BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010736
(502 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 138/312 (44%), Gaps = 33/312 (10%)
Query: 75 ISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQXXXXXXXXXXXXXXXQFSGN 134
+SL G++ F + L LDL N +G +PP FSG
Sbjct: 271 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 330
Query: 135 IPHEVGL-MSHLKILYIDSNQLDGSIPLEVGQLS-SMVELALFSNNLNGSVPHSLGNLTQ 192
+P + L M LK+L + N+ G +P + LS S++ L L SNN +G + L NL Q
Sbjct: 331 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI---LPNLCQ 387
Query: 193 -----ISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLV 247
+ L+L +N F+G IPP + N + L L+ N SG IP SLG+L+ L+ L
Sbjct: 388 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 447
Query: 248 YNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLR 307
N L G IP Q + L+ + N G IP L
Sbjct: 448 LNMLEGEIP-----------------------QELMYVKTLETLILDFNDLTGEIPSGLS 484
Query: 308 NCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISR 367
NCT+L + L N LTG I K G NL + LS N+F G I + G+C L L+++
Sbjct: 485 NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNT 544
Query: 368 NNITGDFGIAKF 379
N G A F
Sbjct: 545 NLFNGTIPAAMF 556
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 143/311 (45%), Gaps = 12/311 (3%)
Query: 69 AGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQXXXXXXXXXXXXXX 128
G + ++++ G + G + S +L +LD+ N F T P
Sbjct: 174 CGELKHLAISGNKISGDVDV---SRCVNLEFLDVSSNN-FSTGIPFLGDCSALQHLDISG 229
Query: 129 XQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSL- 187
+ SG+ + + LK+L I SNQ G IP L S+ L+L N G +P L
Sbjct: 230 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLS 287
Query: 188 GNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPL-SLGNLTNLKQFSL 246
G ++ L L N F G +PP G+ + L+L+ N FSG +P+ +L + LK L
Sbjct: 288 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 347
Query: 247 VYNNLYGSIPPSLDNLVLTKLSLD--DNHFTSYLPQNICRG--GALQIFTVSENRFQGTI 302
+N G +P SL NL + L+LD N+F+ + N+C+ LQ + N F G I
Sbjct: 348 SFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKI 407
Query: 303 PKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGA 362
P +L NC+ L+ + L N L+G I + G L + L N GEI L
Sbjct: 408 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 467
Query: 363 LNISRNNITGD 373
L + N++TG+
Sbjct: 468 LILDFNDLTGE 478
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 17/284 (5%)
Query: 97 LAYLDLRDNKLFGTIPPQXXXXXXXXXXXXXXXQFSGNIPHEVGLMSHLKILYIDSNQLD 156
L L L++N G IPP SG IP +G +S L+ L + N L+
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 157 GSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKS 216
G IP E+ + ++ L L N+L G +P L N T ++ + L +N +G IP IG L++
Sbjct: 453 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 512
Query: 217 ISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSL--------DNLVLTKLS 268
++IL L+ N FSG IP LG+ +L L N G+IP ++ N + K
Sbjct: 513 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRY 572
Query: 269 LDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISK 328
+ + + + C G + FQG + L ++ + G+ S
Sbjct: 573 V---YIKNDGMKKECHGAGNLL------EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSP 623
Query: 329 AFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITG 372
F ++ F+D+S N G I G P L LN+ N+I+G
Sbjct: 624 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 667
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 149/373 (39%), Gaps = 74/373 (19%)
Query: 77 LRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQXXXXXXXXXXXXXXXQFSGNIP 136
L+ G GK+ + S+ L L L N L GTIP G IP
Sbjct: 398 LQNNGFTGKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP 456
Query: 137 HEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISML 196
E+ + L+ L +D N L G IP + +++ ++L +N L G +P +G L +++L
Sbjct: 457 QELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 516
Query: 197 FLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSL--------GNLTNLKQFSLVY 248
L +NSFSG IP ++G+ +S+ L L N F+G IP ++ N K++ +
Sbjct: 517 KLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIK 576
Query: 249 NN-------------------------------------LYGS-IPPSLDN-LVLTKLSL 269
N+ +YG P+ DN + L +
Sbjct: 577 NDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDM 636
Query: 270 DDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKA 329
N + Y+P+ I L I + N G+IP + + L + L N L G I +A
Sbjct: 637 SYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQA 696
Query: 330 FGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFL--------- 380
LT IDLS NN G I P++G F AKFL
Sbjct: 697 MSALTMLTEIDLSNNNLSGPI-------PEMGQFET--------FPPAKFLNNPGLCGYP 741
Query: 381 --KPDSSNWTGFA 391
+ D SN G+A
Sbjct: 742 LPRCDPSNADGYA 754
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 177/434 (40%), Gaps = 96/434 (22%)
Query: 22 EEADALLKWKASLQIHNRSLLSSWIKDTSNVSSKISPCAWSGISCND--------AGRVI 73
E L+ +K L +++LL W SS +PC + G++C D + + +
Sbjct: 9 REIHQLISFKDVLP--DKNLLPDW-------SSNKNPCTFDGVTCRDDKVTSIDLSSKPL 59
Query: 74 NISLRGVG------------------LKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQX 115
N+ V + G + F S+ L LDL N L G +
Sbjct: 60 NVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSA--SLTSLDLSRNSLSGPVTTLT 117
Query: 116 XXXXXXXXXXXXXXQFSGNIPHEV--GL-MSHLKILYIDSNQLDG--------------- 157
+ + P +V GL ++ L++L + +N + G
Sbjct: 118 SLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGEL 177
Query: 158 ----------SIPLEVGQLSSMVELALFSNNLNGSVP----------------------- 184
S ++V + ++ L + SNN + +P
Sbjct: 178 KHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFS 237
Query: 185 HSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSL-GNLTNLKQ 243
++ T++ +L + N F G IPP LKS+ LSLA N+F+G IP L G L
Sbjct: 238 RAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTG 295
Query: 244 FSLVYNNLYGSIPPSLD-NLVLTKLSLDDNHFTSYLPQN-ICRGGALQIFTVSENRFQGT 301
L N+ YG++PP +L L+L N+F+ LP + + + L++ +S N F G
Sbjct: 296 LDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGE 355
Query: 302 IPKSLRNCT-SLIRVRLDGNNLTGNISKAFGIYPNLTFID--LSRNNFYGEISSNFGECP 358
+P+SL N + SL+ + L NN +G I P T + L N F G+I C
Sbjct: 356 LPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCS 415
Query: 359 KLGALNISRNNITG 372
+L +L++S N ++G
Sbjct: 416 ELVSLHLSFNYLSG 429
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 138/312 (44%), Gaps = 33/312 (10%)
Query: 75 ISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQXXXXXXXXXXXXXXXQFSGN 134
+SL G++ F + L LDL N +G +PP FSG
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 135 IPHEVGL-MSHLKILYIDSNQLDGSIPLEVGQLS-SMVELALFSNNLNGSVPHSLGNLTQ 192
+P + L M LK+L + N+ G +P + LS S++ L L SNN +G + L NL Q
Sbjct: 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI---LPNLCQ 390
Query: 193 -----ISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLV 247
+ L+L +N F+G IPP + N + L L+ N SG IP SLG+L+ L+ L
Sbjct: 391 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 450
Query: 248 YNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLR 307
N L G IP Q + L+ + N G IP L
Sbjct: 451 LNMLEGEIP-----------------------QELMYVKTLETLILDFNDLTGEIPSGLS 487
Query: 308 NCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISR 367
NCT+L + L N LTG I K G NL + LS N+F G I + G+C L L+++
Sbjct: 488 NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNT 547
Query: 368 NNITGDFGIAKF 379
N G A F
Sbjct: 548 NLFNGTIPAAMF 559
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 143/311 (45%), Gaps = 12/311 (3%)
Query: 69 AGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQXXXXXXXXXXXXXX 128
G + ++++ G + G + S +L +LD+ N F T P
Sbjct: 177 CGELKHLAISGNKISGDVDV---SRCVNLEFLDVSSNN-FSTGIPFLGDCSALQHLDISG 232
Query: 129 XQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSL- 187
+ SG+ + + LK+L I SNQ G IP L S+ L+L N G +P L
Sbjct: 233 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLS 290
Query: 188 GNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPL-SLGNLTNLKQFSL 246
G ++ L L N F G +PP G+ + L+L+ N FSG +P+ +L + LK L
Sbjct: 291 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 350
Query: 247 VYNNLYGSIPPSLDNLVLTKLSLD--DNHFTSYLPQNICRG--GALQIFTVSENRFQGTI 302
+N G +P SL NL + L+LD N+F+ + N+C+ LQ + N F G I
Sbjct: 351 SFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKI 410
Query: 303 PKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGA 362
P +L NC+ L+ + L N L+G I + G L + L N GEI L
Sbjct: 411 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 470
Query: 363 LNISRNNITGD 373
L + N++TG+
Sbjct: 471 LILDFNDLTGE 481
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 17/284 (5%)
Query: 97 LAYLDLRDNKLFGTIPPQXXXXXXXXXXXXXXXQFSGNIPHEVGLMSHLKILYIDSNQLD 156
L L L++N G IPP SG IP +G +S L+ L + N L+
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 157 GSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKS 216
G IP E+ + ++ L L N+L G +P L N T ++ + L +N +G IP IG L++
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 515
Query: 217 ISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSL--------DNLVLTKLS 268
++IL L+ N FSG IP LG+ +L L N G+IP ++ N + K
Sbjct: 516 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRY 575
Query: 269 LDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISK 328
+ + + + C G + FQG + L ++ + G+ S
Sbjct: 576 V---YIKNDGMKKECHGAGNLL------EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSP 626
Query: 329 AFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITG 372
F ++ F+D+S N G I G P L LN+ N+I+G
Sbjct: 627 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 670
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 149/373 (39%), Gaps = 74/373 (19%)
Query: 77 LRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQXXXXXXXXXXXXXXXQFSGNIP 136
L+ G GK+ + S+ L L L N L GTIP G IP
Sbjct: 401 LQNNGFTGKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP 459
Query: 137 HEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISML 196
E+ + L+ L +D N L G IP + +++ ++L +N L G +P +G L +++L
Sbjct: 460 QELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 519
Query: 197 FLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSL--------GNLTNLKQFSLVY 248
L +NSFSG IP ++G+ +S+ L L N F+G IP ++ N K++ +
Sbjct: 520 KLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIK 579
Query: 249 NN-------------------------------------LYGS-IPPSLDN-LVLTKLSL 269
N+ +YG P+ DN + L +
Sbjct: 580 NDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDM 639
Query: 270 DDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKA 329
N + Y+P+ I L I + N G+IP + + L + L N L G I +A
Sbjct: 640 SYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQA 699
Query: 330 FGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFL--------- 380
LT IDLS NN G I P++G F AKFL
Sbjct: 700 MSALTMLTEIDLSNNNLSGPI-------PEMGQFET--------FPPAKFLNNPGLCGYP 744
Query: 381 --KPDSSNWTGFA 391
+ D SN G+A
Sbjct: 745 LPRCDPSNADGYA 757
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 175/446 (39%), Gaps = 100/446 (22%)
Query: 12 FLVAVSSETNEEADALLKWKASLQIHNRSLLSSWIKDTSNVSSKISPCAWSGISCND--- 68
F + S E L+ +K L +++LL W SS +PC + G++C D
Sbjct: 2 FQASPSQSLYREIHQLISFKDVLP--DKNLLPDW-------SSNKNPCTFDGVTCRDDKV 52
Query: 69 -----AGRVINISLRGVG------------------LKGKLHAFSFSSFPHLAYLDLRDN 105
+ + +N+ V + G + F S+ L LDL N
Sbjct: 53 TSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSA--SLTSLDLSRN 110
Query: 106 KLFGTIPPQXXXXXXX----XXXXXXXXQFSGNIPHEVGLMS------------------ 143
L G + F G + + L S
Sbjct: 111 SLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVG 170
Query: 144 --------HLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVP----------- 184
LK L I N++ G + +V + ++ L + SNN + +P
Sbjct: 171 WVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHL 228
Query: 185 ------------HSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIP 232
++ T++ +L + N F G IPP LKS+ LSLA N+F+G IP
Sbjct: 229 DISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIP 286
Query: 233 LSL-GNLTNLKQFSLVYNNLYGSIPPSLD-NLVLTKLSLDDNHFTSYLPQN-ICRGGALQ 289
L G L L N+ YG++PP +L L+L N+F+ LP + + + L+
Sbjct: 287 DFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLK 346
Query: 290 IFTVSENRFQGTIPKSLRNCT-SLIRVRLDGNNLTGNISKAFGIYPNLTFID--LSRNNF 346
+ +S N F G +P+SL N + SL+ + L NN +G I P T + L N F
Sbjct: 347 VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGF 406
Query: 347 YGEISSNFGECPKLGALNISRNNITG 372
G+I C +L +L++S N ++G
Sbjct: 407 TGKIPPTLSNCSELVSLHLSFNYLSG 432
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 27/241 (11%)
Query: 135 IPHEVGLMSHLKILYIDS-NQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQI 193
IP + + +L LYI N L G IP + +L+ + L + N++G++P L + +
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 194 SMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNL-KQFSLVYNNLY 252
L N+ SG +PP I +L ++ ++ N+ SG IP S G+ + L ++ N L
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 253 GSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSL 312
G IPP+ NL L + L +N+ G A +F +N
Sbjct: 188 GKIPPTFANLNLAFVDLS---------RNMLEGDASVLFGSDKNT--------------- 223
Query: 313 IRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITG 372
++ L N+L ++ K G+ NL +DL N YG + + L +LN+S NN+ G
Sbjct: 224 QKIHLAKNSLAFDLGKV-GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282
Query: 373 D 373
+
Sbjct: 283 E 283
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 128/289 (44%), Gaps = 14/289 (4%)
Query: 22 EEADALLKWKASLQIHNRSLLSSWIKDTSNVSSKISPCAWSGISCN---DAGRVINISLR 78
++ ALL+ K L N + LSSW+ T + W G+ C+ RV N+ L
Sbjct: 6 QDKQALLQIKKDL--GNPTTLSSWLPTTDCCNR-----TWLGVLCDTDTQTYRVNNLDLS 58
Query: 79 GVGL-KGKLHAFSFSSFPHLAYLDLRD-NKLFGTIPPQXXXXXXXXXXXXXXXQFSGNIP 136
G+ L K S ++ P+L +L + N L G IPP SG IP
Sbjct: 59 GLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP 118
Query: 137 HEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQI-SM 195
+ + L L N L G++P + L ++V + N ++G++P S G+ +++ +
Sbjct: 119 DFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTS 178
Query: 196 LFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSI 255
+ + N +G IPP NL +++ + L+ N G + G+ N ++ L N+L +
Sbjct: 179 MTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237
Query: 256 PPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPK 304
+ L L L +N LPQ + + L VS N G IP+
Sbjct: 238 GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 32/198 (16%)
Query: 183 VPHSLGNLTQISMLFLHD-NSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNL 241
+P SL NL ++ L++ N+ G IPP I L + L + SG IP L + L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 242 KQFSLVYNNLYGSIPPSLDNLV-LTKLSLDDNHFTSYLPQNICRGGALQIFT---VSENR 297
YN L G++PPS+ +L L ++ D N + +P + G ++FT +S NR
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSY--GSFSKLFTSMTISRNR 185
Query: 298 FQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGEC 357
G IP + N NL F+DLSRN G+ S FG
Sbjct: 186 LTGKIPPTFANL-------------------------NLAFVDLSRNMLEGDASVLFGSD 220
Query: 358 PKLGALNISRNNITGDFG 375
+++++N++ D G
Sbjct: 221 KNTQKIHLAKNSLAFDLG 238
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 370 ITGDFGIAKFLK-PDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH 428
+ GDFG+AK + D GT G+IAPE T K +EK DV+ +GV++LE+I G+
Sbjct: 182 VVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 241
Query: 429 PRDFLSSTSS---------PSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKE 479
D + L + L+ ++D + + E++ +++V C +
Sbjct: 242 AFDLARLANDDDVMLLDWVKGLLKEKKLEALVD--VDLQGNYKDEEVEQLIQVALLCTQS 299
Query: 480 SPESRPTMKIVSQQL 494
SP RP M V + L
Sbjct: 300 SPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 370 ITGDFGIAKFLK-PDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH 428
+ GDFG+AK + D G G+IAPE T K +EK DV+ +GV++LE+I G+
Sbjct: 174 VVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 233
Query: 429 PRDFLSSTSS---------PSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKE 479
D + L + L+ ++D + + E++ +++V C +
Sbjct: 234 AFDLARLANDDDVMLLDWVKGLLKEKKLEALVD--VDLQGNYKDEEVEQLIQVALLCTQS 291
Query: 480 SPESRPTMKIVSQQL 494
SP RP M V + L
Sbjct: 292 SPMERPKMSEVVRML 306
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 372 GDFGIAKFLKP-DSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI-KGKHP 429
DFG+A+ ++ + + G + APE A + T K DV+SFG+L+ E++ KG+ P
Sbjct: 147 ADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206
Query: 430 RDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P +N L+++ R+P P Q+ IS+ E+ C K+ PE RPT +
Sbjct: 207 --------YPGMNNREVLEQVERGYRMPCP----QDCPISLHELMIHCWKKDPEERPTFE 254
Query: 489 IVS 491
+
Sbjct: 255 YLQ 257
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 13/135 (9%)
Query: 373 DFGIAKF-LKPDSSNWTGFA-GTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH-- 428
DFGI+K + D ++ GT GYI PE ++TEK DVYSFGV++ EV+ +
Sbjct: 182 DFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
Query: 429 ----PRDF--LSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPE 482
PR+ L+ + S N L++++DP L E L + CL S E
Sbjct: 242 VQSLPREMVNLAEWAVESHNNG-QLEQIVDPNL--ADKIRPESLRKFGDTAVKCLALSSE 298
Query: 483 SRPTMKIVSQQLRIS 497
RP+M V +L +
Sbjct: 299 DRPSMGDVLWKLEYA 313
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 17/120 (14%)
Query: 373 DFGIAKFLKPD---SSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+ +++ D SS T F + APE+ + K + K DV++FG+L+ EV GK
Sbjct: 147 DFGMTRYVLDDQYVSSVGTKFPVKWS--APEVFHYFKYSSKSDVWAFGILMWEVFSLGKM 204
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P D + N+++ L RL P + +I ++ +SC E PE RPT +
Sbjct: 205 PYDLYT-------NSEVVLKVSQGHRLYRPHLASD----TIYQIMYSCWHELPEKRPTFQ 253
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 17/137 (12%)
Query: 373 DFGIAKFLKPDSSNWTGF----AGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH 428
DFGI+K K T GT GYI PE ++TEK DVYSFGV++ EV+ +
Sbjct: 182 DFGISK--KGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS 239
Query: 429 ------PRDF--LSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKES 480
PR+ L+ + S N L++++DP L E L + CL S
Sbjct: 240 AIVQSLPREMVNLAEWAVESHNNG-QLEQIVDPNL--ADKIRPESLRKFGDTAVKCLALS 296
Query: 481 PESRPTMKIVSQQLRIS 497
E RP+M V +L +
Sbjct: 297 SEDRPSMGDVLWKLEYA 313
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 14/132 (10%)
Query: 373 DFGIAKFLKPDSSN--WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG---- 426
DFG+A+ + + + GT Y+APE A +IT K D+YSFGV++LE+I G
Sbjct: 176 DFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAV 234
Query: 427 ---KHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ P+ L D + S SV+ ++ V CL E
Sbjct: 235 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVE----AMYSVASQCLHEKKNK 290
Query: 484 RPTMKIVSQQLR 495
RP +K V Q L+
Sbjct: 291 RPDIKKVQQLLQ 302
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG+A+ + AG Y ++APE+ ++ DV+S+GVL+ E++ G+ P
Sbjct: 159 DFGLAREWHRTTK--MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP--- 213
Query: 433 LSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492
++ +A++++ LP+PS + E +ME C P SRP+ +
Sbjct: 214 FRGIDGLAVAYGVAMNKL---ALPIPS-TCPEPFAKLME---DCWNPDPHSRPSFTNILD 266
Query: 493 QL 494
QL
Sbjct: 267 QL 268
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 14/132 (10%)
Query: 373 DFGIAKFLKPDSSN--WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG---- 426
DFG+A+ + + GT Y+APE A +IT K D+YSFGV++LE+I G
Sbjct: 176 DFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAV 234
Query: 427 ---KHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ P+ L D + S SV+ ++ V CL E
Sbjct: 235 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVE----AMYSVASQCLHEKKNK 290
Query: 484 RPTMKIVSQQLR 495
RP +K V Q L+
Sbjct: 291 RPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 14/132 (10%)
Query: 373 DFGIAKFLKPDSSN--WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG---- 426
DFG+A+ + + GT Y+APE A +IT K D+YSFGV++LE+I G
Sbjct: 170 DFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAV 228
Query: 427 ---KHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ P+ L D + S SV+ ++ V CL E
Sbjct: 229 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVE----AMYSVASQCLHEKKNK 284
Query: 484 RPTMKIVSQQLR 495
RP +K V Q L+
Sbjct: 285 RPDIKKVQQLLQ 296
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 373 DFGIAKF-LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
D+G+ K L+P + T F GT YIAPE+ D ++ GVL+ E++ G+ P D
Sbjct: 196 DYGMCKEGLRPGDTTST-FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
Query: 432 FLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESR 484
+ S+ +P NT D +L+ ++ +P S+ K S+++ S L + P+ R
Sbjct: 255 IVGSSDNPDQNTEDYLFQVILEKQIRIPR-SLSVKAASVLK---SFLNKDPKER 304
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 25/136 (18%)
Query: 366 SRNNITGDFGIAKFL--------------KPDSSNWTGFAGTYGYIAPELAYTMKITEKC 411
++N + DFG+A+ + KPD G ++APE+ EK
Sbjct: 144 NKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKV 203
Query: 412 DVYSFGVLVLEVI-KGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIM 470
DV+SFG+++ E+I + D+L T LN LD P P S
Sbjct: 204 DVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPP----------SFF 253
Query: 471 EVGFSCLKESPESRPT 486
+ C PE RP+
Sbjct: 254 PITVRCCDLDPEKRPS 269
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 373 DFGIAKF-LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
D+G+ K L+P + + F GT YIAPE+ D ++ GVL+ E++ G+ P D
Sbjct: 153 DYGMCKEGLRPGDTT-SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
Query: 432 FLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESR 484
+ S+ +P NT D +L+ ++ +P S+ K S+++ S L + P+ R
Sbjct: 212 IVGSSDNPDQNTEDYLFQVILEKQIRIPR-SLSVKAASVLK---SFLNKDPKER 261
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEV-IKGK 427
DFG+A+ + + + WT G + APE A + T K DV+SFG+L+ E+ KG+
Sbjct: 153 ADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
Query: 428 HPRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
P P + LD++ R+P P E L +M C ++ PE RPT
Sbjct: 211 VP--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKEPEERPT 258
Query: 487 MKIVS 491
+ +
Sbjct: 259 FEYLQ 263
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 373 DFGIAKF-LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
D+G+ K L+P + + F GT YIAPE+ D ++ GVL+ E++ G+ P D
Sbjct: 149 DYGMCKEGLRPGDTT-SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
Query: 432 FLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESR 484
+ S+ +P NT D +L+ ++ +P S+ K S+++ S L + P+ R
Sbjct: 208 IVGSSDNPDQNTEDYLFQVILEKQIRIPR-SLSVKAASVLK---SFLNKDPKER 257
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 373 DFGIAKF-LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
D+G+ K L+P + + F GT YIAPE+ D ++ GVL+ E++ G+ P D
Sbjct: 164 DYGMCKEGLRPGDTT-SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
Query: 432 FLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESR 484
+ S+ +P NT D +L+ ++ +P S+ K S+++ S L + P+ R
Sbjct: 223 IVGSSDNPDQNTEDYLFQVILEKQIRIPR-SMSVKAASVLK---SFLNKDPKER 272
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 14/132 (10%)
Query: 373 DFGIAKFLK--PDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG---- 426
DFG+A+ + + GT Y APE A +IT K D+YSFGV++LE+I G
Sbjct: 167 DFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAV 225
Query: 427 ---KHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ P+ L D + S SV+ + V CL E
Sbjct: 226 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVE----AXYSVASQCLHEKKNK 281
Query: 484 RPTMKIVSQQLR 495
RP +K V Q L+
Sbjct: 282 RPDIKKVQQLLQ 293
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 363 LNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLE 422
L+ +N GDFG+A+ L D+S F GT Y++PE M EK D++S G L+ E
Sbjct: 149 LDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
Query: 423 V 423
+
Sbjct: 209 L 209
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 366 SRNNITG--------DFGIAKFLKPDS-SNWTGFAGTYGYIAPELAYTMKITEKCDVYSF 416
+RN + G DFG+ +F+ D ++ TG + +PE+ + + K DV+SF
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 190
Query: 417 GVLVLEVI-KGKHPRDFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGF 474
GVL+ EV +GK P + + S+ + DI+ + PRL + ++
Sbjct: 191 GVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAS---------THVYQIMN 238
Query: 475 SCLKESPESRPTMKIVSQQLRISAPS 500
C KE PE RP + +QL A S
Sbjct: 239 HCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 363 LNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLE 422
L+ +N GDFG+A+ L D+S F GT Y++PE M EK D++S G L+ E
Sbjct: 149 LDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
Query: 423 V 423
+
Sbjct: 209 L 209
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 366 SRNNITG--------DFGIAKFLKPDS-SNWTGFAGTYGYIAPELAYTMKITEKCDVYSF 416
+RN + G DFG+ +F+ D ++ TG + +PE+ + + K DV+SF
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 188
Query: 417 GVLVLEVI-KGKHPRDFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGF 474
GVL+ EV +GK P + + S+ + DI+ + PRL + ++
Sbjct: 189 GVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAS---------THVYQIMN 236
Query: 475 SCLKESPESRPTMKIVSQQLRISAPS 500
C KE PE RP + +QL A S
Sbjct: 237 HCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 366 SRNNITG--------DFGIAKFLKPDS-SNWTGFAGTYGYIAPELAYTMKITEKCDVYSF 416
+RN + G DFG+ +F+ D ++ TG + +PE+ + + K DV+SF
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 190
Query: 417 GVLVLEVI-KGKHPRDFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGF 474
GVL+ EV +GK P + + S+ + DI+ + PRL + ++
Sbjct: 191 GVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAS---------THVYQIMN 238
Query: 475 SCLKESPESRPTMKIVSQQLRISAPS 500
C KE PE RP + +QL A S
Sbjct: 239 HCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 366 SRNNITG--------DFGIAKFLKPDS-SNWTGFAGTYGYIAPELAYTMKITEKCDVYSF 416
+RN + G DFG+ +F+ D ++ TG + +PE+ + + K DV+SF
Sbjct: 151 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 210
Query: 417 GVLVLEVI-KGKHPRDFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGF 474
GVL+ EV +GK P + + S+ + DI+ + PRL + ++
Sbjct: 211 GVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAS---------THVYQIMN 258
Query: 475 SCLKESPESRPTMKIVSQQLRISAPS 500
C KE PE RP + +QL A S
Sbjct: 259 HCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY---GYIAPELAYTMKITEKCDVYSFGVLVLEV-IKGK 427
DFG+A+ + + + +T G + APE A + T K DV+SFG+L+ E+ KG+
Sbjct: 405 ADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 462
Query: 428 HPRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
P P + LD++ R+P P E L +M C ++ PE RPT
Sbjct: 463 VP--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKEPEERPT 510
Query: 487 MKIVS 491
+ +
Sbjct: 511 FEYLQ 515
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY---GYIAPELAYTMKITEKCDVYSFGVLVLEV-IKGK 427
DFG+A+ + + + +T G + APE A + T K DV+SFG+L+ E+ KG+
Sbjct: 322 ADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
Query: 428 HPRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
P P + LD++ R+P P E L +M C ++ PE RPT
Sbjct: 380 VP--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKEPEERPT 427
Query: 487 MKIVS 491
+ +
Sbjct: 428 FEYLQ 432
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY---GYIAPELAYTMKITEKCDVYSFGVLVLEV-IKGK 427
DFG+A+ + + + +T G + APE A + T K DV+SFG+L+ E+ KG+
Sbjct: 322 ADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
Query: 428 HPRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
P P + LD++ R+P P E L +M C ++ PE RPT
Sbjct: 380 VP--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKEPEERPT 427
Query: 487 MKIVS 491
+ +
Sbjct: 428 FEYLQ 432
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY---GYIAPELAYTMKITEKCDVYSFGVLVLEV-IKGK 427
DFG+A+ + + + +T G + APE A + T K DV+SFG+L+ E+ KG+
Sbjct: 322 ADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
Query: 428 HPRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
P P + LD++ R+P P E L +M C ++ PE RPT
Sbjct: 380 VP--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKEPEERPT 427
Query: 487 MKIVS 491
+ +
Sbjct: 428 FEYLQ 432
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 15/121 (12%)
Query: 373 DFGIAKF-LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPR 430
DFG++++ L + ++ G + PE+ K + K D+++FGVL+ E+ GK P
Sbjct: 163 DFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
Query: 431 D-FLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKI 489
+ F +S ++ + + L P L EK+ +IM +SC E + RPT KI
Sbjct: 223 ERFTNSETAEHIAQGLRL---YRPHL------ASEKVYTIM---YSCWHEKADERPTFKI 270
Query: 490 V 490
+
Sbjct: 271 L 271
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 19/123 (15%)
Query: 373 DFGIAKFLKPD---SSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++++ D SS + F + PE+ K + K D+++FGVL+ E+ GK
Sbjct: 148 DFGLSRYVLDDEYTSSRGSKFPVRWS--PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 205
Query: 429 PRD-FLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P + F +S ++ + + RL P + EK+ +IM +SC E + RPT
Sbjct: 206 PYERFTNSETAEHIAQGL--------RLYRPHLA-SEKVYTIM---YSCWHEKADERPTF 253
Query: 488 KIV 490
KI+
Sbjct: 254 KIL 256
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 19/123 (15%)
Query: 373 DFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++++ D +T G+ + PE+ K + K D+++FGVL+ E+ GK
Sbjct: 148 DFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 205
Query: 429 PRD-FLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P + F +S ++ + + RL P + EK+ +IM +SC E + RPT
Sbjct: 206 PYERFTNSETAEHIAQGL--------RLYRPHLA-SEKVYTIM---YSCWHEKADERPTF 253
Query: 488 KIV 490
KI+
Sbjct: 254 KIL 256
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 366 SRNNITG--------DFGIAKFLKPDS-SNWTGFAGTYGYIAPELAYTMKITEKCDVYSF 416
+RN + G DFG+ +F+ D ++ TG + +PE+ + + K DV+SF
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 193
Query: 417 GVLVLEVI-KGKHPRDFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGF 474
GVL+ EV +GK P + + S+ + DI+ + PRL + ++
Sbjct: 194 GVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAS---------THVYQIMN 241
Query: 475 SCLKESPESRPTMKIVSQQLRISAPS 500
C +E PE RP + +QL A S
Sbjct: 242 HCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 19/123 (15%)
Query: 373 DFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++++ D +T G+ + PE+ K + K D+++FGVL+ E+ GK
Sbjct: 163 DFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 220
Query: 429 PRD-FLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P + F +S ++ + + L P L EK+ +IM +SC E + RPT
Sbjct: 221 PYERFTNSETAEHIAQGLRL---YRPHL------ASEKVYTIM---YSCWHEKADERPTF 268
Query: 488 KIV 490
KI+
Sbjct: 269 KIL 271
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 366 SRNNITG--------DFGIAKFLKPDS-SNWTGFAGTYGYIAPELAYTMKITEKCDVYSF 416
+RN + G DFG+ +F+ D ++ TG + +PE+ + + K DV+SF
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 191
Query: 417 GVLVLEVI-KGKHPRDFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGF 474
GVL+ EV +GK P + + S+ + DI+ + PRL + ++
Sbjct: 192 GVLMWEVFSEGKIPYE---NRSNSEVVEDISTGFRLYKPRLAS---------THVYQIMN 239
Query: 475 SCLKESPESRPTMKIVSQQLRISAPS 500
C +E PE RP + +QL A S
Sbjct: 240 HCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 19/123 (15%)
Query: 373 DFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++++ D +T G+ + PE+ K + K D+++FGVL+ E+ GK
Sbjct: 154 DFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 211
Query: 429 PRD-FLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P + F +S ++ + + RL P + EK+ +IM +SC E + RPT
Sbjct: 212 PYERFTNSETAEHIAQGL--------RLYRPHLA-SEKVYTIM---YSCWHEKADERPTF 259
Query: 488 KIV 490
KI+
Sbjct: 260 KIL 262
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEV-IKGK 427
DFG+A+ + + + +T G + APE A + T K DV+SFG+L+ E+ KG+
Sbjct: 153 ADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
Query: 428 HPRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
P P + LD++ R+P P E L +M C ++ PE RPT
Sbjct: 211 VP--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKEPEERPT 258
Query: 487 MKIVS 491
+ +
Sbjct: 259 FEYLQ 263
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 19/123 (15%)
Query: 373 DFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++++ D +T G+ + PE+ K + K D+++FGVL+ E+ GK
Sbjct: 147 DFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 204
Query: 429 PRD-FLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P + F +S ++ + + RL P + EK+ +IM +SC E + RPT
Sbjct: 205 PYERFTNSETAEHIAQGL--------RLYRPHLA-SEKVYTIM---YSCWHEKADERPTF 252
Query: 488 KIV 490
KI+
Sbjct: 253 KIL 255
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEV-IKG 426
DFG+A+ + + + +T G + APE A + T K DV+SFG+L+ E+ KG
Sbjct: 155 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 427 KHPRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P P + LD++ R+P P E L +M C ++ PE RP
Sbjct: 213 RVP--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERP 260
Query: 486 TMKIVS 491
T + +
Sbjct: 261 TFEYLQ 266
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 19/123 (15%)
Query: 373 DFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++++ D +T G+ + PE+ K + K D+++FGVL+ E+ GK
Sbjct: 143 DFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 200
Query: 429 PRD-FLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P + F +S ++ + + RL P + EK+ +IM +SC E + RPT
Sbjct: 201 PYERFTNSETAEHIAQGL--------RLYRPHLA-SEKVYTIM---YSCWHEKADERPTF 248
Query: 488 KIV 490
KI+
Sbjct: 249 KIL 251
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEV-IKG 426
DFG+A+ + + + +T G + APE A + T K DV+SFG+L+ E+ KG
Sbjct: 155 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 427 KHPRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P P + LD++ R+P P E L +M C ++ PE RP
Sbjct: 213 RVP--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERP 260
Query: 486 TMKIVS 491
T + +
Sbjct: 261 TFEYLQ 266
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEV-IKG 426
DFG+A+ + + + +T G + APE A + T K DV+SFG+L+ E+ KG
Sbjct: 155 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 427 KHPRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P P + LD++ R+P P E L +M C ++ PE RP
Sbjct: 213 RVP--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERP 260
Query: 486 TMKIVS 491
T + +
Sbjct: 261 TFEYLQ 266
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEV-IKG 426
DFG+A+ + + + +T G + APE A + T K DV+SFG+L+ E+ KG
Sbjct: 155 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 427 KHPRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P P + LD++ R+P P E L +M C ++ PE RP
Sbjct: 213 RVP--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERP 260
Query: 486 TMKIVS 491
T + +
Sbjct: 261 TFEYLQ 266
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEV-IKG 426
DFG+A+ + + + +T G + APE A + T K DV+SFG+L+ E+ KG
Sbjct: 148 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 205
Query: 427 KHPRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P P + LD++ R+P P E L +M C ++ PE RP
Sbjct: 206 RVP--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKEPEERP 253
Query: 486 TMKIVS 491
T + +
Sbjct: 254 TFEYLQ 259
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEV-IKG 426
DFG+A+ + + + +T G + APE A + T K DV+SFG+L+ E+ KG
Sbjct: 155 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 427 KHPRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P P + LD++ R+P P E L +M C ++ PE RP
Sbjct: 213 RVP--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERP 260
Query: 486 TMKIVS 491
T + +
Sbjct: 261 TFEYLQ 266
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEV-IKG 426
DFG+A+ + + + +T G + APE A + T K DV+SFG+L+ E+ KG
Sbjct: 155 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 427 KHPRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P P + LD++ R+P P E L +M C ++ PE RP
Sbjct: 213 RVP--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERP 260
Query: 486 TMKIVS 491
T + +
Sbjct: 261 TFEYLQ 266
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEV-IKG 426
DFG+A+ + + + +T G + APE A + T K DV+SFG+L+ E+ KG
Sbjct: 155 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 427 KHPRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P P + LD++ R+P P E L +M C ++ PE RP
Sbjct: 213 RVP--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERP 260
Query: 486 TMKIVS 491
T + +
Sbjct: 261 TFEYLQ 266
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 24/131 (18%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG A ++ ++ T G+ ++APE+ +EKCDV+S+G+++ EVI + P D
Sbjct: 150 DFGTACDIQ---THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD- 205
Query: 433 LSSTSSPSLNTDIALDEMLDP----RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM- 487
P+ A+ P LP P S+ + C + P RP+M
Sbjct: 206 --EIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTR----------CWSKDPSQRPSME 253
Query: 488 ---KIVSQQLR 495
KI++ +R
Sbjct: 254 EIVKIMTHLMR 264
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEV-IKG 426
DFG+A+ + + + +T G + APE A + T K DV+SFG+L+ E+ KG
Sbjct: 146 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 203
Query: 427 KHPRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P P + LD++ R+P P E L +M C ++ PE RP
Sbjct: 204 RVP--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERP 251
Query: 486 TMKIVS 491
T + +
Sbjct: 252 TFEYLQ 257
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 24/131 (18%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG A ++ ++ T G+ ++APE+ +EKCDV+S+G+++ EVI + P D
Sbjct: 149 DFGTACDIQ---THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD- 204
Query: 433 LSSTSSPSLNTDIALDEMLDP----RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM- 487
P+ A+ P LP P S+ + C + P RP+M
Sbjct: 205 --EIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTR----------CWSKDPSQRPSME 252
Query: 488 ---KIVSQQLR 495
KI++ +R
Sbjct: 253 EIVKIMTHLMR 263
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEV-IKG 426
DFG+A+ + + + +T G + APE A + T K DV+SFG+L+ E+ KG
Sbjct: 144 VADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 201
Query: 427 KHPRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P P + LD++ R+P P E L +M C ++ PE RP
Sbjct: 202 RVP--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERP 249
Query: 486 TMKIVS 491
T + +
Sbjct: 250 TFEYLQ 255
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 363 LNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLE 422
L+ +N GDFG+A+ L D F GT Y++PE M EK D++S G L+ E
Sbjct: 149 LDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
Query: 423 V 423
+
Sbjct: 209 L 209
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 17/127 (13%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY---GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GK 427
DFG+A+ + + + +T G + APE T K DV+SFG+L++E++ G+
Sbjct: 326 ADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P +S N ++ R+P P + E+L +IM C K PE RPT
Sbjct: 384 IPYPGMS-------NPEVIRALERGYRMPRPE-NCPEELYNIM---MRCWKNRPEERPTF 432
Query: 488 KIVSQQL 494
+ + L
Sbjct: 433 EYIQSVL 439
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 17/127 (13%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GK 427
DFG+A+ + + + +T G + APE T K DV+SFG+L++E++ G+
Sbjct: 153 ADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P +S N ++ R+P P + E+L +IM C K PE RPT
Sbjct: 211 IPYPGMS-------NPEVIRALERGYRMPRPE-NCPEELYNIM---MRCWKNRPEERPTF 259
Query: 488 KIVSQQL 494
+ + L
Sbjct: 260 EYIQSVL 266
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 17/119 (14%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYI-----APELAYTMKITEKCDVYSFGVLVLEVIK-G 426
DFG+++FL+ D+S+ T + G I APE K T DV+S+G+++ EV+ G
Sbjct: 152 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 211
Query: 427 KHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P + T+ +N I D L P + PS ++ ++ C ++ RP
Sbjct: 212 ERP--YWDMTNQDVINA-IEQDYRLPPPMDCPS--------ALHQLMLDCWQKDRNHRP 259
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 372 GDFGIAKFLKP-DSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEV-IKGKHP 429
DFG+A+ ++ + + G + APE A + T K DV+SFG+L+ E+ KG+ P
Sbjct: 146 ADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 205
Query: 430 RDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P + LD++ R+P P E L +M C ++ PE RPT +
Sbjct: 206 --------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKEPEERPTFE 253
Query: 489 IVS 491
+
Sbjct: 254 YLQ 256
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 371 TGDFGIAKFLKP-DSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEV-IKGKH 428
DFG+A+ ++ + + G + APE A + T K DV+SFG+L+ E+ KG+
Sbjct: 155 VADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
Query: 429 PRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P P + LD++ R+P P E L +M C ++ PE RPT
Sbjct: 215 P--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERPTF 262
Query: 488 KIVS 491
+ +
Sbjct: 263 EYLQ 266
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMK---ITEKCDVYSFGVLVLEVIKGKHP 429
DF IA L P + T AGT Y+APE+ + K + D +S GV E+++G+ P
Sbjct: 158 DFNIAAML-PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
Query: 430 RDFLSSTSSPSL 441
SSTSS +
Sbjct: 217 YHIRSSTSSKEI 228
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY---GYIAPELAYTMKITEKCDVYSFGVLVLEV-IKGK 427
DFG+ + + + + +T G + APE A + T K DV+SFG+L+ E+ KG+
Sbjct: 323 ADFGLGRLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 380
Query: 428 HPRDFLSSTSSPSLNTDIALDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
P P + LD++ R+P P E L +M C ++ PE RPT
Sbjct: 381 VP--------YPGMVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERPT 428
Query: 487 MKIVS 491
+ +
Sbjct: 429 FEYLQ 433
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 17/119 (14%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYI-----APELAYTMKITEKCDVYSFGVLVLEVIK-G 426
DFG+++FL+ D+S+ T + G I APE K T DV+S+G+++ EV+ G
Sbjct: 178 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 237
Query: 427 KHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P + T+ +N I D L P + PS ++ ++ C ++ RP
Sbjct: 238 ERP--YWDMTNQDVINA-IEQDYRLPPPMDCPS--------ALHQLMLDCWQKDRNHRP 285
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 13/116 (11%)
Query: 373 DFGIAKFLKPDSSNWTGFA---GTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFGIA+ + ++ T A GT Y++PE A + + DVYS G ++ EV+ G+ P
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIME-VGFSCLKESPESR 484
F + + D P+P + E L + ++ V L ++PE+R
Sbjct: 219 --FTGDSPDSVAYQHVRED-------PIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG+A+ K D + T AGT Y+APE+ + +T KCD++S GV++ ++ G P
Sbjct: 170 DFGLAELFKSDEHS-TNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTGCLP--- 224
Query: 433 LSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
+ TS + E P V + + + +++ L + PE RP+
Sbjct: 225 FTGTSLEEVQQKATYKE---PNYAVECRPLTPQAVDLLK---QMLTKDPERRPS 272
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 16/126 (12%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+A+ L+ D + G ++A E + K T + DV+S+GV + E++ G P
Sbjct: 160 DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + + P L RLP P C+ I + V C +SRP K
Sbjct: 220 YDGIPTREIPDLLEK-------GERLPQPPICT-----IDVYMVMVKCWMIDADSRPKFK 267
Query: 489 IVSQQL 494
++ +
Sbjct: 268 ELAAEF 273
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG+A ++ D W GFAGT GY++PE+ + D+++ GV++ ++ G P
Sbjct: 148 ADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 15/128 (11%)
Query: 339 IDLSRNNFYGE---ISSNFGECPKLGALNISRNNI---------TGDFGIAKFLKPDSSN 386
DLSR FY + F + ++ +NI DFG+ K +
Sbjct: 115 FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK 174
Query: 387 WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIA 446
F GT YIAPE+ K D +SFGVL+ E++ G+ P L I
Sbjct: 175 TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP---FHGQDEEELFHSIR 231
Query: 447 LDEMLDPR 454
+D PR
Sbjct: 232 MDNPFYPR 239
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 15/128 (11%)
Query: 339 IDLSRNNFYGE---ISSNFGECPKLGALNISRNNI---------TGDFGIAKFLKPDSSN 386
DLSR FY + F + ++ +NI DFG+ K +
Sbjct: 116 FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK 175
Query: 387 WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIA 446
F GT YIAPE+ K D +SFGVL+ E++ G+ P L I
Sbjct: 176 TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP---FHGQDEEELFHSIR 232
Query: 447 LDEMLDPR 454
+D PR
Sbjct: 233 MDNPFYPR 240
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG + P+ S + GT ++APE+ K D++S G++ +E+I+G+ P
Sbjct: 159 DFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG + P+ S + GT ++APE+ K D++S G++ +E+I+G+ P
Sbjct: 159 DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG + P+ S + GT ++APE+ K D++S G++ +E+I+G+ P
Sbjct: 159 DFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG + P+ S + GT ++APE+ K D++S G++ +E+I+G+ P
Sbjct: 160 DFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG + P+ S + GT ++APE+ K D++S G++ +E+I+G+ P
Sbjct: 160 DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 16/126 (12%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+A+ L+ D + G ++A E + K T + DV+S+GV + E++ G P
Sbjct: 183 DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + + P L RLP P C+ I + V C +SRP K
Sbjct: 243 YDGIPTREIPDLLEK-------GERLPQPPICT-----IDVYMVMVKCWMIDADSRPKFK 290
Query: 489 IVSQQL 494
++ +
Sbjct: 291 ELAAEF 296
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 13/116 (11%)
Query: 373 DFGIAKFLKPDSSNWTGFA---GTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFGIA+ + ++ T A GT Y++PE A + + DVYS G ++ EV+ G+ P
Sbjct: 176 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIME-VGFSCLKESPESR 484
F + + D P+P + E L + ++ V L ++PE+R
Sbjct: 236 --FTGDSPVSVAYQHVRED-------PIPPSARHEGLSADLDAVVLKALAKNPENR 282
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 13/116 (11%)
Query: 373 DFGIAKFLKPDSSNWTGFA---GTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFGIA+ + ++ T A GT Y++PE A + + DVYS G ++ EV+ G+ P
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIME-VGFSCLKESPESR 484
F + + D P+P + E L + ++ V L ++PE+R
Sbjct: 219 --FTGDSPVSVAYQHVRED-------PIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 13/116 (11%)
Query: 373 DFGIAKFLKPDSSNWTGFA---GTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFGIA+ + ++ T A GT Y++PE A + + DVYS G ++ EV+ G+ P
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIME-VGFSCLKESPESR 484
F + + D P+P + E L + ++ V L ++PE+R
Sbjct: 219 --FTGDSPVSVAYQHVRED-------PIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 13/116 (11%)
Query: 373 DFGIAKFLKPDSSNWTGFA---GTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFGIA+ + ++ T A GT Y++PE A + + DVYS G ++ EV+ G+ P
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIME-VGFSCLKESPESR 484
F + + D P+P + E L + ++ V L ++PE+R
Sbjct: 219 --FTGDSPVSVAYQHVRED-------PIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 373 DFGIAKFLKPDSSN----WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH 428
DFGIA+ + DS N GT Y++PE A + + DVYS G ++ EV+ G+
Sbjct: 159 DFGIARAIA-DSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIME-VGFSCLKESPESR 484
P F + + D P+P + E L + ++ V L ++PE+R
Sbjct: 218 P--FTGDSPVSVAYQHVRED-------PIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 21/124 (16%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPR 430
DFG+A+ WT APE T K DV+SFG+L++E++ G+ P
Sbjct: 320 ADFGLARVGAKFPIKWT---------APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 370
Query: 431 DFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIV 490
+S N ++ R+P P + E+L +IM C K PE RPT + +
Sbjct: 371 PGMS-------NPEVIRALERGYRMPRPE-NCPEELYNIM---MRCWKNRPEERPTFEYI 419
Query: 491 SQQL 494
L
Sbjct: 420 QSVL 423
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
D G AK L T F GT Y+APEL K T D +SFG L E I G P
Sbjct: 168 DLGYAKELD-QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
D G AK L T F GT Y+APEL K T D +SFG L E I G P
Sbjct: 167 DLGYAKELD-QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG+A ++ D W GFAGT GY++PE+ + D+++ GV++ ++ G P
Sbjct: 148 ADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG+A ++ D W GFAGT GY++PE+ + D+++ GV++ ++ G P
Sbjct: 148 ADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK++ PD + GT YIAPE+ T + D +SFG+L+ E++ G P
Sbjct: 149 DFGFAKYV-PDVT--YXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 69/165 (41%), Gaps = 20/165 (12%)
Query: 340 DLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKPDSS----NWTGFAGTYG 395
DL N SS F + GA N+ + DFG+ K L N +GT G
Sbjct: 158 DLKPQNILVSTSSRFTADQQTGAENL--RILISDFGLCKKLDSGQXXFRXNLNNPSGTSG 215
Query: 396 YIAPEL---AYTMKITEKCDVYSFGVLVLEVI-KGKHPRDFLSSTSSPSLNTDIALDEML 451
+ APEL + ++T D++S G + ++ KGKHP S S + +LDEM
Sbjct: 216 WRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEM- 274
Query: 452 DPRLPVPSCSVQEKLIS-IMEVGFSCLKESPESRPT-MKIVSQQL 494
C LI+ ++ + P RPT MK++ L
Sbjct: 275 -------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 312
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 69/165 (41%), Gaps = 20/165 (12%)
Query: 340 DLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKPDSS----NWTGFAGTYG 395
DL N SS F + GA N+ + DFG+ K L N +GT G
Sbjct: 158 DLKPQNILVSTSSRFTADQQTGAENL--RILISDFGLCKKLDSGQXXFRXNLNNPSGTSG 215
Query: 396 YIAPEL---AYTMKITEKCDVYSFGVLVLEVI-KGKHPRDFLSSTSSPSLNTDIALDEML 451
+ APEL + ++T D++S G + ++ KGKHP S S + +LDEM
Sbjct: 216 WRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEM- 274
Query: 452 DPRLPVPSCSVQEKLIS-IMEVGFSCLKESPESRPT-MKIVSQQL 494
C LI+ ++ + P RPT MK++ L
Sbjct: 275 -------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 312
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH 428
DFG+A+ + + + +T G + APE T K DV+SFG+L+ E++ H
Sbjct: 147 ADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV--TH 202
Query: 429 PRDFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
R ++P + ++ M+ P +C E+L +M + C KE PE RPT
Sbjct: 203 GRIPYPGMTNPEVIQNLERGYRMVRP----DNCP--EELYQLMRL---CWKERPEDRPT 252
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH 428
DFG+A+ + + + +T G + APE T K DV+SFG+L+ E++ H
Sbjct: 161 ADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV--TH 216
Query: 429 PRDFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
R ++P + ++ M+ P +C E+L +M + C KE PE RPT
Sbjct: 217 GRIPYPGMTNPEVIQNLERGYRMVRP----DNCP--EELYQLMRL---CWKERPEDRPT 266
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 69/169 (40%), Gaps = 24/169 (14%)
Query: 340 DLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKPDSS----NWTGFAGTYG 395
DL N SS F + GA N+ + DFG+ K L S N +GT G
Sbjct: 140 DLKPQNILVSTSSRFTADQQTGAENL--RILISDFGLCKKLDSGQSSFRTNLNNPSGTSG 197
Query: 396 YIAPEL-------AYTMKITEKCDVYSFGVLVLEVI-KGKHPRDFLSSTSSPSLNTDIAL 447
+ APEL ++T D++S G + ++ KGKHP S S + +L
Sbjct: 198 WRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL 257
Query: 448 DEMLDPRLPVPSCSVQEKLIS-IMEVGFSCLKESPESRPT-MKIVSQQL 494
DEM C LI+ ++ + P RPT MK++ L
Sbjct: 258 DEM--------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 298
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH 428
DFG+A+ + + + +T G + APE T K DV+SFG+L+ E++ H
Sbjct: 157 ADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV--TH 212
Query: 429 PRDFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
R ++P + ++ M+ P +C E+L +M + C KE PE RPT
Sbjct: 213 GRIPYPGMTNPEVIQNLERGYRMVRP----DNCP--EELYQLMRL---CWKERPEDRPT 262
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH 428
DFG+A+ + + + +T G + APE T K DV+SFG+L+ E++ H
Sbjct: 146 ADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV--TH 201
Query: 429 PRDFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
R ++P + ++ M+ P +C E+L +M + C KE PE RPT
Sbjct: 202 GRIPYPGMTNPEVIQNLERGYRMVRP----DNCP--EELYQLMRL---CWKERPEDRPT 251
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH 428
DFG+A+ + + + +T G + APE T K DV+SFG+L+ E++ H
Sbjct: 156 ADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV--TH 211
Query: 429 PRDFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
R ++P + ++ M+ P +C E+L +M + C KE PE RPT
Sbjct: 212 GRIPYPGMTNPEVIQNLERGYRMVRP----DNCP--EELYQLMRL---CWKERPEDRPT 261
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH 428
DFG+A+ + + + +T G + APE T K DV+SFG+L+ E++ H
Sbjct: 151 ADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV--TH 206
Query: 429 PRDFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
R ++P + ++ M+ P +C E+L +M + C KE PE RPT
Sbjct: 207 GRIPYPGMTNPEVIQNLERGYRMVRP----DNCP--EELYQLMRL---CWKERPEDRPT 256
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG+A + DS W GFAGT GY++PE+ ++ D+++ GV++ ++ G P
Sbjct: 173 ADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG+A ++ + W GFAGT GY++PE+ + D+++ GV++ ++ G P
Sbjct: 175 ADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 372 GDFGIAKFLK-PDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPR 430
DFG+A+ ++ + + G + APE T K DV+SFG+L+ E++ H R
Sbjct: 151 ADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV--THGR 208
Query: 431 DFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
++P + ++ M+ P +C E+L +M + C KE PE RPT
Sbjct: 209 IPYPGMTNPEVIQNLERGYRMVRP----DNCP--EELYQLMRL---CWKERPEDRPT 256
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 26/130 (20%)
Query: 372 GDFGIAKFLKP-----DSSNWTGFAGTYGYIAPELAYTMKITE-KCDVYSFGVLVLEVIK 425
DFG++ FL + F GT ++APE+ ++ + K D++SFG+ +E+
Sbjct: 158 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT 217
Query: 426 GKHPRD---------FLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSC 476
G P PSL T + EML K+IS+ C
Sbjct: 218 GAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLK-----KYGKSFRKMISL------C 266
Query: 477 LKESPESRPT 486
L++ PE RPT
Sbjct: 267 LQKDPEKRPT 276
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 373 DFGIAKFLKPDSSNWTGFA-GTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFGIAK L S T GT Y +PE A E D+YS G+++ E++ G+ P +
Sbjct: 154 DFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
Query: 432 FLSST---------SSPSLNTDIALD 448
++ S P++ TD+ D
Sbjct: 214 GETAVSIAIKHIQDSVPNVTTDVRKD 239
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG+A + DS W GFAGT GY++PE+ ++ D+++ GV++ ++ G P
Sbjct: 150 ADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 26/130 (20%)
Query: 372 GDFGIAKFLKP-----DSSNWTGFAGTYGYIAPELAYTMKITE-KCDVYSFGVLVLEVIK 425
DFG++ FL + F GT ++APE+ ++ + K D++SFG+ +E+
Sbjct: 163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT 222
Query: 426 GKHPRD---------FLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSC 476
G P PSL T + EML K+IS+ C
Sbjct: 223 GAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLK-----KYGKSFRKMISL------C 271
Query: 477 LKESPESRPT 486
L++ PE RPT
Sbjct: 272 LQKDPEKRPT 281
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 25/164 (15%)
Query: 334 PNLTFIDL-SRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAG 392
P + DL S N F + N C K+ ++S+ ++ + +G G
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSV--------------HSVSGLLG 188
Query: 393 TYGYIAPEL--AYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEM 450
+ ++APE A TEK D YSF +++ ++ G+ P D S +N + +E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN--MIREEG 246
Query: 451 LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQL 494
L P +P C +L +++E+ C P+ RP + ++L
Sbjct: 247 LRPTIP-EDCP--PRLRNVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 372 GDFGIAKFLKP-DSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPR 430
DFG+A+ ++ + + G + APE T K DV+SFG+L+ E++ H R
Sbjct: 152 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV--THGR 209
Query: 431 DFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
++P + ++ M+ P +C E+L +M + C KE PE RPT
Sbjct: 210 IPYPGMTNPEVIQNLERGYRMVRP----DNCP--EELYQLMRL---CWKERPEDRPT 257
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 372 GDFGIAKFLKP-DSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPR 430
DFG+A+ ++ + + G + APE T K DV+SFG+L+ E++ H R
Sbjct: 159 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV--THGR 216
Query: 431 DFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
++P + ++ M+ P +C E+L +M + C KE PE RPT
Sbjct: 217 IPYPGMTNPEVIQNLERGYRMVRP----DNCP--EELYQLMRL---CWKERPEDRPT 264
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG+A + DS W GFAGT GY++PE+ ++ D+++ GV++ ++ G P
Sbjct: 150 ADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 372 GDFGIAKFLKP-DSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPR 430
DFG+A+ ++ + + G + APE T K DV+SFG+L+ E++ H R
Sbjct: 151 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV--THGR 208
Query: 431 DFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
++P + ++ M+ P +C E+L +M + C KE PE RPT
Sbjct: 209 IPYPGMTNPEVIQNLERGYRMVRP----DNCP--EELYQLMRL---CWKERPEDRPT 256
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 372 GDFGIAKFLKP-DSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPR 430
DFG+A+ ++ + + G + APE T K DV+SFG+L+ E++ H R
Sbjct: 157 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV--THGR 214
Query: 431 DFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
++P + ++ M+ P +C E+L +M + C KE PE RPT
Sbjct: 215 IPYPGMTNPEVIQNLERGYRMVRP----DNCP--EELYQLMRL---CWKERPEDRPT 262
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 372 GDFGIAKFLKP-DSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPR 430
DFG+A+ ++ + + G + APE T K DV+SFG+L+ E++ H R
Sbjct: 160 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV--THGR 217
Query: 431 DFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
++P + ++ M+ P +C E+L +M + C KE PE RPT
Sbjct: 218 IPYPGMTNPEVIQNLERGYRMVRPD----NCP--EELYQLMRL---CWKERPEDRPT 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG+A + DS W GFAGT GY++PE+ ++ D+++ GV++ ++ G P
Sbjct: 149 ADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 372 GDFGIAKFLKP-DSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPR 430
DFG+A+ ++ + + G + APE T K DV+SFG+L+ E++ H R
Sbjct: 153 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV--THGR 210
Query: 431 DFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
++P + ++ M+ P +C E+L +M + C KE PE RPT
Sbjct: 211 IPYPGMTNPEVIQNLERGYRMVRP----DNCP--EELYQLMRL---CWKERPEDRPT 258
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 372 GDFGIAKFLKP-DSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPR 430
DFG+A+ ++ + + G + APE T K DV+SFG+L+ E++ H R
Sbjct: 151 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV--THGR 208
Query: 431 DFLSSTSSPSLNTDIALD-EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
++P + ++ M+ P +C E+L +M + C KE PE RPT
Sbjct: 209 IPYPGMTNPEVIQNLERGYRMVRP----DNCP--EELYQLMRL---CWKERPEDRPT 256
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 25/164 (15%)
Query: 334 PNLTFIDL-SRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAG 392
P + DL S N F + N C K+ +S+ ++ + +G G
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV--------------HSVSGLLG 188
Query: 393 TYGYIAPEL--AYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEM 450
+ ++APE A TEK D YSF +++ ++ G+ P D S +N + +E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN--MIREEG 246
Query: 451 LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQL 494
L P +P C +L +++E+ C P+ RP + ++L
Sbjct: 247 LRPTIP-EDCP--PRLRNVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG+++ + AGT ++APE+ EK DVYSFGV++ E+ + P
Sbjct: 182 DFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN 241
Query: 433 LSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492
L+ +A RL +P ++ ++ +I+E C P RP+ +
Sbjct: 242 LNPAQV------VAAVGFKCKRLEIPR-NLNPQVAAIIE---GCWTNEPWKRPSFATIMD 291
Query: 493 QLR 495
LR
Sbjct: 292 LLR 294
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++K F GT Y+APE+ T+ D +SFGVL+ E++ G P
Sbjct: 170 DFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++K F GT Y+APE+ T+ D +SFGVL+ E++ G P
Sbjct: 169 DFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG+A ++ + W GFAGT GY++PE+ + D+++ GV++ ++ G P
Sbjct: 155 ADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYI-----APELAYTMKITEKCDVYSFGVLVLEVIK-G 426
DFG+++FL+ +SS+ T + G I APE K T D +S+G+++ EV+ G
Sbjct: 161 DFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG 220
Query: 427 KHPRDFLSSTSSPSLNTDIALDEMLDPRL-PVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P +S N D+ D RL P P C S+ ++ C ++ +RP
Sbjct: 221 ERPYWDMS-------NQDVINAIEQDYRLPPPPDCPT-----SLHQLMLDCWQKDRNARP 268
Query: 486 TMKIVSQQL 494
V L
Sbjct: 269 RFPQVVSAL 277
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG+A ++ + W GFAGT GY++PE+ + D+++ GV++ ++ G P
Sbjct: 166 ADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++K F GT Y+APE+ T+ D +SFGVL+ E++ G P
Sbjct: 169 DFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+ K D F GT YIAPE+ + D +++GVL+ E++ G+ P D
Sbjct: 162 ADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 15/119 (12%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A L F GT ++APE+ K D++S G+ +E+ KG+ P
Sbjct: 162 ADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP-- 219
Query: 432 FLSSTSSPSLNTDIALDEM--LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
N+D+ + L P+ P+ V + S E +CL + P RPT K
Sbjct: 220 ----------NSDMHPMRVLFLIPKNNPPTL-VGDFTKSFKEFIDACLNKDPSFRPTAK 267
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAK--FLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S N+ DFG+A+ + PD ++APE + T + DV
Sbjct: 170 LAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 229
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+SFGVL+ E+ L ++ P + D L R+ P + E ++++
Sbjct: 230 WSFGVLLWEIFS-------LGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLD 282
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C P RPT + + L
Sbjct: 283 ----CWHGEPSQRPTFSELVEHL 301
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 68/169 (40%), Gaps = 24/169 (14%)
Query: 340 DLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKPDSS----NWTGFAGTYG 395
DL N SS F + GA N+ + DFG+ K L N +GT G
Sbjct: 140 DLKPQNILVSTSSRFTADQQTGAENL--RILISDFGLCKKLDSGQXXFRXNLNNPSGTSG 197
Query: 396 YIAPEL-------AYTMKITEKCDVYSFGVLVLEVI-KGKHPRDFLSSTSSPSLNTDIAL 447
+ APEL ++T D++S G + ++ KGKHP S S + +L
Sbjct: 198 WRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL 257
Query: 448 DEMLDPRLPVPSCSVQEKLIS-IMEVGFSCLKESPESRPT-MKIVSQQL 494
DEM C LI+ ++ + P RPT MK++ L
Sbjct: 258 DEM--------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 298
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
D G+A LK + G+AGT G++APEL + D ++ GV + E+I + P
Sbjct: 332 DLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 334 PNLTFIDL-SRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAG 392
P + DL S N F + N C K+ S+ ++ + +G G
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSV--------------HSVSGLLG 188
Query: 393 TYGYIAPEL--AYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEM 450
+ ++APE A TEK D YSF +++ ++ G+ P D S +N + +E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN--MIREEG 246
Query: 451 LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQL 494
L P +P C +L +++E+ C P+ RP + ++L
Sbjct: 247 LRPTIP-EDCP--PRLRNVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
D G+A LK + G+AGT G++APEL + D ++ GV + E+I + P
Sbjct: 332 DLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
D G+A LK + G+AGT G++APEL + D ++ GV + E+I + P
Sbjct: 332 DLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYG-----YIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426
DFG++K L+ D + + A T+G + APE K + K DV+SFGVL+ E G
Sbjct: 154 DFGLSKALRADENXYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 211
Query: 427 KHP-RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P R S + L R+ P+ +E + +M + C E+RP
Sbjct: 212 QKPYRGMKGSEVTAMLEK--------GERMGCPAGCPRE-MYDLMNL---CWTYDVENRP 259
Query: 486 TMKIVSQQLR 495
V +LR
Sbjct: 260 GFAAVELRLR 269
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYG-----YIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426
DFG++K L+ D + + A T+G + APE K + K DV+SFGVL+ E G
Sbjct: 148 DFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 205
Query: 427 KHP-RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P R S + L R+ P+ +E + +M + C E+RP
Sbjct: 206 QKPYRGMKGSEVTAMLEK--------GERMGCPAGCPRE-MYDLMNL---CWTYDVENRP 253
Query: 486 TMKIVSQQLR 495
V +LR
Sbjct: 254 GFAAVELRLR 263
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
D G+A LK + G+AGT G++APEL + D ++ GV + E+I + P
Sbjct: 332 DLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+A+ L D + + G ++A E + T + DV+S+GV V E++ G P
Sbjct: 162 DFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKP 221
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + + P L RLP P C++ +I + C E RP +
Sbjct: 222 YDGIPAREIPDLLEK-------GERLPQPPICTIDVYMIMV-----KCWMIDSECRPRFR 269
Query: 489 -IVSQQLRIS 497
+VS+ R++
Sbjct: 270 ELVSEFSRMA 279
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 23/128 (17%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY---GYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 399 ADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA--- 452
Query: 428 HPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPESR 484
+ SP D++ + E+L D R+ P EK+ +M +C + +P R
Sbjct: 453 ------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSDR 502
Query: 485 PTMKIVSQ 492
P+ + Q
Sbjct: 503 PSFAEIHQ 510
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYG-----YIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426
DFG++K L+ D + + A T+G + APE K + K DV+SFGVL+ E G
Sbjct: 150 DFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 207
Query: 427 KHP-RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P R S + L R+ P+ +E + +M + C E+RP
Sbjct: 208 QKPYRGMKGSEVTAMLEK--------GERMGCPAGCPRE-MYDLMNL---CWTYDVENRP 255
Query: 486 TMKIVSQQLR 495
V +LR
Sbjct: 256 GFAAVELRLR 265
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 23/128 (17%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY---GYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 357 ADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA--- 410
Query: 428 HPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPESR 484
+ SP D++ + E+L D R+ P EK+ +M +C + +P R
Sbjct: 411 ------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSDR 460
Query: 485 PTMKIVSQ 492
P+ + Q
Sbjct: 461 PSFAEIHQ 468
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYG-----YIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426
DFG++K L+ D + + A T+G + APE K + K DV+SFGVL+ E G
Sbjct: 154 DFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 211
Query: 427 KHP-RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P R S + L R+ P+ +E + +M + C E+RP
Sbjct: 212 QKPYRGMKGSEVTAMLEK--------GERMGCPAGCPRE-MYDLMNL---CWTYDVENRP 259
Query: 486 TMKIVSQQLR 495
V +LR
Sbjct: 260 GFAAVELRLR 269
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYG-----YIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426
DFG+++FL+ +SS+ T + G + APE K T D +S+G+++ EV+ G
Sbjct: 159 DFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG 218
Query: 427 KHPRDFLSSTSSPSLNTDIALDEMLDPRL-PVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P +S N D+ D RL P P C S+ ++ C ++ +RP
Sbjct: 219 ERPYWDMS-------NQDVINAIEQDYRLPPPPDCPT-----SLHQLMLDCWQKDRNARP 266
Query: 486 TMKIVSQQL 494
V L
Sbjct: 267 RFPQVVSAL 275
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 28/196 (14%)
Query: 142 MSHLKILYIDSNQLDGSIPLEVGQ---LSSMVELALFSNNLNGSVPHSLGNLTQISMLFL 198
+ HL+IL + N + +E+G L+++ L LF N L + L+++ L+L
Sbjct: 87 LRHLEILQLSRNHIRT---IEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143
Query: 199 HDNSFSGF-------IPP----DIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLV 247
+N IP D+G LK +S +S F G L+NL+ +L
Sbjct: 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEG--AFEG--------LSNLRYLNLA 193
Query: 248 YNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLR 307
NL IP + L +L L NH ++ P + LQ + +++ Q +
Sbjct: 194 MCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFD 252
Query: 308 NCTSLIRVRLDGNNLT 323
N SL+ + L NNLT
Sbjct: 253 NLQSLVEINLAHNNLT 268
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYG-----YIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426
DFG++K L+ D + + A T+G + APE K + K DV+SFGVL+ E G
Sbjct: 512 DFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 569
Query: 427 KHPRDFLSSTSSPSLNTDIALDEMLD--PRLPVPSCSVQEKLISIMEVGFSCLKESPESR 484
+ P + + + ML+ R+ P+ +E + +M + C E+R
Sbjct: 570 QKPYRGMKGSE---------VTAMLEKGERMGCPAGCPRE-MYDLMNL---CWTYDVENR 616
Query: 485 PTMKIVSQQLR 495
P V +LR
Sbjct: 617 PGFAAVELRLR 627
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYG-----YIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426
DFG++K L+ D + + A T+G + APE K + K DV+SFGVL+ E G
Sbjct: 513 DFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 570
Query: 427 KHPRDFLSSTSSPSLNTDIALDEMLD--PRLPVPSCSVQEKLISIMEVGFSCLKESPESR 484
+ P + + + ML+ R+ P+ +E + +M + C E+R
Sbjct: 571 QKPYRGMKGSE---------VTAMLEKGERMGCPAGCPRE-MYDLMNL---CWTYDVENR 617
Query: 485 PTMKIVSQQLR 495
P V +LR
Sbjct: 618 PGFAAVELRLR 628
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT----YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426
GDFG+++ + S+++ G ++ PE K T + DV+SFGV++ E+ G
Sbjct: 200 GDFGMSRDIY--STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYG 257
Query: 427 KHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
K P LS+T +++ E+ PR P ++ +IM C + P+ R +
Sbjct: 258 KQPWYQLSNTE--AIDCITQGRELERPRACPP------EVYAIMR---GCWQREPQQRHS 306
Query: 487 MKIVSQQLRISAPS 500
+K V +L+ A +
Sbjct: 307 IKDVHARLQALAQA 320
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 144 AGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 204 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGAR---DLISRL------LKHNPSQRPML 251
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 252 REVLEHPWITANS 264
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 149 AGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 209 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGA---RDLISRL------LKHNPSQRPML 256
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 257 REVLEHPWITANS 269
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG+ K D F GT YIAPE+ + D ++FGVL+ E++ G+ P
Sbjct: 484 ADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 10/123 (8%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG+++ AGT ++APE+ EK DVYSFGV++ E+ + P
Sbjct: 182 DFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN 241
Query: 433 LSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492
L+ +A RL +P ++ ++ +I+E C P RP+ +
Sbjct: 242 LNPAQV------VAAVGFKCKRLEIPR-NLNPQVAAIIE---GCWTNEPWKRPSFATIMD 291
Query: 493 QLR 495
LR
Sbjct: 292 LLR 294
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 144 AGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 204 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGAR---DLISRL------LKHNPSQRPML 251
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 252 REVLEHPWITANS 264
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT----YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426
GDFG+++ + S+++ G ++ PE K T + DV+SFGV++ E+ G
Sbjct: 171 GDFGMSRDIY--STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYG 228
Query: 427 KHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
K P LS+T +++ E+ PR P ++ +IM C + P+ R +
Sbjct: 229 KQPWYQLSNTE--AIDCITQGRELERPRACPP------EVYAIMR---GCWQREPQQRHS 277
Query: 487 MKIVSQQLRISAPS 500
+K V +L+ A +
Sbjct: 278 IKDVHARLQALAQA 291
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 37/74 (50%), Gaps = 15/74 (20%)
Query: 366 SRNNITGDFGIAK-------FLKPDSSNWTGFA-------GTYGYIAPE-LAYTMKITEK 410
SRN GDFG+AK LK DS N G + GT Y+A E L T EK
Sbjct: 152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEK 211
Query: 411 CDVYSFGVLVLEVI 424
D+YS G++ E+I
Sbjct: 212 IDMYSLGIIFFEMI 225
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 145 AGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 205 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGA---RDLISRL------LKHNPSQRPML 252
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 253 REVLEHPWITANS 265
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYG-----YIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426
DFG++K L+ D + + A T+G + APE K + K DV+SFGVL+ E G
Sbjct: 160 DFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 217
Query: 427 KHP-RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P R S + L R+ P+ +E + +M + C E+RP
Sbjct: 218 QKPYRGMKGSEVTAMLEK--------GERMGCPAGCPRE-MYDLMNL---CWTYDVENRP 265
Query: 486 TMKIVSQQLR 495
V +LR
Sbjct: 266 GFAAVELRLR 275
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 37/74 (50%), Gaps = 15/74 (20%)
Query: 366 SRNNITGDFGIAK-------FLKPDSSNWTGFA-------GTYGYIAPE-LAYTMKITEK 410
SRN GDFG+AK LK DS N G + GT Y+A E L T EK
Sbjct: 152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEK 211
Query: 411 CDVYSFGVLVLEVI 424
D+YS G++ E+I
Sbjct: 212 IDMYSLGIIFFEMI 225
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAK--FLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S NN+ DFG+A+ + PD ++APE + + K DV
Sbjct: 225 LAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDV 284
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+S+GVL+ E+ L + P + D L R+ P S E I +
Sbjct: 285 WSYGVLLWEIFS-------LGGSPYPGVQMDEDFCSRLREGMRMRAPEYSTPE----IYQ 333
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
+ C P+ RP + ++L
Sbjct: 334 IMLDCWHRDPKERPRFAELVEKL 356
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 23/128 (17%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY---GYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 360 ADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA--- 413
Query: 428 HPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPESR 484
+ SP D++ + E+L D R+ P EK+ +M +C + +P R
Sbjct: 414 ------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSDR 463
Query: 485 PTMKIVSQ 492
P+ + Q
Sbjct: 464 PSFAEIHQ 471
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 20/136 (14%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTM---KITEKCDVYSFGVLVLEVIKGKH 428
GDFG A + P + F GT ++APE+ M + K DV+S G+ +E+ + K
Sbjct: 157 GDFGSASIMAPANX----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 212
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P L + ++ S IA +E P L S E + ++ SCL++ P+ RPT +
Sbjct: 213 P---LFNMNAMSALYHIAQNE--SPALQ--SGHWSEYFRNFVD---SCLQKIPQDRPTSE 262
Query: 489 IVSQQ---LRISAPSL 501
++ + LR P++
Sbjct: 263 VLLKHRFVLRERPPTV 278
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 141 AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 201 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGAR---DLISRL------LKHNPSQRPML 248
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 249 REVLEHPWITANS 261
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
D G+A + P+ G GT GY+APE+ + T D ++ G L+ E+I G+ P
Sbjct: 329 DLGLAVHV-PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT----YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426
GDFG+++ + S+++ G ++ PE K T + DV+SFGV++ E+ G
Sbjct: 177 GDFGMSRDIY--STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYG 234
Query: 427 KHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
K P LS+T +++ E+ PR P ++ +IM C + P+ R +
Sbjct: 235 KQPWYQLSNTE--AIDCITQGRELERPRACPP------EVYAIMR---GCWQREPQQRHS 283
Query: 487 MKIVSQQLRISAPS 500
+K V +L+ A +
Sbjct: 284 IKDVHARLQALAQA 297
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 20/136 (14%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTM---KITEKCDVYSFGVLVLEVIKGKH 428
GDFG A + P + F GT ++APE+ M + K DV+S G+ +E+ + K
Sbjct: 196 GDFGSASIMAPANX----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 251
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P L + ++ S IA +E P L S E + ++ SCL++ P+ RPT +
Sbjct: 252 P---LFNMNAMSALYHIAQNE--SPALQ--SGHWSEYFRNFVD---SCLQKIPQDRPTSE 301
Query: 489 IVSQQ---LRISAPSL 501
++ + LR P++
Sbjct: 302 VLLKHRFVLRERPPTV 317
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 147 AGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 207 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGA---RDLISRL------LKHNPSQRPML 254
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 255 REVLEHPWITANS 267
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 15/119 (12%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A L F GT ++APE+ K D++S G+ +E+ KG+ P
Sbjct: 158 ADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP-- 215
Query: 432 FLSSTSSPSLNTDIALDEM--LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
N+D+ + L P+ P+ Q E +CL + P RPT K
Sbjct: 216 ----------NSDLHPMRVLFLIPKNSPPTLEGQHSK-PFKEFVEACLNKDPRFRPTAK 263
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 144 AGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 204 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGAR---DLISRL------LKHNPSQRPML 251
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 252 REVLEHPWITANS 264
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL ++ D+++ G ++ +++ G P
Sbjct: 175 DFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 146 AGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 206 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGA---RDLISRL------LKHNPSQRPML 253
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 254 REVLEHPWITANS 266
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 371 TGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ + N TG ++A E T K T K DV+SFGVL+ E++
Sbjct: 172 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 231
Query: 427 KHPRDFLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
P P +NT DI + + RL P + EV C E RP
Sbjct: 232 GAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRP 280
Query: 486 TM-KIVSQQLRISA 498
+ ++VS RISA
Sbjct: 281 SFSELVS---RISA 291
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYG-----YIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426
DFG++K L+ D + + A T+G + APE K + K DV+SFGVL+ E G
Sbjct: 168 DFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 225
Query: 427 KHP-RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P R S + L R+ P+ +E + +M + C E+RP
Sbjct: 226 QKPYRGMKGSEVTAMLEK--------GERMGCPAGCPRE-MYDLMNL---CWTYDVENRP 273
Query: 486 TMKIVSQQLR 495
V +LR
Sbjct: 274 GFAAVELRLR 283
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
D G+A + P+ G GT GY+APE+ + T D ++ G L+ E+I G+ P
Sbjct: 329 DLGLAVHV-PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 144 AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 204 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGA---RDLISRL------LKHNPSQRPML 251
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 252 REVLEHPWITANS 264
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 144 AGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 204 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGA---RDLISRL------LKHNPSQRPML 251
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 252 REVLEHPWITANS 264
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 161 AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 221 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGAR---DLISRL------LKHNPSQRPML 268
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 269 REVLEHPWITANS 281
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 371 TGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ + N TG ++A E T K T K DV+SFGVL+ E++
Sbjct: 193 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 252
Query: 427 KHPRDFLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
P P +NT DI + + RL P + EV C E RP
Sbjct: 253 GAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRP 301
Query: 486 TM-KIVSQQLRISA 498
+ ++VS RISA
Sbjct: 302 SFSELVS---RISA 312
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 371 TGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ + N TG ++A E T K T K DV+SFGVL+ E++
Sbjct: 173 VADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 232
Query: 427 KHPRDFLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
P P +NT DI + + RL P + EV C E RP
Sbjct: 233 GAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRP 281
Query: 486 TM-KIVSQQLRISA 498
+ ++VS RISA
Sbjct: 282 SFSELVS---RISA 292
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 143 AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 203 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGAR---DLISRL------LKHNPSQRPML 250
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 251 REVLEHPWITANS 263
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 371 TGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ + N TG ++A E T K T K DV+SFGVL+ E++
Sbjct: 179 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 238
Query: 427 KHPRDFLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
P P +NT DI + + RL P + EV C E RP
Sbjct: 239 GAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRP 287
Query: 486 TM-KIVSQQLRISA 498
+ ++VS RISA
Sbjct: 288 SFSELVS---RISA 298
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 147 AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 207 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGA---RDLISRL------LKHNPSQRPML 254
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 255 REVLEHPWITANS 267
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 147 AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 207 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGAR---DLISRL------LKHNPSQRPML 254
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 255 REVLEHPWITANS 267
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 371 TGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ + N TG ++A E T K T K DV+SFGVL+ E++
Sbjct: 175 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 234
Query: 427 KHPRDFLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
P P +NT DI + + RL P + EV C E RP
Sbjct: 235 GAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRP 283
Query: 486 TM-KIVSQQLRISA 498
+ ++VS RISA
Sbjct: 284 SFSELVS---RISA 294
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 371 TGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ + N TG ++A E T K T K DV+SFGVL+ E++
Sbjct: 174 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 233
Query: 427 KHPRDFLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
P P +NT DI + + RL P + EV C E RP
Sbjct: 234 GAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRP 282
Query: 486 TM-KIVSQQLRISA 498
+ ++VS RISA
Sbjct: 283 SFSELVS---RISA 293
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG+ K D F GT YIAPE+ + D ++FGVL+ E++ G+ P
Sbjct: 163 ADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 148 AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 208 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGA---RDLISRL------LKHNPSQRPML 255
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 256 REVLEHPWITANS 268
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 149 AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 209 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGAR---DLISRL------LKHNPSQRPML 256
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 257 REVLEHPWITANS 269
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 371 TGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ + N TG ++A E T K T K DV+SFGVL+ E++
Sbjct: 173 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 232
Query: 427 KHPRDFLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
P P +NT DI + + RL P + EV C E RP
Sbjct: 233 GAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRP 281
Query: 486 TM-KIVSQQLRISA 498
+ ++VS RISA
Sbjct: 282 SFSELVS---RISA 292
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 149 AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 209 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGA---RDLISRL------LKHNPSQRPML 256
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 257 REVLEHPWITANS 269
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG A+ PD+ T Y APEL E CD++S GV++ ++ G+ P
Sbjct: 152 DFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAK--FLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S N+ DFG+A+ + PD ++APE + T + DV
Sbjct: 170 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 229
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+SFGVL+ E+ L ++ P + D L R+ P + E ++++
Sbjct: 230 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 282
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C P RPT + + L
Sbjct: 283 ----CWHGEPSQRPTFSELVEHL 301
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 371 TGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ + N TG ++A E T K T K DV+SFGVL+ E++
Sbjct: 174 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 233
Query: 427 KHPRDFLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
P P +NT DI + + RL P + EV C E RP
Sbjct: 234 GAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRP 282
Query: 486 TM-KIVSQQLRISA 498
+ ++VS RISA
Sbjct: 283 SFSELVS---RISA 293
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GK 427
DFG+A+ + + + +T G + APE T K DV+SFG+L+ E++ GK
Sbjct: 152 ADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGK 209
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLP-VPSCSVQEKLISIMEVGFSCLKESPESRPT 486
P N D+ R+P V +C ++L IM++ C KE E RPT
Sbjct: 210 IP-------YPGRTNADVMTALSQGYRMPRVENCP--DELYDIMKM---CWKEKAEERPT 257
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 61/134 (45%), Gaps = 20/134 (14%)
Query: 371 TGDFGIAKFL---KPDS-SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ + + DS N TG ++A E T K T K DV+SFGVL+ E++
Sbjct: 175 VADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 234
Query: 427 KHPRDFLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
P P +NT DI + + RL P + EV C E RP
Sbjct: 235 GAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRP 283
Query: 486 TM-KIVSQQLRISA 498
+ ++VS RISA
Sbjct: 284 SFSELVS---RISA 294
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 371 TGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ + N TG ++A E T K T K DV+SFGVL+ E++
Sbjct: 174 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 233
Query: 427 KHPRDFLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
P P +NT DI + + RL P + EV C E RP
Sbjct: 234 GAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRP 282
Query: 486 TM-KIVSQQLRISA 498
+ ++VS RISA
Sbjct: 283 SFSELVS---RISA 293
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 371 TGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ + N TG ++A E T K T K DV+SFGVL+ E++
Sbjct: 174 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 233
Query: 427 KHPRDFLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
P P +NT DI + + RL P + EV C E RP
Sbjct: 234 GAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRP 282
Query: 486 TM-KIVSQQLRISA 498
+ ++VS RISA
Sbjct: 283 SFSELVS---RISA 293
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 371 TGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ + N TG ++A E T K T K DV+SFGVL+ E++
Sbjct: 166 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 225
Query: 427 KHPRDFLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
P P +NT DI + + RL P + EV C E RP
Sbjct: 226 GAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRP 274
Query: 486 TM-KIVSQQLRISA 498
+ ++VS RISA
Sbjct: 275 SFSELVS---RISA 285
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 371 TGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ + N TG ++A E T K T K DV+SFGVL+ E++
Sbjct: 171 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 230
Query: 427 KHPRDFLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
P P +NT DI + + RL P + EV C E RP
Sbjct: 231 GAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRP 279
Query: 486 TM-KIVSQQLRISA 498
+ ++VS RISA
Sbjct: 280 SFSELVS---RISA 290
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 371 TGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ + N TG ++A E T K T K DV+SFGVL+ E++
Sbjct: 192 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 251
Query: 427 KHPRDFLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
P P +NT DI + + RL P + EV C E RP
Sbjct: 252 GAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRP 300
Query: 486 TM-KIVSQQLRISA 498
+ ++VS RISA
Sbjct: 301 SFSELVS---RISA 311
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 371 TGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ + N TG ++A E T K T K DV+SFGVL+ E++
Sbjct: 169 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 228
Query: 427 KHPRDFLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
P P +NT DI + + RL P + EV C E RP
Sbjct: 229 GAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRP 277
Query: 486 TM-KIVSQQLRISA 498
+ ++VS RISA
Sbjct: 278 SFSELVS---RISA 288
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 371 TGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ + N TG ++A E T K T K DV+SFGVL+ E++
Sbjct: 172 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 231
Query: 427 KHPRDFLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
P P +NT DI + + RL P + EV C E RP
Sbjct: 232 GAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRP 280
Query: 486 TM-KIVSQQLRISA 498
+ ++VS RISA
Sbjct: 281 SFSELVS---RISA 291
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F SS T +GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 145 AGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 205 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGA---RDLISRL------LKHNPSQRPML 252
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 253 REVLEHPWITANS 265
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDS--SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S + F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 173 DFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYG-----YIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426
DFG++K L+ D + + A T+G + APE K + K DV+SFGVL+ E G
Sbjct: 170 DFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 227
Query: 427 KHP-RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P R S + L R+ P+ +E + +M + C E+RP
Sbjct: 228 QKPYRGMKGSEVTAMLEK--------GERMGCPAGCPRE-MYDLMNL---CWTYDVENRP 275
Query: 486 TMKIVSQQLR 495
V +LR
Sbjct: 276 GFAAVELRLR 285
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYG-----YIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426
DFG++K L+ D + + A T+G + APE K + K DV+SFGVL+ E G
Sbjct: 170 DFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 227
Query: 427 KHP-RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
+ P R S + L R+ P+ +E + +M + C E+RP
Sbjct: 228 QKPYRGMKGSEVTAMLEK--------GERMGCPAGCPRE-MYDLMNL---CWTYDVENRP 275
Query: 486 TMKIVSQQLR 495
V +LR
Sbjct: 276 GFAAVELRLR 285
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAK--FLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S N+ DFG+A+ + PD ++APE + T + DV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+SFGVL+ E+ L ++ P + D L R+ P + E ++++
Sbjct: 234 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C P RPT + + L
Sbjct: 287 ----CWHGEPSQRPTFSELVEHL 305
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GDFG+A ++ D GT YIAPE+ + + DV+S G ++ ++ GK P
Sbjct: 163 GDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG + + GT ++APEL + + D++S G++V+E++ G+ P
Sbjct: 213 DFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--- 269
Query: 433 LSSTSSPSLNTDIALDEMLDPRL 455
+ P L + + L PRL
Sbjct: 270 --YFNEPPLKAMKMIRDNLPPRL 290
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GDFG+A ++ D GT YIAPE+ + + DV+S G ++ ++ GK P
Sbjct: 159 GDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAK--FLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S N+ DFG+A+ + PD ++APE + T + DV
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+SFGVL+ E+ L ++ P + D L R+ P + E ++++
Sbjct: 225 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C P RPT + + L
Sbjct: 278 ----CWHGEPSQRPTFSELVEHL 296
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GDFG+A ++ D GT YIAPE+ + + DV+S G ++ ++ GK P
Sbjct: 159 GDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE EK D++S GVL E + GK
Sbjct: 149 AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 209 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGA---RDLISRL------LKHNPSQRPXL 256
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 257 REVLEHPWITANS 269
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 170 AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 230 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGAR---DLISRL------LKHNPSQRPML 277
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 278 REVLEHPWITANS 290
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG + + GT ++APEL + + D++S G++V+E++ G+ P
Sbjct: 290 DFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--- 346
Query: 433 LSSTSSPSLNTDIALDEMLDPRL 455
+ P L + + L PRL
Sbjct: 347 --YFNEPPLKAMKMIRDNLPPRL 367
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 371 TGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ + N TG ++A E T K T K DV+SFGVL+ E++
Sbjct: 233 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 292
Query: 427 KHPRDFLSSTSSPSLNT-DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP 485
P P +NT DI + + RL P + EV C E RP
Sbjct: 293 GAP-------PYPDVNTFDITVYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRP 341
Query: 486 TM-KIVSQQLRISA 498
+ ++VS RISA
Sbjct: 342 SFSELVS---RISA 352
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAK--FLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S N+ DFG+A+ + PD ++APE + T + DV
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+SFGVL+ E+ L ++ P + D L R+ P + E ++++
Sbjct: 225 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C P RPT + + L
Sbjct: 278 ----CWHGEPSQRPTFSELVEHL 296
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 178 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 176 DFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 152 VADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA-- 206
Query: 427 KHPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ SP D++ + E+L D R+ P EK+ +M +C + +P
Sbjct: 207 -------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSD 255
Query: 484 RPTMKIVSQ 492
RP+ + Q
Sbjct: 256 RPSFAEIHQ 264
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 153 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 175 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 175 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 180 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 175 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAK--FLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S N+ DFG+A+ + PD ++APE + T + DV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+SFGVL+ E+ L ++ P + D L R+ P + E ++++
Sbjct: 234 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C P RPT + + L
Sbjct: 287 ----CWHGEPSQRPTFSELVEHL 305
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 175 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 165 VADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA-- 219
Query: 427 KHPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ SP D++ + E+L D R+ P EK+ +M +C + +P
Sbjct: 220 -------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSD 268
Query: 484 RPTMKIVSQ 492
RP+ + Q
Sbjct: 269 RPSFAEIHQ 277
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 173 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 175 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 152 VADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA-- 206
Query: 427 KHPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ SP D++ + E+L D R+ P EK+ +M +C + +P
Sbjct: 207 -------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSD 255
Query: 484 RPTMKIVSQ 492
RP+ + Q
Sbjct: 256 RPSFAEIHQ 264
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 156 VADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA-- 210
Query: 427 KHPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ SP D++ + E+L D R+ P EK+ +M +C + +P
Sbjct: 211 -------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSD 259
Query: 484 RPTMKIVSQ 492
RP+ + Q
Sbjct: 260 RPSFAEIHQ 268
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAK--FLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S N+ DFG+A+ + PD ++APE + T + DV
Sbjct: 176 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 235
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+SFGVL+ E+ L ++ P + D L R+ P + E ++++
Sbjct: 236 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 288
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C P RPT + + L
Sbjct: 289 ----CWHGEPSQRPTFSELVEHL 307
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 176 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 173 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 151 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG + + GT ++APEL + + D++S G++V+E++ G+ P
Sbjct: 168 DFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--- 224
Query: 433 LSSTSSPSLNTDIALDEMLDPRL 455
+ P L + + L PRL
Sbjct: 225 --YFNEPPLKAMKMIRDNLPPRL 245
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG + + GT ++APEL + + D++S G++V+E++ G+ P
Sbjct: 170 DFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--- 226
Query: 433 LSSTSSPSLNTDIALDEMLDPRL 455
+ P L + + L PRL
Sbjct: 227 --YFNEPPLKAMKMIRDNLPPRL 247
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 152 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 157 VADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA-- 211
Query: 427 KHPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ SP D++ + E+L D R+ P EK+ +M +C + +P
Sbjct: 212 -------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSD 260
Query: 484 RPTMKIVSQ 492
RP+ + Q
Sbjct: 261 RPSFAEIHQ 269
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 173 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 154 VADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA-- 208
Query: 427 KHPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ SP D++ + E+L D R+ P EK+ +M +C + +P
Sbjct: 209 -------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSD 257
Query: 484 RPTMKIVSQ 492
RP+ + Q
Sbjct: 258 RPSFAEIHQ 266
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAK--FLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S N+ DFG+A+ + PD ++APE + T + DV
Sbjct: 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 270
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+SFGVL+ E+ L ++ P + D L R+ P + E ++++
Sbjct: 271 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 323
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C P RPT + + L
Sbjct: 324 ----CWHGEPSQRPTFSELVEHL 342
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%)
Query: 140 GLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLH 199
G + HL L + NQL G P S + EL L N + L Q+ L L+
Sbjct: 51 GRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLY 110
Query: 200 DNSFSGFIPPDIGNLKSISILSLAINQFS 228
DN S +P +L S++ L+LA N F+
Sbjct: 111 DNQISCVMPGSFEHLNSLTSLNLASNPFN 139
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 23/128 (17%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 158 ADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA--- 211
Query: 428 HPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPESR 484
+ SP D++ + E+L D R+ P EK+ +M +C + +P R
Sbjct: 212 ------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSDR 261
Query: 485 PTMKIVSQ 492
P+ + Q
Sbjct: 262 PSFAEIHQ 269
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 147 AGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 207 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGA---RDLISRL------LKHNPSQRPML 254
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 255 REVLEHPWITANS 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 154 VADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA-- 208
Query: 427 KHPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ SP D++ + E+L D R+ P EK+ +M +C + +P
Sbjct: 209 -------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSD 257
Query: 484 RPTMKIVSQ 492
RP+ + Q
Sbjct: 258 RPSFAEIHQ 266
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 150 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 21/191 (10%)
Query: 131 FSGNIPHEVGLM---SHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSL 187
+GN ++G + ++L L + +NQ+ PL L+ + EL L +N ++ P L
Sbjct: 224 LNGNQLKDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQISNISP--L 279
Query: 188 GNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLV 247
LT ++ L L++N P I NLK+++ L+L N S P+S +LT L++
Sbjct: 280 AGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRL-FF 334
Query: 248 YNNLYGSIPPSLDNLV-LTKLSLDDNHFTSYLP-QNICRGGAL----QIFTVSENRFQG- 300
YNN + SL NL + LS N + P N+ R L Q +T + ++
Sbjct: 335 YNNKVSDV-SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKAN 393
Query: 301 -TIPKSLRNCT 310
+IP +++N T
Sbjct: 394 VSIPNTVKNVT 404
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 35/74 (47%), Gaps = 15/74 (20%)
Query: 366 SRNNITGDFGIAK-------FLKPDSSNWTGFA-------GTYGYIAPE-LAYTMKITEK 410
SRN GDFG+AK LK DS N G + GT Y+A E L T EK
Sbjct: 152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEK 211
Query: 411 CDVYSFGVLVLEVI 424
D YS G++ E I
Sbjct: 212 IDXYSLGIIFFEXI 225
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 21/191 (10%)
Query: 131 FSGNIPHEVGLM---SHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSL 187
+GN ++G + ++L L + +NQ+ PL L+ + EL L +N ++ P L
Sbjct: 224 LNGNQLKDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQISNISP--L 279
Query: 188 GNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLV 247
LT ++ L L++N P I NLK+++ L+L N S P+S +LT L++
Sbjct: 280 AGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRL-FF 334
Query: 248 YNNLYGSIPPSLDNLV-LTKLSLDDNHFTSYLP-QNICRGGAL----QIFTVSENRFQG- 300
YNN + SL NL + LS N + P N+ R L Q +T + ++
Sbjct: 335 YNNKVSDV-SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKAN 393
Query: 301 -TIPKSLRNCT 310
+IP +++N T
Sbjct: 394 VSIPNTVKNVT 404
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 152 VADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA-- 206
Query: 427 KHPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ SP D++ + E+L D R+ P EK+ +M +C + +P
Sbjct: 207 -------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSD 255
Query: 484 RPTMKIVSQ 492
RP+ + Q
Sbjct: 256 RPSFAEIHQ 264
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAK--FLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S N+ DFG+A+ + PD ++APE + T + DV
Sbjct: 226 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 285
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+SFGVL+ E+ L ++ P + D L R+ P + E ++++
Sbjct: 286 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 338
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C P RPT + + L
Sbjct: 339 ----CWHGEPSQRPTFSELVEHL 357
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAK--FLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S N+ DFG+A+ + PD ++APE + T + DV
Sbjct: 219 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 278
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+SFGVL+ E+ L ++ P + D L R+ P + E ++++
Sbjct: 279 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 331
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C P RPT + + L
Sbjct: 332 ----CWHGEPSQRPTFSELVEHL 350
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAK--FLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S N+ DFG+A+ + PD ++APE + T + DV
Sbjct: 224 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 283
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+SFGVL+ E+ L ++ P + D L R+ P + E ++++
Sbjct: 284 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 336
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C P RPT + + L
Sbjct: 337 ----CWHGEPSQRPTFSELVEHL 355
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 157 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 152 VADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA-- 206
Query: 427 KHPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ SP D++ + E+L D R+ P EK+ +M +C + +P
Sbjct: 207 -------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSD 255
Query: 484 RPTMKIVSQ 492
RP+ + Q
Sbjct: 256 RPSFAEIHQ 264
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAK--FLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S N+ DFG+A+ + PD ++APE + T + DV
Sbjct: 217 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 276
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+SFGVL+ E+ L ++ P + D L R+ P + E ++++
Sbjct: 277 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 329
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C P RPT + + L
Sbjct: 330 ----CWHGEPSQRPTFSELVEHL 348
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 335 NLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGTY 394
N+ F++ Y E S C + N S DFG A F D + T T
Sbjct: 162 NILFVNSEFETLYNEHKS----CEEKSVKNTSIR--VADFGSATF---DHEHHTTIVATR 212
Query: 395 GYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
Y PE+ + + CDV+S G ++ E +G
Sbjct: 213 HYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 23/128 (17%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 153 ADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA--- 206
Query: 428 HPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPESR 484
+ SP D++ + E+L D R+ P EK+ +M +C + +P R
Sbjct: 207 ------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSDR 256
Query: 485 PTMKIVSQ 492
P+ + Q
Sbjct: 257 PSFAEIHQ 264
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG + + GT ++APEL + + D++S G++V+E++ G+ P
Sbjct: 159 DFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--- 215
Query: 433 LSSTSSPSLNTDIALDEMLDPRL 455
+ P L + + L PRL
Sbjct: 216 --YFNEPPLKAMKMIRDNLPPRL 236
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 152 VADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA-- 206
Query: 427 KHPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ SP D++ + E+L D R+ P EK+ +M +C + +P
Sbjct: 207 -------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSD 255
Query: 484 RPTMKIVSQ 492
RP+ + Q
Sbjct: 256 RPSFAEIHQ 264
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 172 DFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 157 VADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA-- 211
Query: 427 KHPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ SP D++ + E+L D R+ P EK+ +M +C + +P
Sbjct: 212 -------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSD 260
Query: 484 RPTMKIVSQ 492
RP+ + Q
Sbjct: 261 RPSFAEIHQ 269
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 360 LGALNI--SRNNITG--DFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCD 412
L A NI + IT DFG+A+ +K DS N+ ++APE + T + D
Sbjct: 194 LAARNILLTHGRITKICDFGLARHIKNDS-NYVVKGNARLPVKWMAPESIFNCVYTFESD 252
Query: 413 VYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIM 470
V+S+G+ + E+ L S+ P + D +M+ R+ P + E + IM
Sbjct: 253 VWSYGIFLWELFS-------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAE-MYDIM 304
Query: 471 EVGFSCLKESPESRPTMKIVSQ 492
+ +C P RPT K + Q
Sbjct: 305 K---TCWDADPLKRPTFKQIVQ 323
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG + + GT ++APEL + + D++S G++V+E++ G+ P
Sbjct: 163 DFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--- 219
Query: 433 LSSTSSPSLNTDIALDEMLDPRL 455
+ P L + + L PRL
Sbjct: 220 --YFNEPPLKAMKMIRDNLPPRL 240
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 363 LNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLE 422
LN + GDFG+A ++ D GT YIAPE+ + + D++S G ++
Sbjct: 159 LNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 218
Query: 423 VIKGKHP 429
++ GK P
Sbjct: 219 LLVGKPP 225
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 335 NLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGTY 394
N+ F++ Y E S C + N S DFG A F D + T T
Sbjct: 153 NILFVNSEFETLYNEHKS----CEEKSVKNTSIR--VADFGSATF---DHEHHTTIVATR 203
Query: 395 GYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
Y PE+ + + CDV+S G ++ E +G
Sbjct: 204 HYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 144 AGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 204 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGAR---DLISRL------LKHNPSQRPML 251
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 252 REVLEHPWITANS 264
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 23/128 (17%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 158 ADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA--- 211
Query: 428 HPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPESR 484
+ SP D++ + E+L D R+ P EK+ +M +C + +P R
Sbjct: 212 ------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSDR 261
Query: 485 PTMKIVSQ 492
P+ + Q
Sbjct: 262 PSFAEIHQ 269
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 373 DFGIAKFLKPDSSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L P+S F GT Y++PEL + D+++ G ++ +++ G P
Sbjct: 172 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 363 LNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLE 422
LN + GDFG+A ++ D GT YIAPE+ + + D++S G ++
Sbjct: 175 LNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 234
Query: 423 VIKGKHP 429
++ GK P
Sbjct: 235 LLVGKPP 241
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GDFG+A ++ D GT YIAPE+ + + DV+S G ++ ++ GK P
Sbjct: 181 GDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GDFG+A ++ D GT YIAPE+ + + DV+S G ++ ++ GK P
Sbjct: 183 GDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 335 NLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGTY 394
N+ F++ Y E S C + N S DFG A F D + T T
Sbjct: 185 NILFVNSEFETLYNEHKS----CEEKSVKNTSIR--VADFGSATF---DHEHHTTIVATR 235
Query: 395 GYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
Y PE+ + + CDV+S G ++ E +G
Sbjct: 236 HYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 144 AGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 204 PP--FEANTYQDTYKR-ISRVEFTFPDFVTEGA---RDLISRL------LKHNPSQRPML 251
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 252 REVLEHPWITANS 264
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 15/133 (11%)
Query: 373 DFGIAKFLKPDSSNWTGF-AGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG++K L D S +T AG + + APE K + + DV+S+GV + E + G+
Sbjct: 153 DFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK 212
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P P + I + ++ P P C + L ++M C E RP
Sbjct: 213 P---YKKMKGPEVMAFIEQGKRME--CP-PECPPE--LYALMS---DCWIYKWEDRPDFL 261
Query: 489 IVSQQLRISAPSL 501
V Q++R SL
Sbjct: 262 TVEQRMRACYYSL 274
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAKFL--KPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S N+ DFG+A+ + PD ++APE + T + DV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+SFGVL+ E+ L ++ P + D L R+ P + E ++++
Sbjct: 234 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C P RPT + + L
Sbjct: 287 ----CWHGEPSQRPTFSELVEHL 305
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 21/191 (10%)
Query: 131 FSGNIPHEVGLM---SHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSL 187
+GN ++G + ++L L + +NQ+ PL L+ + EL L +N ++ P L
Sbjct: 228 LNGNQLKDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQISNISP--L 283
Query: 188 GNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLV 247
LT ++ L L++N P I NLK+++ L+L N S P+S +LT L++
Sbjct: 284 AGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRL-FF 338
Query: 248 YNNLYGSIPPSLDNLV-LTKLSLDDNHFTSYLP-QNICRGGAL----QIFTVSENRFQG- 300
YNN + SL NL + LS N + P N+ R L Q +T + ++
Sbjct: 339 YNNKVSDV-SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKAN 397
Query: 301 -TIPKSLRNCT 310
+IP +++N T
Sbjct: 398 VSIPNTVKNVT 408
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 23/128 (17%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+++ + D+ T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 158 ADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA--- 211
Query: 428 HPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPESR 484
+ SP D++ + E+L D R+ P EK+ +M +C + +P R
Sbjct: 212 ------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSDR 261
Query: 485 PTMKIVSQ 492
P+ + Q
Sbjct: 262 PSFAEIHQ 269
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 140 GLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLH 199
G+ + LY+D NQ +P E+ + + L +N ++ S N+TQ+ L L
Sbjct: 28 GIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILS 86
Query: 200 DNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLY 252
N P LKS+ +LSL N S + +L+ L ++ N LY
Sbjct: 87 YNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 193 ISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLY 252
++ L+L N F+ +P ++ N K ++++ L+ N+ S S N+T L L YN L
Sbjct: 33 VTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 91
Query: 253 GSIPPSLDNL-VLTKLSLDDNHFTSYLPQ 280
P + D L L LSL N S +P+
Sbjct: 92 CIPPRTFDGLKSLRLLSLHGNDI-SVVPE 119
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 40/91 (43%)
Query: 135 IPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQIS 194
+P E+ HL ++ + +N++ ++ ++ L L N L P + L +
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 195 MLFLHDNSFSGFIPPDIGNLKSISILSLAIN 225
+L LH N S +L ++S L++ N
Sbjct: 106 LLSLHGNDISVVPEGAFNDLSALSHLAIGAN 136
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 21/191 (10%)
Query: 131 FSGNIPHEVGLM---SHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSL 187
+GN ++G + ++L L + +NQ+ PL L+ + EL L +N ++ P L
Sbjct: 223 LNGNQLKDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQISNISP--L 278
Query: 188 GNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLV 247
LT ++ L L++N P I NLK+++ L+L N S P+S +LT L++
Sbjct: 279 AGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRL-FF 333
Query: 248 YNNLYGSIPPSLDNLV-LTKLSLDDNHFTSYLP-QNICRGGAL----QIFTVSENRFQG- 300
YNN + SL NL + LS N + P N+ R L Q +T + ++
Sbjct: 334 YNNKVSDV-SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKAN 392
Query: 301 -TIPKSLRNCT 310
+IP +++N T
Sbjct: 393 VSIPNTVKNVT 403
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 363 LNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLE 422
LN + GDFG+A ++ D GT YIAPE+ + + D++S G ++
Sbjct: 175 LNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 234
Query: 423 VIKGKHP 429
++ GK P
Sbjct: 235 LLVGKPP 241
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 363 LNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLE 422
LN + GDFG+A ++ D GT YIAPE+ + + D++S G ++
Sbjct: 175 LNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 234
Query: 423 VIKGKHP 429
++ GK P
Sbjct: 235 LLVGKPP 241
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 360 LGALNISRN-NIT-GDFGIAKFLK-PDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSF 416
L L ++RN NI DFG+A LK P ++T GT YI+PE+A + DV+S
Sbjct: 140 LSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATRSAHGLESDVWSL 198
Query: 417 GVLVLEVIKGKHPRDFLSSTSSPSLNTDIALD 448
G + ++ G+ P D + T +LN + D
Sbjct: 199 GCMFYTLLIGRPPFD--TDTVKNTLNKVVLAD 228
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++K F GT Y+APE+ + D +S+GVL+ E++ G P
Sbjct: 173 DFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GDFG+A ++ D GT YIAPE+ + + DV+S G ++ ++ GK P
Sbjct: 157 GDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 23/129 (17%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+++ + D+ T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 153 VADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA-- 207
Query: 427 KHPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ SP D++ + E+L D R+ P EK+ +M +C + +P
Sbjct: 208 -------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSD 256
Query: 484 RPTMKIVSQ 492
RP+ + Q
Sbjct: 257 RPSFAEIHQ 265
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAKFL--KPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S N+ DFG+A+ + PD ++APE + T + DV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+SFGVL+ E+ L ++ P + D L R+ P + E ++++
Sbjct: 234 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C P RPT + + L
Sbjct: 287 ----CWHGEPSQRPTFSELVEHL 305
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 8/100 (8%)
Query: 142 MSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDN 201
+S+L++LY+D NQ+ PL L+++ L++ +N +N P L NL++++ L DN
Sbjct: 134 LSNLQVLYLDLNQITNISPL--AGLTNLQYLSIGNNQVNDLTP--LANLSKLTTLRADDN 189
Query: 202 SFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNL 241
S P + +L ++ + L NQ S PL+ NL+NL
Sbjct: 190 KISDISP--LASLPNLIEVHLKDNQISDVSPLA--NLSNL 225
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAKFL--KPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S N+ DFG+A+ + PD ++APE + T + DV
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+SFGVL+ E+ L ++ P + D L R+ P + E ++++
Sbjct: 225 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C P RPT + + L
Sbjct: 278 ----CWHGEPSQRPTFSELVEHL 296
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAKFL--KPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S N+ DFG+A+ + PD ++APE + T + DV
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+SFGVL+ E+ L ++ P + D L R+ P + E ++++
Sbjct: 225 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C P RPT + + L
Sbjct: 278 ----CWHGEPSQRPTFSELVEHL 296
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A L F GT ++APE+ K D++S G+ +E+ +G+ P
Sbjct: 161 ADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS 220
Query: 432 FL 433
L
Sbjct: 221 EL 222
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 360 LGALNI--SRNNITG--DFGIAKFL--KPDSSNWTGFAGTYGYIAPELAYTMKITEKCDV 413
L A NI S N+ DFG+A+ + PD ++APE + T + DV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIME 471
+SFGVL+ E+ L ++ P + D L R+ P + E ++++
Sbjct: 234 WSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C P RPT + + L
Sbjct: 287 ----CWHGEPSQRPTFSELVEHL 305
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L+ ++ T ++APE+ E CD++S G+L+ ++ G P
Sbjct: 168 DFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 27/125 (21%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A L F GT ++APE+ K D++S G+ +E+ +G+ P
Sbjct: 166 ADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS 225
Query: 432 --------FLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
FL ++P P + + L +E +CL + P
Sbjct: 226 ELHPMKVLFLIPKNNP----------------PTLEGNYSKPLKEFVE---ACLNKEPSF 266
Query: 484 RPTMK 488
RPT K
Sbjct: 267 RPTAK 271
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
GD G+ +F ++ GT Y++PE + K D++S G L+ E+ + P
Sbjct: 178 GDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF- 236
Query: 432 FLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIV 490
+ + SL I E D P+PS E+L ++ + C+ PE RP + V
Sbjct: 237 YGDKMNLYSLCKKI---EQCD-YPPLPSDHYSEELRQLVNM---CINPDPEKRPDVTYV 288
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 32/170 (18%)
Query: 131 FSGNIPHEVGLM---SHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSL 187
+GN ++G + ++L L + +NQ+ PL L+ + EL L +N ++ P L
Sbjct: 224 LNGNQLKDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQISNISP--L 279
Query: 188 GNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPL-------------- 233
LT ++ L L++N P I NLK+++ L+L N S P+
Sbjct: 280 AGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFSNN 337
Query: 234 ------SLGNLTNLKQFSLVYNNLYGSIPPSLDNLV-LTKLSLDDNHFTS 276
SL NLTN+ S +N + P L NL +T+L L+D +T+
Sbjct: 338 KVSDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 385
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 83/187 (44%), Gaps = 31/187 (16%)
Query: 318 DGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNI------- 370
+G++L ++ + + ID++R G ++ + ++ NNI
Sbjct: 102 EGSSLYHHLHASETKFEMKKLIDIARQTARG---MDYLHAKSIIHRDLKSNNIFLHEDNT 158
Query: 371 --TGDFGIAKFLKPDSSNWTG------FAGTYGYIAPELAYTMK---ITEKCDVYSFGVL 419
GDFG+A + S W+G +G+ ++APE+ + + DVY+FG++
Sbjct: 159 VKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIV 214
Query: 420 VLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKE 479
+ E++ G+ P S+ ++ ++ L P L + +++ +M CLK+
Sbjct: 215 LYELMTGQLP---YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA---ECLKK 268
Query: 480 SPESRPT 486
+ RP+
Sbjct: 269 KRDERPS 275
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 27/125 (21%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A L F GT ++APE+ K D++S G+ +E+ +G+ P
Sbjct: 146 ADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS 205
Query: 432 --------FLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
FL ++P P + + L +E +CL + P
Sbjct: 206 ELHPMKVLFLIPKNNP----------------PTLEGNYSKPLKEFVE---ACLNKEPSF 246
Query: 484 RPTMK 488
RPT K
Sbjct: 247 RPTAK 251
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 372 GDFGIAKFLKPDSSNWTG------FAGTYGYIAPELAYTMK---ITEKCDVYSFGVLVLE 422
GDFG+A + S W+G +G+ ++APE+ + + DVY+FG+++ E
Sbjct: 162 GDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE 217
Query: 423 VIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPE 482
++ G+ P S+ ++ ++ L P L + +++ +M CLK+ +
Sbjct: 218 LMTGQLP---YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA---ECLKKKRD 271
Query: 483 SRPT 486
RP+
Sbjct: 272 ERPS 275
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 27/125 (21%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A L F GT ++APE+ K D++S G+ +E+ +G+ P
Sbjct: 146 ADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS 205
Query: 432 --------FLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
FL ++P P + + L +E +CL + P
Sbjct: 206 ELHPMKVLFLIPKNNP----------------PTLEGNYSKPLKEFVE---ACLNKEPSF 246
Query: 484 RPTMK 488
RPT K
Sbjct: 247 RPTAK 251
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 16/118 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG++ L + +N F GT Y++PE + + D++S G+ ++E+ G++PR
Sbjct: 151 DFGVSGQLIDEMANE--FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPR-- 206
Query: 433 LSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGF--SCLKESPESRPTMK 488
+A+ E+LD + P + + S+ F CL ++P R +K
Sbjct: 207 ----------PPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLK 254
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L+ ++ T ++APE+ E CD++S G+L+ ++ G P
Sbjct: 168 DFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 32/170 (18%)
Query: 131 FSGNIPHEVGLM---SHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSL 187
+GN ++G + ++L L + +NQ+ PL L+ + EL L +N ++ P L
Sbjct: 227 LNGNQLKDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQISNISP--L 282
Query: 188 GNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPL-------------- 233
LT ++ L L++N P I NLK+++ L+L N S P+
Sbjct: 283 AGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANN 340
Query: 234 ------SLGNLTNLKQFSLVYNNLYGSIPPSLDNLV-LTKLSLDDNHFTS 276
SL NLTN+ S +N + P L NL +T+L L+D +T+
Sbjct: 341 KVSDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 388
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 142 MSHLKILYIDSNQLDGSIPLEV-GQLSSMVELALFSNNLNGSVPHSL-GNLTQISMLFLH 199
++ LK L +++NQL S+P V +L+ + +L L+ N L SVP + LT + ++LH
Sbjct: 99 LTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLH 156
Query: 200 DNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNL 238
DN + P I LS IN+ SG + S G++
Sbjct: 157 DNPWDCTCP-------GIRYLSEWINKHSGVVRNSAGSV 188
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 3/149 (2%)
Query: 157 GSIPLEVGQLSSMVELALFSNNLNGSVPHSL-GNLTQISMLFLHDNSFSGFIPPDIGNLK 215
G + G + L L +N+L S+P+ + LT ++ L+L N L
Sbjct: 18 GRTSVPTGIPAQTTYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLT 76
Query: 216 SISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDNLV-LTKLSLDDNHF 274
S++ L+L+ NQ LT LK+ +L N L D L L L L N
Sbjct: 77 SLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQL 136
Query: 275 TSYLPQNICRGGALQIFTVSENRFQGTIP 303
S R +LQ + +N + T P
Sbjct: 137 KSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 147 AGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 207 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGA---RDLISRL------LKHNPSQRPML 254
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 255 REVLEHPWITANS 267
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 360 LGALNI--SRNNITG--DFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCD 412
L A NI + IT DFG+A+ +K DS N+ ++APE + T + D
Sbjct: 171 LAARNILLTHGRITKICDFGLARDIKNDS-NYVVKGNARLPVKWMAPESIFNCVYTFESD 229
Query: 413 VYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIM 470
V+S+G+ + E+ L S+ P + D +M+ R+ P + E + IM
Sbjct: 230 VWSYGIFLWELFS-------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAE-MYDIM 281
Query: 471 EVGFSCLKESPESRPTMKIVSQ 492
+ +C P RPT K + Q
Sbjct: 282 K---TCWDADPLKRPTFKQIVQ 300
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 147 AGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 207 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGAR---DLISRL------LKHNPSQRPML 254
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 255 REVLEHPWITANS 267
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 32/170 (18%)
Query: 131 FSGNIPHEVGLM---SHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSL 187
+GN ++G + ++L L + +NQ+ PL L+ + EL L +N ++ P L
Sbjct: 223 LNGNQLKDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQISNISP--L 278
Query: 188 GNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPL-------------- 233
LT ++ L L++N P I NLK+++ L+L N S P+
Sbjct: 279 AGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFSNN 336
Query: 234 ------SLGNLTNLKQFSLVYNNLYGSIPPSLDNLV-LTKLSLDDNHFTS 276
SL NLTN+ S +N + P L NL +T+L L+D +T+
Sbjct: 337 KVSDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 384
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 15/133 (11%)
Query: 373 DFGIAKFLKPDSSNWTGF-AGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG++K L D S +T AG + + APE K + + DV+S+GV + E + G+
Sbjct: 479 DFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK 538
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P P + I + ++ P P C + L ++M C E RP
Sbjct: 539 P---YKKMKGPEVMAFIEQGKRME--CP-PECPPE--LYALMS---DCWIYKWEDRPDFL 587
Query: 489 IVSQQLRISAPSL 501
V Q++R SL
Sbjct: 588 TVEQRMRACYYSL 600
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 146 AGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 206 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGA---RDLISRL------LKHNPSQRPML 253
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 254 REVLEHPWITANS 266
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 144 AGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 204 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGAR---DLISRL------LKHNPSQRPML 251
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 252 REVLEHPWITANS 264
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 360 LGALNI--SRNNITG--DFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCD 412
L A NI + IT DFG+A+ +K DS N+ ++APE + T + D
Sbjct: 187 LAARNILLTHGRITKICDFGLARDIKNDS-NYVVKGNARLPVKWMAPESIFNCVYTFESD 245
Query: 413 VYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIM 470
V+S+G+ + E+ L S+ P + D +M+ R+ P + E + IM
Sbjct: 246 VWSYGIFLWELFS-------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAE-MYDIM 297
Query: 471 EVGFSCLKESPESRPTMKIVSQ 492
+ +C P RPT K + Q
Sbjct: 298 K---TCWDADPLKRPTFKQIVQ 316
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 360 LGALNI--SRNNITG--DFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCD 412
L A NI + IT DFG+A+ +K DS N+ ++APE + T + D
Sbjct: 189 LAARNILLTHGRITKICDFGLARDIKNDS-NYVVKGNARLPVKWMAPESIFNCVYTFESD 247
Query: 413 VYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIM 470
V+S+G+ + E+ L S+ P + D +M+ R+ P + E + IM
Sbjct: 248 VWSYGIFLWELFS-------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAE-MYDIM 299
Query: 471 EVGFSCLKESPESRPTMKIVSQ 492
+ +C P RPT K + Q
Sbjct: 300 K---TCWDADPLKRPTFKQIVQ 318
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 360 LGALNI--SRNNITG--DFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCD 412
L A NI + IT DFG+A+ +K DS N+ ++APE + T + D
Sbjct: 194 LAARNILLTHGRITKICDFGLARDIKNDS-NYVVKGNARLPVKWMAPESIFNCVYTFESD 252
Query: 413 VYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIM 470
V+S+G+ + E+ L S+ P + D +M+ R+ P + E + IM
Sbjct: 253 VWSYGIFLWELFS-------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAE-MYDIM 304
Query: 471 EVGFSCLKESPESRPTMKIVSQ 492
+ +C P RPT K + Q
Sbjct: 305 K---TCWDADPLKRPTFKQIVQ 323
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 145 AGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 205 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGA---RDLISRL------LKHNPSQRPML 252
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 253 REVLEHPWITANS 265
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 149 AGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 209 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGAR---DLISRL------LKHNPSQRPML 256
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 257 REVLEHPWITANS 269
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 154 VADFGLSRLMTGDT--YTAPAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA-- 208
Query: 427 KHPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ SP D++ + E+L D R+ P EK+ +M +C + +P
Sbjct: 209 -------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSD 257
Query: 484 RPTMKIVSQ 492
RP+ + Q
Sbjct: 258 RPSFAEIHQ 266
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K + WT GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 205 DFGFAKRVK--GATWT-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + SS GT Y+ PE+ EK D++S GVL E + GK
Sbjct: 170 AGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P F ++T + I+ E P LIS + LK +P RP +
Sbjct: 230 PP--FEANTYQETYKR-ISRVEFTFPDFVTEGAR---DLISRL------LKHNPSQRPML 277
Query: 488 KIVSQQLRISAPS 500
+ V + I+A S
Sbjct: 278 REVLEHPWITANS 290
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 153 VADFGLSRLMTGDT--YTAPAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA-- 207
Query: 427 KHPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ SP D++ + E+L D R+ P EK+ +M +C + +P
Sbjct: 208 -------TYGMSPYPGIDLSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSD 256
Query: 484 RPTMKIVSQ 492
RP+ + Q
Sbjct: 257 RPSFAEIHQ 265
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 82/187 (43%), Gaps = 31/187 (16%)
Query: 318 DGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNI------- 370
+G++L ++ + + ID++R G ++ + ++ NNI
Sbjct: 90 EGSSLYHHLHASETKFEMKKLIDIARQTARG---MDYLHAKSIIHRDLKSNNIFLHEDNT 146
Query: 371 --TGDFGIAKFLKPDSSNWTG------FAGTYGYIAPELAYTMK---ITEKCDVYSFGVL 419
GDFG+A S W+G +G+ ++APE+ + + DVY+FG++
Sbjct: 147 VKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIV 202
Query: 420 VLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKE 479
+ E++ G+ P S+ ++ ++ L P L + +++ +M CLK+
Sbjct: 203 LYELMTGQLP---YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA---ECLKK 256
Query: 480 SPESRPT 486
+ RP+
Sbjct: 257 KRDERPS 263
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG + + GT ++APE+ + + D++S G++V+E+I G+ P
Sbjct: 184 DFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP--- 240
Query: 433 LSSTSSPSLNTDIALDEMLDPRL 455
+ P L + + L PR+
Sbjct: 241 --YFNEPPLQAMRRIRDSLPPRV 261
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 89/246 (36%), Gaps = 36/246 (14%)
Query: 84 GKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQXXXXXXXXXXXXXXXQFSGNIPHEVGLMS 143
++ A +F+ L LDL DN ++ P F G +
Sbjct: 68 ARIDAAAFTGLALLEQLDLSDNAQLRSVDPAT---------------FHG--------LG 104
Query: 144 HLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSF 203
L L++D L P L+++ L L N L + +L ++ LFLH N
Sbjct: 105 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI 164
Query: 204 SGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDNL- 262
S L S+ L L N+ + P + +L L L NNL +L L
Sbjct: 165 SSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLR 224
Query: 263 VLTKLSLDDNHFTSYLPQNICRG----GALQIFTVSENRFQGTIPKSLRNCTSLIRVRLD 318
L L L+DN + CR LQ F S + ++P+ L RL
Sbjct: 225 ALQYLRLNDNPWVC-----DCRARPLWAWLQKFRGSSSEVPCSLPQRL---AGRDLKRLA 276
Query: 319 GNNLTG 324
N+L G
Sbjct: 277 ANDLQG 282
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 4/180 (2%)
Query: 196 LFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSI 255
+FLH N S ++++IL L N + + L L+Q L N S+
Sbjct: 36 IFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSV 95
Query: 256 PPSLDNLV--LTKLSLDDNHFTSYLPQNICRG-GALQIFTVSENRFQGTIPKSLRNCTSL 312
P+ + + L L LD P + RG ALQ + +N Q + R+ +L
Sbjct: 96 DPATFHGLGRLHTLHLDRCGLQELGP-GLFRGLAALQYLYLQDNALQALPDDTFRDLGNL 154
Query: 313 IRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITG 372
+ L GN ++ +AF +L + L +N F + +L L + NN++
Sbjct: 155 THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 214
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 264 LTKLSLDDNHFTSYLPQNICRG-GALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNL 322
LT L L N +S +P+ RG +L + +NR P + R+ L+ + L NNL
Sbjct: 154 LTHLFLHGNRISS-VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNL 212
Query: 323 TGNISKAFGIYPNLTFIDLSRNNFYGEISSN 353
+ ++A L ++ L+ N + + +
Sbjct: 213 SALPTEALAPLRALQYLRLNDNPWVCDCRAR 243
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+A+ L+ D + +T G + +PE K T DV+S+G+++ EV+ G+
Sbjct: 190 DFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P +S N D+ A+DE RLP P C ++ ++ C ++ +RP
Sbjct: 250 PYWEMS-------NQDVIKAVDEGY--RLPPPMDCPA-----ALYQLMLDCWQKDRNNRP 295
Query: 486 TM-KIVS 491
+IVS
Sbjct: 296 KFEQIVS 302
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 89/246 (36%), Gaps = 36/246 (14%)
Query: 84 GKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQXXXXXXXXXXXXXXXQFSGNIPHEVGLMS 143
++ A +F+ L LDL DN ++ P F G +
Sbjct: 69 ARIDAAAFTGLALLEQLDLSDNAQLRSVDPAT---------------FHG--------LG 105
Query: 144 HLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSF 203
L L++D L P L+++ L L N L + +L ++ LFLH N
Sbjct: 106 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI 165
Query: 204 SGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDNL- 262
S L S+ L L N+ + P + +L L L NNL +L L
Sbjct: 166 SSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLR 225
Query: 263 VLTKLSLDDNHFTSYLPQNICRG----GALQIFTVSENRFQGTIPKSLRNCTSLIRVRLD 318
L L L+DN + CR LQ F S + ++P+ L RL
Sbjct: 226 ALQYLRLNDNPWVC-----DCRARPLWAWLQKFRGSSSEVPCSLPQRL---AGRDLKRLA 277
Query: 319 GNNLTG 324
N+L G
Sbjct: 278 ANDLQG 283
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 4/180 (2%)
Query: 196 LFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSI 255
+FLH N S ++++IL L N + + L L+Q L N S+
Sbjct: 37 IFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSV 96
Query: 256 PPSLDNLV--LTKLSLDDNHFTSYLPQNICRG-GALQIFTVSENRFQGTIPKSLRNCTSL 312
P+ + + L L LD P + RG ALQ + +N Q + R+ +L
Sbjct: 97 DPATFHGLGRLHTLHLDRCGLQELGP-GLFRGLAALQYLYLQDNALQALPDDTFRDLGNL 155
Query: 313 IRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITG 372
+ L GN ++ +AF +L + L +N F + +L L + NN++
Sbjct: 156 THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 215
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 264 LTKLSLDDNHFTSYLPQNICRG-GALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNL 322
LT L L N +S +P+ RG +L + +NR P + R+ L+ + L NNL
Sbjct: 155 LTHLFLHGNRISS-VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNL 213
Query: 323 TGNISKAFGIYPNLTFIDLSRNNFYGEISSN 353
+ ++A L ++ L+ N + + +
Sbjct: 214 SALPTEALAPLRALQYLRLNDNPWVCDCRAR 244
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 22/125 (17%)
Query: 373 DFGIAKFLKPDSSNWT--GFAGTYGYIAPELAYTMKITEK-----------CDVYSFGVL 419
DFGIA ++PD+++ GT Y+ PE M + + DV+S G +
Sbjct: 153 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 212
Query: 420 VLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKE 479
+ + GK P + +N L ++DP + + EK + +V CLK
Sbjct: 213 LYYMTYGKTPFQQI-------INQISKLHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKR 263
Query: 480 SPESR 484
P+ R
Sbjct: 264 DPKQR 268
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG + D GT ++APE+ + D++S G++V+E++ G+ P
Sbjct: 184 DFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 22/125 (17%)
Query: 373 DFGIAKFLKPDSSNWT--GFAGTYGYIAPELAYTMKITEK-----------CDVYSFGVL 419
DFGIA ++PD+++ GT Y+ PE M + + DV+S G +
Sbjct: 150 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 209
Query: 420 VLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKE 479
+ + GK P + +N L ++DP + + EK + +V CLK
Sbjct: 210 LYYMTYGKTPFQQI-------INQISKLHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKR 260
Query: 480 SPESR 484
P+ R
Sbjct: 261 DPKQR 265
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+ K + F GT YIAPE+ M D ++ GVL+ E++ G P
Sbjct: 166 ADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP-- 223
Query: 432 FLSSTSSPSLNTDIALDEMLDP 453
+ + L I DE++ P
Sbjct: 224 -FEAENEDDLFEAILNDEVVYP 244
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++ F D GT YIAPE+ K EKCDV+S GV++ ++ G P
Sbjct: 192 DFGLSSFFSKDYK-LRDRLGTAYYIAPEVL-KKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 22/125 (17%)
Query: 373 DFGIAKFLKPDSSNWT--GFAGTYGYIAPELAYTMKITEK-----------CDVYSFGVL 419
DFGIA ++PD+++ GT Y+ PE M + + DV+S G +
Sbjct: 169 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 228
Query: 420 VLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKE 479
+ + GK P + +N L ++DP + + EK + +V CLK
Sbjct: 229 LYYMTYGKTPFQQI-------INQISKLHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKR 279
Query: 480 SPESR 484
P+ R
Sbjct: 280 DPKQR 284
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 22/125 (17%)
Query: 373 DFGIAKFLKPDSSNWT--GFAGTYGYIAPELAYTMKITEK-----------CDVYSFGVL 419
DFGIA ++PD+++ GT Y+ PE M + + DV+S G +
Sbjct: 149 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 208
Query: 420 VLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKE 479
+ + GK P + +N L ++DP + + EK + +V CLK
Sbjct: 209 LYYMTYGKTPFQQI-------INQISKLHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKR 259
Query: 480 SPESR 484
P+ R
Sbjct: 260 DPKQR 264
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Query: 385 SNWTGFAGTYGYIAPELAYTMK---ITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSL 441
+W T Y APEL I E+ DV+S G ++ ++ G+ P D +
Sbjct: 198 QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD--- 254
Query: 442 NTDIALDEMLD-PRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499
+ +A+ L P+ P S ++ + L S+M V P RP + ++ QL P
Sbjct: 255 SVALAVQNQLSIPQSPRHSSALWQLLNSMMTV-------DPHQRPHIPLLLSQLEALQP 306
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K WT GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 185 DFGFAKRVK--GRTWT-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 373 DFGIAKFLKPDSSNWTGFA--GTYGYIAPELAYTMKITEK-----------CDVYSFGVL 419
DFGIA ++PD+++ + GT Y+ PE M + + DV+S G +
Sbjct: 197 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 256
Query: 420 VLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKE 479
+ + GK P + +N L ++DP + + EK + +V CLK
Sbjct: 257 LYYMTYGKTPFQQI-------INQISKLHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKR 307
Query: 480 SPESR 484
P+ R
Sbjct: 308 DPKQR 312
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K WT GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 170 DFGFAKRVK--GRTWT-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 22/125 (17%)
Query: 373 DFGIAKFLKPDSSNWT--GFAGTYGYIAPELAYTMKITEK-----------CDVYSFGVL 419
DFGIA ++PD+++ GT Y+ PE M + + DV+S G +
Sbjct: 197 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 256
Query: 420 VLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKE 479
+ + GK P + +N L ++DP + + EK + +V CLK
Sbjct: 257 LYYMTYGKTPFQQI-------INQISKLHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKR 307
Query: 480 SPESR 484
P+ R
Sbjct: 308 DPKQR 312
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 19/142 (13%)
Query: 367 RNNIT---GDFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVL 421
R+++T DFG++K + G +IA E T K DV++FGV +
Sbjct: 181 RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMW 240
Query: 422 EV-IKGKHPRDFLSSTSSPSLNTDIALDEMLD-PRLPVPSCSVQEKLISIMEVGFSCLKE 479
E+ +G P P + D +L RL P + E + E+ +SC +
Sbjct: 241 EIATRGMTP--------YPGVQNHEMYDYLLHGHRLKQPEDCLDE----LYEIMYSCWRT 288
Query: 480 SPESRPTMKIVSQQLRISAPSL 501
P RPT ++ QL SL
Sbjct: 289 DPLDRPTFSVLRLQLEKLLESL 310
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W AGT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 3/135 (2%)
Query: 142 MSHLKILYIDSNQLDGSIPLEV-GQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHD 200
+ +L+ L++ N+L ++P+ V QL ++ EL L N L P +LT+++ L L
Sbjct: 84 LKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGY 142
Query: 201 NSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLD 260
N L S+ L L NQ + LT LK L N L + D
Sbjct: 143 NELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFD 202
Query: 261 NL-VLTKLSLDDNHF 274
+L L L L +N +
Sbjct: 203 SLEKLKMLQLQENPW 217
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 79/212 (37%), Gaps = 31/212 (14%)
Query: 134 NIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSL-GNLTQ 192
NIP + K L + SN+L S+P + + + L ++N ++P + L
Sbjct: 34 NIPADT------KKLDLQSNKL-SSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKN 86
Query: 193 ISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLY 252
+ L++ DN L +++ L L NQ P +LT L SL YN L
Sbjct: 87 LETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ 146
Query: 253 GSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSL 312
S+P V KL+ +L+ + N+ + + T L
Sbjct: 147 -SLPKG----VFDKLT------------------SLKELRLYNNQLKRVPEGAFDKLTEL 183
Query: 313 IRVRLDGNNLTGNISKAFGIYPNLTFIDLSRN 344
++LD N L AF L + L N
Sbjct: 184 KTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 136 PHEVGLMSHLKILYIDSNQLDGSIPLEV-GQLSSMVELALFSNNLNGSVPHSLGNLTQIS 194
P ++ L L + N+L S+P V +L+S+ EL L++N L + LT++
Sbjct: 126 PRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELK 184
Query: 195 MLFLHDNSFSGFIPPDIGNLKSISILSLAINQF 227
L L +N +L+ + +L L N +
Sbjct: 185 TLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPW 217
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 45/222 (20%)
Query: 288 LQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFY 347
++I V EN + G R C ++ LDG L I + F + +
Sbjct: 88 VRIVDVYENLYAG------RKCLLIVMECLDGGELFSRIQDR----GDQAFTEREAS--- 134
Query: 348 GEISSNFGECPK-LGALNISRNNIT-----------------GDFGIAKFLKPDSSNWTG 389
EI + GE + L ++NI+ ++ DFG AK +S T
Sbjct: 135 -EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 193
Query: 390 FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS---SPSLNTDIA 446
Y Y+APE+ K + CD++S GV++ ++ G P F S+ SP + T I
Sbjct: 194 CYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIR 250
Query: 447 LDEMLDPRLPVPSCS-VQEKLISIMEVGFSCLKESPESRPTM 487
+ + P P S V E++ ++ + LK P R T+
Sbjct: 251 MGQY---EFPNPEWSEVSEEVKMLIR---NLLKTEPTQRMTI 286
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 23/129 (17%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+++ + D+ T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 150 VADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA-- 204
Query: 427 KHPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ SP D + + E+L D R+ P EK+ +M +C + +P
Sbjct: 205 -------TYGMSPYPGIDPSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSD 253
Query: 484 RPTMKIVSQ 492
RP+ + Q
Sbjct: 254 RPSFAEIHQ 262
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 23/139 (16%)
Query: 359 KLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGV 418
K+ +SR G + + L+ WT APE + + + DV+SFG+
Sbjct: 253 KISDFGMSREEADGVYAASGGLRQVPVKWT---------APEALNYGRYSSESDVWSFGI 303
Query: 419 LVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIMEVGFSC 476
L+ E L ++ P+L+ E ++ RLP P + + +ME C
Sbjct: 304 LLWETFS-------LGASPYPNLSNQ-QTREFVEKGGRLPCPEL-CPDAVFRLME---QC 351
Query: 477 LKESPESRPTMKIVSQQLR 495
P RP+ + Q+L+
Sbjct: 352 WAYEPGQRPSFSTIYQELQ 370
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 23/129 (17%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+++ + D+ T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 150 VADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA-- 204
Query: 427 KHPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ SP D + + E+L D R+ P EK+ +M +C + +P
Sbjct: 205 -------TYGMSPYPGIDPSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSD 253
Query: 484 RPTMKIVSQ 492
RP+ + Q
Sbjct: 254 RPSFAEIHQ 262
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L+ ++ T ++APE+ CD++S GVL+ ++ G P
Sbjct: 163 DFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 45/222 (20%)
Query: 288 LQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFY 347
++I V EN + G R C ++ LDG L I + F + +
Sbjct: 124 VRIVDVYENLYAG------RKCLLIVMECLDGGELFSRIQDR----GDQAFTEREAS--- 170
Query: 348 GEISSNFGECPK-LGALNISRNNIT-----------------GDFGIAKFLKPDSSNWTG 389
EI + GE + L ++NI+ ++ DFG AK +S T
Sbjct: 171 -EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 229
Query: 390 FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS---SPSLNTDIA 446
Y Y+APE+ K + CD++S GV++ ++ G P F S+ SP + T I
Sbjct: 230 CYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIR 286
Query: 447 LDEMLDPRLPVPSCS-VQEKLISIMEVGFSCLKESPESRPTM 487
+ + P P S V E++ ++ + LK P R T+
Sbjct: 287 MGQY---EFPNPEWSEVSEEVKMLIR---NLLKTEPTQRMTI 322
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 45/222 (20%)
Query: 288 LQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFY 347
++I V EN + G R C ++ LDG L I + F + +
Sbjct: 80 VRIVDVYENLYAG------RKCLLIVMECLDGGELFSRIQDR----GDQAFTEREAS--- 126
Query: 348 GEISSNFGECPK-LGALNISRNNIT-----------------GDFGIAKFLKPDSSNWTG 389
EI + GE + L ++NI+ ++ DFG AK +S T
Sbjct: 127 -EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 185
Query: 390 FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS---SPSLNTDIA 446
Y Y+APE+ K + CD++S GV++ ++ G P F S+ SP + T I
Sbjct: 186 CYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIR 242
Query: 447 LDEMLDPRLPVPSCS-VQEKLISIMEVGFSCLKESPESRPTM 487
+ + P P S V E++ ++ + LK P R T+
Sbjct: 243 MGQY---EFPNPEWSEVSEEVKMLIR---NLLKTEPTQRMTI 278
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 139 VGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSL-GNLTQISMLF 197
G+ ++ +ILY+ NQ+ P L ++ EL L SN L G++P + +LTQ+++L
Sbjct: 36 AGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLD 94
Query: 198 LHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIP 256
L N + L + L + N+ + +P + LT+L +L N L SIP
Sbjct: 95 LGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQL-KSIP 151
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 180 NGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSL-GNL 238
+ SVP + QI L+LHDN + P +L ++ L L NQ G +P+ + +L
Sbjct: 31 HASVPAGIPTNAQI--LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSL 87
Query: 239 TNLKQFSLVYNNLYGSIPPS--LDNLV-LTKLSLDDNHFTSYLPQNICRGGALQIFTVSE 295
T L L N L ++ PS D LV L +L + N T LP+ I R L + +
Sbjct: 88 TQLTVLDLGTNQL--TVLPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALDQ 144
Query: 296 NRFQGTIPKSLRNCTSLIRVRLDGN 320
N+ + + +SL L GN
Sbjct: 145 NQLKSIPHGAFDRLSSLTHAYLFGN 169
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 23/129 (17%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+++ + D+ +T AG + APE LAY K + K DV++FGVL+ E+
Sbjct: 150 VADFGLSRLMTGDT--FTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA-- 204
Query: 427 KHPRDFLSSTSSPSLNTDIA-LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPES 483
+ SP D + + E+L D R+ P EK+ +M +C + +P
Sbjct: 205 -------TYGMSPYPGIDPSQVYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSD 253
Query: 484 RPTMKIVSQ 492
RP+ + Q
Sbjct: 254 RPSFAEIHQ 262
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 45/222 (20%)
Query: 288 LQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFY 347
++I V EN + G R C ++ LDG L I + F + +
Sbjct: 73 VRIVDVYENLYAG------RKCLLIVMECLDGGELFSRIQDR----GDQAFTEREAS--- 119
Query: 348 GEISSNFGECPK-LGALNISRNNIT-----------------GDFGIAKFLKPDSSNWTG 389
EI + GE + L ++NI+ ++ DFG AK +S T
Sbjct: 120 -EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 178
Query: 390 FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS---SPSLNTDIA 446
Y Y+APE+ K + CD++S GV++ ++ G P F S+ SP + T I
Sbjct: 179 CYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIR 235
Query: 447 LDEMLDPRLPVPSCS-VQEKLISIMEVGFSCLKESPESRPTM 487
+ + P P S V E++ ++ + LK P R T+
Sbjct: 236 MGQY---EFPNPEWSEVSEEVKMLIR---NLLKTEPTQRMTI 271
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 45/222 (20%)
Query: 288 LQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFY 347
++I V EN + G R C ++ LDG L I + F + +
Sbjct: 72 VRIVDVYENLYAG------RKCLLIVMECLDGGELFSRIQDR----GDQAFTEREAS--- 118
Query: 348 GEISSNFGECPK-LGALNISRNNIT-----------------GDFGIAKFLKPDSSNWTG 389
EI + GE + L ++NI+ ++ DFG AK +S T
Sbjct: 119 -EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 177
Query: 390 FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS---SPSLNTDIA 446
Y Y+APE+ K + CD++S GV++ ++ G P F S+ SP + T I
Sbjct: 178 CYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIR 234
Query: 447 LDEMLDPRLPVPSCS-VQEKLISIMEVGFSCLKESPESRPTM 487
+ + P P S V E++ ++ + LK P R T+
Sbjct: 235 MGQY---EFPNPEWSEVSEEVKMLIR---NLLKTEPTQRMTI 270
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 45/222 (20%)
Query: 288 LQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFY 347
++I V EN + G R C ++ LDG L I + F + +
Sbjct: 74 VRIVDVYENLYAG------RKCLLIVMECLDGGELFSRIQDR----GDQAFTEREAS--- 120
Query: 348 GEISSNFGECPK-LGALNISRNNIT-----------------GDFGIAKFLKPDSSNWTG 389
EI + GE + L ++NI+ ++ DFG AK +S T
Sbjct: 121 -EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 179
Query: 390 FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS---SPSLNTDIA 446
Y Y+APE+ K + CD++S GV++ ++ G P F S+ SP + T I
Sbjct: 180 CYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIR 236
Query: 447 LDEMLDPRLPVPSCS-VQEKLISIMEVGFSCLKESPESRPTM 487
+ + P P S V E++ ++ + LK P R T+
Sbjct: 237 MGQY---EFPNPEWSEVSEEVKMLIR---NLLKTEPTQRMTI 272
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 318 DGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNI------- 370
+G++L ++ + + ID++R G ++ + ++ NNI
Sbjct: 106 EGSSLYHHLHIIETKFEMIKLIDIARQTAQG---MDYLHAKSIIHRDLKSNNIFLHEDLT 162
Query: 371 --TGDFGIAKFLKPDSSNWTG------FAGTYGYIAPELAYTMKITEK------CDVYSF 416
GDFG+A + S W+G +G+ ++APE+ +++ +K DVY+F
Sbjct: 163 VKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAF 215
Query: 417 GVLVLEVIKGKHP 429
G+++ E++ G+ P
Sbjct: 216 GIVLYELMTGQLP 228
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 45/222 (20%)
Query: 288 LQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFY 347
++I V EN + G R C ++ LDG L I + F + +
Sbjct: 74 VRIVDVYENLYAG------RKCLLIVMECLDGGELFSRIQDR----GDQAFTEREAS--- 120
Query: 348 GEISSNFGECPK-LGALNISRNNIT-----------------GDFGIAKFLKPDSSNWTG 389
EI + GE + L ++NI+ ++ DFG AK +S T
Sbjct: 121 -EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 179
Query: 390 FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS---SPSLNTDIA 446
Y Y+APE+ K + CD++S GV++ ++ G P F S+ SP + T I
Sbjct: 180 CYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIR 236
Query: 447 LDEMLDPRLPVPSCS-VQEKLISIMEVGFSCLKESPESRPTM 487
+ + P P S V E++ ++ + LK P R T+
Sbjct: 237 MGQY---EFPNPEWSEVSEEVKMLIR---NLLKTEPTQRMTI 272
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 45/222 (20%)
Query: 288 LQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFY 347
++I V EN + G R C ++ LDG L I + F + +
Sbjct: 78 VRIVDVYENLYAG------RKCLLIVMECLDGGELFSRIQDR----GDQAFTEREAS--- 124
Query: 348 GEISSNFGECPK-LGALNISRNNIT-----------------GDFGIAKFLKPDSSNWTG 389
EI + GE + L ++NI+ ++ DFG AK +S T
Sbjct: 125 -EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 183
Query: 390 FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS---SPSLNTDIA 446
Y Y+APE+ K + CD++S GV++ ++ G P F S+ SP + T I
Sbjct: 184 CYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIR 240
Query: 447 LDEMLDPRLPVPSCS-VQEKLISIMEVGFSCLKESPESRPTM 487
+ + P P S V E++ ++ + LK P R T+
Sbjct: 241 MGQY---EFPNPEWSEVSEEVKMLIR---NLLKTEPTQRMTI 276
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 21/120 (17%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ D + +T G + APE K T DV+S+G+++ EV+ G+
Sbjct: 159 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 218
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P +S N D+ A++E RLP P C I++ ++ C ++ RP
Sbjct: 219 PYWDMS-------NQDVIKAIEEGY--RLPPPMDCP-----IALHQLMLDCWQKERSDRP 264
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 45/222 (20%)
Query: 288 LQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFY 347
++I V EN + G R C ++ LDG L I + F + +
Sbjct: 79 VRIVDVYENLYAG------RKCLLIVMECLDGGELFSRIQDR----GDQAFTEREAS--- 125
Query: 348 GEISSNFGECPK-LGALNISRNNIT-----------------GDFGIAKFLKPDSSNWTG 389
EI + GE + L ++NI+ ++ DFG AK +S T
Sbjct: 126 -EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 184
Query: 390 FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS---SPSLNTDIA 446
Y Y+APE+ K + CD++S GV++ ++ G P F S+ SP + T I
Sbjct: 185 CYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIR 241
Query: 447 LDEMLDPRLPVPSCS-VQEKLISIMEVGFSCLKESPESRPTM 487
+ + P P S V E++ ++ + LK P R T+
Sbjct: 242 MGQY---EFPNPEWSEVSEEVKMLIR---NLLKTEPTQRMTI 277
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 31/118 (26%)
Query: 333 YPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNI---------TGDFGIAKFLKPD 383
+ + ID++R G ++ + ++ NNI GDFG+A +
Sbjct: 129 FEMIKLIDIARQTAQG---MDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA----TE 181
Query: 384 SSNWTG------FAGTYGYIAPELAYTMKITEK------CDVYSFGVLVLEVIKGKHP 429
S W+G +G+ ++APE+ +++ +K DVY+FG+++ E++ G+ P
Sbjct: 182 KSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 145 LKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFS 204
+K+L + +N++ SIP +V L ++ EL + SN L LT + ++LHDN +
Sbjct: 452 VKVLDLHNNRI-MSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWD 510
Query: 205 GFIPPDIGNLKSISILSLAINQFSGPIPLSLGNL 238
P I LS IN+ SG + S G++
Sbjct: 511 CTCP-------GIRYLSEWINKHSGVVRNSAGSV 537
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Query: 142 MSHLKILYIDSNQLDG-SIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHD 200
MS L+ L + N L+ + S++ L L SN L GSV L ++ +L LH+
Sbjct: 402 MSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHN 459
Query: 201 NSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLD 260
N IP D+ +L+++ L++A NQ LT+L Q+ +++N + P +
Sbjct: 460 NRIMS-IPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSL-QYIWLHDNPWDCTCPGIR 517
Query: 261 NL 262
L
Sbjct: 518 YL 519
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH 428
GDFGIA+ L GT Y++PE+ K D+++ G ++ E+ KH
Sbjct: 167 GDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH 223
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 21/120 (17%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ D + +T G + APE K T DV+S+G+++ EV+ G+
Sbjct: 153 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 212
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P +S N D+ A++E RLP P C I++ ++ C ++ RP
Sbjct: 213 PYWDMS-------NQDVIKAIEEGY--RLPPPMDCP-----IALHQLMLDCWQKERSDRP 258
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ TG+ T Y APE+ M + D++S G ++ E+++GK
Sbjct: 174 DFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 318 DGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNI------- 370
+G++L ++ + + ID++R G ++ + ++ NNI
Sbjct: 86 EGSSLYHHLHIIETKFEMIKLIDIARQTAQG---MDYLHAKSIIHRDLKSNNIFLHEDLT 142
Query: 371 --TGDFGIAKFLKPDSSNWTG------FAGTYGYIAPELAYTMKITEK------CDVYSF 416
GDFG+A + S W+G +G+ ++APE+ +++ +K DVY+F
Sbjct: 143 VKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAF 195
Query: 417 GVLVLEVIKGKHP 429
G+++ E++ G+ P
Sbjct: 196 GIVLYELMTGQLP 208
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ TG+ T Y APE+ M + D++S G ++ E+++GK
Sbjct: 166 DFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 21/120 (17%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ D + +T G + APE K T DV+S+G+++ EV+ G+
Sbjct: 174 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 233
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P +S N D+ A++E RLP P C I++ ++ C ++ RP
Sbjct: 234 PYWDMS-------NQDVIKAIEEGY--RLPPPMDCP-----IALHQLMLDCWQKERSDRP 279
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ TG+ T Y APE+ M + D++S G ++ E+++GK
Sbjct: 174 DFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 45/222 (20%)
Query: 288 LQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFY 347
++I V EN + G R C ++ LDG L I + F + +
Sbjct: 118 VRIVDVYENLYAG------RKCLLIVMECLDGGELFSRIQDR----GDQAFTEREAS--- 164
Query: 348 GEISSNFGECPK-LGALNISRNNIT-----------------GDFGIAKFLKPDSSNWTG 389
EI + GE + L ++NI+ ++ DFG AK +S T
Sbjct: 165 -EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 223
Query: 390 FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS---SPSLNTDIA 446
Y Y+APE+ K + CD++S GV++ ++ G P F S+ SP + T I
Sbjct: 224 CYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIR 280
Query: 447 LDEMLDPRLPVPSCS-VQEKLISIMEVGFSCLKESPESRPTM 487
+ + P P S V E++ ++ + LK P R T+
Sbjct: 281 MGQY---EFPNPEWSEVSEEVKMLIR---NLLKTEPTQRMTI 316
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ D + +T G + +PE K T DV+S+G+++ EV+ G+
Sbjct: 161 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P +S N D+ A+DE RLP P C ++ ++ C ++ +RP
Sbjct: 221 PYWEMS-------NQDVIKAVDEGY--RLPPPMDCPA-----ALYQLMLDCWQKDRNNRP 266
Query: 486 TM-KIVS 491
+IVS
Sbjct: 267 KFEQIVS 273
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG++ L +N F GT Y++PE + + D++S G+ ++E+ G++P
Sbjct: 167 DFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP--- 221
Query: 433 LSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGF--SCLKESPESRPTMK 488
+ S S +A+ E+LD + P + + S+ F CL ++P R +K
Sbjct: 222 IGSGSG-----SMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 274
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 372 GDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH 428
G+ IA F + SS T GT Y+ PE+ EK D++S GVL E + G
Sbjct: 149 GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMP 208
Query: 429 P 429
P
Sbjct: 209 P 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GK 427
GDFG+ + L + ++ + + APE T + D + FGV + E+ G+
Sbjct: 157 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 216
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P ++ S L+ E RLP P Q+ I V C PE RPT
Sbjct: 217 EP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD----IYNVMVQCWAHKPEDRPTF 266
Query: 488 KIVSQQLRISAPS 500
+ L + P+
Sbjct: 267 VALRDFLLEAQPT 279
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVI-KGKH 428
GDFG++++++ DS+ + G ++APE + T DV+ FGV + E++ G
Sbjct: 181 GDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 239
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P + N D+ RLP+P + L S+M C P RP
Sbjct: 240 PFQGVK-------NNDVIGRIENGERLPMPP-NCPPTLYSLMT---KCWAYDPSRRPRFT 288
Query: 489 IVSQQL 494
+ QL
Sbjct: 289 ELKAQL 294
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 21/120 (17%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ D + +T G + APE K T DV+S+G+++ EV+ G+
Sbjct: 167 DFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGER 226
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P + T N D+ A++E RLP P C ++ ++ C ++ SRP
Sbjct: 227 P--YWEMT-----NQDVIKAVEEGY--RLPSPMDCPA-----ALYQLMLDCWQKERNSRP 272
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ D + +T G + +PE K T DV+S+G+++ EV+ G+
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P +S N D+ A+DE RLP P C ++ ++ C ++ +RP
Sbjct: 250 PYWEMS-------NQDVIKAVDEGY--RLPPPMDCPA-----ALYQLMLDCWQKDRNNRP 295
Query: 486 TM-KIVS 491
+IVS
Sbjct: 296 KFEQIVS 302
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ D + +T G + +PE K T DV+S+G+++ EV+ G+
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P +S N D+ A+DE RLP P C ++ ++ C ++ +RP
Sbjct: 250 PYWEMS-------NQDVIKAVDEGY--RLPPPMDCPA-----ALYQLMLDCWQKDRNNRP 295
Query: 486 TM-KIVS 491
+IVS
Sbjct: 296 KFEQIVS 302
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ D + +T G + +PE K T DV+S+G+++ EV+ G+
Sbjct: 161 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P +S N D+ A+DE RLP P C ++ ++ C ++ +RP
Sbjct: 221 PYWEMS-------NQDVIKAVDEGY--RLPPPMDCPA-----ALYQLMLDCWQKDRNNRP 266
Query: 486 TM-KIVS 491
+IVS
Sbjct: 267 KFEQIVS 273
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 373 DFGIAKFLKPD---SSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG A L+PD S TG GT ++APE+ K DV+S ++L ++ G
Sbjct: 229 DFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGC 288
Query: 428 HP 429
HP
Sbjct: 289 HP 290
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ D + +T G + +PE K T DV+S+G+++ EV+ G+
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P +S N D+ A+DE RLP P C ++ ++ C ++ +RP
Sbjct: 250 PYWEMS-------NQDVIKAVDEGY--RLPPPMDCPA-----ALYQLMLDCWQKDRNNRP 295
Query: 486 TM-KIVS 491
+IVS
Sbjct: 296 KFEQIVS 302
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ D + +T G + +PE K T DV+S+G+++ EV+ G+
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P +S N D+ A+DE RLP P C ++ ++ C ++ +RP
Sbjct: 250 PYWEMS-------NQDVIKAVDEGY--RLPPPMDCPA-----ALYQLMLDCWQKDRNNRP 295
Query: 486 TM-KIVS 491
+IVS
Sbjct: 296 KFEQIVS 302
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 131 FSGNIPHEVGLM---SHLKILYIDSNQLDGSIPLEV-GQLSSMVELALFSNNLNGSVPHS 186
GN H++ + ++L L + NQL S+P V +L+++ EL L N L
Sbjct: 70 LGGNKLHDISALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGV 128
Query: 187 LGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSL 246
LT ++ L+L+ N L +++ L L NQ LT LKQ SL
Sbjct: 129 FDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSL 188
Query: 247 VYNNLYGSIP 256
N L S+P
Sbjct: 189 NDNQL-KSVP 197
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG++ L +N F GT Y++PE + + D++S G+ ++E+ G++P
Sbjct: 148 DFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP--- 202
Query: 433 LSSTSSPSLNTD----IALDEMLDPRLPVPSCSVQEKLISIMEVGF--SCLKESPESRPT 486
P D +A+ E+LD + P + + S+ F CL ++P R
Sbjct: 203 ---IPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERAD 259
Query: 487 MK 488
+K
Sbjct: 260 LK 261
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 84/227 (37%), Gaps = 39/227 (17%)
Query: 88 AFSFSSFPHLAYLDLRDNKLFGTIPPQXXXXXXXXXXXXXXXQFSGNIPHEVGLMSHLKI 147
A +F+ L LDL DN + P F G + HL
Sbjct: 72 AAAFTGLTLLEQLDLSDNAQLRVVDPTT---------------FRG--------LGHLHT 108
Query: 148 LYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFI 207
L++D L P L+++ L L NNL ++ +L ++ LFLH N
Sbjct: 109 LHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVP 168
Query: 208 PPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDNLV---- 263
L S+ L L N + P + +L L L NNL S+ P+ + LV
Sbjct: 169 EHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNL--SMLPA-EVLVPLRS 225
Query: 264 LTKLSLDDNHFTSYLPQNICRG----GALQIFTVSENRFQGTIPKSL 306
L L L+DN + CR LQ F S + +P+ L
Sbjct: 226 LQYLRLNDNPWVC-----DCRARPLWAWLQKFRGSSSEVPCNLPQRL 267
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 74/184 (40%), Gaps = 14/184 (7%)
Query: 196 LFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSI 255
+FLH N S + ++++IL L N +G + LT L+Q L N +
Sbjct: 36 IFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVV 95
Query: 256 PPS-------LDNLVLTKLSLDDNHFTSYLPQNICRG-GALQIFTVSENRFQGTIPKSLR 307
P+ L L L + L + L + RG ALQ + +N Q + R
Sbjct: 96 DPTTFRGLGHLHTLHLDRCGLQE------LGPGLFRGLAALQYLYLQDNNLQALPDNTFR 149
Query: 308 NCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISR 367
+ +L + L GN + AF +L + L +N+ F + +L L +
Sbjct: 150 DLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFA 209
Query: 368 NNIT 371
NN++
Sbjct: 210 NNLS 213
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ D + +T G + +PE K T DV+S+G+++ EV+ G+
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P +S N D+ A+DE RLP P C ++ ++ C ++ +RP
Sbjct: 250 PYWEMS-------NQDVIKAVDEGY--RLPPPMDCPA-----ALYQLMLDCWQKDRNNRP 295
Query: 486 TM-KIVS 491
+IVS
Sbjct: 296 KFEQIVS 302
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ D + +T G + +PE K T DV+S+G+++ EV+ G+
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P +S N D+ A+DE RLP P C ++ ++ C ++ +RP
Sbjct: 250 PYWEMS-------NQDVIKAVDEGY--RLPPPMDCPA-----ALYQLMLDCWQKDRNNRP 295
Query: 486 TM-KIVS 491
+IVS
Sbjct: 296 KFEQIVS 302
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ D + +T G + +PE K T DV+S+G+++ EV+ G+
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P +S N D+ A+DE RLP P C ++ ++ C ++ +RP
Sbjct: 250 PYWEMS-------NQDVIKAVDEGY--RLPPPMDCPA-----ALYQLMLDCWQKDRNNRP 295
Query: 486 TM-KIVS 491
+IVS
Sbjct: 296 KFEQIVS 302
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVI-KGKH 428
GDFG++++++ DS+ + G ++APE + T DV+ FGV + E++ G
Sbjct: 158 GDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 216
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P + N D+ RLP+P + L S+M C P RP
Sbjct: 217 PFQGVK-------NNDVIGRIENGERLPMPP-NCPPTLYSLMT---KCWAYDPSRRPRFT 265
Query: 489 IVSQQL 494
+ QL
Sbjct: 266 ELKAQL 271
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++ + + GT YIAPE+ K EKCDV+S GV++ ++ G P
Sbjct: 182 DFGLSAVFE-NQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GK 427
GDFG+ + L + ++ + + APE T + D + FGV + E+ G+
Sbjct: 153 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 212
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P ++ S L+ E RLP P Q+ I V C PE RPT
Sbjct: 213 EP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD----IYNVMVQCWAHKPEDRPTF 262
Query: 488 KIVSQQLRISAPS 500
+ L + P+
Sbjct: 263 VALRDFLLEAQPT 275
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ D + +T G + +PE K T DV+S+G+++ EV+ G+
Sbjct: 188 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 247
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P +S N D+ A+DE RLP P C ++ ++ C ++ +RP
Sbjct: 248 PYWEMS-------NQDVIKAVDEGY--RLPPPMDCPA-----ALYQLMLDCWQKDRNNRP 293
Query: 486 TM-KIVS 491
+IVS
Sbjct: 294 KFEQIVS 300
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVI-KGKH 428
GDFG++++++ DS+ + G ++APE + T DV+ FGV + E++ G
Sbjct: 156 GDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 214
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P + N D+ RLP+P + L S+M C P RP
Sbjct: 215 PFQGVK-------NNDVIGRIENGERLPMPP-NCPPTLYSLMT---KCWAYDPSRRPRFT 263
Query: 489 IVSQQL 494
+ QL
Sbjct: 264 ELKAQL 269
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ D + +T G + +PE K T DV+S+G+++ EV+ G+
Sbjct: 178 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 237
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P +S N D+ A+DE RLP P C ++ ++ C ++ +RP
Sbjct: 238 PYWEMS-------NQDVIKAVDEGY--RLPPPMDCPA-----ALYQLMLDCWQKDRNNRP 283
Query: 486 TM-KIVS 491
+IVS
Sbjct: 284 KFEQIVS 290
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVI-KGKH 428
GDFG++++++ DS+ + G ++APE + T DV+ FGV + E++ G
Sbjct: 153 GDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 211
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P + N D+ RLP+P + L S+M C P RP
Sbjct: 212 PFQGVK-------NNDVIGRIENGERLPMPP-NCPPTLYSLMT---KCWAYDPSRRPRFT 260
Query: 489 IVSQQL 494
+ QL
Sbjct: 261 ELKAQL 266
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GK 427
GDFG+ + L + ++ + + APE T + D + FGV + E+ G+
Sbjct: 163 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 222
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P ++ S L+ E RLP P Q+ I V C PE RPT
Sbjct: 223 EP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD----IYNVMVQCWAHKPEDRPTF 272
Query: 488 KIVSQQLRISAPS 500
+ L + P+
Sbjct: 273 VALRDFLLEAQPT 285
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ S T + T Y APE+ M E D++S GV++ E+IKG
Sbjct: 169 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG A F D + + T Y APE+ + ++ CDV+S G ++ E G
Sbjct: 199 DFGSATF---DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVI-KGKH 428
GDFG++++++ DS+ + G ++APE + T DV+ FGV + E++ G
Sbjct: 153 GDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 211
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P + N D+ RLP+P + L S+M C P RP
Sbjct: 212 PFQGVK-------NNDVIGRIENGERLPMPP-NCPPTLYSLMT---KCWAYDPSRRPRFT 260
Query: 489 IVSQQL 494
+ QL
Sbjct: 261 ELKAQL 266
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 22/127 (17%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+ + L+ D + +T G + +PE K T DV+S+G+++ EV+ G+
Sbjct: 190 DFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P +S N D+ A+DE RLP P C ++ ++ C ++ +RP
Sbjct: 250 PYWEMS-------NQDVIKAVDEGY--RLPPPMDCPA-----ALYQLMLDCWQKDRNNRP 295
Query: 486 TM-KIVS 491
+IVS
Sbjct: 296 KFEQIVS 302
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Query: 342 SRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPEL 401
SR+ Y +I K G + I+ DFG+ K D + F GT Y+APE+
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKIT------DFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 402 AYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCS 461
D + GV++ E++ G+ P + L I ++E+ PR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSPEAK 233
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GK 427
GDFG+ + L + ++ + + APE T + D + FGV + E+ G+
Sbjct: 153 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 212
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
P ++ S L+ E RLP P Q+ I V C PE RPT
Sbjct: 213 EP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD----IYNVMVQCWAHKPEDRPT 261
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVI-KGKH 428
GDFG++++++ DS+ + G ++APE + T DV+ FGV + E++ G
Sbjct: 155 GDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 213
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P + N D+ RLP+P + L S+M C P RP
Sbjct: 214 PFQGVK-------NNDVIGRIENGERLPMPP-NCPPTLYSLMT---KCWAYDPSRRPRFT 262
Query: 489 IVSQQL 494
+ QL
Sbjct: 263 ELKAQL 268
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ S T + T Y APE+ M E D++S GV++ E+IKG
Sbjct: 169 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GK 427
DFG+A+ + + + +T G + APE T K +V+SFG+L+ E++ GK
Sbjct: 151 ADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGK 208
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLP-VPSCSVQEKLISIMEVGFSCLKESPESRPT 486
P N D+ R+P + +C ++L IM++ C KE E RPT
Sbjct: 209 IP-------YPGRTNADVMSALSQGYRMPRMENCP--DELYDIMKM---CWKEKAEERPT 256
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK L+ ++ T ++APE+ CD++S GVL+ + G P
Sbjct: 163 DFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GK 427
GDFG+ + L + ++ + + APE T + D + FGV + E+ G+
Sbjct: 157 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 216
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
P ++ S L+ E RLP P Q+ I V C PE RPT
Sbjct: 217 EP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD----IYNVMVQCWAHKPEDRPT 265
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 373 DFGIAKFLKPD-SSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ D + +T G + APE K T DV+SFG+++ EV+ G+
Sbjct: 190 DFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGER 249
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P LS+ D RLP P C +I ++ C ++ RP
Sbjct: 250 PYWELSNHEVMKAIND-------GFRLPTPMDCPS-----AIYQLMMQCWQQERARRP 295
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Query: 342 SRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPEL 401
SR+ Y +I K G + I+ DFG+ K D + F GT Y+APE+
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKIT------DFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 402 AYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCS 461
D + GV++ E++ G+ P + L I ++E+ PR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSPEAK 233
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Query: 342 SRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPEL 401
SR+ Y +I K G + I+ DFG+ K D + F GT Y+APE+
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKIT------DFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 402 AYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCS 461
D + GV++ E++ G+ P + L I ++E+ PR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSPEAK 233
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 134 NIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQI 193
NI + L LY++ N L +P E+ LS++ L L N L S+P LG+ Q+
Sbjct: 238 NISANIFKYDFLTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQL 295
Query: 194 SMLFLHDNSFSGFIPPDIGNLKSISILSLAIN 225
+ DN + +P + GNL ++ L + N
Sbjct: 296 KYFYFFDNMVTT-LPWEFGNLCNLQFLGVEGN 326
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVI-KGKH 428
GDFG++++++ DS+ + G ++APE + T DV+ FGV + E++ G
Sbjct: 153 GDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 211
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P + N D+ RLP+P + L S+M C P RP
Sbjct: 212 PFQGVK-------NNDVIGRIENGERLPMPP-NCPPTLYSLMT---KCWAYDPSRRPRFT 260
Query: 489 IVSQQL 494
+ QL
Sbjct: 261 ELKAQL 266
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 371 TGDFGIAKFLKPDSSN--WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GK 427
DFG+A L PD ++ ++A E + K T + DV+S+GV V E++ G
Sbjct: 174 VADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGA 233
Query: 428 HPRDFLSSTSSPSL 441
P L P L
Sbjct: 234 EPYAGLRLAEVPDL 247
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Query: 342 SRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPEL 401
SR+ Y +I K G + I+ DFG+ K D + F GT Y+APE+
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKIT------DFGLCKEGISDGATMKTFCGTPEYLAPEV 176
Query: 402 AYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCS 461
D + GV++ E++ G+ P + L I ++E+ PR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSPEAK 233
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVI-KGKH 428
GDFG++++++ DS+ + G ++APE + T DV+ FGV + E++ G
Sbjct: 150 GDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 208
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P + N D+ RLP+P + L S+M C P RP
Sbjct: 209 PFQGVK-------NNDVIGRIENGERLPMPP-NCPPTLYSLMT---KCWAYDPSRRPRFT 257
Query: 489 IVSQQL 494
+ QL
Sbjct: 258 ELKAQL 263
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Query: 342 SRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPEL 401
SR+ Y +I K G + I+ DFG+ K D + F GT Y+APE+
Sbjct: 128 SRDVVYRDIKLENLMLDKDGHIKIT------DFGLCKEGISDGATMKXFCGTPEYLAPEV 181
Query: 402 AYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCS 461
D + GV++ E++ G+ P + L I ++E+ PR P
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSPEAK 238
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Query: 342 SRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPEL 401
SR+ Y +I K G + I+ DFG+ K D + F GT Y+APE+
Sbjct: 126 SRDVVYRDIKLENLMLDKDGHIKIT------DFGLCKEGISDGATMKTFCGTPEYLAPEV 179
Query: 402 AYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCS 461
D + GV++ E++ G+ P + L I ++E+ PR P
Sbjct: 180 LEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSPEAK 236
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Query: 342 SRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPEL 401
SR+ Y +I K G + I+ DFG+ K D + F GT Y+APE+
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKIT------DFGLCKEGISDGATMKTFCGTPEYLAPEV 176
Query: 402 AYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCS 461
D + GV++ E++ G+ P + L I ++E+ PR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQDHERLFELILMEEIRFPRTLSPEAK 233
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 62/133 (46%), Gaps = 31/133 (23%)
Query: 318 DGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNI------- 370
+G++L ++ + + ID++R G ++ + ++ NNI
Sbjct: 88 EGSSLYHHLHIIETKFEMIKLIDIARQTAQG---MDYLHAKSIIHRDLKSNNIFLHEDLT 144
Query: 371 --TGDFGIAKFLKPDSSNWTG------FAGTYGYIAPELAYTMKITEK------CDVYSF 416
GDFG+A S W+G +G+ ++APE+ +++ +K DVY+F
Sbjct: 145 VKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAF 197
Query: 417 GVLVLEVIKGKHP 429
G+++ E++ G+ P
Sbjct: 198 GIVLYELMTGQLP 210
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVI-KGKH 428
GDFG++++++ DS+ + G ++APE + T DV+ FGV + E++ G
Sbjct: 533 GDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 591
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P + N D+ RLP+P + L S+M C P RP
Sbjct: 592 PFQGVK-------NNDVIGRIENGERLPMPP-NCPPTLYSLMT---KCWAYDPSRRPRFT 640
Query: 489 IVSQQL 494
+ QL
Sbjct: 641 ELKAQL 646
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++ L +N F GT Y+APE + + D++S G+ ++E+ G++P
Sbjct: 158 DFGVSGQLIDSMAN--SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG+AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGLAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 371 TGDFGIAKFLKPDSSN--WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GK 427
DFG+A L PD ++ ++A E + K T + DV+S+GV V E++ G
Sbjct: 156 VADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGA 215
Query: 428 HPRDFLSSTSSPSL 441
P L P L
Sbjct: 216 EPYAGLRLAEVPDL 229
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 37/205 (18%)
Query: 318 DGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNI------- 370
+G++L ++ + + ID++R G ++ + ++ NNI
Sbjct: 91 EGSSLYHHLHIIETKFEMIKLIDIARQTAQG---MDYLHAKSIIHRDLKSNNIFLHEDLT 147
Query: 371 --TGDFGIAKFLKPDSSNWTG------FAGTYGYIAPELAYTMKITEK------CDVYSF 416
GDFG+A S W+G +G+ ++APE+ +++ +K DVY+F
Sbjct: 148 VKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAF 200
Query: 417 GVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSC 476
G+++ E++ G+ P S+ ++ + L P L + + + +M C
Sbjct: 201 GIVLYELMTGQLP---YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA---EC 254
Query: 477 LKESPESRPTMKIVSQQLRISAPSL 501
LK+ + RP + + + A SL
Sbjct: 255 LKKKRDERPLFPQILASIELLARSL 279
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 31/118 (26%)
Query: 333 YPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNI---------TGDFGIAKFLKPD 383
+ + ID++R G ++ + ++ NNI GDFG+A
Sbjct: 128 FEMIKLIDIARQTAQG---MDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV---- 180
Query: 384 SSNWTG------FAGTYGYIAPELAYTMKITEK------CDVYSFGVLVLEVIKGKHP 429
S W+G +G+ ++APE+ +++ +K DVY+FG+++ E++ G+ P
Sbjct: 181 KSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 37/205 (18%)
Query: 318 DGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNI------- 370
+G++L ++ + + ID++R G ++ + ++ NNI
Sbjct: 86 EGSSLYHHLHIIETKFEMIKLIDIARQTAQG---MDYLHAKSIIHRDLKSNNIFLHEDLT 142
Query: 371 --TGDFGIAKFLKPDSSNWTG------FAGTYGYIAPELAYTMKITEK------CDVYSF 416
GDFG+A S W+G +G+ ++APE+ +++ +K DVY+F
Sbjct: 143 VKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAF 195
Query: 417 GVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSC 476
G+++ E++ G+ P S+ ++ + L P L + + + +M C
Sbjct: 196 GIVLYELMTGQLP---YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA---EC 249
Query: 477 LKESPESRPTMKIVSQQLRISAPSL 501
LK+ + RP + + + A SL
Sbjct: 250 LKKKRDERPLFPQILASIELLARSL 274
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 363 LNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLE 422
LN + DFG+A L + GT ++APE+ + D++S G+ +E
Sbjct: 158 LNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIE 217
Query: 423 VIKGKHP 429
+ +GK P
Sbjct: 218 MAEGKPP 224
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVI-KGKH 428
GDFG++++++ DS+ + G ++APE + T DV+ FGV + E++ G
Sbjct: 533 GDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 591
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P + N D+ RLP+P + L S+M C P RP
Sbjct: 592 PFQGVK-------NNDVIGRIENGERLPMPP-NCPPTLYSLMT---KCWAYDPSRRPRFT 640
Query: 489 IVSQQL 494
+ QL
Sbjct: 641 ELKAQL 646
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG+AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGLAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 60/151 (39%), Gaps = 13/151 (8%)
Query: 142 MSHLKILYIDSNQLDGSIPLEVGQLSSMVELALF--SNNLNGSVPHSL-GNLTQISMLFL 198
++ L L +D NQL L G + EL +NN S+P + +LTQ+ L+L
Sbjct: 58 LTKLTWLNLDYNQLQ---TLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114
Query: 199 HDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPS 258
N L + L L NQ + LTNL+ SL N L +
Sbjct: 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGA 174
Query: 259 LDNL-VLTKLSLDDNHF------TSYLPQNI 282
D L L ++L N F T YL Q I
Sbjct: 175 FDRLGKLQTITLFGNQFDCSRCETLYLSQWI 205
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 37/205 (18%)
Query: 318 DGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNI------- 370
+G++L ++ + + ID++R G ++ + ++ NNI
Sbjct: 86 EGSSLYHHLHIIETKFEMIKLIDIARQTAQG---MDYLHAKSIIHRDLKSNNIFLHEDLT 142
Query: 371 --TGDFGIAKFLKPDSSNWTG------FAGTYGYIAPELAYTMKITEK------CDVYSF 416
GDFG+A S W+G +G+ ++APE+ +++ +K DVY+F
Sbjct: 143 VKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAF 195
Query: 417 GVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSC 476
G+++ E++ G+ P S+ ++ + L P L + + + +M C
Sbjct: 196 GIVLYELMTGQLP---YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA---EC 249
Query: 477 LKESPESRPTMKIVSQQLRISAPSL 501
LK+ + RP + + + A SL
Sbjct: 250 LKKKRDERPLFPQILASIELLARSL 274
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG+ K D + F GT Y+APE+ D + GV++ E++ G+ P
Sbjct: 292 DFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--- 348
Query: 433 LSSTSSPSLNTDIALDEMLDPRLPVPSCS 461
+ L I ++E+ PR P
Sbjct: 349 FYNQDHEKLFELILMEEIRFPRTLGPEAK 377
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG+ K D + F GT Y+APE+ D +S G L+ +++ G P F
Sbjct: 164 DFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP--F 221
Query: 433 LSSTSSPSLNTDIALDEMLDPRLPVPSCSVQE 464
N +D++L +L +P QE
Sbjct: 222 TGE------NRKKTIDKILKCKLNLPPYLTQE 247
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 31/118 (26%)
Query: 333 YPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNI---------TGDFGIAKFLKPD 383
+ + ID++R G ++ + ++ NNI GDFG+A
Sbjct: 129 FEMIKLIDIARQTAQG---MDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV---- 181
Query: 384 SSNWTG------FAGTYGYIAPELAYTMKITEK------CDVYSFGVLVLEVIKGKHP 429
S W+G +G+ ++APE+ +++ +K DVY+FG+++ E++ G+ P
Sbjct: 182 KSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 182 VADFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG+ K D + F GT Y+APE+ D + GV++ E++ G+ P
Sbjct: 295 DFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--- 351
Query: 433 LSSTSSPSLNTDIALDEMLDPRLPVPSCS 461
+ L I ++E+ PR P
Sbjct: 352 FYNQDHEKLFELILMEEIRFPRTLGPEAK 380
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG+ K D + F GT Y+APE+ D + GV++ E++ G+ P
Sbjct: 152 DFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--- 208
Query: 433 LSSTSSPSLNTDIALDEMLDPRLPVPSCS 461
+ L I ++E+ PR P
Sbjct: 209 FYNQDHEKLFELILMEEIRFPRTLGPEAK 237
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 53/145 (36%), Gaps = 24/145 (16%)
Query: 338 FIDLSRNNFYGEISSNFGECPKLGALNI--SRNNIT-------------------GDFGI 376
F LSR + E + F + AL+ S N+ DFG+
Sbjct: 97 FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 156
Query: 377 AKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSST 436
K D + F GT Y+APE+ D + GV++ E++ G+ P +
Sbjct: 157 CKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQ 213
Query: 437 SSPSLNTDIALDEMLDPRLPVPSCS 461
L I ++E+ PR P
Sbjct: 214 DHEKLFELILMEEIRFPRTLGPEAK 238
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG+ K D + F GT Y+APE+ D +S G L+ +++ G P F
Sbjct: 164 DFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP--F 221
Query: 433 LSSTSSPSLNTDIALDEMLDPRLPVPSCSVQE 464
N +D++L +L +P QE
Sbjct: 222 TGE------NRKKTIDKILKCKLNLPPYLTQE 247
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 182 VADFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 37/190 (19%)
Query: 333 YPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNI---------TGDFGIAKFLKPD 383
+ + ID++R G ++ + ++ NNI GDFG+A
Sbjct: 106 FEMIKLIDIARQTAQG---MDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV---- 158
Query: 384 SSNWTG------FAGTYGYIAPELAYTMKITEK------CDVYSFGVLVLEVIKGKHPRD 431
S W+G +G+ ++APE+ +++ +K DVY+FG+++ E++ G+ P
Sbjct: 159 KSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-- 213
Query: 432 FLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVS 491
S+ ++ + L P L + + + +M CLK+ + RP +
Sbjct: 214 -YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA---ECLKKKRDERPLFPQIL 269
Query: 492 QQLRISAPSL 501
+ + A SL
Sbjct: 270 ASIELLARSL 279
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 183 VADFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 22/125 (17%)
Query: 373 DFGIAKFLKPDSSNWTGFA--GTYGYIAPELAYTMKITEK-----------CDVYSFGVL 419
DFGIA ++PD+++ + G Y+ PE M + + DV+S G +
Sbjct: 197 DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 256
Query: 420 VLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKE 479
+ + GK P + +N L ++DP + + EK + +V CLK
Sbjct: 257 LYYMTYGKTPFQQI-------INQISKLHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKR 307
Query: 480 SPESR 484
P+ R
Sbjct: 308 DPKQR 312
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 45/222 (20%)
Query: 288 LQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFY 347
++I V EN + G R C ++ LDG L I + F + +
Sbjct: 72 VRIVDVYENLYAG------RKCLLIVMECLDGGELFSRIQDR----GDQAFTEREAS--- 118
Query: 348 GEISSNFGECPK-LGALNISRNNIT-----------------GDFGIAKFLKPDSSNWTG 389
EI + GE + L ++NI+ ++ DFG AK +S T
Sbjct: 119 -EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTE 176
Query: 390 FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS---SPSLNTDIA 446
T Y+APE+ K + CD++S GV++ ++ G P F S+ SP + T I
Sbjct: 177 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP--FYSNHGLAISPGMKTRIR 234
Query: 447 LDEMLDPRLPVPSCS-VQEKLISIMEVGFSCLKESPESRPTM 487
+ + P P S V E++ ++ + LK P R T+
Sbjct: 235 MGQY---EFPNPEWSEVSEEVKMLIR---NLLKTEPTQRMTI 270
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 371 TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 182 VADFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 53/145 (36%), Gaps = 24/145 (16%)
Query: 338 FIDLSRNNFYGEISSNFGECPKLGALNI--SRNNIT-------------------GDFGI 376
F LSR + E + F + AL+ S N+ DFG+
Sbjct: 98 FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 157
Query: 377 AKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSST 436
K D + F GT Y+APE+ D + GV++ E++ G+ P +
Sbjct: 158 CKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP---FYNQ 214
Query: 437 SSPSLNTDIALDEMLDPRLPVPSCS 461
L I ++E+ PR P
Sbjct: 215 DHEKLFELILMEEIRFPRTLGPEAK 239
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG+A+ KP F GT ++APE+ ++ D++S GV+ ++ G P F
Sbjct: 232 DFGLARRYKPREKLKVNF-GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP--F 288
Query: 433 LSSTSSPSLNTDIA 446
L + +LN +A
Sbjct: 289 LGDNDAETLNNILA 302
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG A + D + + T Y APE+ + ++ CDV+S G +++E +
Sbjct: 180 DFGSATY---DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEY--------Y 228
Query: 433 LSSTSSPSLNTDIALDEMLDPRLPVPSCSVQE 464
L T P+ ++ L M P+P +Q+
Sbjct: 229 LGFTVFPTHDSKEHLAMMERILGPLPKHMIQK 260
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 205 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 177 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 205 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 177 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 161 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 221 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 268
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 220 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 267
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 19/136 (13%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI--- 424
DFG+AK L D + G + + Y APE + + DV+SFGV++ E+
Sbjct: 156 ADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFTYC 214
Query: 425 -KGKHP-RDFL----SSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLK 478
K P +FL S P+L+ + RLP P E + E+ C
Sbjct: 215 DKSCSPSAEFLRMMGSERDVPALSR-LLELLEEGQRLPAPPACPAE----VHELMKLCWA 269
Query: 479 ESPESRPTMKIVSQQL 494
SP+ RP+ + QL
Sbjct: 270 PSPQDRPSFSALGPQL 285
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 185 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 166 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 225
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 226 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 273
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 185 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 185 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 162 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 222 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 269
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 185 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 163 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 223 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 270
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 185 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 157 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 216
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 217 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 264
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 185 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 167 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 227 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 274
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 161 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 221 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 268
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 167 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 227 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 274
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 185 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 185 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 185 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 162 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 222 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 269
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 55/149 (36%), Gaps = 19/149 (12%)
Query: 357 CPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVY 414
CP G R GDFG+A+ + S G ++ PE T K D +
Sbjct: 190 CPGPG-----RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 415 SFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVG 473
SFGVL+ E+ G P S S+ + + +DP P + +
Sbjct: 245 SFGVLLWEIFSLGYMP---YPSKSNQEVLEFVTSGGRMDPPKNCPG--------PVYRIM 293
Query: 474 FSCLKESPESRPTMKIVSQQLRISAPSLD 502
C + PE RP I+ +++ D
Sbjct: 294 TQCWQHQPEDRPNFAIILERIEYCTQDPD 322
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT----YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426
GDFG+++ + S+++ G ++ PE K T + DV+SFGV++ E+ G
Sbjct: 175 GDFGMSRDVY--STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYG 232
Query: 427 KHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
K P LS+T T + E PR+ C + + +V C + P+ R
Sbjct: 233 KQPWFQLSNTEVIECITQGRVLE--RPRV----CPKE-----VYDVMLGCWQREPQQRLN 281
Query: 487 MKIVSQQL 494
+K + + L
Sbjct: 282 IKEIYKIL 289
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 220 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 267
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 185 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 220 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 267
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 163 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 223 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 270
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 167 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 227 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 274
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 154 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 213
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 214 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 261
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 171 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 163 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 223 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 270
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 373 DFGIAKFLKPDSSN---WTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG A L+PD TG GT ++APE+ K DV+S ++L ++ G
Sbjct: 210 DFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGC 269
Query: 428 HP 429
HP
Sbjct: 270 HP 271
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 55/149 (36%), Gaps = 19/149 (12%)
Query: 357 CPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVY 414
CP G R GDFG+A+ + S G ++ PE T K D +
Sbjct: 190 CPGPG-----RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 415 SFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVG 473
SFGVL+ E+ G P S S+ + + +DP P + +
Sbjct: 245 SFGVLLWEIFSLGYMP---YPSKSNQEVLEFVTSGGRMDPPKNCPG--------PVYRIM 293
Query: 474 FSCLKESPESRPTMKIVSQQLRISAPSLD 502
C + PE RP I+ +++ D
Sbjct: 294 TQCWQHQPEDRPNFAIILERIEYCTQDPD 322
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 164 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 224 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 271
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 23/139 (16%)
Query: 359 KLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGV 418
K+ +SR G + L+ WT APE + + + DV+SFG+
Sbjct: 253 KISDFGMSREEADGVXAASGGLRQVPVKWT---------APEALNYGRYSSESDVWSFGI 303
Query: 419 LVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIMEVGFSC 476
L+ E L ++ P+L+ E ++ RLP P + + +ME C
Sbjct: 304 LLWETFS-------LGASPYPNLSNQ-QTREFVEKGGRLPCPEL-CPDAVFRLME---QC 351
Query: 477 LKESPESRPTMKIVSQQLR 495
P RP+ + Q+L+
Sbjct: 352 WAYEPGQRPSFSTIYQELQ 370
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ E+ G P
Sbjct: 179 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 7/137 (5%)
Query: 142 MSHLKILYIDSNQLDGSIPLEVGQLSSMVELALF--SNNLNGSVPHSL-GNLTQISMLFL 198
++ L L +D NQL L G + EL +NN S+P + +LTQ+ L+L
Sbjct: 58 LTKLTWLNLDYNQLQ---TLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114
Query: 199 HDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPS 258
N L + L L NQ + LTNL+ SL N L +
Sbjct: 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGA 174
Query: 259 LDNL-VLTKLSLDDNHF 274
D L L ++L N F
Sbjct: 175 FDRLGKLQTITLFGNQF 191
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 19/142 (13%)
Query: 357 CPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVY 414
CP G R GDFG+A+ + S G ++ PE T K D +
Sbjct: 190 CPGPG-----RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 415 SFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVG 473
SFGVL+ E+ G P S S+ + + +DP P + +
Sbjct: 245 SFGVLLWEIFSLGYMP---YPSKSNQEVLEFVTSGGRMDPPKNCPG--------PVYRIM 293
Query: 474 FSCLKESPESRPTMKIVSQQLR 495
C + PE RP I+ +++
Sbjct: 294 TQCWQHQPEDRPNFAIILERIE 315
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 220 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 267
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 373 DFGIAKFLKPD---SSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG A L+PD S TG GT ++APE+ K D++S ++L ++ G
Sbjct: 194 DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253
Query: 428 HP 429
HP
Sbjct: 254 HP 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 373 DFGIAKFLKPD---SSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG A L+PD S TG GT ++APE+ K D++S ++L ++ G
Sbjct: 210 DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 269
Query: 428 HP 429
HP
Sbjct: 270 HP 271
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 185 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 244
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 245 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 292
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 19/142 (13%)
Query: 357 CPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVY 414
CP G R GDFG+A+ + S G ++ PE T K D +
Sbjct: 176 CPGPG-----RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 415 SFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVG 473
SFGVL+ E+ G P S S+ + + +DP P + +
Sbjct: 231 SFGVLLWEIFSLGYMP---YPSKSNQEVLEFVTSGGRMDPPKNCPG--------PVYRIM 279
Query: 474 FSCLKESPESRPTMKIVSQQLR 495
C + PE RP I+ +++
Sbjct: 280 TQCWQHQPEDRPNFAIILERIE 301
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 19/142 (13%)
Query: 357 CPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVY 414
CP G R GDFG+A+ + S G ++ PE T K D +
Sbjct: 167 CPGPG-----RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 221
Query: 415 SFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVG 473
SFGVL+ E+ G P S S+ + + +DP P + +
Sbjct: 222 SFGVLLWEIFSLGYMP---YPSKSNQEVLEFVTSGGRMDPPKNCPG--------PVYRIM 270
Query: 474 FSCLKESPESRPTMKIVSQQLR 495
C + PE RP I+ +++
Sbjct: 271 TQCWQHQPEDRPNFAIILERIE 292
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 19/142 (13%)
Query: 357 CPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVY 414
CP G R GDFG+A+ + S G ++ PE T K D +
Sbjct: 182 CPGPG-----RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 236
Query: 415 SFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVG 473
SFGVL+ E+ G P S S+ + + +DP P + +
Sbjct: 237 SFGVLLWEIFSLGYMP---YPSKSNQEVLEFVTSGGRMDPPKNCPG--------PVYRIM 285
Query: 474 FSCLKESPESRPTMKIVSQQLR 495
C + PE RP I+ +++
Sbjct: 286 TQCWQHQPEDRPNFAIILERIE 307
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 26/140 (18%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGT------YGYIAPELAYTMKITEKCDVYSF 416
++ NN+ DFG+A+ D +N + T ++APE + T + DV+SF
Sbjct: 190 VTENNVMKIADFGLAR----DINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 417 GVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIMEVGF 474
GVL+ E+ L + P + + L ++L R+ P+ E L +M
Sbjct: 246 GVLMWEIFT-------LGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNE-LYMMMR--- 293
Query: 475 SCLKESPESRPTMKIVSQQL 494
C P RPT K + + L
Sbjct: 294 DCWHAVPSQRPTFKQLVEDL 313
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 373 DFGIAKFLKPD---SSNWTG--FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG A L+PD S TG GT ++APE+ K D++S ++L ++ G
Sbjct: 208 DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 267
Query: 428 HP 429
HP
Sbjct: 268 HP 269
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 19/142 (13%)
Query: 357 CPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVY 414
CP G R GDFG+A+ + S G ++ PE T K D +
Sbjct: 175 CPGPG-----RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229
Query: 415 SFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVG 473
SFGVL+ E+ G P S S+ + + +DP P + +
Sbjct: 230 SFGVLLWEIFSLGYMP---YPSKSNQEVLEFVTSGGRMDPPKNCPG--------PVYRIM 278
Query: 474 FSCLKESPESRPTMKIVSQQLR 495
C + PE RP I+ +++
Sbjct: 279 TQCWQHQPEDRPNFAIILERIE 300
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 139 VGLMSHLKILYIDSNQLDGSIPLEV-GQLSSMVELALFSNNLNGSVPHSLGNLTQISMLF 197
G+ S L ++SN+L S+P V +L+ + +L+L N + LT++++L+
Sbjct: 24 TGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILY 82
Query: 198 LHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPP 257
LH+N L + L+L NQ LT+L++ L + N + P
Sbjct: 83 LHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWL-HTNPWDCSCP 141
Query: 258 SLDNL 262
+D L
Sbjct: 142 RIDYL 146
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 194 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 253
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 254 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 301
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 19/142 (13%)
Query: 357 CPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVY 414
CP G R GDFG+A+ + S G ++ PE T K D +
Sbjct: 175 CPGPG-----RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229
Query: 415 SFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVG 473
SFGVL+ E+ G P S S+ + + +DP P + +
Sbjct: 230 SFGVLLWEIFSLGYMP---YPSKSNQEVLEFVTSGGRMDPPKNCPG--------PVYRIM 278
Query: 474 FSCLKESPESRPTMKIVSQQLR 495
C + PE RP I+ +++
Sbjct: 279 TQCWQHQPEDRPNFAIILERIE 300
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 19/142 (13%)
Query: 357 CPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVY 414
CP G R GDFG+A+ + S G ++ PE T K D +
Sbjct: 176 CPGPG-----RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 415 SFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVG 473
SFGVL+ E+ G P S S+ + + +DP P + +
Sbjct: 231 SFGVLLWEIFSLGYMP---YPSKSNQEVLEFVTSGGRMDPPKNCPG--------PVYRIM 279
Query: 474 FSCLKESPESRPTMKIVSQQLR 495
C + PE RP I+ +++
Sbjct: 280 TQCWQHQPEDRPNFAIILERIE 301
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 15/126 (11%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVI-KGKH 428
GDFG++++++ DS+ G ++APE + T DV+ FGV + E++ G
Sbjct: 153 GDFGLSRYME-DSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 211
Query: 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK 488
P + N D+ RLP+P + L S+M C P RP
Sbjct: 212 PFQGVK-------NNDVIGRIENGERLPMPP-NCPPTLYSLMT---KCWAYDPSRRPRFT 260
Query: 489 IVSQQL 494
+ QL
Sbjct: 261 ELKAQL 266
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 19/141 (13%)
Query: 357 CPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVY 414
CP G R GDFG+A+ + S G ++ PE T K D +
Sbjct: 202 CPGPG-----RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 256
Query: 415 SFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVG 473
SFGVL+ E+ G P S S+ + + +DP P + +
Sbjct: 257 SFGVLLWEIFSLGYMP---YPSKSNQEVLEFVTSGGRMDPPKNCPG--------PVYRIM 305
Query: 474 FSCLKESPESRPTMKIVSQQL 494
C + PE RP I+ +++
Sbjct: 306 TQCWQHQPEDRPNFAIILERI 326
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 26/140 (18%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGT------YGYIAPELAYTMKITEKCDVYSF 416
++ NN+ DFG+A+ D +N + T ++APE + T + DV+SF
Sbjct: 190 VTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 417 GVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIMEVGF 474
GVL+ E+ L + P + + L ++L R+ P+ E L +M
Sbjct: 246 GVLMWEIFT-------LGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNE-LYMMMR--- 293
Query: 475 SCLKESPESRPTMKIVSQQL 494
C P RPT K + + L
Sbjct: 294 DCWHAVPSQRPTFKQLVEDL 313
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 26/140 (18%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGT------YGYIAPELAYTMKITEKCDVYSF 416
++ NN+ DFG+A+ D +N + T ++APE + T + DV+SF
Sbjct: 190 VTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 417 GVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIMEVGF 474
GVL+ E+ L + P + + L ++L R+ P+ E L +M
Sbjct: 246 GVLMWEIFT-------LGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNE-LYMMMR--- 293
Query: 475 SCLKESPESRPTMKIVSQQL 494
C P RPT K + + L
Sbjct: 294 DCWHAVPSQRPTFKQLVEDL 313
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 26/140 (18%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGT------YGYIAPELAYTMKITEKCDVYSF 416
++ NN+ DFG+A+ D +N + T ++APE + T + DV+SF
Sbjct: 190 VTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 417 GVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIMEVGF 474
GVL+ E+ L + P + + L ++L R+ P+ E L +M
Sbjct: 246 GVLMWEIFT-------LGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNE-LYMMMR--- 293
Query: 475 SCLKESPESRPTMKIVSQQL 494
C P RPT K + + L
Sbjct: 294 DCWHAVPSQRPTFKQLVEDL 313
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 26/140 (18%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGT------YGYIAPELAYTMKITEKCDVYSF 416
++ NN+ DFG+A+ D +N + T ++APE + T + DV+SF
Sbjct: 190 VTENNVMRIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 417 GVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIMEVGF 474
GVL+ E+ L + P + + L ++L R+ P+ E L +M
Sbjct: 246 GVLMWEIFT-------LGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNE-LYMMMR--- 293
Query: 475 SCLKESPESRPTMKIVSQQL 494
C P RPT K + + L
Sbjct: 294 DCWHAVPSQRPTFKQLVEDL 313
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 19/142 (13%)
Query: 357 CPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVY 414
CP G R GDFG+A+ + S G ++ PE T K D +
Sbjct: 192 CPGPG-----RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 246
Query: 415 SFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVG 473
SFGVL+ E+ G P S S+ + + +DP P + +
Sbjct: 247 SFGVLLWEIFSLGYMP---YPSKSNQEVLEFVTSGGRMDPPKNCPG--------PVYRIM 295
Query: 474 FSCLKESPESRPTMKIVSQQLR 495
C + PE RP I+ +++
Sbjct: 296 TQCWQHQPEDRPNFAIILERIE 317
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 26/140 (18%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGT------YGYIAPELAYTMKITEKCDVYSF 416
++ NN+ DFG+A+ D +N + T ++APE + T + DV+SF
Sbjct: 177 VTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 232
Query: 417 GVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIMEVGF 474
GVL+ E+ L + P + + L ++L R+ P+ E L +M
Sbjct: 233 GVLMWEIFT-------LGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNE-LYMMMR--- 280
Query: 475 SCLKESPESRPTMKIVSQQL 494
C P RPT K + + L
Sbjct: 281 DCWHAVPSQRPTFKQLVEDL 300
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 26/140 (18%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGT------YGYIAPELAYTMKITEKCDVYSF 416
++ NN+ DFG+A+ D +N + T ++APE + T + DV+SF
Sbjct: 190 VTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 417 GVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIMEVGF 474
GVL+ E+ L + P + + L ++L R+ P+ E L +M
Sbjct: 246 GVLMWEIFT-------LGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNE-LYMMMR--- 293
Query: 475 SCLKESPESRPTMKIVSQQL 494
C P RPT K + + L
Sbjct: 294 DCWHAVPSQRPTFKQLVEDL 313
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 14/89 (15%)
Query: 373 DFGIAK-FLKPDSSNWTGF---AGTYGYIAPELAYTMKITE--KCDVYSFGVLVLEVIKG 426
DFG++K F K ++ + G AGT ++APE+ T + KCD +S GVL+ ++ G
Sbjct: 213 DFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG 272
Query: 427 KHPRDFLSSTSSPSLNTDIALDEMLDPRL 455
P P +N + ++L+ +L
Sbjct: 273 AVP--------FPGVNDADTISQVLNKKL 293
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 19/142 (13%)
Query: 357 CPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVY 414
CP G R GDFG+A+ + S G ++ PE T K D +
Sbjct: 176 CPGPG-----RVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 415 SFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVG 473
SFGVL+ E+ G P S S+ + + +DP P + +
Sbjct: 231 SFGVLLWEIFSLGYMP---YPSKSNQEVLEFVTSGGRMDPPKNCPG--------PVYRIM 279
Query: 474 FSCLKESPESRPTMKIVSQQLR 495
C + PE RP I+ +++
Sbjct: 280 TQCWQHQPEDRPNFAIILERIE 301
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 18/99 (18%)
Query: 396 YIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTD-IALDEMLDP- 453
+ A E T + T K DV+SFGVL+ E+ L+ + P + D L L
Sbjct: 194 WTALESLQTYRFTTKSDVWSFGVLLWEL---------LTRGAPPYRHIDPFDLTHFLAQG 244
Query: 454 -RLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMKIV 490
RLP P C + L +M+ C + P RPT +++
Sbjct: 245 RRLPQPEYCP--DSLYQVMQ---QCWEADPAVRPTFRVL 278
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 26/140 (18%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGT------YGYIAPELAYTMKITEKCDVYSF 416
++ NN+ DFG+A+ D +N + T ++APE + T + DV+SF
Sbjct: 190 VTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 417 GVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIMEVGF 474
GVL+ E+ L + P + + L ++L R+ P+ E L +M
Sbjct: 246 GVLMWEIFT-------LGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNE-LYMMMR--- 293
Query: 475 SCLKESPESRPTMKIVSQQL 494
C P RPT K + + L
Sbjct: 294 DCWHAVPSQRPTFKQLVEDL 313
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 20/143 (13%)
Query: 360 LGALNI----SRNNITGDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDV 413
L A NI R DFG+++ + + S G ++A E + T + DV
Sbjct: 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDV 235
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEM-LDPRLPVP-SCSVQEKLISIME 471
+SFGVL+ E++ L P + + + + R+ P +CS E++ +M
Sbjct: 236 WSFGVLLWEIVT-------LGGNPYPGIPPERLFNLLKTGHRMERPDNCS--EEMYRLM- 285
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C K+ P+ RP +S+ L
Sbjct: 286 --LQCWKQEPDKRPVFADISKDL 306
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 26/140 (18%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGT------YGYIAPELAYTMKITEKCDVYSF 416
++ NN+ DFG+A+ D +N + T ++APE + T + DV+SF
Sbjct: 182 VTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 237
Query: 417 GVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIMEVGF 474
GVL+ E+ L + P + + L ++L R+ P+ E L +M
Sbjct: 238 GVLMWEIFT-------LGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNE-LYMMMR--- 285
Query: 475 SCLKESPESRPTMKIVSQQL 494
C P RPT K + + L
Sbjct: 286 DCWHAVPSQRPTFKQLVEDL 305
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI 424
GDFG+ LK D T GT Y++PE + ++ D+Y+ G+++ E++
Sbjct: 178 GDFGLVTSLKNDGKR-TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 26/140 (18%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGT------YGYIAPELAYTMKITEKCDVYSF 416
++ NN+ DFG+A+ D +N + T ++APE + T + DV+SF
Sbjct: 179 VTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 234
Query: 417 GVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIMEVGF 474
GVL+ E+ L + P + + L ++L R+ P+ E L +M
Sbjct: 235 GVLMWEIFT-------LGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNE-LYMMMR--- 282
Query: 475 SCLKESPESRPTMKIVSQQL 494
C P RPT K + + L
Sbjct: 283 DCWHAVPSQRPTFKQLVEDL 302
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 18/102 (17%)
Query: 343 RNNFYG-EISSNFGECPKLGALNISRNN--------------ITGDFGIAKFLKPDSSNW 387
R FY EI+S G L +LNI + + DFG+ K +S
Sbjct: 140 RARFYAAEIASALG---YLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT 196
Query: 388 TGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
+ F GT Y+APE+ + D + G ++ E++ G P
Sbjct: 197 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 20/143 (13%)
Query: 360 LGALNI----SRNNITGDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDV 413
L A NI R DFG+++ + + S G ++A E + T + DV
Sbjct: 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDV 235
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEM-LDPRLPVP-SCSVQEKLISIME 471
+SFGVL+ E++ L P + + + + R+ P +CS E++ +M
Sbjct: 236 WSFGVLLWEIVT-------LGGNPYPGIPPERLFNLLKTGHRMERPDNCS--EEMYRLM- 285
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C K+ P+ RP +S+ L
Sbjct: 286 --LQCWKQEPDKRPVFADISKDL 306
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 373 DFGIAKFLKPDSS---NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ ++ D TG + APE K T DV+S+G+++ EV+ G+
Sbjct: 188 DFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER 247
Query: 429 PRDFLSSTSSPSLNTDI--ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRP 485
P +S N D+ A++E RLP P C + ++ C ++ RP
Sbjct: 248 PYWDMS-------NQDVIKAIEEGY--RLPAPMDCPA-----GLHQLMLDCWQKERAERP 293
Query: 486 TMK 488
+
Sbjct: 294 KFE 296
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 14/133 (10%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GK 427
GDFG+ + L + + + + APE T + D + FGV + E+ G+
Sbjct: 153 GDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 212
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P ++ S L+ E RLP P Q+ I V C PE RPT
Sbjct: 213 EP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD----IYNVMVQCWAHKPEDRPTF 262
Query: 488 KIVSQQLRISAPS 500
+ L + P+
Sbjct: 263 VALRDFLLEAQPT 275
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 56/141 (39%), Gaps = 29/141 (20%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+AK L D + G + + Y APE + + DV+SFGV++ E+
Sbjct: 169 ADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFT-- 225
Query: 428 HPRDFLSSTSSPS--------LNTDI-ALDE-----MLDPRLPVPSCSVQEKLISIMEVG 473
+ + SPS D+ AL RLP P E + E+
Sbjct: 226 ----YCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAE----VHELM 277
Query: 474 FSCLKESPESRPTMKIVSQQL 494
C SP+ RP+ + QL
Sbjct: 278 KLCWAPSPQDRPSFSALGPQL 298
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 373 DFGIAKFLKPD---SSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ D + TG + APE + DV+SFGV++ EV+ G+
Sbjct: 194 DFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253
Query: 429 P------RDFLSSTSS 438
P RD +SS
Sbjct: 254 PYWNMTNRDVISSVEE 269
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++ L +N F GT Y++PE + + D++S G+ ++E+ G++P
Sbjct: 210 DFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 14/133 (10%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT---YGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GK 427
GDFG+ + L + + + + APE T + D + FGV + E+ G+
Sbjct: 163 GDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 222
Query: 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487
P ++ S L+ E RLP P Q+ I V C PE RPT
Sbjct: 223 EP--WIGLNGSQILHKIDKEGE----RLPRPEDCPQD----IYNVMVQCWAHKPEDRPTF 272
Query: 488 KIVSQQLRISAPS 500
+ L + P+
Sbjct: 273 VALRDFLLEAQPT 285
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++ L +N F GT Y++PE + + D++S G+ ++E+ G++P
Sbjct: 148 DFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 372 GDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH 428
G+ IA F + SS GT Y+ PE+ EK D++S GVL E + G
Sbjct: 149 GELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMP 208
Query: 429 P 429
P
Sbjct: 209 P 209
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 115/251 (45%), Gaps = 24/251 (9%)
Query: 142 MSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSN-NLNGSVPHSLGNLTQISMLFLHD 200
+++L+ LY++ + + PL L+ L L +N NL+ P L N T ++ L + +
Sbjct: 109 LTNLRELYLNEDNISDISPL--ANLTKXYSLNLGANHNLSDLSP--LSNXTGLNYLTVTE 164
Query: 201 NSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLD 260
+ P I NL + LSL NQ PL+ +LT+L F+ Y N I P +
Sbjct: 165 SKVKDVTP--IANLTDLYSLSLNYNQIEDISPLA--SLTSLHYFT-AYVNQITDITPVAN 219
Query: 261 NLVLTKLSLDDNHFTSYLP-QNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDG 319
L L + +N T P N+ + L+I T Q + ++++ T L + + G
Sbjct: 220 XTRLNSLKIGNNKITDLSPLANLSQLTWLEIGT-----NQISDINAVKDLTKLKXLNV-G 273
Query: 320 NNLTGNISKAFGIYPNLTFID---LSRNNFYGEISSNFGECPKLGALNISRNNITGDFGI 376
+N +IS + NL+ ++ L+ N E G L L +S+N+IT +
Sbjct: 274 SNQISDIS----VLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRPL 329
Query: 377 AKFLKPDSSNW 387
A K DS+++
Sbjct: 330 ASLSKXDSADF 340
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 20/232 (8%)
Query: 142 MSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDN 201
+++L+ L ++ NQ+ PL L + L + +N + +L NLT + L+L+++
Sbjct: 65 LTNLEYLNLNGNQITDISPL--SNLVKLTNLYIGTNKITD--ISALQNLTNLRELYLNED 120
Query: 202 SFSGFIPPDIGNLKSISILSLAINQ-FSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLD 260
+ S P + NL L+L N S PLS N T L ++ + + P +
Sbjct: 121 NISDISP--LANLTKXYSLNLGANHNLSDLSPLS--NXTGLNYLTVTESKVKDVTP--IA 174
Query: 261 NLV-LTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDG 319
NL L LSL+ N P + +L FT N+ P + N T L +++ G
Sbjct: 175 NLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANXTRLNSLKI-G 229
Query: 320 NNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNIT 371
NN ++S + LT++++ N +I++ + KL LN+ N I+
Sbjct: 230 NNKITDLSPLANL-SQLTWLEIGTNQI-SDINA-VKDLTKLKXLNVGSNQIS 278
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 373 DFGIAKFLK--PDSS-NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKH 428
DFG+++ L+ PD++ TG + APE + DV+SFGV++ EV+ G+
Sbjct: 194 DFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253
Query: 429 P------RDFLSSTSS 438
P RD +SS
Sbjct: 254 PYWNMTNRDVISSVEE 269
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 360 LGALNI--SRNNIT--GDFGIAKFLKPDSSNWTGFAGT------YGYIAPELAYTMKITE 409
L A N+ + NN+ DFG+A+ D +N + T ++APE + T
Sbjct: 229 LAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 284
Query: 410 KCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLI 467
+ DV+SFGVL+ E+ L + P + + L ++L R+ P+ E L
Sbjct: 285 QSDVWSFGVLMWEIFT-------LGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNE-LY 335
Query: 468 SIMEVGFSCLKESPESRPTMKIVSQQL 494
+M C P RPT K + + L
Sbjct: 336 MMMR---DCWHAVPSQRPTFKQLVEDL 359
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 366 SRNNIT-GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI 424
SR I DFG++ L +N F GT Y++PE + + D++S G+ ++E+
Sbjct: 140 SRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 425 KGKHP 429
G++P
Sbjct: 198 VGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 366 SRNNIT-GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI 424
SR I DFG++ L +N F GT Y++PE + + D++S G+ ++E+
Sbjct: 140 SRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 425 KGKHP 429
G++P
Sbjct: 198 VGRYP 202
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 54/141 (38%), Gaps = 29/141 (20%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+AK L D + G + + Y APE + + DV+SFGV++ E+
Sbjct: 157 ADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFT-- 213
Query: 428 HPRDFLSSTSSPS--------LNTDI------ALDEMLDPRLPVPSCSVQEKLISIMEVG 473
+ + SPS D+ RLP P E + E+
Sbjct: 214 ----YCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAE----VHELM 265
Query: 474 FSCLKESPESRPTMKIVSQQL 494
C SP+ RP+ + QL
Sbjct: 266 KLCWAPSPQDRPSFSALGPQL 286
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 20/143 (13%)
Query: 360 LGALNI----SRNNITGDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDV 413
L A NI R DFG+++ + + S G ++A E + T + DV
Sbjct: 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDV 235
Query: 414 YSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEM-LDPRLPVP-SCSVQEKLISIME 471
+SFGVL+ E++ L P + + + + R+ P +CS E++ +M
Sbjct: 236 WSFGVLLWEIVT-------LGGNPYPGIPPERLFNLLKTGHRMERPDNCS--EEMYRLM- 285
Query: 472 VGFSCLKESPESRPTMKIVSQQL 494
C K+ P+ RP +S+ L
Sbjct: 286 --LQCWKQEPDKRPVFADISKDL 306
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++ + S GT YIAPE+ + EKCDV+S GV++ ++ G P
Sbjct: 172 DFGLSTHFEA-SKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 373 DFGIAKFLKPDSSNW--TGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ S+N+ T + T Y APE+ M E D++S G ++ E++KG
Sbjct: 167 DFGLAR---TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++ L +N F GT Y++PE + + D++S G+ ++E+ G++P
Sbjct: 175 DFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ S T + T Y APE+ M E D++S G ++ E+IKG
Sbjct: 169 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ S T + T Y APE+ M E D++S G ++ E+IKG
Sbjct: 169 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ S T + T Y APE+ M E D++S G ++ E+IKG
Sbjct: 169 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++ L +N F GT Y++PE + + D++S G+ ++E+ G++P
Sbjct: 148 DFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ S T + T Y APE+ M E D++S G ++ E+IKG
Sbjct: 169 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 216 SISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDNL-VLTKLSLDDNHF 274
S+ L+L ++FS + T L++ L +L G +P + L +L KL L NHF
Sbjct: 252 SVESLNLQEHRFSDISSTTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHF 310
Query: 275 TSYLPQNICRGGALQIFTVSENRFQGTIPK------SLRNCTSLIRVRLDGNNLTGNISK 328
+C+ A +++ +G + K L +L + L N++ +
Sbjct: 311 -----DQLCQISAANFPSLTHLYIRGNVKKLHLGVGCLEKLGNLQTLDLSHNDIEASDCC 365
Query: 329 AFGI--YPNLTFIDLSRNNFYGEISSNFGECPKLGALNIS 366
+ + +L ++LS N G S F ECP+L L+++
Sbjct: 366 SLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLA 405
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ S T + T Y APE+ M E D++S G ++ E+IKG
Sbjct: 170 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ S T + T Y APE+ M E D++S G ++ E+IKG
Sbjct: 169 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ S T + T Y APE+ M E D++S G ++ E+IKG
Sbjct: 169 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 87/222 (39%), Gaps = 45/222 (20%)
Query: 288 LQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFY 347
++I V EN + G R C ++ LDG L I + F + +
Sbjct: 118 VRIVDVYENLYAG------RKCLLIVXECLDGGELFSRIQDR----GDQAFTEREAS--- 164
Query: 348 GEISSNFGECPK-LGALNISRNNIT-----------------GDFGIAKFLKPDSSNWTG 389
EI + GE + L ++NI+ ++ DFG AK +S T
Sbjct: 165 -EIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 223
Query: 390 FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS---SPSLNTDIA 446
Y Y+APE+ K + CD +S GV+ ++ G P F S+ SP T I
Sbjct: 224 CYTPY-YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPP--FYSNHGLAISPGXKTRIR 280
Query: 447 LDEMLDPRLPVPSCS-VQEKLISIMEVGFSCLKESPESRPTM 487
+ P P S V E++ ++ + LK P R T+
Sbjct: 281 XGQY---EFPNPEWSEVSEEVKXLIR---NLLKTEPTQRXTI 316
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 29/142 (20%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGT---YGYIAPE-LAY-TMKITEKCDVYSFG 417
+ N++ DFG+++ + D+ +T AG + APE LAY T I K DV++FG
Sbjct: 163 VGENHVVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYNTFSI--KSDVWAFG 218
Query: 418 VLVLEVIKGKHPRDFLSSTSSPSLNTDIA-LDEMLDP--RLPVPS-CSVQEKLISIMEVG 473
VL+ E+ + SP D++ + ++L+ R+ P C + + E+
Sbjct: 219 VLLWEIA---------TYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPK-----VYELM 264
Query: 474 FSCLKESPESRPTMKIVSQQLR 495
+C K SP RP+ Q
Sbjct: 265 RACWKWSPADRPSFAETHQAFE 286
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
+ DFG++K P S T GT GY+APE+ ++ D +S GV+ ++ G P
Sbjct: 159 MISDFGLSKMEDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++ + S GT YIAPE+ + EKCDV+S GV++ ++ G P
Sbjct: 195 DFGLSTHFEA-SKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 249
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GD G+A + +S GT + APE Y K E DVY+FG LE ++P
Sbjct: 174 GDLGLATLKR--ASFAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 17/72 (23%)
Query: 370 ITGDFGIAKFL---KPDSSNWTGFAGTYGYIAPELAYTMKITEKC--------DVYSFGV 418
+ DFG+ K L + S +G GT G+IAPE+ ++E C D++S G
Sbjct: 163 MISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM-----LSEDCKENPTYTVDIFSAGC 217
Query: 419 LVLEVI-KGKHP 429
+ VI +G HP
Sbjct: 218 VFYYVISEGSHP 229
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++ + S GT YIAPE+ + EKCDV+S GV++ ++ G P
Sbjct: 196 DFGLSTHFEA-SKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 250
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 101/229 (44%), Gaps = 30/229 (13%)
Query: 158 SIPLEVGQLSSMVELALFSNNLNGSVPHSL-GNLTQISMLFLHDN--SFSGFIPPDIGNL 214
S+P G SS L L SN L S+PH + LTQ++ L L N SF G
Sbjct: 21 SVP--TGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGT 77
Query: 215 KSISILSLAINQFSGPIPLS---LGNLTNLKQFSLVYNNLYG----SIPPSLDNLVLTKL 267
S+ L L+ F+G I +S LG L L+ ++NL S+ SL NL+
Sbjct: 78 TSLKYLDLS---FNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY--- 130
Query: 268 SLDDNHFTSYLPQNICRGG--ALQIFTVSENRFQGT----IPKSLRNCTSLIRVRLDGNN 321
LD +H + + N G +L++ ++ N FQ I LRN T L +
Sbjct: 131 -LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ 189
Query: 322 LTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNI 370
L+ AF +L +++S NNF+ + + L L+ S N+I
Sbjct: 190 LSPT---AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 235
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++K P S T GT GY+APE+ ++ D +S GV+ ++ G P
Sbjct: 162 DFGLSKMEDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%)
Query: 139 VGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFL 198
G+ + ++LY+ NQ+ P +L+ + L L +N L LTQ++ L L
Sbjct: 34 TGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSL 93
Query: 199 HDNSFSGFIPPDIGNLKSISILSLAINQF 227
+DN NLKS++ + L N +
Sbjct: 94 NDNQLKSIPRGAFDNLKSLTHIWLLNNPW 122
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 181 GSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTN 240
SVP + TQ+ L+L+DN + P L ++ L L NQ + LT
Sbjct: 30 ASVPTGIPTTTQV--LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQ 87
Query: 241 LKQFSLVYNNLYGSIPP-SLDNL 262
L Q SL N L SIP + DNL
Sbjct: 88 LTQLSLNDNQL-KSIPRGAFDNL 109
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
+ DFG++K P S T GT GY+APE+ ++ D +S GV+ ++ G P
Sbjct: 159 MISDFGLSKMEDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+APE+ + + D ++ GVL+ ++ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C+ I + + C +SRP +
Sbjct: 220 YDGIPASEISSILEK-------GERLPQPPICT-----IDVYMIMRKCWMIDADSRPKFR 267
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
+ DFG++K P S T GT GY+APE+ ++ D +S GV+ ++ G P
Sbjct: 159 MISDFGLSKMEDPGSVLSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 57/141 (40%), Gaps = 3/141 (2%)
Query: 165 QLSSMVELALFSNNLNGSVPHSL-GNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLA 223
+L+++ L L N L S+P+ + LT + L L +N L +++ L+LA
Sbjct: 83 ELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLA 141
Query: 224 INQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDNLV-LTKLSLDDNHFTSYLPQNI 282
NQ LTNL + L YN L D L L L L N S
Sbjct: 142 HNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVF 201
Query: 283 CRGGALQIFTVSENRFQGTIP 303
R +LQ + +N + T P
Sbjct: 202 DRLTSLQYIWLHDNPWDCTCP 222
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG++ + S GT YIAPE+ + EKCDV+S GV++ ++ G
Sbjct: 172 DFGLSTHFEA-SKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 223
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 163 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C+ I + + C +SRP +
Sbjct: 223 YDGIPASEISSILEK-------GERLPQPPICT-----IDVYMIMRKCWMIDADSRPKFR 270
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ S F T Y APE+ M E D++S G ++ E+IKG
Sbjct: 171 DFGLAR-TAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 310 TSLIRVRLDGNNLTGN-ISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRN 368
TSL +++ GN+ N +S F NLTF+DLS+ F +L LN+S N
Sbjct: 443 TSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHN 502
Query: 369 NI 370
N+
Sbjct: 503 NL 504
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%)
Query: 139 VGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFL 198
G+ + ++LY+ NQ+ P +L+ + L L +N L LTQ++ L L
Sbjct: 26 TGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSL 85
Query: 199 HDNSFSGFIPPDIGNLKSISILSLAINQF 227
+DN NLKS++ + L N +
Sbjct: 86 NDNQLKSIPRGAFDNLKSLTHIWLLNNPW 114
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 181 GSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTN 240
SVP + TQ+ L+L+DN + P L ++ L L NQ + LT
Sbjct: 22 ASVPTGIPTTTQV--LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQ 79
Query: 241 LKQFSLVYNNLYGSIPP-SLDNL 262
L Q SL N L SIP + DNL
Sbjct: 80 LTQLSLNDNQL-KSIPRGAFDNL 101
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG+AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 170 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 229
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C+ I + + C +SRP +
Sbjct: 230 YDGIPASEISSILEK-------GERLPQPPICT-----IDVYMIMRKCWMIDADSRPKFR 277
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 310 TSLIRVRLDGNNLTGN-ISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRN 368
TSL +++ GN+ N +S F NLTF+DLS+ F +L LN+S N
Sbjct: 448 TSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHN 507
Query: 369 NI 370
N+
Sbjct: 508 NL 509
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 167 DFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 227 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 274
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 162 DFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 222 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 269
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 67/164 (40%), Gaps = 28/164 (17%)
Query: 360 LGALNISRNN----ITGDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKC 411
L A N+ +N GDFG+AK + + G + + Y APE K
Sbjct: 160 LAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKEYKFYYAS 218
Query: 412 DVYSFGVLVLEVI-----KGKHPRDFLSSTS-SPSLNTDIALDEMLD--PRLPVPSCSVQ 463
DV+SFGV + E++ P FL + T + L E+L+ RLP P
Sbjct: 219 DVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPA 278
Query: 464 EKLISIMEVGFSCLKESPESRPT-------MKIVSQQLRISAPS 500
E + + +C + RPT +K V ++ + APS
Sbjct: 279 E----VYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPS 318
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 160 DFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 220 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 267
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTY--GYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHP 429
DFG AK L + + G ++A E T + DV+S+GV V E++ G P
Sbjct: 164 DFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
D + ++ S+ RLP P C++ +I + C +SRP +
Sbjct: 224 YDGIPASEISSILEK-------GERLPQPPICTIDVYMIMV-----KCWMIDADSRPKFR 271
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 15/106 (14%)
Query: 396 YIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP-- 453
++APE + T + DV+SFGVL+ E+ L + P + + L ++L
Sbjct: 259 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------LGGSPYPGVPVE-ELFKLLKEGH 310
Query: 454 RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQL-RISA 498
R+ PS E + + + C P RPT K + + L RI A
Sbjct: 311 RMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDLDRIVA 352
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 25/130 (19%)
Query: 318 DGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNI------- 370
+G++L ++ + ID++R G ++ + ++ NNI
Sbjct: 114 EGSSLYKHLHVQETKFQMFQLIDIARQTAQG---MDYLHAKNIIHRDMKSNNIFLHEGLT 170
Query: 371 --TGDFGIAKFLKPDSSNWTGF------AGTYGYIAPELAYTMK---ITEKCDVYSFGVL 419
GDFG+A S W+G G+ ++APE+ + + DVYS+G++
Sbjct: 171 VKIGDFGLATV----KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIV 226
Query: 420 VLEVIKGKHP 429
+ E++ G+ P
Sbjct: 227 LYELMTGELP 236
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 54/149 (36%), Gaps = 19/149 (12%)
Query: 357 CPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVY 414
CP G R GDFG+A+ + G ++ PE T K D +
Sbjct: 193 CPGPG-----RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 247
Query: 415 SFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVG 473
SFGVL+ E+ G P S S+ + + +DP P + +
Sbjct: 248 SFGVLLWEIFSLGYMP---YPSKSNQEVLEFVTSGGRMDPPKNCPG--------PVYRIM 296
Query: 474 FSCLKESPESRPTMKIVSQQLRISAPSLD 502
C + PE RP I+ +++ D
Sbjct: 297 TQCWQHQPEDRPNFAIILERIEYCTQDPD 325
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++ + S GT YIAPE+ + EKCDV+S GV++ ++ G P
Sbjct: 178 DFGLSTHFEA-SKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 232
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG+A ++ D + GT ++APE+ + + D++S GV+ ++ G P F
Sbjct: 162 DFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP--F 218
Query: 433 LSSTSSPSL 441
L T +L
Sbjct: 219 LGDTKQETL 227
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++ + ++ GT YIAPE+ EKCDV+S GV++ ++ G P
Sbjct: 167 DFGLSTCFQQNT-KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 54/149 (36%), Gaps = 19/149 (12%)
Query: 357 CPKLGALNISRNNITGDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVY 414
CP G R GDFG+A+ + G ++ PE T K D +
Sbjct: 216 CPGPG-----RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 270
Query: 415 SFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVG 473
SFGVL+ E+ G P S S+ + + +DP P + +
Sbjct: 271 SFGVLLWEIFSLGYMP---YPSKSNQEVLEFVTSGGRMDPPKNCPG--------PVYRIM 319
Query: 474 FSCLKESPESRPTMKIVSQQLRISAPSLD 502
C + PE RP I+ +++ D
Sbjct: 320 TQCWQHQPEDRPNFAIILERIEYCTQDPD 348
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG+A ++ D + GT ++APE+ + + D++S GV+ ++ G P F
Sbjct: 162 DFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP--F 218
Query: 433 LSSTSSPSL 441
L T +L
Sbjct: 219 LGDTKQETL 227
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG+A ++ D + GT ++APE+ + + D++S GV+ ++ G P F
Sbjct: 162 DFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP--F 218
Query: 433 LSSTSSPSL 441
L T +L
Sbjct: 219 LGDTKQETL 227
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG+A ++ D + GT ++APE+ + + D++S GV+ ++ G P F
Sbjct: 162 DFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP--F 218
Query: 433 LSSTSSPSL 441
L T +L
Sbjct: 219 LGDTKQETL 227
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG+A ++ D + GT ++APE+ + + D++S GV+ ++ G P F
Sbjct: 162 DFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP--F 218
Query: 433 LSSTSSPSL 441
L T +L
Sbjct: 219 LGDTKQETL 227
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 12/66 (18%)
Query: 371 TGDFGIAKFLKPDS------------SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGV 418
GDFG+ + D + TG GT Y++PE + + K D++S G+
Sbjct: 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGL 218
Query: 419 LVLEVI 424
++ E++
Sbjct: 219 ILFELL 224
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 392 GTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GT YIAPE+ K EKCDV+S GV++ ++ G P
Sbjct: 168 GTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 26/140 (18%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGT------YGYIAPELAYTMKITEKCDVYSF 416
++ NN+ DFG+A+ D +N T ++APE + T + DV+SF
Sbjct: 190 VTENNVMKIADFGLAR----DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 417 GVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIMEVGF 474
GVL+ E+ L + P + + L ++L R+ P+ E L +M
Sbjct: 246 GVLMWEIFT-------LGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNE-LYMMMR--- 293
Query: 475 SCLKESPESRPTMKIVSQQL 494
C P RPT K + + L
Sbjct: 294 DCWHAVPSQRPTFKQLVEDL 313
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 26/140 (18%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGT------YGYIAPELAYTMKITEKCDVYSF 416
++ NN+ DFG+A+ D +N T ++APE + T + DV+SF
Sbjct: 190 VTENNVMKIADFGLAR----DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 417 GVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIMEVGF 474
GVL+ E+ L + P + + L ++L R+ P+ E L +M
Sbjct: 246 GVLMWEIFT-------LGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNE-LYMMMR--- 293
Query: 475 SCLKESPESRPTMKIVSQQL 494
C P RPT K + + L
Sbjct: 294 DCWHAVPSQRPTFKQLVEDL 313
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG+A ++ D + GT ++APE+ + + D++S GV+ ++ G P F
Sbjct: 162 DFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP--F 218
Query: 433 LSSTSSPSL 441
L T +L
Sbjct: 219 LGDTKQETL 227
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFGIA ++ + + GT ++APE+ + + D++S GV+ ++ G P F
Sbjct: 176 DFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP--F 232
Query: 433 LSSTSSPSL 441
L T +L
Sbjct: 233 LGETKQETL 241
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 392 GTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GT YIAPE+ K EKCDV+S GV++ ++ G P
Sbjct: 185 GTAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFGIA ++ + + GT ++APE+ + + D++S GV+ ++ G P F
Sbjct: 155 DFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP--F 211
Query: 433 LSSTSSPSL 441
L T +L
Sbjct: 212 LGETKQETL 220
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI 424
GDFG+ LK D GT Y++PE + ++ D+Y+ G+++ E++
Sbjct: 164 GDFGLVTSLKNDGKRXRS-KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 12/66 (18%)
Query: 371 TGDFGIAKFLKPDSSNWT------------GFAGTYGYIAPELAYTMKITEKCDVYSFGV 418
GDFG+ + D T G GT Y++PE + + K D++S G+
Sbjct: 205 VGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGL 264
Query: 419 LVLEVI 424
++ E++
Sbjct: 265 ILFELL 270
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG A + D + + Y APE+ + ++ CDV+S G +++E +
Sbjct: 180 DFGSATY---DDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEY--------Y 228
Query: 433 LSSTSSPSLNTDIALDEMLDPRLPVPSCSVQE 464
L T P+ ++ L M P+P +Q+
Sbjct: 229 LGFTVFPTHDSKEHLAMMERILGPLPKHMIQK 260
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 19/141 (13%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVYSFGVLV 420
++ +N+ DFG+A+ + G ++APE + T + DV+SFGVL+
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
Query: 421 LEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIMEVGFSCLK 478
E+ L + P + + L ++L R+ PS E + + + C
Sbjct: 243 WEIFT-------LGGSPYPGVPVE-ELFKLLKEGHRMDKPSNCTNELYMMMRD----CWH 290
Query: 479 ESPESRPTMKIVSQQL-RISA 498
P RPT K + + L RI A
Sbjct: 291 AVPSQRPTFKQLVEDLDRIVA 311
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 18/130 (13%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI--- 424
GDFG+ K L D + G + + Y APE K + DV+SFGV++ E+
Sbjct: 157 GDFGLTKVLPQDKEYYKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 215
Query: 425 -KGKH-PRDFLSSTSSPSLNTDIA--LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLK 478
K K P +F+ + I L E+L + RLP P E + + E C
Sbjct: 216 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE----CWN 271
Query: 479 ESPESRPTMK 488
+ RP+ +
Sbjct: 272 NNVNQRPSFR 281
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 18/104 (17%)
Query: 396 YIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALDEMLDPR 454
++APE K + D++S+GV++ EV G P S N D+ EM+ R
Sbjct: 196 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-------NQDVV--EMIRNR 246
Query: 455 --LPVP-SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLR 495
LP P C + + C E P RP K + +LR
Sbjct: 247 QVLPCPDDCPAW-----VYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFGIA ++ + + GT ++APE+ + + D++S GV+ ++ G P F
Sbjct: 162 DFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP--F 218
Query: 433 LSSTSSPSL 441
L T +L
Sbjct: 219 LGETKQETL 227
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 361 GALNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPEL--AYTMKITEKCDVYSFGV 418
G L IS DFG +K L + F GT Y+APE+ + D++S G
Sbjct: 160 GVLKIS------DFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGC 213
Query: 419 LVLEVIKGKHP 429
++E+ GK P
Sbjct: 214 TIIEMATGKPP 224
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 18/104 (17%)
Query: 396 YIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALDEMLDPR 454
++APE K + D++S+GV++ EV G P S N D+ EM+ R
Sbjct: 213 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-------NQDVV--EMIRNR 263
Query: 455 --LPVP-SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLR 495
LP P C + + C E P RP K + +LR
Sbjct: 264 QVLPCPDDCPAW-----VYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLE 422
+S +N+ DFG+ K + S+ TG + APE K + K DV+SFG+L+ E
Sbjct: 135 VSEDNVAKVSDFGLTK--EASSTQDTGKLPV-KWTAPEALREKKFSTKSDVWSFGILLWE 191
Query: 423 V 423
+
Sbjct: 192 I 192
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 15/106 (14%)
Query: 396 YIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP-- 453
++APE + T + DV+SFGVL+ E+ L + P + + L ++L
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------LGGSPYPGVPVE-ELFKLLKEGH 269
Query: 454 RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQL-RISA 498
R+ PS E L +M C P RPT K + + L RI A
Sbjct: 270 RMDKPSNCTNE-LYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 15/106 (14%)
Query: 396 YIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP-- 453
++APE + T + DV+SFGVL+ E+ L + P + + L ++L
Sbjct: 210 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------LGGSPYPGVPVE-ELFKLLKEGH 261
Query: 454 RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQL-RISA 498
R+ PS E + + + C P RPT K + + L RI A
Sbjct: 262 RMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDLDRIVA 303
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT Y+AP + + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 15/106 (14%)
Query: 396 YIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP-- 453
++APE + T + DV+SFGVL+ E+ L + P + + L ++L
Sbjct: 207 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------LGGSPYPGVPVE-ELFKLLKEGH 258
Query: 454 RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQL-RISA 498
R+ PS E + + + C P RPT K + + L RI A
Sbjct: 259 RMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDLDRIVA 300
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 53/141 (37%), Gaps = 29/141 (20%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+AK L D G + + Y APE + + DV+SFGV++ E+
Sbjct: 153 ADFGLAKLLPLDKDXXVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFT-- 209
Query: 428 HPRDFLSSTSSPS--------LNTDI------ALDEMLDPRLPVPSCSVQEKLISIMEVG 473
+ + SPS D+ RLP P E + E+
Sbjct: 210 ----YCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAE----VHELM 261
Query: 474 FSCLKESPESRPTMKIVSQQL 494
C SP+ RP+ + QL
Sbjct: 262 KLCWAPSPQDRPSFSALGPQL 282
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLE 422
+S +N+ DFG+ K + S+ TG + APE K + K DV+SFG+L+ E
Sbjct: 150 VSEDNVAKVSDFGLTK--EASSTQDTGKLPV-KWTAPEALREKKFSTKSDVWSFGILLWE 206
Query: 423 V 423
+
Sbjct: 207 I 207
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG + + S GT Y+ PE+ EK D++ GVL E++ G P
Sbjct: 165 ADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP-- 220
Query: 432 FLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLI 467
F S++ + + + +D +P + + KL+
Sbjct: 221 FESASHNETYRRIVKVDLKFPASVPTGAQDLISKLL 256
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 361 GALNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPEL--AYTMKITEKCDVYSFGV 418
G L IS DFG +K L + F GT Y+APE+ + D++S G
Sbjct: 146 GVLKIS------DFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGC 199
Query: 419 LVLEVIKGKHP 429
++E+ GK P
Sbjct: 200 TIIEMATGKPP 210
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 15/106 (14%)
Query: 396 YIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP-- 453
++APE + T + DV+SFGVL+ E+ L + P + + L ++L
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------LGGSPYPGVPVE-ELFKLLKEGH 269
Query: 454 RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQL-RISA 498
R+ PS E + + + C P RPT K + + L RI A
Sbjct: 270 RMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 27/145 (18%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGT------YGYIAPELAYTMKITEKCDVYSF 416
++ +N+ DFG+A+ D + + T ++APE + T + DV+SF
Sbjct: 183 VTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 417 GVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP--RLPVPSCSVQEKLISIMEVGF 474
GVL+ E+ L + P + + L ++L R+ PS E + + +
Sbjct: 239 GVLLWEIFT-------LGGSPYPGVPVE-ELFKLLKEGHRMDKPSNCTNELYMMMRD--- 287
Query: 475 SCLKESPESRPTMKIVSQQL-RISA 498
C P RPT K + + L RI A
Sbjct: 288 -CWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 15/106 (14%)
Query: 396 YIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP-- 453
++APE + T + DV+SFGVL+ E+ L + P + + L ++L
Sbjct: 211 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------LGGSPYPGVPVE-ELFKLLKEGH 262
Query: 454 RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQL-RISA 498
R+ PS E + + + C P RPT K + + L RI A
Sbjct: 263 RMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDLDRIVA 304
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 15/106 (14%)
Query: 396 YIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDP-- 453
++APE + T + DV+SFGVL+ E+ L + P + + L ++L
Sbjct: 203 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT-------LGGSPYPGVPVE-ELFKLLKEGH 254
Query: 454 RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQL-RISA 498
R+ PS E + + + C P RPT K + + L RI A
Sbjct: 255 RMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDLDRIVA 296
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + S GT Y+ PE+ EK D++ GVL E + G
Sbjct: 151 KGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 210
Query: 428 HPRDFLSSTSS 438
P D S T +
Sbjct: 211 PPFDSPSHTET 221
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + S GT Y+ PE+ EK D++ GVL E + G
Sbjct: 150 KGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209
Query: 428 HPRDFLSSTSS 438
P D S T +
Sbjct: 210 PPFDSPSHTET 220
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAY-TMKITEKCDVYSFGVLVLEVIKGK 427
DFG A+ L + T Y APEL +K + DV++ G LV E+ G+
Sbjct: 167 DFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLE 422
+S +N+ DFG+ K + S+ TG + APE K + K DV+SFG+L+ E
Sbjct: 322 VSEDNVAKVSDFGLTK--EASSTQDTGKLPV-KWTAPEALREKKFSTKSDVWSFGILLWE 378
Query: 423 V 423
+
Sbjct: 379 I 379
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++ + ++ GT YIAPE+ EKCDV+S GV++ ++ G P
Sbjct: 167 DFGLSTCFQQNT-KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG++ + ++ GT YIAPE+ EKCDV+S GV++ ++ G P
Sbjct: 167 DFGLSTCFQQNT-KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 145 LKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSL-GNLTQISMLFLHDNSF 203
+K+L + SN++ SIP +V +L ++ EL + SN L SVP + LT + ++LH N +
Sbjct: 423 IKVLDLHSNKI-KSIPKQVVKLEALQELNVASNQL-KSVPDGIFDRLTSLQKIWLHTNPW 480
Query: 204 SGFIP 208
P
Sbjct: 481 DCSCP 485
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG AK ++ + T Y+APE+ K + CD++S GV++ ++ G P F
Sbjct: 174 DFGFAKETTQNALQTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP--F 229
Query: 433 LSSTS---SPSLNTDIAL 447
S+T SP + I L
Sbjct: 230 YSNTGQAISPGMKRRIRL 247
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 371 TGDFGIAKF---LKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
G+ IA F + S GT Y+ PE+ EK D++ GVL E + G
Sbjct: 150 KGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209
Query: 428 HPRDFLSSTSS 438
P D S T +
Sbjct: 210 PPFDSPSHTET 220
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 37/153 (24%)
Query: 360 LGALNISRNN----ITGDFGIAKFLKPDSSNW-----TGFAGTYGYIAPELAYTMKITEK 410
L A N+ +N GDFG+AK + P+ + G + + Y APE K
Sbjct: 138 LAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWY-APECLKECKFYYA 195
Query: 411 CDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLN------------TDIALDEMLD--PRLP 456
DV+SFGV + E++ + S SP T + L E+L+ RLP
Sbjct: 196 SDVWSFGVTLYELLT------YCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLP 249
Query: 457 VPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
P C + I + +C + RPT +
Sbjct: 250 RPDRCPCE-----IYHLMKNCWETEASFRPTFQ 277
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 361 GALNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPE-LAYTMKITEKCDVYSFGVL 419
G + IS + DF K P +S GT+GY+APE L + D +S G +
Sbjct: 329 GHVRISDLGLACDFSKKK---PHAS-----VGTHGYMAPEVLQKGVAYDSSADWFSLGCM 380
Query: 420 VLEVIKGKHP 429
+ ++++G P
Sbjct: 381 LFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 361 GALNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPE-LAYTMKITEKCDVYSFGVL 419
G + IS + DF K P +S GT+GY+APE L + D +S G +
Sbjct: 328 GHVRISDLGLACDFSKKK---PHAS-----VGTHGYMAPEVLQKGVAYDSSADWFSLGCM 379
Query: 420 VLEVIKGKHP 429
+ ++++G P
Sbjct: 380 LFKLLRGHSP 389
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 37/153 (24%)
Query: 360 LGALNISRNN----ITGDFGIAKFLKPDSSNW-----TGFAGTYGYIAPELAYTMKITEK 410
L A N+ +N GDFG+AK + P+ + G + + Y APE K
Sbjct: 137 LAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWY-APECLKECKFYYA 194
Query: 411 CDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLN------------TDIALDEMLD--PRLP 456
DV+SFGV + E++ + S SP T + L E+L+ RLP
Sbjct: 195 SDVWSFGVTLYELLT------YCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLP 248
Query: 457 VPS-CSVQEKLISIMEVGFSCLKESPESRPTMK 488
P C + I + +C + RPT +
Sbjct: 249 RPDRCPCE-----IYHLMKNCWETEASFRPTFQ 276
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG AK ++ + T Y+APE+ K + CD++S GV++ ++ G P F
Sbjct: 155 DFGFAKETTQNALQTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP--F 210
Query: 433 LSSTS---SPSLNTDIAL 447
S+T SP + I L
Sbjct: 211 YSNTGQAISPGMKRRIRL 228
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 361 GALNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPE-LAYTMKITEKCDVYSFGVL 419
G + IS + DF K P +S GT+GY+APE L + D +S G +
Sbjct: 329 GHVRISDLGLACDFSKKK---PHAS-----VGTHGYMAPEVLQKGVAYDSSADWFSLGCM 380
Query: 420 VLEVIKGKHP 429
+ ++++G P
Sbjct: 381 LFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 361 GALNISRNNITGDFGIAKFLKPDSSNWTGFAGTYGYIAPE-LAYTMKITEKCDVYSFGVL 419
G + IS + DF K P +S GT+GY+APE L + D +S G +
Sbjct: 329 GHVRISDLGLACDFSKKK---PHAS-----VGTHGYMAPEVLQKGVAYDSSADWFSLGCM 380
Query: 420 VLEVIKGKHP 429
+ ++++G P
Sbjct: 381 LFKLLRGHSP 390
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 22/156 (14%)
Query: 360 LGALNISRNN----ITGDFGIAKFLKPDSSNW-----TGFAGTYGYIAPELAYTMKITEK 410
L A N+ +N GDFG+AK + P+ + G + + Y APE K
Sbjct: 143 LAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWY-APECLKEYKFYYA 200
Query: 411 CDVYSFGVLVLEVI-----KGKHPRDFLSSTS-SPSLNTDIALDEMLD--PRLPVPS--- 459
DV+SFGV + E++ P FL + T + L E+L+ RLP P
Sbjct: 201 SDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCP 260
Query: 460 CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLR 495
C V + + E S P +K V ++ R
Sbjct: 261 CEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYR 296
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GDFG+A+ + DS+ ++APE + T + DV+S+G+L+ E+
Sbjct: 200 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---- 255
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEK-LISIMEVGFSCLKESPESRPTMK 488
L P + + +++ + + K + SIM+ +C P RPT +
Sbjct: 256 ---LGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ---ACWALEPTHRPTFQ 309
Query: 489 IVSQQLRISA 498
+ L+ A
Sbjct: 310 QICSFLQEQA 319
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GDFG+A+ + DS+ ++APE + T + DV+S+G+L+ E+
Sbjct: 208 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---- 263
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEK-LISIMEVGFSCLKESPESRPTMK 488
L P + + +++ + + K + SIM+ +C P RPT +
Sbjct: 264 ---LGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ---ACWALEPTHRPTFQ 317
Query: 489 IVSQQLRISA 498
+ L+ A
Sbjct: 318 QICSFLQEQA 327
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GDFG+A+ + DS+ ++APE + T + DV+S+G+L+ E+
Sbjct: 194 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---- 249
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEK-LISIMEVGFSCLKESPESRPTMK 488
L P + + +++ + + K + SIM+ +C P RPT +
Sbjct: 250 ---LGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ---ACWALEPTHRPTFQ 303
Query: 489 IVSQQLRISA 498
+ L+ A
Sbjct: 304 QICSFLQEQA 313
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 22/156 (14%)
Query: 360 LGALNISRNN----ITGDFGIAKFLKPDSSNW-----TGFAGTYGYIAPELAYTMKITEK 410
L A N+ +N GDFG+AK + P+ + G + + Y APE K
Sbjct: 143 LAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWY-APECLKEYKFYYA 200
Query: 411 CDVYSFGVLVLEVI-----KGKHPRDFLSSTS-SPSLNTDIALDEMLD--PRLPVPS--- 459
DV+SFGV + E++ P FL + T + L E+L+ RLP P
Sbjct: 201 SDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCP 260
Query: 460 CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLR 495
C V + + E S P +K V ++ R
Sbjct: 261 CEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYR 296
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI--- 424
GDFG+ K L D G + + Y APE K + DV+SFGV++ E+
Sbjct: 174 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 232
Query: 425 -KGKH-PRDFLSSTSSPSLNTDIA--LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLK 478
K K P +F+ + I L E+L + RLP P E + + E C
Sbjct: 233 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE----CWN 288
Query: 479 ESPESRPTMK 488
+ RP+ +
Sbjct: 289 NNVNQRPSFR 298
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GDFG+A+ + DS+ ++APE + T + DV+S+G+L+ E+
Sbjct: 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---- 261
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEK-LISIMEVGFSCLKESPESRPTMK 488
L P + + +++ + + K + SIM+ +C P RPT +
Sbjct: 262 ---LGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ---ACWALEPTHRPTFQ 315
Query: 489 IVSQQLRISA 498
+ L+ A
Sbjct: 316 QICSFLQEQA 325
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ S T + T Y APE+ M E D++S G ++ E+++ K
Sbjct: 169 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ S T T Y APE+ M E D++S G ++ E+IKG
Sbjct: 169 DFGLAR-TAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 18/130 (13%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI--- 424
GDFG+ K L D + G + + Y APE K + DV+SFGV++ E+
Sbjct: 156 GDFGLTKVLPQDKEFFKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 214
Query: 425 -KGKH-PRDFLSSTSSPSLNTDIA--LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLK 478
K K P +F+ + I L E+L + RLP P E + + E C
Sbjct: 215 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE----CWN 270
Query: 479 ESPESRPTMK 488
+ RP+ +
Sbjct: 271 NNVNQRPSFR 280
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ S T + T Y APE+ M E D++S G ++ E+++ K
Sbjct: 169 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ S T + T Y APE+ M E D++S G ++ E+++ K
Sbjct: 162 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ S T + T Y APE+ M E D++S G ++ E+++ K
Sbjct: 168 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ S T + T Y APE+ M E D++S G ++ E+++ K
Sbjct: 162 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ S T + T Y APE+ M E D++S G ++ E+++ K
Sbjct: 170 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GDFG+A+ + DS+ ++APE + T + DV+S+G+L+ E+
Sbjct: 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---- 261
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEK-LISIMEVGFSCLKESPESRPTMK 488
L P + + +++ + + K + SIM+ +C P RPT +
Sbjct: 262 ---LGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ---ACWALEPTHRPTFQ 315
Query: 489 IVSQQLRISA 498
+ L+ A
Sbjct: 316 QICSFLQEQA 325
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ S T + T Y APE+ M E D++S G ++ E+++ K
Sbjct: 207 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ S T + T Y APE+ M E D++S G ++ E+++ K
Sbjct: 169 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ S T + T Y APE+ M E D++S G ++ E+++ K
Sbjct: 170 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ S T + T Y APE+ M E D++S G ++ E+++ K
Sbjct: 163 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ S T + T Y APE+ M E D++S G ++ E+++ K
Sbjct: 169 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI--- 424
GDFG+ K L D G + + Y APE K + DV+SFGV++ E+
Sbjct: 174 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 232
Query: 425 -KGKH-PRDFLSSTSSPSLNTDIA--LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLK 478
K K P +F+ + I L E+L + RLP P E + + E C
Sbjct: 233 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE----CWN 288
Query: 479 ESPESRPTMK 488
+ RP+ +
Sbjct: 289 NNVNQRPSFR 298
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ S T + T Y APE+ M E D++S G ++ E+++ K
Sbjct: 163 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 373 DFGIAKFLKPDSSN-WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A K D N + GT ++APE+ + + D++S GV+ ++ G P
Sbjct: 161 DFGLAH--KIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP-- 216
Query: 432 FLSSTSSPSL 441
FL T +L
Sbjct: 217 FLGDTKQETL 226
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ S T + T Y APE+ M E D++S G ++ E+++ K
Sbjct: 169 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG AK +K W GT +APE+ + + D ++ GVL+ E+ G P
Sbjct: 184 DFGFAKRVK--GRTWX-LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ S T + T Y APE+ M E D++S G ++ E+++ K
Sbjct: 169 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGT--YGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GDFG+A+ + DS+ ++APE + T + DV+S+G+L+ E+
Sbjct: 202 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---- 257
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEK-LISIMEVGFSCLKESPESRPTMK 488
L P + + +++ + + K + SIM+ +C P RPT +
Sbjct: 258 ---LGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ---ACWALEPTHRPTFQ 311
Query: 489 IVSQQLRISA 498
+ L+ A
Sbjct: 312 QICSFLQEQA 321
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 181 GSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTN 240
SVP + TQ+ L+L+DN + P L ++ L L NQ + LT
Sbjct: 22 ASVPTGIPTTTQV--LYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQ 79
Query: 241 LKQFSLVYNNLYGSIPP-SLDNL 262
L Q SL N L SIP + DNL
Sbjct: 80 LTQLSLNDNQL-KSIPRGAFDNL 101
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%)
Query: 139 VGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFL 198
G+ + ++LY+ N++ P +L+ + L L +N L LTQ++ L L
Sbjct: 26 TGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSL 85
Query: 199 HDNSFSGFIPPDIGNLKSISILSLAINQF 227
+DN NL+S++ + L N +
Sbjct: 86 NDNQLKSIPRGAFDNLRSLTHIWLLNNPW 114
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
DFG+A+ S T + T Y APE+ M E D++S G ++ E+++ K
Sbjct: 207 DFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%)
Query: 139 VGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFL 198
G+ + + L++++NQ+ P L ++ +L SN L LTQ++ L L
Sbjct: 29 AGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDL 88
Query: 199 HDNSFSGFIPPDIGNLKSISILSLAINQF 227
+DN NLKS++ + L N +
Sbjct: 89 NDNHLKSIPRGAFDNLKSLTHIYLYNNPW 117
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPE-LAYTMKIT-----EKCDVYSFGVLVLEVIKG 426
DFG + L+P GT GY+APE L +M T ++ D+++ GV++ ++ G
Sbjct: 243 DFGFSCHLEP-GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
Query: 427 KHP 429
P
Sbjct: 302 SPP 304
>pdb|2V70|A Chain A, Third Lrr Domain Of Human Slit2
pdb|2V70|B Chain B, Third Lrr Domain Of Human Slit2
pdb|2V70|C Chain C, Third Lrr Domain Of Human Slit2
pdb|2V70|D Chain D, Third Lrr Domain Of Human Slit2
Length = 220
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 3/125 (2%)
Query: 148 LYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFI 207
+ + SN+L+ L S+ L L SN + S L+ + +L L+DN +
Sbjct: 86 ILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVA 145
Query: 208 PPDIGNLKSISILSLAINQFSGPIPLS-LGNLTNLKQFSLVYNNLYGSIPPSLDNLVLTK 266
P L S+S L+L N F+ L+ LG L++ +V N P L + +
Sbjct: 146 PGAFDTLHSLSTLNLLANPFNCNCYLAWLGEW--LRKKRIVTGNPRCQKPYFLKEIPIQD 203
Query: 267 LSLDD 271
+++ D
Sbjct: 204 VAIQD 208
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI--- 424
GDFG+ K L D G + + Y APE K + DV+SFGV++ E+
Sbjct: 161 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 219
Query: 425 -KGKH-PRDFLSSTSSPSLNTDIA--LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLK 478
K K P +F+ + I L E+L + RLP P E + + E C
Sbjct: 220 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE----CWN 275
Query: 479 ESPESRPTMK 488
+ RP+ +
Sbjct: 276 NNVNQRPSFR 285
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI--- 424
GDFG+ K L D G + + Y APE K + DV+SFGV++ E+
Sbjct: 163 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 221
Query: 425 -KGKH-PRDFLSSTSSPSLNTDIA--LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLK 478
K K P +F+ + I L E+L + RLP P E + + E C
Sbjct: 222 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE----CWN 277
Query: 479 ESPESRPTMK 488
+ RP+ +
Sbjct: 278 NNVNQRPSFR 287
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI--- 424
GDFG+ K L D G + + Y APE K + DV+SFGV++ E+
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 217
Query: 425 -KGKH-PRDFLSSTSSPSLNTDIA--LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLK 478
K K P +F+ + I L E+L + RLP P E + + E C
Sbjct: 218 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE----CWN 273
Query: 479 ESPESRPTMK 488
+ RP+ +
Sbjct: 274 NNVNQRPSFR 283
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI--- 424
GDFG+ K L D G + + Y APE K + DV+SFGV++ E+
Sbjct: 156 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 214
Query: 425 -KGKH-PRDFLSSTSSPSLNTDIA--LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLK 478
K K P +F+ + I L E+L + RLP P E + + E C
Sbjct: 215 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE----CWN 270
Query: 479 ESPESRPTMK 488
+ RP+ +
Sbjct: 271 NNVNQRPSFR 280
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI--- 424
GDFG+ K L D G + + Y APE K + DV+SFGV++ E+
Sbjct: 162 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 220
Query: 425 -KGKH-PRDFLSSTSSPSLNTDIA--LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLK 478
K K P +F+ + I L E+L + RLP P E + + E C
Sbjct: 221 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE----CWN 276
Query: 479 ESPESRPTMK 488
+ RP+ +
Sbjct: 277 NNVNQRPSFR 286
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI--- 424
GDFG+ K L D G + + Y APE K + DV+SFGV++ E+
Sbjct: 187 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 245
Query: 425 -KGKH-PRDFLSSTSSPSLNTDIA--LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLK 478
K K P +F+ + I L E+L + RLP P E + + E C
Sbjct: 246 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE----CWN 301
Query: 479 ESPESRPTMK 488
+ RP+ +
Sbjct: 302 NNVNQRPSFR 311
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI--- 424
GDFG+ K L D G + + Y APE K + DV+SFGV++ E+
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 217
Query: 425 -KGKH-PRDFLSSTSSPSLNTDIA--LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLK 478
K K P +F+ + I L E+L + RLP P E + + E C
Sbjct: 218 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE----CWN 273
Query: 479 ESPESRPTMK 488
+ RP+ +
Sbjct: 274 NNVNQRPSFR 283
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI--- 424
GDFG+ K L D G + + Y APE K + DV+SFGV++ E+
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 217
Query: 425 -KGKH-PRDFLSSTSSPSLNTDIA--LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLK 478
K K P +F+ + I L E+L + RLP P E + + E C
Sbjct: 218 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE----CWN 273
Query: 479 ESPESRPTMK 488
+ RP+ +
Sbjct: 274 NNVNQRPSFR 283
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI--- 424
GDFG+ K L D G + + Y APE K + DV+SFGV++ E+
Sbjct: 156 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 214
Query: 425 -KGKH-PRDFLSSTSSPSLNTDIA--LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLK 478
K K P +F+ + I L E+L + RLP P E + + E C
Sbjct: 215 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE----CWN 270
Query: 479 ESPESRPTMK 488
+ RP+ +
Sbjct: 271 NNVNQRPSFR 280
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
GDFG+ K L D G + + Y APE K + DV+SFGV++ E+
Sbjct: 155 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT-- 211
Query: 428 HPRDFLSSTSSP 439
++ + SP
Sbjct: 212 ----YIEKSKSP 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVI--- 424
GDFG+ K L D G + + Y APE K + DV+SFGV++ E+
Sbjct: 154 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTYI 212
Query: 425 -KGKH-PRDFLSSTSSPSLNTDIA--LDEML--DPRLPVPSCSVQEKLISIMEVGFSCLK 478
K K P +F+ + I L E+L + RLP P E + + E C
Sbjct: 213 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE----CWN 268
Query: 479 ESPESRPTMK 488
+ RP+ +
Sbjct: 269 NNVNQRPSFR 278
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 372 GDFGIAKFLKPDSSNWT----GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGK 427
GDFG+ K L D G + + Y APE K + DV+SFGV++ E+
Sbjct: 160 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT-- 216
Query: 428 HPRDFLSSTSSP 439
++ + SP
Sbjct: 217 ----YIEKSKSP 224
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 142 MSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDN 201
+S+L++LY+D NQ+ PL L+++ L++ + ++ P L NL++++ L DN
Sbjct: 128 LSNLQVLYLDLNQITNISPL--AGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDN 183
Query: 202 SFSGFIPPDIGNLKSISILSLAINQFSGPIPLS 234
S P + +L ++ + L NQ S PL+
Sbjct: 184 KISDISP--LASLPNLIEVHLKNNQISDVSPLA 214
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 83/219 (37%), Gaps = 52/219 (23%)
Query: 142 MSHLKILYIDSNQLDGSIPLEVGQ---LSSMVELALFSNNLNGSVPHSLGNLTQISMLFL 198
+ HL+IL + N + +EVG L S+ L LF N L + L+++ L+L
Sbjct: 58 LRHLEILQLSKNLVRK---IEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWL 114
Query: 199 HDNSFSGF-------IPP----DIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLV 247
+N +P D+G LK + +S A F G L NL+ +L
Sbjct: 115 RNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEA--AFEG--------LVNLRYLNLG 164
Query: 248 YNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLR 307
NL P+L LV L+ +S NR P S +
Sbjct: 165 MCNLKDI--PNLTALV-----------------------RLEELELSGNRLDLIRPGSFQ 199
Query: 308 NCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNF 346
TSL ++ L + AF +L ++LS NN
Sbjct: 200 GLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 373 DFGIAKFLKPDSSN-WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A K D N + GT ++APE+ + + D++S GV+ ++ G P
Sbjct: 161 DFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP-- 216
Query: 432 FLSSTSSPSL 441
FL T +L
Sbjct: 217 FLGDTKQETL 226
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 373 DFGIAKFLKPDSSN-WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A K D N + GT ++APE+ + + D++S GV+ ++ G P
Sbjct: 161 DFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP-- 216
Query: 432 FLSSTSSPSL 441
FL T +L
Sbjct: 217 FLGDTKQETL 226
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 373 DFGIAKFLKPDSSN-WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A K D N + GT ++APE+ + + D++S GV+ ++ G P
Sbjct: 161 DFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP-- 216
Query: 432 FLSSTSSPSL 441
FL T +L
Sbjct: 217 FLGDTKQETL 226
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 373 DFGIAKFLKPDSSN-WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A K D N + GT ++APE+ + + D++S GV+ ++ G P
Sbjct: 161 DFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP-- 216
Query: 432 FLSSTSSPSL 441
FL T +L
Sbjct: 217 FLGDTKQETL 226
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 373 DFGIAKFLKPDSSN-WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A K D N + GT ++APE+ + + D++S GV+ ++ G P
Sbjct: 161 DFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP-- 216
Query: 432 FLSSTSSPSL 441
FL T +L
Sbjct: 217 FLGDTKQETL 226
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 373 DFGIAKFLKPDSSN-WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A K D N + GT ++APE+ + + D++S GV+ ++ G P
Sbjct: 161 DFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP-- 216
Query: 432 FLSSTSSPSL 441
FL T +L
Sbjct: 217 FLGDTKQETL 226
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 373 DFGIAKFLKPDSSNWTG-FAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPR- 430
DFGIA + G GT Y APE T + D+Y+ ++ E + G P
Sbjct: 177 DFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQ 236
Query: 431 -DFLSSTSSPSLNTDIALDEMLDPRLPV 457
D LS + +N I + P +PV
Sbjct: 237 GDQLSVXGA-HINQAIPRPSTVRPGIPV 263
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 373 DFGIAKFLKPDSSN-WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A K D N + GT ++APE+ + + D++S GV+ ++ G P
Sbjct: 161 DFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP-- 216
Query: 432 FLSSTSSPSL 441
FL T +L
Sbjct: 217 FLGDTKQETL 226
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 372 GDFGIAKFLKPDSSNWTGFAG--TYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GDFG+ + + G G ++APE T D++SFGV++ E+
Sbjct: 169 GDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---- 224
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
L+ L+ + L ++D + E++ +M + C + +P+ RPT
Sbjct: 225 ---LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPT 275
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 373 DFGIAKFLKPDSSN-WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A K D N + GT ++APE+ + + D++S GV+ ++ G P
Sbjct: 160 DFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP-- 215
Query: 432 FLSSTSSPSL 441
FL T +L
Sbjct: 216 FLGDTKQETL 225
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 365 ISRNNIT--GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLE 422
+S +N+ DFG+ K + S+ TG + APE + K DV+SFG+L+ E
Sbjct: 141 VSEDNVAKVSDFGLTK--EASSTQDTGKLPV-KWTAPEALREAAFSTKSDVWSFGILLWE 197
Query: 423 V 423
+
Sbjct: 198 I 198
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 373 DFGIAKFLKPDSSN-WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A K D N + GT ++APE+ + + D++S GV+ ++ G P
Sbjct: 161 DFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP-- 216
Query: 432 FLSSTSSPSL 441
FL T +L
Sbjct: 217 FLGDTKQETL 226
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 373 DFGIAKFLKPDSSN-WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A K D N + GT ++APE+ + + D++S GV+ ++ G P
Sbjct: 161 DFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP-- 216
Query: 432 FLSSTSSPSL 441
FL T +L
Sbjct: 217 FLGDTKQETL 226
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 373 DFGIAKFLKPDSSN-WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A K D N + GT ++APE+ + + D++S GV+ ++ G P
Sbjct: 161 DFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP-- 216
Query: 432 FLSSTSSPSL 441
FL T +L
Sbjct: 217 FLGDTKQETL 226
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 373 DFGIAKFLKPDSSN-WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A K D N + GT ++APE+ + + D++S GV+ ++ G P
Sbjct: 160 DFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP-- 215
Query: 432 FLSSTSSPSL 441
FL T +L
Sbjct: 216 FLGDTKQETL 225
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 372 GDFGIAKFLKPDSSNWTGFAG--TYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GDFG+ + + G G ++APE T D++SFGV++ E+
Sbjct: 172 GDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---- 227
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
L+ L+ + L ++D + E++ +M + C + +P+ RPT
Sbjct: 228 ---LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPT 278
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 373 DFGIAKFLKPDSSN-WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431
DFG+A K D N + GT ++APE+ + + D++S GV+ ++ G P
Sbjct: 161 DFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP-- 216
Query: 432 FLSSTSSPSL 441
FL T +L
Sbjct: 217 FLGDTKQETL 226
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 181 GSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSL-GNLT 239
SVP + TQ+ L L+ N + P +L ++ L+LA+NQ + +P+ + LT
Sbjct: 32 ASVPAGIPTTTQV--LHLYINQITKLEPGVFDSLTQLTYLNLAVNQLTA-LPVGVFDKLT 88
Query: 240 NLKQFSLVYNNLYGSIPPSL-DNL-VLTKLSLDDN 272
L +L N L SIP + DNL LT + L +N
Sbjct: 89 KLTHLALHINQL-KSIPMGVFDNLKSLTHIYLFNN 122
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 140 GLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLH 199
G + L L + NQL S+PL L ++ L + N L +L L ++ L+L
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 200 DNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGN-LTNLKQFSLVYNNLYGSIP 256
N P + + LSLA NQ + +P L N L NL L N+LY +IP
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTE-LPAGLLNGLENLDTLLLQENSLY-TIP 188
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 83/219 (37%), Gaps = 52/219 (23%)
Query: 142 MSHLKILYIDSNQLDGSIPLEVGQ---LSSMVELALFSNNLNGSVPHSLGNLTQISMLFL 198
+ HL+IL + N + +EVG L S+ L LF N L + L+++ L+L
Sbjct: 58 LRHLEILQLSKNLVRK---IEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWL 114
Query: 199 HDNSFSGF-------IPP----DIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLV 247
+N +P D+G LK + +S A F G L NL+ +L
Sbjct: 115 RNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEA--AFEG--------LVNLRYLNLG 164
Query: 248 YNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLR 307
NL P+L LV L+ +S NR P S +
Sbjct: 165 MCNLKDI--PNLTALV-----------------------RLEELELSGNRLDLIRPGSFQ 199
Query: 308 NCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNF 346
TSL ++ L + AF +L ++LS NN
Sbjct: 200 GLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 373 DFGIAKFLKPDSSNW--TGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKG 426
DFG+A+ +N+ T + T Y APE+ M D++S G ++ E++KG
Sbjct: 169 DFGLAR---TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 140 GLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLH 199
G + L L + NQL S+PL L ++ L + N L +L L ++ L+L
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 200 DNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGN-LTNLKQFSLVYNNLYGSIP 256
N P + + LSLA NQ + +P L N L NL L N+LY +IP
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTE-LPAGLLNGLENLDTLLLQENSLY-TIP 188
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 391 AGTYGYIAPE-LAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
AGT G+ APE L T D++S GV+ L ++ G++P
Sbjct: 207 AGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432
DFG++K + + GT GY+APE+ ++ D +S GV+ ++ G P F
Sbjct: 152 DFGLSKM--EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP--F 207
Query: 433 LSSTSS 438
T S
Sbjct: 208 YEETES 213
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 372 GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GDFG+A L G GT ++APE+ + DV+ GV++ ++ G P
Sbjct: 175 GDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
+ DFG++K ++ + GT GY+APE+ ++ D +S GV+ ++ G P
Sbjct: 163 MISDFGLSK-MEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 102/245 (41%), Gaps = 11/245 (4%)
Query: 135 IPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSN----NLNGSVPHSLGNL 190
+P + M+ LK L +++N D + S+ +L + N +L L NL
Sbjct: 292 LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMRKLDLGTRCLEKLENL 351
Query: 191 TQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNN 250
++ + D S + NL+ + L+L+ N+ G + L+ + + +
Sbjct: 352 QKLDLSH-SDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTH 410
Query: 251 LYGSIPPS-LDNLVLTKLSLDDNHFTSYLPQNICRG-GALQIFTVSENRFQ-GTIPKS-- 305
L+ P S NL L ++ + Q++ G L+ + N FQ G+I K+
Sbjct: 411 LHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNL 470
Query: 306 LRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNI 365
L+ SL + L NL +AF N+ +DLS N+ G+ L LN+
Sbjct: 471 LQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTGDSMDALSHLKGL-YLNM 529
Query: 366 SRNNI 370
+ NNI
Sbjct: 530 ASNNI 534
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 372 GDFGIAKFLKPDSSNWTGFAG--TYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GDFG+ + + + G G ++APE T D++SFGV++ E+
Sbjct: 172 GDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---- 227
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
L+ L+ + L ++D + E++ +M + C + +P+ RPT
Sbjct: 228 ---LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPT 278
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 140 GLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLH 199
G + L L + NQL S+PL L ++ L + N L +L L ++ L+L
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 200 DNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGN-LTNLKQFSLVYNNLYGSIP 256
N P + + LSLA NQ + +P L N L NL L N+LY +IP
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTE-LPAGLLNGLENLDTLLLQENSLY-TIP 188
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 310 TSLIRVRLDGNNLTGNISKAFG--IYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISR 367
TS+ + L N L F + NLT +DLS NN + + +F P L L++
Sbjct: 222 TSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEY 281
Query: 368 NNI 370
NNI
Sbjct: 282 NNI 284
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 43/109 (39%)
Query: 264 LTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLT 323
+T L+L N P N R L I N P+ + L + L N L+
Sbjct: 27 ITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELS 86
Query: 324 GNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITG 372
+ F NLT +DL N+ + S+ F L L++S N ++
Sbjct: 87 QISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSS 135
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 372 GDFGIAKFLKPDSSNWTGFAG--TYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
GDFG+ + + G G ++APE T D++SFGV++ E+
Sbjct: 172 GDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---- 227
Query: 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486
L+ L+ + L ++D + E++ +M + C + +P RPT
Sbjct: 228 ---LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPT 278
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 142 MSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNL----NGSVPHSLGNLTQISMLF 197
+SHL++LY++ N L+ P L+++ L+L SN L + +P +L L
Sbjct: 479 LSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEIL------- 531
Query: 198 LHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLS 234
D S + + P+ S+S+L + N+F LS
Sbjct: 532 --DISRNQLLAPNPDVFVSLSVLDITHNKFICECELS 566
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 51 NVSSKISPCAWSGISCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKL 107
N +KI+ A+ G+ D +V+N+S L G+L++ +F P +AY+DL+ N +
Sbjct: 300 NKINKIADEAFYGL---DNLQVLNLS---YNLLGELYSSNFYGLPKVAYIDLQKNHI 350
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 107/281 (38%), Gaps = 52/281 (18%)
Query: 142 MSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHS--LGNLTQISMLFLH 199
+ +L+IL + S+++ P L + EL L+ L+ +V NL ++ L L
Sbjct: 72 LPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLS 131
Query: 200 DNSF-SGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLT--NLKQFSLVYNNLY---- 252
N S ++ P G L S+ + + NQ L L L FSL N+LY
Sbjct: 132 KNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVS 191
Query: 253 ---GSIPPSLDNLVLTKLSLDDNHFTSYLPQN----ICRGGALQIFTV------------ 293
G N+VL L + N +T + N I + A +
Sbjct: 192 VDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251
Query: 294 ----SENRFQGTIPKSLRNC------------------TSLIRVRLDGNNLTGNISKAFG 331
+N F G S+R+ L + L N + +AF
Sbjct: 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFY 311
Query: 332 IYPNLTFIDLSRNNFYGEI-SSNFGECPKLGALNISRNNIT 371
NL ++LS N GE+ SSNF PK+ +++ +N+I
Sbjct: 312 GLDNLQVLNLSYN-LLGELYSSNFYGLPKVAYIDLQKNHIA 351
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 140 GLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLH 199
G + L L + NQL S+PL L ++ L + N L +L L ++ L+L
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 200 DNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGN-LTNLKQFSLVYNNLYGSIP 256
N P + + LSLA NQ + +P L N L NL L N+LY +IP
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTE-LPAGLLNGLENLDTLLLQENSLY-TIP 188
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Query: 372 GDFGIAKFLKPDSSNWT---GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH 428
GDFG+ K ++ D T + APE K DV+SFGV + E++
Sbjct: 156 GDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT--- 212
Query: 429 PRDFLSSTSSP 439
+ S SSP
Sbjct: 213 ---YCDSDSSP 220
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Query: 372 GDFGIAKFLKPDSSNWT---GFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH 428
GDFG+ K ++ D T + APE K DV+SFGV + E++
Sbjct: 168 GDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT--- 224
Query: 429 PRDFLSSTSSP 439
+ S SSP
Sbjct: 225 ---YCDSDSSP 232
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 303 PKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGA 362
P L N SL+ L N+L S+AF PNL ++DLS N+ + F + L
Sbjct: 60 PTRLTNLHSLL---LSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEV 116
Query: 363 LNISRNNIT 371
L + N+I
Sbjct: 117 LLLYNNHIV 125
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG+ L P S GT + APE+A + D++S GVL ++ G P
Sbjct: 194 DFGLTAHLDPKQSVKVT-TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 373 DFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429
DFG+ L P S GT + APE+A + D++S GVL ++ G P
Sbjct: 300 DFGLTAHLDPKQSVKVT-TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|3GYP|A Chain A, Rtt106p
Length = 261
Score = 28.5 bits (62), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 166 LSSMVELALFSNNLNGSVPHSL--GNLTQISMLFLHDN-SFSGFIP-PDIGNLKSI--SI 219
L ++L + +N++GS +L GN ++S+ L+ N + F+P P+ NL + +
Sbjct: 26 LRKKLDLVFYLSNVDGSPVITLLKGNDRELSIYQLNKNIKMASFLPVPEKPNLIYLFMTY 85
Query: 220 LSLAINQFSGPIPLSLGNLTNLKQF 244
S N+FS P+ ++L L QF
Sbjct: 86 TSCEDNKFSEPVVMTLNKENTLNQF 110
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,947,730
Number of Sequences: 62578
Number of extensions: 555871
Number of successful extensions: 2643
Number of sequences better than 100.0: 768
Number of HSP's better than 100.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 400
Number of HSP's that attempted gapping in prelim test: 1800
Number of HSP's gapped (non-prelim): 952
length of query: 502
length of database: 14,973,337
effective HSP length: 103
effective length of query: 399
effective length of database: 8,527,803
effective search space: 3402593397
effective search space used: 3402593397
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)