|...|        |+..++ .+++++.+++.++.
T Consensus       220 ~~~~~~~~KPVV~lk~Grs~~~g~~~sHTGala~~~~g~~~~~~a~~~q~G--------vi~v~~-~~el~~~~~~~~~~  290 (291)
T PRK05678        220 EYIKANVTKPVVGYIAGVTAPPGKRMGHAGAIISGGKGTAEEKKEALEAAG--------VKVART-PSEIGELLKEVLKG  290 (291)
T ss_pred             HHHHHcCCCCEEEEEecCCCCCCCcccchhhhccCCCCCHHHHHHHHHHCC--------CeECCC-HHHHHHHHHHHHcc
Confidence            222212369999987787661 10  1111111   112345566677777        344444 57777777666553


No 188
>PRK09417 mogA molybdenum cofactor biosynthesis protein MogA; Provisional
Probab=22.17  E-value=1.6e+02  Score=27.05  Aligned_cols=52  Identities=17%  Similarity=0.022  Sum_probs=33.3

Q ss_pred             HHHHHHHHHHHcCCCCc--eEEEecCCchhHHHHHHhC---CCcCEEEEcCCcHHHH
Q 010735          201 IALYFAHLAKLAGVPDG--VLNVVPGFGPTAGAAIASH---MDIDKVSFTGSTDVGR  252 (502)
Q Consensus       201 ~~~~l~~~l~~aGlP~g--~~~~v~g~~~~~~~~l~~~---~~v~~V~ftGs~~~g~  252 (502)
                      ....+.+.+.+.|....  ...+++.+.+.+.+.|...   .+.|.|+.||++..+.
T Consensus        24 ng~~L~~~L~~~G~~g~~v~~~iVpDd~~~I~~aL~~a~~~~~~DlIITTGGtg~g~   80 (193)
T PRK09417         24 GIPALEEWLASALTSPFEIETRLIPDEQDLIEQTLIELVDEMGCDLVLTTGGTGPAR   80 (193)
T ss_pred             hHHHHHHHHHHcCCCCceEEEEECCCCHHHHHHHHHHHhhcCCCCEEEECCCCCCCC
Confidence            45677888888865321  1256665545555555442   3689999999987543


No 189
>PF11181 YflT:  Heat induced stress protein YflT
Probab=21.97  E-value=2.2e+02  Score=22.93  Aligned_cols=49  Identities=12%  Similarity=0.176  Sum_probs=37.0

Q ss_pred             EEEeCCHHHHHHHHhc---CCCC-ceEEEecCCHHHHHHHHhhcceeEEEEcC
Q 010735          408 LMKFKTVEEAIKSANN---TRYG-LAAGIMTKDLNVANTVSRSIRAGIIWINC  456 (502)
Q Consensus       408 v~~~~~~~eai~~~n~---~~~g-l~~~v~t~d~~~~~~~~~~l~~g~v~iN~  456 (502)
                      |-.|++.+||+..+++   .+|. --.+|+|+|.+....+.+..++-.+-...
T Consensus         3 Igv~~~~~E~~~~I~~L~~~Gy~~ddI~Vva~d~~~~~~l~~~t~~~~~~~~~   55 (103)
T PF11181_consen    3 IGVYDNEEEALSAIEELKAQGYSEDDIYVVAKDKDRTERLADQTDTNTVGASE   55 (103)
T ss_pred             EEEECCHHHHHHHHHHHHHcCCCcccEEEEEcCchHHHHHHHhcCCceecccc
Confidence            4467888888888876   5555 57899999999999999888555444433


No 190
>PRK03604 moaC bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA; Provisional
Probab=21.31  E-value=1.3e+02  Score=29.88  Aligned_cols=53  Identities=19%  Similarity=0.165  Sum_probs=38.3

Q ss_pred             HHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhC--CCcCEEEEcCCcHHHH
Q 010735          200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVGR  252 (502)
Q Consensus       200 ~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~--~~v~~V~ftGs~~~g~  252 (502)
                      .....+.+++.+.|...-...+++.+...+.+.+...  .+.|.|+.||++..+.
T Consensus       175 sn~~~L~~~L~~~G~~v~~~~iVpDD~~~I~~al~~a~~~~~DlIITTGGtg~g~  229 (312)
T PRK03604        175 RSGKLIVEGLEEAGFEVSHYTIIPDEPAEIAAAVAAWIAEGYALIITTGGTGLGP  229 (312)
T ss_pred             hHHHHHHHHHHHCCCEEEEEEEcCCCHHHHHHHHHHhhhCCCCEEEECCCCCCCC
Confidence            4556788889999987666677777555566666543  4689999999987543


No 191
>PF08002 DUF1697:  Protein of unknown function (DUF1697);  InterPro: IPR012545 This family contains many hypothetical bacterial proteins.; PDB: 2HIY_B.
Probab=20.66  E-value=1.7e+02  Score=25.19  Aligned_cols=50  Identities=14%  Similarity=0.092  Sum_probs=27.4

Q ss_pred             HHcCCeEEEecCCCcHHHHHHHHHHHHH-cCCCCceEEEecCCchhHHHHHHhCC
Q 010735          184 LAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPGFGPTAGAAIASHM  237 (502)
Q Consensus       184 LaaGN~vv~kps~~~~~~~~~l~~~l~~-aGlP~g~~~~v~g~~~~~~~~l~~~~  237 (502)
                      |.+||.|.- ++.........+.+.+.+ .|++..++-.-   ..++...+.++|
T Consensus        40 i~SGNvvf~-~~~~~~~l~~~ie~~l~~~fG~~v~v~vrs---~~el~~i~~~nP   90 (137)
T PF08002_consen   40 IQSGNVVFE-SDRDPAELAAKIEKALEERFGFDVPVIVRS---AEELRAIIAANP   90 (137)
T ss_dssp             TTTTEEEEE-ESS-HHHHHHHHHHHHHHH-TT---EEEEE---HHHHHHHHTT--
T ss_pred             EeeCCEEEe-cCCChHHHHHHHHHHHHHhcCCCeEEEEee---HHHHHHHHHHCC
Confidence            457997666 666666777777777754 58886665332   335555555555


No 192
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=20.00  E-value=6.8e+02  Score=22.86  Aligned_cols=58  Identities=24%  Similarity=0.240  Sum_probs=39.5

Q ss_pred             CCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735          196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA  259 (502)
Q Consensus       196 ~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa  259 (502)
                      +..+.....+.+=....|++.  +.++.|+.+   +.|...+..|.|+.-|| ..-..|.+.+.
T Consensus        65 e~~~~a~~~~~~N~~~fg~~n--~~vv~g~Ap---~~L~~~~~~daiFIGGg-~~i~~ile~~~  122 (187)
T COG2242          65 ERDEEALELIERNAARFGVDN--LEVVEGDAP---EALPDLPSPDAIFIGGG-GNIEEILEAAW  122 (187)
T ss_pred             ecCHHHHHHHHHHHHHhCCCc--EEEEeccch---HhhcCCCCCCEEEECCC-CCHHHHHHHHH
Confidence            445556666667777778554  899998655   44556567888877777 76777766655


Done!