Query 010735
Match_columns 502
No_of_seqs 230 out of 1845
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 13:09:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010735.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010735hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 5E-112 2E-116 886.4 54.1 478 19-498 4-485 (490)
2 3rh9_A Succinate-semialdehyde 100.0 2E-106 6E-111 848.5 55.9 476 19-498 9-486 (506)
3 3ed6_A Betaine aldehyde dehydr 100.0 3E-106 1E-110 849.5 57.3 478 21-502 32-518 (520)
4 3u4j_A NAD-dependent aldehyde 100.0 7E-106 3E-110 847.8 55.7 481 18-502 19-505 (528)
5 3ifg_A Succinate-semialdehyde 100.0 3E-106 1E-110 843.6 50.9 471 21-495 12-483 (484)
6 4f3x_A Putative aldehyde dehyd 100.0 1E-105 3E-110 841.9 51.7 472 20-496 24-497 (498)
7 3ek1_A Aldehyde dehydrogenase; 100.0 1E-105 3E-110 842.2 50.3 470 22-497 33-503 (504)
8 2o2p_A Formyltetrahydrofolate 100.0 2E-105 8E-110 842.0 53.1 475 22-496 37-517 (517)
9 3b4w_A Aldehyde dehydrogenase; 100.0 8E-105 3E-109 835.3 53.8 475 20-497 7-483 (495)
10 1bxs_A Aldehyde dehydrogenase; 100.0 2E-104 7E-109 832.5 57.0 478 21-498 20-498 (501)
11 3iwj_A Putative aminoaldehyde 100.0 1E-104 3E-109 837.0 54.6 479 19-499 5-492 (503)
12 3k2w_A Betaine-aldehyde dehydr 100.0 4E-105 1E-109 838.7 51.3 477 18-498 9-490 (497)
13 2ve5_A BADH, betaine aldehyde 100.0 1E-104 3E-109 836.5 53.9 481 16-499 1-486 (490)
14 1a4s_A ALDH, betaine aldehyde 100.0 1E-104 5E-109 834.8 54.2 481 15-500 13-500 (503)
15 3i44_A Aldehyde dehydrogenase; 100.0 3E-104 1E-108 830.2 55.3 474 14-493 18-495 (497)
16 1o04_A Aldehyde dehydrogenase, 100.0 2E-104 6E-109 833.1 52.0 476 22-497 20-496 (500)
17 3r31_A BADH, betaine aldehyde 100.0 4E-105 1E-109 840.5 46.9 473 17-497 10-489 (517)
18 3prl_A NADP-dependent glyceral 100.0 4E-104 1E-108 831.3 53.6 469 20-498 10-485 (505)
19 2d4e_A 5-carboxymethyl-2-hydro 100.0 7E-104 2E-108 832.2 54.6 472 22-498 27-507 (515)
20 2imp_A Lactaldehyde dehydrogen 100.0 5E-104 2E-108 828.5 52.8 475 17-495 2-478 (479)
21 3jz4_A Succinate-semialdehyde 100.0 8E-104 3E-108 827.1 53.7 471 21-495 9-480 (481)
22 1wnd_A Putative betaine aldehy 100.0 8E-104 3E-108 826.8 52.8 470 20-495 22-494 (495)
23 4e4g_A Methylmalonate-semialde 100.0 5E-104 2E-108 832.8 50.0 477 16-497 21-506 (521)
24 3qan_A 1-pyrroline-5-carboxyla 100.0 2E-103 6E-108 831.5 51.7 472 21-499 37-519 (538)
25 3r64_A NAD dependent benzaldeh 100.0 1E-102 3E-107 822.7 52.9 472 18-497 9-486 (508)
26 4dng_A Uncharacterized aldehyd 100.0 9E-103 3E-107 820.7 50.9 474 19-499 4-481 (485)
27 3pqa_A Lactaldehyde dehydrogen 100.0 2E-102 7E-107 814.5 50.0 460 24-498 2-466 (486)
28 3ros_A NAD-dependent aldehyde 100.0 2E-102 6E-107 814.6 49.1 455 38-497 5-459 (484)
29 2w8n_A Succinate-semialdehyde 100.0 2E-102 5E-107 817.1 48.8 467 22-495 13-485 (487)
30 1euh_A NADP dependent non phos 100.0 4E-102 1E-106 813.3 50.9 467 18-496 1-474 (475)
31 3ty7_A Putative aldehyde dehyd 100.0 2E-102 6E-107 816.9 46.1 469 18-494 4-475 (478)
32 2j6l_A Aldehyde dehydrogenase 100.0 2E-101 6E-106 811.7 50.7 471 19-496 21-499 (500)
33 1uxt_A Glyceraldehyde-3-phosph 100.0 1E-101 4E-106 812.2 48.4 466 21-497 18-493 (501)
34 1t90_A MMSDH, probable methylm 100.0 5E-101 2E-105 806.3 50.7 470 22-497 6-481 (486)
35 1uzb_A 1-pyrroline-5-carboxyla 100.0 1E-100 4E-105 808.2 52.0 468 21-495 37-515 (516)
36 3etf_A Putative succinate-semi 100.0 2.3E-99 8E-104 790.7 50.2 456 35-495 5-460 (462)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 1.1E-98 4E-103 796.3 49.6 472 20-497 62-552 (563)
38 3ju8_A Succinylglutamic semial 100.0 9.4E-98 3E-102 782.2 49.6 461 23-496 7-471 (490)
39 4h7n_A Aldehyde dehydrogenase; 100.0 1.5E-97 5E-102 778.4 45.7 461 34-502 3-471 (474)
40 4f9i_A Proline dehydrogenase/d 100.0 8.9E-96 3E-100 813.7 50.3 472 20-497 530-1011(1026)
41 2y53_A Aldehyde dehydrogenase 100.0 6.7E-96 2E-100 775.9 43.9 464 21-494 7-517 (534)
42 3lns_A Benzaldehyde dehydrogen 100.0 2.7E-94 9.1E-99 750.4 48.5 444 36-494 5-455 (457)
43 3sza_A Aldehyde dehydrogenase, 100.0 1.1E-92 3.7E-97 738.6 48.3 429 55-496 14-448 (469)
44 3v4c_A Aldehyde dehydrogenase 100.0 3.4E-92 1.1E-96 746.6 42.2 458 18-497 26-518 (528)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 2.4E-89 8.2E-94 721.9 43.5 442 34-493 4-480 (510)
46 3haz_A Proline dehydrogenase; 100.0 1.2E-87 4.1E-92 746.8 44.5 435 53-496 544-987 (1001)
47 2h5g_A Delta 1-pyrroline-5-car 100.0 9.1E-83 3.1E-87 662.3 25.2 408 38-497 8-436 (463)
48 3k9d_A LMO1179 protein, aldehy 100.0 1.3E-80 4.3E-85 648.7 28.5 420 52-497 5-450 (464)
49 1vlu_A Gamma-glutamyl phosphat 100.0 1.7E-80 5.8E-85 646.0 19.9 396 60-497 15-441 (468)
50 4ghk_A Gamma-glutamyl phosphat 100.0 7.6E-78 2.6E-82 623.8 27.5 390 58-497 25-440 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 9.9E-78 3.4E-82 620.0 27.3 390 57-498 12-424 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 1.1E-76 3.9E-81 616.9 25.9 418 53-498 1-451 (452)
53 4gic_A HDH, histidinol dehydro 97.7 0.038 1.3E-06 54.8 28.0 336 76-492 26-399 (423)
54 1kae_A HDH, histidinol dehydro 97.1 0.16 5.6E-06 50.4 24.0 257 149-493 113-393 (434)
55 1s7i_A Hypothetical protein PA 65.9 24 0.00083 28.6 7.9 74 349-427 30-108 (124)
56 1b93_A Protein (methylglyoxal 62.7 16 0.00053 31.0 6.2 114 161-300 12-135 (152)
57 2fiu_A Conserved hypothetical 60.1 23 0.00079 27.4 6.4 60 347-426 16-76 (99)
58 3v4g_A Arginine repressor; vib 60.0 24 0.00083 30.6 7.1 37 186-225 116-152 (180)
59 3v42_A Folliculin; tumor suppr 55.6 13 0.00044 33.7 4.8 69 177-253 21-89 (226)
60 1vmd_A MGS, methylglyoxal synt 54.2 18 0.00061 31.4 5.2 120 155-300 21-151 (178)
61 2yvq_A Carbamoyl-phosphate syn 49.0 26 0.00089 29.1 5.4 63 206-270 60-132 (143)
62 3lo3_A Uncharacterized conserv 45.7 46 0.0016 25.4 5.9 60 347-426 15-75 (94)
63 3pzy_A MOG; ssgcid, seattle st 40.8 20 0.00069 30.6 3.5 51 201-252 28-80 (164)
64 3lap_A Arginine repressor; arg 40.7 1E+02 0.0035 26.4 8.0 37 185-225 110-146 (170)
65 2xw6_A MGS, methylglyoxal synt 39.4 18 0.00062 29.8 2.9 80 180-270 24-112 (134)
66 3fxd_A Protein ICMQ; helix bun 37.4 96 0.0033 21.1 5.6 45 57-107 6-50 (57)
67 3rfq_A Pterin-4-alpha-carbinol 37.4 22 0.00076 31.1 3.3 52 201-252 50-103 (185)
68 1b4b_A Arginine repressor; cor 36.5 64 0.0022 23.1 5.1 36 186-225 12-47 (71)
69 2zfz_A Arginine repressor; DNA 36.1 69 0.0023 23.5 5.4 36 186-225 20-55 (79)
70 3iwt_A 178AA long hypothetical 35.2 58 0.002 27.9 5.7 52 200-251 40-94 (178)
71 1xxa_A ARGR, arginine represso 35.2 50 0.0017 24.3 4.4 37 186-225 14-50 (78)
72 3hhl_A RPA0582; alpha-beta-bar 34.0 78 0.0027 26.2 6.0 65 345-426 45-110 (143)
73 2ioj_A Hypothetical protein AF 31.0 41 0.0014 27.5 3.8 49 217-266 53-101 (139)
74 2p5m_A Arginine repressor; alp 30.0 63 0.0022 24.0 4.3 36 186-225 24-59 (83)
75 2pjk_A 178AA long hypothetical 28.1 36 0.0012 29.4 3.1 53 200-252 40-95 (178)
76 1y5e_A Molybdenum cofactor bio 26.6 38 0.0013 28.9 2.9 52 200-251 31-85 (169)
77 3u3x_A Oxidoreductase; structu 25.4 3.4E+02 0.012 25.8 10.0 139 163-334 29-169 (361)
78 1mkz_A Molybdenum cofactor bio 24.5 36 0.0012 29.2 2.4 51 201-251 29-82 (172)
79 2i2c_A Probable inorganic poly 23.5 76 0.0026 29.3 4.6 88 190-295 5-94 (272)
80 3kbq_A Protein TA0487; structu 22.5 40 0.0014 29.0 2.2 50 200-249 23-73 (172)
81 1b4a_A Arginine repressor; hel 22.2 1.2E+02 0.0042 25.3 5.1 36 186-225 90-125 (149)
82 2v9v_A Selenocysteine-specific 22.1 83 0.0028 25.2 4.1 80 290-372 36-124 (135)
83 3ufx_B Succinyl-COA synthetase 21.2 5E+02 0.017 25.2 10.3 73 199-272 257-342 (397)
84 2pbq_A Molybdenum cofactor bio 21.0 53 0.0018 28.3 2.7 50 201-251 26-81 (178)
85 2is8_A Molybdopterin biosynthe 20.4 33 0.0011 29.2 1.2 51 201-251 22-75 (164)
86 1wu2_A MOEA protein, molybdopt 20.0 20 0.00068 35.5 -0.3 52 201-252 212-264 (396)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=4.6e-112 Score=886.42 Aligned_cols=478 Identities=42% Similarity=0.736 Sum_probs=458.4
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
.+..++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|++
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 81 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRE 81 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 4456799999999988899999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (502)
|.++|++++++|+|||+.++...|+..+++.+++++.+++++.+...+...+...+++++|+|||++|+|||||+...++
T Consensus 82 ~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~ 161 (490)
T 2wme_A 82 RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALW 161 (490)
T ss_dssp THHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhh
Confidence 99999999999999999987655799999999999999988887777766667788999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (502)
Q Consensus 179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 258 (502)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 162 ~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~ 241 (490)
T 2wme_A 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASA 241 (490)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred hHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999998866
Q ss_pred hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCC
Q 010735 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (502)
Q Consensus 259 a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~ 338 (502)
+.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 242 a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~ 321 (490)
T 2wme_A 242 SSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDE 321 (490)
T ss_dssp HHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccc
Confidence 65789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCH
Q 010735 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV 414 (502)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 414 (502)
++++||+++..+++++.++|++++.+|+++++||.... .+|+|+.|||+.+++++|++++||+||||++|++|+|+
T Consensus 322 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 401 (490)
T 2wme_A 322 NTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE 401 (490)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCH
T ss_pred cCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCH
Confidence 99999999999999999999999999999999998653 36899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 415 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 415 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
||||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 402 deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i 481 (490)
T 2wme_A 402 DEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQV 481 (490)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeEEEE
Confidence 99999999999999999999999999999999999999999988788899999999999999999999999999999999
Q ss_pred ecCC
Q 010735 495 PIFN 498 (502)
Q Consensus 495 ~~~~ 498 (502)
+.+.
T Consensus 482 ~~g~ 485 (490)
T 2wme_A 482 ELGD 485 (490)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 9864
No 2
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=1.7e-106 Score=848.49 Aligned_cols=476 Identities=33% Similarity=0.584 Sum_probs=453.4
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 86 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE 86 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4556899999999987789999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceee-cCCeEEEEEcCCChhHHhhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~n~P~~~~~ 177 (502)
+.++|++++++|+|||+.++. .|+..+++.+++++.++++..+...+...+...++++ +|+|||++|+|||||+...+
T Consensus 87 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 87 NREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence 999999999999999999765 7999999999999999988776655444456678889 99999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+||.|+||||+.+|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (502)
Q Consensus 258 aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~ 337 (502)
++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 246 aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 246 TA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp TT-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hh-hcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 87 78999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC-CCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHH
Q 010735 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEE 416 (502)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 416 (502)
+++++||+++..+++++.+++++++.+|+++++||...+. .|+|+.|||+.+++++|++++||+||||++|++|+|+||
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 404 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEE 404 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHH
Confidence 9999999999999999999999999999999999976443 799999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 417 AIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 417 ai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|+++.
T Consensus 405 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 405 VIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999998876
Q ss_pred CC
Q 010735 497 FN 498 (502)
Q Consensus 497 ~~ 498 (502)
..
T Consensus 485 ~~ 486 (506)
T 3rh9_A 485 AE 486 (506)
T ss_dssp --
T ss_pred cc
Confidence 54
No 3
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=2.8e-106 Score=849.52 Aligned_cols=478 Identities=39% Similarity=0.706 Sum_probs=455.3
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~--~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++|| + .|+.++..+|.++|++++++|++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~~ 109 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQETAETRGKKVRAIADKIKE 109 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHHH
Confidence 3468999999988778899999999999999999999999999999999999 8 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (502)
+.++|++++++|+|||+.++. .|+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+|||||+...+
T Consensus 110 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 188 (520)
T 3ed6_A 110 HREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQAS 188 (520)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHH
Confidence 999999999999999999764 6999999999999999887766555433 45567899999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
+++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|++++.++++.|+.||+||.|+||||+.+|+.|++.
T Consensus 189 ~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~ 268 (520)
T 3ed6_A 189 WKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKN 268 (520)
T ss_dssp HHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999878899999999999999999999999999999
Q ss_pred HhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (502)
Q Consensus 258 aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~ 337 (502)
++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|
T Consensus 269 aa-~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 269 AA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp HH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred hh-hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 88 78999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCC
Q 010735 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT 413 (502)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 413 (502)
+++++||++++.+++++.+++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence 999999999999999999999999999999999998642 3799999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 414 VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 414 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|+
T Consensus 428 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~ 507 (520)
T 3ed6_A 428 EQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHIL 507 (520)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998877889999999999999999999999999999999
Q ss_pred EecCC--CCCC
Q 010735 494 TPIFN--SPWL 502 (502)
Q Consensus 494 ~~~~~--~~~~ 502 (502)
+++.. ..||
T Consensus 508 ~~~~~~~~~~~ 518 (520)
T 3ed6_A 508 TNTNPQLVNWF 518 (520)
T ss_dssp EESSCCCCCCS
T ss_pred EcCCCCccCcc
Confidence 98763 4565
No 4
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.4e-106 Score=847.79 Aligned_cols=481 Identities=41% Similarity=0.712 Sum_probs=457.9
Q ss_pred cccccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHH
Q 010735 18 EIKFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPRFSGAERRGIMLKFAD 94 (502)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~--~~~~w~~~~~~~R~~~L~~~a~ 94 (502)
++...++||||+|+.+.++++++++||+| |+++++++.++.+|+++++++|++|| + .|+.++.++|.++|+++++
T Consensus 19 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~ 96 (528)
T 3u4j_A 19 IKSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVAD 96 (528)
T ss_dssp CCCBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHH
T ss_pred hccccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHH
Confidence 45567899999999987788999999999 99999999999999999999999999 7 7999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhH
Q 010735 95 LIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPT 173 (502)
Q Consensus 95 ~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~ 173 (502)
+|+++.++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+|||||+
T Consensus 97 ~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~ 175 (528)
T 3u4j_A 97 LILARQEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPF 175 (528)
T ss_dssp HHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHH
Confidence 999999999999999999999987 78999999999999999888766655543 4556889999999999999999999
Q ss_pred HhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHH
Q 010735 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (502)
Q Consensus 174 ~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~ 253 (502)
...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.++++.|+.||+||.|+||||+.+|+.
T Consensus 176 ~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 255 (528)
T 3u4j_A 176 IIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTK 255 (528)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987789999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccC
Q 010735 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (502)
Q Consensus 254 i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (502)
|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 256 i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 334 (528)
T 3u4j_A 256 LGEIAA-RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFG 334 (528)
T ss_dssp HHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEE
T ss_pred HHHHHH-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCC
Confidence 999987 8899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC-CCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 334 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
+|.++++++||+++..+++++.+++++++.+|+++++||..... +|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus 335 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 414 (528)
T 3u4j_A 335 DPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFK 414 (528)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeC
Confidence 99999999999999999999999999999999999999987544 79999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v 492 (502)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|
T Consensus 415 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v 494 (528)
T 3u4j_A 415 TADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494 (528)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999999999887889999999999999999999999999999999
Q ss_pred EEecC-CCCCC
Q 010735 493 VTPIF-NSPWL 502 (502)
Q Consensus 493 ~~~~~-~~~~~ 502 (502)
+++.+ ..+||
T Consensus 495 ~~~~~~~~~~~ 505 (528)
T 3u4j_A 495 HVTLGRPAPWF 505 (528)
T ss_dssp EEESSCCCCSC
T ss_pred EEeCCCCCCcc
Confidence 98865 33454
No 5
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=3.3e-106 Score=843.59 Aligned_cols=471 Identities=36% Similarity=0.612 Sum_probs=450.4
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (502)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999877788999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhh
Q 010735 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (502)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (502)
++|++++++|+|||+.++ ..|+..+++.+++++.++++..+...+.. .+...+++++|+|||++|+|||||+...+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEA-KGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK 168 (484)
T ss_dssp HHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence 999999999999999975 57999999999999998877666554432 4566789999999999999999999999999
Q ss_pred HHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (502)
Q Consensus 180 i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 259 (502)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+||.|.||||+.+|+.|++.++
T Consensus 169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999987
Q ss_pred cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (502)
Q Consensus 260 ~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~ 339 (502)
.++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 249 -~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 249 -PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp -GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred -ccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 419 (502)
+++||+++..+++++.+++++++.+|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 407 (484)
T 3ifg_A 328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVR 407 (484)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999987555799999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|++.
T Consensus 408 ~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 408 LANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999999877788999999999999999999999999999999764
No 6
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1e-105 Score=841.90 Aligned_cols=472 Identities=34% Similarity=0.612 Sum_probs=450.9
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
...++||||+|+.+.++ +++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 24 ~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 100 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIEKE 100 (498)
T ss_dssp CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 34579999999987656 999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (502)
.++|++++++|+|||..++...|+..+++.+++++.+++++.+...+. ..+...+++++|+|||++|+|||||+...++
T Consensus 101 ~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 180 (498)
T 4f3x_A 101 ADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAW 180 (498)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHH
Confidence 999999999999999998646899999999999999988776654432 2456688999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (502)
Q Consensus 179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 258 (502)
++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.++++.|+.||+||.|+||||+.+|+.|++.+
T Consensus 181 ~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a 259 (498)
T 4f3x_A 181 KLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAA 259 (498)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999998888999999999999999999999999999998
Q ss_pred hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCC
Q 010735 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (502)
Q Consensus 259 a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~ 338 (502)
+ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|+
T Consensus 260 a-~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~ 338 (498)
T 4f3x_A 260 A-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDT 338 (498)
T ss_dssp H-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGG
T ss_pred H-hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccc
Confidence 8 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcCC-EEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHH
Q 010735 339 AVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEA 417 (502)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 417 (502)
++++||++++.+++++.+++++++++|+ ++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 339 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 418 (498)
T 4f3x_A 339 ENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDA 418 (498)
T ss_dssp GCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCH
T ss_pred cCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHH
Confidence 9999999999999999999999999999 999999875558999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 418 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 418 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
|+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|++++
T Consensus 419 i~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 419 VAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp HHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEeC
Confidence 9999999999999999999999999999999999999998887799999999999999999999999999999998875
No 7
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1e-105 Score=842.24 Aligned_cols=470 Identities=38% Similarity=0.662 Sum_probs=450.0
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.+
T Consensus 33 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 110 (504)
T 3ek1_A 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANAD 110 (504)
T ss_dssp SSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999887788999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
+|++++++|+|||+.++ ..|+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+|||||+...++++
T Consensus 111 ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 189 (504)
T 3ek1_A 111 DIALIMTSEQGKPLAEA-RGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKA 189 (504)
T ss_dssp HHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHH
Confidence 99999999999999975 56999999999999999887766554432 34567899999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++.+.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 190 a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa- 268 (504)
T 3ek1_A 190 APALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA- 268 (504)
T ss_dssp HHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG-
T ss_pred HHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh-
Confidence 9999999999999999999999999999999999999999999988889999999999999999999999999999987
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 340 (502)
+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 269 ~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 348 (504)
T 3ek1_A 269 PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGV 348 (504)
T ss_dssp GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 420 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 420 (502)
++||+++..+++++.+++++++.+|+++++||.. .+|+|+.|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 349 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 426 (504)
T 3ek1_A 349 VIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQ 426 (504)
T ss_dssp CBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHH
Confidence 9999999999999999999999999999999976 26899999999999999999999999999999999999999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecC
Q 010735 421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
+|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|+++++
T Consensus 427 aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~g 503 (504)
T 3ek1_A 427 ANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAYK 503 (504)
T ss_dssp HHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEECC
T ss_pred HhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEecC
Confidence 99999999999999999999999999999999999987778899999999999999999999999999999998765
No 8
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=2.3e-105 Score=842.02 Aligned_cols=475 Identities=43% Similarity=0.794 Sum_probs=447.7
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+++.|+.++..+|.++|++++++|+++.+
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46899999998656779999999999999999999999999999999999973249999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc----cccccceeecCCeEEEEEcCCChhHHhhh
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (502)
+|++++++|+|||+.++...|+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+|||||+...+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 99999999999999976548999999999999999887766544431 22246899999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.++++.|+.||+||.|.||||+.+|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877889999999999999999999999999998
Q ss_pred HhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (502)
Q Consensus 258 aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~ 337 (502)
++.+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus 277 aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~ 356 (517)
T 2o2p_A 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE 356 (517)
T ss_dssp HHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTS
T ss_pred hHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 76357899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCC--HH
Q 010735 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VE 415 (502)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~ 415 (502)
+++++||+++..+++++.+++++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+| +|
T Consensus 357 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~d 436 (517)
T 2o2p_A 357 RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVD 436 (517)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHH
Confidence 9999999999999999999999999999999999976544699999999999999999999999999999999999 99
Q ss_pred HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 416 EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 416 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 437 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 437 AVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp HHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 99999999999999999999999999999999999999999877778999999999999999999999999999999875
Q ss_pred c
Q 010735 496 I 496 (502)
Q Consensus 496 ~ 496 (502)
+
T Consensus 517 ~ 517 (517)
T 2o2p_A 517 Y 517 (517)
T ss_dssp C
T ss_pred C
Confidence 3
No 9
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.1e-105 Score=835.30 Aligned_cols=475 Identities=40% Similarity=0.686 Sum_probs=449.5
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
+..++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.+.|+.++..+|.++|++++++|+++
T Consensus 7 ~~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~ 86 (495)
T 3b4w_A 7 EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAER 86 (495)
T ss_dssp ECSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHH
Confidence 44478999999987667899999999999999999999999999999999999732499999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhh
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (502)
.++|++++++|+|||+.++...|+..+++.+++++.++++..+...+...+...++.++|+|||++|+|||||+...+++
T Consensus 87 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 87 KDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 99999999999999999765489999999999999998887776544333345689999999999999999999999999
Q ss_pred HHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (502)
Q Consensus 180 i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 259 (502)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 245 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA 245 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 8889999999999999999999999999999987
Q ss_pred cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (502)
Q Consensus 260 ~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~ 339 (502)
+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 246 -~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 324 (495)
T 3b4w_A 246 -EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPA 324 (495)
T ss_dssp -HTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTT
T ss_pred -hcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEA 417 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 417 (502)
+++||+++..+++++.+++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 325 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 404 (495)
T 3b4w_A 325 AQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDA 404 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHH
Confidence 9999999999999999999999999999999997643 26899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecC
Q 010735 418 IKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 418 i~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
|+++|+++|||++||||+|.++++++++++++|+|+||+++ ..+.+||||+|.||+|+++|++|+++|++.|+|++++.
T Consensus 405 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~~ 483 (495)
T 3b4w_A 405 IAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPMG 483 (495)
T ss_dssp HHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCTT
T ss_pred HHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEccC
Confidence 99999999999999999999999999999999999999987 77899999999999999999999999999999988754
No 10
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=2.1e-104 Score=832.46 Aligned_cols=478 Identities=54% Similarity=0.948 Sum_probs=451.3
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+++ .|+.++..+|.++|++++++|++|
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 99 (501)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 3468999999987667899999999999999999999999999999999999721 399999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhh
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (502)
.++|++++++|+|||+.++...|+..+++.+++++.++++..+...+...+...+++++|+|||++|+|||||+...+++
T Consensus 100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (501)
T 1bxs_A 100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK 179 (501)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHH
Confidence 99999999999999999776789999999999999998877665444334445689999999999999999999999999
Q ss_pred HHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (502)
Q Consensus 180 i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 259 (502)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 259 (501)
T 1bxs_A 180 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG 259 (501)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999977788999999999999999999999999999876
Q ss_pred cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (502)
Q Consensus 260 ~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~ 339 (502)
.+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|++
T Consensus 260 ~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 339 (501)
T 1bxs_A 260 KSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG 339 (501)
T ss_dssp HTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred hccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 419 (502)
+++||+++..+++++.+++++++++|+++++||......|+|+.|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 340 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 419 (501)
T 1bxs_A 340 VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIK 419 (501)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999976534699999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecCC
Q 010735 420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFN 498 (502)
Q Consensus 420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~ 498 (502)
++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|.+++..
T Consensus 420 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~~~ 498 (501)
T 1bxs_A 420 RANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKISQ 498 (501)
T ss_dssp HHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECSC
T ss_pred HHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEccCC
Confidence 9999999999999999999999999999999999999877778999999999999999999999999999999887643
No 11
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1e-104 Score=836.95 Aligned_cols=479 Identities=44% Similarity=0.751 Sum_probs=451.8
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccC---CCCCCCHHHHHHHHHHHHHH
Q 010735 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG---PWPRFSGAERRGIMLKFADL 95 (502)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~---~w~~~~~~~R~~~L~~~a~~ 95 (502)
.+..++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+++ .|+.++..+|.++|++++++
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 445679999999988778899999999999999999999999999999999999721 49999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCee-eec---ccccccceeecCCeEEEEEcCCCh
Q 010735 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKM---SRALQGYTLREPIGVVGHIIPWNF 171 (502)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~n~ 171 (502)
|++|.++|++++++|+|||..++ ..|+..+++.+++++.+++++.+.. .+. ..+...++.++|+|||++|+||||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 163 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence 99999999999999999999976 5799999999999999887665432 111 134567899999999999999999
Q ss_pred hHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHH
Q 010735 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251 (502)
Q Consensus 172 P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g 251 (502)
|+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||++|.|+||||+.+|
T Consensus 164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 243 (503)
T 3iwj_A 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243 (503)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccc
Q 010735 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (502)
Q Consensus 252 ~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~ 331 (502)
+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 244 ~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 322 (503)
T 3iwj_A 244 SKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIK 322 (503)
T ss_dssp HHHHHHHG-GGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHh-cCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhcc
Confidence 99999987 78999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccceeeceEEEE
Q 010735 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (502)
Q Consensus 332 ~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 409 (502)
+|+|.++++++||++++.+++++.+++++++.+|+++++||.... .+|+|+.|||+.+++++|++++||+||||++|+
T Consensus 323 ~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 402 (503)
T 3iwj_A 323 ISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVK 402 (503)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEE
Confidence 999999999999999999999999999999999999999997654 479999999999999999999999999999999
Q ss_pred EeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhc
Q 010735 410 KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQV 489 (502)
Q Consensus 410 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~ 489 (502)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.
T Consensus 403 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~ 482 (503)
T 3iwj_A 403 TFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSV 482 (503)
T ss_dssp EESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEE
T ss_pred EeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCe
Confidence 99999999999999999999999999999999999999999999999877788999999999999999999999999999
Q ss_pred cEEEEecCCC
Q 010735 490 KSVVTPIFNS 499 (502)
Q Consensus 490 k~v~~~~~~~ 499 (502)
|+|+++....
T Consensus 483 k~v~~~~~~~ 492 (503)
T 3iwj_A 483 KQVTQYISEE 492 (503)
T ss_dssp EEEEEECCSS
T ss_pred EEEEEeCCCC
Confidence 9999876543
No 12
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=4.1e-105 Score=838.69 Aligned_cols=477 Identities=34% Similarity=0.587 Sum_probs=452.1
Q ss_pred cccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 010735 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (502)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (502)
+....++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 86 (497)
T 3k2w_A 9 HFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKIR 86 (497)
T ss_dssp CCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHH
T ss_pred cccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 34556899999999987788999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhh
Q 010735 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (502)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (502)
++.++|++++++|+|||..++. .|+..+++.+++++.++++..+...+. ..+...++.++|+|||++|+|||||+...
T Consensus 87 ~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 165 (497)
T 3k2w_A 87 ENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALA 165 (497)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHH
Confidence 9999999999999999999764 799999999999999988876655443 24556789999999999999999999999
Q ss_pred hhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (502)
Q Consensus 177 ~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 256 (502)
++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.++++.|+.||+||.|+||||+.+|+.|++
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~ 245 (497)
T 3k2w_A 166 GRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYK 245 (497)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987789999999999999999999999999999
Q ss_pred HHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCC
Q 010735 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (502)
Q Consensus 257 ~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~ 336 (502)
.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 246 ~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~ 324 (497)
T 3k2w_A 246 TSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPM 324 (497)
T ss_dssp HHT-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred Hhh-hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 987 7899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcc--cCC--CCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP--IGK--KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~--~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
++++++||+++..+++++.+++++++.+|+++++||.. ... +|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus 325 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 404 (497)
T 3k2w_A 325 DADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVS 404 (497)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeC
Confidence 99999999999999999999999999999999999973 222 68999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v 492 (502)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|
T Consensus 405 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v 484 (497)
T 3k2w_A 405 SMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484 (497)
T ss_dssp CHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEE
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred EEecCC
Q 010735 493 VTPIFN 498 (502)
Q Consensus 493 ~~~~~~ 498 (502)
.+++..
T Consensus 485 ~~~~~~ 490 (497)
T 3k2w_A 485 YINEAE 490 (497)
T ss_dssp EEECCC
T ss_pred EEEccc
Confidence 988753
No 13
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=9.8e-105 Score=836.55 Aligned_cols=481 Identities=42% Similarity=0.733 Sum_probs=458.8
Q ss_pred CCcccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHH
Q 010735 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95 (502)
Q Consensus 16 ~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~ 95 (502)
|+|++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++
T Consensus 1 ~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~ 78 (490)
T 2ve5_A 1 MARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDI 78 (490)
T ss_dssp -CCSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHH
T ss_pred CCccccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHH
Confidence 4677888999999999887788999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHh
Q 010735 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTM 175 (502)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (502)
|+++.++|++++++|+|||..++...|+..+++.++++++++++..+...+...+...+++++|+|||++|+|||||+..
T Consensus 79 l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~ 158 (490)
T 2ve5_A 79 LRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQI 158 (490)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECCCcchHHH
Confidence 99999999999999999999986545999999999999999887766655544566788999999999999999999999
Q ss_pred hhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHH
Q 010735 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (502)
Q Consensus 176 ~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 255 (502)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|+++++++++.++++.|+.||+||.|+||||+.+|+.|+
T Consensus 159 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~ 238 (490)
T 2ve5_A 159 ALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238 (490)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred HHH-hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCC
Q 010735 256 QAA-ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (502)
Q Consensus 256 ~~a-a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~ 334 (502)
+.+ + +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+
T Consensus 239 ~~a~a-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 317 (490)
T 2ve5_A 239 ASASS-SSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGD 317 (490)
T ss_dssp HHHHH-HHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred Hhchh-ccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 998 6 78999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccceeeceEEEEE
Q 010735 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410 (502)
Q Consensus 335 ~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 410 (502)
|.++++++||+++..+++++.+++++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++
T Consensus 318 p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~ 397 (490)
T 2ve5_A 318 PQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 397 (490)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEE
Confidence 999999999999999999999999999999999999997632 3689999999999999999999999999999999
Q ss_pred eCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhcc
Q 010735 411 FKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490 (502)
Q Consensus 411 ~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k 490 (502)
|+|+||||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|.+++++|++.|
T Consensus 398 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k 477 (490)
T 2ve5_A 398 YDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIK 477 (490)
T ss_dssp ESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred eCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCCCCCCCCcchHHHHHHhheeE
Confidence 99999999999999999999999999999999999999999999998877899999999999999999999999999999
Q ss_pred EEEEecCCC
Q 010735 491 SVVTPIFNS 499 (502)
Q Consensus 491 ~v~~~~~~~ 499 (502)
+|+++.++.
T Consensus 478 ~v~~~~~~~ 486 (490)
T 2ve5_A 478 SVQVELGDY 486 (490)
T ss_dssp EEEEECSCC
T ss_pred EEEEccCcC
Confidence 999987654
No 14
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=1.5e-104 Score=834.85 Aligned_cols=481 Identities=38% Similarity=0.681 Sum_probs=453.4
Q ss_pred CCCcccccceeEcCeEeeCCCCCe-EEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 010735 15 KMPEIKFTKLFINGEFVDSVSGKT-FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFA 93 (502)
Q Consensus 15 ~~~~~~~~~~~i~G~~~~~~~~~~-~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a 93 (502)
+.......++||||+|+.+.++.+ ++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++
T Consensus 13 ~~~~~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a 90 (503)
T 1a4s_A 13 GSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAA 90 (503)
T ss_dssp TTCCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHH
T ss_pred CCccccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHH
Confidence 333445567899999998766678 99999999999999999999999999999999999 899999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhH
Q 010735 94 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPT 173 (502)
Q Consensus 94 ~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~ 173 (502)
++|+++.++|++++++|+|||+.++ ..|+..+++.+++++.++++..+...+...+...++.++|+|||++|+|||||+
T Consensus 91 ~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 169 (503)
T 1a4s_A 91 RIIRERRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPF 169 (503)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchH
Confidence 9999999999999999999999976 579999999999999998877665444333445689999999999999999999
Q ss_pred HhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHH
Q 010735 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (502)
Q Consensus 174 ~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~ 253 (502)
...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+ ++++.|+.||+||+|+||||+.+|+.
T Consensus 170 ~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~ 248 (503)
T 1a4s_A 170 MIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKK 248 (503)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977 88999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccC
Q 010735 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (502)
Q Consensus 254 i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (502)
|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 249 i~~~aa-~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 327 (503)
T 1a4s_A 249 VMEMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVG 327 (503)
T ss_dssp HHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBS
T ss_pred HHHHhh-hcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCC
Confidence 999988 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc--C----CCCceEecEEEeeCCCCCcccccceeeceEE
Q 010735 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--G----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 407 (502)
Q Consensus 334 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~--~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 407 (502)
+|.++++++||+++..+++++.+++++++.+|+++++||... . ..|+|++|||+.+++++|++++||+||||++
T Consensus 328 ~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 407 (503)
T 1a4s_A 328 DPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMS 407 (503)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred CCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEE
Confidence 999999999999999999999999999999999999999764 2 2589999999999999999999999999999
Q ss_pred EEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhh
Q 010735 408 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 487 (502)
Q Consensus 408 v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~ 487 (502)
|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|+
T Consensus 408 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~ 487 (503)
T 1a4s_A 408 VLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYS 487 (503)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSE
T ss_pred EEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999998777789999999999999999999999999
Q ss_pred hccEEEEecCCCC
Q 010735 488 QVKSVVTPIFNSP 500 (502)
Q Consensus 488 ~~k~v~~~~~~~~ 500 (502)
+.|+|++++++.+
T Consensus 488 ~~k~v~~~~~~~~ 500 (503)
T 1a4s_A 488 QLKTVIVEMGDVD 500 (503)
T ss_dssp EEEEEEECCSCCC
T ss_pred CceEEEEccCCCC
Confidence 9999998876543
No 15
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=3.3e-104 Score=830.25 Aligned_cols=474 Identities=35% Similarity=0.578 Sum_probs=443.0
Q ss_pred CCCCcccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 010735 14 FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFA 93 (502)
Q Consensus 14 ~~~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a 93 (502)
....|+...++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++
T Consensus 18 ~~~~m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a 95 (497)
T 3i44_A 18 GPGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKIL 95 (497)
T ss_dssp ----CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHH
T ss_pred CCcccccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHH
Confidence 345566677899999999987778999999999999999999999999999999999999 899999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeeccccccccee-ecCCeEEEEEcCCChh
Q 010735 94 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL-REPIGVVGHIIPWNFP 172 (502)
Q Consensus 94 ~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~n~P 172 (502)
++|+++.++|++++++|+|||+.++...|+..+++.+++++............ ..+...++. ++|+|||++|+|||||
T Consensus 96 ~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P 174 (497)
T 3i44_A 96 EIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGVVGLITPWNWP 174 (497)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceEEEEECCCcch
Confidence 99999999999999999999999875489999999999998876554322211 124457788 9999999999999999
Q ss_pred HHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHH
Q 010735 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252 (502)
Q Consensus 173 ~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~ 252 (502)
+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.++++.|+.||+||.|+||||+.+|+
T Consensus 175 ~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~ 254 (497)
T 3i44_A 175 MNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGK 254 (497)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc
Q 010735 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (502)
Q Consensus 253 ~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (502)
.|++.++ +++||+++|+|||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 255 ~i~~~aa-~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 332 (497)
T 3i44_A 255 DISKNAS-NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQV 332 (497)
T ss_dssp HHHHHHH-TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHh-hcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccC
Confidence 9999987 88999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc-ccC--CCCceEecEEEeeCCCCCcccccceeeceEEEE
Q 010735 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (502)
Q Consensus 333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 409 (502)
|+|.|+++++||++++.+++++.+++++++.+|+++++||. ... ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 333 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 412 (497)
T 3i44_A 333 GPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLL 412 (497)
T ss_dssp CCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEE
Confidence 99999999999999999999999999999999999999994 322 269999999999999999999999999999999
Q ss_pred EeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhc
Q 010735 410 KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQV 489 (502)
Q Consensus 410 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~ 489 (502)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||. ....+.+||||+|.||+|+++|++|+++|++.
T Consensus 413 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~ 491 (497)
T 3i44_A 413 PFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDT 491 (497)
T ss_dssp EESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEE
T ss_pred ecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcce
Confidence 99999999999999999999999999999999999999999999995 55668899999999999999999999999999
Q ss_pred cEEE
Q 010735 490 KSVV 493 (502)
Q Consensus 490 k~v~ 493 (502)
|+|+
T Consensus 492 K~v~ 495 (497)
T 3i44_A 492 KAIS 495 (497)
T ss_dssp EEES
T ss_pred eEEE
Confidence 9874
No 16
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=1.6e-104 Score=833.13 Aligned_cols=476 Identities=54% Similarity=0.894 Sum_probs=449.9
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHhH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIEEHA 100 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (502)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+++ .|+.++..+|.++|++++++|++|.
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 458999999987667899999999999999999999999999999999999720 3999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
++|++++++|+|||+.++...|+..+++.+++++.++++..+...+...+...+++++|+|||++|+|||||+...++++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 179 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHH
Confidence 99999999999999997767899999999999999888776654443334456899999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||.|+||||+.+|+.|++.++.
T Consensus 180 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 259 (500)
T 1o04_A 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259 (500)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999777899999999999999999999999999998764
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 340 (502)
+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 260 ~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp TTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred hcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 420 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 420 (502)
++||+++..+++++.+++++++++|+++++||......|+|+.|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 340 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 419 (500)
T 1o04_A 340 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGR 419 (500)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999765346999999999999999999999999999999999999999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecC
Q 010735 421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
+|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|.+++.
T Consensus 420 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~~ 496 (500)
T 1o04_A 420 ANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVP 496 (500)
T ss_dssp HHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEECS
T ss_pred HhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEecC
Confidence 99999999999999999999999999999999999987777899999999999999999999999999999988754
No 17
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.6e-105 Score=840.53 Aligned_cols=473 Identities=39% Similarity=0.677 Sum_probs=451.0
Q ss_pred CcccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 010735 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (502)
Q Consensus 17 ~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l 96 (502)
.|++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|
T Consensus 10 ~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l 87 (517)
T 3r31_A 10 KAQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIM 87 (517)
T ss_dssp TTCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred hcccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHH
Confidence 356677899999999887888999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhh----hcCeeeecccccccceeecCCeEEEEEcCCChh
Q 010735 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK----IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFP 172 (502)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P 172 (502)
+++.++|++++++|+|||..++ |+..+++.+++++.++++ +.+...+...+. .+++++|+|||++|+|||||
T Consensus 88 ~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P 163 (517)
T 3r31_A 88 RERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYP 163 (517)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcch
Confidence 9999999999999999999975 999999999999998877 666655544455 89999999999999999999
Q ss_pred HHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHH
Q 010735 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252 (502)
Q Consensus 173 ~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~ 252 (502)
+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.++++.|+.||+||.|+||||+.+|+
T Consensus 164 ~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~ 242 (517)
T 3r31_A 164 QQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGR 242 (517)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 778999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc
Q 010735 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (502)
Q Consensus 253 ~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (502)
.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 243 ~i~~~aa-~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 321 (517)
T 3r31_A 243 KVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMIL 321 (517)
T ss_dssp HHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred HHHHHhh-cCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccC
Confidence 9999987 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccceeeceEEEE
Q 010735 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (502)
Q Consensus 333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 409 (502)
|+|.++++++||++++.+++++.++|++++++|+++++||.... .+|+|+.|||+.+++++|++++||+||||++|+
T Consensus 322 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 401 (517)
T 3r31_A 322 GDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVL 401 (517)
T ss_dssp CCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEE
T ss_pred CCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEE
Confidence 99999999999999999999999999999999999999993121 369999999999999999999999999999999
Q ss_pred EeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhc
Q 010735 410 KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQV 489 (502)
Q Consensus 410 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~ 489 (502)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||+|.||+|+++|++|+++|++.
T Consensus 402 ~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~ 481 (517)
T 3r31_A 402 DFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSEL 481 (517)
T ss_dssp EECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEE
T ss_pred EeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhce
Confidence 99999999999999999999999999999999999999999999999887889999999999999999999999999999
Q ss_pred cEEEEecC
Q 010735 490 KSVVTPIF 497 (502)
Q Consensus 490 k~v~~~~~ 497 (502)
|+|+++..
T Consensus 482 K~v~~~~~ 489 (517)
T 3r31_A 482 KTVYVSTG 489 (517)
T ss_dssp EEEEECCC
T ss_pred EEEEEcCC
Confidence 99988764
No 18
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=3.8e-104 Score=831.29 Aligned_cols=469 Identities=32% Similarity=0.520 Sum_probs=444.8
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
...++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 87 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEER 87 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 345789999999887788999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc--c----ccccceeecCCeEEEEEcCCChhH
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--R----ALQGYTLREPIGVVGHIIPWNFPT 173 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~P~Gvv~~i~p~n~P~ 173 (502)
.++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. . +...++.++|+|||++|+|||||+
T Consensus 88 ~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~ 166 (505)
T 3prl_A 88 KEIIGELIMHEVAKPKKSA-IGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPV 166 (505)
T ss_dssp HHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTT
T ss_pred HHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHH
Confidence 9999999999999999976 46999999999999998887766544432 1 345688999999999999999999
Q ss_pred HhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHH
Q 010735 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (502)
Q Consensus 174 ~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~ 253 (502)
...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|+.||+||.|+||||+.+|+.
T Consensus 167 ~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 246 (505)
T 3prl_A 167 NLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER 246 (505)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987889999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccC
Q 010735 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (502)
Q Consensus 254 i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (502)
|++.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 247 i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 247 ISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 999864 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCC
Q 010735 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT 413 (502)
Q Consensus 334 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 413 (502)
+|. +++++||+++..+++++.+++++++.+|+++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+|
T Consensus 324 ~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~ 399 (505)
T 3prl_A 324 SPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKD 399 (505)
T ss_dssp CTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCC
Confidence 999 9999999999999999999999999999999999974 689999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735 414 VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492 (502)
Q Consensus 414 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v 492 (502)
+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|
T Consensus 400 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v 479 (505)
T 3prl_A 400 ANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVT 479 (505)
T ss_dssp HHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEE
T ss_pred HHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEE
Confidence 9999999999999999999999999999999999999999999876 458899999999999999999999999999999
Q ss_pred EEecCC
Q 010735 493 VTPIFN 498 (502)
Q Consensus 493 ~~~~~~ 498 (502)
++++..
T Consensus 480 ~~~~~~ 485 (505)
T 3prl_A 480 VLNLAE 485 (505)
T ss_dssp EEEC--
T ss_pred EEeCCC
Confidence 987653
No 19
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=6.5e-104 Score=832.25 Aligned_cols=472 Identities=42% Similarity=0.698 Sum_probs=448.9
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.+
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 104 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHAD 104 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999876678999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
+|++++++|+|||..++. .|+..+++.+++++.++++..+...+. ..+...+++++|+|||++|+|||||+...++++
T Consensus 105 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 183 (515)
T 2d4e_A 105 ELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI 183 (515)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhh
Confidence 999999999999999765 899999999999999888776665443 234456889999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 184 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa- 262 (515)
T 2d4e_A 184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA- 262 (515)
T ss_dssp HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG-
T ss_pred hHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999977788999999999999999999999999999987
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 340 (502)
+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus 263 ~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 342 (515)
T 2d4e_A 263 DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPET 342 (515)
T ss_dssp GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred hcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--------CCCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|++|+
T Consensus 343 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~ 421 (515)
T 2d4e_A 343 EVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFK 421 (515)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeC
Confidence 999999999999999999999999999999997643 2699999999999 9999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 492 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v 492 (502)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|
T Consensus 422 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v 501 (515)
T 2d4e_A 422 DEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTI 501 (515)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEE
T ss_pred CHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCceeEE
Confidence 99999999999999999999999999999999999999999999877778999999999999999999999999999999
Q ss_pred EEecCC
Q 010735 493 VTPIFN 498 (502)
Q Consensus 493 ~~~~~~ 498 (502)
++++..
T Consensus 502 ~~~~~~ 507 (515)
T 2d4e_A 502 ALPLRP 507 (515)
T ss_dssp EEESSC
T ss_pred EEcCCC
Confidence 987653
No 20
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=4.7e-104 Score=828.46 Aligned_cols=475 Identities=33% Similarity=0.572 Sum_probs=449.0
Q ss_pred CcccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 010735 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (502)
Q Consensus 17 ~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l 96 (502)
+.....++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|
T Consensus 2 ~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 79 (479)
T 2imp_A 2 SVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGI 79 (479)
T ss_dssp -CCEECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CCCcccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHH
Confidence 344556789999999876678999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHh
Q 010735 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTM 175 (502)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (502)
+++.++|++++++|+|||+.++ ..|+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+|||||+..
T Consensus 80 ~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 158 (479)
T 2imp_A 80 RERASEISALIVEEGGKIQQLA-EVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFL 158 (479)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHH
Confidence 9999999999999999999976 47999999999999998877666544432 334568999999999999999999999
Q ss_pred hhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHH
Q 010735 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (502)
Q Consensus 176 ~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 255 (502)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++++++|++.++++.|+.||++|.|.||||+.+|+.|+
T Consensus 159 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 238 (479)
T 2imp_A 159 IARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 238 (479)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997777899999999999999999999999999
Q ss_pred HHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCC
Q 010735 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (502)
Q Consensus 256 ~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~ 335 (502)
+.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 239 ~~aa-~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 317 (479)
T 2imp_A 239 ATAA-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP 317 (479)
T ss_dssp HHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHh-ccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCc
Confidence 9988 889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCH
Q 010735 336 FD-PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV 414 (502)
Q Consensus 336 ~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 414 (502)
.+ +++++|||+++.+++++.+++++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 318 ~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~ 397 (479)
T 2imp_A 318 AERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTL 397 (479)
T ss_dssp TTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSH
T ss_pred cccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCH
Confidence 99 99999999999999999999999999999999999764336899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 415 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 415 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
||||+++|+++|||+++|||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 398 ~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~ 477 (479)
T 2imp_A 398 EDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 477 (479)
T ss_dssp HHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEe
Confidence 99999999999999999999999999999999999999999987777899999999999999999999999999999976
Q ss_pred e
Q 010735 495 P 495 (502)
Q Consensus 495 ~ 495 (502)
+
T Consensus 478 ~ 478 (479)
T 2imp_A 478 Q 478 (479)
T ss_dssp E
T ss_pred c
Confidence 5
No 21
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=8e-104 Score=827.13 Aligned_cols=471 Identities=37% Similarity=0.650 Sum_probs=449.7
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (502)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 86 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEHQ 86 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999987789999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhhh
Q 010735 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (502)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (502)
++|++++++|+|||..++ ..|+..+++.+++++.+..+..+...+.. .+...+++++|+|||++|+|||||+...+++
T Consensus 87 ~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 165 (481)
T 3jz4_A 87 DDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK 165 (481)
T ss_dssp HHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence 999999999999999975 57999999999999988877655544432 3556789999999999999999999999999
Q ss_pred HHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (502)
Q Consensus 180 i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 259 (502)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa 245 (481)
T 3jz4_A 166 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA 245 (481)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999987
Q ss_pred cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (502)
Q Consensus 260 ~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~ 339 (502)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 246 -~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 246 -KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp -TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred -hcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 419 (502)
+++||++++.+++++.+++++++.+|+++++||......|+|+.|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 325 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 404 (481)
T 3jz4_A 325 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIA 404 (481)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHH
Confidence 99999999999999999999999999999999987544689999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+|++.
T Consensus 405 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 405 QANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 9999999999999999999999999999999999999887888999999999999999999999999999999875
No 22
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=8.5e-104 Score=826.76 Aligned_cols=470 Identities=37% Similarity=0.632 Sum_probs=445.3
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
...++||||+|+.+.+ .+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 22 ~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 98 (495)
T 1wnd_A 22 MQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEEN 98 (495)
T ss_dssp CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHH
Confidence 3357899999998655 8899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (502)
.++|++++++|+|||..++...|+..+++.+++++.++++..++..+.. .+...++.++|+|||++|+|||||+...++
T Consensus 99 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 178 (495)
T 1wnd_A 99 GQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAW 178 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHH
Confidence 9999999999999999976544999999999999998877765544432 334568899999999999999999999999
Q ss_pred hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (502)
Q Consensus 179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 258 (502)
++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.++++.|+.||+||.|+||||+.+|+.|++.+
T Consensus 179 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 257 (495)
T 1wnd_A 179 KLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHT 257 (495)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999997778899999999999999999999999999998
Q ss_pred hcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCC
Q 010735 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (502)
Q Consensus 259 a~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~ 338 (502)
+ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus 258 a-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 336 (495)
T 1wnd_A 258 A-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDE 336 (495)
T ss_dssp G-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTST
T ss_pred H-hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccC
Confidence 7 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCc-ccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHH
Q 010735 339 AVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGK-PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEE 416 (502)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~-~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 416 (502)
++++|||+++.+++++.+++++++++| +++++||. ... .|+|+.|||+.+++++|++++||+||||++|++|+|+||
T Consensus 337 ~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 415 (495)
T 1wnd_A 337 STELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG-NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQ 415 (495)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSS-SSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred CCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCC-CCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHH
Confidence 999999999999999999999999999 99999997 532 699999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 417 AIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 417 ai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|+++
T Consensus 416 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 416 VVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 9999999999999999999999999999999999999999877778999999999999999999999999999999775
No 23
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.7e-104 Score=832.77 Aligned_cols=477 Identities=30% Similarity=0.454 Sum_probs=448.0
Q ss_pred CCcccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHH
Q 010735 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95 (502)
Q Consensus 16 ~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~ 95 (502)
.+|+...++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++
T Consensus 21 ~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~ 98 (521)
T 4e4g_A 21 QSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQL 98 (521)
T ss_dssp ---CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHH
T ss_pred hhhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHH
Confidence 3456677899999999887788999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHH
Q 010735 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTT 174 (502)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~ 174 (502)
|+++.++|++++++|+|||..++ ..|+..+++.+++++.+.+.+.+...+. ..+...++.++|+|||++|+|||||+.
T Consensus 99 l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 177 (521)
T 4e4g_A 99 LNDNMNELAEMLSREHGKTIDDA-KGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGM 177 (521)
T ss_dssp HHHHHHHHHHHHHHHHCSCHHHH-HHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHH
Confidence 99999999999999999999976 5799999999999998777665554332 244567899999999999999999999
Q ss_pred hhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHH
Q 010735 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (502)
Q Consensus 175 ~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i 254 (502)
..++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|+ .+.++.|+.||+||.|+||||+.+|+.|
T Consensus 178 ~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i 256 (521)
T 4e4g_A 178 IPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYV 256 (521)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999994 4567999999999999999999999999
Q ss_pred HHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecc-cHHHHHHHHHHHHhccccC
Q 010735 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVG 333 (502)
Q Consensus 255 ~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~-i~~~f~~~l~~~~~~~~~g 333 (502)
++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++|
T Consensus 257 ~~~aa-~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG 335 (521)
T 4e4g_A 257 YGTAA-MNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIG 335 (521)
T ss_dssp HHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBC
T ss_pred HHHHh-hcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCC
Confidence 99987 789999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc----CCCCceEecEEEeeCCCCCcccccceeeceEEEE
Q 010735 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (502)
Q Consensus 334 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 409 (502)
+|.++++++||+++..+++++.+++++++.+|+++++||... ..+|+|+.|||+.+++++|++++||+||||++|+
T Consensus 336 ~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 415 (521)
T 4e4g_A 336 PYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVV 415 (521)
T ss_dssp CTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEC
T ss_pred CCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEE
Confidence 999999999999999999999999999999999999999753 1479999999999999999999999999999999
Q ss_pred EeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCC--CcchHHHHHhh
Q 010735 410 KFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFG--RDCGLESLHNY 486 (502)
Q Consensus 410 ~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g--~~~g~~~~~~~ 486 (502)
+|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++... .+.+||||+|.||+| +++|++|+++|
T Consensus 416 ~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~f 495 (521)
T 4e4g_A 416 RARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFW 495 (521)
T ss_dssp CBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHT
T ss_pred EeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHh
Confidence 999999999999999999999999999999999999999999999998654 478999999999999 79999999999
Q ss_pred hhccEEEEecC
Q 010735 487 LQVKSVVTPIF 497 (502)
Q Consensus 487 ~~~k~v~~~~~ 497 (502)
++.|+|++++.
T Consensus 496 t~~K~v~~~~~ 506 (521)
T 4e4g_A 496 TRTKTITSRWP 506 (521)
T ss_dssp EEEEEEEECCC
T ss_pred heEEEEEEecC
Confidence 99999998765
No 24
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=1.7e-103 Score=831.46 Aligned_cols=472 Identities=32% Similarity=0.550 Sum_probs=445.9
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
..++||||+|+. ++.+++++||+| |+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRR 112 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999997 678999999999 999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHh-hhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhh
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA-ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (502)
.++|++++++|+|||..++. .|+..+++.+++++.+ .+...+...+...+...++.++|+|||++|+|||||+...++
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 191 (538)
T 3qan_A 113 KHEFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVG 191 (538)
T ss_dssp HHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence 99999999999999999764 5999999999999998 555555555443456788999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHH
Q 010735 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (502)
Q Consensus 179 ~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 258 (502)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+||.|+||||+.+|+.|++.+
T Consensus 192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 271 (538)
T 3qan_A 192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271 (538)
T ss_dssp HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998778999999999999999999999999999998
Q ss_pred hcCC------CCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc
Q 010735 259 ATSN------LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (502)
Q Consensus 259 a~~~------~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (502)
+ .+ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 272 a-~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 272 A-VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp T-SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred h-hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 7 66 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
|+|.++++++||+++..+++++.+++++++.+| ++++||......|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus 351 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 429 (538)
T 3qan_A 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN 429 (538)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999998754479999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEc-CcCCC-CCCCCcCCCCCCCCC-CcchHHHHHhhhhc
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN-CYFAF-DSDCPYGGYKMSGFG-RDCGLESLHNYLQV 489 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN-~~~~~-~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~ 489 (502)
|+||||+++|+++|||++||||+|.++++++++++++|+|+|| .+... .+.+||||+|.||+| +++|++|+++|++.
T Consensus 430 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~ 509 (538)
T 3qan_A 430 DFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQA 509 (538)
T ss_dssp SHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCe
Confidence 9999999999999999999999999999999999999999999 55444 789999999999999 99999999999999
Q ss_pred cEEEEecCCC
Q 010735 490 KSVVTPIFNS 499 (502)
Q Consensus 490 k~v~~~~~~~ 499 (502)
|+|+++....
T Consensus 510 k~v~~~~~~~ 519 (538)
T 3qan_A 510 KTVSEMYAEN 519 (538)
T ss_dssp EEEEEEC---
T ss_pred EEEEEecCCc
Confidence 9999887543
No 25
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1e-102 Score=822.70 Aligned_cols=472 Identities=34% Similarity=0.540 Sum_probs=432.6
Q ss_pred cccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 010735 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (502)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (502)
..+..++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 86 (508)
T 3r64_A 9 GIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELLE 86 (508)
T ss_dssp TBCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred CccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHH
Confidence 35667899999999887788999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc--cccccceeecCCeEEEEEcCCChhHHh
Q 010735 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--RALQGYTLREPIGVVGHIIPWNFPTTM 175 (502)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (502)
++.++|++++++|+|||..++ ..|+..+++.+++++.+.++..+ ..+.. .+...++.++|+|||++|+|||||+..
T Consensus 87 ~~~~ela~~~~~e~Gk~~~~a-~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 164 (508)
T 3r64_A 87 EHREEIVEWLIKESGSTRSKA-NLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNL 164 (508)
T ss_dssp HTHHHHHHHHHHTSCCCHHHH-HHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHH
Confidence 999999999999999999976 45999999999999998877655 44432 346678999999999999999999999
Q ss_pred hhhhHHHHHHcCCeEEEecCCCcHHHH-HHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHH
Q 010735 176 FFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (502)
Q Consensus 176 ~~~~i~~ALaaGN~vv~kps~~~~~~~-~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i 254 (502)
.++++++||++||+||+|||+.+|+++ .++++++.++|+|+|++++++|++.++++.|+.||++|.|+||||+.+|+.|
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i 244 (508)
T 3r64_A 165 SIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRV 244 (508)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999999777899999999999999999999999999
Q ss_pred HHHHhcC--CCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc
Q 010735 255 MQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (502)
Q Consensus 255 ~~~aa~~--~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (502)
++.++ . ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 245 ~~~aa-~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (508)
T 3r64_A 245 GELAI-NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT 323 (508)
T ss_dssp HHHHH-SSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred HHHhh-cccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence 99987 6 78999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
|+|.++++++||++++.+++++++++++++.+|+++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus 324 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (508)
T 3r64_A 324 GDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400 (508)
T ss_dssp SCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEES
T ss_pred CCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeC
Confidence 999999999999999999999999999999999999999975 68999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCCCcchHHHHHhhhhccE
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKS 491 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~ 491 (502)
|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|++|+++|++.|+
T Consensus 401 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~ 480 (508)
T 3r64_A 401 DEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRW 480 (508)
T ss_dssp SHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEE
T ss_pred CHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEE
Confidence 999999999999999999999999999999999999999999998754 6889999999999999999999999999999
Q ss_pred EEEecC
Q 010735 492 VVTPIF 497 (502)
Q Consensus 492 v~~~~~ 497 (502)
|+++..
T Consensus 481 v~~~~~ 486 (508)
T 3r64_A 481 IGIKRS 486 (508)
T ss_dssp EEEECC
T ss_pred EEEecc
Confidence 998764
No 26
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=9e-103 Score=820.65 Aligned_cols=474 Identities=28% Similarity=0.462 Sum_probs=426.8
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|++
T Consensus 4 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 81 (485)
T 4dng_A 4 ETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHE 81 (485)
T ss_dssp GGCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHH
Confidence 4456899999999877788999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc--cccccceeecCCeEEEEEcCCChhHHhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--RALQGYTLREPIGVVGHIIPWNFPTTMF 176 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (502)
+.++|++++++|+|||+.++. .|+..+++.+++++.+.+++.+...+.. .+...+++++|+|||++|+|||||+...
T Consensus 82 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 160 (485)
T 4dng_A 82 NRDDIIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLS 160 (485)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHH
Confidence 999999999999999999865 5999999999999998887766554432 3466789999999999999999999999
Q ss_pred hhhHHHHHHcCCeEEEecCCCcHHHH-HHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHH
Q 010735 177 FMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (502)
Q Consensus 177 ~~~i~~ALaaGN~vv~kps~~~~~~~-~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 255 (502)
++++++||++||+||+|||+.+|+++ .++.+++.++|+|+|++|++++++.++++.|+.||++|.|.||||+.+|+.|+
T Consensus 161 ~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~ 240 (485)
T 4dng_A 161 MRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIG 240 (485)
T ss_dssp HHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999998777899999999999999999999999999
Q ss_pred HHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCC
Q 010735 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (502)
Q Consensus 256 ~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~ 335 (502)
+.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 241 ~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~ 319 (485)
T 4dng_A 241 EIAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQ 319 (485)
T ss_dssp HHHH-HHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHHh-hhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 9987 788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHH
Q 010735 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE 415 (502)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 415 (502)
.++++++||+++..+++++.+++++++.+|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 320 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ 396 (485)
T 4dng_A 320 TDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQ 396 (485)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHH
T ss_pred CcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHH
Confidence 999999999999999999999999999999999999975 68999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 416 EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 416 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 397 eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~ 476 (485)
T 4dng_A 397 EAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISI 476 (485)
T ss_dssp HHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEE
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999999999999999998754 6889999999999999999999999999999998
Q ss_pred ecCCC
Q 010735 495 PIFNS 499 (502)
Q Consensus 495 ~~~~~ 499 (502)
++...
T Consensus 477 ~~~~~ 481 (485)
T 4dng_A 477 QKQYR 481 (485)
T ss_dssp EC---
T ss_pred ecCCc
Confidence 87543
No 27
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=2.1e-102 Score=814.48 Aligned_cols=460 Identities=31% Similarity=0.534 Sum_probs=430.9
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 010735 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (502)
Q Consensus 24 ~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (502)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999974 45 99999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHH
Q 010735 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (502)
Q Consensus 104 ~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 183 (502)
++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. +...++.++|+|||++|+|||||+...++++++|
T Consensus 77 a~~~~~e~Gk~~~ea-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQA-RVEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 999999999999976 57999999999999998887766554433 5567899999999999999999999999999999
Q ss_pred HHcCCeEEEecCCCcHHHHHHHHHHHHHc----CCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHh
Q 010735 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (502)
Q Consensus 184 LaaGN~vv~kps~~~~~~~~~l~~~l~~a----GlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 259 (502)
|++||+||+|||+.+|+++..+++++.++ |+|+|++++++|++.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999987788999999999999999999999999999864
Q ss_pred cCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (502)
Q Consensus 260 ~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~ 339 (502)
+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 419 (502)
+++||+++..+++++.+++++++.+|+++++||.. .|+|+.|||+ +++++|++++||+||||++|++|+| ||||+
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~ 386 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMID 386 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHH
Confidence 99999999999999999999999999999999975 5899999999 9999999999999999999999999 99999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecCC
Q 010735 420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFN 498 (502)
Q Consensus 420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~ 498 (502)
++|+++|||++||||+|.++++++++++++|+|+||+++.+ .+.+||||+|.||+|+++|++|+++|++.|+|+++...
T Consensus 387 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~~ 466 (486)
T 3pqa_A 387 IANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKAE 466 (486)
T ss_dssp HHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC--
T ss_pred HHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCCc
Confidence 99999999999999999999999999999999999998653 46899999999999999999999999999999887643
No 28
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.8e-102 Score=814.62 Aligned_cols=455 Identities=27% Similarity=0.448 Sum_probs=436.5
Q ss_pred eEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Q 010735 38 TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW 117 (502)
Q Consensus 38 ~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 117 (502)
+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+|||..+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 589999999999999999999999999999999999 899999999999999999999999999999999999999997
Q ss_pred HhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCC
Q 010735 118 AKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197 (502)
Q Consensus 118 ~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~ 197 (502)
+. .|+..+++.+++++.++++..+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 83 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 65 79999999999999988877665544445567889999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceE
Q 010735 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (502)
Q Consensus 198 ~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~i 277 (502)
+|+++..|++++.++|+|+|++|+|+|++.++++ |+.||+||.|+||||+.+|+.|++.++ +++||+++|+|||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAG-KNLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHh-ccCCceEeecCCCCcce
Confidence 9999999999999999999999999998777788 999999999999999999999999987 78999999999999999
Q ss_pred EccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHH
Q 010735 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (502)
Q Consensus 278 V~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 357 (502)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 319 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQ 319 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCH
Q 010735 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437 (502)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~ 437 (502)
+++++.+|+++++||...+.+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 320 i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 399 (484)
T 3ros_A 320 VKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDI 399 (484)
T ss_dssp HHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCH
T ss_pred HHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 99999999999999986555899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecC
Q 010735 438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 438 ~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++.|+|+++..
T Consensus 400 ~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 400 DRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp HHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred HHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 999999999999999999987788999999999999999999999999999999988653
No 29
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=1.6e-102 Score=817.13 Aligned_cols=467 Identities=37% Similarity=0.624 Sum_probs=444.4
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
.++||||+|+.+. .+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|++|.+
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999753 7899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
+|++++++|+|||..++. .|+..+++.+++++.++++..+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus 89 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 999999999999999764 699999999999999888766665443 234567899999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEec---CCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP---GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~---g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++ |.+.++++.|+.||+||.|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 7667789999999999999999999999999999
Q ss_pred HhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhc-cccCCCC
Q 010735 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPF 336 (502)
Q Consensus 258 aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~~~ 336 (502)
++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.
T Consensus 248 aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 248 AA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HH-TTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hh-ccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 88 889999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCc-eEecEEEeeCCCCCcccccceeeceEEEEEeCCHH
Q 010735 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY-YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE 415 (502)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~-~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 415 (502)
++++++||+++..+++++.+++++++++|+++++||.... .|+ |++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 327 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~-~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~ 405 (487)
T 2w8n_A 327 EEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ-LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEE 405 (487)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCT-TCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHH
T ss_pred cccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC-CCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHH
Confidence 9999999999999999999999999999999999997643 688 99999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 416 EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 416 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++.|+|+++
T Consensus 406 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 406 EAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp HHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred HHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 99999999999999999999999999999999999999999887778899999999999999999999999999999775
No 30
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=3.7e-102 Score=813.31 Aligned_cols=467 Identities=32% Similarity=0.489 Sum_probs=441.3
Q ss_pred cccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 010735 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (502)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (502)
|.+.+++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+
T Consensus 1 ~~~~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 76 (475)
T 1euh_A 1 MTKQYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILM 76 (475)
T ss_dssp -CCBCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCcccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHH
Confidence 455668999999998633 899999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cc----ccc-ceeecCCeEEEEEcCCCh
Q 010735 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RA----LQG-YTLREPIGVVGHIIPWNF 171 (502)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~P~Gvv~~i~p~n~ 171 (502)
+|.++|++++++|+|||+.++ ..|+..+++.+++++.++++..+...+.. .+ ... ++.++|+|||++|+||||
T Consensus 77 ~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 155 (475)
T 1euh_A 77 RDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNY 155 (475)
T ss_dssp HTHHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTS
T ss_pred HhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCc
Confidence 999999999999999999976 57999999999999998877665544432 23 345 889999999999999999
Q ss_pred hHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHH
Q 010735 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251 (502)
Q Consensus 172 P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g 251 (502)
|+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++++++|++.++++.|+.||++|.|+||||+.+|
T Consensus 156 P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g 235 (475)
T 1euh_A 156 PVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIG 235 (475)
T ss_dssp TTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHH
T ss_pred hHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHH
Confidence 99999999999999999999999999999999999999999999999999999777789999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccc
Q 010735 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (502)
Q Consensus 252 ~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~ 331 (502)
+.|++.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 236 ~~i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 312 (475)
T 1euh_A 236 ERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALT 312 (475)
T ss_dssp HHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhcc
Confidence 99999864 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEe
Q 010735 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (502)
Q Consensus 332 ~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 411 (502)
+|+|.+ ++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 313 ~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~ 388 (475)
T 1euh_A 313 IGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRV 388 (475)
T ss_dssp BSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred CCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEec
Confidence 999999 999999999999999999999999999999999975 5899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcC-cCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhcc
Q 010735 412 KTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC-YFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490 (502)
Q Consensus 412 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~-~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k 490 (502)
+|+||||+++|+++|||+++|||+|.++++++++++++|.|+||+ +....+.+||||+|.||+|+++|++|+++|++.|
T Consensus 389 ~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 468 (475)
T 1euh_A 389 TSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVK 468 (475)
T ss_dssp SCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEE
T ss_pred CCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCee
Confidence 999999999999999999999999999999999999999999999 6666789999999999999999999999999999
Q ss_pred EEEEec
Q 010735 491 SVVTPI 496 (502)
Q Consensus 491 ~v~~~~ 496 (502)
+|++++
T Consensus 469 ~v~~~~ 474 (475)
T 1euh_A 469 SVVFDI 474 (475)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 998764
No 31
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.8e-102 Score=816.85 Aligned_cols=469 Identities=39% Similarity=0.625 Sum_probs=423.4
Q ss_pred cccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 010735 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (502)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (502)
|++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+
T Consensus 4 m~~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 81 (478)
T 3ty7_A 4 MRDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYE 81 (478)
T ss_dssp CEECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 45567899999999987888999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhh
Q 010735 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (502)
++.++|++++++|+|||..++...|+..+++.+++++.++++..+... ....++.++|+|||++|+|||||+...+
T Consensus 82 ~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 157 (478)
T 3ty7_A 82 NRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTS 157 (478)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHH
T ss_pred HhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHH
Confidence 999999999999999999987578999999999999998877655432 2457889999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|+++++++++.++++.|+.||++|.|+||||+.+|+.|++.
T Consensus 158 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~ 237 (478)
T 3ty7_A 158 LKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEK 237 (478)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CS
T ss_pred HHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877899999999999999999999999999998
Q ss_pred HhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCC
Q 010735 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (502)
Q Consensus 258 aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~ 337 (502)
++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+
T Consensus 238 aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 316 (478)
T 3ty7_A 238 AA-KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPRE 316 (478)
T ss_dssp TT-TTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HH-hcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 77 78999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-C--CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCH
Q 010735 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-G--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTV 414 (502)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 414 (502)
+++++||+++..+++++++++++++++|+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 317 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 396 (478)
T 3ty7_A 317 DGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDL 396 (478)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCH
Confidence 99999999999999999999999999999999999432 1 36899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 415 EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 415 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
||||+++|+++|||+++|||+|.+.++++++++++|+|+||+ ....+.+||||+|.||+|+++|++|+++|++.|+|+.
T Consensus 397 ~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 397 DEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEEEEEEET
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 999999999999999999999999999999999999999999 5566889999999999999999999999999999873
No 32
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1.8e-101 Score=811.66 Aligned_cols=471 Identities=29% Similarity=0.478 Sum_probs=441.8
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 19 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
...++.||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|++
T Consensus 21 ~~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 96 (500)
T 2j6l_A 21 REENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALRE 96 (500)
T ss_dssp CSEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 45678899999994 567899999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc-cccccceeecCCeEEEEEcCCChhHHhhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (502)
+.++|++++++|+|||..++ ..|+..+++.+++++.+++++.+...+.. .+...+++++|+|||++|+|||||+...+
T Consensus 97 ~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 175 (500)
T 2j6l_A 97 KIQVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYG 175 (500)
T ss_dssp THHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHH
Confidence 99999999999999999976 67999999999999988877665544332 23345788999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH----HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~----~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~ 253 (502)
+++++||++||+||+|||+.+|+++..+++++. ++|+|+|++++|+| +.++++.|+.||++|+|+||||+.+|+.
T Consensus 176 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~ 254 (500)
T 2j6l_A 176 WNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQ 254 (500)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHH
T ss_pred HHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHH
Confidence 999999999999999999999999999988876 56999999999999 7788999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccC
Q 010735 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (502)
Q Consensus 254 i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (502)
|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 255 i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 333 (500)
T 2j6l_A 255 VGLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVG 333 (500)
T ss_dssp HHHHHH-HTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBS
T ss_pred HHHHhc-cCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccC
Confidence 999987 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCC
Q 010735 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT 413 (502)
Q Consensus 334 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 413 (502)
+|.++++++|||+++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 334 ~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 413 (500)
T 2j6l_A 334 NPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQN 413 (500)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECC
T ss_pred CcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCC
Confidence 99999999999999999999999999999999999999976444699999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEecCCHHHHHHHH--hhcceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhcc
Q 010735 414 VEEAIKSANNTRYGLAAGIMTKDLNVANTVS--RSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490 (502)
Q Consensus 414 ~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~--~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k 490 (502)
+||||+++|+++|||+++|||+|.+++++++ +++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|
T Consensus 414 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k 493 (500)
T 2j6l_A 414 EEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRS 493 (500)
T ss_dssp HHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceE
Confidence 9999999999999999999999999999999 779999999998755 3478999999999999999999999999999
Q ss_pred EEEEec
Q 010735 491 SVVTPI 496 (502)
Q Consensus 491 ~v~~~~ 496 (502)
+|++++
T Consensus 494 ~v~~~~ 499 (500)
T 2j6l_A 494 TCTINY 499 (500)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 998764
No 33
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.3e-101 Score=812.23 Aligned_cols=466 Identities=29% Similarity=0.450 Sum_probs=441.1
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (502)
.+++||||+|+.+ + .+++++||+||+++++++.++.+|+++++++|++||+. .|+.++.++|.++|++++++|++|.
T Consensus 18 ~~~~~i~g~~~~~-~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 94 (501)
T 1uxt_A 18 VYPSYLAGEWGGS-G-QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNL 94 (501)
T ss_dssp EECEECSSSEECC-S-CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecC-C-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhH
Confidence 3468999999976 3 78999999999999999999999999999999999862 3999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecc---c--ccccceeecCCeEEEEEcCCChhHHh
Q 010735 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---R--ALQGYTLREPIGVVGHIIPWNFPTTM 175 (502)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (502)
++|++++++|+|||..++. .|+..+++.+++++.++++..+...+.. . +...++.++|+|||++|+|||||+..
T Consensus 95 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (501)
T 1uxt_A 95 DVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 173 (501)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence 9999999999999999764 7999999999999998887766654432 2 23568999999999999999999999
Q ss_pred hhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHH
Q 010735 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (502)
Q Consensus 176 ~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 255 (502)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||++|.|+||||+.+|+.|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~ 252 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 252 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977 8899999999999999999999999999
Q ss_pred HHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCC
Q 010735 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (502)
Q Consensus 256 ~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~ 335 (502)
+.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 253 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 329 (501)
T 1uxt_A 253 KVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 329 (501)
T ss_dssp HHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence 9865 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCC-ceEecEEEeeCC---CCCcccccceeeceEEEEEe
Q 010735 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG-YYIEPTIFTNVT---EDMLIAKNEIFGPVMALMKF 411 (502)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g-~~~~Ptvl~~~~---~~~~~~~~E~fgPvl~v~~~ 411 (502)
.++++++||++++.+++++.+++++++.+|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|
T Consensus 330 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~ 406 (501)
T 1uxt_A 330 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEV 406 (501)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEE
T ss_pred cccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEee
Confidence 999999999999999999999999999999999999975 57 999999999999 99999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCc-CCCCCCCCcCCCCCCCCCCcchHHHHHhhhhcc
Q 010735 412 KTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY-FAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 490 (502)
Q Consensus 412 ~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~-~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k 490 (502)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++ ....+.+||||+|.||+|+++|++|+++|++.|
T Consensus 407 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k 486 (501)
T 1uxt_A 407 KDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYK 486 (501)
T ss_dssp SSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEE
T ss_pred CCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCcee
Confidence 9999999999999999999999999999999999999999999998 556789999999999999999999999999999
Q ss_pred EEEEecC
Q 010735 491 SVVTPIF 497 (502)
Q Consensus 491 ~v~~~~~ 497 (502)
+|.+++.
T Consensus 487 ~v~~~~~ 493 (501)
T 1uxt_A 487 TIVFNYK 493 (501)
T ss_dssp EEEEECT
T ss_pred EEEEecC
Confidence 9988764
No 34
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=4.9e-101 Score=806.34 Aligned_cols=470 Identities=33% Similarity=0.535 Sum_probs=442.0
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 010735 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (502)
Q Consensus 22 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (502)
+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.+
T Consensus 6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (486)
T 1t90_A 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHKE 83 (486)
T ss_dssp CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999876678999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeee-cccccccceeecCCeEEEEEcCCChhHHhhhhhH
Q 010735 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (502)
Q Consensus 102 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 180 (502)
+|++++++|+|||+.++ ..|+..+++.+++++.+.+...+...+ ...+...+++++|+|||++|+|||||+...++++
T Consensus 84 ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 162 (486)
T 1t90_A 84 ELAHLITIENGKNTKEA-LGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMF 162 (486)
T ss_dssp HHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHH
Confidence 99999999999999975 579999999999998776666555433 1234456889999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 181 ~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++| +.++++.|+.||+||.|.||||+.+|+.|++.++
T Consensus 163 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa- 240 (486)
T 1t90_A 163 PMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS- 240 (486)
T ss_dssp HHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH-
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh-
Confidence 99999999999999999999999999999999999999999999 5578999999999999999999999999999987
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcE-EEEecccHHHHHHHHHHHHhccccCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR-VYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~-v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~ 339 (502)
+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|+++++++++|+|.+++
T Consensus 241 ~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~ 319 (486)
T 1t90_A 241 ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDG 319 (486)
T ss_dssp HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred ccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccC
Confidence 789999999999999999999999999999999999999999999999 999999 999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAI 418 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 418 (502)
+++||+++..+++++.+++++++.+|+++++||.... .+|+|+.|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 320 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai 399 (486)
T 1t90_A 320 VFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAI 399 (486)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHH
Confidence 9999999999999999999999999999999997432 368999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCC-CCCCCcCCCCCCCCC--CcchHHHHHhhhhccEEEEe
Q 010735 419 KSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFG--RDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 419 ~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~g--~~~g~~~~~~~~~~k~v~~~ 495 (502)
+++|+++|||++||||+|.++++++++++++|.|+||++... .+.+||||+|.||+| +++|++|+++|++.|+|+.+
T Consensus 400 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~ 479 (486)
T 1t90_A 400 EIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479 (486)
T ss_dssp HHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEE
T ss_pred HHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999999986443 478999999999999 89999999999999999887
Q ss_pred cC
Q 010735 496 IF 497 (502)
Q Consensus 496 ~~ 497 (502)
+.
T Consensus 480 ~~ 481 (486)
T 1t90_A 480 YP 481 (486)
T ss_dssp CC
T ss_pred cC
Confidence 63
No 35
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=1.2e-100 Score=808.23 Aligned_cols=468 Identities=31% Similarity=0.550 Sum_probs=438.6
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCC-CCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
.+++||||+|+. ++.+++++||+ ||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++
T Consensus 37 ~~~~~i~G~~~~--~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (516)
T 1uzb_A 37 HYPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRR 112 (516)
T ss_dssp EECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 36789999999 6999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeee--cccccccceeecCCeEEEEEcCCChhHHhhh
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK--MSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (502)
.++|++++++|+|||+.++. .|+..+++.+++++.++++..+...+ ...+...++.++|+|||++|+|||||+...+
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 191 (516)
T 1uzb_A 113 KRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFT 191 (516)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHH
Confidence 99999999999999999764 79999999999999988777654322 1234456889999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++++|+|.+.++++.|+.||+||.|+||||+.+|+.|++.
T Consensus 192 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~ 271 (516)
T 1uzb_A 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271 (516)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999998
Q ss_pred Hhc-----CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc
Q 010735 258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (502)
Q Consensus 258 aa~-----~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (502)
++. +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 272 aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 351 (516)
T 1uzb_A 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred hhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccC
Confidence 751 568999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
|+| ++++++|||+++.+++++.+++++++++| ++++||......|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus 352 G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 429 (516)
T 1uzb_A 352 GPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp SCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeC
Confidence 999 99999999999999999999999999999 8999997633369999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCC-CcchHHHHHhhhhc
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGLESLHNYLQV 489 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~ 489 (502)
|+||||+++|+++|||++||||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+| +++|.+++++|++.
T Consensus 430 ~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~ 509 (516)
T 1uzb_A 430 DFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEM 509 (516)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEE
T ss_pred CHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCe
Confidence 99999999999999999999999999999999999999999998654 3578999999999999 48899999999999
Q ss_pred cEEEEe
Q 010735 490 KSVVTP 495 (502)
Q Consensus 490 k~v~~~ 495 (502)
|+|+++
T Consensus 510 k~v~~~ 515 (516)
T 1uzb_A 510 KAVAER 515 (516)
T ss_dssp EEEEEE
T ss_pred eEEEec
Confidence 999875
No 36
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=2.3e-99 Score=790.74 Aligned_cols=456 Identities=29% Similarity=0.470 Sum_probs=434.0
Q ss_pred CCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC
Q 010735 35 SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL 114 (502)
Q Consensus 35 ~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 114 (502)
+..+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 356799999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEec
Q 010735 115 HSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194 (502)
Q Consensus 115 ~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kp 194 (502)
..++ ..|+..+++.+++++.+.++..+.......+...+++++|+|||++|+|||||++..++++++||++||+||+||
T Consensus 83 ~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQA-RAEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHH-HHHHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 9976 579999999999999988766554422224556789999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCC
Q 010735 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274 (502)
Q Consensus 195 s~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~ 274 (502)
|+.+|.++.++++++.++|+|+|++|++++ +.+.+..|+.||++|.|+||||+.+|+.|++.++ .+++|+++|+||||
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAG-AALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHh-ccCCceEEEcCCCC
Confidence 999999999999999999999999999999 4567899999999999999999999999999987 78999999999999
Q ss_pred ceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHH
Q 010735 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRI 354 (502)
Q Consensus 275 ~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~ 354 (502)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEec
Q 010735 355 LSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMT 434 (502)
Q Consensus 355 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t 434 (502)
.+++++++.+|+++++||.....+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t 399 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFT 399 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEEC
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999999986556799999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEe
Q 010735 435 KDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 495 (502)
Q Consensus 435 ~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~ 495 (502)
+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 400 ~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~ 460 (462)
T 3etf_A 400 ADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKN 460 (462)
T ss_dssp SCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEC
T ss_pred CCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEe
Confidence 9999999999999999999999887788999999999999999999999999999999875
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=1.1e-98 Score=796.25 Aligned_cols=472 Identities=25% Similarity=0.395 Sum_probs=438.5
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
..+++||||+|+.+ +..+.++||.| |+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|++
T Consensus 62 ~~~~~~I~G~~~~~--~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~ 137 (563)
T 4e3x_A 62 EAIPCVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSG 137 (563)
T ss_dssp EECCEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCeEECCEEeec--CCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 35679999999985 34778999998 799999999999999999999999999 89999999999999999999999
Q ss_pred h-HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeee-ecccccccceeecCCeEEEEEcCCChhHHhh
Q 010735 99 H-AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KMSRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (502)
Q Consensus 99 ~-~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (502)
+ +++|++++++|+|||+.++...++..+++.+++++.+++++.+... ....+...+.++.|+|||++|+|||||+...
T Consensus 138 ~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 138 PRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred ccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHH
Confidence 8 9999999999999999987544499999999999998877765322 1122344567788899999999999999999
Q ss_pred hhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHH
Q 010735 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (502)
Q Consensus 177 ~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 256 (502)
.+++++|| +||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.++++.|+.||+|+.|.||||+.+|+.|++
T Consensus 218 ~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~ 296 (563)
T 4e3x_A 218 NLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWR 296 (563)
T ss_dssp HHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 59999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHhcCCCC------ceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcc
Q 010735 257 AAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 330 (502)
Q Consensus 257 ~aa~~~~~------~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~ 330 (502)
.++ .+++ |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 297 ~aa-~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l 375 (563)
T 4e3x_A 297 QVA-QNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRI 375 (563)
T ss_dssp HHH-HTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHH-hhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhc
Confidence 987 6677 499999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEE
Q 010735 331 VVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 408 (502)
Q Consensus 331 ~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 408 (502)
++|+| .|+++++||++++.+++++.++|+++++ +|+++++||..+..+|+|++|||+.+++++|++++||+||||++|
T Consensus 376 ~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V 455 (563)
T 4e3x_A 376 KVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTV 455 (563)
T ss_dssp CBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEE
T ss_pred cCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEE
Confidence 99999 9999999999999999999999999996 899999999876667999999999999999999999999999999
Q ss_pred EEeCC--HHHHHHHH-hcCCCCceEEEecCCHHHHHHHHhhcc--eeEEEEcCcCC--CCCCCCcCCCCCCCCC-CcchH
Q 010735 409 MKFKT--VEEAIKSA-NNTRYGLAAGIMTKDLNVANTVSRSIR--AGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGL 480 (502)
Q Consensus 409 ~~~~~--~~eai~~~-n~~~~gl~~~v~t~d~~~~~~~~~~l~--~g~v~iN~~~~--~~~~~pfgG~~~SG~g-~~~g~ 480 (502)
++|+| +||||+++ |+++|||+++|||+|.+.+++++++++ +|+|+||+.+. ..+.+||||+|.||+| +++|+
T Consensus 456 ~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~ 535 (563)
T 4e3x_A 456 YVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGP 535 (563)
T ss_dssp EEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTST
T ss_pred EEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCH
Confidence 99997 79999999 799999999999999999999999975 99999999764 3578999999999998 89999
Q ss_pred HHHHhhhhccEEEEecC
Q 010735 481 ESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 481 ~~~~~~~~~k~v~~~~~ 497 (502)
+++++|+++|+|..++.
T Consensus 536 ~~l~~~~~~k~v~~~~~ 552 (563)
T 4e3x_A 536 HYILRWTSPQVIKETHK 552 (563)
T ss_dssp TGGGGGBCCEEEEEECS
T ss_pred HHHHHhCceEEEEEeCc
Confidence 99999999999998863
No 38
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=9.4e-98 Score=782.23 Aligned_cols=461 Identities=28% Similarity=0.415 Sum_probs=433.5
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 010735 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (502)
Q Consensus 23 ~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (502)
++||||+|+.+ ++..+.++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.++
T Consensus 7 ~~~I~G~~~~~-~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 83 (490)
T 3ju8_A 7 THYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE 83 (490)
T ss_dssp CEEETTEEECC-CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CceECCEEecC-CCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999986 356899999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHH
Q 010735 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (502)
Q Consensus 103 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 182 (502)
|++++++|+|||..++ ..|+..+++.+++++.+.+...+...+...+...+++++|+|||++|+|||||+...++++++
T Consensus 84 la~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (490)
T 3ju8_A 84 LARVIGEETGKPLWES-ATEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP 162 (490)
T ss_dssp HHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence 9999999999999976 579999999999999887766655433223345567799999999999999999999999999
Q ss_pred HHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCC
Q 010735 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (502)
Q Consensus 183 ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 262 (502)
||++||+||+|||+.+|+++.++++++.++|+|+|++|++++ +.+.++.|+.||++|.|+||||+.+|+.|++.++ .+
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa-~~ 240 (490)
T 3ju8_A 163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFG-GQ 240 (490)
T ss_dssp HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTT-TC
T ss_pred HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhh-cc
Confidence 999999999999999999999999999999999999999999 6788999999999999999999999999999987 78
Q ss_pred CCce-EEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEeccc-HHHHHHHHHHHHhccccCC-CCCCC
Q 010735 263 LKPV-SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGD-PFDPA 339 (502)
Q Consensus 263 ~~~~-~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~-~~~~~ 339 (502)
++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|+++++++++|+ |.+++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 8998 7999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHH
Q 010735 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIK 419 (502)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 419 (502)
+++||+++..+++++.+++++++.+|+++++||.....+|+|++|||+. ++++|++++||+||||++|++|+|+||||+
T Consensus 321 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~ 399 (490)
T 3ju8_A 321 PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIR 399 (490)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999997765679999999998 999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC-CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 420 SANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 420 ~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||.+ ++++|++.|+|+++.
T Consensus 400 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 400 EANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp HHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred HHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 9999999999999999999999999999999999999865 4578999999999975 589999999998764
No 39
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1.5e-97 Score=778.36 Aligned_cols=461 Identities=30% Similarity=0.461 Sum_probs=428.5
Q ss_pred CCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Q 010735 34 VSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGK 113 (502)
Q Consensus 34 ~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 113 (502)
++.++++++||+||+++++++.++.+|+++++++|++||+ .|++++.++|.++|++++++|++|+++|++++++|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3568999999999999999999999999999999999999 89999999999999999999999999999999999999
Q ss_pred CHHHHhhccHHHHHHHHHHHHHhhhhhcCee-eec-ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEE
Q 010735 114 LHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191 (502)
Q Consensus 114 ~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv 191 (502)
+... ..|+...++.+++++..+.+..... ... .++...+..++|+|||++|+|||||+...++++++||++||+||
T Consensus 81 ~~~~--~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSIT--VLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHH--HHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHH--HHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 8653 4699999999999988776544332 222 13345567889999999999999999999999999999999999
Q ss_pred EecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecC
Q 010735 192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271 (502)
Q Consensus 192 ~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~g 271 (502)
+|||+.+|.++..+.+++.++|+|+|+++++++ +.+.+..|+.| +|.|.||||+.+|+.|++.++ .++||+++|+|
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa-~~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAA-RRFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHH-HHTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhh-cccccccccCC
Confidence 999999999999999999999999999999999 56778889876 899999999999999999987 78999999999
Q ss_pred CCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHH
Q 010735 272 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQF 351 (502)
Q Consensus 272 G~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~ 351 (502)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceE
Q 010735 352 DRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 430 (502)
Q Consensus 352 ~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 430 (502)
+++.+++++++.+|+++++||.... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a 394 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSA 394 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEE
T ss_pred HHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeE
Confidence 9999999999999999999997653 468999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCC-CcchHHHHHhhhhccEEEEecC--CCCCC
Q 010735 431 GIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPIF--NSPWL 502 (502)
Q Consensus 431 ~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~k~v~~~~~--~~~~~ 502 (502)
||||+|.++++++++++++|+|+||++.. ..+..||||+|.||+| +++|.+|+++|+++|+|+++.. ..||+
T Consensus 395 ~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w 471 (474)
T 4h7n_A 395 AVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWW 471 (474)
T ss_dssp EEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTTS
T ss_pred EEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCCC
Confidence 99999999999999999999999999765 4578999999999998 7899999999999999998764 45553
No 40
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=8.9e-96 Score=813.67 Aligned_cols=472 Identities=32% Similarity=0.522 Sum_probs=444.8
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 010735 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (502)
Q Consensus 20 ~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (502)
...++||||+|+. ++.+++++||+| ++++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++
T Consensus 530 ~~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~ 605 (1026)
T 4f9i_A 530 KTYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARK 605 (1026)
T ss_dssp EEECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred cccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3567899999997 468999999998 999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCeeeec-ccccccceeecCCeEEEEEcCCChhHHhhh
Q 010735 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (502)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (502)
++++|++++++|+|||..++ ..|+..+++.+++++.+++++.+...+. ..+..+++.++|+|||++|+|||||+...+
T Consensus 606 ~~~eLa~~~~~E~GK~~~ea-~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~ 684 (1026)
T 4f9i_A 606 RLFELSAWQVLEIGKQWDQA-YADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISM 684 (1026)
T ss_dssp THHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHHhCCChhhH-HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHH
Confidence 99999999999999999975 5799999999999999988766543332 345567889999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 178 ~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~ 764 (1026)
T 4f9i_A 685 GMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIER 764 (1026)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred Hhc-----CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc
Q 010735 258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (502)
Q Consensus 258 aa~-----~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (502)
++. .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 765 aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v 844 (1026)
T 4f9i_A 765 AAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV 844 (1026)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred hhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence 762 367999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeC
Q 010735 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (502)
Q Consensus 333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 412 (502)
|+|.++++++||+++..+++++.++|++++.+| ++++||..+...|+|+.|||+.++++++++++||+||||++|++|+
T Consensus 845 G~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 923 (1026)
T 4f9i_A 845 GPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAK 923 (1026)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999997655459999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCCC-cchHHHHHhhhhc
Q 010735 413 TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGR-DCGLESLHNYLQV 489 (502)
Q Consensus 413 ~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g~-~~g~~~~~~~~~~ 489 (502)
|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+. ..+.+||||+|.||+|+ .+|++++++|++.
T Consensus 924 d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~ 1003 (1026)
T 4f9i_A 924 DFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDP 1003 (1026)
T ss_dssp SHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEE
T ss_pred CHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceE
Confidence 99999999999999999999999999999999999999999999765 34789999999999995 7899999999999
Q ss_pred cEEEEecC
Q 010735 490 KSVVTPIF 497 (502)
Q Consensus 490 k~v~~~~~ 497 (502)
|+|..+..
T Consensus 1004 k~v~~~~~ 1011 (1026)
T 4f9i_A 1004 RVVTENTM 1011 (1026)
T ss_dssp EEEEEECC
T ss_pred EEEEEecc
Confidence 99988763
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=6.7e-96 Score=775.90 Aligned_cols=464 Identities=23% Similarity=0.332 Sum_probs=422.2
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 010735 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEH 99 (502)
Q Consensus 21 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (502)
..++||||+|+.+.+ .+++++||+||+++++++.++ +|+++++++|++| |+ .|+.++.++|.++|++++++|++|
T Consensus 7 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (534)
T 2y53_A 7 LLKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAK 82 (534)
T ss_dssp ECCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHh
Confidence 467899999997644 579999999999999999998 8999999999999 58 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhhcCe-------eeecc-cc-cccceeecCC-eEEEEEcCC
Q 010735 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-------VLKMS-RA-LQGYTLREPI-GVVGHIIPW 169 (502)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-------~~~~~-~~-~~~~~~~~P~-Gvv~~i~p~ 169 (502)
.++|++++++|+|||+.++. .|+..+++.+++++.+++++.+. ..+.. .+ ...+..++|+ |||++|+||
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~Pw 161 (534)
T 2y53_A 83 RGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAF 161 (534)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCT
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCC
Confidence 99999999999999999764 69999999999999887665431 12221 11 1357889997 999999999
Q ss_pred ChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcC-CCCceEEEecCCchhHHHHHHhC-CCcCEEEEcCC
Q 010735 170 NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASH-MDIDKVSFTGS 247 (502)
Q Consensus 170 n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aG-lP~g~~~~v~g~~~~~~~~l~~~-~~v~~V~ftGs 247 (502)
|||+...++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.+ +..+ +++|+|+||||
T Consensus 162 N~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~----l~~~l~~vd~V~FTGS 237 (534)
T 2y53_A 162 NFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG----LLDQIRSFDVVSFTGS 237 (534)
T ss_dssp TCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT----SGGGCCTTCEEEEESC
T ss_pred chHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH----HHhcccccCEEEEECC
Confidence 99999999999999999999999999999999999999999999 799999999986543 3333 67999999999
Q ss_pred cHHHHHHHHHHh-cCCCCceEEecCCCCceEEccCC-----CHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHH
Q 010735 248 TDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321 (502)
Q Consensus 248 ~~~g~~i~~~aa-~~~~~~~~~e~gG~~~~iV~~da-----dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~ 321 (502)
+.+|+.|++.++ .+++||+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||+++||+|++
T Consensus 238 ~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~ 317 (534)
T 2y53_A 238 ADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLE 317 (534)
T ss_dssp HHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHH
T ss_pred HHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHH
Confidence 999999998753 36799999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC------CCCceEecEEEeeCCCC--
Q 010735 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG------KKGYYIEPTIFTNVTED-- 393 (502)
Q Consensus 322 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~------~~g~~~~Ptvl~~~~~~-- 393 (502)
+|+++++++++|+|.++++++|||+++.+++++.++|+++ .+|+++++||.... ..|+|++|||+.+++++
T Consensus 318 ~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~ 396 (534)
T 2y53_A 318 ALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNA 396 (534)
T ss_dssp HHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGC
T ss_pred HHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCcccc
Confidence 9999999999999999999999999999999999999999 68999999997421 35899999999999877
Q ss_pred CcccccceeeceEEEEEeC---CH-----HHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc--ceeEEEEcCcCC----
Q 010735 394 MLIAKNEIFGPVMALMKFK---TV-----EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI--RAGIIWINCYFA---- 459 (502)
Q Consensus 394 ~~~~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l--~~g~v~iN~~~~---- 459 (502)
|++++||+||||++|++|+ |+ ||||+++|+++|||++||||+|.++++++++++ ++|+|+||++..
T Consensus 397 ~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~ 476 (534)
T 2y53_A 397 TLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQ 476 (534)
T ss_dssp SSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTC
T ss_pred CHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccc
Confidence 6899999999999999999 99 999999999999999999999999999999999 899999998642
Q ss_pred -----CCCCCCcCCCCCCCCCCc-chHHHHHhhhhccEEEE
Q 010735 460 -----FDSDCPYGGYKMSGFGRD-CGLESLHNYLQVKSVVT 494 (502)
Q Consensus 460 -----~~~~~pfgG~~~SG~g~~-~g~~~~~~~~~~k~v~~ 494 (502)
..+.+||||+|.||+|++ +|.+|+++|++.|++..
T Consensus 477 ~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~ 517 (534)
T 2y53_A 477 TGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQA 517 (534)
T ss_dssp CCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEE
T ss_pred cccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeec
Confidence 357899999999999999 69999999999999875
No 42
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=2.7e-94 Score=750.40 Aligned_cols=444 Identities=25% Similarity=0.395 Sum_probs=398.8
Q ss_pred CCeEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Q 010735 36 GKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH 115 (502)
Q Consensus 36 ~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 115 (502)
...+++.||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.++|++++++|+|||.
T Consensus 5 ~~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 82 (457)
T 3lns_A 5 HHHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPK 82 (457)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCH
T ss_pred cccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 45688999999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHhhccHHHHHHHHHHHHHhhhhhcCe-eeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEE
Q 010735 116 SWAKMGDIPGAANTLRYYAGAADKIHGE-VLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191 (502)
Q Consensus 116 ~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv 191 (502)
.++...|+..+++.+++++..+++.... ..+. ..+...+++++|+|||++|+|||||+...++++++||++||+||
T Consensus 83 ~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV 162 (457)
T 3lns_A 83 DVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCI 162 (457)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEE
Confidence 9875569999999999999877655432 2221 13456789999999999999999999999999999999999999
Q ss_pred EecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecC
Q 010735 192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271 (502)
Q Consensus 192 ~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~g 271 (502)
+|||+.+|+++..+++++.++ +|+|++|+++| +.+.+..|+. +++|.|+||||+.+|+.|++.++ +++||+++|+|
T Consensus 163 lKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa-~~l~pv~lElG 238 (457)
T 3lns_A 163 IKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELG 238 (457)
T ss_dssp EECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECC
T ss_pred EECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHh-hccCceEEECC
Confidence 999999999999999999999 99999999999 6778899998 78999999999999999999987 88999999999
Q ss_pred CCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHH
Q 010735 272 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQF 351 (502)
Q Consensus 272 G~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~ 351 (502)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++ |.++ ++||+++++++
T Consensus 239 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~ 313 (457)
T 3lns_A 239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQV 313 (457)
T ss_dssp CCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHH
T ss_pred CCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999987 6665 99999999999
Q ss_pred HHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhc-CCCCceE
Q 010735 352 DRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANN-TRYGLAA 430 (502)
Q Consensus 352 ~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~~ 430 (502)
+++.++++++ ++++++||.... +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++
T Consensus 314 ~rv~~~i~~a---~~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a 389 (457)
T 3lns_A 314 QRLVSLLEAT---QGQVLVGSQADV-SKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAV 389 (457)
T ss_dssp HHHHHHHHHC---CSEEEECCCEEG-GGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEE
T ss_pred HHHHHHHHhc---CCeEEeCCccCC-CCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEE
Confidence 9999999985 359999997643 6899999999999999999999999999999999999999999999 9999999
Q ss_pred EEecCCHHHHHHHHhhcceeEEEEcCcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEE
Q 010735 431 GIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 494 (502)
Q Consensus 431 ~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~ 494 (502)
+|||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 390 ~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~ 455 (457)
T 3lns_A 390 YVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI 455 (457)
T ss_dssp EEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEE
T ss_pred EEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEe
Confidence 99999999999999999999999999753 46889999999999999999999999999999875
No 43
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1.1e-92 Score=738.65 Aligned_cols=429 Identities=26% Similarity=0.381 Sum_probs=394.4
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHH
Q 010735 55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134 (502)
Q Consensus 55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~ 134 (502)
..+.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.++|++++++|+|||..++...|+..++..+++++
T Consensus 14 ~~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 91 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMI 91 (469)
T ss_dssp ----CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456789999999999999 89999999999999999999999999999999999999999876679999999888877
Q ss_pred HhhhhhcCe-ee---ecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH
Q 010735 135 GAADKIHGE-VL---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (502)
Q Consensus 135 ~~~~~~~~~-~~---~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~ 210 (502)
...+..... .. ....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~ 171 (469)
T 3sza_A 92 QKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIP 171 (469)
T ss_dssp HHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHH
T ss_pred HHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 655433221 11 11123457889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHH
Q 010735 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 290 (502)
Q Consensus 211 ~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~ 290 (502)
++ +|+|++++++|.+ +.+..|+.| ++|.|+||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.
T Consensus 172 ~a-lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~iV~~dADl~~Aa~~ 247 (469)
T 3sza_A 172 QY-LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYVDKNCDLDVACRR 247 (469)
T ss_dssp HH-SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECTTSCHHHHHHH
T ss_pred Hh-CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHh-hccCceEEecCCCCceEECCCCCHHHHHHH
Confidence 98 9999999999944 456677777 8999999999999999999987 889999999999999999999999999999
Q ss_pred HHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEe
Q 010735 291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 370 (502)
Q Consensus 291 iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 370 (502)
+++++|.|+||.|++++|||||+++||+|+++|+++++++ .|+|.++++++||+++..+++++.+++ +|+++++
T Consensus 248 i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~ 321 (469)
T 3sza_A 248 IAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAY 321 (469)
T ss_dssp HHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEE
T ss_pred HHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEe
Confidence 9999999999999999999999999999999999999998 599999999999999999999999998 6999999
Q ss_pred CCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhccee
Q 010735 371 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 450 (502)
Q Consensus 371 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g 450 (502)
||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 322 GG~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G 400 (469)
T 3sza_A 322 GGTGDA-ATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSG 400 (469)
T ss_dssp CCCEET-TTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCS
T ss_pred CCccCC-CCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcc
Confidence 998754 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCcCC--CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEec
Q 010735 451 IIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 451 ~v~iN~~~~--~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~ 496 (502)
.|+||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+++.
T Consensus 401 ~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 401 GVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp EEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred eEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 999999863 4689999999999999999999999999999998864
No 44
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.4e-92 Score=746.61 Aligned_cols=458 Identities=23% Similarity=0.293 Sum_probs=414.9
Q ss_pred cccccceeEcCeEeeCCCCCeEEeecCCCCceEE-EEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 010735 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (502)
Q Consensus 18 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~i~-~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l 96 (502)
+++..++||||+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|
T Consensus 26 ~~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 98 (528)
T 3v4c_A 26 FTPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEI 98 (528)
T ss_dssp CCCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHH
T ss_pred cccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHH
Confidence 456678999999997532 99999999998 9999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHHHHHhhhhh--cCeeee----c---ccccccceeecCCeEEEEEc
Q 010735 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI--HGEVLK----M---SRALQGYTLREPIGVVGHII 167 (502)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~--~~~~~~----~---~~~~~~~~~~~P~Gvv~~i~ 167 (502)
+++.++|++++++|+|||+.++ ..|+..+++.+++++..+++. .+.... . ..+...+++++|+|||++|+
T Consensus 99 ~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 177 (528)
T 3v4c_A 99 EARAEAITEIGSQETGLPEARL-NGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFG 177 (528)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEEC
T ss_pred HHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEEC
Confidence 9999999999999999999965 579999999999999888762 222221 1 02345688999999999999
Q ss_pred CCChhHHhhh--hhHHHHHHcCCeEEEecCCCcHHHHHHHHHHH----HHcCCCCceEEEecCCchhHHHHHHhCCCcCE
Q 010735 168 PWNFPTTMFF--MKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241 (502)
Q Consensus 168 p~n~P~~~~~--~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l----~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~ 241 (502)
|||||+...+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|++.+.++++.|+.||+||+
T Consensus 178 PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~ 257 (528)
T 3v4c_A 178 ASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKA 257 (528)
T ss_dssp CSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCE
T ss_pred CCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCE
Confidence 9999999865 89999999999999999999999999998875 56899999999999988789999999999999
Q ss_pred EEEcCCcHHHHHHHHHHhcCCC--CceEEecCCCCceEEccCC---CHHHHHHHHHHHHhccCCCCcCCCcEEEEecc-c
Q 010735 242 VSFTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIFDDV---DVNTAADMALLGILFNKGEICVASSRVYVQEG-I 315 (502)
Q Consensus 242 V~ftGs~~~g~~i~~~aa~~~~--~~~~~e~gG~~~~iV~~da---dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~-i 315 (502)
|+||||+.+|+.|++.++ .++ +|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ +
T Consensus 258 V~fTGS~~~G~~i~~~aa-~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i 336 (528)
T 3v4c_A 258 VGFTGSLAGGRALFDLCA-ARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGAD 336 (528)
T ss_dssp EEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHH
T ss_pred EEEECChHHHHHHHHHHh-hccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccH
Confidence 999999999999999987 677 9999999999999999999 88999999999999999999999999999997 9
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCC--
Q 010735 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTED-- 393 (502)
Q Consensus 316 ~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~-- 393 (502)
||+|+++|++++++++. ++.+||+++..+.+++.++++ .+|+++++||.. .|+|+.|||+.+++++
T Consensus 337 ~d~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~ 404 (528)
T 3v4c_A 337 ADRFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFL 404 (528)
T ss_dssp HHHHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHH
T ss_pred HHHHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccc
Confidence 99999999999999864 357899998888887777763 479999999975 6999999999988887
Q ss_pred -CcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecC--CHHHHHHHHhhcc--eeEEEEcCcCC---CCCCCC
Q 010735 394 -MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK--DLNVANTVSRSIR--AGIIWINCYFA---FDSDCP 465 (502)
Q Consensus 394 -~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~--d~~~~~~~~~~l~--~g~v~iN~~~~---~~~~~p 465 (502)
|++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+|+||+++. ..+.+|
T Consensus 405 ~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~p 484 (528)
T 3v4c_A 405 ADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMV 484 (528)
T ss_dssp HCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCC
T ss_pred cChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCC
Confidence 899999999999999999999999999999999999999999 8999999999998 99999999765 358899
Q ss_pred cCC-CCCCCCCCcc--hHHHHHhhhhccEEEEecC
Q 010735 466 YGG-YKMSGFGRDC--GLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 466 fgG-~~~SG~g~~~--g~~~~~~~~~~k~v~~~~~ 497 (502)
||| +|.||+|+++ |++|+++|+++|++ .++.
T Consensus 485 fGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~-q~~p 518 (528)
T 3v4c_A 485 HGGPYPASTNFGATSVGTMSIRRFLRPVAY-QNMP 518 (528)
T ss_dssp CCCTTTTBSCTTCCSSSGGGGGGGEEEEEE-ESCC
T ss_pred CCCCCCCCCCCCCCCCcHHHHHHhchhHHh-hcCC
Confidence 999 9999999976 99999999999874 4443
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=2.4e-89 Score=721.87 Aligned_cols=442 Identities=21% Similarity=0.285 Sum_probs=403.3
Q ss_pred CCCCeEEeecCCCCceE-EEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Q 010735 34 VSGKTFETIDPRTGEAI-ARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAG 112 (502)
Q Consensus 34 ~~~~~~~v~~P~tg~~i-~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~G 112 (502)
+++++++++||+||+++ ++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+|
T Consensus 4 ~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 81 (510)
T 1ez0_A 4 QTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLETA 81 (510)
T ss_dssp -CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHC
T ss_pred CCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Confidence 46778999999999999 79999999999999999999999 8999999999999999999999999999999999999
Q ss_pred CCHHHHhhccHHHHHHHHHHHHHhhhh--hcCeeee----c--ccc-cccceeecCCeEEEEEcCCChhHHhh--hhhHH
Q 010735 113 KLHSWAKMGDIPGAANTLRYYAGAADK--IHGEVLK----M--SRA-LQGYTLREPIGVVGHIIPWNFPTTMF--FMKVS 181 (502)
Q Consensus 113 k~~~~~~~~ev~~~~~~l~~~~~~~~~--~~~~~~~----~--~~~-~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~i~ 181 (502)
||+.++ ..|+..+++.+++++..+++ ..+.... . ..+ ...+++++|+|||++|+|||||+... .++++
T Consensus 82 k~~~~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~ 160 (510)
T 1ez0_A 82 LPEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTA 160 (510)
T ss_dssp CCHHHH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHH
T ss_pred CCHHHH-HHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHH
Confidence 999865 67999999999999988765 3333221 1 111 13578999999999999999999985 49999
Q ss_pred HHHHcCCeEEEecCCCcHHHHHHHHHHH----HHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHH
Q 010735 182 PALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (502)
Q Consensus 182 ~ALaaGN~vv~kps~~~~~~~~~l~~~l----~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 257 (502)
+||++||+||+|||+.+|+++..+++++ .++|+|+|++|+++|.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 161 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~ 240 (510)
T 1ez0_A 161 SALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNL 240 (510)
T ss_dssp HHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHH
Confidence 9999999999999999999999999998 567999999999999777889999999999999999999999999999
Q ss_pred HhcCCC--CceEEecCCCCceEEccCCCHH--HHHHHHHHHHhccCCCCcCCCcEEEEecc-cHHHHHHHHHHHHhcccc
Q 010735 258 AATSNL--KPVSLELGGKSPLLIFDDVDVN--TAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVV 332 (502)
Q Consensus 258 aa~~~~--~~~~~e~gG~~~~iV~~dadl~--~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~-i~~~f~~~l~~~~~~~~~ 332 (502)
++ .++ ||+++|+|||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++
T Consensus 241 aa-~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~ 319 (510)
T 1ez0_A 241 AH-ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP 319 (510)
T ss_dssp HH-HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC
T ss_pred hh-ccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC
Confidence 87 554 9999999999999999999999 99999999999999999999999999999 999999999999998763
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHH-HcCCEEEeCCcccCCCCceEecEEEeeCCCC---CcccccceeeceEEE
Q 010735 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGK-REGATLLTGGKPIGKKGYYIEPTIFTNVTED---MLIAKNEIFGPVMAL 408 (502)
Q Consensus 333 g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~fgPvl~v 408 (502)
||++++.+.+++.+++++++ .+|+++++||. .|+|+.|||+.+++++ |++++||+||||++|
T Consensus 320 ----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v 385 (510)
T 1ez0_A 320 ----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLI 385 (510)
T ss_dssp ----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEE
T ss_pred ----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEEE
Confidence 68889999999999999998 47999999996 2899999999988777 999999999999999
Q ss_pred EEeCCHHHHHHHHhcCCCCceEEEecCCH--HHHHHHHhhc--ceeEEEEcCcCC---CCCCCCcCC-CCCCCCCC--cc
Q 010735 409 MKFKTVEEAIKSANNTRYGLAAGIMTKDL--NVANTVSRSI--RAGIIWINCYFA---FDSDCPYGG-YKMSGFGR--DC 478 (502)
Q Consensus 409 ~~~~~~~eai~~~n~~~~gl~~~v~t~d~--~~~~~~~~~l--~~g~v~iN~~~~---~~~~~pfgG-~~~SG~g~--~~ 478 (502)
++|+|+||||+++|+++|||++||||+|. ++++++++++ ++|+|+||++.. ..+.+|||| +|.||+|+ ++
T Consensus 386 ~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~ 465 (510)
T 1ez0_A 386 VVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSV 465 (510)
T ss_dssp EEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSS
T ss_pred EEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCc
Confidence 99999999999999999999999999987 7999999999 799999999764 457899999 79999985 47
Q ss_pred hHHHHHhhhhccEEE
Q 010735 479 GLESLHNYLQVKSVV 493 (502)
Q Consensus 479 g~~~~~~~~~~k~v~ 493 (502)
|++|+++|++.|++.
T Consensus 466 G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 466 GAEAIHRWLRPVAYQ 480 (510)
T ss_dssp SGGGGGGGEEEEEEE
T ss_pred cHHHHHHhheEEEEc
Confidence 999999999988764
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=1.2e-87 Score=746.80 Aligned_cols=435 Identities=29% Similarity=0.462 Sum_probs=408.9
Q ss_pred EcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHHH
Q 010735 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY 132 (502)
Q Consensus 53 v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~ 132 (502)
++.++.+|+++++++|++||+ .|+.+|.++|.++|++++++|+++.++|++++++|+|||+.++ ..|+..+++.+++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea-~~Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDA-LSELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHH-HHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHH-HHHHHHHHHHHHH
Confidence 788999999999999999999 8999999999999999999999999999999999999999975 6799999999999
Q ss_pred HHHhhhhhcCee--eecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH
Q 010735 133 YAGAADKIHGEV--LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (502)
Q Consensus 133 ~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~ 210 (502)
++..+++..+.. .+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999887765543 333345678899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC--CCCceEEecCCCCceEEccCCCHHHHH
Q 010735 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAA 288 (502)
Q Consensus 211 ~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~--~~~~~~~e~gG~~~~iV~~dadl~~aa 288 (502)
++|+|+|++|+|+|++.+ +..|+.||+||.|+||||+.+|+.|++.++.. .++|+++|+|||||+||++|||++.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999998777 99999999999999999999999999988743 479999999999999999999999999
Q ss_pred HHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEE
Q 010735 289 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 368 (502)
Q Consensus 289 ~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v 368 (502)
+.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++|++++.+| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988 88
Q ss_pred EeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhh
Q 010735 369 LTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 446 (502)
Q Consensus 369 ~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~ 446 (502)
+||..+. .|+|+.|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.+.+++++++
T Consensus 859 -~gg~~~~-~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~ 934 (1001)
T 3haz_A 859 -HFAGPAP-EGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDR 934 (1001)
T ss_dssp -EEECCCC-SSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHH
T ss_pred -eccccCC-CCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHh
Confidence 8887654 699999999974 6889999999999999999996 899999999999999999999999999999999
Q ss_pred cceeEEEEcCcCCC--CCCCCcCCCCCCCCC-CcchHHHHHhhhhccEEEEec
Q 010735 447 IRAGIIWINCYFAF--DSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 447 l~~g~v~iN~~~~~--~~~~pfgG~~~SG~g-~~~g~~~~~~~~~~k~v~~~~ 496 (502)
+++|+|+||+.... .+.+||||+|.||+| +++|++|+++|++.|+|+++.
T Consensus 935 l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 935 VQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp CCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred CCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 99999999997653 367899999999999 578999999999999999875
No 47
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.1e-83 Score=662.30 Aligned_cols=408 Identities=17% Similarity=0.152 Sum_probs=336.5
Q ss_pred eEEeecCCCCceEEEEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh------
Q 010735 38 TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA------ 111 (502)
Q Consensus 38 ~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~------ 111 (502)
.--++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+
T Consensus 8 ~~~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~ 85 (463)
T 2h5g_A 8 SSGVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGR 85 (463)
T ss_dssp ---------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT
T ss_pred cCCCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccc
Confidence 345889999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred -CCCHHH---HhhccHHHHHHHHHHHHHhhhhhcCeeeecc---cccccceeecCCeEEEEEcCCChhHHhhhhhHHHHH
Q 010735 112 -GKLHSW---AKMGDIPGAANTLRYYAGAADKIHGEVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL 184 (502)
Q Consensus 112 -Gk~~~~---~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL 184 (502)
|||+.+ ....|+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+||| |.+.. +++++||
T Consensus 86 ~Gk~~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~AL 163 (463)
T 2h5g_A 86 LAAPLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAI 163 (463)
T ss_dssp SCHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHH
T ss_pred CCCchhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHH
Confidence 799873 1246999999999999988777666543321 3345689999999999999887 77766 8999999
Q ss_pred HcCCeEEEecCCCcHHHHHHHHHHHHHc----CCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhc
Q 010735 185 AAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (502)
Q Consensus 185 aaGN~vv~kps~~~~~~~~~l~~~l~~a----GlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 260 (502)
++||+||+|||+.+|+++..+++++.++ | |+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 164 aaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa- 240 (463)
T 2h5g_A 164 ASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK- 240 (463)
T ss_dssp HHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS-
T ss_pred HcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC-
Confidence 9999999999999999999999999999 9 9999999999 6678999999999999999999999999999864
Q ss_pred CCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCC
Q 010735 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (502)
Q Consensus 261 ~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~ 340 (502)
+||+++|+|||||+||++|||++.|++.+++++|.| ||.|++++|||||+++||
T Consensus 241 --l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d----------------------- 294 (463)
T 2h5g_A 241 --GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR----------------------- 294 (463)
T ss_dssp --SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-----------------------
T ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-----------------------
Confidence 899999999999999999999999999999999999 999999999999999998
Q ss_pred cccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHH
Q 010735 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKS 420 (502)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 420 (502)
||+ + .+++++++++|++++.|+... ..|+|+ +++|++++||+||||++|++|+|+||||++
T Consensus 295 --~p~-----~---~~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~ 355 (463)
T 2h5g_A 295 --TPL-----F---DQIIDMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDH 355 (463)
T ss_dssp --SHH-----H---HHHHHHHHHTTCEEEECHHHH-C-----------------CCSSCCCCSSEEEEEEESSHHHHHHH
T ss_pred --hHH-----H---HHHHHHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHH
Confidence 333 2 335788888999998555422 234443 578999999999999999999999999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCC--Cc--chHHHHHhhhhccEEEEec
Q 010735 421 ANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFG--RD--CGLESLHNYLQVKSVVTPI 496 (502)
Q Consensus 421 ~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g--~~--~g~~~~~~~~~~k~v~~~~ 496 (502)
+|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+| ++ +|++|+++|++.|+|.++.
T Consensus 356 aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 356 IHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp HHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred HHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 9999999999999999999999999999999999998777789999999999999 65 9999999999999998875
Q ss_pred C
Q 010735 497 F 497 (502)
Q Consensus 497 ~ 497 (502)
.
T Consensus 436 ~ 436 (463)
T 2h5g_A 436 D 436 (463)
T ss_dssp S
T ss_pred C
Confidence 4
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=1.3e-80 Score=648.65 Aligned_cols=420 Identities=19% Similarity=0.206 Sum_probs=370.6
Q ss_pred EEcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHHH
Q 010735 52 RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR 131 (502)
Q Consensus 52 ~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~ 131 (502)
.++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|.++.++|++++++|+||+..++...+...+.+.+.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 3455678999999999999999 89999999999999999999999999999999999999998764434444444443
Q ss_pred HHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHH----
Q 010735 132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH---- 207 (502)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~---- 207 (502)
.+....+ ..+. .....+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++
T Consensus 83 ~~~~~~~-~~g~-~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 83 NYIKDMK-TIGM-LKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHTTCC-CSEE-EEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhccc-ccce-eccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 3332221 1121 222345677889999999999999999999999999999999999999999999999998654
Q ss_pred HHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecC-CCCceEEccCCCHHH
Q 010735 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG-GKSPLLIFDDVDVNT 286 (502)
Q Consensus 208 ~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~g-G~~~~iV~~dadl~~ 286 (502)
++.++|+|+|++++|++++.+.++.|+.||+||+|+||||+.+ .+.++ .++||+ +|+| ||+|+||++|||++.
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~-~~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAY-SSGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHT-TSSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHH-hcCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 5688999999999999987889999999999999999999984 34444 788999 7777 999999999999999
Q ss_pred HHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHH-------hccccCCCC-CCCCcccccCCHHHHHHHHHHH
Q 010735 287 AADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA-------KAWVVGDPF-DPAVRQGPQVDKKQFDRILSYI 358 (502)
Q Consensus 287 aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~-------~~~~~g~~~-~~~~~~gpl~~~~~~~~~~~~i 358 (502)
|++.+++++|+|+||.|+++++||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.+++
T Consensus 235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~ 314 (464)
T 3k9d_A 235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLA 314 (464)
T ss_dssp HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999986 456788887 6789999999999999999999
Q ss_pred HHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHH----HHHhcCCCCceEEEec
Q 010735 359 EHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAI----KSANNTRYGLAAGIMT 434 (502)
Q Consensus 359 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~~v~t 434 (502)
+.++.+|+++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||+++|||
T Consensus 315 ~~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t 379 (464)
T 3k9d_A 315 GLTVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHS 379 (464)
T ss_dssp TCCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEEC
T ss_pred hhhhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEe
Confidence 9988899999999863 456778865 89999999999999999997 7999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEEcCcCC---------CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecC
Q 010735 435 KDLNVANTVSRSIRAGIIWINCYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 435 ~d~~~~~~~~~~l~~g~v~iN~~~~---------~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
+|.+.++++++++++|+|+||++.. ..+.+|||| +.+|.|+++|..|+++|++.|+|.+...
T Consensus 380 ~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 380 EDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp SCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCC
T ss_pred CCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCC
Confidence 9999999999999999999999864 468999998 8899999999999999999999987654
No 49
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=1.7e-80 Score=646.05 Aligned_cols=396 Identities=16% Similarity=0.163 Sum_probs=324.4
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHHhhccHHH-HHHHHHHHH
Q 010735 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKMGDIPG-AANTLRYYA 134 (502)
Q Consensus 60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~~~~~ev~~-~~~~l~~~~ 134 (502)
.+++++++|++||+ .|+.++.++|.++|++++++|+++.++|++++++|+|||. .++...|+.. +++.+++++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 58999999999999 8999999999999999999999999999999999999998 7654468888 888888888
Q ss_pred Hhhhhhc------Ceeeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHH
Q 010735 135 GAADKIH------GEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 205 (502)
Q Consensus 135 ~~~~~~~------~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l 205 (502)
..++... +...+. +.+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 7776554 443332 12445689999999999999999 9 99999999999999999999999999999999
Q ss_pred HHHHH----H----cCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceE
Q 010735 206 AHLAK----L----AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (502)
Q Consensus 206 ~~~l~----~----aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~i 277 (502)
++++. + +|+|+|++|+|+ +++++++.|+.||+||.|+||||+.+|+.|++.+ +||+++|+|||||+|
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence 99995 8 999999999999 6667889999999999999999999999998874 699999999999999
Q ss_pred EccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc---CCCCCCCCcccccCCHHHHHHH
Q 010735 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRI 354 (502)
Q Consensus 278 V~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~ 354 (502)
|++|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|+++++++++ |+|.+
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------- 306 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------- 306 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------
Confidence 99999999999999999999999 99999999999999 9999999999999887 77532
Q ss_pred HHH-HHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEe
Q 010735 355 LSY-IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIM 433 (502)
Q Consensus 355 ~~~-i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~ 433 (502)
.++ ++++. ++++||. | +.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 307 ~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 373 (468)
T 1vlu_A 307 KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIV 373 (468)
T ss_dssp HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEE
T ss_pred hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEE
Confidence 334 55554 3667775 4 689887 78899999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCcCCCCCCCCcC-----CCCCCCCCCcchHHHHHhhhhccEEEEecC
Q 010735 434 TKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYG-----GYKMSGFGRDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 434 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfg-----G~~~SG~g~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
|+|.+.++++++++++|.|+||++....+.+||| |+|.||+|++ |++|+++|++.|+|..+..
T Consensus 374 t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~~ 441 (468)
T 1vlu_A 374 TENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGDG 441 (468)
T ss_dssp CSCHHHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCSGGGEEEEEEEECSS
T ss_pred eCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECCC
Confidence 9999999999999999999999987777889999 9999999999 9999999999999987643
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=7.6e-78 Score=623.82 Aligned_cols=390 Identities=21% Similarity=0.217 Sum_probs=334.9
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHhh-------ccHHHH
Q 010735 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAKM-------GDIPGA 126 (502)
Q Consensus 58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~~~~-------~ev~~~ 126 (502)
.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+||+.. ++.. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5789999999999999 89999999999999999999999999999999999999853 3221 378889
Q ss_pred HHHHHHHHHhhhhhcCeeeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHH
Q 010735 127 ANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203 (502)
Q Consensus 127 ~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~ 203 (502)
++.+++++.+.+.. +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999887643 443332 23456789999999999999998 8 688999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCceEEEecCCch-hHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEE
Q 010735 204 YFAHLA----KLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278 (502)
Q Consensus 204 ~l~~~l----~~aGlP~g~~~~v~g~~~-~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV 278 (502)
.+++++ .++|+|+|++++++|.+. .+++.|..||+||.|+||||+.+|+.|++.+ +||+++|+|||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 799999999999998554 5788888999999999999999999998874 6999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhcccc---CCCCCCCCcccccCCHHHHHHHH
Q 010735 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRIL 355 (502)
Q Consensus 279 ~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~~ 355 (502)
++|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++ |+|. ..
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~ 317 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------AR 317 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HH
Confidence 9999999999999999999999 9999999999999999999999999999887 6642 13
Q ss_pred HHHHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecC
Q 010735 356 SYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 435 (502)
Q Consensus 356 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~ 435 (502)
++++++. .| ++ +++++++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 318 ~~i~~a~---------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 374 (444)
T 4ghk_A 318 AVLEAAG---------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTE 374 (444)
T ss_dssp HHHHHTT---------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECS
T ss_pred HHHHhcc---------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeC
Confidence 4555432 12 11 3567999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCC----CcchHHHHHhhhhccEEEEecC
Q 010735 436 DLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFG----RDCGLESLHNYLQVKSVVTPIF 497 (502)
Q Consensus 436 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g----~~~g~~~~~~~~~~k~v~~~~~ 497 (502)
|.++++++++++++|.|+||++....+..||||.|.||+| +++|++|+++|++.|+|+++.+
T Consensus 375 d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~~ 440 (444)
T 4ghk_A 375 DHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHG 440 (444)
T ss_dssp BHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEEE
T ss_pred CHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECCC
Confidence 9999999999999999999998877889999999999998 7889999999999999988754
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=9.9e-78 Score=619.96 Aligned_cols=390 Identities=19% Similarity=0.220 Sum_probs=345.4
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHHh-------hccHHH
Q 010735 57 DKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAK-------MGDIPG 125 (502)
Q Consensus 57 ~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~~~-------~~ev~~ 125 (502)
..+++++++++|++||+ .|+.+|..+|.++|++++++|+++.++|++++++|+||+. .++. ..|+..
T Consensus 12 ~~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~ 89 (427)
T 1o20_A 12 HMDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDE 89 (427)
T ss_dssp --CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHH
Confidence 34689999999999999 8999999999999999999999999999999999999986 4432 258999
Q ss_pred HHHHHHHHHHhhhhhcCeeeec---ccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHH
Q 010735 126 AANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202 (502)
Q Consensus 126 ~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~ 202 (502)
+++.+++++.+.+. .+...+. ..+...+++++|+|||++|+||| +...++++++||++||+||+|||+.+|+++
T Consensus 90 ~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~ 166 (427)
T 1o20_A 90 MIKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSN 166 (427)
T ss_dssp HHHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHH
T ss_pred HHHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHH
Confidence 99999999988765 3443332 12344688999999999999886 478899999999999999999999999999
Q ss_pred HHHHHHHH----HcCCCCceEEEecCC-chhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceE
Q 010735 203 LYFAHLAK----LAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (502)
Q Consensus 203 ~~l~~~l~----~aGlP~g~~~~v~g~-~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~i 277 (502)
..+++++. ++|+|+|++|+|+|. .+++++.|..||+||.|+||||+.+|+.|++.+ .||+++|+|||||+|
T Consensus 167 ~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~i 242 (427)
T 1o20_A 167 KAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIF 242 (427)
T ss_dssp HHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEE
Confidence 99999997 689999999999984 456788899999999999999999999999885 599999999999999
Q ss_pred EccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHH
Q 010735 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (502)
Q Consensus 278 V~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~ 357 (502)
|++|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 243 V~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------ 297 (427)
T 1o20_A 243 VDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------ 297 (427)
T ss_dssp ECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE------------------------
T ss_pred EeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe------------------------
Confidence 99999999999999999999999 99999999999999999999999999987652
Q ss_pred HHHHHHcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCH
Q 010735 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 437 (502)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~ 437 (502)
+.||... .+ |+ ||| +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 298 -----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 359 (427)
T 1o20_A 298 -----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENY 359 (427)
T ss_dssp -----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCH
T ss_pred -----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCH
Confidence 1233211 12 33 885 245789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEEcCcCCCCCCCCcCCCCCCCCC----CcchHHHHHhhhhccEEEEecCC
Q 010735 438 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFG----RDCGLESLHNYLQVKSVVTPIFN 498 (502)
Q Consensus 438 ~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~g----~~~g~~~~~~~~~~k~v~~~~~~ 498 (502)
+.++++++++++|.|+||++....+.+||||.|.||+| +++|++|+++|++.|+|.+++++
T Consensus 360 ~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~~ 424 (427)
T 1o20_A 360 SNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEYH 424 (427)
T ss_dssp HHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSSC
T ss_pred HHHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECCCc
Confidence 99999999999999999998777788999999999997 47899999999999999988654
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.1e-76 Score=616.88 Aligned_cols=418 Identities=19% Similarity=0.245 Sum_probs=345.8
Q ss_pred EcCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhccHHHHHHHH-H
Q 010735 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL-R 131 (502)
Q Consensus 53 v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l-~ 131 (502)
++.++.+|+++++++|++||+ .|+.++.++|.++|++++++|+++.++|++++++|+|||..++...|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 356899999999999999999 8999999999999999999999999999999999999999987655666666666 3
Q ss_pred HHHHhhhhhcCeeeecccccccceeecCCeEEEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHH-
Q 010735 132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK- 210 (502)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~- 210 (502)
++.. .+..+ .++.+.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 79 ~~~~--~~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKD--EQTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTT--CCCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhh--ccccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 3322 11112 2222234567889999999999999999999999999999999999999999999999998888875
Q ss_pred ---HcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHH
Q 010735 211 ---LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA 287 (502)
Q Consensus 211 ---~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~a 287 (502)
++|+|+|++|++++++.+.++.|+.||+||+|+||||+.+++ .++ ..+||+++|+|||+|+||++|||++.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~-~~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAY-SSGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHH-TSSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHH-hcCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 789999999999998888999999999999999999998654 333 678999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCE
Q 010735 288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367 (502)
Q Consensus 288 a~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~ 367 (502)
++.+++++|+|+||.|+++++||||+++||+|+++|+++ .||++++++++++.++++++...|++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999999999999999999999999999999765 38999999999999999876667777
Q ss_pred EEeCCccc---CCCCceEecEE-------EeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCC----CCceEEEe
Q 010735 368 LLTGGKPI---GKKGYYIEPTI-------FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR----YGLAAGIM 433 (502)
Q Consensus 368 v~~gg~~~---~~~g~~~~Ptv-------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~~v~ 433 (502)
+ +||... ...|+|++||+ +.++++++++++ |+||||++|++|+|+||||+++|++. |||+++||
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~ 373 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLY 373 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEE
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEE
Confidence 6 476542 12589999997 567889999876 89999999999999999999999975 99999999
Q ss_pred cCCHHHHHH---HHhhcceeEEEEcCcCCCC-----------CCCCcCCCCCCCCCCcchHHHHHhhhhccEEEEecCC
Q 010735 434 TKDLNVANT---VSRSIRAGIIWINCYFAFD-----------SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFN 498 (502)
Q Consensus 434 t~d~~~~~~---~~~~l~~g~v~iN~~~~~~-----------~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~~~~~~ 498 (502)
|+|.+.+++ +++++++|+|+||++..+. +.+++ |++..|.+...+..+.++|.+.|+|..+..+
T Consensus 374 t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~~ 451 (452)
T 3my7_A 374 TNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTL-GCGSWGGNSISENVGPKHLINKKTVAKRAEN 451 (452)
T ss_dssp SCTTTCHHHHHHHHHHCCCSEEEESCCCC-----------------------------CCCCCGGGGEEEEEEECCC--
T ss_pred cCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCceEee-eccccCCCccCCCCChhHeeeeeEEEeecCC
Confidence 999888777 9999999999999975431 12222 5556666667777899999999998776543
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.73 E-value=0.038 Score=54.84 Aligned_cols=336 Identities=18% Similarity=0.196 Sum_probs=174.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC-H---HH--Hhhcc---------------HHHHHHHHHHHH
Q 010735 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL-H---SW--AKMGD---------------IPGAANTLRYYA 134 (502)
Q Consensus 76 ~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~-~---~~--~~~~e---------------v~~~~~~l~~~~ 134 (502)
.|+.....+-.+..+.+.+-++++.|+-+...++...+- . .+ ....| +..+.+.++.|.
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~~l~~~~~~ai~~A~~~I~~fh 105 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQALPAEQAKALREAAERIRAYA 105 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 355555666666677777777776665444444433221 0 00 00112 223333333333
Q ss_pred HhhhhhcCeeeecccccccceeecCCeEEEEEcCCC---hhHHhhhhhHHHHHHcCCe-EEE-ecCCCcHHHHHHHHHHH
Q 010735 135 GAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWN---FPTTMFFMKVSPALAAGCT-MIV-KPAEQTPLIALYFAHLA 209 (502)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~i~~ALaaGN~-vv~-kps~~~~~~~~~l~~~l 209 (502)
..... ........+|.....++.|+--|++..|.- ||-.. +...+||-.+|.. +|+ -|++. -.....+.-+.
T Consensus 106 ~~Q~~-~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~~-G~i~p~iL~AA 182 (423)
T 4gic_A 106 ERQKL-DSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSV-LMNAVPAKVAGVPELIMAVPAPR-GELNALVLAAA 182 (423)
T ss_dssp HHHCC-CCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHH-HHHHHHHHHHTCSEEEEECCCGG-GCCCHHHHHHH
T ss_pred Hhccc-CCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHH-HHhhccHHHhCCCeEEEecCCCC-CCccHHHHHHH
Confidence 21111 111122235566678889999999999943 66444 4457899999987 333 44332 11222233344
Q ss_pred HHcCCCCceEEEecCCchhHHHHHHh----CCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEec-CCCCc--eEEccCC
Q 010735 210 KLAGVPDGVLNVVPGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL-GGKSP--LLIFDDV 282 (502)
Q Consensus 210 ~~aGlP~g~~~~v~g~~~~~~~~l~~----~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~-gG~~~--~iV~~da 282 (502)
..+|+.+ +--+ | |.+.-.+|.- -|.||.|+=.|..-+..+ ++.. .. .|-..+ .|-+= +|-++++
T Consensus 183 ~l~Gv~e--Iy~v-G-GAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v-~g--~VgIDm~AGPSEilViAD~~a 253 (423)
T 4gic_A 183 YISGVDR--VFRI-G-GAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLV-FG--QVGIDMVAGPSEILVISDGRT 253 (423)
T ss_dssp HHHTCCE--EECC-C-HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHH-BT--TBEECCCCCCCEEEEEECSCS
T ss_pred HhcCCcE--EEEc-C-ChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHh-cC--CcCcccccccceEEEEeCCCC
Confidence 5567543 2212 2 4444455543 578999988888776543 3322 11 122222 23333 3346679
Q ss_pred CHHHHHHHHHHHHhccCCCCcCCCcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 010735 283 DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGK 362 (502)
Q Consensus 283 dl~~aa~~iv~~~~~~~Gq~C~s~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~ 362 (502)
|.+..+..++.-+=... . .+.++|..+ ++|.+++.+.+.+..-.-| .. +.+ +.+.
T Consensus 254 ~p~~vAaDLlsQAEHd~----~-a~~iLvT~s--~~la~~V~~~i~~~l~~l~-----------r~---~i~----~~sl 308 (423)
T 4gic_A 254 DPDWIAMDLFSQAEHDE----D-AQAILISPD--AAHLEAVQASIERLLPGME-----------RA---EVI----RTSL 308 (423)
T ss_dssp CHHHHHHHHHHHHTTCT----T-CEEEEEESC--HHHHHHHHHHHHHHGGGCT-----------TH---HHH----HHHH
T ss_pred CHHHHHHHHHHhhccCC----C-CeEEEEeCc--HHHHHHHHHHHHHHHhhCc-----------cH---HHH----HHHH
Confidence 99998888876544432 2 344666555 3444444444433211001 11 111 1111
Q ss_pred HcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 010735 363 REGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 442 (502)
Q Consensus 363 ~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~ 442 (502)
.+ +| .++.++|++|+++++|..- .=..-|.++|+. .
T Consensus 309 ~~-------------------------------------~g---~ii~v~~~~ea~~~~N~~A-PEHLel~~~~~~---~ 344 (423)
T 4gic_A 309 ER-------------------------------------RG---GMILVDDLEQAAAVANRIA-PEHLELSVESPE---V 344 (423)
T ss_dssp HH-------------------------------------HC---EEEECSSHHHHHHHHHHHC-CSEEEEESSCHH---H
T ss_pred hc-------------------------------------Cc---eEEEEeehHHHHHHHHhhC-hHHhhhhhCCHH---H
Confidence 10 11 3456799999999999843 236778888874 4
Q ss_pred HHhhcc-eeEEEEcCcCCC--CCC--CCcCCCCCCCCCCcchHHHHHhhhhccEE
Q 010735 443 VSRSIR-AGIIWINCYFAF--DSD--CPYGGYKMSGFGRDCGLESLHNYLQVKSV 492 (502)
Q Consensus 443 ~~~~l~-~g~v~iN~~~~~--~~~--~pfgG~~~SG~g~~~g~~~~~~~~~~k~v 492 (502)
+..+++ +|.|++..++.. ..+ .|-.=.+.+|..|+.+.-+...|++..++
T Consensus 345 ~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 345 LVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp HGGGCCCCSEEEEC----------------CCCCTTGGGTCCCCCGGGGEEEEEE
T ss_pred HHhhCcEeceeecCCCCchhhhhcCcCCCccCCCCCcccccCCCCHHHeeeeeeE
Confidence 677775 899999886531 111 11111334566777777788888887655
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=97.13 E-value=0.16 Score=50.44 Aligned_cols=257 Identities=19% Similarity=0.253 Sum_probs=148.5
Q ss_pred cccccceeecCCeEEEEEcCC---ChhHHhhhhhHHHHHHcCCeEEE--ecCCCcHHHHHHHHHHHHHcCCCCceEEEec
Q 010735 149 RALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIV--KPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 223 (502)
Q Consensus 149 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~i~~ALaaGN~vv~--kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~ 223 (502)
.|.....++.|+--|++..|. -||-. ++...+||-.+|..=|+ -|+.-.| .+.-....+|+.+ +--+
T Consensus 113 ~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~i~p----~iL~AA~l~Gv~e--Iy~v- 184 (434)
T 1kae_A 113 PGVRCQQVTRPVASVGLYIPGGSAPLFST-VLMLATPASIAGCKKVVLCSPPPIAD----EILYAAQLCGVQD--VFNV- 184 (434)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCTHH-HHHHHHHHHHHTCSEEEEEECSSCCH----HHHHHHHHTTCCE--EEEC-
T ss_pred CCcEEEEEEeehheEEEEecCCCCCchhH-HHHhhccHhhcCCCeEEEECCCCCCH----HHHHHHHHcCCCE--Eeec-
Confidence 355566778899999999996 45544 45557899999987554 3432233 2233345566543 2222
Q ss_pred CCchhHHHHHHh----CCCcCEEEEcCCcHHHHHHHHHHhcCCCCceEEec-CCCCc--eEEccCCCHHHHHHHHHHHHh
Q 010735 224 GFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL-GGKSP--LLIFDDVDVNTAADMALLGIL 296 (502)
Q Consensus 224 g~~~~~~~~l~~----~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~~~e~-gG~~~--~iV~~dadl~~aa~~iv~~~~ 296 (502)
| |.+.-.+|.- -|.||.|+=.|..-+..+ |+........|-..+ .|-+= +|-|++||.+..+..++.-+=
T Consensus 185 G-GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~A--Kr~Vs~~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAE 261 (434)
T 1kae_A 185 G-GAQAIAALAFGTESVPKVDKIFGPGNAFVTEA--KRQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAE 261 (434)
T ss_dssp C-HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHHHCTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred c-cHHHHHHHHcCCCCCCCccEEECCCcHHHHHH--HHHhHhhcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhc
Confidence 3 4444444432 478999988887765443 221100011222222 23333 334667999998888876543
Q ss_pred ccCCCCcCCCcEEEEecc--cHHHHHHHHHHHHhccccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcc
Q 010735 297 FNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 374 (502)
Q Consensus 297 ~~~Gq~C~s~~~v~V~~~--i~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~ 374 (502)
... . .+.++|..+ ..++..+++.++++.+. .. + ..+.+.
T Consensus 262 Hd~----~-a~aiLvT~s~~la~~V~~ev~~ql~~lp---------------r~---~----ia~~sl------------ 302 (434)
T 1kae_A 262 HGP----D-SQVILLTPAADMARRVAEAVERQLAELP---------------RA---E----TARQAL------------ 302 (434)
T ss_dssp TCT----T-CEEEEEESCHHHHHHHHHHHHHHHTTCT---------------TH---H----HHHHHH------------
T ss_pred cCC----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------hH---H----HHHHHH------------
Confidence 332 2 344566554 23444444444444321 01 1 111111
Q ss_pred cCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhhc-ceeEEE
Q 010735 375 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIW 453 (502)
Q Consensus 375 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l-~~g~v~ 453 (502)
..- .|+.++|++||++++|..-. =..-|.++|+. .+..++ .+|.|+
T Consensus 303 ----------------------------~~~-~ii~v~~l~ea~~~~N~~AP-EHLel~~~dp~---~~l~~I~nAGaIF 349 (434)
T 1kae_A 303 ----------------------------NAS-RLIVTKDLAQCVEISNQYGP-EHLIIQTRNAR---ELVDSITSAGSVF 349 (434)
T ss_dssp ----------------------------TTC-EEEECSSHHHHHHHHHHHCC-SEEEEESTTHH---HHGGGCCSCSEEE
T ss_pred ----------------------------HcC-eEEEECCHHHHHHHHHHhhh-HhhhhhhcCHH---HHHhhcCcccchh
Confidence 112 45678999999999998432 36788899874 566777 589999
Q ss_pred EcCcCC---------CCCCCCcCCCCCCCCCCcchHHHHHhhhhccEEE
Q 010735 454 INCYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 493 (502)
Q Consensus 454 iN~~~~---------~~~~~pfgG~~~SG~g~~~g~~~~~~~~~~k~v~ 493 (502)
+..++. .+.-+|- +|..|+.+.-+.+.|++.-++.
T Consensus 350 lG~~tpe~~GDY~aG~NHvLPT-----~G~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 350 LGDWSPESAGDYASGTNHVLPT-----YGYTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp ESTTCCHHHHHHTSSSCCCCCC-----TTGGGTCCCSCGGGGEEEEEEE
T ss_pred cCCCCchhhcccccCCCcccCC-----CCceeccCCCcHHhccceeeEE
Confidence 998754 1223444 4566777777888888876653
No 55
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=65.89 E-value=24 Score=28.57 Aligned_cols=74 Identities=12% Similarity=0.193 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceEe-----cEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhc
Q 010735 349 KQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE-----PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANN 423 (502)
Q Consensus 349 ~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~-----Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 423 (502)
...+....++++..+.|.-+-.+|-.+...+..+. |+|.+..-.+ .+|..|= +.|+.++|.|||++++..
T Consensus 30 ~~~~~~~~~~~~l~~~G~lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lgG-~~iie~~s~deA~e~A~~ 104 (124)
T 1s7i_A 30 AIVDECMTYSDQLGKAGHYIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLGG-FYLIEARDLNQALQIAAK 104 (124)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEEE-EEEEEESSHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCEEEecCcCCCCcceEEEEecCCceeEecCCCcC----Cccccee-EEEEEeCCHHHHHHHHHh
Confidence 44556666777767777433222222211232222 3444332222 3566664 567799999999999998
Q ss_pred CCCC
Q 010735 424 TRYG 427 (502)
Q Consensus 424 ~~~g 427 (502)
.++.
T Consensus 105 ~P~~ 108 (124)
T 1s7i_A 105 IPPG 108 (124)
T ss_dssp CGGG
T ss_pred CCcc
Confidence 7764
No 56
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=62.68 E-value=16 Score=30.96 Aligned_cols=114 Identities=16% Similarity=0.133 Sum_probs=73.4
Q ss_pred eEEEEEcCCCh-hHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHH-cCCCCceEEEecC-CchhHHHHHHhCC
Q 010735 161 GVVGHIIPWNF-PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPG-FGPTAGAAIASHM 237 (502)
Q Consensus 161 Gvv~~i~p~n~-P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~-aGlP~g~~~~v~g-~~~~~~~~l~~~~ 237 (502)
|.|+++..-+. +-...+.+-...+..|..++--. -|+ +.|.+ .|+|-..++-++. .++++++.+. +-
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT~-----gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~-~g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATG-----TTG----NLISRATGMNVNAMLSGPMGGDQQVGALIS-EG 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEET-----THH----HHHHHHHCCCCEEECCGGGTHHHHHHHHHH-TT
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEcc-----HHH----HHHHHHhCceeEEEEecCCCCCchHHHHHH-CC
Confidence 65665555443 44444555555666788776532 233 44555 8999776664443 2345556555 55
Q ss_pred CcCEEEEcCC-------cHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCC
Q 010735 238 DIDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300 (502)
Q Consensus 238 ~v~~V~ftGs-------~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~G 300 (502)
.|++|+||-+ ...+..|.+.|. ....|+...+ ..++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~-~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLAT-VWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHH-HTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 7999999876 356788888877 6677877654 567788888777764
No 57
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=60.14 E-value=23 Score=27.42 Aligned_cols=60 Identities=25% Similarity=0.375 Sum_probs=36.9
Q ss_pred CHHHHHHHHHHHHHHH-HcCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCC
Q 010735 347 DKKQFDRILSYIEHGK-REGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR 425 (502)
Q Consensus 347 ~~~~~~~~~~~i~~a~-~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 425 (502)
+++.+++..+....+. .-|++++..|.. |.++.. ++ .+-+.|+.|+|.++|.++.|+.+
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~---------~~~~eG-~~----------~~~~viieFpS~~aa~~~~~s~~ 75 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGGS---------VTELEG-TA----------RARNVVIEFPSVQHAIDCYNSPE 75 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCC---------EEEEES-CC----------CSEEEEEEESSHHHHHHHHHSHH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECCC---------ceEEec-CC----------cCeEEEEECCCHHHHHHHHcCHH
Confidence 3444444444444433 357788776643 234432 11 23678999999999999999765
Q ss_pred C
Q 010735 426 Y 426 (502)
Q Consensus 426 ~ 426 (502)
|
T Consensus 76 Y 76 (99)
T 2fiu_A 76 Y 76 (99)
T ss_dssp H
T ss_pred H
Confidence 4
No 58
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=60.01 E-value=24 Score=30.65 Aligned_cols=37 Identities=22% Similarity=0.370 Sum_probs=31.8
Q ss_pred cCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCC
Q 010735 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (502)
Q Consensus 186 aGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~ 225 (502)
++|-+|+|..|-. +..++.++.+.++|++++..+.|+
T Consensus 116 ~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 116 NQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp CSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecC
Confidence 6999999988765 677888888888999999999884
No 59
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=55.64 E-value=13 Score=33.71 Aligned_cols=69 Identities=10% Similarity=0.157 Sum_probs=48.6
Q ss_pred hhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHH
Q 010735 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (502)
Q Consensus 177 ~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~ 253 (502)
+..++..+.+||-||++.++ +.....+..+|... +|.+.+.+++. +++- ...-..+.+.++.+...-..
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~-s~~Y----~~~~~cnilgls~~v~iP~~ 89 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPY-SSQY----EEAYRCNFLGLSPHVQIPPH 89 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEE-ESSC----CCTTTCSEEEECTTCCCCHH
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhcccc-chhh----cchhheeeecCCCCcccCcc
Confidence 45567788899999999876 55666677888888 99999999865 2221 22234677777777654433
No 60
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=54.22 E-value=18 Score=31.42 Aligned_cols=120 Identities=17% Similarity=0.076 Sum_probs=77.0
Q ss_pred eeecCC-eEEEEEcCCCh-hHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHH-cCCCCceEEEecC-CchhHH
Q 010735 155 TLREPI-GVVGHIIPWNF-PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPG-FGPTAG 230 (502)
Q Consensus 155 ~~~~P~-Gvv~~i~p~n~-P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~-aGlP~g~~~~v~g-~~~~~~ 230 (502)
....|. |.|+++..-+- +-...+.+-...|+.|..++- +.-|+ +.|.+ .|+|-..++-++. .++.++
T Consensus 21 ~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~pqI~ 91 (178)
T 1vmd_A 21 KIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTG----ALLQEKLGLKVHRLKSGPLGGDQQIG 91 (178)
T ss_dssp EEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHH
T ss_pred eeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHH----HHHHHHhCceeEEEeecCCCCCchHH
Confidence 334454 76666655443 444445555566767887764 33444 44555 8999766654432 234555
Q ss_pred HHHHhCCCcCEEEEcCC-------cHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCC
Q 010735 231 AAIASHMDIDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300 (502)
Q Consensus 231 ~~l~~~~~v~~V~ftGs-------~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~G 300 (502)
+.+. .-.|++|+||-. ...+..|.+.|. ....|+...+ ..|+.++.+.+++..
T Consensus 92 d~I~-~geIdlVInt~dPl~~~~h~~D~~~IRR~A~-~~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 92 AMIA-EGKIDVLIFFWDPLEPQAHDVDVKALIRIAT-VYNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHHH-TTSCCEEEEECCSSSCCTTSCCHHHHHHHHH-HTTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred HHHH-CCCccEEEEccCccCCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 5554 557999999876 346788888877 6677877654 567888888888764
No 61
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=49.00 E-value=26 Score=29.12 Aligned_cols=63 Identities=13% Similarity=0.035 Sum_probs=44.5
Q ss_pred HHHHHHcCCCCceEEEecCC-c----hhHHHHHHhCCCcCEEEEcCCc-----HHHHHHHHHHhcCCCCceEEec
Q 010735 206 AHLAKLAGVPDGVLNVVPGF-G----PTAGAAIASHMDIDKVSFTGST-----DVGRQVMQAAATSNLKPVSLEL 270 (502)
Q Consensus 206 ~~~l~~aGlP~g~~~~v~g~-~----~~~~~~l~~~~~v~~V~ftGs~-----~~g~~i~~~aa~~~~~~~~~e~ 270 (502)
++.|.+.|+|-..++-++.. . +.+.+.+.+ -+|++|++|-+. ..+..|.+.|. ....|++..+
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~-g~i~lVInt~~~~~~~~~d~~~iRR~Av-~~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRD-GSIDLVINLPNNNTKFVHDNYVIRRTAV-DSGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHT-TSCCEEEECCCCCGGGHHHHHHHHHHHH-HTTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHC-CCceEEEECCCCCCcCCccHHHHHHHHH-HhCCCeEcCH
Confidence 45567899998877766642 2 556666654 579999998765 36777888777 6778877654
No 62
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=45.71 E-value=46 Score=25.38 Aligned_cols=60 Identities=12% Similarity=0.187 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHHHHHH-cCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhcCC
Q 010735 347 DKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR 425 (502)
Q Consensus 347 ~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 425 (502)
+++.+++..+....+.. -|++++..| .. .++.+.. -...+.|+.|+|.+.|.++.|+.+
T Consensus 15 d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~~---------~~lEG~~----------~~~~~viieFps~~aa~a~y~Spe 74 (94)
T 3lo3_A 15 DAEKLQQYGARVASTLAKYSGEVLVKG-SV---------EQLHGKF----------EHKAQVILEFPSREDAYNWYHSEE 74 (94)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEEE-EC---------EEEESCC----------CCSEEEEEEESSHHHHHHHHHSHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEc-cc---------ccccCCC----------CCCeEEEEECCCHHHHHHHHCCHH
Confidence 44555555555554443 477777666 32 2443210 125689999999999999999865
Q ss_pred C
Q 010735 426 Y 426 (502)
Q Consensus 426 ~ 426 (502)
|
T Consensus 75 Y 75 (94)
T 3lo3_A 75 Y 75 (94)
T ss_dssp H
T ss_pred H
Confidence 5
No 63
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=40.84 E-value=20 Score=30.64 Aligned_cols=51 Identities=18% Similarity=0.218 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhC--CCcCEEEEcCCcHHHH
Q 010735 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVGR 252 (502)
Q Consensus 201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~--~~v~~V~ftGs~~~g~ 252 (502)
.+..+++.+.+.|...-...+++.+ +.+.+.|.+. .+.|.|+.||++..+.
T Consensus 28 n~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 28 CGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp HHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 4567788899999876667788776 6666666442 3589999999987543
No 64
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=40.69 E-value=1e+02 Score=26.36 Aligned_cols=37 Identities=22% Similarity=0.379 Sum_probs=30.0
Q ss_pred HcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCC
Q 010735 185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (502)
Q Consensus 185 aaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~ 225 (502)
.+||-+|+|..|-. +..++.++...++| +++..+.|+
T Consensus 110 ~~~nlvVikT~PG~---A~~vA~~iD~~~~~-eIlGTIAGD 146 (170)
T 3lap_A 110 DSGNLAVLRTPPGA---AHYLASAIDRAALP-QVVGTIAGD 146 (170)
T ss_dssp EETTEEEEECSTTC---HHHHHHHHHHHTCT-TEEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCC-CeEEEEecC
Confidence 36999999988665 67788888888776 688888874
No 65
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=39.43 E-value=18 Score=29.82 Aligned_cols=80 Identities=16% Similarity=0.114 Sum_probs=49.5
Q ss_pred HHHHHHcCCeEEEecCCCcHHHHHHHHHHHHH-cCCCCceEEEec-CCchhHHHHHHhCCCcCEEEEcCC-------cHH
Q 010735 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVP-GFGPTAGAAIASHMDIDKVSFTGS-------TDV 250 (502)
Q Consensus 180 i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~-aGlP~g~~~~v~-g~~~~~~~~l~~~~~v~~V~ftGs-------~~~ 250 (502)
-...+..|..++- +.-|+ +.|.+ .|++-..++-++ +.++.+++.+. +-.|++|+||-+ ...
T Consensus 24 ~~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~-~geIdlVInt~~pl~~~~h~~D 93 (134)
T 2xw6_A 24 RHREVLARFPLVA-----TGTTG----RRIEEATGLTVEKLLSGPLGGDQQMGARVA-EGRILAVIFFRDPLTAQPHEPD 93 (134)
T ss_dssp HTHHHHTTSCEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHHH-TTCEEEEEEECCTTTCCTTSCC
T ss_pred HHHHHhCCCEEEE-----ccHHH----HHHHHhhCceEEEEEecCCCCcchHHHHHH-CCCccEEEEccCcccCCCccch
Confidence 3344555665553 23344 44555 799977776565 43455666655 457999999877 335
Q ss_pred HHHHHHHHhcCCCCceEEec
Q 010735 251 GRQVMQAAATSNLKPVSLEL 270 (502)
Q Consensus 251 g~~i~~~aa~~~~~~~~~e~ 270 (502)
+..|.+.|. ....|+...+
T Consensus 94 ~~~IrR~A~-~~~IP~~T~l 112 (134)
T 2xw6_A 94 VQALLRVCD-VHGVPLATNP 112 (134)
T ss_dssp SHHHHHHHH-HHTCCEECSH
T ss_pred HHHHHHHHH-HcCCCeEcCH
Confidence 677877776 5566766543
No 66
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=37.44 E-value=96 Score=21.11 Aligned_cols=45 Identities=16% Similarity=0.306 Sum_probs=32.1
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 010735 57 DKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLE 107 (502)
Q Consensus 57 ~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~ 107 (502)
+.++.++.+++.-+|-..|.|.. ..+|+-+..-|.+-++.|+..+
T Consensus 6 t~eq~~aILkaLdeaIe~GPWe~------SNFLRvIGKnL~eIRd~F~~~i 50 (57)
T 3fxd_A 6 SDEQKETILKALNDAIEKGPWDK------SNFLRVIGKKLIAIRDRFLKRI 50 (57)
T ss_dssp CHHHHHHHHHHHHHHHHHSCTTS------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCchH------HHHHHHHHHhHHHHHHHHHHHh
Confidence 55666666666666655557976 4568888888888888887765
No 67
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=37.43 E-value=22 Score=31.08 Aligned_cols=52 Identities=19% Similarity=0.074 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhC--CCcCEEEEcCCcHHHH
Q 010735 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVGR 252 (502)
Q Consensus 201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~--~~v~~V~ftGs~~~g~ 252 (502)
....+++.+.+.|...-...+++.+.+.+.+.|... .+.|.|+.||++..+.
T Consensus 50 n~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 50 SGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 557788899999987666777776555555555442 4689999999987554
No 68
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=36.45 E-value=64 Score=23.12 Aligned_cols=36 Identities=11% Similarity=0.152 Sum_probs=29.3
Q ss_pred cCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCC
Q 010735 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (502)
Q Consensus 186 aGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~ 225 (502)
++|-+|+|..|-. +..++.++.+.++|+ ++..+.|+
T Consensus 12 ~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGD 47 (71)
T 1b4b_A 12 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGD 47 (71)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeC
Confidence 6899999988655 677888898887776 88888874
No 69
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=36.14 E-value=69 Score=23.51 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=29.4
Q ss_pred cCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCC
Q 010735 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (502)
Q Consensus 186 aGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~ 225 (502)
++|-+|+|..|-. +..++.++.+..+|+ ++..+.|+
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 6999999988655 677888898887776 88888874
No 70
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=35.19 E-value=58 Score=27.87 Aligned_cols=52 Identities=19% Similarity=0.020 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHH---hCCCcCEEEEcCCcHHH
Q 010735 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA---SHMDIDKVSFTGSTDVG 251 (502)
Q Consensus 200 ~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~---~~~~v~~V~ftGs~~~g 251 (502)
..+..|++.|.+.|+..-...+++.+.+.+.+++. ...+.|.|+.||+...+
T Consensus 40 ~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 35677899999999876666777664444555443 34568999999998744
No 71
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=35.18 E-value=50 Score=24.26 Aligned_cols=37 Identities=19% Similarity=0.373 Sum_probs=30.9
Q ss_pred cCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCC
Q 010735 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (502)
Q Consensus 186 aGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~ 225 (502)
++|-+|+|..|-. +..++.++.+.+.+++++..+.|+
T Consensus 14 ~~n~vVikT~PG~---A~~va~~iD~~~~~~~I~GTIAGD 50 (78)
T 1xxa_A 14 NDAVVVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGD 50 (78)
T ss_dssp CSSCEEEEESTTT---HHHHHHHHTTTTTTTTEEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhcCCCCCeEEEEecC
Confidence 6899999988654 677888888887888999999884
No 72
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=33.98 E-value=78 Score=26.24 Aligned_cols=65 Identities=8% Similarity=0.095 Sum_probs=42.4
Q ss_pred cCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccceeeceEEEEEeCCHHHHHHHHhc
Q 010735 345 QVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANN 423 (502)
Q Consensus 345 l~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 423 (502)
+.+++.+++..+....+.. -|++++..|... .++..... |.+ ..+.|+.|+|.+.|+++.++
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~~---------~~lEG~~~-------e~~-~~~viieFPS~~aa~a~y~S 107 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQFE---------LMLIGPQD-------EHW-DHVFIAEYPSVAAFVEMIRD 107 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---------EEEESCTT-------CCC-SEEEEEEESCHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCCc---------eeEECCCC-------CCC-CeEEEEECCCHHHHHHHHcC
Confidence 5566777776666665554 478888766532 24433111 111 46789999999999999887
Q ss_pred CCC
Q 010735 424 TRY 426 (502)
Q Consensus 424 ~~~ 426 (502)
..|
T Consensus 108 peY 110 (143)
T 3hhl_A 108 PVY 110 (143)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 73
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=30.97 E-value=41 Score=27.52 Aligned_cols=49 Identities=16% Similarity=0.083 Sum_probs=31.8
Q ss_pred ceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcCCCCce
Q 010735 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 266 (502)
Q Consensus 217 g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~ 266 (502)
+.+++++|+.++........+++.+|++||+......+.+.|. ..+.|+
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~-~~~ipv 101 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAE-ERGVPV 101 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHH-HHTCCE
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHH-HCCCeE
Confidence 5677777766554444333256889999999887777777654 333443
No 74
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=29.97 E-value=63 Score=23.96 Aligned_cols=36 Identities=14% Similarity=0.143 Sum_probs=29.2
Q ss_pred cCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCC
Q 010735 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (502)
Q Consensus 186 aGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~ 225 (502)
++|-+|+|..|-. +..++.++.+.++|+ ++..+.|+
T Consensus 24 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 59 (83)
T 2p5m_A 24 ASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGD 59 (83)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 6999999988655 677888898887776 88888774
No 75
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=28.13 E-value=36 Score=29.41 Aligned_cols=53 Identities=17% Similarity=0.004 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHh---CCCcCEEEEcCCcHHHH
Q 010735 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVGR 252 (502)
Q Consensus 200 ~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~---~~~v~~V~ftGs~~~g~ 252 (502)
.....+++.+.+.|...-...+++.+.+.+.+.|.+ ..+.|.|+.||++..+.
T Consensus 40 sn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~ 95 (178)
T 2pjk_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP 95 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST
T ss_pred hHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 456778889999998766666777654555555533 22489999999987543
No 76
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=26.56 E-value=38 Score=28.90 Aligned_cols=52 Identities=21% Similarity=0.178 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHh---CCCcCEEEEcCCcHHH
Q 010735 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVG 251 (502)
Q Consensus 200 ~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~---~~~v~~V~ftGs~~~g 251 (502)
..+..+++.|.+.|+......+++.+.+.+.+.|.. ..+.|.|+.||+...+
T Consensus 31 sn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 31 KSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred ChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 345678888999998766667776654455555533 2368999999998644
No 77
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=25.35 E-value=3.4e+02 Score=25.78 Aligned_cols=139 Identities=12% Similarity=0.021 Sum_probs=76.3
Q ss_pred EEEEcCCChhHHhhhhhHHHHHHcCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEE
Q 010735 163 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 242 (502)
Q Consensus 163 v~~i~p~n~P~~~~~~~i~~ALaaGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V 242 (502)
+++|+..+.- .....+++...+.-|+--....+..+..+++ +.|.+. + +. + -+.|..++++|+|
T Consensus 29 vgiiG~G~~~----~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~---~~~~~~----~-~~---~-~~~ll~~~~vD~V 92 (361)
T 3u3x_A 29 FAAVGLNHNH----IYGQVNCLLRAGARLAGFHEKDDALAAEFSA---VYADAR----R-IA---T-AEEILEDENIGLI 92 (361)
T ss_dssp EEEECCCSTT----HHHHHHHHHHTTCEEEEEECSCHHHHHHHHH---HSSSCC----E-ES---C-HHHHHTCTTCCEE
T ss_pred EEEECcCHHH----HHHHHHHhhcCCcEEEEEEcCCHHHHHHHHH---HcCCCc----c-cC---C-HHHHhcCCCCCEE
Confidence 4555555421 1234455554455554444555555554444 333221 1 22 1 3556778899999
Q ss_pred EEcCCcHHHHHHHHHHhcCCCCceEEecCCCCceEEccCCCHHHHHHHHHHHHhccCCCCcCCCcEEEE-ecccHH-HHH
Q 010735 243 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV-QEGIYD-EFE 320 (502)
Q Consensus 243 ~ftGs~~~g~~i~~~aa~~~~~~~~~e~gG~~~~iV~~dadl~~aa~~iv~~~~~~~Gq~C~s~~~v~V-~~~i~~-~f~ 320 (502)
+....+..-..+...+. ..+|.|++|-+- ..+++.+- .++..+ ..+|. .+.| +...++ ...
T Consensus 93 ~I~tp~~~H~~~~~~al-~aGkhVl~EKPl--------a~~~~ea~-~l~~~a-~~~g~------~l~v~~~~R~~~p~~ 155 (361)
T 3u3x_A 93 VSAAVSSERAELAIRAM-QHGKDVLVDKPG--------MTSFDQLA-KLRRVQ-AETGR------IFSILYSEHFESPAT 155 (361)
T ss_dssp EECCCHHHHHHHHHHHH-HTTCEEEEESCS--------CSSHHHHH-HHHHHH-HTTCC------CEEEECHHHHTCHHH
T ss_pred EEeCChHHHHHHHHHHH-HCCCeEEEeCCC--------CCCHHHHH-HHHHHH-HHcCC------EEEEechHhhCCHHH
Confidence 99888887777777766 567888887531 23455543 344332 22342 2333 333464 667
Q ss_pred HHHHHHHhccccCC
Q 010735 321 KKLVEKAKAWVVGD 334 (502)
Q Consensus 321 ~~l~~~~~~~~~g~ 334 (502)
..+++.+++=.+|+
T Consensus 156 ~~~k~~i~~g~iG~ 169 (361)
T 3u3x_A 156 VKAGELVAAGAIGE 169 (361)
T ss_dssp HHHHHHHHTTTTSS
T ss_pred HHHHHHHHcCCCCC
Confidence 78888877655554
No 78
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=24.53 E-value=36 Score=29.19 Aligned_cols=51 Identities=22% Similarity=0.152 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHh---CCCcCEEEEcCCcHHH
Q 010735 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVG 251 (502)
Q Consensus 201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~---~~~v~~V~ftGs~~~g 251 (502)
.+..+++.|.+.|+..-...+++.+.+.+.+.|.. ..+.|.|+.||+...+
T Consensus 29 n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~ 82 (172)
T 1mkz_A 29 SGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLT 82 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSS
T ss_pred cHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCC
Confidence 44668888899998655566776654455555433 2247899999998644
No 79
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=23.46 E-value=76 Score=29.33 Aligned_cols=88 Identities=9% Similarity=0.051 Sum_probs=54.2
Q ss_pred EEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhCCCcCEEEEcCCcHHHHHHHHHHhcC-CCCc-eE
Q 010735 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-NLKP-VS 267 (502)
Q Consensus 190 vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~-~~~~-~~ 267 (502)
+|.+|.+.+......+.+.|.+.|+. + ...+.|.|+.-|+..+-....+..... ..+| +-
T Consensus 5 ii~n~~~~~~~~~~~l~~~l~~~g~~-----v-------------~~~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilG 66 (272)
T 2i2c_A 5 ITSKGDEKSDLLRLNMIAGFGEYDME-----Y-------------DDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIG 66 (272)
T ss_dssp EEECCSHHHHHHHHHHHHHHTTSSCE-----E-------------CSSSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEE
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCE-----e-------------CCCCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEE
Confidence 45565444444455566667777643 1 024579999999999999888886522 2567 44
Q ss_pred EecCCCCceEEccCCCHHHHHHHHHHHH
Q 010735 268 LELGGKSPLLIFDDVDVNTAADMALLGI 295 (502)
Q Consensus 268 ~e~gG~~~~iV~~dadl~~aa~~iv~~~ 295 (502)
..+|-.+.+-=....|++.+++.+..+.
T Consensus 67 In~G~lgfl~~~~~~~~~~~l~~l~~g~ 94 (272)
T 2i2c_A 67 IHTGHLGFYADWRPAEADKLVKLLAKGE 94 (272)
T ss_dssp EESSSCCSSCCBCGGGHHHHHHHHHTTC
T ss_pred EeCCCCCcCCcCCHHHHHHHHHHHHcCC
Confidence 4555434221112457888998888764
No 80
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=22.46 E-value=40 Score=29.01 Aligned_cols=50 Identities=18% Similarity=-0.013 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHhC-CCcCEEEEcCCcH
Q 010735 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH-MDIDKVSFTGSTD 249 (502)
Q Consensus 200 ~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~~-~~v~~V~ftGs~~ 249 (502)
..+..|++.|.+.|+......+++.+...+.+.|... .+.|.|+.||+..
T Consensus 23 tN~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~DlVittGG~g 73 (172)
T 3kbq_A 23 TNAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEVSDLVVSSGGLG 73 (172)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHHCSEEEEESCCS
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCEEEEcCCCc
Confidence 3556788899999987766777776544555444321 2368888888876
No 81
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=22.18 E-value=1.2e+02 Score=25.25 Aligned_cols=36 Identities=11% Similarity=0.152 Sum_probs=29.8
Q ss_pred cCCeEEEecCCCcHHHHHHHHHHHHHcCCCCceEEEecCC
Q 010735 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (502)
Q Consensus 186 aGN~vv~kps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~ 225 (502)
++|-+|+|..|-. +..++.++...++|. ++..+.|+
T Consensus 90 ~~n~vVikT~PG~---A~~va~~iD~~~~~e-IlGTIAGD 125 (149)
T 1b4a_A 90 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGD 125 (149)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHTCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 6999999988655 677888898887776 88888874
No 82
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=22.13 E-value=83 Score=25.23 Aligned_cols=80 Identities=11% Similarity=0.166 Sum_probs=47.1
Q ss_pred HHHHHHhccCCCCcCC--CcEEEEecccHHHHHHHHHHHHhccccCCCCCCCCccc-------ccCCHHHHHHHHHHHHH
Q 010735 290 MALLGILFNKGEICVA--SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG-------PQVDKKQFDRILSYIEH 360 (502)
Q Consensus 290 ~iv~~~~~~~Gq~C~s--~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~g-------pl~~~~~~~~~~~~i~~ 360 (502)
..+.......+-.|.. ....+++.+.++++.+.+.+.++.+.-..|..++.... |-.+... +..+++.
T Consensus 36 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~~---~~~ll~~ 112 (135)
T 2v9v_A 36 KLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPARV---YQALLEE 112 (135)
T ss_dssp HHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHHH---HHHHHHH
T ss_pred HHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHHH---HHHHHHH
Confidence 3344444444434443 23448999999999999999998865556655443222 2123333 3456666
Q ss_pred HHHcCCEEEeCC
Q 010735 361 GKREGATLLTGG 372 (502)
Q Consensus 361 a~~~Ga~v~~gg 372 (502)
...+|.-...|+
T Consensus 113 l~~~g~l~~~~~ 124 (135)
T 2v9v_A 113 WSREGRLQLAAN 124 (135)
T ss_dssp HHHTTSEEECSS
T ss_pred HHHCCCEEecCC
Confidence 677786555444
No 83
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=21.24 E-value=5e+02 Score=25.25 Aligned_cols=73 Identities=22% Similarity=0.342 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHcCCC-CceEEEecCCchh----HHHHHHhCCCcCEEEE---cC---CcHHHHHHHHHHhcCC--CCc
Q 010735 199 PLIALYFAHLAKLAGVP-DGVLNVVPGFGPT----AGAAIASHMDIDKVSF---TG---STDVGRQVMQAAATSN--LKP 265 (502)
Q Consensus 199 ~~~~~~l~~~l~~aGlP-~g~~~~v~g~~~~----~~~~l~~~~~v~~V~f---tG---s~~~g~~i~~~aa~~~--~~~ 265 (502)
.-.+...++++..+|+- .+.+.+--+...+ ..+.+.++|++|.|+. +| ...+++.|...+. .. .+|
T Consensus 257 ~Gl~~~t~D~i~~~G~~~aN~lD~gG~a~~e~~~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~~a~~-~~~~~kP 335 (397)
T 3ufx_B 257 AGLVMYTLDLVNRVGGKPANFLDIGGGAKADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALE-EGLLTKP 335 (397)
T ss_dssp HHHHHHHHHHHHHTTCCBSEEEECCSCCCHHHHHHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHHHHHT-TTCCCSC
T ss_pred ccHHHHHHHHHHHcCCCcCCcEecCCCCCHHHHHHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHHHHHH-hhCCCCc
Confidence 33445556778888764 3434333222222 2356788999998763 22 3567787777654 22 467
Q ss_pred eEEecCC
Q 010735 266 VSLELGG 272 (502)
Q Consensus 266 ~~~e~gG 272 (502)
++.-+.|
T Consensus 336 vvv~~~G 342 (397)
T 3ufx_B 336 VVMRVAG 342 (397)
T ss_dssp EEEEEEE
T ss_pred EEEEccC
Confidence 6665554
No 84
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=21.04 E-value=53 Score=28.31 Aligned_cols=50 Identities=12% Similarity=0.040 Sum_probs=33.2
Q ss_pred HHHHHHHHHH---HcCCCCceEEEecCCchhHHHHHHhC---CCcCEEEEcCCcHHH
Q 010735 201 IALYFAHLAK---LAGVPDGVLNVVPGFGPTAGAAIASH---MDIDKVSFTGSTDVG 251 (502)
Q Consensus 201 ~~~~l~~~l~---~aGlP~g~~~~v~g~~~~~~~~l~~~---~~v~~V~ftGs~~~g 251 (502)
.+..+++++. +.|+.. ...+++.+...+.+.|... .+.|.|+.||+...+
T Consensus 26 n~~~l~~~l~~l~~~G~~v-~~~iv~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~g 81 (178)
T 2pbq_A 26 SGKAIIDYLKDVIITPFEV-EYRVIPDERDLIEKTLIELADEKGCSLILTTGGTGPA 81 (178)
T ss_dssp HHHHHHHHHHHHBCSCCEE-EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred hHHHHHHHHHHHHhCCCEE-EEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 4566777777 788866 5667766544555555332 258999999998644
No 85
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=20.40 E-value=33 Score=29.20 Aligned_cols=51 Identities=14% Similarity=0.144 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHh---CCCcCEEEEcCCcHHH
Q 010735 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVG 251 (502)
Q Consensus 201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~---~~~v~~V~ftGs~~~g 251 (502)
.+..+++.|.+.|...-...+++.+.+.+.+.|.. ..+.|.|+.||++..+
T Consensus 22 n~~~l~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 75 (164)
T 2is8_A 22 THLAIREVLAGGPFEVAAYELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLA 75 (164)
T ss_dssp HHHHHHHHHTTSSEEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred hHHHHHHHHHHCCCeEeEEEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 44668888888887655566776654455555533 2258999999998754
No 86
>1wu2_A MOEA protein, molybdopterin biosynthesis MOEA protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1xi8_A
Probab=20.00 E-value=20 Score=35.54 Aligned_cols=52 Identities=15% Similarity=0.138 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHcCCCCceEEEecCCchhHHHHHHh-CCCcCEEEEcCCcHHHH
Q 010735 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS-HMDIDKVSFTGSTDVGR 252 (502)
Q Consensus 201 ~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~~l~~-~~~v~~V~ftGs~~~g~ 252 (502)
....|...+.+.|...-...+++.+.+.+.+.|.. ..+.|.|+.||+...+.
T Consensus 212 n~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlvittGG~s~g~ 264 (396)
T 1wu2_A 212 NSIMLQGLVEKFFGEPILYGVLPDDESIIKETLEKAKNECDIVLITGGSAFGD 264 (396)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHTTHHHHHHHCSEEEECC-------
T ss_pred hHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEeCCCCCCh
Confidence 34568888899998665566776543333333322 12478999999998764
Done!