Query 010736
Match_columns 502
No_of_seqs 709 out of 4080
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 13:10:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010736.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010736hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 4.4E-48 1.5E-52 423.3 25.7 346 12-371 2-381 (768)
2 4eco_A Uncharacterized protein 100.0 3.6E-46 1.2E-50 399.5 20.2 337 21-371 29-501 (636)
3 1ogq_A PGIP-2, polygalacturona 100.0 5.9E-45 2E-49 356.4 20.8 292 18-345 2-302 (313)
4 4ecn_A Leucine-rich repeat pro 100.0 5.2E-44 1.8E-48 390.0 23.5 338 18-371 265-766 (876)
5 3v47_A TOLL-like receptor 5B a 100.0 1.3E-40 4.4E-45 342.9 24.8 319 57-376 6-413 (455)
6 3rgz_A Protein brassinosteroid 100.0 4.6E-41 1.6E-45 367.8 22.2 234 70-303 318-555 (768)
7 2id5_A Lingo-1, leucine rich r 100.0 9.2E-40 3.1E-44 338.7 28.3 322 60-382 12-344 (477)
8 3vq2_A TLR4, TOLL-like recepto 100.0 1.5E-37 5.1E-42 331.7 31.4 150 56-206 4-168 (606)
9 3t6q_A CD180 antigen; protein- 100.0 2.6E-37 8.9E-42 329.8 25.1 334 71-407 255-598 (606)
10 4g8a_A TOLL-like receptor 4; l 100.0 1.1E-36 3.7E-41 326.3 29.4 350 57-407 25-618 (635)
11 3v47_A TOLL-like receptor 5B a 100.0 8.7E-37 3E-41 314.3 21.3 306 57-372 2-385 (455)
12 2z7x_B TOLL-like receptor 1, v 100.0 1.6E-36 5.5E-41 317.7 19.0 164 213-379 322-489 (520)
13 3j0a_A TOLL-like receptor 5; m 100.0 1.5E-35 5.2E-40 327.4 27.8 313 58-372 13-376 (844)
14 4eco_A Uncharacterized protein 100.0 3.2E-36 1.1E-40 322.3 20.3 292 70-369 206-547 (636)
15 2z81_A CD282 antigen, TOLL-lik 100.0 6.7E-36 2.3E-40 315.1 22.4 154 58-213 3-170 (549)
16 3t6q_A CD180 antigen; protein- 100.0 5E-35 1.7E-39 312.1 29.4 301 70-372 33-414 (606)
17 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.3E-35 4.4E-40 313.8 24.4 301 70-380 52-519 (562)
18 1ziw_A TOLL-like receptor 3; i 100.0 5.7E-35 2E-39 315.9 29.7 311 71-382 249-634 (680)
19 2id5_A Lingo-1, leucine rich r 100.0 2.8E-35 9.7E-40 304.9 25.8 302 65-372 8-310 (477)
20 2z63_A TOLL-like receptor 4, v 100.0 2.9E-35 1E-39 311.5 25.8 145 236-380 393-540 (570)
21 4fcg_A Uncharacterized protein 100.0 2.1E-36 7E-41 297.6 14.5 273 18-323 23-314 (328)
22 3oja_B Anopheles plasmodium-re 100.0 4.7E-35 1.6E-39 311.4 23.3 291 71-374 52-361 (597)
23 3o6n_A APL1; leucine-rich repe 100.0 6.3E-35 2.1E-39 294.4 22.7 291 70-374 45-355 (390)
24 1ogq_A PGIP-2, polygalacturona 100.0 9.6E-36 3.3E-40 291.1 15.9 254 95-374 50-307 (313)
25 4ecn_A Leucine-rich repeat pro 100.0 8.3E-35 2.8E-39 317.6 21.5 290 70-369 448-787 (876)
26 1ziw_A TOLL-like receptor 3; i 100.0 5.9E-34 2E-38 308.0 27.2 300 70-370 25-365 (680)
27 3vq2_A TLR4, TOLL-like recepto 100.0 3.2E-33 1.1E-37 298.2 27.2 296 73-372 14-511 (606)
28 2z7x_B TOLL-like receptor 1, v 100.0 1.4E-33 4.8E-38 295.4 23.9 293 70-372 21-413 (520)
29 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4E-33 1.4E-37 294.7 25.4 156 72-237 33-193 (562)
30 2ft3_A Biglycan; proteoglycan, 100.0 1.5E-32 5.1E-37 270.8 27.8 283 75-369 38-331 (332)
31 3j0a_A TOLL-like receptor 5; m 100.0 4.5E-33 1.5E-37 307.6 26.2 296 70-370 48-393 (844)
32 1xku_A Decorin; proteoglycan, 100.0 3.3E-32 1.1E-36 268.2 27.0 268 95-369 52-330 (330)
33 2ft3_A Biglycan; proteoglycan, 100.0 6.5E-32 2.2E-36 266.3 25.5 279 58-345 32-331 (332)
34 4g8a_A TOLL-like receptor 4; l 100.0 7.6E-32 2.6E-36 288.6 27.5 181 40-234 11-192 (635)
35 1xku_A Decorin; proteoglycan, 100.0 3.8E-31 1.3E-35 260.6 27.3 267 96-371 32-306 (330)
36 2z81_A CD282 antigen, TOLL-lik 100.0 1.7E-32 5.8E-37 289.1 18.3 171 64-241 2-174 (549)
37 3o6n_A APL1; leucine-rich repe 100.0 2.1E-31 7.3E-36 268.6 24.5 266 92-370 42-307 (390)
38 3oja_B Anopheles plasmodium-re 100.0 1.9E-31 6.5E-36 283.6 24.2 273 93-372 49-338 (597)
39 2z80_A TOLL-like receptor 2, v 100.0 4.5E-32 1.6E-36 269.7 17.1 284 56-375 27-318 (353)
40 4fmz_A Internalin; leucine ric 100.0 4.4E-31 1.5E-35 261.9 24.2 284 70-375 44-328 (347)
41 4fmz_A Internalin; leucine ric 100.0 1E-30 3.6E-35 259.2 25.3 280 70-371 66-346 (347)
42 1o6v_A Internalin A; bacterial 100.0 9.9E-31 3.4E-35 269.9 25.6 282 70-372 68-389 (466)
43 3zyj_A Leucine-rich repeat-con 100.0 9.4E-31 3.2E-35 268.1 24.5 254 75-380 48-301 (440)
44 3zyi_A Leucine-rich repeat-con 100.0 1.6E-30 5.6E-35 267.2 25.4 238 95-380 75-312 (452)
45 2z63_A TOLL-like receptor 4, v 100.0 4.6E-31 1.6E-35 279.3 21.8 299 70-371 28-458 (570)
46 2z66_A Variable lymphocyte rec 100.0 3.3E-31 1.1E-35 258.1 15.8 283 58-356 6-296 (306)
47 3bz5_A Internalin-J, INLJ; leu 100.0 6.5E-30 2.2E-34 262.4 26.0 276 71-372 43-353 (457)
48 3bz5_A Internalin-J, INLJ; leu 100.0 8.3E-30 2.8E-34 261.6 26.7 271 70-373 64-370 (457)
49 2z80_A TOLL-like receptor 2, v 100.0 3.7E-31 1.3E-35 263.1 15.9 249 97-371 33-290 (353)
50 1o6v_A Internalin A; bacterial 100.0 6.7E-30 2.3E-34 263.7 24.9 279 70-372 46-345 (466)
51 2z66_A Variable lymphocyte rec 100.0 1.7E-30 5.7E-35 253.1 19.0 258 98-381 10-271 (306)
52 3zyi_A Leucine-rich repeat-con 100.0 2.8E-29 9.5E-34 258.0 23.5 236 61-299 56-303 (452)
53 4fcg_A Uncharacterized protein 100.0 8.7E-30 3E-34 250.3 18.5 235 93-347 79-314 (328)
54 1ozn_A Reticulon 4 receptor; N 100.0 2.9E-29 9.9E-34 241.8 18.2 223 73-299 14-238 (285)
55 3zyj_A Leucine-rich repeat-con 100.0 1.4E-28 4.7E-33 252.0 24.0 237 60-299 44-292 (440)
56 1jl5_A Outer protein YOPM; leu 100.0 6.3E-28 2.2E-32 247.4 26.9 263 70-372 91-371 (454)
57 1ozn_A Reticulon 4 receptor; N 100.0 5.2E-29 1.8E-33 240.0 17.6 224 98-324 14-239 (285)
58 3g06_A SSPH2 (leucine-rich rep 100.0 1.6E-28 5.3E-33 259.8 21.9 272 56-372 19-298 (622)
59 1jl5_A Outer protein YOPM; leu 100.0 1.5E-28 5E-33 252.1 19.0 249 70-348 11-291 (454)
60 2o6q_A Variable lymphocyte rec 100.0 6.3E-28 2.2E-32 230.5 21.2 215 56-274 2-217 (270)
61 1wwl_A Monocyte differentiatio 100.0 8.9E-31 3E-35 255.8 1.0 250 92-371 40-309 (312)
62 3o53_A Protein LRIM1, AGAP0063 100.0 2.1E-30 7.3E-35 253.7 3.3 260 72-369 12-273 (317)
63 1wwl_A Monocyte differentiatio 100.0 2.1E-30 7.1E-35 253.2 1.9 244 71-347 44-309 (312)
64 3o53_A Protein LRIM1, AGAP0063 100.0 1E-29 3.5E-34 248.8 6.0 242 96-374 11-253 (317)
65 3oja_A Leucine-rich immune mol 99.9 1.8E-28 6.1E-33 253.9 10.6 237 93-366 32-270 (487)
66 2z62_A TOLL-like receptor 4, v 99.9 1.3E-26 4.3E-31 222.2 21.1 206 95-300 28-238 (276)
67 3oja_A Leucine-rich immune mol 99.9 1.8E-28 6E-33 253.9 8.4 228 71-313 35-265 (487)
68 2z62_A TOLL-like receptor 4, v 99.9 2.4E-26 8.2E-31 220.3 19.6 227 99-376 11-242 (276)
69 1z7x_W Ribonuclease inhibitor; 99.9 4.5E-30 1.5E-34 264.6 -8.3 302 70-371 56-411 (461)
70 3m19_A Variable lymphocyte rec 99.9 2.8E-26 9.7E-31 216.6 15.1 192 57-254 3-194 (251)
71 1z7x_W Ribonuclease inhibitor; 99.9 2.6E-29 8.9E-34 258.9 -8.9 300 71-370 4-353 (461)
72 2o6q_A Variable lymphocyte rec 99.9 3.2E-24 1.1E-28 204.8 23.1 203 95-323 16-218 (270)
73 3rfs_A Internalin B, repeat mo 99.9 5.9E-25 2E-29 210.1 16.4 206 71-311 42-247 (272)
74 1p9a_G Platelet glycoprotein I 99.9 1.8E-24 6.1E-29 208.6 19.8 212 139-380 6-217 (290)
75 1p9a_G Platelet glycoprotein I 99.9 3E-24 1E-28 207.0 20.5 156 91-252 6-161 (290)
76 3g06_A SSPH2 (leucine-rich rep 99.9 4.6E-24 1.6E-28 225.6 23.8 247 70-357 61-307 (622)
77 3rfs_A Internalin B, repeat mo 99.9 1.2E-24 4.1E-29 208.0 17.2 211 91-335 37-247 (272)
78 4glp_A Monocyte differentiatio 99.9 4.1E-24 1.4E-28 208.3 15.0 227 95-347 64-307 (310)
79 4glp_A Monocyte differentiatio 99.9 3.6E-24 1.2E-28 208.7 12.9 225 71-299 65-307 (310)
80 2ast_B S-phase kinase-associat 99.9 5.6E-26 1.9E-30 224.0 -1.6 266 58-356 36-315 (336)
81 2xwt_C Thyrotropin receptor; s 99.9 2.7E-23 9.4E-28 194.6 16.7 195 96-296 32-236 (239)
82 2xwt_C Thyrotropin receptor; s 99.9 3.5E-23 1.2E-27 193.8 16.3 179 119-299 31-218 (239)
83 3goz_A Leucine-rich repeat-con 99.9 2E-25 6.7E-30 222.5 -0.2 86 287-372 197-298 (362)
84 3m19_A Variable lymphocyte rec 99.9 1.6E-22 5.5E-27 190.8 19.4 176 96-274 15-191 (251)
85 2ca6_A RAN GTPase-activating p 99.9 1.1E-25 3.9E-30 226.3 -2.6 94 281-374 211-319 (386)
86 2o6s_A Variable lymphocyte rec 99.9 6.9E-23 2.4E-27 187.5 16.0 182 58-261 6-187 (208)
87 3goz_A Leucine-rich repeat-con 99.9 2.5E-25 8.4E-30 221.8 -0.5 256 75-350 3-300 (362)
88 2ca6_A RAN GTPase-activating p 99.9 3.5E-25 1.2E-29 222.8 -1.3 238 91-351 28-320 (386)
89 3cvr_A Invasion plasmid antige 99.9 3.8E-23 1.3E-27 216.0 13.8 209 56-310 40-254 (571)
90 2ast_B S-phase kinase-associat 99.9 7.9E-25 2.7E-29 215.7 0.5 249 96-373 48-308 (336)
91 1h6u_A Internalin H; cell adhe 99.9 2.5E-22 8.4E-27 195.4 14.5 195 91-324 37-231 (308)
92 4ay9_X Follicle-stimulating ho 99.9 1.2E-21 4.3E-26 194.0 19.4 244 59-344 9-256 (350)
93 1h6u_A Internalin H; cell adhe 99.9 5.6E-22 1.9E-26 192.9 14.5 209 99-348 23-231 (308)
94 3cvr_A Invasion plasmid antige 99.9 1.4E-21 4.8E-26 204.2 18.1 193 96-332 60-252 (571)
95 2o6s_A Variable lymphocyte rec 99.9 1.5E-21 5.1E-26 178.6 15.3 179 98-285 10-188 (208)
96 4ay9_X Follicle-stimulating ho 99.9 5.4E-21 1.8E-25 189.5 20.2 242 98-370 12-258 (350)
97 3e6j_A Variable lymphocyte rec 99.9 5.3E-21 1.8E-25 177.7 17.0 160 56-231 16-175 (229)
98 4b8c_D Glucose-repressible alc 99.9 8.3E-23 2.8E-27 220.9 2.8 257 20-299 130-404 (727)
99 3ogk_B Coronatine-insensitive 99.8 3.6E-23 1.2E-27 219.8 -2.9 306 70-379 164-533 (592)
100 3ogk_B Coronatine-insensitive 99.8 3.7E-23 1.3E-27 219.7 -4.6 301 71-376 139-505 (592)
101 2v9t_B SLIT homolog 2 protein 99.8 3.7E-20 1.3E-24 170.8 16.1 156 59-229 11-166 (220)
102 2v9t_B SLIT homolog 2 protein 99.8 4.7E-20 1.6E-24 170.1 16.1 153 98-253 14-166 (220)
103 2v70_A SLIT-2, SLIT homolog 2 99.8 3.5E-20 1.2E-24 171.0 15.2 154 74-231 15-169 (220)
104 2v70_A SLIT-2, SLIT homolog 2 99.8 3.5E-20 1.2E-24 171.0 14.7 148 59-206 11-168 (220)
105 2xot_A Amphoterin-induced prot 99.8 3.3E-20 1.1E-24 184.6 13.9 175 74-252 22-202 (361)
106 3e6j_A Variable lymphocyte rec 99.8 2.1E-19 7.2E-24 166.8 17.0 153 98-254 22-174 (229)
107 2xot_A Amphoterin-induced prot 99.8 1.1E-19 3.7E-24 180.8 13.4 175 98-275 21-202 (361)
108 1h6t_A Internalin B; cell adhe 99.8 1.3E-19 4.5E-24 174.6 12.2 173 91-300 42-214 (291)
109 1h6t_A Internalin B; cell adhe 99.8 4E-19 1.4E-23 171.2 14.6 169 70-253 46-214 (291)
110 3omv_A RAF proto-oncogene seri 99.8 6E-21 2.1E-25 183.8 1.4 137 359-501 152-302 (307)
111 1m9s_A Internalin B; cell inva 99.8 3.1E-19 1.1E-23 188.4 14.2 186 75-276 26-211 (605)
112 1m9s_A Internalin B; cell inva 99.8 3E-19 1E-23 188.6 13.6 171 70-255 43-213 (605)
113 4ezg_A Putative uncharacterize 99.8 3.2E-19 1.1E-23 161.6 10.6 153 92-252 41-194 (197)
114 2p1m_B Transport inhibitor res 99.8 1.8E-21 6.2E-26 206.7 -8.2 303 70-376 105-498 (594)
115 4gt4_A Tyrosine-protein kinase 99.8 4.6E-20 1.6E-24 178.3 1.6 128 359-497 165-304 (308)
116 4ezg_A Putative uncharacterize 99.8 1.5E-18 5.1E-23 157.2 10.6 152 70-229 44-195 (197)
117 1w8a_A SLIT protein; signaling 99.8 5.9E-18 2E-22 152.6 14.1 129 75-207 13-142 (192)
118 1dce_A Protein (RAB geranylger 99.8 1.7E-21 5.7E-26 204.5 -11.7 120 217-341 443-567 (567)
119 4b8c_D Glucose-repressible alc 99.8 1.4E-19 4.8E-24 195.7 3.0 217 95-323 173-404 (727)
120 2p1m_B Transport inhibitor res 99.8 6.9E-21 2.4E-25 202.2 -7.4 305 70-379 130-526 (594)
121 1xeu_A Internalin C; cellular 99.8 2.9E-18 9.9E-23 162.6 11.4 167 72-254 21-187 (263)
122 4aoj_A High affinity nerve gro 99.8 9.7E-20 3.3E-24 177.7 1.2 129 359-498 178-318 (329)
123 3hmm_A TGF-beta receptor type- 99.7 1.8E-19 6.1E-24 174.4 1.9 128 370-498 148-296 (303)
124 1w8a_A SLIT protein; signaling 99.7 1.4E-17 4.8E-22 150.1 14.2 132 98-232 11-143 (192)
125 1dce_A Protein (RAB geranylger 99.7 1.3E-20 4.3E-25 197.8 -7.8 202 141-365 347-567 (567)
126 4asz_A BDNF/NT-3 growth factor 99.7 7.6E-20 2.6E-24 176.0 -2.5 129 359-498 148-288 (299)
127 1xeu_A Internalin C; cellular 99.7 2.5E-18 8.5E-23 163.0 7.0 171 93-301 17-187 (263)
128 2ell_A Acidic leucine-rich nuc 99.7 9.7E-18 3.3E-22 147.7 10.1 133 94-228 23-160 (168)
129 4ase_A Vascular endothelial gr 99.7 5.9E-19 2E-23 173.6 0.9 129 359-497 205-345 (353)
130 2o6r_A Variable lymphocyte rec 99.7 7.6E-17 2.6E-21 143.2 14.3 135 58-207 6-140 (177)
131 2je0_A Acidic leucine-rich nuc 99.7 9.4E-18 3.2E-22 144.6 7.7 128 94-223 16-148 (149)
132 2ell_A Acidic leucine-rich nuc 99.7 2.3E-17 7.9E-22 145.3 9.5 138 117-257 22-164 (168)
133 2wfh_A SLIT homolog 2 protein 99.7 1.1E-16 3.7E-21 144.3 14.0 126 75-205 15-140 (193)
134 2wfh_A SLIT homolog 2 protein 99.7 7.1E-17 2.4E-21 145.5 11.6 137 242-381 13-149 (193)
135 2o6r_A Variable lymphocyte rec 99.7 2.3E-16 8E-21 140.0 14.4 133 97-232 9-141 (177)
136 2je0_A Acidic leucine-rich nuc 99.7 3.5E-17 1.2E-21 141.0 6.1 128 118-247 16-148 (149)
137 3sb4_A Hypothetical leucine ri 99.7 2.3E-16 7.9E-21 154.7 11.0 217 142-365 100-328 (329)
138 4fdw_A Leucine rich hypothetic 99.6 8.4E-14 2.9E-18 139.7 24.1 261 94-367 112-379 (401)
139 1a9n_A U2A', U2A'; complex (nu 99.6 7.1E-16 2.4E-20 136.8 7.0 131 91-227 15-152 (176)
140 3fpq_A Serine/threonine-protei 99.6 6.9E-17 2.4E-21 154.3 0.1 110 371-492 173-282 (290)
141 4g3f_A NF-kappa-beta-inducing 99.6 7.3E-17 2.5E-21 156.9 0.2 118 371-497 192-314 (336)
142 1ds9_A Outer arm dynein; leuci 99.6 1.9E-18 6.4E-23 156.7 -11.1 147 94-245 17-180 (198)
143 4b9d_A Serine/threonine-protei 99.6 3.3E-17 1.1E-21 160.1 -5.0 111 371-492 166-276 (350)
144 3g39_A Variable lymphocyte rec 99.6 1.7E-14 5.9E-19 127.0 12.8 86 95-180 30-115 (170)
145 1a9n_A U2A', U2A'; complex (nu 99.6 2E-15 6.9E-20 133.9 6.8 134 113-252 13-153 (176)
146 4fih_A Serine/threonine-protei 99.6 1.6E-16 5.3E-21 155.1 -1.0 113 371-492 211-323 (346)
147 3sb4_A Hypothetical leucine ri 99.6 1.2E-14 4E-19 142.5 11.6 245 94-341 48-328 (329)
148 1ds9_A Outer arm dynein; leuci 99.6 4.7E-18 1.6E-22 154.0 -12.0 152 70-228 18-185 (198)
149 2r9u_A Variable lymphocyte rec 99.5 3.6E-14 1.2E-18 125.4 12.8 103 74-180 16-118 (174)
150 3g39_A Variable lymphocyte rec 99.5 5.3E-14 1.8E-18 123.9 12.2 107 97-206 11-117 (170)
151 3ubd_A Ribosomal protein S6 ki 99.5 6.3E-16 2.2E-20 148.4 -1.0 109 371-491 167-280 (304)
152 4fie_A Serine/threonine-protei 99.5 6.2E-16 2.1E-20 154.7 -1.8 125 359-492 267-400 (423)
153 3uim_A Brassinosteroid insensi 99.5 3.5E-15 1.2E-19 145.9 2.7 126 370-497 174-309 (326)
154 2r9u_A Variable lymphocyte rec 99.5 1.2E-13 4.2E-18 122.0 12.2 105 98-205 15-119 (174)
155 4fdw_A Leucine rich hypothetic 99.5 1.8E-12 6.3E-17 129.9 22.3 245 116-372 110-359 (401)
156 3hyh_A Carbon catabolite-derep 99.5 1.8E-15 6.2E-20 143.2 -0.3 109 371-492 153-262 (275)
157 3gxj_A TGF-beta receptor type- 99.5 1.7E-14 5.7E-19 139.3 4.8 130 369-499 147-297 (303)
158 3lb7_A RAF proto-oncogene seri 99.5 5.9E-15 2E-19 143.1 1.2 126 370-501 172-302 (307)
159 2qkw_B Protein kinase; three-h 99.5 1.3E-14 4.5E-19 141.5 3.7 126 370-497 179-313 (321)
160 3p86_A Serine/threonine-protei 99.4 4.2E-15 1.4E-19 144.3 -1.6 120 370-499 179-298 (309)
161 4aw0_A HPDK1, 3-phosphoinositi 99.4 3.6E-15 1.2E-19 143.2 -2.6 106 371-490 173-282 (311)
162 3soc_A Activin receptor type-2 99.4 1.4E-14 4.7E-19 141.5 0.6 128 370-498 171-317 (322)
163 2nru_A Interleukin-1 receptor- 99.4 4.8E-14 1.6E-18 136.5 3.7 127 370-500 173-307 (307)
164 3q4u_A Activin receptor type-1 99.4 1.5E-14 5E-19 139.6 -0.3 128 369-497 152-300 (301)
165 2ifg_A High affinity nerve gro 99.4 5.2E-13 1.8E-17 131.6 10.7 109 58-180 7-116 (347)
166 3poz_A Epidermal growth factor 99.4 3.1E-14 1.1E-18 139.3 1.5 115 370-497 157-276 (327)
167 4g31_A Eukaryotic translation 99.4 5.4E-15 1.8E-19 142.3 -4.1 121 359-492 138-279 (299)
168 3uzp_A CKI-delta, CKID, casein 99.4 3.8E-14 1.3E-18 136.4 1.2 122 370-497 148-278 (296)
169 3s95_A LIMK-1, LIM domain kina 99.4 3.7E-14 1.3E-18 137.6 0.8 121 369-498 147-281 (310)
170 2psq_A Fibroblast growth facto 99.4 5.7E-14 1.9E-18 139.9 2.1 117 370-497 243-362 (370)
171 2eva_A TAK1 kinase - TAB1 chim 99.4 5.3E-14 1.8E-18 136.3 1.2 118 370-499 146-263 (307)
172 4hgt_A Casein kinase I isoform 99.4 2E-14 6.9E-19 138.2 -1.8 124 370-497 148-278 (296)
173 3vhe_A Vascular endothelial gr 99.4 4.9E-14 1.7E-18 139.6 0.7 119 370-498 233-354 (359)
174 2ifg_A High affinity nerve gro 99.4 1.3E-12 4.5E-17 128.8 10.9 105 98-205 11-117 (347)
175 3op5_A Serine/threonine-protei 99.4 1.4E-14 4.7E-19 144.1 -3.5 123 370-497 194-327 (364)
176 3mdy_A Bone morphogenetic prot 99.4 5.4E-14 1.8E-18 137.9 0.6 131 370-501 182-333 (337)
177 3g2f_A Bone morphogenetic prot 99.4 5.5E-14 1.9E-18 137.9 0.7 126 370-498 160-317 (336)
178 3og7_A AKAP9-BRAF fusion prote 99.4 4.3E-14 1.5E-18 135.7 -0.3 123 370-498 160-287 (289)
179 3ugc_A Tyrosine-protein kinase 99.4 3.9E-14 1.3E-18 136.4 -0.7 127 370-500 154-292 (295)
180 3kex_A Receptor tyrosine-prote 99.4 8.4E-14 2.9E-18 136.1 1.7 118 370-498 155-275 (325)
181 1csn_A Casein kinase-1; phosph 99.4 3.5E-14 1.2E-18 136.8 -1.1 124 370-497 151-281 (298)
182 2v62_A Serine/threonine-protei 99.4 2.3E-14 7.9E-19 141.3 -2.6 128 369-499 192-328 (345)
183 4hcu_A Tyrosine-protein kinase 99.4 4.9E-14 1.7E-18 133.7 -0.4 119 370-499 146-266 (269)
184 1qcf_A Haematopoetic cell kina 99.4 5.6E-14 1.9E-18 143.9 -0.1 129 359-498 304-443 (454)
185 3sxs_A Cytoplasmic tyrosine-pr 99.4 8.4E-14 2.9E-18 132.0 1.1 119 370-499 144-264 (268)
186 3tt0_A Basic fibroblast growth 99.4 1.3E-13 4.5E-18 137.9 2.5 117 370-497 231-350 (382)
187 1luf_A Muscle-specific tyrosin 99.4 7.7E-14 2.6E-18 137.2 0.3 118 371-499 215-335 (343)
188 2ozo_A Tyrosine-protein kinase 99.3 1.6E-13 5.6E-18 145.5 2.6 128 358-497 455-596 (613)
189 3c1x_A Hepatocyte growth facto 99.3 1.1E-13 3.8E-18 137.8 1.1 118 370-498 232-354 (373)
190 2qol_A Ephrin receptor; recept 99.3 6.9E-14 2.4E-18 139.4 -0.5 115 370-497 187-307 (373)
191 4fs7_A Uncharacterized protein 99.3 9.7E-11 3.3E-15 117.5 22.4 271 86-367 62-375 (394)
192 3cbl_A C-FES, proto-oncogene t 99.3 7.8E-14 2.7E-18 139.3 -0.3 116 370-498 253-373 (377)
193 3kul_A Ephrin type-A receptor 99.3 8.7E-14 3E-18 136.0 0.0 117 370-498 191-312 (325)
194 1fmk_A C-SRC, P60-SRC, tyrosin 99.3 1.5E-13 5E-18 140.7 1.5 128 359-498 300-439 (452)
195 1mp8_A Focal adhesion kinase 1 99.3 1.5E-13 5.1E-18 131.3 1.4 117 370-497 156-274 (281)
196 3cc6_A Protein tyrosine kinase 99.3 1.8E-13 6E-18 130.7 1.9 118 370-498 153-272 (281)
197 3q60_A ROP5B; pseudokinase, tr 99.3 1.5E-13 5E-18 137.0 1.3 117 369-492 233-352 (371)
198 1k9a_A Carboxyl-terminal SRC k 99.3 1.3E-13 4.4E-18 141.0 0.9 114 371-498 330-444 (450)
199 3lzb_A Epidermal growth factor 99.3 1.7E-13 5.8E-18 134.0 1.7 118 370-498 157-277 (327)
200 3dbq_A Dual specificity protei 99.3 1.4E-13 4.6E-18 135.7 0.9 113 371-493 148-274 (343)
201 3qup_A Tyrosine-protein kinase 99.3 1.9E-13 6.5E-18 133.3 1.9 117 370-497 177-296 (323)
202 4f0f_A Serine/threonine-protei 99.3 1.7E-13 5.7E-18 131.3 1.5 117 370-497 169-287 (287)
203 1opk_A P150, C-ABL, proto-onco 99.3 1.7E-13 5.8E-18 141.8 1.4 115 371-498 359-477 (495)
204 4fl3_A Tyrosine-protein kinase 99.3 1.6E-13 5.5E-18 146.0 1.2 129 358-497 488-629 (635)
205 2c30_A Serine/threonine-protei 99.3 9.9E-14 3.4E-18 135.3 -0.5 114 370-492 181-294 (321)
206 3fxz_A Serine/threonine-protei 99.3 4.7E-14 1.6E-18 136.0 -2.8 115 369-492 155-269 (297)
207 2wqm_A Serine/threonine-protei 99.3 1.1E-13 3.9E-18 134.1 -0.2 122 370-499 176-297 (310)
208 2zmd_A Dual specificity protei 99.3 1.8E-13 6.1E-18 137.2 1.1 113 370-492 194-320 (390)
209 3brb_A Proto-oncogene tyrosine 99.3 1.6E-13 5.6E-18 133.2 0.7 120 370-500 187-309 (313)
210 3l9p_A Anaplastic lymphoma kin 99.3 1.4E-13 4.8E-18 136.9 -0.1 117 370-497 224-343 (367)
211 2ivs_A Proto-oncogene tyrosine 99.3 3.2E-13 1.1E-17 131.0 2.2 117 370-497 190-309 (314)
212 1t46_A HOMO sapiens V-KIT hard 99.3 1.7E-13 5.8E-18 132.9 0.1 119 370-498 185-306 (313)
213 3dtc_A Mitogen-activated prote 99.3 9.6E-14 3.3E-18 131.8 -2.0 116 370-497 156-271 (271)
214 3sv0_A Casein kinase I-like; t 99.3 1.6E-13 5.5E-18 141.0 -0.6 124 370-497 146-276 (483)
215 3gen_A Tyrosine-protein kinase 99.3 2.2E-13 7.6E-18 130.1 0.4 117 370-497 160-278 (283)
216 1u59_A Tyrosine-protein kinase 99.3 3.1E-13 1.1E-17 129.5 1.4 117 370-497 150-270 (287)
217 1xbb_A Tyrosine-protein kinase 99.3 3.4E-13 1.2E-17 129.5 1.6 117 370-497 157-277 (291)
218 1byg_A CSK, protein (C-termina 99.3 3.8E-13 1.3E-17 128.2 1.8 115 370-498 157-272 (278)
219 2xir_A Vascular endothelial gr 99.3 3.5E-13 1.2E-17 130.9 1.3 119 370-498 188-309 (316)
220 1u46_A ACK-1, activated CDC42 99.3 1.6E-13 5.5E-18 131.6 -1.1 119 370-500 161-285 (291)
221 3t9t_A Tyrosine-protein kinase 99.3 2E-13 6.9E-18 129.2 -0.5 119 370-499 144-264 (267)
222 2i1m_A Macrophage colony-stimu 99.3 2.6E-13 8.8E-18 133.0 0.2 118 370-497 204-324 (333)
223 2izr_A Casein kinase I isoform 99.3 7.5E-14 2.6E-18 136.7 -3.7 119 370-497 150-279 (330)
224 1mqb_A Ephrin type-A receptor 99.3 4.4E-13 1.5E-17 131.4 1.7 116 370-497 187-307 (333)
225 3pls_A Macrophage-stimulating 99.3 7.7E-13 2.6E-17 127.3 3.3 119 370-498 164-286 (298)
226 3soa_A Calcium/calmodulin-depe 99.3 5.9E-13 2E-17 135.5 2.3 115 370-492 153-267 (444)
227 3un9_A NLR family member X1; l 99.3 3.8E-14 1.3E-18 140.8 -6.3 134 95-228 72-224 (372)
228 2h8h_A Proto-oncogene tyrosine 99.3 3.5E-13 1.2E-17 140.7 0.6 129 359-499 383-523 (535)
229 1b6c_B TGF-B superfamily recep 99.3 2.9E-13 1E-17 133.0 -0.1 129 369-498 186-335 (342)
230 1rjb_A FL cytokine receptor; k 99.3 2E-13 7E-18 134.3 -1.3 120 370-499 212-334 (344)
231 2zv2_A Calcium/calmodulin-depe 99.3 1.9E-13 6.4E-18 131.8 -1.6 113 370-492 177-292 (298)
232 3h4j_B AMPK kdaid, SNF1-like p 99.3 1.1E-12 3.6E-17 128.7 3.8 110 370-492 148-258 (336)
233 1qpc_A LCK kinase; alpha beta 99.3 4.2E-13 1.4E-17 128.0 0.8 117 370-497 149-267 (279)
234 3f66_A Hepatocyte growth facto 99.3 7.1E-13 2.4E-17 127.6 2.4 119 370-499 168-291 (298)
235 2jii_A Serine/threonine-protei 99.3 1.7E-13 5.7E-18 135.5 -2.2 122 370-497 201-334 (352)
236 4dc2_A Protein kinase C IOTA t 99.3 6.2E-13 2.1E-17 133.1 1.8 114 370-487 193-307 (396)
237 3kfa_A Tyrosine-protein kinase 99.3 6.5E-13 2.2E-17 127.2 1.8 117 370-497 151-269 (288)
238 4e5w_A Tyrosine-protein kinase 99.3 2.8E-13 9.4E-18 130.7 -1.1 124 370-497 166-300 (302)
239 2y4i_B KSR2, HKSR2, kinase sup 99.3 2.8E-13 9.6E-18 131.8 -1.2 120 370-499 169-302 (319)
240 2w5a_A Serine/threonine-protei 99.3 7.7E-14 2.7E-18 133.0 -5.1 118 370-498 156-273 (279)
241 2pvf_A Fibroblast growth facto 99.3 4.4E-13 1.5E-17 131.5 0.1 117 370-497 197-316 (334)
242 4b99_A Mitogen-activated prote 99.3 8E-13 2.7E-17 132.1 1.9 61 371-431 199-264 (398)
243 3ll6_A Cyclin G-associated kin 99.3 7.4E-13 2.5E-17 129.6 1.6 114 370-497 178-306 (337)
244 1p4o_A Insulin-like growth fac 99.3 6E-13 2.1E-17 129.6 0.6 118 370-498 178-298 (322)
245 3lxl_A Tyrosine-protein kinase 99.3 4.6E-13 1.6E-17 130.9 -0.6 126 369-497 166-301 (327)
246 3byv_A Rhoptry kinase; malaria 99.3 6E-13 2.1E-17 132.8 0.2 103 370-492 246-359 (377)
247 1nxk_A MAP kinase-activated pr 99.2 9.7E-13 3.3E-17 132.3 1.6 117 370-492 204-321 (400)
248 3kmu_A ILK, integrin-linked ki 99.2 5.5E-13 1.9E-17 126.3 -0.4 101 389-499 167-270 (271)
249 3g33_A Cell division protein k 99.2 1.6E-12 5.5E-17 125.8 2.8 119 370-492 160-296 (308)
250 2qr7_A Ribosomal protein S6 ki 99.2 4.1E-13 1.4E-17 132.1 -1.5 117 370-492 160-277 (342)
251 3a8x_A Protein kinase C IOTA t 99.2 9.7E-13 3.3E-17 129.6 1.1 114 370-487 150-264 (345)
252 3a7i_A MST3 kinase, serine/thr 99.2 4.9E-13 1.7E-17 129.2 -1.1 113 370-493 159-271 (303)
253 4fs7_A Uncharacterized protein 99.2 7.6E-10 2.6E-14 110.9 22.1 280 70-363 71-393 (394)
254 1ob3_A PFPK5, cell division co 99.2 2.2E-12 7.5E-17 123.6 3.3 119 370-492 140-280 (288)
255 2w1i_A JAK2; chromosomal rearr 99.2 5.4E-13 1.8E-17 130.4 -1.1 126 370-499 185-322 (326)
256 3lxp_A Non-receptor tyrosine-p 99.2 3.5E-13 1.2E-17 131.2 -2.4 126 370-498 174-309 (318)
257 1o6l_A RAC-beta serine/threoni 99.2 1.5E-12 5E-17 127.8 2.0 111 370-492 145-260 (337)
258 4ejn_A RAC-alpha serine/threon 99.2 1.1E-12 3.7E-17 134.1 0.8 122 359-492 269-404 (446)
259 2a19_B Interferon-induced, dou 99.2 6.4E-13 2.2E-17 126.8 -0.8 114 370-500 162-275 (284)
260 4f9c_A Cell division cycle 7-r 99.2 1.8E-12 6.2E-17 128.1 2.3 43 389-431 205-248 (361)
261 1u5q_A Serine/threonine protei 99.2 4.5E-13 1.6E-17 132.1 -2.1 110 370-493 194-306 (348)
262 3cok_A Serine/threonine-protei 99.2 1E-12 3.4E-17 125.2 0.3 111 370-492 152-262 (278)
263 2j0j_A Focal adhesion kinase 1 99.2 1.2E-12 4E-17 139.9 0.9 128 359-497 511-649 (656)
264 3c0i_A Peripheral plasma membr 99.2 7.4E-13 2.5E-17 130.8 -0.7 111 370-492 173-286 (351)
265 3uto_A Twitchin; kinase, muscl 99.2 9.1E-13 3.1E-17 138.2 -0.1 112 371-492 298-410 (573)
266 3p1a_A MYT1 kinase, membrane-a 99.2 6.3E-13 2.1E-17 129.0 -1.2 109 369-492 196-304 (311)
267 2yfx_A Tyrosine-protein kinase 99.2 7.9E-13 2.7E-17 129.2 -0.6 117 370-497 183-302 (327)
268 3fe3_A MAP/microtubule affinit 99.2 9.8E-13 3.3E-17 128.6 -0.2 111 369-492 153-264 (328)
269 3dls_A PAS domain-containing s 99.2 1.9E-12 6.5E-17 127.0 1.9 105 370-493 170-275 (335)
270 3aln_A Dual specificity mitoge 99.2 1.5E-12 5.3E-17 127.1 1.1 115 370-492 166-285 (327)
271 3dzo_A Rhoptry kinase domain; 99.2 7.5E-13 2.6E-17 133.8 -1.4 102 370-491 251-362 (413)
272 2buj_A Serine/threonine-protei 99.2 6.3E-13 2.1E-17 129.2 -1.9 124 369-501 173-308 (317)
273 3cek_A Dual specificity protei 99.2 1.7E-12 5.9E-17 125.9 1.0 113 370-492 166-292 (313)
274 3kn6_A Ribosomal protein S6 ki 99.2 3E-13 1E-17 132.2 -4.6 119 370-492 149-270 (325)
275 1fvr_A Tyrosine-protein kinase 99.2 1.5E-12 5.2E-17 127.2 0.5 116 370-497 182-298 (327)
276 3p23_A Serine/threonine-protei 99.2 2.9E-12 9.8E-17 130.1 2.4 113 371-492 164-283 (432)
277 3fme_A Dual specificity mitoge 99.2 1.2E-12 4E-17 125.5 -0.5 113 370-492 150-266 (290)
278 3niz_A Rhodanese family protei 99.2 2.9E-12 1E-16 124.3 2.3 120 370-492 159-300 (311)
279 3zgw_A Maternal embryonic leuc 99.2 1.1E-12 3.7E-17 129.3 -0.9 111 370-492 148-260 (347)
280 2bdw_A Hypothetical protein K1 99.2 1.5E-12 5E-17 129.2 -0.0 113 370-492 171-284 (362)
281 2w4o_A Calcium/calmodulin-depe 99.2 1.1E-12 3.8E-17 129.4 -0.9 112 370-492 191-305 (349)
282 2x7f_A TRAF2 and NCK-interacti 99.2 7.7E-13 2.6E-17 129.1 -2.1 113 370-492 169-286 (326)
283 4eqm_A Protein kinase; transfe 99.2 1.9E-12 6.4E-17 124.6 0.6 118 370-497 151-273 (294)
284 3o0g_A Cell division protein k 99.2 5E-12 1.7E-16 121.3 3.4 61 370-430 141-202 (292)
285 2r5t_A Serine/threonine-protei 99.2 1.7E-12 5.7E-17 129.2 -0.0 114 370-495 179-292 (373)
286 2pmi_A Negative RE, cyclin-dep 99.2 4.4E-12 1.5E-16 123.3 3.0 63 369-431 147-210 (317)
287 2h34_A Serine/threonine-protei 99.2 1.7E-12 5.8E-17 125.8 -0.2 120 370-499 174-296 (309)
288 2clq_A Mitogen-activated prote 99.2 1.5E-12 5.1E-17 125.1 -0.9 114 370-492 163-278 (295)
289 3txo_A PKC-L, NPKC-ETA, protei 99.2 1.2E-12 4.1E-17 129.3 -1.6 106 370-487 164-269 (353)
290 3is5_A Calcium-dependent prote 99.2 2.2E-12 7.4E-17 123.5 0.1 112 370-492 167-278 (285)
291 2rku_A Serine/threonine-protei 99.2 1.3E-12 4.5E-17 125.5 -1.5 111 370-492 155-265 (294)
292 1tki_A Titin; serine kinase, m 99.2 1.5E-12 5E-17 127.0 -1.4 111 370-492 144-257 (321)
293 3hko_A Calcium/calmodulin-depe 99.2 2.2E-12 7.6E-17 126.9 -0.2 112 370-492 210-330 (345)
294 2x4f_A Myosin light chain kina 99.2 2.5E-12 8.4E-17 128.1 0.1 111 370-492 229-342 (373)
295 4agu_A Cyclin-dependent kinase 99.2 4.7E-12 1.6E-16 122.6 2.0 62 370-431 142-204 (311)
296 2eue_A Carbon catabolite derep 99.2 1.4E-12 4.9E-17 124.0 -1.7 110 370-492 152-262 (275)
297 4aaa_A Cyclin-dependent kinase 99.2 3.2E-12 1.1E-16 125.1 0.7 120 370-492 164-306 (331)
298 3tki_A Serine/threonine-protei 99.2 2.2E-12 7.4E-17 125.9 -0.6 113 370-492 145-261 (323)
299 1ua2_A CAK, cell division prot 99.2 1.2E-11 4E-16 121.9 4.5 121 370-493 152-292 (346)
300 3com_A Serine/threonine-protei 99.2 1.2E-12 4E-17 127.1 -2.7 115 369-492 164-278 (314)
301 3v5w_A G-protein coupled recep 99.2 2.2E-12 7.5E-17 135.3 -0.8 117 359-486 312-438 (689)
302 1blx_A Cyclin-dependent kinase 99.2 7.4E-12 2.5E-16 122.0 3.0 119 370-492 160-296 (326)
303 3i6u_A CDS1, serine/threonine- 99.2 2.8E-12 9.7E-17 129.8 -0.0 111 371-492 283-399 (419)
304 3fdn_A Serine/threonine-protei 99.2 2.6E-12 8.8E-17 122.5 -0.4 107 370-492 149-257 (279)
305 2i0e_A Protein kinase C-beta I 99.2 4E-12 1.4E-16 125.5 0.7 106 370-487 161-266 (353)
306 3fhr_A MAP kinase-activated pr 99.2 2.8E-12 9.4E-17 125.9 -0.5 115 370-492 171-287 (336)
307 4euu_A Serine/threonine-protei 99.2 4.8E-12 1.6E-16 123.1 1.2 124 371-498 157-308 (319)
308 3pfq_A PKC-B, PKC-beta, protei 99.2 4.2E-12 1.4E-16 136.0 0.7 117 359-487 462-587 (674)
309 2y0a_A Death-associated protei 99.2 2.8E-12 9.5E-17 125.3 -0.7 111 370-492 158-271 (326)
310 4fvq_A Tyrosine-protein kinase 99.2 1.1E-12 3.9E-17 125.5 -3.4 111 371-499 162-275 (289)
311 3a62_A Ribosomal protein S6 ki 99.2 4.1E-12 1.4E-16 124.1 0.5 111 370-492 161-276 (327)
312 2owb_A Serine/threonine-protei 99.1 1.8E-12 6E-17 127.2 -2.3 109 370-492 181-291 (335)
313 1xjd_A Protein kinase C, theta 99.1 1.6E-12 5.4E-17 128.0 -2.7 107 370-490 158-267 (345)
314 3an0_A Dual specificity mitoge 99.1 1.2E-12 4.2E-17 128.5 -3.5 110 370-492 194-310 (340)
315 3gbz_A Kinase, CMGC CDK; ssgci 99.1 3.6E-12 1.2E-16 124.7 -0.2 62 370-431 177-239 (329)
316 3kk8_A Calcium/calmodulin depe 99.1 3.2E-12 1.1E-16 122.0 -0.6 114 370-492 148-261 (284)
317 3mtl_A Cell division protein k 99.1 4E-12 1.4E-16 124.1 -0.0 120 370-492 140-281 (324)
318 3un9_A NLR family member X1; l 99.1 1.7E-12 5.8E-17 128.9 -2.7 114 263-377 127-257 (372)
319 3a99_A Proto-oncogene serine/t 99.1 4.2E-12 1.4E-16 123.7 -0.2 103 370-492 190-293 (320)
320 3e3p_A Protein kinase, putativ 99.1 7.2E-12 2.5E-16 124.0 1.4 61 370-431 172-233 (360)
321 1j1b_A Glycogen synthase kinas 99.1 9.5E-12 3.2E-16 125.9 2.3 119 370-492 197-336 (420)
322 1t4h_A Serine/threonine-protei 99.1 4.1E-12 1.4E-16 121.8 -0.3 111 370-492 172-282 (290)
323 1kob_A Twitchin; kinase, intra 99.1 2.3E-12 7.7E-17 128.9 -2.3 113 370-492 191-304 (387)
324 4fr4_A YANK1, serine/threonine 99.1 5.2E-12 1.8E-16 126.0 0.1 112 370-491 155-270 (384)
325 2r3i_A Cell division protein k 99.1 2.3E-11 8E-16 116.9 4.7 119 370-492 143-283 (299)
326 3ttj_A Mitogen-activated prote 99.1 8.8E-12 3E-16 127.7 1.7 61 370-431 204-264 (464)
327 2yab_A Death-associated protei 99.1 5.8E-12 2E-16 124.7 0.2 111 370-492 159-272 (361)
328 4eut_A Serine/threonine-protei 99.1 5.5E-12 1.9E-16 126.7 0.1 123 371-497 157-307 (396)
329 3qd2_B Eukaryotic translation 99.1 1.3E-12 4.3E-17 127.7 -4.6 110 370-492 204-325 (332)
330 3kvw_A DYRK2, dual specificity 99.1 1E-11 3.4E-16 126.1 1.9 59 370-431 242-300 (429)
331 2yex_A Serine/threonine-protei 99.1 6.9E-12 2.4E-16 119.1 0.6 113 370-492 145-261 (276)
332 3ork_A Serine/threonine protei 99.1 2.7E-12 9.2E-17 124.5 -2.6 115 370-492 156-273 (311)
333 2a2a_A Death-associated protei 99.1 9.1E-12 3.1E-16 121.3 1.0 111 370-492 159-272 (321)
334 2vgo_A Serine/threonine-protei 99.1 6.8E-12 2.3E-16 119.9 -0.1 109 370-492 154-262 (284)
335 2h6d_A 5'-AMP-activated protei 99.1 7.8E-12 2.7E-16 118.8 0.2 111 369-492 150-261 (276)
336 2vx3_A Dual specificity tyrosi 99.1 1.8E-11 6.1E-16 122.3 2.7 59 370-431 201-259 (382)
337 2y94_A 5'-AMP-activated protei 99.1 9.4E-12 3.2E-16 127.6 0.6 111 369-492 155-266 (476)
338 1vzo_A Ribosomal protein S6 ki 99.1 5.9E-12 2E-16 124.5 -0.9 114 370-493 199-322 (355)
339 2xrw_A Mitogen-activated prote 99.1 9.7E-12 3.3E-16 123.7 0.5 61 370-431 167-227 (371)
340 2dyl_A Dual specificity mitoge 99.1 6.8E-12 2.3E-16 121.8 -0.6 114 370-492 165-283 (318)
341 3uc3_A Serine/threonine-protei 99.1 9.9E-12 3.4E-16 123.2 0.4 114 370-492 158-274 (361)
342 3f3z_A Calcium/calmodulin-depe 99.1 6.2E-12 2.1E-16 119.6 -1.1 110 370-492 149-261 (277)
343 4gt6_A Cell surface protein; l 99.1 8.1E-09 2.8E-13 103.4 21.6 275 86-370 54-369 (394)
344 1q8y_A SR protein kinase; tran 99.1 1.2E-11 4E-16 123.0 0.8 60 370-432 178-237 (373)
345 2pml_X PFPK7, Ser/Thr protein 99.1 1.2E-11 4.2E-16 121.7 0.9 118 370-492 192-322 (348)
346 2rio_A Serine/threonine-protei 99.1 5.4E-12 1.9E-16 128.3 -1.8 114 370-492 168-295 (434)
347 3c4z_A Rhodopsin kinase; Ser/T 99.1 7.4E-12 2.5E-16 130.0 -0.8 110 370-487 329-438 (543)
348 2ac3_A MAP kinase-interacting 99.1 1.2E-11 4.2E-16 120.0 0.6 119 370-492 154-295 (316)
349 2vwi_A Serine/threonine-protei 99.1 1.5E-11 5.3E-16 118.3 1.2 117 370-492 161-287 (303)
350 2y7j_A Phosphorylase B kinase 99.1 9.9E-12 3.4E-16 123.4 -0.2 111 370-492 240-359 (365)
351 2wtk_C Serine/threonine-protei 99.1 9.9E-12 3.4E-16 119.9 -0.3 113 369-493 148-264 (305)
352 1fot_A TPK1 delta, CAMP-depend 99.1 1.1E-11 3.6E-16 120.7 -0.1 107 370-491 146-257 (318)
353 4e7w_A Glycogen synthase kinas 99.1 2.3E-11 7.8E-16 122.0 2.3 119 370-492 182-321 (394)
354 3llt_A Serine/threonine kinase 99.1 5.5E-12 1.9E-16 124.9 -2.3 60 369-431 201-260 (360)
355 2jam_A Calcium/calmodulin-depe 99.1 1.3E-11 4.3E-16 119.2 0.3 112 370-492 149-261 (304)
356 3lm5_A Serine/threonine-protei 99.1 6E-12 2.1E-16 122.9 -2.0 113 370-492 174-287 (327)
357 3rp9_A Mitogen-activated prote 99.1 3.4E-11 1.1E-15 123.4 3.3 60 370-429 196-283 (458)
358 1wak_A Serine/threonine-protei 99.1 2.7E-11 9.1E-16 121.4 2.3 60 370-432 236-295 (397)
359 3rgf_A Cyclin-dependent kinase 99.1 6.9E-12 2.3E-16 126.4 -2.1 62 370-431 172-237 (405)
360 3e7e_A HBUB1, BUB1A, mitotic c 99.1 2.7E-11 9.2E-16 120.2 2.2 114 368-497 221-337 (365)
361 1rdq_E PKA C-alpha, CAMP-depen 99.1 1E-11 3.5E-16 122.5 -0.9 108 370-492 181-293 (350)
362 1x8b_A WEE1HU, WEE1-like prote 99.1 1.6E-11 5.6E-16 117.1 0.5 105 370-492 174-279 (289)
363 4gt6_A Cell surface protein; l 99.1 3.7E-08 1.3E-12 98.6 25.0 285 72-370 66-390 (394)
364 3nsz_A CK II alpha, casein kin 99.1 1.1E-11 3.8E-16 121.0 -1.0 61 370-431 171-232 (330)
365 3n9x_A Phosphotransferase; mal 99.1 3.7E-11 1.3E-15 122.0 2.9 62 370-431 169-253 (432)
366 3oz6_A Mitogen-activated prote 99.1 6.6E-12 2.2E-16 125.8 -2.7 62 370-431 149-232 (388)
367 3mi9_A Cell division protein k 99.1 5E-11 1.7E-15 117.5 3.7 62 370-431 164-230 (351)
368 3eqc_A Dual specificity mitoge 99.1 7.4E-12 2.5E-16 124.0 -2.5 60 370-431 172-231 (360)
369 3eb0_A Putative uncharacterize 99.1 3.3E-11 1.1E-15 120.4 2.1 119 370-492 182-321 (383)
370 2iwi_A Serine/threonine-protei 99.0 2E-11 7E-16 118.2 0.4 103 370-492 180-283 (312)
371 3qyz_A Mitogen-activated prote 99.0 1.9E-11 6.5E-16 121.3 0.1 62 370-431 168-233 (364)
372 2j7t_A Serine/threonine-protei 99.0 3.7E-12 1.3E-16 122.7 -5.2 114 370-492 157-275 (302)
373 2acx_A G protein-coupled recep 99.0 1.4E-11 4.7E-16 128.5 -1.4 112 370-492 326-444 (576)
374 4aw2_A Serine/threonine-protei 99.0 2.3E-11 8E-16 123.3 -0.1 114 370-492 215-338 (437)
375 1z57_A Dual specificity protei 99.0 2.7E-11 9.2E-16 118.5 0.3 60 369-431 176-235 (339)
376 3gni_B Strad alpha; kinase fol 99.0 1.8E-11 6.1E-16 122.6 -1.0 62 371-432 169-239 (389)
377 4exu_A Mitogen-activated prote 99.0 3.4E-11 1.2E-15 119.8 0.6 59 370-431 184-243 (371)
378 3mwu_A Calmodulin-domain prote 99.0 4.1E-11 1.4E-15 123.7 1.1 113 370-492 164-276 (486)
379 2eu9_A Dual specificity protei 99.0 3E-11 1E-15 119.1 -0.0 59 370-431 182-240 (355)
380 3bhy_A Death-associated protei 99.0 2.9E-11 1E-15 115.2 -0.1 111 370-492 152-265 (283)
381 3rw6_A Nuclear RNA export fact 99.0 5.2E-13 1.8E-17 125.1 -12.1 139 57-207 76-236 (267)
382 2b9h_A MAP kinase FUS3, mitoge 99.0 2.6E-11 8.7E-16 119.7 -0.7 62 370-431 152-224 (353)
383 3coi_A Mitogen-activated prote 99.0 2E-11 6.9E-16 120.5 -1.7 117 370-492 166-305 (353)
384 1cm8_A Phosphorylated MAP kina 99.0 1.5E-11 5.1E-16 122.2 -2.6 117 370-492 168-307 (367)
385 2ycf_A Serine/threonine-protei 99.0 9.9E-12 3.4E-16 121.1 -4.1 114 370-492 157-274 (322)
386 2vd5_A DMPK protein; serine/th 99.0 3.3E-11 1.1E-15 121.3 -0.5 113 370-492 202-327 (412)
387 3lij_A Calcium/calmodulin depe 99.0 3.7E-11 1.3E-15 124.3 -0.2 110 371-492 180-291 (494)
388 2i6l_A Mitogen-activated prote 99.0 3.9E-11 1.3E-15 116.4 0.1 120 370-492 161-305 (320)
389 2fst_X Mitogen-activated prote 99.0 3.6E-11 1.2E-15 119.4 -0.6 59 370-431 172-231 (367)
390 3pg1_A Mitogen-activated prote 99.0 7.5E-11 2.6E-15 116.8 1.4 61 370-431 174-235 (362)
391 3v8s_A RHO-associated protein 99.0 1.8E-11 6.3E-16 123.1 -3.5 111 370-492 208-329 (410)
392 2wei_A Calmodulin-domain prote 99.0 5E-11 1.7E-15 114.0 -0.4 113 370-492 164-276 (287)
393 3qa8_A MGC80376 protein; kinas 99.0 3.3E-10 1.1E-14 119.6 5.7 115 371-489 165-294 (676)
394 1phk_A Phosphorylase kinase; g 99.0 2.8E-11 9.6E-16 116.3 -2.3 111 370-492 164-283 (298)
395 3q5i_A Protein kinase; CDPK, m 99.0 5.1E-11 1.7E-15 123.6 -0.5 110 370-492 189-301 (504)
396 3nyv_A Calmodulin-domain prote 99.0 2.7E-11 9.3E-16 125.0 -2.8 113 370-492 169-281 (484)
397 2ra8_A Uncharacterized protein 98.9 1.1E-10 3.9E-15 114.9 -0.7 180 69-252 106-320 (362)
398 1zy4_A Serine/threonine-protei 98.9 1.2E-10 4E-15 112.0 -1.9 112 370-492 156-283 (303)
399 2pzi_A Probable serine/threoni 98.8 5.7E-10 2E-14 119.9 0.3 104 370-496 221-325 (681)
400 4h09_A Hypothetical leucine ri 98.8 1.9E-06 6.7E-11 85.4 24.5 284 71-368 47-343 (379)
401 2ra8_A Uncharacterized protein 98.7 4.7E-09 1.6E-13 103.3 3.2 35 95-129 107-149 (362)
402 3rw6_A Nuclear RNA export fact 98.6 1.6E-09 5.5E-14 101.4 -3.3 105 91-197 137-257 (267)
403 3m2w_A MAP kinase-activated pr 98.6 1.1E-08 3.8E-13 98.2 2.5 79 406-492 174-256 (299)
404 3uqc_A Probable conserved tran 98.6 7.3E-09 2.5E-13 98.9 0.9 116 358-499 148-265 (286)
405 1io0_A Tropomodulin; LRR prote 98.5 8.9E-09 3E-13 91.5 -0.8 114 91-204 32-164 (185)
406 4h09_A Hypothetical leucine ri 98.5 2.2E-05 7.7E-10 77.7 23.4 275 71-359 70-357 (379)
407 1io0_A Tropomodulin; LRR prote 98.4 2.2E-08 7.4E-13 89.0 -1.6 95 110-204 27-136 (185)
408 3rfe_A Platelet glycoprotein I 98.0 1E-05 3.5E-10 66.9 6.2 68 313-382 11-79 (130)
409 3e4g_A ATP synthase subunit S, 97.8 5E-06 1.7E-10 72.1 1.2 91 287-377 62-158 (176)
410 3e4g_A ATP synthase subunit S, 97.7 6.1E-06 2.1E-10 71.6 0.7 82 96-177 62-149 (176)
411 4azs_A Methyltransferase WBDD; 97.1 4.7E-05 1.6E-09 79.6 -1.9 71 358-429 358-437 (569)
412 1pgv_A TMD-1, tropomodulin TMD 97.1 9.9E-05 3.4E-09 65.2 0.3 112 91-202 37-168 (197)
413 3rfe_A Platelet glycoprotein I 96.9 0.0016 5.5E-08 53.5 6.7 36 120-155 32-67 (130)
414 2vuw_A Serine/threonine-protei 96.9 7.6E-05 2.6E-09 72.5 -1.7 56 370-431 222-278 (336)
415 1pgv_A TMD-1, tropomodulin TMD 96.5 0.0011 3.9E-08 58.4 3.0 88 283-370 67-169 (197)
416 3en9_A Glycoprotease, O-sialog 88.2 0.0092 3.1E-07 61.7 -7.6 61 370-430 469-538 (540)
417 2lz0_A Uncharacterized protein 48.1 57 0.0019 24.5 6.8 37 113-150 14-50 (100)
418 2lz0_A Uncharacterized protein 43.6 48 0.0017 24.9 5.7 44 86-130 11-54 (100)
419 3ox7_P MH027; urokinase-type p 29.2 19 0.00066 18.2 0.8 9 57-65 6-14 (23)
420 1kdl_A YOPD protein; yersinia, 26.2 47 0.0016 17.9 2.0 14 487-500 4-17 (26)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.4e-48 Score=423.35 Aligned_cols=346 Identities=26% Similarity=0.430 Sum_probs=281.7
Q ss_pred HHhhccCCCHHHHHHHHHHHhhcCcCCCCCCCCCCCCCCCCCCCCCCCccceeeeCCCCCEEEEEecCCCCcee---cCc
Q 010736 12 FLVAVSSETNEEADALLKWKASLQIHNRSLLSSWIKDTSNVSSKISPCAWSGISCNDAGRVINISLRGVGLKGK---LHA 88 (502)
Q Consensus 12 ~~~~~~~~~~~d~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~~C~W~Gv~C~~~~~v~~L~L~~~~l~g~---l~~ 88 (502)
|+.+++++.++|++||++||+++. ||. .+++|..+ .+||.|.||+|+ .++|+.|+|+++++.|. +++
T Consensus 2 ~~~~~~~~~~~~~~all~~k~~~~-~~~-~l~~W~~~-------~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~ 71 (768)
T 3rgz_A 2 FQASPSQSLYREIHQLISFKDVLP-DKN-LLPDWSSN-------KNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSS 71 (768)
T ss_dssp ------CCHHHHHHHHHHHHTTCS-CTT-SSTTCCTT-------SCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHH
T ss_pred CcCccccCCHHHHHHHHHHHhhCC-Ccc-cccCCCCC-------CCCcCCcceEEC-CCcEEEEECCCCCcCCccCccCh
Confidence 444556667889999999999997 566 89999744 689999999998 68999999999999997 553
Q ss_pred ----------------------ccCCCCCCCCEEECCCCcccccCCc--cCcCCCCCCEEEccCCcCcCCCCccc-CCCC
Q 010736 89 ----------------------FSFSSFPHLAYLDLRDNKLFGTIPP--QISNLTNLSILSLGGNQFSGNIPHEV-GLMS 143 (502)
Q Consensus 89 ----------------------~~~~~l~~L~~L~Ls~N~l~g~~p~--~l~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~ 143 (502)
..|+.+++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .+++
T Consensus 72 ~l~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~ 151 (768)
T 3rgz_A 72 SLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLN 151 (768)
T ss_dssp HTTTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCT
T ss_pred hHhccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCC
Confidence 3488889999999999999998888 89999999999999999998888776 7899
Q ss_pred CCcEEEccCCcCcccCCcc---cCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCcc
Q 010736 144 HLKILYIDSNQLDGSIPLE---VGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISIL 220 (502)
Q Consensus 144 ~L~~L~Ls~N~l~~~~p~~---~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 220 (502)
+|++|++++|++++..|.. +.++++|++|++++|++++.+|. ..+++|++|++++|.+++.+|. ++++++|++|
T Consensus 152 ~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L 228 (768)
T 3rgz_A 152 SLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHL 228 (768)
T ss_dssp TCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEE
T ss_pred CCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEE
Confidence 9999999999999888776 78888888888888888876653 7788888888988888887776 8888889999
Q ss_pred ccccccccCcccccccCCCCCcEEEeeCccccccCCCCCccccccEEECcCCcCcccCCccccCC-CCCcEEEccCCccc
Q 010736 221 SLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRG-GALQIFTVSENRFQ 299 (502)
Q Consensus 221 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~-~~L~~L~ls~n~l~ 299 (502)
++++|++++.+|..++++++|++|++++|.+.+.+|.. ....|++|++++|++++.+|..+... ++|+.|++++|.++
T Consensus 229 ~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~-~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~ 307 (768)
T 3rgz_A 229 DISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFY 307 (768)
T ss_dssp ECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC-CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEE
T ss_pred ECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc-ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCC
Confidence 99998888888888888888888888888888777665 44678888888888887777777665 78888888888888
Q ss_pred cccCcccccCCCCcEEeCCCCccccccCcc-cCCCCCCcEEEccCcccccccCccccCCC-CCCeeeecCCccc
Q 010736 300 GTIPKSLRNCTSLIRVRLDGNNLTGNISKA-FGIYPNLTFIDLSRNNFYGEISSNFGECP-KLGALNISRNNIT 371 (502)
Q Consensus 300 ~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~-~L~~L~l~~N~l~ 371 (502)
+.+|..+..+++|++|++++|++++.+|.. +..+++|++|++++|++.+.+|..+..++ +|++|++++|++.
T Consensus 308 ~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~ 381 (768)
T 3rgz_A 308 GAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFS 381 (768)
T ss_dssp ECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEE
T ss_pred CccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcC
Confidence 778888888888888888888887776654 77777888888888877777777776665 6777777666654
No 2
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.6e-46 Score=399.47 Aligned_cols=337 Identities=20% Similarity=0.332 Sum_probs=254.4
Q ss_pred HHHHHHHHHHHhhcCcCCCCCC-------CCCCCCCCCCCCCCCCCcc---ceeeeCCCCCEEEEEecCCCCceecCccc
Q 010736 21 NEEADALLKWKASLQIHNRSLL-------SSWIKDTSNVSSKISPCAW---SGISCNDAGRVINISLRGVGLKGKLHAFS 90 (502)
Q Consensus 21 ~~d~~aLl~~k~~~~~~~~~~l-------~~W~~~~~~~~~~~~~C~W---~Gv~C~~~~~v~~L~L~~~~l~g~l~~~~ 90 (502)
..|+.||.++|.+++.+++... .+|..+ .++|.| .||+|+..++|+.|+|+++++.|.+|+.
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-------~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~- 100 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-------KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDA- 100 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-------SCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGG-
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-------CCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChH-
Confidence 4699999999999875443322 267644 689999 9999988799999999999999999985
Q ss_pred CCCCCCCCEEECCCC-----------------------------------------------------------------
Q 010736 91 FSSFPHLAYLDLRDN----------------------------------------------------------------- 105 (502)
Q Consensus 91 ~~~l~~L~~L~Ls~N----------------------------------------------------------------- 105 (502)
++++++|++|+|++|
T Consensus 101 l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 180 (636)
T 4eco_A 101 IGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSR 180 (636)
T ss_dssp GGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCC
T ss_pred HhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccc
Confidence 999999999999988
Q ss_pred -------------cccccCCccCcCCCCCCEEEccCCcCcCC-----------------CCcccC--CCCCCcEEEccCC
Q 010736 106 -------------KLFGTIPPQISNLTNLSILSLGGNQFSGN-----------------IPHEVG--LMSHLKILYIDSN 153 (502)
Q Consensus 106 -------------~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~-----------------~p~~l~--~l~~L~~L~Ls~N 153 (502)
+++| +|..|+++++|++|+|++|.++|. +|..++ ++++|++|+|++|
T Consensus 181 ~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n 259 (636)
T 4eco_A 181 ITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNC 259 (636)
T ss_dssp CCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECC
T ss_pred cchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCC
Confidence 4456 889999999999999999999986 999999 9999999999999
Q ss_pred cCcccCCcccCCCCCCcEEEcccCc-ccc-cCCcCCCCC------CCCCeEEcccccccccCCc--cCcCCccCCccccc
Q 010736 154 QLDGSIPLEVGQLSSMVELALFSNN-LNG-SVPHSLGNL------TQISMLFLHDNSFSGFIPP--DIGNLKSISILSLA 223 (502)
Q Consensus 154 ~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~ls 223 (502)
++.+.+|..|+++++|++|++++|+ ++| .+|..++.+ ++|++|++++|+++ .+|. .++.+++|++|+++
T Consensus 260 ~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~ 338 (636)
T 4eco_A 260 PNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECL 338 (636)
T ss_dssp TTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECC
T ss_pred cCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCc
Confidence 9999999999999999999999998 988 788777665 78888888888888 6777 77888888888888
Q ss_pred cccccCcccccccCCCCCcEEEeeCccccccCCCCCcc-cc-ccEEECcCCcCcccCCccccCCC--CCcEEEccCCccc
Q 010736 224 INQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LV-LTKLSLDDNHFTSYLPQNICRGG--ALQIFTVSENRFQ 299 (502)
Q Consensus 224 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~-L~~L~ls~N~l~~~~~~~~~~~~--~L~~L~ls~n~l~ 299 (502)
+|+++|.+| .++.+++|+.|++++|+++ .+|..+.. .. |++|++++|+++ .+|..+.... +|+.|++++|.++
T Consensus 339 ~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~ 415 (636)
T 4eco_A 339 YNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIG 415 (636)
T ss_dssp SCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTT
T ss_pred CCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCC
Confidence 888887777 7777777777777777776 66665555 45 777777777766 4555555443 6666666666666
Q ss_pred cccCcccc-------cCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCc-cccCC-------CCCCeee
Q 010736 300 GTIPKSLR-------NCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISS-NFGEC-------PKLGALN 364 (502)
Q Consensus 300 ~~~~~~l~-------~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~~-------~~L~~L~ 364 (502)
+..|..+. .+++|+.|++++|++++..+..+..+++|++|+|++|+++ .+|. .+... ++|++|+
T Consensus 416 ~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~ 494 (636)
T 4eco_A 416 SVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSID 494 (636)
T ss_dssp TTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEE
T ss_pred CcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEE
Confidence 66665555 5556666666666666333333344555666666666555 3332 22211 1555555
Q ss_pred ecCCccc
Q 010736 365 ISRNNIT 371 (502)
Q Consensus 365 l~~N~l~ 371 (502)
+++|++.
T Consensus 495 Ls~N~l~ 501 (636)
T 4eco_A 495 LRFNKLT 501 (636)
T ss_dssp CCSSCCC
T ss_pred CcCCcCC
Confidence 5555554
No 3
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5.9e-45 Score=356.45 Aligned_cols=292 Identities=27% Similarity=0.486 Sum_probs=242.9
Q ss_pred CCCHHHHHHHHHHHhhcCcCCCCCCCCCCCCCCCCCCCCCCCc--cceeeeCCC---CCEEEEEecCCCCce--ecCccc
Q 010736 18 SETNEEADALLKWKASLQIHNRSLLSSWIKDTSNVSSKISPCA--WSGISCNDA---GRVINISLRGVGLKG--KLHAFS 90 (502)
Q Consensus 18 ~~~~~d~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~~C~--W~Gv~C~~~---~~v~~L~L~~~~l~g--~l~~~~ 90 (502)
.+.++|++||++||+++.+ |. .+++|..+ .+||. |.||+|+.. ++|+.|+|+++++.| .+|..
T Consensus 2 ~c~~~~~~aL~~~k~~~~~-~~-~l~~W~~~-------~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~- 71 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGN-PT-TLSSWLPT-------TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSS- 71 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTC-CG-GGTTCCTT-------SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGG-
T ss_pred CCCHHHHHHHHHHHHhcCC-cc-cccCCCCC-------CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChh-
Confidence 4678899999999999964 44 78899654 57998 999999864 799999999999999 88875
Q ss_pred CCCCCCCCEEECCC-CcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCC
Q 010736 91 FSSFPHLAYLDLRD-NKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSM 169 (502)
Q Consensus 91 ~~~l~~L~~L~Ls~-N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 169 (502)
|+++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|+++++|++|++++|++++.+|..+..+++|
T Consensus 72 l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 151 (313)
T 1ogq_A 72 LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNL 151 (313)
T ss_dssp GGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTC
T ss_pred HhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCC
Confidence 99999999999995 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEcccCcccccCCcCCCCCC-CCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeC
Q 010736 170 VELALFSNNLNGSVPHSLGNLT-QISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVY 248 (502)
Q Consensus 170 ~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 248 (502)
++|++++|++++.+|..++.++ +|++|++++|++++.+|..+..++ |+.|++++|++++..|..+..+++|+.|++++
T Consensus 152 ~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 230 (313)
T 1ogq_A 152 VGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAK 230 (313)
T ss_dssp CEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCS
T ss_pred CeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCC
Confidence 9999999999999999999998 999999999999999999999887 99999999999988899999999999999999
Q ss_pred ccccccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCc
Q 010736 249 NNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISK 328 (502)
Q Consensus 249 N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 328 (502)
|.+++.+|. +..+++|+.|++++|++++.+|..+..+++|+.|++++|++++.+|.
T Consensus 231 N~l~~~~~~------------------------~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 286 (313)
T 1ogq_A 231 NSLAFDLGK------------------------VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp SEECCBGGG------------------------CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred CceeeecCc------------------------ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCC
Confidence 988765443 22334455555555555555555555555555555555555555544
Q ss_pred ccCCCCCCcEEEccCcc
Q 010736 329 AFGIYPNLTFIDLSRNN 345 (502)
Q Consensus 329 ~~~~l~~L~~L~Ls~N~ 345 (502)
. ..+++|+.+++++|.
T Consensus 287 ~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 287 G-GNLQRFDVSAYANNK 302 (313)
T ss_dssp S-TTGGGSCGGGTCSSS
T ss_pred C-ccccccChHHhcCCC
Confidence 3 455555555555554
No 4
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5.2e-44 Score=390.04 Aligned_cols=338 Identities=20% Similarity=0.309 Sum_probs=250.8
Q ss_pred CCCHHHHHHHHHHHhhcCcCCCCCCCCCCCCCCCCCCCCCC--Ccc------------ceeeeCCCCCEEEEEecCCCCc
Q 010736 18 SETNEEADALLKWKASLQIHNRSLLSSWIKDTSNVSSKISP--CAW------------SGISCNDAGRVINISLRGVGLK 83 (502)
Q Consensus 18 ~~~~~d~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~~--C~W------------~Gv~C~~~~~v~~L~L~~~~l~ 83 (502)
++...|+.||++||+++.+ | +|+.+..+ ...+| |.| .||+|+..++|+.|+|+++++.
T Consensus 265 ~~~~~d~~ALl~~k~~l~~-~-----~W~~~~~~--~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~ 336 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDG-K-----NWRYYSGT--INNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAK 336 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTG-G-----GCCCCCSS--CSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCE
T ss_pred ccchHHHHHHHHHHHHcCC-C-----CCCcCCCc--ccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCC
Confidence 3445799999999999964 3 78765211 01356 999 9999997799999999999999
Q ss_pred eecCcccCCCCCCCCEEEC-CCCccccc----------------------------------------------------
Q 010736 84 GKLHAFSFSSFPHLAYLDL-RDNKLFGT---------------------------------------------------- 110 (502)
Q Consensus 84 g~l~~~~~~~l~~L~~L~L-s~N~l~g~---------------------------------------------------- 110 (502)
|.+|+. |+++++|++|+| ++|.++|.
T Consensus 337 G~ip~~-l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~ 415 (876)
T 4ecn_A 337 GRVPDA-IGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMK 415 (876)
T ss_dssp EEECGG-GGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSC
T ss_pred CcCchH-HhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccc
Confidence 999986 999999999999 77766554
Q ss_pred ------------------------CCccCcCCCCCCEEEccCCcCcC-----------------CCCcccC--CCCCCcE
Q 010736 111 ------------------------IPPQISNLTNLSILSLGGNQFSG-----------------NIPHEVG--LMSHLKI 147 (502)
Q Consensus 111 ------------------------~p~~l~~l~~L~~L~Ls~N~l~~-----------------~~p~~l~--~l~~L~~ 147 (502)
+|..|+++++|++|+|++|+|+| .+|..++ ++++|++
T Consensus 416 ~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~ 495 (876)
T 4ecn_A 416 PIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTD 495 (876)
T ss_dssp CCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred ccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCE
Confidence 88899999999999999999998 3899988 9999999
Q ss_pred EEccCCcCcccCCcccCCCCCCcEEEcccCc-ccc-cCCcCCCCCC-------CCCeEEcccccccccCCc--cCcCCcc
Q 010736 148 LYIDSNQLDGSIPLEVGQLSSMVELALFSNN-LNG-SVPHSLGNLT-------QISMLFLHDNSFSGFIPP--DIGNLKS 216 (502)
Q Consensus 148 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~--~~~~l~~ 216 (502)
|+|++|++.+.+|..|+++++|+.|++++|+ ++| .+|..++.++ +|++|++++|+++ .+|. .++++++
T Consensus 496 L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~ 574 (876)
T 4ecn_A 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVK 574 (876)
T ss_dssp EEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTT
T ss_pred EECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCC
Confidence 9999999999999999999999999999998 888 7776555444 8888888888888 6777 7888888
Q ss_pred CCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCcc-cc-ccEEECcCCcCcccCCccccCCCC--CcEEE
Q 010736 217 ISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LV-LTKLSLDDNHFTSYLPQNICRGGA--LQIFT 292 (502)
Q Consensus 217 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~-L~~L~ls~N~l~~~~~~~~~~~~~--L~~L~ 292 (502)
|+.|++++|+++ .+| .++.+++|+.|++++|+++ .+|..+.. .. |+.|++++|+++ .+|..+..... |+.|+
T Consensus 575 L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~ 650 (876)
T 4ecn_A 575 LGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVD 650 (876)
T ss_dssp CCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEE
T ss_pred CCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEE
Confidence 888888888888 677 7788888888888888887 67766655 45 777777777777 45655554433 66666
Q ss_pred ccCCccccccC----------------------------ccc-ccCCCCcEEeCCCCccccccCccc-CCC-------CC
Q 010736 293 VSENRFQGTIP----------------------------KSL-RNCTSLIRVRLDGNNLTGNISKAF-GIY-------PN 335 (502)
Q Consensus 293 ls~n~l~~~~~----------------------------~~l-~~l~~L~~L~l~~N~l~~~~~~~~-~~l-------~~ 335 (502)
+++|++++.+| ..+ ..+++|+.|+|++|+++ .+|..+ ... ++
T Consensus 651 Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~ 729 (876)
T 4ecn_A 651 FSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYL 729 (876)
T ss_dssp CCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGG
T ss_pred CcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCC
Confidence 66666655433 221 23445555555555555 222222 111 15
Q ss_pred CcEEEccCcccccccCcccc--CCCCCCeeeecCCccc
Q 010736 336 LTFIDLSRNNFYGEISSNFG--ECPKLGALNISRNNIT 371 (502)
Q Consensus 336 L~~L~Ls~N~l~~~~~~~~~--~~~~L~~L~l~~N~l~ 371 (502)
|+.|+|++|+++ .+|..+. .+++|++|++++|++.
T Consensus 730 L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~ 766 (876)
T 4ecn_A 730 LTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFS 766 (876)
T ss_dssp CCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCS
T ss_pred ccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCC
Confidence 555555555555 4444444 5555555555555554
No 5
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.3e-40 Score=342.94 Aligned_cols=319 Identities=21% Similarity=0.229 Sum_probs=272.8
Q ss_pred CCCccce--eeeCCC---------CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccC-CccCcCCCCCCEE
Q 010736 57 SPCAWSG--ISCNDA---------GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTI-PPQISNLTNLSIL 124 (502)
Q Consensus 57 ~~C~W~G--v~C~~~---------~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~-p~~l~~l~~L~~L 124 (502)
+.|.|.+ |.|+.. .+++.|+|+++.+++..+.. |+++++|++|+|++|.+.+.+ |..|.++++|++|
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~-~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L 84 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETS-FSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIIL 84 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTT-TSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhH-hccCccccEEECcCCcccceECcccccccccCCEE
Confidence 4566666 888742 36899999999999766654 999999999999999998655 5679999999999
Q ss_pred EccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcc--cCCCCCCcEEEcccCcccccCCcC-CCCCCCCCeEEcccc
Q 010736 125 SLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLE--VGQLSSMVELALFSNNLNGSVPHS-LGNLTQISMLFLHDN 201 (502)
Q Consensus 125 ~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N 201 (502)
+|++|++++..|..|+++++|++|++++|++++..|.. +..+++|++|++++|++++..|.. +.++++|++|++++|
T Consensus 85 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n 164 (455)
T 3v47_A 85 KLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFN 164 (455)
T ss_dssp ECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTC
T ss_pred eCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCC
Confidence 99999999999999999999999999999999866655 999999999999999999888876 889999999999999
Q ss_pred cccccCCccCcCC----------------------------------ccCCccccccccccCcccccccC----------
Q 010736 202 SFSGFIPPDIGNL----------------------------------KSISILSLAINQFSGPIPLSLGN---------- 237 (502)
Q Consensus 202 ~l~~~~p~~~~~l----------------------------------~~L~~L~ls~N~l~~~~p~~~~~---------- 237 (502)
++++..+..+..+ ++|++|++++|++++..|..+..
T Consensus 165 ~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L 244 (455)
T 3v47_A 165 KVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSL 244 (455)
T ss_dssp CBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEE
T ss_pred cccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeE
Confidence 9998888776554 56888888888776655443321
Q ss_pred -----------------------------CCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCC
Q 010736 238 -----------------------------LTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGA 287 (502)
Q Consensus 238 -----------------------------l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~ 287 (502)
.++|+.|++++|.+++..|..+.. ..|++|++++|++++..|..+..+++
T Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 324 (455)
T 3v47_A 245 ILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTH 324 (455)
T ss_dssp ECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred eeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCccc
Confidence 257888888888888877877766 68999999999999888888888999
Q ss_pred CcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecC
Q 010736 288 LQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISR 367 (502)
Q Consensus 288 L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~ 367 (502)
|+.|++++|.+++..+..+..+++|++|++++|++++..+..+..+++|++|++++|++++..+..+..+++|++|++++
T Consensus 325 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 404 (455)
T 3v47_A 325 LLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHT 404 (455)
T ss_dssp CCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccC
Confidence 99999999999888788888899999999999999888888899999999999999999877777788899999999999
Q ss_pred CccccccCc
Q 010736 368 NNITGDFGI 376 (502)
Q Consensus 368 N~l~~dfGl 376 (502)
|++.|++..
T Consensus 405 N~l~~~~~~ 413 (455)
T 3v47_A 405 NPWDCSCPR 413 (455)
T ss_dssp SCBCCCTTT
T ss_pred CCcccCCCc
Confidence 999999873
No 6
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.6e-41 Score=367.79 Aligned_cols=234 Identities=33% Similarity=0.503 Sum_probs=142.5
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCC-CCCEEEccCCcCcCCCCcccCC--CCCCc
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLT-NLSILSLGGNQFSGNIPHEVGL--MSHLK 146 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~--l~~L~ 146 (502)
..++.|++++|.+.|.+|...|..+++|++|++++|.++|.+|..+.+++ +|++|++++|.+++.+|..+.. +++|+
T Consensus 318 ~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~ 397 (768)
T 3rgz_A 318 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 397 (768)
T ss_dssp TTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCC
T ss_pred CCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCcc
Confidence 45778888888888888776678888888888888888777777776665 6666666666666655555544 55555
Q ss_pred EEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCcccccccc
Q 010736 147 ILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQ 226 (502)
Q Consensus 147 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 226 (502)
+|++++|++++.+|..+..+++|++|++++|++++.+|..++.+++|++|++++|.+++.+|..+..+++|++|++++|+
T Consensus 398 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 477 (768)
T 3rgz_A 398 ELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFND 477 (768)
T ss_dssp EEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred EEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCc
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred ccCcccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccC
Q 010736 227 FSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIP 303 (502)
Q Consensus 227 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~ 303 (502)
+++.+|..+.++++|+.|++++|++++.+|..+.. ..|++|++++|++++.+|..++.+++|+.|++++|+++|.+|
T Consensus 478 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip 555 (768)
T 3rgz_A 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCC
T ss_pred ccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCC
Confidence 55555555555555555555555555555554444 445555555555555555555555555555555555544444
No 7
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.2e-40 Score=338.68 Aligned_cols=322 Identities=20% Similarity=0.197 Sum_probs=295.3
Q ss_pred ccceeeeCCC----------CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCC
Q 010736 60 AWSGISCNDA----------GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGN 129 (502)
Q Consensus 60 ~W~Gv~C~~~----------~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N 129 (502)
.|..|.|... ..++.|+|+++++++..+. .|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQD-EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTT-TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHh-HccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 4788999742 3688999999999976555 4999999999999999999999999999999999999999
Q ss_pred cCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCc
Q 010736 130 QFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPP 209 (502)
Q Consensus 130 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 209 (502)
++++..+..|.++++|++|+|++|++++..|..|..+++|++|++++|.+++..|..|..+++|++|++++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 99977667789999999999999999999999999999999999999999999899999999999999999999987777
Q ss_pred cCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCC
Q 010736 210 DIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGAL 288 (502)
Q Consensus 210 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L 288 (502)
.+..+++|+.|++++|.+++..+..|..+++|+.|++++|.+.+.+|..... ..|+.|++++|++++..+..+..+++|
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYL 250 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTC
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCcccc
Confidence 8999999999999999999888889999999999999999887777665444 689999999999998666788999999
Q ss_pred cEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCC
Q 010736 289 QIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRN 368 (502)
Q Consensus 289 ~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N 368 (502)
+.|++++|.+++..+..+..+++|+.|++++|++++..+..|..+++|+.|+|++|++++..+..+..+++|++|++++|
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 330 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC
Confidence 99999999999888888999999999999999999999999999999999999999999888888899999999999999
Q ss_pred ccccccCcccccCC
Q 010736 369 NITGDFGIAKFLKP 382 (502)
Q Consensus 369 ~l~~dfGl~~ll~~ 382 (502)
++.|||.+.++...
T Consensus 331 ~l~c~c~~~~~~~~ 344 (477)
T 2id5_A 331 PLACDCRLLWVFRR 344 (477)
T ss_dssp CEECSGGGHHHHTT
T ss_pred CccCccchHhHHhh
Confidence 99999998877643
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.5e-37 Score=331.67 Aligned_cols=150 Identities=26% Similarity=0.308 Sum_probs=119.1
Q ss_pred CCCCccc----eeeeCC----------CCCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCC
Q 010736 56 ISPCAWS----GISCND----------AGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNL 121 (502)
Q Consensus 56 ~~~C~W~----Gv~C~~----------~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L 121 (502)
.+||.|. .+.|.. ..+++.|+|+++.+++..+. .|.++++|++|+|++|++++..|..|.++++|
T Consensus 4 ~~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L 82 (606)
T 3vq2_A 4 LNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSY-SFSNFSELQWLDLSRCEIETIEDKAWHGLHHL 82 (606)
T ss_dssp --CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECTTCCCCEECTTTTTTCTTC
T ss_pred CCCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChh-hccCCccCcEEeCCCCcccccCHHHhhchhhc
Confidence 3567553 467753 14688999999999876554 48999999999999999998888889999999
Q ss_pred CEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccc-cCCcCCCCCCCCCeEEccc
Q 010736 122 SILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNG-SVPHSLGNLTQISMLFLHD 200 (502)
Q Consensus 122 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~ 200 (502)
++|+|++|.+++..|..|+++++|++|++++|++++..+..++++++|++|++++|.+++ .+|..++++++|++|++++
T Consensus 83 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~ 162 (606)
T 3vq2_A 83 SNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSY 162 (606)
T ss_dssp CEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCS
T ss_pred CEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccC
Confidence 999999999988888888888899999998888887776778888888888888888875 5677777777777777777
Q ss_pred cccccc
Q 010736 201 NSFSGF 206 (502)
Q Consensus 201 N~l~~~ 206 (502)
|++++.
T Consensus 163 n~l~~~ 168 (606)
T 3vq2_A 163 NYIQTI 168 (606)
T ss_dssp SCCCEE
T ss_pred Ccceec
Confidence 766544
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.6e-37 Score=329.82 Aligned_cols=334 Identities=21% Similarity=0.218 Sum_probs=293.8
Q ss_pred CEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEc
Q 010736 71 RVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYI 150 (502)
Q Consensus 71 ~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 150 (502)
.++.++++++.+++..+ ..|+.+++|++|++++|+++ .+|..+.++++|++|++++|.+++..|..++.+++|++|++
T Consensus 255 ~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 332 (606)
T 3t6q_A 255 SVESINLQKHYFFNISS-NTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSI 332 (606)
T ss_dssp EEEEEECTTCCCSSCCT-TTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEEC
T ss_pred ceeEEEeecCccCccCH-HHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEEC
Confidence 68999999999986544 45999999999999999999 78889999999999999999999888989999999999999
Q ss_pred cCCcCcccCCcc-cCCCCCCcEEEcccCcccccC--CcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccc
Q 010736 151 DSNQLDGSIPLE-VGQLSSMVELALFSNNLNGSV--PHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQF 227 (502)
Q Consensus 151 s~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l 227 (502)
++|.+.+.+|.. +..+++|++|++++|++++.. |..+..+++|++|++++|++.+..|..+..+++|+.|++++|++
T Consensus 333 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 412 (606)
T 3t6q_A 333 KGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRL 412 (606)
T ss_dssp CSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCE
T ss_pred CCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcC
Confidence 999999777765 899999999999999999776 78899999999999999999999999999999999999999999
Q ss_pred cCccccc-ccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCccc---CCccccCCCCCcEEEccCCcccccc
Q 010736 228 SGPIPLS-LGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSY---LPQNICRGGALQIFTVSENRFQGTI 302 (502)
Q Consensus 228 ~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~---~~~~~~~~~~L~~L~ls~n~l~~~~ 302 (502)
++..|.. +..+++|+.|++++|.+.+..|..+.. ..|++|++++|++++. .+..+..+++|+.|++++|++++..
T Consensus 413 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 492 (606)
T 3t6q_A 413 KVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSID 492 (606)
T ss_dssp ECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEEC
T ss_pred CCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccC
Confidence 9876654 899999999999999999888887776 7899999999999873 3356888999999999999999998
Q ss_pred CcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCccccccCcccccCC
Q 010736 303 PKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKP 382 (502)
Q Consensus 303 ~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~dfGl~~ll~~ 382 (502)
|..+..+++|+.|++++|++++..+..+..++.| +|++++|++++..|..+..+++|+++++++|++.|||...++..+
T Consensus 493 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~w 571 (606)
T 3t6q_A 493 QHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIYFLEW 571 (606)
T ss_dssp TTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGHHHHHH
T ss_pred hhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcHHHHHH
Confidence 9999999999999999999999999999999999 999999999999898899999999999999999999998776543
Q ss_pred CCCCcccc--cccccccCcccccccee
Q 010736 383 DSSNWTGF--AGTYGYIAPELAYTMKI 407 (502)
Q Consensus 383 ~~~~~~~~--~gt~gy~aPE~~~~~~~ 407 (502)
.......+ .....|..|+...+.++
T Consensus 572 ~~~~~~~~~~~~~~~C~~p~~~~g~~l 598 (606)
T 3t6q_A 572 YKENMQKLEDTEDTLCENPPLLRGVRL 598 (606)
T ss_dssp HHHCGGGEECGGGCBEEESGGGTTCBG
T ss_pred HHhCcccccCCCCCeeCCchHhCCCee
Confidence 21111111 12234455666655544
No 10
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.1e-36 Score=326.31 Aligned_cols=350 Identities=21% Similarity=0.260 Sum_probs=263.5
Q ss_pred CCCccc----eeeeCCC----------CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCC
Q 010736 57 SPCAWS----GISCNDA----------GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLS 122 (502)
Q Consensus 57 ~~C~W~----Gv~C~~~----------~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~ 122 (502)
+||.+. .|.|... ..++.|||++|++++ +++.+|.++++|++|+|++|+|++..|.+|.++++|+
T Consensus 25 ~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~-l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~ 103 (635)
T 4g8a_A 25 EPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLS 103 (635)
T ss_dssp CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCC-CCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCC
Confidence 467543 4678642 368999999999985 5555699999999999999999998888999999999
Q ss_pred EEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccc-cCCcCCCCCCCCCeEEcccc
Q 010736 123 ILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNG-SVPHSLGNLTQISMLFLHDN 201 (502)
Q Consensus 123 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N 201 (502)
+|+|++|+|++..+..|.++++|++|+|++|++++..+..|+++++|++|++++|++++ .+|..++.+++|++|++++|
T Consensus 104 ~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N 183 (635)
T 4g8a_A 104 TLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 183 (635)
T ss_dssp EEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSS
T ss_pred EEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCc
Confidence 99999999998777889999999999999999998877889999999999999999976 46788899999999999999
Q ss_pred cccccCCccCcCCcc-----------------------------------------------------------------
Q 010736 202 SFSGFIPPDIGNLKS----------------------------------------------------------------- 216 (502)
Q Consensus 202 ~l~~~~p~~~~~l~~----------------------------------------------------------------- 216 (502)
++++..+..+..+.+
T Consensus 184 ~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~ 263 (635)
T 4g8a_A 184 KIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN 263 (635)
T ss_dssp CCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTT
T ss_pred cccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCccccccccccccccc
Confidence 887654443322111
Q ss_pred ------------------------------------------------------------------CCccccccccccCc
Q 010736 217 ------------------------------------------------------------------ISILSLAINQFSGP 230 (502)
Q Consensus 217 ------------------------------------------------------------------L~~L~ls~N~l~~~ 230 (502)
++.|++.+|.+.+.
T Consensus 264 ~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~ 343 (635)
T 4g8a_A 264 EGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQF 343 (635)
T ss_dssp SCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSC
T ss_pred ccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCc
Confidence 11112222211110
Q ss_pred cc-------------------ccccCCCCCcEEEeeCcccc---------------------------------------
Q 010736 231 IP-------------------LSLGNLTNLKQFSLVYNNLY--------------------------------------- 252 (502)
Q Consensus 231 ~p-------------------~~~~~l~~L~~L~l~~N~l~--------------------------------------- 252 (502)
.+ .....+++|+.|+++.|.+.
T Consensus 344 ~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~ 423 (635)
T 4g8a_A 344 PTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLE 423 (635)
T ss_dssp CCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCC
T ss_pred CcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhcccccccccccccccccccc
Confidence 00 01112344555555554432
Q ss_pred -----------------------------------ccCCCCCcc-ccccEEECcCCcC-cccCCccccCCCCCcEEEccC
Q 010736 253 -----------------------------------GSIPPSLDN-LVLTKLSLDDNHF-TSYLPQNICRGGALQIFTVSE 295 (502)
Q Consensus 253 -----------------------------------~~~p~~~~~-~~L~~L~ls~N~l-~~~~~~~~~~~~~L~~L~ls~ 295 (502)
+..+..+.. ..++.|++++|.+ .+..|..+..+++|+.|++++
T Consensus 424 ~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~ 503 (635)
T 4g8a_A 424 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 503 (635)
T ss_dssp EEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred chhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCC
Confidence 111111111 3466777777764 344677788899999999999
Q ss_pred CccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCC-CCCCeeeecCCcccccc
Q 010736 296 NRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGEC-PKLGALNISRNNITGDF 374 (502)
Q Consensus 296 n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~~L~~L~l~~N~l~~df 374 (502)
|++++..|..|.++++|++|+|++|++++..+..|..+++|++|||++|+|++..|..+..+ ++|++|++++|++.|||
T Consensus 504 N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 504 CQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred CccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 99999999999999999999999999999988899999999999999999999999999888 68999999999999999
Q ss_pred CcccccCCCCCCcc--cccccccccCcccccccee
Q 010736 375 GIAKFLKPDSSNWT--GFAGTYGYIAPELAYTMKI 407 (502)
Q Consensus 375 Gl~~ll~~~~~~~~--~~~gt~gy~aPE~~~~~~~ 407 (502)
.+.++..+...... .....+.|..|+...+..+
T Consensus 584 ~~~~~~~wl~~~~~~~~~~~~~~C~~P~~~~g~~l 618 (635)
T 4g8a_A 584 EHQSFLQWIKDQRQLLVEVERMECATPSDKQGMPV 618 (635)
T ss_dssp GGHHHHHHHHHTTTTBSCGGGCBBCSSTTTTTCBG
T ss_pred CcHHHHHHHHhCCCccCCCCCceeCCchHHCCCEe
Confidence 99887653211111 1112334556766665544
No 11
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=8.7e-37 Score=314.32 Aligned_cols=306 Identities=23% Similarity=0.266 Sum_probs=242.6
Q ss_pred CCCccceeeeCCCCCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCC-
Q 010736 57 SPCAWSGISCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNI- 135 (502)
Q Consensus 57 ~~C~W~Gv~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~- 135 (502)
+||. .+-.|. + ..++.++++++ .+|. + .++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+
T Consensus 2 ~p~~-~~c~~~--~--~~~~c~~~~l~-~lp~--l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~ 71 (455)
T 3v47_A 2 DPGT-SECSVI--G--YNAICINRGLH-QVPE--L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIR 71 (455)
T ss_dssp ------CCEEE--T--TEEECCSSCCS-SCCC--C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEEC
T ss_pred CCcc-ceeEEE--c--cccCcCCCCcc-cCCC--C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceEC
Confidence 5776 233343 2 24778888876 4443 2 278999999999999999999999999999999999998666
Q ss_pred CcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcC--CCCCCCCCeEEcccccccccCCcc-Cc
Q 010736 136 PHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHS--LGNLTQISMLFLHDNSFSGFIPPD-IG 212 (502)
Q Consensus 136 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~ 212 (502)
|..|.++++|++|+|++|++++..|..|+++++|++|++++|++++.+|.. +..+++|++|++++|.+++..|.. +.
T Consensus 72 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 151 (455)
T 3v47_A 72 NNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFL 151 (455)
T ss_dssp TTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGG
T ss_pred cccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccC
Confidence 567999999999999999999999999999999999999999999866554 899999999999999999887876 88
Q ss_pred CCccCCccccccccccCcccccccCC----------------------------------CCCcEEEeeCccccccCCCC
Q 010736 213 NLKSISILSLAINQFSGPIPLSLGNL----------------------------------TNLKQFSLVYNNLYGSIPPS 258 (502)
Q Consensus 213 ~l~~L~~L~ls~N~l~~~~p~~~~~l----------------------------------~~L~~L~l~~N~l~~~~p~~ 258 (502)
.+++|++|++++|++++..|..+..+ ++|+.|++++|++++..|..
T Consensus 152 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~ 231 (455)
T 3v47_A 152 NMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKR 231 (455)
T ss_dssp GCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHH
T ss_pred CCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhh
Confidence 99999999999999998888766554 46777777777665433221
Q ss_pred Cc----------------------------------------cccccEEECcCCcCcccCCccccCCCCCcEEEccCCcc
Q 010736 259 LD----------------------------------------NLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRF 298 (502)
Q Consensus 259 ~~----------------------------------------~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l 298 (502)
+. ...++.|++++|++++..|..+..+++|+.|++++|++
T Consensus 232 ~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 311 (455)
T 3v47_A 232 FFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEI 311 (455)
T ss_dssp HHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred hhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcc
Confidence 10 03577777777777777777777778888888888888
Q ss_pred ccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCcccc
Q 010736 299 QGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITG 372 (502)
Q Consensus 299 ~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~ 372 (502)
++..+..+..+++|+.|++++|.+++..+..+..+++|++|+|++|++++..|..+..+++|++|++++|++.+
T Consensus 312 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 312 NKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred cccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCcccc
Confidence 77777777778888888888888877777777778888888888888877777777788888888888887754
No 12
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=317.73 Aligned_cols=164 Identities=17% Similarity=0.197 Sum_probs=98.7
Q ss_pred CCccCCccccccccccCcccccccCCCCCcEEEeeCccccc--cCCCCCcc-ccccEEECcCCcCcccCCc-cccCCCCC
Q 010736 213 NLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYG--SIPPSLDN-LVLTKLSLDDNHFTSYLPQ-NICRGGAL 288 (502)
Q Consensus 213 ~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~-~~L~~L~ls~N~l~~~~~~-~~~~~~~L 288 (502)
.+++|++|++++|++++.+|..++.+++|+.|++++|++++ .+|..+.. ..|++|++++|++++.+|. .+..+++|
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccC
Confidence 34445555555555555455555555555555555555543 22222222 4455555555555553332 24455555
Q ss_pred cEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCC
Q 010736 289 QIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRN 368 (502)
Q Consensus 289 ~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N 368 (502)
+.|++++|++++..|..+. ++|+.|++++|+++ .+|..+..+++|++|++++|+++...+..+..+++|++|++++|
T Consensus 402 ~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N 478 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTN 478 (520)
T ss_dssp CEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCC
Confidence 6666666655555444332 56777777777776 55665667888888888888887433334778888888888888
Q ss_pred ccccccCcccc
Q 010736 369 NITGDFGIAKF 379 (502)
Q Consensus 369 ~l~~dfGl~~l 379 (502)
++.|||.+.++
T Consensus 479 ~~~c~c~~~~~ 489 (520)
T 2z7x_B 479 PWDCSCPRIDY 489 (520)
T ss_dssp CBCCCHHHHHH
T ss_pred CCcccCCchHH
Confidence 88888887766
No 13
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=327.37 Aligned_cols=313 Identities=20% Similarity=0.218 Sum_probs=279.7
Q ss_pred CCccceeeeCCCCCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccC-CccCcCCCCCCEEEccCCcCcCCCC
Q 010736 58 PCAWSGISCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTI-PPQISNLTNLSILSLGGNQFSGNIP 136 (502)
Q Consensus 58 ~C~W~Gv~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~-p~~l~~l~~L~~L~Ls~N~l~~~~p 136 (502)
.|.|..|.+ -..+++.|+|++|.+++..+. .|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|
T Consensus 13 ~~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~-~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 13 FCNLTQVPQ-VLNTTERLLLSFNYIRTVTAS-SFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCCSSCCCS-SCTTCCEEEEESCCCCEECSS-SCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCCC-CCCCcCEEECCCCcCCccChh-HCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 457888887 557899999999999976665 4999999999999999776666 7889999999999999999999999
Q ss_pred cccCCCCCCcEEEccCCcCcccCCcc--cCCCCCCcEEEcccCcccccCC-cCCCCCCCCCeEEcccccccccCCccCcC
Q 010736 137 HEVGLMSHLKILYIDSNQLDGSIPLE--VGQLSSMVELALFSNNLNGSVP-HSLGNLTQISMLFLHDNSFSGFIPPDIGN 213 (502)
Q Consensus 137 ~~l~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 213 (502)
..|+++++|++|+|++|++++.+|.. |.++++|++|++++|.+++..+ ..|+++++|++|++++|.+++..+..+..
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence 99999999999999999999877765 9999999999999999987765 57899999999999999999998988888
Q ss_pred C--ccCCccccccccccCcccccccCCCC------CcEEEeeCccccccCCCCCc-------------------------
Q 010736 214 L--KSISILSLAINQFSGPIPLSLGNLTN------LKQFSLVYNNLYGSIPPSLD------------------------- 260 (502)
Q Consensus 214 l--~~L~~L~ls~N~l~~~~p~~~~~l~~------L~~L~l~~N~l~~~~p~~~~------------------------- 260 (502)
+ ++|+.|+++.|.+.+..|..++.+.+ |+.|++++|.+++..+..+.
T Consensus 171 l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 7 89999999999999988888777765 99999999988766554322
Q ss_pred --------------cccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCcccccc
Q 010736 261 --------------NLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNI 326 (502)
Q Consensus 261 --------------~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 326 (502)
...++.|++++|.+.+..+..+..+++|+.|++++|++++..+..|..+++|++|++++|.+++..
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 330 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELY 330 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCC
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccC
Confidence 136889999999999988899999999999999999999888889999999999999999999888
Q ss_pred CcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCcccc
Q 010736 327 SKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITG 372 (502)
Q Consensus 327 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~ 372 (502)
+..|..+++|++|++++|++.+..+..+..+++|++|++++|.+.+
T Consensus 331 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 331 SSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp SCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred HHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 8999999999999999999988888889999999999999998764
No 14
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.2e-36 Score=322.33 Aligned_cols=292 Identities=20% Similarity=0.354 Sum_probs=258.8
Q ss_pred CCEEEEEecCCCCcee-----------------cCcccCC--CCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCc
Q 010736 70 GRVINISLRGVGLKGK-----------------LHAFSFS--SFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQ 130 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~-----------------l~~~~~~--~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~ 130 (502)
.+++.|+|++|.++|. +|.. ++ ++++|++|+|++|++.|.+|..|+++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~-l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTED-LKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSC-CCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchh-hhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 5789999999999996 8876 88 99999999999999999999999999999999999998
Q ss_pred -CcC-CCCcccCCC------CCCcEEEccCCcCcccCCc--ccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEccc
Q 010736 131 -FSG-NIPHEVGLM------SHLKILYIDSNQLDGSIPL--EVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHD 200 (502)
Q Consensus 131 -l~~-~~p~~l~~l------~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 200 (502)
++| .+|..++.+ ++|++|++++|+++ .+|. .++.+++|++|++++|+++|.+| .++.+++|++|++++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAY 362 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCC
Confidence 998 899988876 99999999999999 8888 89999999999999999999999 899999999999999
Q ss_pred ccccccCCccCcCCcc-CCccccccccccCcccccccCCC--CCcEEEeeCccccccCCCCCc-------c-ccccEEEC
Q 010736 201 NSFSGFIPPDIGNLKS-ISILSLAINQFSGPIPLSLGNLT--NLKQFSLVYNNLYGSIPPSLD-------N-LVLTKLSL 269 (502)
Q Consensus 201 N~l~~~~p~~~~~l~~-L~~L~ls~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~p~~~~-------~-~~L~~L~l 269 (502)
|+++ .+|..+..+++ |++|++++|+++ .+|..+..++ +|+.|++++|.+++.+|..+. . ..|+.|++
T Consensus 363 N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~L 440 (636)
T 4eco_A 363 NQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINL 440 (636)
T ss_dssp SEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEEC
T ss_pred Cccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEEC
Confidence 9999 78888999999 999999999999 7888887765 899999999999998888776 3 57999999
Q ss_pred cCCcCcccCCccccCCCCCcEEEccCCccccccCcc-cccC-------CCCcEEeCCCCccccccCcccC--CCCCCcEE
Q 010736 270 DDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKS-LRNC-------TSLIRVRLDGNNLTGNISKAFG--IYPNLTFI 339 (502)
Q Consensus 270 s~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~-l~~l-------~~L~~L~l~~N~l~~~~~~~~~--~l~~L~~L 339 (502)
++|++++..+..+..+++|+.|++++|+++ .+|.. +... ++|+.|++++|+++ .+|..+. .+++|+.|
T Consensus 441 s~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L 518 (636)
T 4eco_A 441 SNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGI 518 (636)
T ss_dssp CSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEE
T ss_pred cCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEE
Confidence 999999654445566899999999999998 55543 3322 28999999999998 6677776 88999999
Q ss_pred EccCcccccccCccccCCCCCCeeeecCCc
Q 010736 340 DLSRNNFYGEISSNFGECPKLGALNISRNN 369 (502)
Q Consensus 340 ~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~ 369 (502)
+|++|++++ +|..+..+++|++|++++|+
T Consensus 519 ~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~ 547 (636)
T 4eco_A 519 DLSYNSFSK-FPTQPLNSSTLKGFGIRNQR 547 (636)
T ss_dssp ECCSSCCSS-CCCGGGGCSSCCEEECCSCB
T ss_pred ECCCCCCCC-cChhhhcCCCCCEEECCCCc
Confidence 999999987 88888899999999996654
No 15
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.7e-36 Score=315.09 Aligned_cols=154 Identities=18% Similarity=0.227 Sum_probs=130.2
Q ss_pred CCccceeeeCCC------------CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEE
Q 010736 58 PCAWSGISCNDA------------GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILS 125 (502)
Q Consensus 58 ~C~W~Gv~C~~~------------~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ 125 (502)
+|.|.|+ |+.. .+++.|+|+++++++..+. .|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHG-DLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSS-TTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChh-hhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 5899998 8532 3699999999999977665 499999999999999999999999999999999999
Q ss_pred ccCCcCcCCCCcccCCCCCCcEEEccCCcCcc-cCCcccCCCCCCcEEEcccCcccccCC-cCCCCCCCCCeEEcccccc
Q 010736 126 LGGNQFSGNIPHEVGLMSHLKILYIDSNQLDG-SIPLEVGQLSSMVELALFSNNLNGSVP-HSLGNLTQISMLFLHDNSF 203 (502)
Q Consensus 126 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l 203 (502)
|++|++++..|..|+++++|++|++++|++++ ..|..++++++|++|++++|++.+.+| ..+.++++|++|++++|++
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 99999998877779999999999999999986 356788899999999999998544554 5788888888888888888
Q ss_pred cccCCccCcC
Q 010736 204 SGFIPPDIGN 213 (502)
Q Consensus 204 ~~~~p~~~~~ 213 (502)
++..|..++.
T Consensus 161 ~~~~~~~l~~ 170 (549)
T 2z81_A 161 RNYQSQSLKS 170 (549)
T ss_dssp CEECTTTTTT
T ss_pred cccChhhhhc
Confidence 8766665543
No 16
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5e-35 Score=312.13 Aligned_cols=301 Identities=18% Similarity=0.199 Sum_probs=230.0
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEE
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILY 149 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 149 (502)
..++.|+|++|.+++..+. .|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNT-TFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp TTCCEEECTTCCCSEECTT-TSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred CcCcEEEccCCccCcCChh-HhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 3689999999999976555 599999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCC--ccccccccc
Q 010736 150 IDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSIS--ILSLAINQF 227 (502)
Q Consensus 150 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~--~L~ls~N~l 227 (502)
+++|++++..|..++.+++|++|++++|++++..+..+..+++|++|++++|.+++..|..++.+++|+ .|++++|.+
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l 191 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI 191 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc
Confidence 999999987788899999999999999999975444555689999999999988877777677776666 566666655
Q ss_pred cCcc---------------------------------------------------------------------------c
Q 010736 228 SGPI---------------------------------------------------------------------------P 232 (502)
Q Consensus 228 ~~~~---------------------------------------------------------------------------p 232 (502)
++.. +
T Consensus 192 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 192 AGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp CEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred CccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 5433 3
Q ss_pred ccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCc-ccccCC
Q 010736 233 LSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPK-SLRNCT 310 (502)
Q Consensus 233 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~-~l~~l~ 310 (502)
..|..+++|+.|++++|.++ .+|..+.. ..|++|++++|++++..|..+..+++|+.|++++|.+.+.++. .+..++
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 33555666777777777666 55555544 5677777777777666666666666666777666666655443 366666
Q ss_pred CCcEEeCCCCcccccc--CcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCcccc
Q 010736 311 SLIRVRLDGNNLTGNI--SKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITG 372 (502)
Q Consensus 311 ~L~~L~l~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~ 372 (502)
+|++|++++|.+++.. +..+..+++|++|++++|++.+..+..+..+++|++|++++|.+.+
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 414 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKV 414 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEEC
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCC
Confidence 6777777777666554 5566666777777777777766666666667777777777776643
No 17
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.3e-35 Score=313.81 Aligned_cols=301 Identities=19% Similarity=0.206 Sum_probs=202.3
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEE
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILY 149 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 149 (502)
.+++.|+|++|.+++..+. .|.++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMP-DISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCCCCCGG-GTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCcCEEECCCCCccccChh-hhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 5788999999999865444 5999999999999999999888999999999999999999998 56665 789999999
Q ss_pred ccCCcCcc-cCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCC--CeEEcccccc-----------------------
Q 010736 150 IDSNQLDG-SIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQI--SMLFLHDNSF----------------------- 203 (502)
Q Consensus 150 Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l----------------------- 203 (502)
+++|++++ .+|..|+++++|++|++++|++++. .+..+++| ++|++++|.+
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~ 204 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFH 204 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEEC
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEec
Confidence 99999987 3467889999999999998887642 23333333 5555554444
Q ss_pred --------------------------------------------------------------------------------
Q 010736 204 -------------------------------------------------------------------------------- 203 (502)
Q Consensus 204 -------------------------------------------------------------------------------- 203 (502)
T Consensus 205 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~ 284 (562)
T 3a79_B 205 PNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIY 284 (562)
T ss_dssp SSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEE
T ss_pred CccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEe
Confidence
Q ss_pred ----cccCCccC-----------------------------------------------------cCCccCCcccccccc
Q 010736 204 ----SGFIPPDI-----------------------------------------------------GNLKSISILSLAINQ 226 (502)
Q Consensus 204 ----~~~~p~~~-----------------------------------------------------~~l~~L~~L~ls~N~ 226 (502)
+|.+|..+ ..+++|++|++++|+
T Consensus 285 ~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~ 364 (562)
T 3a79_B 285 NLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNV 364 (562)
T ss_dssp EEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSC
T ss_pred ccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCc
Confidence 33333332 334455555555555
Q ss_pred ccCcccccccCCCCCcEEEeeCcccccc--CCCCCcc-ccccEEECcCCcCcccCCc-cccCCCCCcEEEccCCcccccc
Q 010736 227 FSGPIPLSLGNLTNLKQFSLVYNNLYGS--IPPSLDN-LVLTKLSLDDNHFTSYLPQ-NICRGGALQIFTVSENRFQGTI 302 (502)
Q Consensus 227 l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~~~~-~~L~~L~ls~N~l~~~~~~-~~~~~~~L~~L~ls~n~l~~~~ 302 (502)
+++.+|..+.++++|+.|++++|++++. +|..+.. ..|+.|++++|++++.+|. .+..+++|+.|++++|++++..
T Consensus 365 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 444 (562)
T 3a79_B 365 FTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV 444 (562)
T ss_dssp CCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGG
T ss_pred cccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcch
Confidence 5555555555555555555555555531 1222222 4555555555555553332 3445555666666666665544
Q ss_pred CcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCccccccCccccc
Q 010736 303 PKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFL 380 (502)
Q Consensus 303 ~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~dfGl~~ll 380 (502)
|..+. ++|+.|++++|+++ .+|..+..+++|++|+|++|++++..+..+..+++|++|++++|++.|||.+.+++
T Consensus 445 ~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~ 519 (562)
T 3a79_B 445 FRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYL 519 (562)
T ss_dssp GSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHHHHHH
T ss_pred hhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcchHHHH
Confidence 44332 56777777777776 45555557788888888888887433334777888888888888888888776654
No 18
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=5.7e-35 Score=315.93 Aligned_cols=311 Identities=19% Similarity=0.191 Sum_probs=204.1
Q ss_pred CEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCC-------------------------------
Q 010736 71 RVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLT------------------------------- 119 (502)
Q Consensus 71 ~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~------------------------------- 119 (502)
.++.|+++++.+++..+.. |+.+++|++|++++|++++..|..|.+++
T Consensus 249 ~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~ 327 (680)
T 1ziw_A 249 NLTMLDLSYNNLNVVGNDS-FAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQW 327 (680)
T ss_dssp CCCEEECTTSCCCEECTTT-TTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTT
T ss_pred CCCEEECCCCCcCccCccc-ccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhccc
Confidence 3677777777776655443 77777777777777777766655444444
Q ss_pred --CCCEEEccCCcCcCCCCcccCCCCCCcEEEccCC----------------------------cCcccCCcccCCCCCC
Q 010736 120 --NLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSN----------------------------QLDGSIPLEVGQLSSM 169 (502)
Q Consensus 120 --~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N----------------------------~l~~~~p~~~~~l~~L 169 (502)
+|++|++++|.+++..|..|.++++|++|++++| ++++..|..|..+++|
T Consensus 328 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L 407 (680)
T 1ziw_A 328 LKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHL 407 (680)
T ss_dssp CTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred CCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCC
Confidence 4444444445555444444444444444444333 2333333444444444
Q ss_pred cEEEcccCcccccCC-cCCCCCCCCCeEEcccccccccCCccCcCCccCCcccccccccc--CcccccccCCCCCcEEEe
Q 010736 170 VELALFSNNLNGSVP-HSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFS--GPIPLSLGNLTNLKQFSL 246 (502)
Q Consensus 170 ~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~--~~~p~~~~~l~~L~~L~l 246 (502)
+.|++++|.+++.+| ..+..+++|++|++++|++++..+..|..+++|+.|++++|.++ +.+|..+..+++|+.|++
T Consensus 408 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~L 487 (680)
T 1ziw_A 408 EVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDL 487 (680)
T ss_dssp CEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEEC
T ss_pred CEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEEC
Confidence 444444444444333 33444444555555555544444445555555555555555554 456677778888888888
Q ss_pred eCccccccCCCCCcc-ccccEEECcCCcCcccCC--------ccccCCCCCcEEEccCCccccccCcccccCCCCcEEeC
Q 010736 247 VYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLP--------QNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRL 317 (502)
Q Consensus 247 ~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~--------~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l 317 (502)
++|++++..+..+.. ..|++|++++|++++..+ ..+..+++|+.|++++|+++...+..|.++++|+.|++
T Consensus 488 s~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 567 (680)
T 1ziw_A 488 SNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDL 567 (680)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeEC
Confidence 888888666655555 678888888888876422 23677788888888888888544456888889999999
Q ss_pred CCCccccccCcccCCCCCCcEEEccCcccccccCcccc-CCCCCCeeeecCCccccccCc-ccccCC
Q 010736 318 DGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFG-ECPKLGALNISRNNITGDFGI-AKFLKP 382 (502)
Q Consensus 318 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~~~~L~~L~l~~N~l~~dfGl-~~ll~~ 382 (502)
++|++++..+..|..+++|+.|+|++|++++..+..+. .+++|+++++++|++.|||.+ .++..+
T Consensus 568 s~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~~ 634 (680)
T 1ziw_A 568 GLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNW 634 (680)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCCCSSEECC
T ss_pred CCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCccHHHHHHH
Confidence 99999877777788889999999999999887777776 788999999999999999985 666654
No 19
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-35 Score=304.93 Aligned_cols=302 Identities=18% Similarity=0.133 Sum_probs=274.6
Q ss_pred eeCCCCCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCC
Q 010736 65 SCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSH 144 (502)
Q Consensus 65 ~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 144 (502)
.|.... ..++.++++++ .+|.. + .+++++|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++
T Consensus 8 ~C~~~~--~~v~c~~~~l~-~ip~~-~--~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 81 (477)
T 2id5_A 8 ECSAQD--RAVLCHRKRFV-AVPEG-I--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN 81 (477)
T ss_dssp EEETTT--TEEECCSCCCS-SCCSC-C--CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred eECCCC--CEEEeCCCCcC-cCCCC-C--CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCcc
Confidence 475433 35788888887 45543 3 368999999999999999999999999999999999999988999999999
Q ss_pred CcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCcccccc
Q 010736 145 LKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAI 224 (502)
Q Consensus 145 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 224 (502)
|++|+|++|++++..+..|.++++|++|++++|++++..|..|..+++|++|++++|.+++..+..|..+++|+.|++++
T Consensus 82 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 161 (477)
T 2id5_A 82 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 161 (477)
T ss_dssp CCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEES
T ss_pred CCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCC
Confidence 99999999999977777789999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccC
Q 010736 225 NQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIP 303 (502)
Q Consensus 225 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~ 303 (502)
|++++..+..+.++++|+.|++++|.+.+..+..+.. ..|+.|++++|.+.+.++.......+|+.|++++|++++..+
T Consensus 162 n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 241 (477)
T 2id5_A 162 CNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPY 241 (477)
T ss_dssp CCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCH
T ss_pred CcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCH
Confidence 9999877788999999999999999999877777766 789999999999888888877777899999999999996555
Q ss_pred cccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCcccc
Q 010736 304 KSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITG 372 (502)
Q Consensus 304 ~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~ 372 (502)
..+..+++|+.|++++|.+++..+..|..+++|+.|+|++|++.+..+..+..+++|++|++++|.+.+
T Consensus 242 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 310 (477)
T 2id5_A 242 LAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTT 310 (477)
T ss_dssp HHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSC
T ss_pred HHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCce
Confidence 678999999999999999998888899999999999999999999999999999999999999999864
No 20
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-35 Score=311.54 Aligned_cols=145 Identities=16% Similarity=0.184 Sum_probs=98.4
Q ss_pred cCCCCCcEEEeeCccccccCC-CCCcc-ccccEEECcCCcCcccCCccccCCCCCcEEEccCCccc-cccCcccccCCCC
Q 010736 236 GNLTNLKQFSLVYNNLYGSIP-PSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQ-GTIPKSLRNCTSL 312 (502)
Q Consensus 236 ~~l~~L~~L~l~~N~l~~~~p-~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~-~~~~~~l~~l~~L 312 (502)
..+++|+.|++++|.+.+..| ..+.. ..|++|++++|.+++..|..+..+++|+.|++++|.++ +.+|..+..+++|
T Consensus 393 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L 472 (570)
T 2z63_A 393 LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL 472 (570)
T ss_dssp ETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC
T ss_pred cccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCC
Confidence 334444444444444444333 12222 56777777777777766767777777777777777776 4667777777777
Q ss_pred cEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCccccccCccccc
Q 010736 313 IRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFL 380 (502)
Q Consensus 313 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~dfGl~~ll 380 (502)
+.|++++|++++..|..+..+++|++|++++|++++..+..+..+++|++|++++|++.|++...+++
T Consensus 473 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 540 (570)
T 2z63_A 473 TFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 540 (570)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHH
T ss_pred CEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHH
Confidence 77777777777776777777777777777777777776677777777777788777777777654443
No 21
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=2.1e-36 Score=297.64 Aligned_cols=273 Identities=18% Similarity=0.269 Sum_probs=172.5
Q ss_pred CCCHHHHHHHHHHHhhcCcCCCCCCCCCCCCCCCCCCCCCCCccceeeeCC---------CCCEEEEEecCCCCceecCc
Q 010736 18 SETNEEADALLKWKASLQIHNRSLLSSWIKDTSNVSSKISPCAWSGISCND---------AGRVINISLRGVGLKGKLHA 88 (502)
Q Consensus 18 ~~~~~d~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~~C~W~Gv~C~~---------~~~v~~L~L~~~~l~g~l~~ 88 (502)
++..+|++||++||+++..++.+++.+|.... ....++|.|.|+.|+. ..+|+.|+|++++++ .+|+
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~---~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~ 98 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQAN---SNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD 98 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHT---TTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccc---cccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh
Confidence 35568999999999999767777788884210 0135789999999952 246777777777766 5555
Q ss_pred ccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCC---
Q 010736 89 FSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQ--- 165 (502)
Q Consensus 89 ~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~--- 165 (502)
. +..+++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|++++|++.+.+|..+..
T Consensus 99 ~-l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~ 175 (328)
T 4fcg_A 99 Q-AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDA 175 (328)
T ss_dssp C-GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-
T ss_pred h-hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccc
Confidence 4 666777777777777766 66666677777777777777766 56666666777777777776666666665543
Q ss_pred ------CCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCC
Q 010736 166 ------LSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLT 239 (502)
Q Consensus 166 ------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 239 (502)
+++|++|++++|+++ .+|..++.+++|++|++++|++++ +|..++.++
T Consensus 176 ~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-------------------------l~~~l~~l~ 229 (328)
T 4fcg_A 176 SGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-------------------------LGPAIHHLP 229 (328)
T ss_dssp CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-------------------------CCGGGGGCT
T ss_pred hhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-------------------------CchhhccCC
Confidence 445555555555544 444444444555555555554443 333344445
Q ss_pred CCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCC
Q 010736 240 NLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLD 318 (502)
Q Consensus 240 ~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~ 318 (502)
+|+.|++++|.+.+.+|..+.. ..|++|++++|++.+.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.+++.
T Consensus 230 ~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~ 309 (328)
T 4fcg_A 230 KLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVP 309 (328)
T ss_dssp TCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECC
T ss_pred CCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCC
Confidence 5555555555444444444433 445555555555555566666667777777777777777777777777777777776
Q ss_pred CCccc
Q 010736 319 GNNLT 323 (502)
Q Consensus 319 ~N~l~ 323 (502)
.+.+.
T Consensus 310 ~~~~~ 314 (328)
T 4fcg_A 310 PHLQA 314 (328)
T ss_dssp GGGSC
T ss_pred HHHHH
Confidence 65544
No 22
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=4.7e-35 Score=311.39 Aligned_cols=291 Identities=18% Similarity=0.174 Sum_probs=213.4
Q ss_pred CEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEc
Q 010736 71 RVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYI 150 (502)
Q Consensus 71 ~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 150 (502)
.+..++++++.+. .+|+..|..+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 52 ~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 52 NQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 4577888888776 466666889999999999999999998889999999999999999999988888999999999999
Q ss_pred cCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCc
Q 010736 151 DSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGP 230 (502)
Q Consensus 151 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 230 (502)
++|.+++..+..|+.+++|++|++++|.+++..|..|+.+++|++|++++|.+++.. ++.+++|+.|++++|.+++.
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l 207 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL 207 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEE
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccc
Confidence 999999766666899999999999999999998989999999999999999998753 44556666666666666531
Q ss_pred c------------------cccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCCcEE
Q 010736 231 I------------------PLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIF 291 (502)
Q Consensus 231 ~------------------p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L 291 (502)
. +.. ..++|+.|++++|.+++. ..+.. ..|+.|++++|.+++..|..+..+++|+.|
T Consensus 208 ~~~~~L~~L~ls~n~l~~~~~~--~~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 283 (597)
T 3oja_B 208 AIPIAVEELDASHNSINVVRGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERL 283 (597)
T ss_dssp ECCTTCSEEECCSSCCCEEECS--CCSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEE
T ss_pred cCCchhheeeccCCcccccccc--cCCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEE
Confidence 1 111 113455555555555532 22222 456666666666666666666666666666
Q ss_pred EccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCccc
Q 010736 292 TVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNIT 371 (502)
Q Consensus 292 ~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~ 371 (502)
++++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|++|+|++|.+.+.. +..+++|++|++++|++.
T Consensus 284 ~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~ 358 (597)
T 3oja_B 284 YISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWD 358 (597)
T ss_dssp ECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEE
T ss_pred ECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCC
Confidence 666666664 3444555666666666666666 34445556666666666666665432 555677777777777777
Q ss_pred ccc
Q 010736 372 GDF 374 (502)
Q Consensus 372 ~df 374 (502)
|++
T Consensus 359 ~~~ 361 (597)
T 3oja_B 359 CNS 361 (597)
T ss_dssp HHH
T ss_pred Chh
Confidence 765
No 23
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=6.3e-35 Score=294.40 Aligned_cols=291 Identities=17% Similarity=0.162 Sum_probs=194.6
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEE
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILY 149 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 149 (502)
..++.++++++.++ .+|+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 45 ~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 45 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp CCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 35778889888876 56666688999999999999999988888999999999999999999988888899999999999
Q ss_pred ccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccC
Q 010736 150 IDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSG 229 (502)
Q Consensus 150 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 229 (502)
+++|+++...+..|..+++|++|++++|++++..|..+..+++|++|++++|++++.. +..+++|+.|++++|.+++
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccccc
Confidence 9999999555555789999999999999999888888999999999999999998652 4556677777777776653
Q ss_pred cccccccCCCCCcEEEeeCccccccCC-------------------CCCcc-ccccEEECcCCcCcccCCccccCCCCCc
Q 010736 230 PIPLSLGNLTNLKQFSLVYNNLYGSIP-------------------PSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQ 289 (502)
Q Consensus 230 ~~p~~~~~l~~L~~L~l~~N~l~~~~p-------------------~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~ 289 (502)
. ...++|+.|++++|.+..... ..+.. ..|++|++++|.+++..|..+..+++|+
T Consensus 201 ~-----~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 275 (390)
T 3o6n_A 201 L-----AIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLE 275 (390)
T ss_dssp E-----ECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCC
T ss_pred c-----CCCCcceEEECCCCeeeeccccccccccEEECCCCCCcccHHHcCCCCccEEECCCCcCCCcChhHccccccCC
Confidence 2 222345555555555442211 11211 3444555555554444444444445555
Q ss_pred EEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCc
Q 010736 290 IFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNN 369 (502)
Q Consensus 290 ~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~ 369 (502)
.|++++|++++ ++..+..+++|+.|++++|++++ +|..+..+++|+.|++++|+++.. .+..+++|++|++++|+
T Consensus 276 ~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~---~~~~~~~L~~L~l~~N~ 350 (390)
T 3o6n_A 276 RLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTL---KLSTHHTLKNLTLSHND 350 (390)
T ss_dssp EEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCC---CCCTTCCCSEEECCSSC
T ss_pred EEECCCCcCcc-cCcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCcccee---CchhhccCCEEEcCCCC
Confidence 55555554442 23333444445555555554442 233334444555555555554422 13444555555555555
Q ss_pred ccccc
Q 010736 370 ITGDF 374 (502)
Q Consensus 370 l~~df 374 (502)
+.|++
T Consensus 351 ~~~~~ 355 (390)
T 3o6n_A 351 WDCNS 355 (390)
T ss_dssp EEHHH
T ss_pred ccchh
Confidence 55554
No 24
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=9.6e-36 Score=291.07 Aligned_cols=254 Identities=25% Similarity=0.406 Sum_probs=209.0
Q ss_pred CCCCEEECCCCcccc--cCCccCcCCCCCCEEEccC-CcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcE
Q 010736 95 PHLAYLDLRDNKLFG--TIPPQISNLTNLSILSLGG-NQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVE 171 (502)
Q Consensus 95 ~~L~~L~Ls~N~l~g--~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 171 (502)
.++++|+|++|.++| .+|..|+++++|++|+|++ |.+.+.+|..|+++++|++|++++|++++.+|..|..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 478889999999988 8888899999999999984 8888888888888888888888888888888888888888888
Q ss_pred EEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCc-cCCccccccccccCcccccccCCCCCcEEEeeCcc
Q 010736 172 LALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLK-SISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNN 250 (502)
Q Consensus 172 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 250 (502)
|++++|++++.+|..+..+++|++|++++|++++.+|..+..++ +|++|++++|++++.+|..+..++ |
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L--------- 199 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-L--------- 199 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-C---------
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-c---------
Confidence 88888888888888788888888888888887777777766665 666666666666655555555443 4
Q ss_pred ccccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCccc
Q 010736 251 LYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAF 330 (502)
Q Consensus 251 l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~ 330 (502)
+.|++++|++++..|..+..+++|+.|++++|++++.++. +..+++|++|++++|++++.+|..+
T Consensus 200 --------------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l 264 (313)
T 1ogq_A 200 --------------AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGL 264 (313)
T ss_dssp --------------SEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGG
T ss_pred --------------cEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHH
Confidence 4555555555555666777888999999999999877665 7889999999999999999999999
Q ss_pred CCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCcccccc
Q 010736 331 GIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGDF 374 (502)
Q Consensus 331 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~df 374 (502)
..+++|++|+|++|++++.+|.. ..+++|+.+++++|+..|+.
T Consensus 265 ~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 265 TQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp GGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEEST
T ss_pred hcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccCC
Confidence 99999999999999999999886 88999999999999977654
No 25
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=8.3e-35 Score=317.56 Aligned_cols=290 Identities=19% Similarity=0.293 Sum_probs=248.1
Q ss_pred CCEEEEEecCCCCce-----------------ecCcccCC--CCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCc
Q 010736 70 GRVINISLRGVGLKG-----------------KLHAFSFS--SFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQ 130 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g-----------------~l~~~~~~--~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~ 130 (502)
.+++.|+|++|.++| .+|.. ++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~-l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEE-LSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSC-CCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChh-hhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 578999999999999 48875 77 99999999999999999999999999999999999998
Q ss_pred -CcC-CCCcccCCCC-------CCcEEEccCCcCcccCCc--ccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcc
Q 010736 131 -FSG-NIPHEVGLMS-------HLKILYIDSNQLDGSIPL--EVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLH 199 (502)
Q Consensus 131 -l~~-~~p~~l~~l~-------~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 199 (502)
++| .+|..++.++ +|++|+|++|+++ .+|. .++++++|+.|++++|+++ .+| .|+.+++|+.|+++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLD 603 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECC
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECc
Confidence 998 8888666555 9999999999999 8888 8999999999999999999 888 89999999999999
Q ss_pred cccccccCCccCcCCcc-CCccccccccccCcccccccCCCC--CcEEEeeCccccccCCCCC------ccccccEEECc
Q 010736 200 DNSFSGFIPPDIGNLKS-ISILSLAINQFSGPIPLSLGNLTN--LKQFSLVYNNLYGSIPPSL------DNLVLTKLSLD 270 (502)
Q Consensus 200 ~N~l~~~~p~~~~~l~~-L~~L~ls~N~l~~~~p~~~~~l~~--L~~L~l~~N~l~~~~p~~~------~~~~L~~L~ls 270 (502)
+|+++ .+|..+..+++ |+.|++++|+++ .+|..+..++. |+.|++++|++.+.+|... ....|+.|+++
T Consensus 604 ~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls 681 (876)
T 4ecn_A 604 YNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLS 681 (876)
T ss_dssp SSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECC
T ss_pred CCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEcc
Confidence 99999 88888999999 999999999999 78888877754 9999999999998766432 12478899999
Q ss_pred CCcCcccCCccc-cCCCCCcEEEccCCccccccCccccc--------CCCCcEEeCCCCccccccCcccC--CCCCCcEE
Q 010736 271 DNHFTSYLPQNI-CRGGALQIFTVSENRFQGTIPKSLRN--------CTSLIRVRLDGNNLTGNISKAFG--IYPNLTFI 339 (502)
Q Consensus 271 ~N~l~~~~~~~~-~~~~~L~~L~ls~n~l~~~~~~~l~~--------l~~L~~L~l~~N~l~~~~~~~~~--~l~~L~~L 339 (502)
+|+++. +|..+ ..+++|+.|++++|+++ .+|..+.. +++|+.|+|++|+++ .+|..+. .+++|+.|
T Consensus 682 ~N~L~~-lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L 758 (876)
T 4ecn_A 682 YNEIQK-FPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNM 758 (876)
T ss_dssp SSCCCS-CCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEE
T ss_pred CCcCCc-cCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEE
Confidence 999985 45444 47888899999998888 55544332 238888888888888 5667776 88888888
Q ss_pred EccCcccccccCccccCCCCCCeeeecCCc
Q 010736 340 DLSRNNFYGEISSNFGECPKLGALNISRNN 369 (502)
Q Consensus 340 ~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~ 369 (502)
+|++|++++ +|..+..+++|+.|++++|+
T Consensus 759 ~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~ 787 (876)
T 4ecn_A 759 DVSYNCFSS-FPTQPLNSSQLKAFGIRHQR 787 (876)
T ss_dssp ECCSSCCSS-CCCGGGGCTTCCEEECCCCB
T ss_pred EeCCCCCCc-cchhhhcCCCCCEEECCCCC
Confidence 888888886 67788888888888887744
No 26
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=5.9e-34 Score=307.99 Aligned_cols=300 Identities=19% Similarity=0.207 Sum_probs=257.1
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEE
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILY 149 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 149 (502)
.+++.|+|+++++++.. +..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLP-AANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCCCC-GGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCCcC-HHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 47999999999999754 44599999999999999999999999999999999999999999966666799999999999
Q ss_pred ccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCc--CCccCCccccccccc
Q 010736 150 IDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIG--NLKSISILSLAINQF 227 (502)
Q Consensus 150 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~ls~N~l 227 (502)
+++|++++..|..|+++++|++|++++|.+++..|..++++++|++|++++|.+++..+..+. .+++|+.|++++|++
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999999988888999999999999999999999999999999999999999999987776654 458999999999999
Q ss_pred cCcccccccCC---------------------------CCCcEEEeeCccccccCCCCCcc---ccccEEECcCCcCccc
Q 010736 228 SGPIPLSLGNL---------------------------TNLKQFSLVYNNLYGSIPPSLDN---LVLTKLSLDDNHFTSY 277 (502)
Q Consensus 228 ~~~~p~~~~~l---------------------------~~L~~L~l~~N~l~~~~p~~~~~---~~L~~L~ls~N~l~~~ 277 (502)
++..|..+..+ ++|+.|++++|.+++..|..+.. ..|+.|++++|++++.
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCcc
Confidence 98888766554 45778888888888888877765 3499999999999998
Q ss_pred CCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccc-----cC----cccCCCCCCcEEEccCccccc
Q 010736 278 LPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGN-----IS----KAFGIYPNLTFIDLSRNNFYG 348 (502)
Q Consensus 278 ~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~-----~~----~~~~~l~~L~~L~Ls~N~l~~ 348 (502)
.|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|...+. +| ..|..+++|++|++++|++.+
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred CcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 888899999999999999999988888888888888888887654431 22 266778888888888888888
Q ss_pred ccCccccCCCCCCeeeecCCcc
Q 010736 349 EISSNFGECPKLGALNISRNNI 370 (502)
Q Consensus 349 ~~~~~~~~~~~L~~L~l~~N~l 370 (502)
..+..+..+++|++|++++|.+
T Consensus 344 ~~~~~~~~l~~L~~L~Ls~n~~ 365 (680)
T 1ziw_A 344 IKSNMFTGLINLKYLSLSNSFT 365 (680)
T ss_dssp CCTTTTTTCTTCCEEECTTCBS
T ss_pred CChhHhccccCCcEEECCCCch
Confidence 7777788888888888777653
No 27
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.2e-33 Score=298.21 Aligned_cols=296 Identities=21% Similarity=0.207 Sum_probs=248.1
Q ss_pred EEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccC
Q 010736 73 INISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDS 152 (502)
Q Consensus 73 ~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 152 (502)
..++.++++++ .+|.. +. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++
T Consensus 14 ~~~~c~~~~l~-~ip~~-~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~ 89 (606)
T 3vq2_A 14 ITYQCMDQKLS-KVPDD-IP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTG 89 (606)
T ss_dssp TEEECTTSCCS-SCCTT-SC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CceEccCCCcc-cCCCC-CC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCC
Confidence 46899999987 56653 43 7899999999999999998999999999999999999988899999999999999999
Q ss_pred CcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccc-cCCccCcCCccCCccccccccccCcc
Q 010736 153 NQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSG-FIPPDIGNLKSISILSLAINQFSGPI 231 (502)
Q Consensus 153 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~~~~ 231 (502)
|++++..|..|+++++|++|++++|++++..+..++++++|++|++++|.+++ .+|..++++++|++|++++|++++..
T Consensus 90 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~ 169 (606)
T 3vq2_A 90 NPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTIT 169 (606)
T ss_dssp CCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEEC
T ss_pred CcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecC
Confidence 99999889999999999999999999998887889999999999999999986 56999999999999999988776543
Q ss_pred ccccc---------------------------------------------------------------------------
Q 010736 232 PLSLG--------------------------------------------------------------------------- 236 (502)
Q Consensus 232 p~~~~--------------------------------------------------------------------------- 236 (502)
|..++
T Consensus 170 ~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~ 249 (606)
T 3vq2_A 170 VNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEI 249 (606)
T ss_dssp TTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSC
T ss_pred hhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccc
Confidence 32111
Q ss_pred --------------------------------------------------------------------------------
Q 010736 237 -------------------------------------------------------------------------------- 236 (502)
Q Consensus 237 -------------------------------------------------------------------------------- 236 (502)
T Consensus 250 ~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~ 329 (606)
T 3vq2_A 250 FEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPF 329 (606)
T ss_dssp CCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSS
T ss_pred cChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCc
Confidence
Q ss_pred ------------------CCCCCcEEEeeCcccccc-------------------------CCCCCcc-ccccEEECcCC
Q 010736 237 ------------------NLTNLKQFSLVYNNLYGS-------------------------IPPSLDN-LVLTKLSLDDN 272 (502)
Q Consensus 237 ------------------~l~~L~~L~l~~N~l~~~-------------------------~p~~~~~-~~L~~L~ls~N 272 (502)
.+++|+.|++++|.+++. +|..+.. ..|+.|++++|
T Consensus 330 L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n 409 (606)
T 3vq2_A 330 LKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHS 409 (606)
T ss_dssp CCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTS
T ss_pred cceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCC
Confidence 122333344444433322 1112222 46788888889
Q ss_pred cCcccCC-ccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCcccc-ccCcccCCCCCCcEEEccCccccccc
Q 010736 273 HFTSYLP-QNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTG-NISKAFGIYPNLTFIDLSRNNFYGEI 350 (502)
Q Consensus 273 ~l~~~~~-~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~ 350 (502)
++++..| ..+..+++|+.|++++|.+++..|..+..+++|++|++++|.+++ .+|..+..+++|+.|++++|++++..
T Consensus 410 ~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 489 (606)
T 3vq2_A 410 TLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQIS 489 (606)
T ss_dssp EEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEEC
T ss_pred ccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccC
Confidence 8888777 678889999999999999998888889999999999999999987 47888899999999999999999888
Q ss_pred CccccCCCCCCeeeecCCcccc
Q 010736 351 SSNFGECPKLGALNISRNNITG 372 (502)
Q Consensus 351 ~~~~~~~~~L~~L~l~~N~l~~ 372 (502)
|..+..+++|++|++++|++.+
T Consensus 490 ~~~~~~l~~L~~L~Ls~N~l~~ 511 (606)
T 3vq2_A 490 WGVFDTLHRLQLLNMSHNNLLF 511 (606)
T ss_dssp TTTTTTCTTCCEEECCSSCCSC
T ss_pred hhhhcccccCCEEECCCCcCCC
Confidence 8889999999999999998865
No 28
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=295.42 Aligned_cols=293 Identities=18% Similarity=0.178 Sum_probs=200.1
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEE
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILY 149 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 149 (502)
.+++.|+|+++.+++..+. .|..+++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|.. .+++|++|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 96 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTS-DILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLD 96 (520)
T ss_dssp TTCSEEECCSSCCCCCCHH-HHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEE
T ss_pred ccccEEECCCCcccccChh-hccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEe
Confidence 5788999999999865544 4899999999999999999888889999999999999999998 56665 789999999
Q ss_pred ccCCcCcc-cCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCC--CeEEcccccc--cccCCccCcC-----------
Q 010736 150 IDSNQLDG-SIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQI--SMLFLHDNSF--SGFIPPDIGN----------- 213 (502)
Q Consensus 150 Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~----------- 213 (502)
+++|++++ .+|..|+.+++|++|++++|++++ ..+..+++| ++|++++|.+ .+..|..+..
T Consensus 97 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~ 173 (520)
T 2z7x_B 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFP 173 (520)
T ss_dssp CCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECC
T ss_pred ccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEec
Confidence 99999987 478889999999999999999886 346777777 9999999988 6666665554
Q ss_pred ---------------CccCCcccccccc-------ccCcccccccCC---------------------------CCCcEE
Q 010736 214 ---------------LKSISILSLAINQ-------FSGPIPLSLGNL---------------------------TNLKQF 244 (502)
Q Consensus 214 ---------------l~~L~~L~ls~N~-------l~~~~p~~~~~l---------------------------~~L~~L 244 (502)
+++|+.+++++|. +.+.+| .++.+ ++|+.|
T Consensus 174 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L 252 (520)
T 2z7x_B 174 TNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYF 252 (520)
T ss_dssp SSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEE
T ss_pred cCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEE
Confidence 3333444443332 111111 11111 134444
Q ss_pred EeeCccccccCCCCC-----cc---------------------------ccccEEECcCCcCcccCCccccCCCCCcEEE
Q 010736 245 SLVYNNLYGSIPPSL-----DN---------------------------LVLTKLSLDDNHFTSYLPQNICRGGALQIFT 292 (502)
Q Consensus 245 ~l~~N~l~~~~p~~~-----~~---------------------------~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ 292 (502)
++++|+++|.+|..+ .. ..++.|++++|.+.... ....+++|+.|+
T Consensus 253 ~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~ 330 (520)
T 2z7x_B 253 SISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLD 330 (520)
T ss_dssp EEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEE
T ss_pred EeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEE
Confidence 444444444444433 11 12444444444443321 114566777777
Q ss_pred ccCCccccccCcccccCCCCcEEeCCCCcccc--ccCcccCCCCCCcEEEccCcccccccCc-cccCCCCCCeeeecCCc
Q 010736 293 VSENRFQGTIPKSLRNCTSLIRVRLDGNNLTG--NISKAFGIYPNLTFIDLSRNNFYGEISS-NFGECPKLGALNISRNN 369 (502)
Q Consensus 293 ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~~L~~L~l~~N~ 369 (502)
+++|++++..|..+..+++|+.|++++|++++ .+|..+..+++|++|++++|++.+.+|. .+..+++|++|++++|.
T Consensus 331 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~ 410 (520)
T 2z7x_B 331 FSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNI 410 (520)
T ss_dssp CCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSC
T ss_pred eECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCC
Confidence 77777776667677777777777777777765 3445566777777777777777764443 36666777777777777
Q ss_pred ccc
Q 010736 370 ITG 372 (502)
Q Consensus 370 l~~ 372 (502)
+.+
T Consensus 411 l~~ 413 (520)
T 2z7x_B 411 LTD 413 (520)
T ss_dssp CCG
T ss_pred CCc
Confidence 654
No 29
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4e-33 Score=294.72 Aligned_cols=156 Identities=24% Similarity=0.277 Sum_probs=135.8
Q ss_pred EEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEcc
Q 010736 72 VINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYID 151 (502)
Q Consensus 72 v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 151 (502)
.+.++++++++++ +|.. +. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 33 ~~~l~ls~~~L~~-ip~~-~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 33 ESMVDYSNRNLTH-VPKD-LP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp CCEEECTTSCCCS-CCTT-SC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CcEEEcCCCCCcc-CCCC-CC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 3789999999995 7764 43 899999999999999888999999999999999999999889999999999999999
Q ss_pred CCcCcccCCcccCCCCCCcEEEcccCcccc-cCCcCCCCCCCCCeEEcccccccccCCccCcCCccC--Cccccccccc-
Q 010736 152 SNQLDGSIPLEVGQLSSMVELALFSNNLNG-SVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSI--SILSLAINQF- 227 (502)
Q Consensus 152 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~ls~N~l- 227 (502)
+|+++ .+|.. .+++|++|++++|++++ .+|..|+++++|++|++++|++++. .+..+++| +.|++++|++
T Consensus 109 ~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 109 HNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp TSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCC
T ss_pred CCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccc
Confidence 99999 56666 89999999999999997 4568899999999999999999863 45556666 9999999988
Q ss_pred -cCcccccccC
Q 010736 228 -SGPIPLSLGN 237 (502)
Q Consensus 228 -~~~~p~~~~~ 237 (502)
++..|..+..
T Consensus 183 ~~~~~~~~l~~ 193 (562)
T 3a79_B 183 IKGGETESLQI 193 (562)
T ss_dssp CCSSSCCEEEE
T ss_pred ccccCcccccc
Confidence 6666665554
No 30
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.5e-32 Score=270.83 Aligned_cols=283 Identities=22% Similarity=0.273 Sum_probs=241.6
Q ss_pred EEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCc
Q 010736 75 ISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQ 154 (502)
Q Consensus 75 L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 154 (502)
+++++++++ .+|.. + .++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|++++|+
T Consensus 38 l~~~~~~l~-~ip~~-~--~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 113 (332)
T 2ft3_A 38 VQCSDLGLK-AVPKE-I--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNH 113 (332)
T ss_dssp EECCSSCCS-SCCSC-C--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSC
T ss_pred EECCCCCcc-ccCCC-C--CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCc
Confidence 444455554 45543 3 3689999999999998888899999999999999999998889999999999999999999
Q ss_pred CcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEccccccc--ccCCccCcCCccCCccccccccccCccc
Q 010736 155 LDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFS--GFIPPDIGNLKSISILSLAINQFSGPIP 232 (502)
Q Consensus 155 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~ls~N~l~~~~p 232 (502)
++ .+|..+. ++|++|++++|++++..+..|..+++|++|++++|.++ +..+..+..+ +|+.|++++|++++ +|
T Consensus 114 l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~ 188 (332)
T 2ft3_A 114 LV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IP 188 (332)
T ss_dssp CC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CC
T ss_pred CC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cC
Confidence 98 5666655 79999999999999777777899999999999999996 4677888888 99999999999986 55
Q ss_pred ccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCC
Q 010736 233 LSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTS 311 (502)
Q Consensus 233 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~ 311 (502)
..+. ++|+.|++++|.+++..+..+.. ..|+.|++++|++++..+..+..+++|+.|++++|+++ .+|..+..+++
T Consensus 189 ~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~ 265 (332)
T 2ft3_A 189 KDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKL 265 (332)
T ss_dssp SSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTT
T ss_pred cccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCcc
Confidence 5544 78999999999999877777766 78999999999999988888999999999999999998 78888999999
Q ss_pred CcEEeCCCCccccccCcccCC------CCCCcEEEccCcccc--cccCccccCCCCCCeeeecCCc
Q 010736 312 LIRVRLDGNNLTGNISKAFGI------YPNLTFIDLSRNNFY--GEISSNFGECPKLGALNISRNN 369 (502)
Q Consensus 312 L~~L~l~~N~l~~~~~~~~~~------l~~L~~L~Ls~N~l~--~~~~~~~~~~~~L~~L~l~~N~ 369 (502)
|+.|++++|++++..+..|.. .+.|+.+++++|.+. +..+..+..+++|+.+++++|+
T Consensus 266 L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 266 LQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 999999999999877777654 477999999999987 5677889999999999999885
No 31
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.5e-33 Score=307.63 Aligned_cols=296 Identities=19% Similarity=0.219 Sum_probs=256.8
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcc--cCCCCCCcE
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHE--VGLMSHLKI 147 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--l~~l~~L~~ 147 (502)
..++.|+|+++...+.+++..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++.+|.. |+++++|++
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~ 127 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCE
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCE
Confidence 468899999999999998778999999999999999999999999999999999999999999877765 999999999
Q ss_pred EEccCCcCcccCC-cccCCCCCCcEEEcccCcccccCCcCCCCC--CCCCeEEcccccccccCCccCcCCcc------CC
Q 010736 148 LYIDSNQLDGSIP-LEVGQLSSMVELALFSNNLNGSVPHSLGNL--TQISMLFLHDNSFSGFIPPDIGNLKS------IS 218 (502)
Q Consensus 148 L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~------L~ 218 (502)
|+|++|.+++..+ ..|+++++|++|++++|.+++..|..+..+ ++|+.|++++|.+.+..|..++.+.+ |+
T Consensus 128 L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~ 207 (844)
T 3j0a_A 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLE 207 (844)
T ss_dssp EEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBS
T ss_pred EECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCcee
Confidence 9999999998765 579999999999999999999999888877 89999999999999888877776665 99
Q ss_pred ccccccccccCcccccccC--------------------------------------CCCCcEEEeeCccccccCCCCCc
Q 010736 219 ILSLAINQFSGPIPLSLGN--------------------------------------LTNLKQFSLVYNNLYGSIPPSLD 260 (502)
Q Consensus 219 ~L~ls~N~l~~~~p~~~~~--------------------------------------l~~L~~L~l~~N~l~~~~p~~~~ 260 (502)
.|++++|.+++..+..+.. .++|+.|++++|.+.+..|..+.
T Consensus 208 ~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~ 287 (844)
T 3j0a_A 208 ILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFE 287 (844)
T ss_dssp EEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSS
T ss_pred EEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhh
Confidence 9999999887665544322 25789999999999888777776
Q ss_pred c-ccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEE
Q 010736 261 N-LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFI 339 (502)
Q Consensus 261 ~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 339 (502)
. ..|+.|++++|++++..|..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+++..+..|..+++|++|
T Consensus 288 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 367 (844)
T 3j0a_A 288 TLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTL 367 (844)
T ss_dssp SCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEE
T ss_pred cCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEE
Confidence 6 789999999999999888889999999999999999998888899999999999999999988888889999999999
Q ss_pred EccCcccccccCccccCCCCCCeeeecCCcc
Q 010736 340 DLSRNNFYGEISSNFGECPKLGALNISRNNI 370 (502)
Q Consensus 340 ~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l 370 (502)
+|++|.+++.. .+++|+.|++++|++
T Consensus 368 ~Ls~N~l~~i~-----~~~~L~~L~l~~N~l 393 (844)
T 3j0a_A 368 DLRDNALTTIH-----FIPSIPDIFLSGNKL 393 (844)
T ss_dssp EEETCCSCCCS-----SCCSCSEEEEESCCC
T ss_pred ECCCCCCCccc-----CCCCcchhccCCCCc
Confidence 99999887422 245555555555544
No 32
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=3.3e-32 Score=268.15 Aligned_cols=268 Identities=23% Similarity=0.272 Sum_probs=224.8
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEc
Q 010736 95 PHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELAL 174 (502)
Q Consensus 95 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 174 (502)
++|++|+|++|++++..+..|+++++|++|+|++|.+++..|..|+.+++|++|++++|+++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 68999999999999888888999999999999999999888999999999999999999998 5666554 78999999
Q ss_pred ccCcccccCCcCCCCCCCCCeEEcccccccc--cCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCcccc
Q 010736 175 FSNNLNGSVPHSLGNLTQISMLFLHDNSFSG--FIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLY 252 (502)
Q Consensus 175 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 252 (502)
++|++++..+..+.++++|++|++++|.+.. ..+..+..+++|++|++++|+++. +|..+. ++|+.|++++|.++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKIT 205 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCC
Confidence 9999998777778899999999999999864 667788889999999999999884 555443 78999999999998
Q ss_pred ccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccC
Q 010736 253 GSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFG 331 (502)
Q Consensus 253 ~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 331 (502)
+..|..+.. ..|+.|++++|++++..+..+..+++|+.|++++|+++ .+|..+..+++|++|++++|++++..+..|.
T Consensus 206 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~ 284 (330)
T 1xku_A 206 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFC 284 (330)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSS
T ss_pred ccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcC
Confidence 777776666 68899999999998887778888899999999999998 7788888899999999999999877766664
Q ss_pred C------CCCCcEEEccCccccc--ccCccccCCCCCCeeeecCCc
Q 010736 332 I------YPNLTFIDLSRNNFYG--EISSNFGECPKLGALNISRNN 369 (502)
Q Consensus 332 ~------l~~L~~L~Ls~N~l~~--~~~~~~~~~~~L~~L~l~~N~ 369 (502)
. .+.++.+++++|.+.. ..|..+..++.++.+++++|+
T Consensus 285 ~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 285 PPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 3 3778899999998863 456778888999999998874
No 33
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=6.5e-32 Score=266.25 Aligned_cols=279 Identities=20% Similarity=0.238 Sum_probs=241.9
Q ss_pred CCccceeeeCCC----------CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEcc
Q 010736 58 PCAWSGISCNDA----------GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLG 127 (502)
Q Consensus 58 ~C~W~Gv~C~~~----------~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls 127 (502)
.|.|..+.|+.. ..++.|+++++++++..+. .|.++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 32 ~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKD-DFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTT-TTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHh-HhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 378999999742 2689999999999865544 59999999999999999999999999999999999999
Q ss_pred CCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCccc--ccCCcCCCCCCCCCeEEcccccccc
Q 010736 128 GNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLN--GSVPHSLGNLTQISMLFLHDNSFSG 205 (502)
Q Consensus 128 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~ 205 (502)
+|.++ .+|..+. ++|++|++++|++++..+..|..+++|+.|++++|.++ +..|..+..+ +|++|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 99999 6776665 89999999999999777778999999999999999996 4778888888 99999999999996
Q ss_pred cCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccC
Q 010736 206 FIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICR 284 (502)
Q Consensus 206 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~ 284 (502)
+|..+. ++|+.|++++|++++..+..+..+++|+.|++++|++++..+..+.. ..|+.|++++|+++. +|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSR-VPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCB-CCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCee-cChhhhc
Confidence 555544 78999999999999988899999999999999999999877766666 789999999999994 7788999
Q ss_pred CCCCcEEEccCCccccccCccccc------CCCCcEEeCCCCccc--cccCcccCCCCCCcEEEccCcc
Q 010736 285 GGALQIFTVSENRFQGTIPKSLRN------CTSLIRVRLDGNNLT--GNISKAFGIYPNLTFIDLSRNN 345 (502)
Q Consensus 285 ~~~L~~L~ls~n~l~~~~~~~l~~------l~~L~~L~l~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~ 345 (502)
+++|+.|++++|++++..+..|.. ...|+.+++++|.+. +..+..|..+++|+.+++++|+
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 999999999999999776666654 367899999999987 5677889999999999999884
No 34
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=7.6e-32 Score=288.64 Aligned_cols=181 Identities=19% Similarity=0.192 Sum_probs=144.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCccceeeeCCCCCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCC
Q 010736 40 SLLSSWIKDTSNVSSKISPCAWSGISCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLT 119 (502)
Q Consensus 40 ~~l~~W~~~~~~~~~~~~~C~W~Gv~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~ 119 (502)
..++.|+.. -|..|..-.|.... +.++.++.+|+ .+|.. +. +++++|||++|+|++..|..|.+++
T Consensus 11 ~~~~~~~~~--------~p~~~~~c~~~~~~--~~~~c~~~~l~-~vP~~-lp--~~~~~LdLs~N~i~~l~~~~f~~l~ 76 (635)
T 4g8a_A 11 DKLAAANSS--------IPESWEPCVEVVPN--ITYQCMELNFY-KIPDN-LP--FSTKNLDLSFNPLRHLGSYSFFSFP 76 (635)
T ss_dssp ----------------------CCSEEEETT--TEEECTTSCCS-SCCSS-SC--TTCCEEECTTSCCCEECTTTTTTCT
T ss_pred chhhcccCC--------CCCCCCCccccCCC--CEEECCCCCcC-ccCCC-CC--cCCCEEEeeCCCCCCCCHHHHhCCC
Confidence 345666543 47788876664333 34678888887 56653 32 4799999999999988888999999
Q ss_pred CCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcc
Q 010736 120 NLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLH 199 (502)
Q Consensus 120 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 199 (502)
+|++|+|++|+|++..|.+|.++++|++|+|++|++++..+..|.++++|++|++++|++++..+..|+++++|++|+++
T Consensus 77 ~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls 156 (635)
T 4g8a_A 77 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVA 156 (635)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccc
Confidence 99999999999998888899999999999999999998888889999999999999999998877889999999999999
Q ss_pred ccccccc-CCccCcCCccCCccccccccccCccccc
Q 010736 200 DNSFSGF-IPPDIGNLKSISILSLAINQFSGPIPLS 234 (502)
Q Consensus 200 ~N~l~~~-~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 234 (502)
+|.+++. .|..++.+++|++|++++|++++..+..
T Consensus 157 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 192 (635)
T 4g8a_A 157 HNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 192 (635)
T ss_dssp SSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred cCccccCCCchhhccchhhhhhcccCcccccccccc
Confidence 9999864 5788899999999999999887655443
No 35
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=3.8e-31 Score=260.57 Aligned_cols=267 Identities=19% Similarity=0.260 Sum_probs=237.2
Q ss_pred CCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcc
Q 010736 96 HLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALF 175 (502)
Q Consensus 96 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 175 (502)
+++.++++++.++ .+|..+. +.|++|+|++|++++..+..|+++++|++|++++|++++..|..|..+++|++|+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 5677777777777 4666554 689999999999998888889999999999999999998889999999999999999
Q ss_pred cCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccC--cccccccCCCCCcEEEeeCccccc
Q 010736 176 SNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSG--PIPLSLGNLTNLKQFSLVYNNLYG 253 (502)
Q Consensus 176 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~ 253 (502)
+|+++ .+|..+. ++|++|++++|++++..+..+..+++|+.|++++|.++. ..+..+.++++|+.|++++|.++
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~- 184 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT- 184 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-
Confidence 99998 5666554 799999999999998888889999999999999999964 67788999999999999999998
Q ss_pred cCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCC
Q 010736 254 SIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIY 333 (502)
Q Consensus 254 ~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l 333 (502)
.+|..+. ..|++|++++|++++..+..+..+++|+.|++++|.+++..+..+..+++|++|++++|+++ .+|..+..+
T Consensus 185 ~l~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 262 (330)
T 1xku_A 185 TIPQGLP-PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADH 262 (330)
T ss_dssp SCCSSCC-TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTC
T ss_pred cCCcccc-ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccC
Confidence 4665544 78999999999999988999999999999999999999888888999999999999999998 677889999
Q ss_pred CCCcEEEccCcccccccCccccC------CCCCCeeeecCCccc
Q 010736 334 PNLTFIDLSRNNFYGEISSNFGE------CPKLGALNISRNNIT 371 (502)
Q Consensus 334 ~~L~~L~Ls~N~l~~~~~~~~~~------~~~L~~L~l~~N~l~ 371 (502)
++|++|++++|++++..+..|.. .+.++.+++++|++.
T Consensus 263 ~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 263 KYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp SSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred CCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccc
Confidence 99999999999999877766643 478899999999985
No 36
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.7e-32 Score=289.06 Aligned_cols=171 Identities=21% Similarity=0.216 Sum_probs=148.8
Q ss_pred eeeCCCCCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCC
Q 010736 64 ISCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMS 143 (502)
Q Consensus 64 v~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 143 (502)
..|... .+ .++++++++ .+|.. +. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|++++
T Consensus 2 ~~C~~~-~~--c~~~~~~l~-~ip~~-~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~ 74 (549)
T 2z81_A 2 LSCDAS-GV--CDGRSRSFT-SIPSG-LT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLG 74 (549)
T ss_dssp CEECTT-SE--EECTTSCCS-SCCSC-CC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred ccCCCC-ce--EECCCCccc-ccccc-CC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccc
Confidence 368653 34 789999988 56664 43 7999999999999999999999999999999999999998889999999
Q ss_pred CCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccc-cCCcCCCCCCCCCeEEcccccccccC-CccCcCCccCCccc
Q 010736 144 HLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNG-SVPHSLGNLTQISMLFLHDNSFSGFI-PPDIGNLKSISILS 221 (502)
Q Consensus 144 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ 221 (502)
+|++|++++|++++..|..|+.+++|++|++++|++++ ..|..++++++|++|++++|.+.+.+ +..+..+++|++|+
T Consensus 75 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~ 154 (549)
T 2z81_A 75 SLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELE 154 (549)
T ss_dssp TCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEE
T ss_pred cCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeee
Confidence 99999999999998888889999999999999999986 46778999999999999999854444 46899999999999
Q ss_pred cccccccCcccccccCCCCC
Q 010736 222 LAINQFSGPIPLSLGNLTNL 241 (502)
Q Consensus 222 ls~N~l~~~~p~~~~~l~~L 241 (502)
+++|++++..|..++.+++|
T Consensus 155 L~~n~l~~~~~~~l~~l~~L 174 (549)
T 2z81_A 155 IKALSLRNYQSQSLKSIRDI 174 (549)
T ss_dssp EEETTCCEECTTTTTTCSEE
T ss_pred ccCCcccccChhhhhccccC
Confidence 99999998888777654433
No 37
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.98 E-value=2.1e-31 Score=268.56 Aligned_cols=266 Identities=17% Similarity=0.212 Sum_probs=192.6
Q ss_pred CCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcE
Q 010736 92 SSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVE 171 (502)
Q Consensus 92 ~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 171 (502)
..++++++|++++|.++...+..|.++++|++|+|++|.+++..|..|+.+++|++|++++|++++..|..|+.+++|++
T Consensus 42 ~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 42 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 34689999999999999766666899999999999999999888889999999999999999999888888999999999
Q ss_pred EEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccc
Q 010736 172 LALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNL 251 (502)
Q Consensus 172 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 251 (502)
|++++|+++...+..|..+++|++|++++|++++..|..+..+++|++|++++|++++. .+..+++|+.|++++|.+
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLL 198 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCC
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccc
Confidence 99999999965555579999999999999999998888999999999999999999864 356788999999999998
Q ss_pred cccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccC
Q 010736 252 YGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFG 331 (502)
Q Consensus 252 ~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 331 (502)
++.... ..++.|++++|.++... .. ..++|+.|++++|.+++. ..+..+++|+.|++++|.+++..+..+.
T Consensus 199 ~~~~~~----~~L~~L~l~~n~l~~~~-~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~ 269 (390)
T 3o6n_A 199 STLAIP----IAVEELDASHNSINVVR-GP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFV 269 (390)
T ss_dssp SEEECC----SSCSEEECCSSCCCEEE-CC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred cccCCC----CcceEEECCCCeeeecc-cc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHcc
Confidence 753211 24555555555554431 11 123445555555544432 2344444555555555555444444444
Q ss_pred CCCCCcEEEccCcccccccCccccCCCCCCeeeecCCcc
Q 010736 332 IYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNI 370 (502)
Q Consensus 332 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l 370 (502)
.+++|+.|++++|++++ ++..+..+++|++|++++|++
T Consensus 270 ~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l 307 (390)
T 3o6n_A 270 KMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHL 307 (390)
T ss_dssp TCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCC
T ss_pred ccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcc
Confidence 44555555555554443 233334444455555554444
No 38
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.98 E-value=1.9e-31 Score=283.61 Aligned_cols=273 Identities=18% Similarity=0.215 Sum_probs=233.8
Q ss_pred CCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEE
Q 010736 93 SFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVEL 172 (502)
Q Consensus 93 ~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 172 (502)
.+++++.|++++|.++...+..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 46789999999999998777778999999999999999999888899999999999999999999888889999999999
Q ss_pred EcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCcccc
Q 010736 173 ALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLY 252 (502)
Q Consensus 173 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 252 (502)
+|++|.+++..+..|+.+++|++|++++|.+++..|..|+.+++|++|++++|.+++.. +..+++|+.|++++|.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 99999999766666899999999999999999999999999999999999999998753 344556666666666554
Q ss_pred cc-CCCCC----------------ccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEE
Q 010736 253 GS-IPPSL----------------DNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRV 315 (502)
Q Consensus 253 ~~-~p~~~----------------~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L 315 (502)
+. .|..+ ....|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..|..+++|+.|
T Consensus 206 ~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 283 (597)
T 3oja_B 206 TLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERL 283 (597)
T ss_dssp EEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEE
T ss_pred cccCCchhheeeccCCcccccccccCCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEE
Confidence 31 11111 114688888888888873 678888999999999999998889999999999999
Q ss_pred eCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCcccc
Q 010736 316 RLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITG 372 (502)
Q Consensus 316 ~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~ 372 (502)
+|++|.+++. +..+..+++|+.|+|++|.+. .+|..+..+++|++|++++|++++
T Consensus 284 ~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~ 338 (597)
T 3oja_B 284 YISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT 338 (597)
T ss_dssp ECTTSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC
T ss_pred ECCCCCCCCC-CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCC
Confidence 9999999864 566677899999999999998 567778889999999999999864
No 39
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.98 E-value=4.5e-32 Score=269.71 Aligned_cols=284 Identities=17% Similarity=0.201 Sum_probs=213.9
Q ss_pred CCCCccceeeeCCCCCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCC
Q 010736 56 ISPCAWSGISCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNI 135 (502)
Q Consensus 56 ~~~C~W~Gv~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~ 135 (502)
..+|.|.|+ |+ +++++++ .+|.. +. ++|++|++++|++++..+..|.++++|++|+|++|++++..
T Consensus 27 ~~~C~~~~~-c~---------~~~~~l~-~iP~~-~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 92 (353)
T 2z80_A 27 SLSCDRNGI-CK---------GSSGSLN-SIPSG-LT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIE 92 (353)
T ss_dssp CCEECTTSE-EE---------CCSTTCS-SCCTT-CC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEEC
T ss_pred CCCCCCCeE-ee---------CCCCCcc-ccccc-cc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccC
Confidence 457899887 64 3445555 45543 33 58999999999999877778999999999999999999888
Q ss_pred CcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCC-cCCCCCCCCCeEEcccc-cccccCCccCcC
Q 010736 136 PHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVP-HSLGNLTQISMLFLHDN-SFSGFIPPDIGN 213 (502)
Q Consensus 136 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~ 213 (502)
|..|+++++|++|++++|++++..+..|..+++|++|++++|++++..+ ..+..+++|++|++++| .+.+..+..+..
T Consensus 93 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 172 (353)
T 2z80_A 93 EDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAG 172 (353)
T ss_dssp TTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT
T ss_pred HhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccC
Confidence 8889999999999999999996655568999999999999999985433 47889999999999998 577777788888
Q ss_pred CccCCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCc--cccccEEECcCCcCcccCCccccCCCCCcEE
Q 010736 214 LKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLD--NLVLTKLSLDDNHFTSYLPQNICRGGALQIF 291 (502)
Q Consensus 214 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L 291 (502)
+++|++|++++|++++..|..+..+++|++|++++|.++ .+|..+. ...|+.|++++|++++..+..+..
T Consensus 173 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~------- 244 (353)
T 2z80_A 173 LTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELST------- 244 (353)
T ss_dssp CCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC-----------
T ss_pred CCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCcccccccccccc-------
Confidence 999999999999998888888888899999999888875 3332221 145666666666665543322211
Q ss_pred EccCCccccccCcccccCCCCcEEeCCCCcccc----ccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecC
Q 010736 292 TVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTG----NISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISR 367 (502)
Q Consensus 292 ~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~ 367 (502)
......++.++++++.+.+ .+|..+..+++|+.|++++|+++...+..+..+++|++|++++
T Consensus 245 --------------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 310 (353)
T 2z80_A 245 --------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHT 310 (353)
T ss_dssp ----------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred --------------ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeC
Confidence 1123345555555555544 2455677788888888888888844444468889999999999
Q ss_pred CccccccC
Q 010736 368 NNITGDFG 375 (502)
Q Consensus 368 N~l~~dfG 375 (502)
|++.||+-
T Consensus 311 N~~~~~~~ 318 (353)
T 2z80_A 311 NPWDCSCP 318 (353)
T ss_dssp SCBCCCHH
T ss_pred CCccCcCC
Confidence 99999884
No 40
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.98 E-value=4.4e-31 Score=261.85 Aligned_cols=284 Identities=24% Similarity=0.386 Sum_probs=188.0
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEE
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILY 149 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 149 (502)
.+++.++++++++.. ++. +..+++|++|++++|++++. |. +.++++|++|++++|.++. +| .+..+++|++|+
T Consensus 44 ~~L~~L~l~~~~i~~-~~~--~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~ 116 (347)
T 4fmz_A 44 ESITKLVVAGEKVAS-IQG--IEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELY 116 (347)
T ss_dssp TTCSEEECCSSCCCC-CTT--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEE
T ss_pred ccccEEEEeCCcccc-chh--hhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEE
Confidence 356677777777653 332 66677777777777777643 33 7777777777777777764 33 577777777777
Q ss_pred ccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccC
Q 010736 150 IDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSG 229 (502)
Q Consensus 150 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 229 (502)
+++|++++..+ +..+++|+.|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++
T Consensus 117 l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 117 LNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp CTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC
T ss_pred CcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc
Confidence 77777764332 6677777777777775554433 36677777777777777765433 6667777777777777765
Q ss_pred cccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCccccc
Q 010736 230 PIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRN 308 (502)
Q Consensus 230 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~ 308 (502)
..+ +..+++|+.|++++|.+++..+ +.. ..|++|++++|++++..+ +..+++|+.|++++|.+++. ..+..
T Consensus 192 ~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~ 263 (347)
T 4fmz_A 192 ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKD 263 (347)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTT
T ss_pred ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhc
Confidence 433 6667777777777777664332 222 567777777777766433 66677777777777777643 34666
Q ss_pred CCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCccccccC
Q 010736 309 CTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGDFG 375 (502)
Q Consensus 309 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~dfG 375 (502)
+++|++|++++|++++. ..+..+++|+.|++++|++.+..+..+..+++|++|++++|++.+...
T Consensus 264 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 264 LTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred CCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 77777777777777653 346666777777777777776666667777777777777777665433
No 41
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=1e-30 Score=259.18 Aligned_cols=280 Identities=22% Similarity=0.321 Sum_probs=243.5
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEE
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILY 149 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 149 (502)
.+++.|+++++.+++ +++ +..+++|++|++++|.+++ +| .+.++++|++|++++|.+++. |. +..+++|++|+
T Consensus 66 ~~L~~L~l~~n~i~~-~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~ 138 (347)
T 4fmz_A 66 TNLEYLNLNGNQITD-ISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISDI-SP-LANLTKMYSLN 138 (347)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCCC-GG-GTTCTTCCEEE
T ss_pred CCccEEEccCCcccc-chh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccCc-hh-hccCCceeEEE
Confidence 479999999999985 333 8999999999999999986 34 699999999999999999954 43 89999999999
Q ss_pred ccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccC
Q 010736 150 IDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSG 229 (502)
Q Consensus 150 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 229 (502)
+++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++
T Consensus 139 l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 213 (347)
T 4fmz_A 139 LGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITD 213 (347)
T ss_dssp CTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCC
Confidence 99997665544 48999999999999999986544 8899999999999999986543 8889999999999999997
Q ss_pred cccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCccccc
Q 010736 230 PIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRN 308 (502)
Q Consensus 230 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~ 308 (502)
..+ +..+++|+.|++++|.+++..+ +.. ..|++|++++|.+++. ..+..+++|+.|++++|++++. ..+..
T Consensus 214 ~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~ 285 (347)
T 4fmz_A 214 ITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNN 285 (347)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGG
T ss_pred Cch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcC
Confidence 655 8889999999999999985443 333 7899999999999885 5688999999999999999864 46889
Q ss_pred CCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCccc
Q 010736 309 CTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNIT 371 (502)
Q Consensus 309 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~ 371 (502)
+++|+.|++++|.+++..+..+..+++|++|++++|++++..| +..+++|++|++++|+|.
T Consensus 286 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 286 LSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 9999999999999998888889999999999999999997766 888999999999999975
No 42
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=9.9e-31 Score=269.91 Aligned_cols=282 Identities=23% Similarity=0.334 Sum_probs=169.7
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEE
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILY 149 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 149 (502)
.+++.|+|+++.+++.. + +..+++|++|++++|.+++..| ++++++|++|++++|.+++..+ +..+++|++|+
T Consensus 68 ~~L~~L~Ls~n~l~~~~-~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 140 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDIT-P--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLE 140 (466)
T ss_dssp TTCCEEECCSSCCCCCG-G--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred cCCCEEECCCCccCCch-h--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEE
Confidence 46888889888887643 2 7888888888888888886554 8888888888888888875432 77788888888
Q ss_pred ccCCcCcccCC-------------------cccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCcc
Q 010736 150 IDSNQLDGSIP-------------------LEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPD 210 (502)
Q Consensus 150 Ls~N~l~~~~p-------------------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 210 (502)
+++|++++... ..+..+++|++|++++|.+++. + .+..+++|++|++++|.+++..|
T Consensus 141 l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~-- 216 (466)
T 1o6v_A 141 LSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI-S-VLAKLTNLESLIATNNQISDITP-- 216 (466)
T ss_dssp EEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCSEEECCSSCCCCCGG--
T ss_pred CCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC-h-hhccCCCCCEEEecCCccccccc--
Confidence 88877764211 1255667777777777777643 2 36667777777777777765544
Q ss_pred CcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCC----------
Q 010736 211 IGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLP---------- 279 (502)
Q Consensus 211 ~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~---------- 279 (502)
++.+++|+.|++++|++++. ..+..+++|+.|++++|.+++..+ +.. ..|+.|++++|++++..+
T Consensus 217 ~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L 292 (466)
T 1o6v_A 217 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNL 292 (466)
T ss_dssp GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEE
T ss_pred ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccccccCCCccCeE
Confidence 45556666666666665532 234555555555555555553322 211 345555555555544322
Q ss_pred ----------ccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccc
Q 010736 280 ----------QNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGE 349 (502)
Q Consensus 280 ----------~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 349 (502)
..+..+++|+.|++++|++++..| +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++.
T Consensus 293 ~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~ 368 (466)
T 1o6v_A 293 ELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDL 368 (466)
T ss_dssp ECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBC
T ss_pred EcCCCcccCchhhcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCcc
Confidence 013444445555555555544333 44455555555555555443 2445555555555555555554
Q ss_pred cCccccCCCCCCeeeecCCcccc
Q 010736 350 ISSNFGECPKLGALNISRNNITG 372 (502)
Q Consensus 350 ~~~~~~~~~~L~~L~l~~N~l~~ 372 (502)
.| +..+++|++|++++|++++
T Consensus 369 ~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 369 TP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp GG--GTTCTTCCEEECCCEEEEC
T ss_pred ch--hhcCCCCCEEeccCCcccC
Confidence 44 5555566666666665543
No 43
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=9.4e-31 Score=268.08 Aligned_cols=254 Identities=19% Similarity=0.170 Sum_probs=181.3
Q ss_pred EEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCc
Q 010736 75 ISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQ 154 (502)
Q Consensus 75 L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 154 (502)
++.++.+++ .+|.. +. ++++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|+
T Consensus 48 v~c~~~~l~-~iP~~-~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 48 VICVRKNLR-EVPDG-IS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp EECCSCCCS-SCCSC-CC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred EEeCCCCcC-cCCCC-CC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 444444554 44443 32 577788888888887777778888888888888888776666777777777777777777
Q ss_pred CcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCccccc
Q 010736 155 LDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLS 234 (502)
Q Consensus 155 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 234 (502)
+++..+..|..+++|++|++++|+++...+..|..+++|++|++++|+..+. ..+..
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~-----------------------i~~~~ 180 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY-----------------------ISEGA 180 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCE-----------------------ECTTT
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcce-----------------------eCcch
Confidence 7755555667777777777777776655555566666666666665322211 12224
Q ss_pred ccCCCCCcEEEeeCccccccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcE
Q 010736 235 LGNLTNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIR 314 (502)
Q Consensus 235 ~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~ 314 (502)
|.++++|+.|++++|+++ .+| .+..+++|+.|++++|++++..+..|.++++|+.
T Consensus 181 ~~~l~~L~~L~L~~n~l~-~~~------------------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 235 (440)
T 3zyj_A 181 FEGLSNLRYLNLAMCNLR-EIP------------------------NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQK 235 (440)
T ss_dssp TTTCSSCCEEECTTSCCS-SCC------------------------CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred hhcccccCeecCCCCcCc-ccc------------------------ccCCCcccCEEECCCCccCccChhhhccCccCCE
Confidence 455555666666665554 222 1334556777777777777666777888888888
Q ss_pred EeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCccccccCccccc
Q 010736 315 VRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFL 380 (502)
Q Consensus 315 L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~dfGl~~ll 380 (502)
|++++|++++..+..|..+++|+.|+|++|++++..+..+..+++|++|++++|++.|||.+.++.
T Consensus 236 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l~~l~ 301 (440)
T 3zyj_A 236 LWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLS 301 (440)
T ss_dssp EECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTTHHHH
T ss_pred EECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCchHHH
Confidence 888888888888888889999999999999999888888899999999999999999999988764
No 44
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=1.6e-30 Score=267.22 Aligned_cols=238 Identities=21% Similarity=0.190 Sum_probs=176.4
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEc
Q 010736 95 PHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELAL 174 (502)
Q Consensus 95 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 174 (502)
+++++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|++
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 57788888888888777777888888888888888887777777777778888888877777665566777777777777
Q ss_pred ccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCcccccc
Q 010736 175 FSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGS 254 (502)
Q Consensus 175 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 254 (502)
++|+++...+..|.++++|++|++++|...+. ..+..|.++++|+.|++++|++++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~-----------------------i~~~~~~~l~~L~~L~L~~n~l~~- 210 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEY-----------------------ISEGAFEGLFNLKYLNLGMCNIKD- 210 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCE-----------------------ECTTTTTTCTTCCEEECTTSCCSS-
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccc-----------------------cChhhccCCCCCCEEECCCCcccc-
Confidence 77777655555666666666666665322211 112234455556666666665542
Q ss_pred CCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCC
Q 010736 255 IPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYP 334 (502)
Q Consensus 255 ~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 334 (502)
+| .+..+++|+.|++++|.+++..|..|.++++|+.|++++|++++..+..|..++
T Consensus 211 ~~------------------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 266 (452)
T 3zyi_A 211 MP------------------------NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLA 266 (452)
T ss_dssp CC------------------------CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred cc------------------------cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCC
Confidence 11 133456677777777777777777788888888888888988888888888999
Q ss_pred CCcEEEccCcccccccCccccCCCCCCeeeecCCccccccCccccc
Q 010736 335 NLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFL 380 (502)
Q Consensus 335 ~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~dfGl~~ll 380 (502)
+|+.|+|++|++++..+..+..+++|++|++++|++.|||.+.++.
T Consensus 267 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~~~l~ 312 (452)
T 3zyi_A 267 SLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLA 312 (452)
T ss_dssp TCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTTHHHH
T ss_pred CCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCchHHH
Confidence 9999999999999877888889999999999999999999987653
No 45
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=4.6e-31 Score=279.35 Aligned_cols=299 Identities=23% Similarity=0.229 Sum_probs=218.4
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEE
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILY 149 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 149 (502)
.+++.|+|+++++++..+. .|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSY-SFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCEECTT-TTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCccChh-HhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 4689999999999976554 599999999999999999998899999999999999999999988889999999999999
Q ss_pred ccCCcCcccCCcccCCCCCCcEEEcccCcccc-cCCcCCCCCCCCCeEEcccccccccCCccCcCCccC----Ccccccc
Q 010736 150 IDSNQLDGSIPLEVGQLSSMVELALFSNNLNG-SVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSI----SILSLAI 224 (502)
Q Consensus 150 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L----~~L~ls~ 224 (502)
+++|++++..+..++.+++|++|++++|.+++ .+|..++++++|++|++++|++++..+..++.+++| ..+++++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 99999997766679999999999999999987 479999999999999999999999888889888888 8899999
Q ss_pred ccccCcccc-----------------------------------------------------------------------
Q 010736 225 NQFSGPIPL----------------------------------------------------------------------- 233 (502)
Q Consensus 225 N~l~~~~p~----------------------------------------------------------------------- 233 (502)
|.+++..|.
T Consensus 187 n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 187 NPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 877654332
Q ss_pred ----------cccCCCCCcEEEeeCccccccCCCCCcc------------------------------------------
Q 010736 234 ----------SLGNLTNLKQFSLVYNNLYGSIPPSLDN------------------------------------------ 261 (502)
Q Consensus 234 ----------~~~~l~~L~~L~l~~N~l~~~~p~~~~~------------------------------------------ 261 (502)
.+..+++|+.|++++|.++ .+|..+..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~ 345 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVD 345 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCB
T ss_pred chhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccccccc
Confidence 2344566777777777665 34433322
Q ss_pred -ccccEEECcCCcCcccC--CccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccC-cccCCCCCCc
Q 010736 262 -LVLTKLSLDDNHFTSYL--PQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNIS-KAFGIYPNLT 337 (502)
Q Consensus 262 -~~L~~L~ls~N~l~~~~--~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~ 337 (502)
..|+.|++++|++++.. +..+..+++|+.|++++|.+++..+. +..+++|+.|++++|.+.+..+ ..+..+++|+
T Consensus 346 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 424 (570)
T 2z63_A 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 424 (570)
T ss_dssp CTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCC
T ss_pred CCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCC
Confidence 23344444444443321 23344444555555555554433222 5555555555665555554443 3455566666
Q ss_pred EEEccCcccccccCccccCCCCCCeeeecCCccc
Q 010736 338 FIDLSRNNFYGEISSNFGECPKLGALNISRNNIT 371 (502)
Q Consensus 338 ~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~ 371 (502)
+|++++|++.+..+..+..+++|++|++++|.+.
T Consensus 425 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 458 (570)
T 2z63_A 425 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 458 (570)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEG
T ss_pred EEeCcCCcccccchhhhhcCCcCcEEECcCCcCc
Confidence 6666666666555556666666666666666554
No 46
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=3.3e-31 Score=258.13 Aligned_cols=283 Identities=20% Similarity=0.185 Sum_probs=219.7
Q ss_pred CCccceeeeCCCCCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcC--CC
Q 010736 58 PCAWSGISCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSG--NI 135 (502)
Q Consensus 58 ~C~W~Gv~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~--~~ 135 (502)
.|.|.+|.|+.. +++ .+|.. + .++|++|+|++|+++...+..|.++++|++|+|++|.++. ..
T Consensus 6 ~C~~~~l~c~~~-----------~l~-~ip~~-~--~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 70 (306)
T 2z66_A 6 SCSGTEIRCNSK-----------GLT-SVPTG-I--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCC 70 (306)
T ss_dssp EEETTEEECCSS-----------CCS-SCCSC-C--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEE
T ss_pred eeCCCEEEcCCC-----------Ccc-cCCCC-C--CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCc
Confidence 378999999752 122 23332 2 3678899999999886555567889999999999998873 33
Q ss_pred CcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCC-cCCCCCCCCCeEEcccccccccCCccCcCC
Q 010736 136 PHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVP-HSLGNLTQISMLFLHDNSFSGFIPPDIGNL 214 (502)
Q Consensus 136 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 214 (502)
|..+..+++|++|++++|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+..+..+..+
T Consensus 71 ~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 149 (306)
T 2z66_A 71 SQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 149 (306)
T ss_dssp EHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTC
T ss_pred ccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccC
Confidence 666777889999999999887 466778889999999999999886554 578888999999999999988888888888
Q ss_pred ccCCccccccccccC-cccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCCcEEE
Q 010736 215 KSISILSLAINQFSG-PIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIFT 292 (502)
Q Consensus 215 ~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ 292 (502)
++|++|++++|.+++ .+|..+..+++|+.|++++|.+++..|..+.. ..|+.|++++|++++..+..+..+++|+.|+
T Consensus 150 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 229 (306)
T 2z66_A 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 229 (306)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEE
T ss_pred cCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeE
Confidence 999999999998886 57888888999999999999998877777766 6899999999999887777888889999999
Q ss_pred ccCCccccccCcccccC-CCCcEEeCCCCccccccCc-c-cCCCCCCcEEEccCcccccccCccccC
Q 010736 293 VSENRFQGTIPKSLRNC-TSLIRVRLDGNNLTGNISK-A-FGIYPNLTFIDLSRNNFYGEISSNFGE 356 (502)
Q Consensus 293 ls~n~l~~~~~~~l~~l-~~L~~L~l~~N~l~~~~~~-~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 356 (502)
+++|++++..+..+..+ ++|++|++++|.+++.... . ...+...+.+.+..+.+....|..+..
T Consensus 230 L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g 296 (306)
T 2z66_A 230 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQG 296 (306)
T ss_dssp CTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTT
T ss_pred CCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCC
Confidence 99999998888888887 4899999999998764321 1 111223333445556666666665544
No 47
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.97 E-value=6.5e-30 Score=262.35 Aligned_cols=276 Identities=18% Similarity=0.192 Sum_probs=148.0
Q ss_pred CEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEc
Q 010736 71 RVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYI 150 (502)
Q Consensus 71 ~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 150 (502)
+++.|+++++++++. | .++.+++|++|+|++|++++. | ++++++|++|++++|++++. | ++.+++|++|++
T Consensus 43 ~L~~L~Ls~n~l~~~-~--~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T--GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNC 113 (457)
T ss_dssp TCCEEECCSSCCCCC-T--TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCEEEccCCCcccC-h--hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEEC
Confidence 455566666665542 2 255556666666666665543 2 55556666666666665542 2 555556666666
Q ss_pred cCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCc
Q 010736 151 DSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGP 230 (502)
Q Consensus 151 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 230 (502)
++|++++ +| ++.+++|++|++++|++++. + ++.+++|++|++++|+..+.+ .+..+++|+.|++++|++++
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~- 184 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE- 184 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-
Confidence 6665554 22 55555555555555555542 2 444455555555555333332 23444444444444444443
Q ss_pred cc-------------------ccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCC----
Q 010736 231 IP-------------------LSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGG---- 286 (502)
Q Consensus 231 ~p-------------------~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~---- 286 (502)
+| ..++.+++|+.|++++|++++ +| +.. ..|+.|++++|++++..+..+..+.
T Consensus 185 l~l~~l~~L~~L~l~~N~l~~~~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l 261 (457)
T 3bz5_A 185 LDVSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHC 261 (457)
T ss_dssp CCCTTCTTCCEEECCSSCCSCCCCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEEC
T ss_pred eccccCCCCCEEECcCCcCCeeccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEec
Confidence 22 024444555555555555543 23 222 4455555555555543322222221
Q ss_pred ---CCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCc--------ccCCCCCCcEEEccCcccccccCcccc
Q 010736 287 ---ALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISK--------AFGIYPNLTFIDLSRNNFYGEISSNFG 355 (502)
Q Consensus 287 ---~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~--------~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 355 (502)
+|+.|++++|.+.+.+| +..+++|+.|++++|...+.+|. .+...++|++|++++|++++. .++
T Consensus 262 ~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l---~l~ 336 (457)
T 3bz5_A 262 IQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL---DVS 336 (457)
T ss_dssp TTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC---CCT
T ss_pred cCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc---ccc
Confidence 22333333333333333 34556777777777765554432 245567888888888888874 377
Q ss_pred CCCCCCeeeecCCcccc
Q 010736 356 ECPKLGALNISRNNITG 372 (502)
Q Consensus 356 ~~~~L~~L~l~~N~l~~ 372 (502)
.+++|+.|++++|++.+
T Consensus 337 ~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 337 HNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp TCTTCSEEECCSSCCCB
T ss_pred cCCcCcEEECCCCCCCC
Confidence 88888888888888864
No 48
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.97 E-value=8.3e-30 Score=261.58 Aligned_cols=271 Identities=18% Similarity=0.206 Sum_probs=193.1
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEE
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILY 149 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 149 (502)
.+++.|+++++++++. + ++.+++|++|++++|++++. | ++++++|++|++++|++++ +| ++.+++|++|+
T Consensus 64 ~~L~~L~Ls~n~l~~~-~---~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~ 133 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D---LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLN 133 (457)
T ss_dssp TTCSEEECCSSCCSCC-C---CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCeE-c---cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEE
Confidence 3566667776666652 1 66666666666666666653 2 6666666666666666664 33 55666666666
Q ss_pred ccCCcCcccCC--------------------cccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCc
Q 010736 150 IDSNQLDGSIP--------------------LEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPP 209 (502)
Q Consensus 150 Ls~N~l~~~~p--------------------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 209 (502)
+++|++++. + ..+..+++|++|++++|++++ +| +..+++|+.|++++|++++.
T Consensus 134 l~~N~l~~l-~l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--- 206 (457)
T 3bz5_A 134 CARNTLTEI-DVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--- 206 (457)
T ss_dssp CTTSCCSCC-CCTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---
T ss_pred CCCCcccee-ccccCCcCCEEECCCCCcccccccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---
Confidence 666666542 1 025556667777777777765 34 66777888888888888765
Q ss_pred cCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCcc--------ccccEEECcCCcCcccCCcc
Q 010736 210 DIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN--------LVLTKLSLDDNHFTSYLPQN 281 (502)
Q Consensus 210 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~--------~~L~~L~ls~N~l~~~~~~~ 281 (502)
.++.+++|+.|++++|++++ +| ++.+++|+.|++++|++++..+..+.. ..++.+++++|.+.+.+|
T Consensus 207 ~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~-- 281 (457)
T 3bz5_A 207 DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ-- 281 (457)
T ss_dssp CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--
T ss_pred ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--
Confidence 37788999999999999997 55 889999999999999999765544432 145667777777666655
Q ss_pred ccCCCCCcEEEccCCccccccCc--------ccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCcc
Q 010736 282 ICRGGALQIFTVSENRFQGTIPK--------SLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSN 353 (502)
Q Consensus 282 ~~~~~~L~~L~ls~n~l~~~~~~--------~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 353 (502)
+..+++|+.|++++|...+.+|. .+..+++|+.|++++|++++. .+..+++|+.|++++|++++.
T Consensus 282 ~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~~N~l~~l---- 354 (457)
T 3bz5_A 282 AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL---DVSHNTKLKSLSCVNAHIQDF---- 354 (457)
T ss_dssp CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC---CCTTCTTCSEEECCSSCCCBC----
T ss_pred ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc---ccccCCcCcEEECCCCCCCCc----
Confidence 46779999999999988776654 256778999999999999984 388999999999999999862
Q ss_pred ccCCCCCCeeeecCCccccc
Q 010736 354 FGECPKLGALNISRNNITGD 373 (502)
Q Consensus 354 ~~~~~~L~~L~l~~N~l~~d 373 (502)
+.|..|+++.|.+.|.
T Consensus 355 ----~~L~~L~l~~n~l~g~ 370 (457)
T 3bz5_A 355 ----SSVGKIPALNNNFEAE 370 (457)
T ss_dssp ----TTGGGSSGGGTSEEEE
T ss_pred ----cccccccccCCcEEec
Confidence 3444555555555443
No 49
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.7e-31 Score=263.11 Aligned_cols=249 Identities=15% Similarity=0.142 Sum_probs=182.6
Q ss_pred CCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEccc
Q 010736 97 LAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFS 176 (502)
Q Consensus 97 L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 176 (502)
....++++|.++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|++++..|..|.++++|++|++++
T Consensus 33 ~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (353)
T 2z80_A 33 NGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSY 109 (353)
T ss_dssp TSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCC
Confidence 345788889888 5676554 5899999999999977666889999999999999999988788888899999999999
Q ss_pred CcccccCCcCCCCCCCCCeEEcccccccccCC-ccCcCCccCCccccccc-cccCcccccccCCCCCcEEEeeCcccccc
Q 010736 177 NNLNGSVPHSLGNLTQISMLFLHDNSFSGFIP-PDIGNLKSISILSLAIN-QFSGPIPLSLGNLTNLKQFSLVYNNLYGS 254 (502)
Q Consensus 177 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 254 (502)
|++++..+..+.++++|++|++++|++++..+ ..+..+++|++|++++| .++...+..+.++++|+.|++++|.+++.
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 189 (353)
T 2z80_A 110 NYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSY 189 (353)
T ss_dssp SCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred CcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCcc
Confidence 99886555557888888888888888885443 46777788888888877 35555556677777777777777766654
Q ss_pred CCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCccc---C
Q 010736 255 IPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAF---G 331 (502)
Q Consensus 255 ~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~---~ 331 (502)
.|. .+..+++|+.|++++|.++......+..+++|+.|++++|.+++..+..+ .
T Consensus 190 ~~~-----------------------~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~ 246 (353)
T 2z80_A 190 EPK-----------------------SLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGE 246 (353)
T ss_dssp CTT-----------------------TTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------
T ss_pred CHH-----------------------HHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccccc
Confidence 444 44445556666666666543322233446667777777777665443332 2
Q ss_pred CCCCCcEEEccCccccc----ccCccccCCCCCCeeeecCCccc
Q 010736 332 IYPNLTFIDLSRNNFYG----EISSNFGECPKLGALNISRNNIT 371 (502)
Q Consensus 332 ~l~~L~~L~Ls~N~l~~----~~~~~~~~~~~L~~L~l~~N~l~ 371 (502)
..+.++.++++++.+.+ .+|..+..+++|++|++++|++.
T Consensus 247 ~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~ 290 (353)
T 2z80_A 247 TNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK 290 (353)
T ss_dssp CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC
T ss_pred ccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC
Confidence 45678899999988876 36777889999999999999987
No 50
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=6.7e-30 Score=263.70 Aligned_cols=279 Identities=27% Similarity=0.365 Sum_probs=203.0
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEE
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILY 149 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 149 (502)
.+++.|++.++++.. ++. +..+++|++|+|++|.+++..| +.++++|++|++++|.+++..| ++++++|++|+
T Consensus 46 ~~l~~L~l~~~~i~~-l~~--~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-IDG--VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HTCCEEECCSSCCCC-CTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred ccccEEecCCCCCcc-Ccc--hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 468899999998874 553 8889999999999999997654 9999999999999999996655 99999999999
Q ss_pred ccCCcCcccCCcccCCCCCCcEEEcccCcccccCCc--------------------CCCCCCCCCeEEcccccccccCCc
Q 010736 150 IDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPH--------------------SLGNLTQISMLFLHDNSFSGFIPP 209 (502)
Q Consensus 150 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--------------------~~~~l~~L~~L~L~~N~l~~~~p~ 209 (502)
+++|++++..+ +..+++|++|++++|.+++. +. .+.++++|++|++++|.+++. .
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~ 193 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISDI-SALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--S 193 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-GGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--G
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCCC-hhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--h
Confidence 99999996543 89999999999999998853 22 134555666666666666543 2
Q ss_pred cCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCC
Q 010736 210 DIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGAL 288 (502)
Q Consensus 210 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L 288 (502)
.+..+++|++|++++|.+++..| ++.+++|+.|++++|.+++ ++ .+.. ..|+.|++++|.+++..+ +..+++|
T Consensus 194 ~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L 267 (466)
T 1o6v_A 194 VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAP--LSGLTKL 267 (466)
T ss_dssp GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCCCGG--GTTCTTC
T ss_pred hhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-ch-hhhcCCCCCEEECCCCccccchh--hhcCCCC
Confidence 35666677777777777665544 5566777777777777663 22 2222 567777888877776543 6677777
Q ss_pred cEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCC
Q 010736 289 QIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRN 368 (502)
Q Consensus 289 ~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N 368 (502)
+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++.+..+ +..+++|++|++++|
T Consensus 268 ~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n 341 (466)
T 1o6v_A 268 TELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNN 341 (466)
T ss_dssp SEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSS
T ss_pred CEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCC
Confidence 777777777775433 6667777777777777765443 5666777777777777765544 556666666666666
Q ss_pred cccc
Q 010736 369 NITG 372 (502)
Q Consensus 369 ~l~~ 372 (502)
++.+
T Consensus 342 ~l~~ 345 (466)
T 1o6v_A 342 KVSD 345 (466)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 6544
No 51
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.7e-30 Score=253.13 Aligned_cols=258 Identities=17% Similarity=0.214 Sum_probs=205.0
Q ss_pred CEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCccc--CCcccCCCCCCcEEEcc
Q 010736 98 AYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGS--IPLEVGQLSSMVELALF 175 (502)
Q Consensus 98 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~ 175 (502)
+.++.+++.++ .+|..+. ++|++|+|++|+++...+..|.++++|++|++++|+++.. .|..+..+++|++|+++
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 57888888887 5666543 6899999999999855445578899999999999988733 35667778888888888
Q ss_pred cCcccccCCcCCCCCCCCCeEEcccccccccCC-ccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCcccccc
Q 010736 176 SNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIP-PDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGS 254 (502)
Q Consensus 176 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 254 (502)
+|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..+..+..+++|+.|++++|.+++.
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 88887 456667788888888888888876554 4677777777777777777766666677777777777776666531
Q ss_pred CCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCC
Q 010736 255 IPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYP 334 (502)
Q Consensus 255 ~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 334 (502)
..|..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++..+..+..++
T Consensus 166 ----------------------~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 223 (306)
T 2z66_A 166 ----------------------FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN 223 (306)
T ss_dssp ----------------------EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCT
T ss_pred ----------------------cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcc
Confidence 2445566677888888888888877788888889999999999999887777888899
Q ss_pred CCcEEEccCcccccccCccccCCC-CCCeeeecCCccccccCcccccC
Q 010736 335 NLTFIDLSRNNFYGEISSNFGECP-KLGALNISRNNITGDFGIAKFLK 381 (502)
Q Consensus 335 ~L~~L~Ls~N~l~~~~~~~~~~~~-~L~~L~l~~N~l~~dfGl~~ll~ 381 (502)
+|++|++++|++.+..+..+..++ +|++|++++|++.||+.+.++..
T Consensus 224 ~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~ 271 (306)
T 2z66_A 224 SLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQ 271 (306)
T ss_dssp TCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHH
T ss_pred cCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHH
Confidence 999999999999999998898885 99999999999999999876654
No 52
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=2.8e-29 Score=258.03 Aligned_cols=236 Identities=18% Similarity=0.220 Sum_probs=191.8
Q ss_pred cceeeeCCC----------CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCc
Q 010736 61 WSGISCNDA----------GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQ 130 (502)
Q Consensus 61 W~Gv~C~~~----------~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~ 130 (502)
|..|.|... ..++.|+|++|++++..+. .|.++++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQAD-TFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTT-TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHH-HcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 678889742 3689999999999976655 49999999999999999999999999999999999999999
Q ss_pred CcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccC-cccccCCcCCCCCCCCCeEEcccccccccCCc
Q 010736 131 FSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSN-NLNGSVPHSLGNLTQISMLFLHDNSFSGFIPP 209 (502)
Q Consensus 131 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 209 (502)
+++..+..|..+++|++|+|++|+++...+..|..+++|+.|++++| .+....+..|..+++|++|++++|++++. |
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~- 212 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P- 212 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-
Confidence 99777778999999999999999999877778999999999999995 45544445689999999999999999865 3
Q ss_pred cCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCC
Q 010736 210 DIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGAL 288 (502)
Q Consensus 210 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L 288 (502)
.+..+++|+.|++++|++++..|..|.++++|+.|++++|++++..+..+.. ..|+.|++++|++++..+..+..+++|
T Consensus 213 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 292 (452)
T 3zyi_A 213 NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYL 292 (452)
T ss_dssp CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTC
T ss_pred cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCC
Confidence 5778888999999999888888888888888888888888887666655544 456666666666665554555555555
Q ss_pred cEEEccCCccc
Q 010736 289 QIFTVSENRFQ 299 (502)
Q Consensus 289 ~~L~ls~n~l~ 299 (502)
+.|++++|.+.
T Consensus 293 ~~L~L~~Np~~ 303 (452)
T 3zyi_A 293 VELHLHHNPWN 303 (452)
T ss_dssp CEEECCSSCEE
T ss_pred CEEEccCCCcC
Confidence 55555555543
No 53
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=8.7e-30 Score=250.34 Aligned_cols=235 Identities=19% Similarity=0.263 Sum_probs=206.0
Q ss_pred CCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEE
Q 010736 93 SFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVEL 172 (502)
Q Consensus 93 ~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 172 (502)
..+++++|+|++|+++ .+|..++++++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..++.+++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3478899999999988 77888888999999999999998 88888888999999999999988 778888888889999
Q ss_pred EcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCcccc
Q 010736 173 ALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLY 252 (502)
Q Consensus 173 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 252 (502)
++++|++.+.+|..+... ..+..+.++++|++|++++|+++ .+|..++++++|+.|++++|.++
T Consensus 156 ~L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 156 SIRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp EEEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC
T ss_pred ECCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC
Confidence 998888888888765431 12234667889999999999998 78888999999999999999999
Q ss_pred ccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccC
Q 010736 253 GSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFG 331 (502)
Q Consensus 253 ~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 331 (502)
+ +|..+.. ..|++|++++|++.+.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|++.+.+|..+.
T Consensus 220 ~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~ 298 (328)
T 4fcg_A 220 A-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA 298 (328)
T ss_dssp C-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGG
T ss_pred c-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHh
Confidence 5 5555655 7899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEccCcccc
Q 010736 332 IYPNLTFIDLSRNNFY 347 (502)
Q Consensus 332 ~l~~L~~L~Ls~N~l~ 347 (502)
.+++|+.+++..|.+.
T Consensus 299 ~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 299 QLPANCIILVPPHLQA 314 (328)
T ss_dssp GSCTTCEEECCGGGSC
T ss_pred hccCceEEeCCHHHHH
Confidence 9999999999987665
No 54
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.9e-29 Score=241.81 Aligned_cols=223 Identities=20% Similarity=0.203 Sum_probs=176.9
Q ss_pred EEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccC
Q 010736 73 INISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDS 152 (502)
Q Consensus 73 ~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 152 (502)
+.++.++++++ .+|. .-.++|++|++++|.+++..+..|.++++|++|+|++|.+++..|..|+.+++|++|++++
T Consensus 14 ~~~~c~~~~l~-~ip~---~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPV---GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCT---TCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCc---CCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 55677777776 3443 2357899999999999988888899999999999999999988888999999999999999
Q ss_pred Cc-CcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcc
Q 010736 153 NQ-LDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPI 231 (502)
Q Consensus 153 N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 231 (502)
|+ ++...|..|..+++|++|++++|++++..|..+..+++|++|++++|++++..+..+..+++|++|++++|++++..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 97 77666888999999999999999999888888889999999999999998777777888888888999888888666
Q ss_pred cccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCCcEEEccCCccc
Q 010736 232 PLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQ 299 (502)
Q Consensus 232 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~ 299 (502)
+..+..+++|+.|++++|.+++..|..+.. ..|+.|++++|++++..+..+..+++|+.|++++|.+.
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 666888888888888888877666655544 45666666666665544444555555566666555554
No 55
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.4e-28 Score=252.01 Aligned_cols=237 Identities=19% Similarity=0.223 Sum_probs=189.5
Q ss_pred ccceeeeCCC----------CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCC
Q 010736 60 AWSGISCNDA----------GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGN 129 (502)
Q Consensus 60 ~W~Gv~C~~~----------~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N 129 (502)
.|..|.|... ..++.|+|++|++++..+. .|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVN-SFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTT-TTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHH-HhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 3678888642 3578999999999976555 5999999999999999999988899999999999999999
Q ss_pred cCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCc-ccccCCcCCCCCCCCCeEEcccccccccCC
Q 010736 130 QFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNN-LNGSVPHSLGNLTQISMLFLHDNSFSGFIP 208 (502)
Q Consensus 130 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 208 (502)
++++..+..|..+++|++|+|++|+++...+..|..+++|++|++++|+ +....+..|.++++|++|++++|+++.. |
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~ 201 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-P 201 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-C
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-c
Confidence 9997777789999999999999999998888889999999999999954 5544445789999999999999999843 4
Q ss_pred ccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCC
Q 010736 209 PDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGA 287 (502)
Q Consensus 209 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~ 287 (502)
.+..+++|+.|++++|++++..|..|.++++|+.|++++|++++..+..+.. .+|+.|++++|++++..+..+..+++
T Consensus 202 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 280 (440)
T 3zyj_A 202 -NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 280 (440)
T ss_dssp -CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTT
T ss_pred -ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccC
Confidence 4777888888888888888777888888888888888888777665555544 45666666666665555555555555
Q ss_pred CcEEEccCCccc
Q 010736 288 LQIFTVSENRFQ 299 (502)
Q Consensus 288 L~~L~ls~n~l~ 299 (502)
|+.|++++|.+.
T Consensus 281 L~~L~L~~Np~~ 292 (440)
T 3zyj_A 281 LERIHLHHNPWN 292 (440)
T ss_dssp CCEEECCSSCEE
T ss_pred CCEEEcCCCCcc
Confidence 555555555543
No 56
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.96 E-value=6.3e-28 Score=247.39 Aligned_cols=263 Identities=24% Similarity=0.267 Sum_probs=140.2
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEE
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILY 149 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 149 (502)
.+++.|+++++.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++ +| .++++++|++|+
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~----~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~ 159 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL----PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIID 159 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC----CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCc-cccc----cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEE
Confidence 356666777666665 4432 2455555555555553 2211 1455555555555553 44 355555555555
Q ss_pred ccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccC
Q 010736 150 IDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSG 229 (502)
Q Consensus 150 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 229 (502)
+++|++++ +|..+ .+|++|++++|++++ +| .++.+++|++|++++|++++ +|... ++|++|++++|+++
T Consensus 160 l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~- 228 (454)
T 1jl5_A 160 VDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE- 228 (454)
T ss_dssp CCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-
T ss_pred CCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-
Confidence 55555553 33322 355555555555554 34 35555555555555555553 22211 34555555555554
Q ss_pred cccccccCCCCCcEEEeeCccccccCCCCCccccccEEECcCCcCcccCCccc-----------------cCCCCCcEEE
Q 010736 230 PIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNI-----------------CRGGALQIFT 292 (502)
Q Consensus 230 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~-----------------~~~~~L~~L~ 292 (502)
.+| .++.+++|+.|++++|++++ +|... ..|+.|++++|++++ +|... ...++|+.|+
T Consensus 229 ~lp-~~~~l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l~~N~l~~-l~~~~~~L~~L~ls~N~l~~l~~~~~~L~~L~ 303 (454)
T 1jl5_A 229 ELP-ELQNLPFLTTIYADNNLLKT-LPDLP--PSLEALNVRDNYLTD-LPELPQSLTFLDVSENIFSGLSELPPNLYYLN 303 (454)
T ss_dssp SCC-CCTTCTTCCEEECCSSCCSS-CCSCC--TTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSEESCCCTTCCEEE
T ss_pred ccc-ccCCCCCCCEEECCCCcCCc-ccccc--cccCEEECCCCcccc-cCcccCcCCEEECcCCccCcccCcCCcCCEEE
Confidence 334 24455555555555555542 22211 334444444444443 22111 0013444555
Q ss_pred ccCCccccccCcccccC-CCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCccc
Q 010736 293 VSENRFQGTIPKSLRNC-TSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNIT 371 (502)
Q Consensus 293 ls~n~l~~~~~~~l~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~ 371 (502)
+++|++++ + ..+ ++|+.|++++|++++ +|.. +++|++|++++|++++ +|. .+++|++|++++|++.
T Consensus 304 l~~N~l~~-i----~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~ 370 (454)
T 1jl5_A 304 ASSNEIRS-L----CDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLR 370 (454)
T ss_dssp CCSSCCSE-E----CCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS
T ss_pred CcCCcCCc-c----cCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCC
Confidence 55554443 1 122 478888888888875 4433 5788888888888874 454 4678888888888887
Q ss_pred c
Q 010736 372 G 372 (502)
Q Consensus 372 ~ 372 (502)
+
T Consensus 371 ~ 371 (454)
T 1jl5_A 371 E 371 (454)
T ss_dssp S
T ss_pred c
Confidence 6
No 57
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=5.2e-29 Score=240.00 Aligned_cols=224 Identities=20% Similarity=0.204 Sum_probs=175.6
Q ss_pred CEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccC
Q 010736 98 AYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSN 177 (502)
Q Consensus 98 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 177 (502)
++++.+++.++ .+|..+ .++|++|+|++|.+++..+..|..+++|++|++++|++++..|..|..+++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 67899999988 556544 479999999999999887788999999999999999999888889999999999999999
Q ss_pred c-ccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccCC
Q 010736 178 N-LNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIP 256 (502)
Q Consensus 178 ~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 256 (502)
. +....|..+..+++|++|++++|.+++..|..+..+++|++|++++|++++..+..+..+++|+.|++++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 7 776668889999999999999999998888888889999999999999987777778888888888888888875544
Q ss_pred CCCcc-ccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCcccc
Q 010736 257 PSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTG 324 (502)
Q Consensus 257 ~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~ 324 (502)
..+.. ..|+.|++++|++++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|.+..
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 44443 456666666666666556666666666666666666665444445556666666666665543
No 58
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=1.6e-28 Score=259.78 Aligned_cols=272 Identities=25% Similarity=0.333 Sum_probs=226.1
Q ss_pred CCCCccceee--------eCCCCCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEcc
Q 010736 56 ISPCAWSGIS--------CNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLG 127 (502)
Q Consensus 56 ~~~C~W~Gv~--------C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls 127 (502)
.++|.|.|.. |.. ..++.|++++++++ .+|.. +. ++|++|+|++|+|+ .+|. .+++|++|+|+
T Consensus 19 ~~~~~~~~r~~~~~~~~~c~~-~~l~~L~ls~n~L~-~lp~~-l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls 89 (622)
T 3g06_A 19 APAEESRGRAAVVQKMRACLN-NGNAVLNVGESGLT-TLPDC-LP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVS 89 (622)
T ss_dssp CCGGGHHHHHHHHHHHHHHHH-HCCCEEECCSSCCS-CCCSC-CC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcchhccccccCcccccccC-CCCcEEEecCCCcC-ccChh-hC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcC
Confidence 5688997643 322 35889999999998 77764 44 89999999999999 4665 57999999999
Q ss_pred CCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccC
Q 010736 128 GNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFI 207 (502)
Q Consensus 128 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 207 (502)
+|+|+ .+|. .+++|++|++++|++++ +|. .+++|+.|++++|++++ +|.. +++|++|++++|++++.
T Consensus 90 ~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l- 156 (622)
T 3g06_A 90 GNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL- 156 (622)
T ss_dssp SCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-
T ss_pred CCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc-
Confidence 99999 5665 67999999999999995 444 67899999999999985 6654 48999999999999864
Q ss_pred CccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCccccccEEECcCCcCcccCCccccCCCC
Q 010736 208 PPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGA 287 (502)
Q Consensus 208 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~ 287 (502)
|. .+++|+.|++++|++++ +| ..+++|+.|++++|.+++ +|..+ ..|+.|++++|.++.. |.. .++
T Consensus 157 ~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~~--~~L~~L~L~~N~l~~l-~~~---~~~ 222 (622)
T 3g06_A 157 PA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTLP--SELYKLWAYNNRLTSL-PAL---PSG 222 (622)
T ss_dssp CC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCCC--TTCCEEECCSSCCSSC-CCC---CTT
T ss_pred CC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCcc--chhhEEECcCCccccc-CCC---CCC
Confidence 43 34689999999999996 55 457899999999999985 55433 6899999999999864 432 478
Q ss_pred CcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecC
Q 010736 288 LQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISR 367 (502)
Q Consensus 288 L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~ 367 (502)
|+.|++++|++++ +| ..+++|+.|++++|+++. +|. .+++|+.|+|++|+|+ .+|..+..+++|+.|++++
T Consensus 223 L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~ 293 (622)
T 3g06_A 223 LKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 293 (622)
T ss_dssp CCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCS
T ss_pred CCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecC
Confidence 9999999999996 55 456899999999999985 444 6789999999999999 7788899999999999999
Q ss_pred Ccccc
Q 010736 368 NNITG 372 (502)
Q Consensus 368 N~l~~ 372 (502)
|++.+
T Consensus 294 N~l~~ 298 (622)
T 3g06_A 294 NPLSE 298 (622)
T ss_dssp CCCCH
T ss_pred CCCCC
Confidence 99875
No 59
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.96 E-value=1.5e-28 Score=252.08 Aligned_cols=249 Identities=22% Similarity=0.248 Sum_probs=145.6
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCC-------------CEEEccCCcCcCC--
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNL-------------SILSLGGNQFSGN-- 134 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L-------------~~L~Ls~N~l~~~-- 134 (502)
.+++.++++++++ |.+|.. ++++++|++|++++|.++|.+|..++++++| ++|++++|.+++.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~-i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVE-AENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPE 88 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCS
T ss_pred ccchhhhcccCch-hhCChh-HhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCC
Confidence 3567777777777 677765 7777777777777777777777777665543 5555555555531
Q ss_pred -----------------CCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEE
Q 010736 135 -----------------IPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLF 197 (502)
Q Consensus 135 -----------------~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 197 (502)
+|.. +++|++|++++|++++ +|.. .++|++|++++|++++ +| .++++++|++|+
T Consensus 89 ~~~~L~~L~l~~n~l~~lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~ 159 (454)
T 1jl5_A 89 LPPHLESLVASCNSLTELPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIID 159 (454)
T ss_dssp CCTTCSEEECCSSCCSSCCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CcCCCCEEEccCCcCCccccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEE
Confidence 3321 2344555555555442 1111 1567777777777775 56 477777888888
Q ss_pred cccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCccccccEEECcCCcCccc
Q 010736 198 LHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFTSY 277 (502)
Q Consensus 198 L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~ 277 (502)
+++|++++ +|..+ .+|++|++++|++++ +| .++++++|+.|++++|++++ +|... ..|++|++++|+++.
T Consensus 160 l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l~~n~l~~- 229 (454)
T 1jl5_A 160 VDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP--LSLESIVAGNNILEE- 229 (454)
T ss_dssp CCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC--TTCCEEECCSSCCSS-
T ss_pred CCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc--CcccEEECcCCcCCc-
Confidence 88887775 44432 467777888887776 45 57778888888888888774 44332 467888888888774
Q ss_pred CCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCccccc
Q 010736 278 LPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYG 348 (502)
Q Consensus 278 ~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 348 (502)
+| .+..+++|+.|++++|++++ +|.. .++|+.|++++|++++ +|.. .++|++|++++|++++
T Consensus 230 lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 230 LP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG 291 (454)
T ss_dssp CC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE
T ss_pred cc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc
Confidence 55 37778888888888888774 3432 3567777777777765 3322 2566677777776665
No 60
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.96 E-value=6.3e-28 Score=230.54 Aligned_cols=215 Identities=24% Similarity=0.258 Sum_probs=170.0
Q ss_pred CCCCccceeeeCCCCCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCC
Q 010736 56 ISPCAWSGISCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNI 135 (502)
Q Consensus 56 ~~~C~W~Gv~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~ 135 (502)
.+.|.|.|+.|...+.++.+++++++++. +|.. +. +++++|+|++|++++..+..|.++++|++|+|++|.++...
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~~-ip~~-~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLTA-IPSN-IP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCSS-CCSC-CC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCCc-cCCC-CC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 46899999999765667789999999884 6553 33 67999999999999877778999999999999999998666
Q ss_pred CcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCc
Q 010736 136 PHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLK 215 (502)
Q Consensus 136 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 215 (502)
+..|..+++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++|.+++..+..|..++
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 66678899999999999999877777788899999999999999887777788889999999999988877666788888
Q ss_pred cCCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcC
Q 010736 216 SISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHF 274 (502)
Q Consensus 216 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l 274 (502)
+|+.|++++|++++..+..|..+++|+.|++++|++++..+..+.. ..|+.|++++|.+
T Consensus 158 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (270)
T 2o6q_A 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPW 217 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred ccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCe
Confidence 8888888888888766667777888888888877776433333322 3344444444443
No 61
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=8.9e-31 Score=255.78 Aligned_cols=250 Identities=20% Similarity=0.199 Sum_probs=122.9
Q ss_pred CCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcC-cCCCCcccC-------CCCCCcEEEccCCcCcccCCccc
Q 010736 92 SSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQF-SGNIPHEVG-------LMSHLKILYIDSNQLDGSIPLEV 163 (502)
Q Consensus 92 ~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l-~~~~p~~l~-------~l~~L~~L~Ls~N~l~~~~p~~~ 163 (502)
+..++|++|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|++++|++++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3344555566666665 455544433 55566666665 334444443 45556666666666655555554
Q ss_pred --CCCCCCcEEEcccCcccccCCcCCCCC-----CCCCeEEcccccccccCCccCcCCccCCccccccccccCc--cccc
Q 010736 164 --GQLSSMVELALFSNNLNGSVPHSLGNL-----TQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGP--IPLS 234 (502)
Q Consensus 164 --~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~--~p~~ 234 (502)
..+++|++|++++|++++. |..++.+ ++|++|++++|++++..|..++.+++|++|++++|++.+. .|..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 5555666666666665544 4444444 5555666666655555555555555555555555555443 1222
Q ss_pred c--cCCCCCcEEEeeCccccccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccC-cccccCCC
Q 010736 235 L--GNLTNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIP-KSLRNCTS 311 (502)
Q Consensus 235 ~--~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~-~~l~~l~~ 311 (502)
+ ..+++|++|++++|++++. + ......+..+++|+.|++++|++++..| ..+..+++
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~-~-------------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 254 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETP-S-------------------GVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQ 254 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCH-H-------------------HHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTT
T ss_pred HHhccCCCCCEEECCCCcCcch-H-------------------HHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCC
Confidence 2 4555555555555555411 0 0000112233444444444444443332 22333444
Q ss_pred CcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCccc
Q 010736 312 LIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNIT 371 (502)
Q Consensus 312 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~ 371 (502)
|++|++++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|++|++++|++.
T Consensus 255 L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 255 LNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred CCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 555555555544 3333333 4455555555555443 22 444555555555555543
No 62
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=2.1e-30 Score=253.67 Aligned_cols=260 Identities=20% Similarity=0.237 Sum_probs=165.4
Q ss_pred EEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEcc
Q 010736 72 VINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYID 151 (502)
Q Consensus 72 v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 151 (502)
....+++.+.+...+.. .+..+++|++|+|++|++++..|..|.++++|++|+|++|.+++..| +..+++|++|+++
T Consensus 12 l~i~~ls~~~l~~~~~~-~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 12 YKIEKVTDSSLKQALAS-LRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEESCCTTTHHHHHHH-HHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred eeEeeccccchhhhHHH-HhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 34444555555433322 25555667777777777776666667777777777777777765443 6666777777777
Q ss_pred CCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcc
Q 010736 152 SNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPI 231 (502)
Q Consensus 152 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 231 (502)
+|++++.. ..++|++|++++|++++..+.. +++|++|++++|++++..+..+..+++|++|++++|++++..
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 77666422 2256666666666666544332 455666666666666655555666666666666666666544
Q ss_pred ccccc-CCCCCcEEEeeCccccccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCC
Q 010736 232 PLSLG-NLTNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCT 310 (502)
Q Consensus 232 p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~ 310 (502)
+..+. .+++|+.|++++|.++ +. .....+++|+.|++++|++++. |..+..++
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~-----------------------~~--~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~ 214 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIY-----------------------DV--KGQVVFAKLKTLDLSSNKLAFM-GPEFQSAA 214 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCC-----------------------EE--ECCCCCTTCCEEECCSSCCCEE-CGGGGGGT
T ss_pred HHHHhhccCcCCEEECCCCcCc-----------------------cc--ccccccccCCEEECCCCcCCcc-hhhhcccC
Confidence 44442 4555555555555554 32 1122356777788888877743 44577788
Q ss_pred CCcEEeCCCCccccccCcccCCCCCCcEEEccCcccc-cccCccccCCCCCCeeeecCCc
Q 010736 311 SLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFY-GEISSNFGECPKLGALNISRNN 369 (502)
Q Consensus 311 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~~~~L~~L~l~~N~ 369 (502)
+|+.|++++|++++ +|..+..+++|+.|++++|.+. +.++..+..++.|+.+++++++
T Consensus 215 ~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~ 273 (317)
T 3o53_A 215 GVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVK 273 (317)
T ss_dssp TCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred cccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCch
Confidence 88888888888874 5667778888888888888887 6677777778888888887443
No 63
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=2.1e-30 Score=253.16 Aligned_cols=244 Identities=18% Similarity=0.194 Sum_probs=182.9
Q ss_pred CEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcc-cccCCccCc-------CCCCCCEEEccCCcCcCCCCccc--C
Q 010736 71 RVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKL-FGTIPPQIS-------NLTNLSILSLGGNQFSGNIPHEV--G 140 (502)
Q Consensus 71 ~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l-~g~~p~~l~-------~l~~L~~L~Ls~N~l~~~~p~~l--~ 140 (502)
+++.++++++.+ .+|.. +... |++|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+ +
T Consensus 44 ~L~~l~l~~n~l--~~p~~-~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 118 (312)
T 1wwl_A 44 SLEYLLKRVDTE--ADLGQ-FTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEA 118 (312)
T ss_dssp ECTTHHHHCCTT--CCCHH-HHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSC
T ss_pred CceeEeeccccc--ccHHH-HHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHh
Confidence 466677888888 66654 4433 89999999999 467787776 89999999999999999999987 8
Q ss_pred CCCCCcEEEccCCcCcccCCcccCCC-----CCCcEEEcccCcccccCCcCCCCCCCCCeEEccccccccc--CCccC--
Q 010736 141 LMSHLKILYIDSNQLDGSIPLEVGQL-----SSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGF--IPPDI-- 211 (502)
Q Consensus 141 ~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~-- 211 (502)
.+++|++|+|++|++++. |..++.+ ++|++|++++|++++..|..|+.+++|++|++++|++.+. .+..+
T Consensus 119 ~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 197 (312)
T 1wwl_A 119 TGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCP 197 (312)
T ss_dssp CSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCT
T ss_pred cCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHh
Confidence 999999999999999987 8777776 9999999999999998889999999999999999998765 23344
Q ss_pred cCCccCCccccccccccCc--cc-ccccCCCCCcEEEeeCccccccCCCCCccccccEEECcCCcCcccCCccccCCCCC
Q 010736 212 GNLKSISILSLAINQFSGP--IP-LSLGNLTNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGAL 288 (502)
Q Consensus 212 ~~l~~L~~L~ls~N~l~~~--~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L 288 (502)
..+++|++|++++|++++. ++ ..+..+++|+.|++++|++++..|... +..+++|
T Consensus 198 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~----------------------~~~l~~L 255 (312)
T 1wwl_A 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPS----------------------CDWPSQL 255 (312)
T ss_dssp TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSC----------------------CCCCTTC
T ss_pred ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhh----------------------hhhcCCC
Confidence 8899999999999999842 22 344677889999999998886654221 1123344
Q ss_pred cEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccc
Q 010736 289 QIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFY 347 (502)
Q Consensus 289 ~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 347 (502)
+.|++++|+++ .+|..+. ++|++|++++|++++. |. +..+++|++|++++|+++
T Consensus 256 ~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 256 NSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred CEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 55555555554 3444333 4555666666666544 33 555566666666666554
No 64
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1e-29 Score=248.78 Aligned_cols=242 Identities=18% Similarity=0.175 Sum_probs=188.7
Q ss_pred CCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcc
Q 010736 96 HLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALF 175 (502)
Q Consensus 96 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 175 (502)
.++.++++.+.+...++..+..+++|++|+|++|++++..|..|+.+++|++|+|++|++++..+ +..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 34566788888876666667778899999999999998777889999999999999999987654 8888899999999
Q ss_pred cCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccC
Q 010736 176 SNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSI 255 (502)
Q Consensus 176 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 255 (502)
+|++++.. ..++|++|++++|++++..+.. +++|+.|++++|++++..+..+..+++|+.|++++|.++
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~--- 157 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID--- 157 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCC---
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCC---
Confidence 99887533 2377888888888887654433 456777777777777666656666666666666655554
Q ss_pred CCCCccccccEEECcCCcCcccCCccc-cCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCC
Q 010736 256 PPSLDNLVLTKLSLDDNHFTSYLPQNI-CRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYP 334 (502)
Q Consensus 256 p~~~~~~~L~~L~ls~N~l~~~~~~~~-~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 334 (502)
+..+..+ ..+++|+.|++++|.+++. + ....+++|++|++++|++++. +..+..++
T Consensus 158 --------------------~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~ 214 (317)
T 3o53_A 158 --------------------TVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAA 214 (317)
T ss_dssp --------------------EEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGT
T ss_pred --------------------cccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcc-hhhhcccC
Confidence 3333444 3568899999999999865 3 234589999999999999965 45588999
Q ss_pred CCcEEEccCcccccccCccccCCCCCCeeeecCCcccccc
Q 010736 335 NLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGDF 374 (502)
Q Consensus 335 ~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~df 374 (502)
+|++|++++|+++ .+|..+..+++|++|++++|++.|+.
T Consensus 215 ~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~ 253 (317)
T 3o53_A 215 GVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGT 253 (317)
T ss_dssp TCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHH
T ss_pred cccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcC
Confidence 9999999999998 56778999999999999999999763
No 65
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.8e-28 Score=253.86 Aligned_cols=237 Identities=21% Similarity=0.263 Sum_probs=165.7
Q ss_pred CCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEE
Q 010736 93 SFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVEL 172 (502)
Q Consensus 93 ~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 172 (502)
.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..| ++.+++|++|+|++|.+++..+ .++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34477888888888877777777788888888888888776555 7777778888888777774332 2677777
Q ss_pred EcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCccccccc-CCCCCcEEEeeCccc
Q 010736 173 ALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLG-NLTNLKQFSLVYNNL 251 (502)
Q Consensus 173 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l 251 (502)
++++|.+++..+. .+++|+.|++++|.+++..|..++.+++|+.|++++|.+++.+|..+. .+++|+.|++++|.+
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 7777777765543 345677777777777766666666677777777777777666665554 566666666666665
Q ss_pred cccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccC
Q 010736 252 YGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFG 331 (502)
Q Consensus 252 ~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 331 (502)
++. | ....+++|+.|++++|.+++. |..+..+++|+.|++++|.+++ +|..+.
T Consensus 182 ~~~-~------------------------~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~ 234 (487)
T 3oja_A 182 YDV-K------------------------GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALR 234 (487)
T ss_dssp CEE-E------------------------CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCC
T ss_pred ccc-c------------------------ccccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhc
Confidence 532 1 122356777777777777754 3447778888888888888885 566677
Q ss_pred CCCCCcEEEccCcccc-cccCccccCCCCCCeeeec
Q 010736 332 IYPNLTFIDLSRNNFY-GEISSNFGECPKLGALNIS 366 (502)
Q Consensus 332 ~l~~L~~L~Ls~N~l~-~~~~~~~~~~~~L~~L~l~ 366 (502)
.+++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 235 ~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 235 FSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 7888888888888887 5666667777777777775
No 66
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=1.3e-26 Score=222.20 Aligned_cols=206 Identities=22% Similarity=0.226 Sum_probs=167.6
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEc
Q 010736 95 PHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELAL 174 (502)
Q Consensus 95 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 174 (502)
++|++|++++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|++++|++++..+..|..+++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 57999999999999888888999999999999999999877788999999999999999999888888999999999999
Q ss_pred ccCcccccCCcCCCCCCCCCeEEccccccccc-CCccCcCCccCCccccccccccCcccccccCCCCCc----EEEeeCc
Q 010736 175 FSNNLNGSVPHSLGNLTQISMLFLHDNSFSGF-IPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLK----QFSLVYN 249 (502)
Q Consensus 175 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~----~L~l~~N 249 (502)
++|++++..+..+..+++|++|++++|.+++. +|..+..+++|++|++++|++++..+..+..+++|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 99999987777789999999999999999874 588888899999999999999877777777666666 7778888
Q ss_pred cccccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCcccc
Q 010736 250 NLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQG 300 (502)
Q Consensus 250 ~l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~ 300 (502)
.+++..+..+....|+.|++++|++++..+..+..+++|+.|++++|.+++
T Consensus 188 ~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 188 PMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred cccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 777655555544566666666666666544445556666666666666553
No 67
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.8e-28 Score=253.89 Aligned_cols=228 Identities=19% Similarity=0.213 Sum_probs=174.7
Q ss_pred CEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEc
Q 010736 71 RVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYI 150 (502)
Q Consensus 71 ~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 150 (502)
+++.|+|++|++++..|. .|+.+++|++|+|++|.+++..| |+.+++|++|+|++|.|++..+ .++|++|++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAA-DLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GCCEEECCSSCCCCCCGG-GGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CccEEEeeCCcCCCCCHH-HHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 799999999999975544 59999999999999999998776 9999999999999999985432 389999999
Q ss_pred cCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCc-CCccCCccccccccccC
Q 010736 151 DSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIG-NLKSISILSLAINQFSG 229 (502)
Q Consensus 151 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~~ 229 (502)
++|.+++..+. .+++|+.|++++|.+++..|..++.+++|++|+|++|.+++..|..+. .+++|+.|++++|.+++
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 99999976664 457899999999999999999999999999999999999998888876 79999999999999997
Q ss_pred cccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCCcEEEccCCccc-cccCcccc
Q 010736 230 PIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQ-GTIPKSLR 307 (502)
Q Consensus 230 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~-~~~~~~l~ 307 (502)
..+ +..+++|+.|++++|.+++..|. +.. ..|+.|++++|.+++ +|..+..+++|+.|++++|.+. +.+|..+.
T Consensus 184 ~~~--~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~ 259 (487)
T 3oja_A 184 VKG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (487)
T ss_dssp EEC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHT
T ss_pred ccc--cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHH
Confidence 633 34578888888888888754333 322 445555555555554 3333444444444444444444 33333333
Q ss_pred cCCCCc
Q 010736 308 NCTSLI 313 (502)
Q Consensus 308 ~l~~L~ 313 (502)
.++.|+
T Consensus 260 ~l~~L~ 265 (487)
T 3oja_A 260 KNQRVQ 265 (487)
T ss_dssp TCHHHH
T ss_pred hCCCCc
Confidence 333333
No 68
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=2.4e-26 Score=220.29 Aligned_cols=227 Identities=18% Similarity=0.168 Sum_probs=145.8
Q ss_pred EEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCc
Q 010736 99 YLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNN 178 (502)
Q Consensus 99 ~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 178 (502)
.++.++.+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|++++|++++..+..|..+++|++|++++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 4555555555 4555443 467777777777776666667777777777777777776655666667777777777776
Q ss_pred ccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCc-ccccccCCCCCcEEEeeCccccccCCC
Q 010736 179 LNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGP-IPLSLGNLTNLKQFSLVYNNLYGSIPP 257 (502)
Q Consensus 179 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~ 257 (502)
+++..+..|.++++|++|++++|.+++..+..+..+++|++|++++|++++. +|..+..+
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l------------------- 148 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNL------------------- 148 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGC-------------------
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccC-------------------
Confidence 6666556666666666666666666554444455555555555555544432 23344444
Q ss_pred CCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCc----EEeCCCCccccccCcccCCC
Q 010736 258 SLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLI----RVRLDGNNLTGNISKAFGIY 333 (502)
Q Consensus 258 ~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~----~L~l~~N~l~~~~~~~~~~l 333 (502)
++|+.|++++|++++..+..+..+.+|+ .+++++|.+++..+..+. .
T Consensus 149 ----------------------------~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~ 199 (276)
T 2z62_A 149 ----------------------------TNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-E 199 (276)
T ss_dssp ----------------------------TTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-S
T ss_pred ----------------------------CCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-C
Confidence 4444444444444443333444444444 678888888766555444 3
Q ss_pred CCCcEEEccCcccccccCccccCCCCCCeeeecCCccccccCc
Q 010736 334 PNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGI 376 (502)
Q Consensus 334 ~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~dfGl 376 (502)
.+|+.|++++|++++..+..+..+++|++|++++|++.|||..
T Consensus 200 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 200 IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCc
Confidence 4889999999998877777778899999999999999999863
No 69
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.94 E-value=4.5e-30 Score=264.57 Aligned_cols=302 Identities=17% Similarity=0.176 Sum_probs=174.9
Q ss_pred CCEEEEEecCCCCceecCcccCCCCC----CCCEEECCCCcccc----cCCccCcCCCCCCEEEccCCcCcCCCCccc--
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFP----HLAYLDLRDNKLFG----TIPPQISNLTNLSILSLGGNQFSGNIPHEV-- 139 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~----~L~~L~Ls~N~l~g----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l-- 139 (502)
.+++.|+|+++.+.+..+..-+..++ +|++|+|++|.++. .+|..+.++++|++|+|++|.+++..+..+
T Consensus 56 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 135 (461)
T 1z7x_W 56 PALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE 135 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHH
T ss_pred CCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHH
Confidence 34666666666665432221122233 56666666666663 446666666666677776666654333222
Q ss_pred ---CCCCCCcEEEccCCcCcccC----CcccCCCCCCcEEEcccCcccccCCcCCC-----CCCCCCeEEccccccccc-
Q 010736 140 ---GLMSHLKILYIDSNQLDGSI----PLEVGQLSSMVELALFSNNLNGSVPHSLG-----NLTQISMLFLHDNSFSGF- 206 (502)
Q Consensus 140 ---~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~- 206 (502)
...++|++|++++|++++.. +..+..+++|++|++++|.++...+..+. ..++|++|++++|.+++.
T Consensus 136 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 215 (461)
T 1z7x_W 136 GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDN 215 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTH
T ss_pred HHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHH
Confidence 12445666667666666532 34445566677777776666543333222 244666777777766642
Q ss_pred ---CCccCcCCccCCccccccccccCcc-----cccccCCCCCcEEEeeCcccccc----CCCCCcc-ccccEEECcCCc
Q 010736 207 ---IPPDIGNLKSISILSLAINQFSGPI-----PLSLGNLTNLKQFSLVYNNLYGS----IPPSLDN-LVLTKLSLDDNH 273 (502)
Q Consensus 207 ---~p~~~~~l~~L~~L~ls~N~l~~~~-----p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~-~~L~~L~ls~N~ 273 (502)
++..+..+++|++|++++|+++... +..+..+++|+.|++++|.+++. ++..+.. ..|++|++++|.
T Consensus 216 ~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 295 (461)
T 1z7x_W 216 CRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNE 295 (461)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCC
T ss_pred HHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCC
Confidence 3445556666777777777665432 22223466677777777766543 2332222 457777777777
Q ss_pred CcccCCccccC-----CCCCcEEEccCCccccc----cCcccccCCCCcEEeCCCCccccccCcccC-----CCCCCcEE
Q 010736 274 FTSYLPQNICR-----GGALQIFTVSENRFQGT----IPKSLRNCTSLIRVRLDGNNLTGNISKAFG-----IYPNLTFI 339 (502)
Q Consensus 274 l~~~~~~~~~~-----~~~L~~L~ls~n~l~~~----~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~-----~l~~L~~L 339 (502)
+++..+..+.. .++|+.|++++|.+++. ++..+..+++|+.|++++|.+++..+..+. ..++|++|
T Consensus 296 i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L 375 (461)
T 1z7x_W 296 LGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVL 375 (461)
T ss_dssp CHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEE
T ss_pred CchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEE
Confidence 65443322222 24677777777777654 345556667777777777777654333332 15677777
Q ss_pred EccCccccc----ccCccccCCCCCCeeeecCCccc
Q 010736 340 DLSRNNFYG----EISSNFGECPKLGALNISRNNIT 371 (502)
Q Consensus 340 ~Ls~N~l~~----~~~~~~~~~~~L~~L~l~~N~l~ 371 (502)
++++|++++ .++..+..+++|++|++++|++.
T Consensus 376 ~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 376 WLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp ECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred ECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 777777765 55666666777777777777764
No 70
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.94 E-value=2.8e-26 Score=216.61 Aligned_cols=192 Identities=22% Similarity=0.226 Sum_probs=172.4
Q ss_pred CCCccceeeeCCCCCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCC
Q 010736 57 SPCAWSGISCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIP 136 (502)
Q Consensus 57 ~~C~W~Gv~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p 136 (502)
+||.|.|.+|.. ..+.+++++++++ .+|.. +. +++++|+|++|++++..+..|.++++|++|+|++|.+++..|
T Consensus 3 ~Cp~~~gC~C~~--~~~~l~~~~~~l~-~~p~~-~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNE--GKKEVDCQGKSLD-SVPSG-IP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEG--GGTEEECTTCCCS-SCCSC-CC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCC--CCeEEecCCCCcc-ccCCC-CC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 466899999963 2456899999988 55553 43 689999999999999999999999999999999999999888
Q ss_pred cccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCcc
Q 010736 137 HEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKS 216 (502)
Q Consensus 137 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 216 (502)
..|..+++|++|+|++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 156 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcC
Confidence 88999999999999999999888888999999999999999999877777899999999999999999888878999999
Q ss_pred CCccccccccccCcccccccCCCCCcEEEeeCcccccc
Q 010736 217 ISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGS 254 (502)
Q Consensus 217 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 254 (502)
|++|++++|++++..+..+..+++|+.|++++|.+.+.
T Consensus 157 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 157 LQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999999999988888899999999999999999865
No 71
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.93 E-value=2.6e-29 Score=258.86 Aligned_cols=300 Identities=18% Similarity=0.156 Sum_probs=151.9
Q ss_pred CEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccc----cCCccCcCCCCCCEEEccCCcCcCCCCccc-CCCC--
Q 010736 71 RVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFG----TIPPQISNLTNLSILSLGGNQFSGNIPHEV-GLMS-- 143 (502)
Q Consensus 71 ~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~-- 143 (502)
+++.|+|++++++.......+..+++|++|+|++|++++ .++..+..+++|++|+|++|.++...+..+ ..++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 355666666665433222224555666666666666553 234455556666666666666654322222 1233
Q ss_pred --CCcEEEccCCcCcc----cCCcccCCCCCCcEEEcccCcccccCCcCC-----CCCCCCCeEEcccccccccC----C
Q 010736 144 --HLKILYIDSNQLDG----SIPLEVGQLSSMVELALFSNNLNGSVPHSL-----GNLTQISMLFLHDNSFSGFI----P 208 (502)
Q Consensus 144 --~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~----p 208 (502)
+|++|++++|+++. .++..+..+++|++|++++|.+++..+..+ ...++|++|++++|++++.. +
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 46666666666652 345555666666666666666553322221 12345666666666655422 3
Q ss_pred ccCcCCccCCccccccccccCccccccc-----CCCCCcEEEeeCcccccc----CCCCCcc-ccccEEECcCCcCcccC
Q 010736 209 PDIGNLKSISILSLAINQFSGPIPLSLG-----NLTNLKQFSLVYNNLYGS----IPPSLDN-LVLTKLSLDDNHFTSYL 278 (502)
Q Consensus 209 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~-----~l~~L~~L~l~~N~l~~~----~p~~~~~-~~L~~L~ls~N~l~~~~ 278 (502)
..+..+++|++|++++|.++...+..+. ..++|+.|++++|.+++. ++..+.. ..|++|++++|.+++..
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 243 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 243 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHH
Confidence 3344455666666666665543322222 234566666666655532 1222222 45666666666555431
Q ss_pred -----CccccCCCCCcEEEccCCccccc----cCcccccCCCCcEEeCCCCccccccCcccC-----CCCCCcEEEccCc
Q 010736 279 -----PQNICRGGALQIFTVSENRFQGT----IPKSLRNCTSLIRVRLDGNNLTGNISKAFG-----IYPNLTFIDLSRN 344 (502)
Q Consensus 279 -----~~~~~~~~~L~~L~ls~n~l~~~----~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~-----~l~~L~~L~Ls~N 344 (502)
+..+...++|+.|++++|.+++. ++..+..+++|+.|++++|.+++..+..+. ..++|++|++++|
T Consensus 244 ~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 323 (461)
T 1z7x_W 244 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSC 323 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCC
Confidence 11122345566666666665542 344455556666666666655433222221 2245666666666
Q ss_pred ccccc----cCccccCCCCCCeeeecCCcc
Q 010736 345 NFYGE----ISSNFGECPKLGALNISRNNI 370 (502)
Q Consensus 345 ~l~~~----~~~~~~~~~~L~~L~l~~N~l 370 (502)
.+++. ++..+..+++|++|++++|.+
T Consensus 324 ~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i 353 (461)
T 1z7x_W 324 SFTAACCSHFSSVLAQNRFLLELQISNNRL 353 (461)
T ss_dssp CCBGGGHHHHHHHHHHCSSCCEEECCSSBC
T ss_pred CCchHHHHHHHHHHhhCCCccEEEccCCcc
Confidence 65543 233444455666666666654
No 72
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=3.2e-24 Score=204.79 Aligned_cols=203 Identities=20% Similarity=0.256 Sum_probs=150.6
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEc
Q 010736 95 PHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELAL 174 (502)
Q Consensus 95 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 174 (502)
.+.+.+++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|++++|+++...+..|..+++|++|++
T Consensus 16 ~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 16 NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 35788999999988 4676554 67899999999998777778888999999999999988666666788889999999
Q ss_pred ccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCcccccc
Q 010736 175 FSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGS 254 (502)
Q Consensus 175 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 254 (502)
++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|+.|++++|++++.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 99988877677778888888888888888877777778888888888888888866666677777777777777777644
Q ss_pred CCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccc
Q 010736 255 IPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLT 323 (502)
Q Consensus 255 ~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~ 323 (502)
.+. .+..+++|+.|++++|++++..+..+..+++|+.|++++|.+.
T Consensus 173 ~~~-----------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 173 PEG-----------------------AFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CTT-----------------------TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred Chh-----------------------HhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 333 3344455555555555555444444555566666666666554
No 73
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=5.9e-25 Score=210.10 Aligned_cols=206 Identities=23% Similarity=0.271 Sum_probs=101.9
Q ss_pred CEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEc
Q 010736 71 RVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYI 150 (502)
Q Consensus 71 ~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 150 (502)
.++.|+++++++.. ++ .+..+++|++|++++|.+++. +.+.++++|++|+|++|.+++..+..|+.+++|++|++
T Consensus 42 ~L~~L~l~~~~i~~-~~--~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 116 (272)
T 3rfs_A 42 SIDQIIANNSDIKS-VQ--GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116 (272)
T ss_dssp TCCEEECTTSCCCC-CT--TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ceeeeeeCCCCccc-cc--ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEEC
Confidence 34445555544431 11 144455555555555555431 24455555555555555555444444455555555555
Q ss_pred cCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCc
Q 010736 151 DSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGP 230 (502)
Q Consensus 151 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 230 (502)
++|++++..+..|..+++|++|++++|++++..+..+..+++|++|++++|++++..+..+..+++|+.|++++|++++.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (272)
T 3rfs_A 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSV 196 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCcc
Confidence 55555544444445555555555555555544444444555555555555555544444444445555555555555544
Q ss_pred ccccccCCCCCcEEEeeCccccccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCC
Q 010736 231 IPLSLGNLTNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCT 310 (502)
Q Consensus 231 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~ 310 (502)
.+..+..+++|+. |++++|.+.+. +++++.++++.|.++|.+|.+++.+.
T Consensus 197 ~~~~~~~l~~L~~-----------------------L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 197 PDGVFDRLTSLQY-----------------------IWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp CTTTTTTCTTCCE-----------------------EECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred CHHHHhCCcCCCE-----------------------EEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccC
Confidence 4444444444444 44544444332 23455566666666666666555444
Q ss_pred C
Q 010736 311 S 311 (502)
Q Consensus 311 ~ 311 (502)
.
T Consensus 247 ~ 247 (272)
T 3rfs_A 247 P 247 (272)
T ss_dssp G
T ss_pred C
Confidence 3
No 74
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.8e-24 Score=208.59 Aligned_cols=212 Identities=23% Similarity=0.217 Sum_probs=155.0
Q ss_pred cCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCC
Q 010736 139 VGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSIS 218 (502)
Q Consensus 139 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 218 (502)
++++++++++++++|+++ .+|..+. ++++.|++++|++++..|..|..+++|++|++++|.+++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 556677777777777776 4554443 4677777777777766666677777777777777776654322 4555566
Q ss_pred ccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCcc
Q 010736 219 ILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRF 298 (502)
Q Consensus 219 ~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l 298 (502)
+|++++|+++ .+|..+..+++|+. |++++|++++..+..|..+++|+.|++++|++
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~-----------------------L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l 136 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTV-----------------------LDVSFNRLTSLPLGALRGLGELQELYLKGNEL 136 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCE-----------------------EECCSSCCCCCCSSTTTTCTTCCEEECTTSCC
T ss_pred EEECCCCcCC-cCchhhccCCCCCE-----------------------EECCCCcCcccCHHHHcCCCCCCEEECCCCCC
Confidence 6666666555 34444444444544 45555555554556677778888888888888
Q ss_pred ccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCccccccCccc
Q 010736 299 QGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAK 378 (502)
Q Consensus 299 ~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~dfGl~~ 378 (502)
++..+..|..+++|+.|++++|++++..+..|..+++|++|+|++|+++ .+|..+...+.|+++++++|++.|||++.+
T Consensus 137 ~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~~~~ 215 (290)
T 1p9a_G 137 KTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCEILY 215 (290)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGGGHH
T ss_pred CccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCccHH
Confidence 8776777888899999999999999777777888999999999999998 677777788899999999999999999876
Q ss_pred cc
Q 010736 379 FL 380 (502)
Q Consensus 379 ll 380 (502)
+.
T Consensus 216 l~ 217 (290)
T 1p9a_G 216 FR 217 (290)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 75
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=3e-24 Score=207.04 Aligned_cols=156 Identities=22% Similarity=0.228 Sum_probs=90.0
Q ss_pred CCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCc
Q 010736 91 FSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMV 170 (502)
Q Consensus 91 ~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 170 (502)
+.++++++++++++|+++ .+|..+. +++++|+|++|.+++..|..|..+++|++|+|++|++++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 455556666666666665 3444332 4566666666666655555666666666666666666543221 4556666
Q ss_pred EEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCcc
Q 010736 171 ELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNN 250 (502)
Q Consensus 171 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 250 (502)
+|++++|+++ .+|..+..+++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|+.|++++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 6666666665 455555566666666666666665555555556666666666666555444445555555555555555
Q ss_pred cc
Q 010736 251 LY 252 (502)
Q Consensus 251 l~ 252 (502)
++
T Consensus 160 l~ 161 (290)
T 1p9a_G 160 LT 161 (290)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 76
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.92 E-value=4.6e-24 Score=225.58 Aligned_cols=247 Identities=25% Similarity=0.329 Sum_probs=207.4
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEE
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILY 149 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 149 (502)
..++.|+|++|+++ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|++|.+++ +|. .+++|+.|+
T Consensus 61 ~~L~~L~L~~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~ 127 (622)
T 3g06_A 61 AHITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLW 127 (622)
T ss_dssp TTCSEEEECSCCCS-CCCC----CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEE
T ss_pred CCCcEEEecCCCCC-CCCC----cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEE
Confidence 46899999999998 4654 57899999999999984 665 78999999999999995 554 578999999
Q ss_pred ccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccC
Q 010736 150 IDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSG 229 (502)
Q Consensus 150 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 229 (502)
+++|++++ +|.. +++|++|++++|++++ +|. .+.+|+.|++++|.+++ +| ..+++|+.|++++|++++
T Consensus 128 L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~ 195 (622)
T 3g06_A 128 IFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS 195 (622)
T ss_dssp CCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC
T ss_pred CCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC
Confidence 99999985 5653 4899999999999985 454 34789999999999996 45 456899999999999996
Q ss_pred cccccccCCCCCcEEEeeCccccccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccC
Q 010736 230 PIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNC 309 (502)
Q Consensus 230 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l 309 (502)
+|.. +++|+.|++++|.++ .+|..+ .+|+.|++++|++++ +| ..+++|+.|++++|+++ .+|. .+
T Consensus 196 -l~~~---~~~L~~L~L~~N~l~-~l~~~~--~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~ 260 (622)
T 3g06_A 196 -LPTL---PSELYKLWAYNNRLT-SLPALP--SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LP 260 (622)
T ss_dssp -CCCC---CTTCCEEECCSSCCS-SCCCCC--TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CC
T ss_pred -CCCc---cchhhEEECcCCccc-ccCCCC--CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---cc
Confidence 4443 478999999999998 555433 679999999999998 44 45589999999999998 4565 57
Q ss_pred CCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCC
Q 010736 310 TSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGEC 357 (502)
Q Consensus 310 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 357 (502)
++|+.|++++|+++ .+|..+..+++|+.|+|++|.+++..+..+..+
T Consensus 261 ~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 261 SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred ccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 89999999999999 678889999999999999999998887766544
No 77
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.2e-24 Score=207.95 Aligned_cols=211 Identities=21% Similarity=0.262 Sum_probs=144.7
Q ss_pred CCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCc
Q 010736 91 FSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMV 170 (502)
Q Consensus 91 ~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 170 (502)
+..+++|+.|++++|.++. + +.+..+++|++|+|++|.+++. ..++.+++|++|++++|++++..+..|..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 4456677777777777663 2 2466777777777777777642 3566777777777777777766666666777777
Q ss_pred EEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCcc
Q 010736 171 ELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNN 250 (502)
Q Consensus 171 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 250 (502)
+|++++|++++..+..+..+++|++|++++|++++..+..+..+++|+.|++++|++++..+..++.+++|+.|++++|+
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 77777777766655556666677777777776665555555666666666666666665555445555555555555554
Q ss_pred ccccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCccc
Q 010736 251 LYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAF 330 (502)
Q Consensus 251 l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~ 330 (502)
+++..+..+..+++|+.|++++|.+.+. +++|+.+++..|.++|.+|..+
T Consensus 193 -----------------------l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 193 -----------------------LKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp -----------------------CSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTT
T ss_pred -----------------------CCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcc
Confidence 4444555667788999999999998754 5578899999999999999888
Q ss_pred CCCCC
Q 010736 331 GIYPN 335 (502)
Q Consensus 331 ~~l~~ 335 (502)
+.++.
T Consensus 243 ~~~~~ 247 (272)
T 3rfs_A 243 GSVAP 247 (272)
T ss_dssp SCBCG
T ss_pred cccCC
Confidence 76554
No 78
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=4.1e-24 Score=208.31 Aligned_cols=227 Identities=16% Similarity=0.146 Sum_probs=156.9
Q ss_pred CCCCEEECCCCcccccCCc---cCcCCCCCCEEEccCCcCcCCCCccc--CCCCCCcEEEccCCcCcccCC----cccCC
Q 010736 95 PHLAYLDLRDNKLFGTIPP---QISNLTNLSILSLGGNQFSGNIPHEV--GLMSHLKILYIDSNQLDGSIP----LEVGQ 165 (502)
Q Consensus 95 ~~L~~L~Ls~N~l~g~~p~---~l~~l~~L~~L~Ls~N~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~~~p----~~~~~ 165 (502)
..++.+.+.++.++...-. .+..+++|++|++++|.+++..|..+ +.+++|++|+|++|++++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3578888888877532111 12235679999999999999999888 889999999999999987655 34567
Q ss_pred CCCCcEEEcccCcccccCCcCCCCCCCCCeEEccccccccc---C-CccCcCCccCCccccccccccCcccc----cccC
Q 010736 166 LSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGF---I-PPDIGNLKSISILSLAINQFSGPIPL----SLGN 237 (502)
Q Consensus 166 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~-p~~~~~l~~L~~L~ls~N~l~~~~p~----~~~~ 237 (502)
+++|++|++++|++++..|..++.+++|++|++++|++.+. . +..+..+++|++|++++|+++. ++. .++.
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhc
Confidence 89999999999999988888899999999999999987652 1 2334678899999999999873 222 2467
Q ss_pred CCCCcEEEeeCccccccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeC
Q 010736 238 LTNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRL 317 (502)
Q Consensus 238 l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l 317 (502)
+++|++|++++|++++..|..+... ...++|+.|++++|+++ .+|..+. ++|+.|++
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~--------------------~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~L 279 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRC--------------------MWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDL 279 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSC--------------------CCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEEC
T ss_pred CCCCCEEECCCCCCCccchhhHHhc--------------------cCcCcCCEEECCCCCCC-chhhhhc--CCCCEEEC
Confidence 7888888888888887666554331 01134444445555444 3333332 45555555
Q ss_pred CCCccccccCcccCCCCCCcEEEccCcccc
Q 010736 318 DGNNLTGNISKAFGIYPNLTFIDLSRNNFY 347 (502)
Q Consensus 318 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 347 (502)
++|++++. |. +..+++|+.|+|++|+++
T Consensus 280 s~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 280 SSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred CCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 55555543 11 445566666666666554
No 79
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=3.6e-24 Score=208.72 Aligned_cols=225 Identities=21% Similarity=0.218 Sum_probs=169.7
Q ss_pred CEEEEEecCCCCceecCc--ccCCCCCCCCEEECCCCcccccCCccC--cCCCCCCEEEccCCcCcCCCC----cccCCC
Q 010736 71 RVINISLRGVGLKGKLHA--FSFSSFPHLAYLDLRDNKLFGTIPPQI--SNLTNLSILSLGGNQFSGNIP----HEVGLM 142 (502)
Q Consensus 71 ~v~~L~L~~~~l~g~l~~--~~~~~l~~L~~L~Ls~N~l~g~~p~~l--~~l~~L~~L~Ls~N~l~~~~p----~~l~~l 142 (502)
++..+.+.+..+...--. ..+..+++|++|++++|.+++..|..+ .++++|++|+|++|.+++..| ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 456666666665421100 012234679999999999999999998 999999999999999998766 345679
Q ss_pred CCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCccccc--C--CcCCCCCCCCCeEEcccccccccC--Cc-cCcCCc
Q 010736 143 SHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGS--V--PHSLGNLTQISMLFLHDNSFSGFI--PP-DIGNLK 215 (502)
Q Consensus 143 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~--p~-~~~~l~ 215 (502)
++|++|+|++|++++..|..|..+++|++|++++|++.+. + +..+..+++|++|++++|+++... +. .+..++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~ 224 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGV 224 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTC
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCC
Confidence 9999999999999988889999999999999999998752 2 233478999999999999997431 11 256789
Q ss_pred cCCccccccccccCcccccccCC---CCCcEEEeeCccccccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEE
Q 010736 216 SISILSLAINQFSGPIPLSLGNL---TNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFT 292 (502)
Q Consensus 216 ~L~~L~ls~N~l~~~~p~~~~~l---~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ 292 (502)
+|++|++++|++++..|..+..+ ++|++|++++|+++ .+|..+. ..|+.|++++|++++. |. +..+++|+.|+
T Consensus 225 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~-~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~ 300 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP-AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLT 300 (310)
T ss_dssp CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC-SCCSCEECCSCCCCSC-CC-TTSCCCCSCEE
T ss_pred CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc-CCCCEEECCCCcCCCC-ch-hhhCCCccEEE
Confidence 99999999999998888887776 58999999999888 5665543 4566666666666653 21 34445555555
Q ss_pred ccCCccc
Q 010736 293 VSENRFQ 299 (502)
Q Consensus 293 ls~n~l~ 299 (502)
+++|+++
T Consensus 301 L~~N~l~ 307 (310)
T 4glp_A 301 LDGNPFL 307 (310)
T ss_dssp CSSTTTS
T ss_pred CcCCCCC
Confidence 5555544
No 80
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=5.6e-26 Score=223.96 Aligned_cols=266 Identities=13% Similarity=0.139 Sum_probs=182.3
Q ss_pred CCccceeeeCCCCCEEEEEecCCCCceecCcccCCCC--CCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCC-
Q 010736 58 PCAWSGISCNDAGRVINISLRGVGLKGKLHAFSFSSF--PHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGN- 134 (502)
Q Consensus 58 ~C~W~Gv~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~- 134 (502)
+..|.++.|+. ..++.++++++.+.+ ..+..+ ++++.|++++|.+.+..+. +.++++|++|+|++|.+++.
T Consensus 36 c~~W~~~~~~~-~~~~~l~l~~~~~~~----~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~ 109 (336)
T 2ast_B 36 CKRWYRLASDE-SLWQTLDLTGKNLHP----DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST 109 (336)
T ss_dssp CHHHHHHHTCS-TTSSEEECTTCBCCH----HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH
T ss_pred HHHHHHHhcCc-hhheeeccccccCCH----HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH
Confidence 34799998863 457889999887763 235666 7899999999999877665 56789999999999988765
Q ss_pred CCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccC-ccccc-CCcCCCCCCCCCeEEcccc-ccccc-CCcc
Q 010736 135 IPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSN-NLNGS-VPHSLGNLTQISMLFLHDN-SFSGF-IPPD 210 (502)
Q Consensus 135 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~ 210 (502)
+|..+..+++|++|++++|++++..+..++.+++|++|++++| .+++. ++..+..+++|++|++++| .+++. ++..
T Consensus 110 ~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 189 (336)
T 2ast_B 110 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVA 189 (336)
T ss_dssp HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHH
T ss_pred HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHH
Confidence 7777888889999999999888878888888888888888888 57652 5555677788888888888 77753 4555
Q ss_pred CcCCc-cCCccccccc--ccc-CcccccccCCCCCcEEEeeCcc-ccccCCCCCccccccEEECcCCcCcccCCccccCC
Q 010736 211 IGNLK-SISILSLAIN--QFS-GPIPLSLGNLTNLKQFSLVYNN-LYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRG 285 (502)
Q Consensus 211 ~~~l~-~L~~L~ls~N--~l~-~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~ 285 (502)
+..++ +|++|++++| .++ +.+|..+..+++|+.|++++|. +++. .+..+..+
T Consensus 190 ~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~-----------------------~~~~l~~l 246 (336)
T 2ast_B 190 VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKND-----------------------CFQEFFQL 246 (336)
T ss_dssp HHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGG-----------------------GGGGGGGC
T ss_pred HHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHH-----------------------HHHHHhCC
Confidence 66677 7777777777 344 3445555666667777666666 4433 33344555
Q ss_pred CCCcEEEccCCc-cccccCcccccCCCCcEEeCCCCccccccCcccCCC-CCCcEEEccCcccccccCccccC
Q 010736 286 GALQIFTVSENR-FQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIY-PNLTFIDLSRNNFYGEISSNFGE 356 (502)
Q Consensus 286 ~~L~~L~ls~n~-l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~ 356 (502)
++|+.|++++|. +.......+..+++|+.|++++| ++.. .+..+ .++..|++++|++++..|..++.
T Consensus 247 ~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 247 NYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp TTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccCCcccc
Confidence 666666666663 22221224566777777777766 3321 22222 22445556777777766665543
No 81
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=2.7e-23 Score=194.55 Aligned_cols=195 Identities=18% Similarity=0.133 Sum_probs=156.4
Q ss_pred CCCEEECCCCcccccCCccCcCCCCCCEEEccCCc-CcCCCCcccCCCCCCcEEEccC-CcCcccCCcccCCCCCCcEEE
Q 010736 96 HLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQ-FSGNIPHEVGLMSHLKILYIDS-NQLDGSIPLEVGQLSSMVELA 173 (502)
Q Consensus 96 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ 173 (502)
+|++|++++|++++..+..|.++++|++|++++|+ +++..+..|.++++|++|++++ |++++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 78889999999887777788889999999999996 8766666888888999999988 888877777888888999999
Q ss_pred cccCcccccCCcCCCCCCCCC---eEEcccc-cccccCCccCcCCccCC-ccccccccccCcccccccCCCCCcEEEeeC
Q 010736 174 LFSNNLNGSVPHSLGNLTQIS---MLFLHDN-SFSGFIPPDIGNLKSIS-ILSLAINQFSGPIPLSLGNLTNLKQFSLVY 248 (502)
Q Consensus 174 L~~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 248 (502)
+++|++++ +|. +..+++|+ +|++++| .+++..+..|..+++|+ .|++++|+++ .+|......++|+.|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCC
Confidence 99998886 665 77888887 8999998 88877777788888898 9999999888 4544433347889999999
Q ss_pred cc-ccccCCCCCcc--ccccEEECcCCcCcccCCccccCCCCCcEEEccCC
Q 010736 249 NN-LYGSIPPSLDN--LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSEN 296 (502)
Q Consensus 249 N~-l~~~~p~~~~~--~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n 296 (502)
|+ +++..+..+.. ..|+.|++++|++++..+. .+++|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 94 87665665654 4788999999998874433 5678888888765
No 82
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=3.5e-23 Score=193.82 Aligned_cols=179 Identities=16% Similarity=0.180 Sum_probs=131.4
Q ss_pred CCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCc-CcccCCcccCCCCCCcEEEccc-CcccccCCcCCCCCCCCCeE
Q 010736 119 TNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQ-LDGSIPLEVGQLSSMVELALFS-NNLNGSVPHSLGNLTQISML 196 (502)
Q Consensus 119 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L 196 (502)
++|++|++++|++++..+..|+++++|++|++++|+ +++..+..|..+++|++|++++ |++++..+..|..+++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 389999999999998777789999999999999997 8877777899999999999998 99997777788899999999
Q ss_pred EcccccccccCCccCcCCccCC---ccccccc-cccCcccccccCCCCCc-EEEeeCccccccCCCCCccccccEEECcC
Q 010736 197 FLHDNSFSGFIPPDIGNLKSIS---ILSLAIN-QFSGPIPLSLGNLTNLK-QFSLVYNNLYGSIPPSLDNLVLTKLSLDD 271 (502)
Q Consensus 197 ~L~~N~l~~~~p~~~~~l~~L~---~L~ls~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~~~L~~L~ls~ 271 (502)
++++|++++ +|. +..+++|+ .|++++| ++++..+..|.++++|+ .|++++|+++...+..+....|+.|++++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~ 188 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNK 188 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCC
Confidence 999999986 555 77777777 8888888 88766666677888888 88888887763222222223455555555
Q ss_pred Cc-CcccCCccccCC-CCCcEEEccCCccc
Q 010736 272 NH-FTSYLPQNICRG-GALQIFTVSENRFQ 299 (502)
Q Consensus 272 N~-l~~~~~~~~~~~-~~L~~L~ls~n~l~ 299 (502)
|+ +++..+..+..+ ++|+.|++++|+++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 52 444333333333 44444444444443
No 83
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=2e-25 Score=222.53 Aligned_cols=86 Identities=13% Similarity=0.091 Sum_probs=45.0
Q ss_pred CCcEEEccCCccccc----cCccccc-CCCCcEEeCCCCccccccC----cccCCCCCCcEEEccCcccccc-------c
Q 010736 287 ALQIFTVSENRFQGT----IPKSLRN-CTSLIRVRLDGNNLTGNIS----KAFGIYPNLTFIDLSRNNFYGE-------I 350 (502)
Q Consensus 287 ~L~~L~ls~n~l~~~----~~~~l~~-l~~L~~L~l~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~-------~ 350 (502)
+|+.|++++|.+++. ++..+.. .++|+.|++++|.+++..+ ..+..+++|+.|+|++|.+.+. +
T Consensus 197 ~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l 276 (362)
T 3goz_A 197 SVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKAL 276 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHH
T ss_pred CCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHH
Confidence 455555555555431 2333333 2356666666666654322 2334556666666666663322 2
Q ss_pred CccccCCCCCCeeeecCCcccc
Q 010736 351 SSNFGECPKLGALNISRNNITG 372 (502)
Q Consensus 351 ~~~~~~~~~L~~L~l~~N~l~~ 372 (502)
+..+..+++|++||+++|++..
T Consensus 277 ~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 277 GAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HTTSTTCCEEEEECTTSCBCCG
T ss_pred HHHhccCCceEEEecCCCcCCC
Confidence 2345556666677777776643
No 84
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=1.6e-22 Score=190.76 Aligned_cols=176 Identities=23% Similarity=0.250 Sum_probs=137.4
Q ss_pred CCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcc
Q 010736 96 HLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALF 175 (502)
Q Consensus 96 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 175 (502)
..++++++++.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|++|+++
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4678999999888 5666665 689999999999998888888999999999999999988888788889999999999
Q ss_pred cCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccC
Q 010736 176 SNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSI 255 (502)
Q Consensus 176 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 255 (502)
+|++++..+..|..+++|++|+|++|++++..+..|..+++|++|++++|++++..+..|..+++|+.|++++|++++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 99998777777888888889999888888777767788888888888888888766667777778888877777776444
Q ss_pred CCCCcc-ccccEEECcCCcC
Q 010736 256 PPSLDN-LVLTKLSLDDNHF 274 (502)
Q Consensus 256 p~~~~~-~~L~~L~ls~N~l 274 (502)
+..+.. ..|+.|++++|.+
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~ 191 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQF 191 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCB
T ss_pred HHHHhCCCCCCEEEeeCCce
Confidence 433332 3344444444443
No 85
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=1.1e-25 Score=226.26 Aligned_cols=94 Identities=17% Similarity=0.258 Sum_probs=70.3
Q ss_pred cccCCCCCcEEEccCCccc----cccCcccccCCCCcEEeCCCCccccc----cCccc--CCCCCCcEEEccCccccc--
Q 010736 281 NICRGGALQIFTVSENRFQ----GTIPKSLRNCTSLIRVRLDGNNLTGN----ISKAF--GIYPNLTFIDLSRNNFYG-- 348 (502)
Q Consensus 281 ~~~~~~~L~~L~ls~n~l~----~~~~~~l~~l~~L~~L~l~~N~l~~~----~~~~~--~~l~~L~~L~Ls~N~l~~-- 348 (502)
.+..+++|+.|++++|.++ +.+|..+..+++|+.|+|++|.+++. ++..+ +.+++|++|+|++|.+++
T Consensus 211 ~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g 290 (386)
T 2ca6_A 211 GLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDA 290 (386)
T ss_dssp TGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHH
T ss_pred HhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHH
Confidence 5556677777777777775 45667777888888888888888765 34444 347888899999888887
Q ss_pred --ccCccc-cCCCCCCeeeecCCcccccc
Q 010736 349 --EISSNF-GECPKLGALNISRNNITGDF 374 (502)
Q Consensus 349 --~~~~~~-~~~~~L~~L~l~~N~l~~df 374 (502)
.+|..+ ..+++|++|++++|++.++.
T Consensus 291 ~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 291 VRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 366666 56789999999999887654
No 86
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.89 E-value=6.9e-23 Score=187.53 Aligned_cols=182 Identities=24% Similarity=0.276 Sum_probs=131.0
Q ss_pred CCccceeeeCCCCCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCc
Q 010736 58 PCAWSGISCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPH 137 (502)
Q Consensus 58 ~C~W~Gv~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 137 (502)
.|.|.+|.|+..+ ++ .+|. .-.++|++|++++|++++..+..|.++++|++|++++|++++..+.
T Consensus 6 ~C~~~~v~c~~~~-----------l~-~~p~---~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (208)
T 2o6s_A 6 SCSGTTVECYSQG-----------RT-SVPT---GIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG 70 (208)
T ss_dssp EEETTEEECCSSC-----------CS-SCCS---CCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EECCCEEEecCCC-----------cc-CCCC---CCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh
Confidence 4799999997532 11 2222 2245777888888887766666677778888888888888766555
Q ss_pred ccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccC
Q 010736 138 EVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSI 217 (502)
Q Consensus 138 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 217 (502)
.|..+++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++|++++..+..+..+++|
T Consensus 71 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 150 (208)
T 2o6s_A 71 VFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSL 150 (208)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred hcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCc
Confidence 67777788888888888776666667777888888888888776666667777788888888888776666667777788
Q ss_pred CccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCcc
Q 010736 218 SILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN 261 (502)
Q Consensus 218 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 261 (502)
+.|++++|.+.+ .+++|+.|+++.|+++|.+|..++.
T Consensus 151 ~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 151 QYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp CEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSS
T ss_pred cEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCcc
Confidence 888888776664 3456777777778887777776654
No 87
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=2.5e-25 Score=221.82 Aligned_cols=256 Identities=17% Similarity=0.142 Sum_probs=148.4
Q ss_pred EEecCCCCceecCcccCCCCCCCCEEECCCCcccccCC----ccCcCCC-CCCEEEccCCcCcCCCCcccCCC-----CC
Q 010736 75 ISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIP----PQISNLT-NLSILSLGGNQFSGNIPHEVGLM-----SH 144 (502)
Q Consensus 75 L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p----~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l-----~~ 144 (502)
.+++.++++|.+|.. +...++|++|+|++|.+++..+ ..|.+++ +|++|+|++|.+++..+..+..+ ++
T Consensus 3 ~~ls~n~~~~~~~~~-~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEEF-TSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHHH-HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHHH-HhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 456777777776653 5555557777777777776655 5666777 77777777777776666666554 77
Q ss_pred CcEEEccCCcCcccCCccc----CCC-CCCcEEEcccCcccccCCcCC----CC-CCCCCeEEcccccccccCC----cc
Q 010736 145 LKILYIDSNQLDGSIPLEV----GQL-SSMVELALFSNNLNGSVPHSL----GN-LTQISMLFLHDNSFSGFIP----PD 210 (502)
Q Consensus 145 L~~L~Ls~N~l~~~~p~~~----~~l-~~L~~L~L~~N~l~~~~p~~~----~~-l~~L~~L~L~~N~l~~~~p----~~ 210 (502)
|++|+|++|++++..+..+ ..+ ++|++|++++|++++..+..+ .. .++|++|++++|.+++..+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 7777777777776555533 333 677777777777765544332 22 2467777777777664322 22
Q ss_pred CcCCc-cCCccccccccccCccccccc----CC-CCCcEEEeeCccccccCCCCCccccccEEECcCCcCcccCCccccC
Q 010736 211 IGNLK-SISILSLAINQFSGPIPLSLG----NL-TNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICR 284 (502)
Q Consensus 211 ~~~l~-~L~~L~ls~N~l~~~~p~~~~----~l-~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~ 284 (502)
+..++ +|++|++++|++++..+..+. .+ ++|+.|++++|.+++..... ++..+..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~-------------------l~~~l~~ 222 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAE-------------------LAYIFSS 222 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHH-------------------HHHHHHH
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHH-------------------HHHHHhc
Confidence 23333 566666666666554443322 22 35666666666555321110 1222222
Q ss_pred -CCCCcEEEccCCccccccC----cccccCCCCcEEeCCCCccccc-------cCcccCCCCCCcEEEccCccccccc
Q 010736 285 -GGALQIFTVSENRFQGTIP----KSLRNCTSLIRVRLDGNNLTGN-------ISKAFGIYPNLTFIDLSRNNFYGEI 350 (502)
Q Consensus 285 -~~~L~~L~ls~n~l~~~~~----~~l~~l~~L~~L~l~~N~l~~~-------~~~~~~~l~~L~~L~Ls~N~l~~~~ 350 (502)
.++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.+. ++..+..+++|+.||+++|++....
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~ 300 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSH 300 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGG
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcc
Confidence 2355566666665554322 2234556666666666663322 2235566677777777777776543
No 88
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=3.5e-25 Score=222.76 Aligned_cols=238 Identities=17% Similarity=0.227 Sum_probs=146.0
Q ss_pred CCCCCCCCEEECCCCcccccC----CccCcCCCCCCEEEccCC---cCcCCCCccc-------CCCCCCcEEEccCCcCc
Q 010736 91 FSSFPHLAYLDLRDNKLFGTI----PPQISNLTNLSILSLGGN---QFSGNIPHEV-------GLMSHLKILYIDSNQLD 156 (502)
Q Consensus 91 ~~~l~~L~~L~Ls~N~l~g~~----p~~l~~l~~L~~L~Ls~N---~l~~~~p~~l-------~~l~~L~~L~Ls~N~l~ 156 (502)
+..+++|++|+|++|.+++.. +..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|+++
T Consensus 28 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 107 (386)
T 2ca6_A 28 LLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFG 107 (386)
T ss_dssp HHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCC
T ss_pred HhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCC
Confidence 556677777777777776553 334667777777777774 4445555544 56677777777777766
Q ss_pred c----cCCcccCCCCCCcEEEcccCcccccCCcCCC----CC---------CCCCeEEccccccc-ccCC---ccCcCCc
Q 010736 157 G----SIPLEVGQLSSMVELALFSNNLNGSVPHSLG----NL---------TQISMLFLHDNSFS-GFIP---PDIGNLK 215 (502)
Q Consensus 157 ~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~-~~~p---~~~~~l~ 215 (502)
+ .+|..+..+++|++|+|++|.++...+..+. .+ ++|++|++++|+++ +.++ ..+..++
T Consensus 108 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~ 187 (386)
T 2ca6_A 108 PTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHR 187 (386)
T ss_dssp TTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCC
Confidence 5 3555566666666666666666533322222 22 55555555555554 2222 2333444
Q ss_pred cCCcccccccccc--C---cccccccCCCCCcEEEeeCccccccCCCCCccccccEEECcCCcCc----ccCCccccCCC
Q 010736 216 SISILSLAINQFS--G---PIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFT----SYLPQNICRGG 286 (502)
Q Consensus 216 ~L~~L~ls~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~----~~~~~~~~~~~ 286 (502)
+|+.|++++|+++ | ..|..+..++ .|+.|++++|.++ ..+|..+..++
T Consensus 188 ~L~~L~L~~n~l~~~g~~~l~~~~l~~~~-----------------------~L~~L~Ls~n~l~~~g~~~l~~~l~~~~ 244 (386)
T 2ca6_A 188 LLHTVKMVQNGIRPEGIEHLLLEGLAYCQ-----------------------ELKVLDLQDNTFTHLGSSALAIALKSWP 244 (386)
T ss_dssp TCCEEECCSSCCCHHHHHHHHHTTGGGCT-----------------------TCCEEECCSSCCHHHHHHHHHHHGGGCT
T ss_pred CcCEEECcCCCCCHhHHHHHHHHHhhcCC-----------------------CccEEECcCCCCCcHHHHHHHHHHccCC
Confidence 4444444444443 1 1222333444 4555555555553 33556667778
Q ss_pred CCcEEEccCCccccc----cCccccc--CCCCcEEeCCCCcccc----ccCccc-CCCCCCcEEEccCcccccccC
Q 010736 287 ALQIFTVSENRFQGT----IPKSLRN--CTSLIRVRLDGNNLTG----NISKAF-GIYPNLTFIDLSRNNFYGEIS 351 (502)
Q Consensus 287 ~L~~L~ls~n~l~~~----~~~~l~~--l~~L~~L~l~~N~l~~----~~~~~~-~~l~~L~~L~Ls~N~l~~~~~ 351 (502)
+|+.|++++|.+++. ++..+.. +++|+.|++++|.+++ .++..+ ..+++|++|++++|++++..+
T Consensus 245 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 245 NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp TCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 888888888888765 4555533 8889999999999987 366655 567999999999999886653
No 89
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=3.8e-23 Score=216.04 Aligned_cols=209 Identities=22% Similarity=0.303 Sum_probs=143.1
Q ss_pred CCCC-----cccee-eeCCCCCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCC
Q 010736 56 ISPC-----AWSGI-SCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGN 129 (502)
Q Consensus 56 ~~~C-----~W~Gv-~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N 129 (502)
.+|| .|.|+ .|.. ++++.|+|+++++++ +|.. + +++|++|+|++|+|+ .+| ..+++|++|+|++|
T Consensus 40 ~~~~~~~~~~~~~l~~C~~-~~L~~L~Ls~n~L~~-lp~~-l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N 110 (571)
T 3cvr_A 40 ALPGENRNEAVSLLKECLI-NQFSELQLNRLNLSS-LPDN-L--PPQITVLEITQNALI-SLP---ELPASLEYLDACDN 110 (571)
T ss_dssp CCTTCCHHHHHHHHHHHHH-TTCSEEECCSSCCSC-CCSC-C--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSS
T ss_pred CCccccccchhhhcccccc-CCccEEEeCCCCCCc-cCHh-H--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCC
Confidence 5678 79999 7864 578888888888886 6664 3 377888888888888 566 45678888888888
Q ss_pred cCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCc
Q 010736 130 QFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPP 209 (502)
Q Consensus 130 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 209 (502)
+|++ +|. +.. +|++|+|++|++++ +|. .+++|+.|++++|++++ +|. .+++|++|++++|++++ +|.
T Consensus 111 ~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~ 177 (571)
T 3cvr_A 111 RLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE 177 (571)
T ss_dssp CCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC
T ss_pred CCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch
Confidence 8886 666 554 78888888888876 554 56777777887777775 554 45677777777777765 444
Q ss_pred cCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCccccccEEECcCCcCcccCCccccCCCCCc
Q 010736 210 DIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQ 289 (502)
Q Consensus 210 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~ 289 (502)
+. ++|+.|++++|+|+ .+|. +.. +| . .....++.|++++|+|+. +|..+..+++|+
T Consensus 178 -l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L----------~------~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~ 233 (571)
T 3cvr_A 178 -LP--ESLEALDVSTNLLE-SLPA-VPV--RN----------H------HSEETEIFFRCRENRITH-IPENILSLDPTC 233 (571)
T ss_dssp -CC--TTCCEEECCSSCCS-SCCC-CC--------------------------CCEEEECCSSCCCC-CCGGGGGSCTTE
T ss_pred -hh--CCCCEEECcCCCCC-chhh-HHH--hh----------h------cccccceEEecCCCccee-cCHHHhcCCCCC
Confidence 44 56666666666665 3333 322 22 0 000123677777777765 566677788888
Q ss_pred EEEccCCccccccCcccccCC
Q 010736 290 IFTVSENRFQGTIPKSLRNCT 310 (502)
Q Consensus 290 ~L~ls~n~l~~~~~~~l~~l~ 310 (502)
.|++++|.+++.+|..+..+.
T Consensus 234 ~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 234 TIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp EEECCSSSCCHHHHHHHHHHH
T ss_pred EEEeeCCcCCCcCHHHHHHhh
Confidence 888888888887777766543
No 90
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=7.9e-25 Score=215.75 Aligned_cols=249 Identities=15% Similarity=0.161 Sum_probs=189.6
Q ss_pred CCCEEECCCCcccccCCccCcCC--CCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCccc-CCcccCCCCCCcEE
Q 010736 96 HLAYLDLRDNKLFGTIPPQISNL--TNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGS-IPLEVGQLSSMVEL 172 (502)
Q Consensus 96 ~L~~L~Ls~N~l~g~~p~~l~~l--~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L 172 (502)
.++.+++++|.+. |..+..+ ++++.|++++|.+++..+. +..+++|++|++++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4789999999876 4566677 8899999999999877665 56788999999999998865 77778888999999
Q ss_pred EcccCcccccCCcCCCCCCCCCeEEcccc-ccccc-CCccCcCCccCCccccccc-cccCc-ccccccCCC-CCcEEEee
Q 010736 173 ALFSNNLNGSVPHSLGNLTQISMLFLHDN-SFSGF-IPPDIGNLKSISILSLAIN-QFSGP-IPLSLGNLT-NLKQFSLV 247 (502)
Q Consensus 173 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~ls~N-~l~~~-~p~~~~~l~-~L~~L~l~ 247 (502)
++++|.+++..+..++.+++|++|++++| .+++. ++..+..+++|++|++++| .+++. ++..+..++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999888777777888888899998888 56652 4555667778888888888 77653 455566677 77777777
Q ss_pred CccccccCCCCCccccccEEECcCCcCc-ccCCccccCCCCCcEEEccCCc-cccccCcccccCCCCcEEeCCCCc-ccc
Q 010736 248 YNNLYGSIPPSLDNLVLTKLSLDDNHFT-SYLPQNICRGGALQIFTVSENR-FQGTIPKSLRNCTSLIRVRLDGNN-LTG 324 (502)
Q Consensus 248 ~N~l~~~~p~~~~~~~L~~L~ls~N~l~-~~~~~~~~~~~~L~~L~ls~n~-l~~~~~~~l~~l~~L~~L~l~~N~-l~~ 324 (502)
+|.+ .++ +.++..+..+++|+.|++++|. +++..+..+..+++|+.|++++|. +..
T Consensus 204 ~~~~---------------------~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~ 262 (336)
T 2ast_B 204 GYRK---------------------NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIP 262 (336)
T ss_dssp SCGG---------------------GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCG
T ss_pred CCcc---------------------cCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCH
Confidence 6632 121 2234456677899999999999 777778889999999999999995 433
Q ss_pred ccCcccCCCCCCcEEEccCcccccccCccccCC-CCCCeeeecCCccccc
Q 010736 325 NISKAFGIYPNLTFIDLSRNNFYGEISSNFGEC-PKLGALNISRNNITGD 373 (502)
Q Consensus 325 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~~L~~L~l~~N~l~~d 373 (502)
.....+..+++|+.|++++| +.. ..+..+ ..+..|++++|++++.
T Consensus 263 ~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~ 308 (336)
T 2ast_B 263 ETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTI 308 (336)
T ss_dssp GGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCT
T ss_pred HHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccc
Confidence 32336788999999999998 432 233333 3477788999998754
No 91
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=2.5e-22 Score=195.41 Aligned_cols=195 Identities=23% Similarity=0.317 Sum_probs=130.1
Q ss_pred CCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCc
Q 010736 91 FSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMV 170 (502)
Q Consensus 91 ~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 170 (502)
+..+++|++|++++|.++. +| .+..+++|++|+|++|.+++..+ +..+++|++|++++|++++. + .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCC
Confidence 4456777888888887774 44 57778888888888888875433 77788888888888887753 3 577777888
Q ss_pred EEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCcc
Q 010736 171 ELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNN 250 (502)
Q Consensus 171 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 250 (502)
+|++++|++++. +. +..+++|++|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|+
T Consensus 111 ~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 888888877753 32 6777777777777777775433 6667777777777777765333 6666677777776666
Q ss_pred ccccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCcccc
Q 010736 251 LYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTG 324 (502)
Q Consensus 251 l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~ 324 (502)
+++..+ +..+++|+.|++++|++++.. .+..+++|+.|++++|.+++
T Consensus 185 l~~~~~-------------------------l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 185 ISDISP-------------------------LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCCGG-------------------------GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred cCcChh-------------------------hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 653211 344455666666666665433 25566666666666666653
No 92
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=1.2e-21 Score=194.02 Aligned_cols=244 Identities=14% Similarity=0.087 Sum_probs=133.4
Q ss_pred CccceeeeCCCCCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCC-c
Q 010736 59 CAWSGISCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIP-H 137 (502)
Q Consensus 59 C~W~Gv~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~ 137 (502)
|.|..|.|+ +++++ .+|.. + .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| .
T Consensus 9 C~~~~v~C~-----------~~~Lt-~iP~~-l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 9 CSNRVFLCQ-----------ESKVT-EIPSD-L--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp EETTEEEEE-----------STTCC-SCCTT-C--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred eeCCEEEec-----------CCCCC-ccCcC-c--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 466666664 33444 44543 3 2568888888888886655678888888888888888766555 3
Q ss_pred ccCCCCCCcE-EEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEccc-ccccccCCccCcCCc
Q 010736 138 EVGLMSHLKI-LYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHD-NSFSGFIPPDIGNLK 215 (502)
Q Consensus 138 ~l~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~ 215 (502)
.|.++++|+. +.+++|+++...|..|..+++|++|++++|++++..+..+....++..+++.+ |++....+..|..+.
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~ 153 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 153 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc
Confidence 5677777654 55566777766677777777777777777777755555555555666666643 344433333333322
Q ss_pred cCCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCccccccEEECcC-CcCcccCCccccCCCCCcEEEcc
Q 010736 216 SISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDD-NHFTSYLPQNICRGGALQIFTVS 294 (502)
Q Consensus 216 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~-N~l~~~~~~~~~~~~~L~~L~ls 294 (502)
..++.|++++|+++...+..+....++.+++++ |.++.+.+..|..+++|+.|+++
T Consensus 154 -----------------------~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs 210 (350)
T 4ay9_X 154 -----------------------FESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDIS 210 (350)
T ss_dssp -----------------------SSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECT
T ss_pred -----------------------hhhhhhccccccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcC
Confidence 134445555555543322333334445555543 33333333344555556666666
Q ss_pred CCccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCc
Q 010736 295 ENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRN 344 (502)
Q Consensus 295 ~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 344 (502)
+|+++...+..+ .+|+.|++.++.--..+| .+..+++|+.+++.++
T Consensus 211 ~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 211 RTRIHSLPSYGL---ENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp TSCCCCCCSSSC---TTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCH
T ss_pred CCCcCccChhhh---ccchHhhhccCCCcCcCC-CchhCcChhhCcCCCC
Confidence 665553222222 233333332222112233 2444555555555443
No 93
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=5.6e-22 Score=192.87 Aligned_cols=209 Identities=22% Similarity=0.352 Sum_probs=158.5
Q ss_pred EEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCc
Q 010736 99 YLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNN 178 (502)
Q Consensus 99 ~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 178 (502)
.+.+..+.+++.++ +..+++|++|++++|.++. +| .+..+++|++|++++|++++..+ +..+++|++|++++|+
T Consensus 23 ~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~ 96 (308)
T 1h6u_A 23 KIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNP 96 (308)
T ss_dssp HHHTTCSSTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCC
T ss_pred HHHhCCCCcCceec--HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCc
Confidence 34455666654433 4568889999999999884 55 57888999999999999885444 8888889999998888
Q ss_pred ccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccCCCC
Q 010736 179 LNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPS 258 (502)
Q Consensus 179 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 258 (502)
+++. + .+..+++|++|++++|++++. + .+..+++|+.|++++|++++..+ +..+++|+.|++++|.++
T Consensus 97 l~~~-~-~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~------ 164 (308)
T 1h6u_A 97 LKNV-S-AIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVS------ 164 (308)
T ss_dssp CSCC-G-GGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC------
T ss_pred CCCc-h-hhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCC------
Confidence 8753 3 577888888888888888764 2 26677777777777777765433 555666666666655554
Q ss_pred CccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcE
Q 010736 259 LDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTF 338 (502)
Q Consensus 259 ~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 338 (502)
+..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++.. .+..+++|+.
T Consensus 165 -----------------~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~ 221 (308)
T 1h6u_A 165 -----------------DLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFI 221 (308)
T ss_dssp -----------------CCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCE
T ss_pred -----------------CChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCE
Confidence 3222 6677889999999999986543 889999999999999999765 3889999999
Q ss_pred EEccCccccc
Q 010736 339 IDLSRNNFYG 348 (502)
Q Consensus 339 L~Ls~N~l~~ 348 (502)
|++++|.+++
T Consensus 222 L~l~~N~i~~ 231 (308)
T 1h6u_A 222 VTLTNQTITN 231 (308)
T ss_dssp EEEEEEEEEC
T ss_pred EEccCCeeec
Confidence 9999999975
No 94
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=1.4e-21 Score=204.18 Aligned_cols=193 Identities=22% Similarity=0.327 Sum_probs=134.9
Q ss_pred CCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcc
Q 010736 96 HLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALF 175 (502)
Q Consensus 96 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 175 (502)
+|+.|+|++|++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|++++|+|++ +|. +.. +|+.|+++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 78888888888876 666553 77888888888888 566 446788888888888876 665 554 78888888
Q ss_pred cCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccC
Q 010736 176 SNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSI 255 (502)
Q Consensus 176 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 255 (502)
+|++++ +|. .+++|++|++++|.+++ +|. .+++|+.|++++|++++ +|. +. ++|+.|++++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 888776 555 56777777777777775 443 35666666666666665 444 43 55666666666655 33
Q ss_pred CCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCC
Q 010736 256 PPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGI 332 (502)
Q Consensus 256 p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 332 (502)
|. +.. .| ......|+.|++++|+++ .+|..+..+++|+.|++++|.+++.+|..+..
T Consensus 196 p~-~~~-~L-----------------~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 196 PA-VPV-RN-----------------HHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp CC-CC--------------------------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHH
T ss_pred hh-HHH-hh-----------------hcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHH
Confidence 32 211 00 011233499999999999 68888888999999999999999988776654
No 95
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=1.5e-21 Score=178.65 Aligned_cols=179 Identities=20% Similarity=0.162 Sum_probs=143.2
Q ss_pred CEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccC
Q 010736 98 AYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSN 177 (502)
Q Consensus 98 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 177 (502)
+.++.+++.++ .+|..+ .++|++|++++|++++..+..|+.+++|++|++++|++++..+..|..+++|++|++++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 56788888887 456544 468999999999999777777899999999999999999776677889999999999999
Q ss_pred cccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccCCC
Q 010736 178 NLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPP 257 (502)
Q Consensus 178 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 257 (502)
++++..+..|..+++|++|++++|++++..+..+..+++|++|++++|++++..+..+..+++|+.|++++|.+.+..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~- 165 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP- 165 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT-
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC-
Confidence 9997777778899999999999999998777778888999999999999987777678888888888888887764332
Q ss_pred CCccccccEEECcCCcCcccCCccccCC
Q 010736 258 SLDNLVLTKLSLDDNHFTSYLPQNICRG 285 (502)
Q Consensus 258 ~~~~~~L~~L~ls~N~l~~~~~~~~~~~ 285 (502)
.++.|+++.|++++.+|..++.+
T Consensus 166 -----~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 166 -----GIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp -----TTHHHHHHHHHCTTTBBCTTSSB
T ss_pred -----CHHHHHHHHHhCCceeeccCccc
Confidence 34555555666665555554433
No 96
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=5.4e-21 Score=189.46 Aligned_cols=242 Identities=12% Similarity=0.079 Sum_probs=145.6
Q ss_pred CEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCc-ccCCCCCCcEEEccc
Q 010736 98 AYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPL-EVGQLSSMVELALFS 176 (502)
Q Consensus 98 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~ 176 (502)
++++.++++++ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.+++++++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~----- 83 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHE----- 83 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCE-----
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhh-----
Confidence 34555555555 445443 23555555555555533333455555555555555555433332 3444444332
Q ss_pred CcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeC-ccccccC
Q 010736 177 NNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVY-NNLYGSI 255 (502)
Q Consensus 177 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~ 255 (502)
.+.++.|+++...|..|..+++|++|++++|+++...+..+....++..+++.+ +++....
T Consensus 84 ------------------~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~ 145 (350)
T 4ay9_X 84 ------------------IRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIE 145 (350)
T ss_dssp ------------------EEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEEC
T ss_pred ------------------hhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccccc
Confidence 233344455544445555555555555555555544444444555566677654 4555433
Q ss_pred CCCCcc--ccccEEECcCCcCcccCCccccCCCCCcEEEccC-CccccccCcccccCCCCcEEeCCCCccccccCcccCC
Q 010736 256 PPSLDN--LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSE-NRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGI 332 (502)
Q Consensus 256 p~~~~~--~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~-n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 332 (502)
+..+.. ..++.|++++|+++.+ +.......+|+.+++++ |.++...+..|..+++|++|++++|+++...+..+
T Consensus 146 ~~~f~~~~~~l~~L~L~~N~i~~i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~-- 222 (350)
T 4ay9_X 146 RNSFVGLSFESVILWLNKNGIQEI-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL-- 222 (350)
T ss_dssp TTSSTTSBSSCEEEECCSSCCCEE-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC--
T ss_pred ccchhhcchhhhhhccccccccCC-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh--
Confidence 344443 4688999999999975 44455667899999975 66664444678999999999999999996655444
Q ss_pred CCCCcEEEccCcccccccCccccCCCCCCeeeecCCcc
Q 010736 333 YPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNI 370 (502)
Q Consensus 333 l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l 370 (502)
.+|+.|.+.++.-...+| .+..+++|+.+++.++..
T Consensus 223 -~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~~ 258 (350)
T 4ay9_X 223 -ENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYPSH 258 (350)
T ss_dssp -TTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCHHH
T ss_pred -ccchHhhhccCCCcCcCC-CchhCcChhhCcCCCCcc
Confidence 556666655544344566 478899999999975543
No 97
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.86 E-value=5.3e-21 Score=177.68 Aligned_cols=160 Identities=23% Similarity=0.289 Sum_probs=133.6
Q ss_pred CCCCccceeeeCCCCCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCC
Q 010736 56 ISPCAWSGISCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNI 135 (502)
Q Consensus 56 ~~~C~W~Gv~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~ 135 (502)
...|.|.+|.|+.. ++ +.+|.. + .++|++|+|++|++++..|..|.++++|++|+|++|+|+...
T Consensus 16 ~~~Cs~~~v~c~~~-~l-----------~~ip~~-~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~ 80 (229)
T 3e6j_A 16 QCSCSGTTVDCRSK-RH-----------ASVPAG-I--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALP 80 (229)
T ss_dssp TCEEETTEEECTTS-CC-----------SSCCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCEEeCCEeEccCC-Cc-----------CccCCC-C--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcC
Confidence 46899999999752 22 234442 3 378999999999999988999999999999999999998666
Q ss_pred CcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCc
Q 010736 136 PHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLK 215 (502)
Q Consensus 136 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 215 (502)
+..|..+++|++|+|++|++++..+..|..+++|++|++++|+++ .+|..+..+++|++|++++|++++..+..+..++
T Consensus 81 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 159 (229)
T 3e6j_A 81 VGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLS 159 (229)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCC
Confidence 677899999999999999999777777889999999999999998 6788888889999999999998877777788888
Q ss_pred cCCccccccccccCcc
Q 010736 216 SISILSLAINQFSGPI 231 (502)
Q Consensus 216 ~L~~L~ls~N~l~~~~ 231 (502)
+|+.|++++|.+.+..
T Consensus 160 ~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 160 SLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TCCEEECTTSCBCTTB
T ss_pred CCCEEEeeCCCccCCc
Confidence 8888888888887544
No 98
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.85 E-value=8.3e-23 Score=220.86 Aligned_cols=257 Identities=18% Similarity=0.164 Sum_probs=135.9
Q ss_pred CHHHHHHHHHHHhhcCcCCCCCCCCCCCCCCCCCCCCCCCccceeeeCCCCCEEEEEecCCCCceecCcccCCCCCCCCE
Q 010736 20 TNEEADALLKWKASLQIHNRSLLSSWIKDTSNVSSKISPCAWSGISCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAY 99 (502)
Q Consensus 20 ~~~d~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~~C~W~Gv~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~ 99 (502)
...+.++|+++..+.....+..-..|... ....+.|.+++++. ++++.++|.++++... +.. .|+.
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~-~~~------~l~~ 195 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGD------STPSGTATNSAVST-PLTPKIELFANGKDEA-NQA------LLQH 195 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCC------CCccccCCCceecC-CccceEEeeCCCCCcc-hhh------Hhhc
Confidence 34577889999887743222223345332 23456899999875 7899999999888753 222 2334
Q ss_pred EECCCCcccc---------cCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCc
Q 010736 100 LDLRDNKLFG---------TIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMV 170 (502)
Q Consensus 100 L~Ls~N~l~g---------~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 170 (502)
++|++|.|.+ ..|..+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|+|+ .+|..|+.+++|+
T Consensus 196 l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~ 273 (727)
T 4b8c_D 196 KKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLR 273 (727)
T ss_dssp --------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCC
T ss_pred CccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCC
Confidence 4444444433 45778899999999999999998 78888889999999999999999 8888899999999
Q ss_pred EEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCC-CcEEEeeCc
Q 010736 171 ELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTN-LKQFSLVYN 249 (502)
Q Consensus 171 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~-L~~L~l~~N 249 (502)
+|+|++|+|+ .+|..|+.+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|.+++.+|..+..+.. +..+++++|
T Consensus 274 ~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N 351 (727)
T 4b8c_D 274 VLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDN 351 (727)
T ss_dssp EEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccC
Confidence 9999999999 77999999999999999999997 67888999999999999999999988887765432 234778899
Q ss_pred cccccCCCCCccccccEEECcCC--------cCcccCCccccCCCCCcEEEccCCccc
Q 010736 250 NLYGSIPPSLDNLVLTKLSLDDN--------HFTSYLPQNICRGGALQIFTVSENRFQ 299 (502)
Q Consensus 250 ~l~~~~p~~~~~~~L~~L~ls~N--------~l~~~~~~~~~~~~~L~~L~ls~n~l~ 299 (502)
.+++.+|..+ ..|+++.| .+.+..+..+..+..+....++.|.+.
T Consensus 352 ~l~~~~p~~l-----~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 352 RPEIPLPHER-----RFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp CCCCCCCCC----------------------------------------------CCC
T ss_pred cccCcCcccc-----ceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 9998888654 44555555 333333334445555566666777664
No 99
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.84 E-value=3.6e-23 Score=219.78 Aligned_cols=306 Identities=12% Similarity=0.062 Sum_probs=171.3
Q ss_pred CCEEEEEecCCCCcee----cCcccCCCCCCCCEEECCCCccc----ccCCccCcCCCCCCEEEccCCcCcCCCCcccCC
Q 010736 70 GRVINISLRGVGLKGK----LHAFSFSSFPHLAYLDLRDNKLF----GTIPPQISNLTNLSILSLGGNQFSGNIPHEVGL 141 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~----l~~~~~~~l~~L~~L~Ls~N~l~----g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~ 141 (502)
..++.|+|+++.+++. ++.. +..+++|++|++++|.++ +.++..+.++++|++|+|++|.+.+ +|..+..
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~-~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~ 241 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHEL-AQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKA 241 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHH-HHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHH
T ss_pred CCCCEEECccccccCcchhHHHHH-HhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhh
Confidence 4678888888877654 3322 556788888888888886 3445556678888888888888774 5566666
Q ss_pred CCCCcEEEccCCcCc---ccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEccccccccc------------
Q 010736 142 MSHLKILYIDSNQLD---GSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGF------------ 206 (502)
Q Consensus 142 l~~L~~L~Ls~N~l~---~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~------------ 206 (502)
+++|++|+++.+... +..+..+..+++|+.|+++++.. +.+|..+..+++|++|++++|.+++.
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L 320 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNL 320 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTC
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCC
Confidence 777777777643222 12223344445555555544322 23444444445555555555544322
Q ss_pred -------------CCccCcCCccCCccccc-----------cccccCc-ccccccCCCCCcEEEeeCccccccCCCCCcc
Q 010736 207 -------------IPPDIGNLKSISILSLA-----------INQFSGP-IPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN 261 (502)
Q Consensus 207 -------------~p~~~~~l~~L~~L~ls-----------~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 261 (502)
++..+..+++|++|+++ .|.+++. ++.....+++|++|+++.|.+++..+..+..
T Consensus 321 ~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~ 400 (592)
T 3ogk_B 321 EVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGT 400 (592)
T ss_dssp CEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHH
T ss_pred CEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHh
Confidence 12222334445555555 2333322 1111233555566666555555433322221
Q ss_pred --ccccEEECc----CCcCccc-----CCccccCCCCCcEEEccCC--ccccccCcccc-cCCCCcEEeCCCCccccc-c
Q 010736 262 --LVLTKLSLD----DNHFTSY-----LPQNICRGGALQIFTVSEN--RFQGTIPKSLR-NCTSLIRVRLDGNNLTGN-I 326 (502)
Q Consensus 262 --~~L~~L~ls----~N~l~~~-----~~~~~~~~~~L~~L~ls~n--~l~~~~~~~l~-~l~~L~~L~l~~N~l~~~-~ 326 (502)
..|+.|+++ .|.+++. ++..+..+++|+.|+++.+ .+++.....+. .+++|+.|++++|.+++. +
T Consensus 401 ~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~ 480 (592)
T 3ogk_B 401 YLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGL 480 (592)
T ss_dssp HCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHH
T ss_pred hCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHH
Confidence 356666664 5555542 2222445666777777543 24443333333 367788888887777653 2
Q ss_pred CcccCCCCCCcEEEccCcccccc-cCccccCCCCCCeeeecCCccccccCcccc
Q 010736 327 SKAFGIYPNLTFIDLSRNNFYGE-ISSNFGECPKLGALNISRNNITGDFGIAKF 379 (502)
Q Consensus 327 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~~~~L~~L~l~~N~l~~dfGl~~l 379 (502)
+..+..+++|++|++++|.+++. ++..+..+++|++|++++|++ .+.|+..+
T Consensus 481 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~i-t~~~~~~l 533 (592)
T 3ogk_B 481 MEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRA-SMTGQDLM 533 (592)
T ss_dssp HHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBC-CTTCTTGG
T ss_pred HHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcC-CHHHHHHH
Confidence 33345677888888888877644 233345677888888888884 44454433
No 100
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.84 E-value=3.7e-23 Score=219.67 Aligned_cols=301 Identities=14% Similarity=0.066 Sum_probs=192.9
Q ss_pred CEEEEEecCCC-Cce-ecCcccCCCCCCCCEEECCCCccccc----CCccCcCCCCCCEEEccCCcCcC----CCCcccC
Q 010736 71 RVINISLRGVG-LKG-KLHAFSFSSFPHLAYLDLRDNKLFGT----IPPQISNLTNLSILSLGGNQFSG----NIPHEVG 140 (502)
Q Consensus 71 ~v~~L~L~~~~-l~g-~l~~~~~~~l~~L~~L~Ls~N~l~g~----~p~~l~~l~~L~~L~Ls~N~l~~----~~p~~l~ 140 (502)
+++.|+|+++. ++. .++. ....+++|++|+|++|.+++. ++..+.++++|++|++++|.+++ .++..+.
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~-~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~ 217 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLS-IVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR 217 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHH-HHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHH-HHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHh
Confidence 48999998876 221 1211 134789999999999998766 44456788999999999999983 3445567
Q ss_pred CCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCccc---ccCCcCCCCCCCCCeEEcccccccccCCccCcCCccC
Q 010736 141 LMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLN---GSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSI 217 (502)
Q Consensus 141 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 217 (502)
++++|++|++++|.+.+ +|..+..+++|++|+++..... +..+..+..+++|+.|+++++.. +.+|..+..+++|
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L 295 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQI 295 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGC
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCC
Confidence 88999999999999985 6788899999999999864333 34445678889999999988643 4567778889999
Q ss_pred CccccccccccCccc-ccccCCCCCcEEEeeCccccccCCCCC-cc-ccccEEECc-----------CCcCcccC-Cccc
Q 010736 218 SILSLAINQFSGPIP-LSLGNLTNLKQFSLVYNNLYGSIPPSL-DN-LVLTKLSLD-----------DNHFTSYL-PQNI 282 (502)
Q Consensus 218 ~~L~ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~-~~L~~L~ls-----------~N~l~~~~-~~~~ 282 (502)
++|++++|.+++... ..+..+++|+.|+++ +.+.......+ .. ..|++|+++ .|.++... +...
T Consensus 296 ~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~ 374 (592)
T 3ogk_B 296 RKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALA 374 (592)
T ss_dssp CEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHH
T ss_pred cEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHH
Confidence 999999999765433 335677788888877 33322111111 11 345556655 23443221 1111
Q ss_pred cCCCCCcEEEccCCccccccCcc----------------------------------cccCCCCcEEeCCCCc--ccccc
Q 010736 283 CRGGALQIFTVSENRFQGTIPKS----------------------------------LRNCTSLIRVRLDGNN--LTGNI 326 (502)
Q Consensus 283 ~~~~~L~~L~ls~n~l~~~~~~~----------------------------------l~~l~~L~~L~l~~N~--l~~~~ 326 (502)
..+++|+.|+++.|.+++..+.. +.++++|++|+++++. +++..
T Consensus 375 ~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~ 454 (592)
T 3ogk_B 375 QGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLG 454 (592)
T ss_dssp HHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHH
T ss_pred hhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHH
Confidence 22344444444444444333322 3445555555554322 33322
Q ss_pred CcccC-CCCCCcEEEccCcccccc-cCccccCCCCCCeeeecCCccccccCc
Q 010736 327 SKAFG-IYPNLTFIDLSRNNFYGE-ISSNFGECPKLGALNISRNNITGDFGI 376 (502)
Q Consensus 327 ~~~~~-~l~~L~~L~Ls~N~l~~~-~~~~~~~~~~L~~L~l~~N~l~~dfGl 376 (502)
...+. .+++|++|++++|++++. ++..+..+++|++|++++|++ +|-|+
T Consensus 455 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l-~~~~~ 505 (592)
T 3ogk_B 455 LSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCF-SERAI 505 (592)
T ss_dssp HHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCC-BHHHH
T ss_pred HHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCC-cHHHH
Confidence 22222 367777777777777652 333446677888888888875 44333
No 101
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=3.7e-20 Score=170.83 Aligned_cols=156 Identities=22% Similarity=0.293 Sum_probs=125.6
Q ss_pred CccceeeeCCCCCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcc
Q 010736 59 CAWSGISCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHE 138 (502)
Q Consensus 59 C~W~Gv~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 138 (502)
|.|..|.|. +++++ .+|.. +. ++|+.|+|++|+|++..+..|.++++|++|+|++|++++..|..
T Consensus 11 C~~~~v~c~-----------~~~l~-~iP~~-l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~ 75 (220)
T 2v9t_B 11 CSNNIVDCR-----------GKGLT-EIPTN-LP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDA 75 (220)
T ss_dssp EETTEEECT-----------TSCCS-SCCSS-CC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTT
T ss_pred ECCCEEEcC-----------CCCcC-cCCCc-cC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHH
Confidence 466666665 34444 34443 32 68899999999999888888999999999999999999888889
Q ss_pred cCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCC
Q 010736 139 VGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSIS 218 (502)
Q Consensus 139 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 218 (502)
|.++++|++|+|++|+++...+..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|+
T Consensus 76 ~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 155 (220)
T 2v9t_B 76 FQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQ 155 (220)
T ss_dssp TTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred hhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCC
Confidence 99999999999999999866666678888899999999988888888888888888888888888877777777777788
Q ss_pred ccccccccccC
Q 010736 219 ILSLAINQFSG 229 (502)
Q Consensus 219 ~L~ls~N~l~~ 229 (502)
.|++++|.+..
T Consensus 156 ~L~L~~N~~~c 166 (220)
T 2v9t_B 156 TMHLAQNPFIC 166 (220)
T ss_dssp EEECCSSCEEC
T ss_pred EEEeCCCCcCC
Confidence 88888777764
No 102
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=4.7e-20 Score=170.13 Aligned_cols=153 Identities=19% Similarity=0.273 Sum_probs=139.6
Q ss_pred CEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccC
Q 010736 98 AYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSN 177 (502)
Q Consensus 98 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 177 (502)
+.+++++++++ .+|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 46889999998 5676664 78999999999999888889999999999999999999988999999999999999999
Q ss_pred cccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccc
Q 010736 178 NLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYG 253 (502)
Q Consensus 178 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 253 (502)
+++...+..|..+++|++|+|++|++++..|..|..+++|+.|++++|++++..+..|..+++|+.|++++|.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 9997766778999999999999999999989999999999999999999998888889999999999999999864
No 103
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=3.5e-20 Score=170.97 Aligned_cols=154 Identities=21% Similarity=0.216 Sum_probs=123.9
Q ss_pred EEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCC-ccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccC
Q 010736 74 NISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIP-PQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDS 152 (502)
Q Consensus 74 ~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 152 (502)
.+++++++++ .+|.. + ...+++|+|++|++++..| ..|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 15 ~l~~s~n~l~-~iP~~-~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEH-I--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCS-SCCSC-C--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCcc-cCccC-C--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 4555566665 35543 3 2456899999999987755 4578899999999999999887777888999999999999
Q ss_pred CcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcc
Q 010736 153 NQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPI 231 (502)
Q Consensus 153 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 231 (502)
|++++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.|++++|.+++..
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 9998877777888888889998888888888888888888888888888888877888888888888888888777543
No 104
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=3.5e-20 Score=170.95 Aligned_cols=148 Identities=19% Similarity=0.247 Sum_probs=137.0
Q ss_pred CccceeeeCCC----------CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccC
Q 010736 59 CAWSGISCNDA----------GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGG 128 (502)
Q Consensus 59 C~W~Gv~C~~~----------~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~ 128 (502)
|.|..+.|+.. ..++.|+|++|++++..+...|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 68999999742 24789999999999887766689999999999999999998888999999999999999
Q ss_pred CcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEccccccccc
Q 010736 129 NQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGF 206 (502)
Q Consensus 129 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 206 (502)
|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|++++|.+.+.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 999988888899999999999999999999999999999999999999999998899999999999999999999864
No 105
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=3.3e-20 Score=184.56 Aligned_cols=175 Identities=23% Similarity=0.222 Sum_probs=141.6
Q ss_pred EEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCc-CCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccC
Q 010736 74 NISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQIS-NLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDS 152 (502)
Q Consensus 74 ~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 152 (502)
.+++++++++. +|.. +. +.++.|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 22 ~l~c~~~~l~~-iP~~-~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQS-LP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EEECCSSCCSS-CCSS-CC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EEEeCCCCcCc-cCcc-CC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 35666666663 5543 32 4689999999999988888887 999999999999999988888899999999999999
Q ss_pred CcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccC---cCCccCCccccccccccC
Q 010736 153 NQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDI---GNLKSISILSLAINQFSG 229 (502)
Q Consensus 153 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~ls~N~l~~ 229 (502)
|++++..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..+..| ..+++|+.|++++|++++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99998777789999999999999999998888889999999999999999987555555 567888888888888886
Q ss_pred cccccccCCCC--CcEEEeeCcccc
Q 010736 230 PIPLSLGNLTN--LKQFSLVYNNLY 252 (502)
Q Consensus 230 ~~p~~~~~l~~--L~~L~l~~N~l~ 252 (502)
..+..+..++. ++.|++++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 65566666665 366777777665
No 106
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=2.1e-19 Score=166.85 Aligned_cols=153 Identities=26% Similarity=0.286 Sum_probs=136.1
Q ss_pred CEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccC
Q 010736 98 AYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSN 177 (502)
Q Consensus 98 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 177 (502)
+.++.+++.++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+++...+..|..+++|+.|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 56788888887 6676554 89999999999999988999999999999999999998766677899999999999999
Q ss_pred cccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCcccccc
Q 010736 178 NLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGS 254 (502)
Q Consensus 178 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 254 (502)
++++..+..|..+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+..+..+++|+.|++++|.+.+.
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 999877777899999999999999999 6788889999999999999999987777888999999999999988754
No 107
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=1.1e-19 Score=180.80 Aligned_cols=175 Identities=20% Similarity=0.193 Sum_probs=143.2
Q ss_pred CEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccC-CCCCCcEEEccCCcCcccCCcccCCCCCCcEEEccc
Q 010736 98 AYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVG-LMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFS 176 (502)
Q Consensus 98 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 176 (502)
+.+++++++++ .+|..+. +.+++|+|++|+|++..+..+. .+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 57999999998 4676654 4689999999999988888887 999999999999999988888899999999999999
Q ss_pred CcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccc---cCCCCCcEEEeeCccccc
Q 010736 177 NNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSL---GNLTNLKQFSLVYNNLYG 253 (502)
Q Consensus 177 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~~ 253 (502)
|++++..+..|..+++|++|+|++|++++..|..|..+++|+.|++++|++++..+..| ..+++|+.|++++|++++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99998878889999999999999999998888999999999999999999997555555 568888888888888874
Q ss_pred cCCCCCcc-c--cccEEECcCCcCc
Q 010736 254 SIPPSLDN-L--VLTKLSLDDNHFT 275 (502)
Q Consensus 254 ~~p~~~~~-~--~L~~L~ls~N~l~ 275 (502)
..+..+.. . .++.|++++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 33222222 1 1355666666654
No 108
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.3e-19 Score=174.59 Aligned_cols=173 Identities=21% Similarity=0.351 Sum_probs=103.1
Q ss_pred CCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCc
Q 010736 91 FSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMV 170 (502)
Q Consensus 91 ~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 170 (502)
+..+++|++|++++|.++.. + .+..+++|++|+|++|++++..| +..+++|++|++++|++++ +| .+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 34556667777777766643 3 36666777777777777764433 6666777777777776664 22 366666666
Q ss_pred EEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCcc
Q 010736 171 ELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNN 250 (502)
Q Consensus 171 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 250 (502)
+|++++|++++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|++++..+ +..+++|+.|++++|.
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 666666666642 3455666666666666666643 345555666666666666554433 5555555555555554
Q ss_pred ccccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCcccc
Q 010736 251 LYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQG 300 (502)
Q Consensus 251 l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~ 300 (502)
++ +. + .+..+++|+.|++++|+++.
T Consensus 190 i~-----------------------~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 190 IS-----------------------DL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CC-----------------------BC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CC-----------------------CC-h-hhccCCCCCEEECcCCcccC
Confidence 43 21 1 25556667777777776653
No 109
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=4e-19 Score=171.16 Aligned_cols=169 Identities=25% Similarity=0.351 Sum_probs=149.3
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEE
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILY 149 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 149 (502)
.+++.|+++++++... + .+..+++|++|+|++|++++..+ +.++++|++|+|++|.+++ +| .+..+++|++|+
T Consensus 46 ~~L~~L~l~~~~i~~~-~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~ 118 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV-Q--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (291)
T ss_dssp HTCCEEECTTSCCCCC-T--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred CcccEEEccCCCcccC-h--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 4688999999998743 3 38899999999999999997655 9999999999999999986 34 499999999999
Q ss_pred ccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccC
Q 010736 150 IDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSG 229 (502)
Q Consensus 150 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 229 (502)
+++|++++. ..+..+++|+.|++++|++++. ..+..+++|++|++++|++++..+ +..+++|+.|++++|++++
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 999999864 4688999999999999999965 568999999999999999997655 8899999999999999986
Q ss_pred cccccccCCCCCcEEEeeCccccc
Q 010736 230 PIPLSLGNLTNLKQFSLVYNNLYG 253 (502)
Q Consensus 230 ~~p~~~~~l~~L~~L~l~~N~l~~ 253 (502)
. + .+..+++|+.|++++|.++.
T Consensus 193 l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 193 L-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp C-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred C-h-hhccCCCCCEEECcCCcccC
Confidence 4 4 48899999999999999874
No 110
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.80 E-value=6e-21 Score=183.84 Aligned_cols=137 Identities=22% Similarity=0.359 Sum_probs=88.3
Q ss_pred CCCeeeecCCcc---------ccccCcccccCCCC--CCcccccccccccCcccccc---ceecccceeeeeceeeeehh
Q 010736 359 KLGALNISRNNI---------TGDFGIAKFLKPDS--SNWTGFAGTYGYIAPELAYT---MKITEKCDVYSFGVLVLEVI 424 (502)
Q Consensus 359 ~L~~L~l~~N~l---------~~dfGl~~ll~~~~--~~~~~~~gt~gy~aPE~~~~---~~~s~k~Dvysfgv~llEll 424 (502)
++.|.||+..|| ++|||+++...... ...+...||+.|+|||.... ..++.|+|||||||++|||+
T Consensus 152 ~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Ell 231 (307)
T 3omv_A 152 NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELM 231 (307)
T ss_dssp TCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHH
T ss_pred CccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHH
Confidence 445555555444 79999999875432 22345789999999999853 46899999999999999999
Q ss_pred cCCCCCCcccCCCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcCCC
Q 010736 425 KGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAPSL 501 (502)
Q Consensus 425 tg~~p~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~~~ 501 (502)
||+.|+...... .............|.+........+++.+++. .||+.+|++||+|+||++.|+.++.++
T Consensus 232 tg~~Pf~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~---~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 232 TGELPYSHINNR---DQIIFMVGRGYASPDLSKLYKNCPKAMKRLVA---DCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp HSSCTTTTCCCH---HHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHH---HHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred HCCCCCCCCChH---HHHHHHHhcCCCCCCcccccccchHHHHHHHH---HHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 999998532110 00000011122333332211222345555555 999999999999999999999887665
No 111
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=3.1e-19 Score=188.41 Aligned_cols=186 Identities=22% Similarity=0.320 Sum_probs=124.6
Q ss_pred EEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCc
Q 010736 75 ISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQ 154 (502)
Q Consensus 75 L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 154 (502)
+.+..+.+.+.++ +..+++|+.|++++|.+.. +| .+..+++|+.|+|++|.|++..| +..+++|+.|+|++|+
T Consensus 26 l~l~~~~i~~~~~---~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 98 (605)
T 1m9s_A 26 DNLKKKSVTDAVT---QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENK 98 (605)
T ss_dssp HHTTCSCTTSEEC---HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred HhccCCCcccccc---hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCC
Confidence 3444444444332 4567778888888888774 33 47788888888888888876544 7778888888888888
Q ss_pred CcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCccccc
Q 010736 155 LDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLS 234 (502)
Q Consensus 155 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 234 (502)
+++ +| .+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++..|
T Consensus 99 l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-- 170 (605)
T 1m9s_A 99 IKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 170 (605)
T ss_dssp CCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--
T ss_pred CCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--
Confidence 874 33 677788888888888887753 3467777888888888877764 456777777777777777776555
Q ss_pred ccCCCCCcEEEeeCccccccCCCCCccccccEEECcCCcCcc
Q 010736 235 LGNLTNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFTS 276 (502)
Q Consensus 235 ~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~~ 276 (502)
+..+++|+.|+|++|.+++. |.......|+.|++++|++.+
T Consensus 171 l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 171 LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEEC
T ss_pred hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcC
Confidence 66777777777777766632 221111345555555554443
No 112
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=3e-19 Score=188.55 Aligned_cols=171 Identities=25% Similarity=0.351 Sum_probs=150.7
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEE
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILY 149 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 149 (502)
..++.|+++++++.. ++ .+..+++|+.|+|++|.+++..| +..+++|+.|+|++|.+++ +| .+..+++|+.|+
T Consensus 43 ~~L~~L~l~~n~i~~-l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 43 NSIDQIIANNSDIKS-VQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp TTCCCCBCTTCCCCC-CT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred CCCCEEECcCCCCCC-Ch--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 468889999999874 44 38999999999999999997655 8999999999999999985 44 789999999999
Q ss_pred ccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccC
Q 010736 150 IDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSG 229 (502)
Q Consensus 150 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 229 (502)
|++|++++. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++
T Consensus 116 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 116 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp CTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred ecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC
Confidence 999999863 4688999999999999999965 568999999999999999998766 8899999999999999996
Q ss_pred cccccccCCCCCcEEEeeCccccccC
Q 010736 230 PIPLSLGNLTNLKQFSLVYNNLYGSI 255 (502)
Q Consensus 230 ~~p~~~~~l~~L~~L~l~~N~l~~~~ 255 (502)
. | .+..+++|+.|++++|.+.+..
T Consensus 190 l-~-~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 190 L-R-ALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp C-G-GGTTCTTCSEEECCSEEEECCC
T ss_pred C-h-HHccCCCCCEEEccCCcCcCCc
Confidence 4 3 6889999999999999998643
No 113
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.79 E-value=3.2e-19 Score=161.59 Aligned_cols=153 Identities=14% Similarity=0.210 Sum_probs=98.2
Q ss_pred CCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcE
Q 010736 92 SSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVE 171 (502)
Q Consensus 92 ~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 171 (502)
..+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44556667777777666 444 4666677777777777554 2235666677777777777776666666667777777
Q ss_pred EEcccCcccccCCcCCCCCCCCCeEEccccc-ccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCcc
Q 010736 172 LALFSNNLNGSVPHSLGNLTQISMLFLHDNS-FSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNN 250 (502)
Q Consensus 172 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 250 (502)
|++++|++++..|..+..+++|++|++++|+ ++ .+| .+..+++|+.|++++|++++ ++ .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 7777777766566666667777777777776 43 333 46666777777777777764 22 56667777777777776
Q ss_pred cc
Q 010736 251 LY 252 (502)
Q Consensus 251 l~ 252 (502)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 64
No 114
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.77 E-value=1.8e-21 Score=206.68 Aligned_cols=303 Identities=16% Similarity=0.147 Sum_probs=157.2
Q ss_pred CCEEEEEecCCCCceecCcccCC-CCCCCCEEECCCC-ccccc-CCccCcCCCCCCEEEccCCcCcCCCCccc----CCC
Q 010736 70 GRVINISLRGVGLKGKLHAFSFS-SFPHLAYLDLRDN-KLFGT-IPPQISNLTNLSILSLGGNQFSGNIPHEV----GLM 142 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~-~l~~L~~L~Ls~N-~l~g~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l----~~l 142 (502)
.+++.|+|+++.+++..... +. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..+
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~-l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLEL-IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHH-HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCeEEeeCcEEcHHHHHH-HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 46888889888887655443 43 5788888888888 45432 44445578888888888888776544433 356
Q ss_pred CCCcEEEccCCc--Cccc-CCcccCCCCCCcEEEcccC-cccccCCcCCCCCCCCCeEEccccc----------------
Q 010736 143 SHLKILYIDSNQ--LDGS-IPLEVGQLSSMVELALFSN-NLNGSVPHSLGNLTQISMLFLHDNS---------------- 202 (502)
Q Consensus 143 ~~L~~L~Ls~N~--l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~---------------- 202 (502)
++|++|++++|. ++.. ++..+..+++|+.|++++| .+.+ +|..+..+++|+.|+++.+.
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~ 262 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALS 262 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHH
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHh
Confidence 688888888876 2211 1111234577788887776 2222 33333334444444432221
Q ss_pred ----------cc----ccCCccCcCCccCCccccccccccCcc-cccccCCCCCcEEEeeCc------------------
Q 010736 203 ----------FS----GFIPPDIGNLKSISILSLAINQFSGPI-PLSLGNLTNLKQFSLVYN------------------ 249 (502)
Q Consensus 203 ----------l~----~~~p~~~~~l~~L~~L~ls~N~l~~~~-p~~~~~l~~L~~L~l~~N------------------ 249 (502)
+. +.++..+..+++|+.|++++|.+++.. +..+..+++|+.|++++|
T Consensus 263 ~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp TCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCE
T ss_pred cCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCccCHHHHHHHHHhCCCCCE
Confidence 00 011111223445555555555543221 111234444444444444
Q ss_pred ---------------cccccCCCCCc--cccccEEECcCCcCcccCCcccc-CCCCCcEEEcc--C----Cccccc----
Q 010736 250 ---------------NLYGSIPPSLD--NLVLTKLSLDDNHFTSYLPQNIC-RGGALQIFTVS--E----NRFQGT---- 301 (502)
Q Consensus 250 ---------------~l~~~~p~~~~--~~~L~~L~ls~N~l~~~~~~~~~-~~~~L~~L~ls--~----n~l~~~---- 301 (502)
.+++.....+. ...|+.|.+..|.+++.....+. .+++|+.|+++ + +.+++.
T Consensus 343 L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~ 422 (594)
T 2p1m_B 343 LRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDI 422 (594)
T ss_dssp EEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHH
T ss_pred EEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhh
Confidence 12111000000 13455555555555443333332 35666666666 2 344311
Q ss_pred -cCcccccCCCCcEEeCCCCccccccCcccCC-CCCCcEEEccCcccccccCccc-cCCCCCCeeeecCCccccccCc
Q 010736 302 -IPKSLRNCTSLIRVRLDGNNLTGNISKAFGI-YPNLTFIDLSRNNFYGEISSNF-GECPKLGALNISRNNITGDFGI 376 (502)
Q Consensus 302 -~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~~~~L~~L~l~~N~l~~dfGl 376 (502)
++..+..+++|+.|++++ .+++.....+.. +++|+.|+|++|.+++.....+ ..+++|++|++++|++ ++-|+
T Consensus 423 ~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~-~~~~~ 498 (594)
T 2p1m_B 423 GFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF-GDKAL 498 (594)
T ss_dssp HHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC-CHHHH
T ss_pred HHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC-cHHHH
Confidence 112244556666666655 444433333333 5677777777777655444333 4567777777777776 44444
No 115
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.77 E-value=4.6e-20 Score=178.31 Aligned_cols=128 Identities=20% Similarity=0.299 Sum_probs=88.3
Q ss_pred CCCeeeecCCcc---------ccccCcccccCCCC--CCcccccccccccCccccccceecccceeeeeceeeeehhc-C
Q 010736 359 KLGALNISRNNI---------TGDFGIAKFLKPDS--SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426 (502)
Q Consensus 359 ~L~~L~l~~N~l---------~~dfGl~~ll~~~~--~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g 426 (502)
++.|.||+..|+ ++|||+++.+.... ...+...||+.|+|||...+..++.|+|||||||++|||+| |
T Consensus 165 ~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g 244 (308)
T 4gt4_A 165 HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG 244 (308)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCC
Confidence 344555555443 79999999875422 22345679999999999999999999999999999999999 8
Q ss_pred CCCCCcccCCCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 427 KHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 427 ~~p~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
+.|+...... . ....+.+...+..+....+++.+++. .||+.+|++||+|+||+++|++.
T Consensus 245 ~~Pf~~~~~~---~-----~~~~i~~~~~~~~p~~~~~~~~~li~---~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 245 LQPYCGYSNQ---D-----VVEMIRNRQVLPCPDDCPAWVYALMI---ECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp CCTTTTCCHH---H-----HHHHHHTTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCCCCCCHH---H-----HHHHHHcCCCCCCcccchHHHHHHHH---HHcCCChhHCcCHHHHHHHHHhc
Confidence 9997532110 0 01111111111111122345555544 99999999999999999999864
No 116
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=1.5e-18 Score=157.17 Aligned_cols=152 Identities=17% Similarity=0.232 Sum_probs=132.6
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEE
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILY 149 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 149 (502)
.+++.++++++++. .++ .+..+++|++|++++|.++ .++.+..+++|++|++++|.+++..|..++.+++|++|+
T Consensus 44 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT--GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HTCCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred CCccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 46889999999998 566 3899999999999999775 345799999999999999999988889999999999999
Q ss_pred ccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccC
Q 010736 150 IDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSG 229 (502)
Q Consensus 150 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 229 (502)
+++|++++..|..+..+++|++|++++|++.+.+| .+..+++|++|++++|++++. + .+..+++|+.|++++|++.+
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC----
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcccCC
Confidence 99999998888999999999999999998333566 689999999999999999974 3 78899999999999999864
No 117
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=5.9e-18 Score=152.56 Aligned_cols=129 Identities=26% Similarity=0.308 Sum_probs=105.2
Q ss_pred EEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCc-cCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCC
Q 010736 75 ISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPP-QISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSN 153 (502)
Q Consensus 75 L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~-~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 153 (502)
+++++++++ .+|.. +. .+|++|+|++|++++..+. .|+++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 13 l~~s~~~l~-~ip~~-~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 13 VDCTGRGLK-EIPRD-IP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EECTTSCCS-SCCSC-CC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEcCCCCcC-cCccC-CC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 444455553 56653 33 3889999999999877664 4888999999999999999888888999999999999999
Q ss_pred cCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccC
Q 010736 154 QLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFI 207 (502)
Q Consensus 154 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 207 (502)
++++..+..|..+++|++|++++|++++..|..+..+++|++|++++|.+++..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 999888888888899999999999998888888888888888888888887643
No 118
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=1.7e-21 Score=204.50 Aligned_cols=120 Identities=24% Similarity=0.361 Sum_probs=68.2
Q ss_pred CCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCCcEEEccC
Q 010736 217 ISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSE 295 (502)
Q Consensus 217 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~ 295 (502)
|+.|++++|++++ +|. ++.+++|+.|++++|.++ .+|..+.. ..|+.|++++|++++ +| .+..+++|+.|++++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 4444444444443 333 444444444444444444 34443333 345555555555554 34 566667777777777
Q ss_pred Ccccccc-CcccccCCCCcEEeCCCCccccccCcc---cCCCCCCcEEEc
Q 010736 296 NRFQGTI-PKSLRNCTSLIRVRLDGNNLTGNISKA---FGIYPNLTFIDL 341 (502)
Q Consensus 296 n~l~~~~-~~~l~~l~~L~~L~l~~N~l~~~~~~~---~~~l~~L~~L~L 341 (502)
|++++.. |..+..+++|+.|++++|.+++.++.. +..+|+|+.|++
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 7777665 777777777777777777777654422 223677777754
No 119
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=1.4e-19 Score=195.67 Aligned_cols=217 Identities=18% Similarity=0.175 Sum_probs=123.9
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCEE-----EccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCC
Q 010736 95 PHLAYLDLRDNKLFGTIPPQISNLTNLSIL-----SLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSM 169 (502)
Q Consensus 95 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L-----~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 169 (502)
+.++.|+|.+|.+.. +|..+.....|+.+ +++.|.+. ..|..+..+++|+.|+|++|++. .+|..+..+++|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 568899999999885 34433333333322 23334444 45778999999999999999998 788888899999
Q ss_pred cEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCc
Q 010736 170 VELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYN 249 (502)
Q Consensus 170 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N 249 (502)
++|+|++|.|+ .+|..|+.+++|++|+|++|+|+ .+|..|+.+++|++|+|++|.|+ .+|..|+++++|+.|+|++|
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGN 326 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTS
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCC
Confidence 99999999999 88999999999999999999999 77999999999999999999997 67888999999999999999
Q ss_pred cccccCCCCCccc--cccEEECcCCcCcccCCccccCCCCCcEEEccCC--------ccccccCcccccCCCCcEEeCCC
Q 010736 250 NLYGSIPPSLDNL--VLTKLSLDDNHFTSYLPQNICRGGALQIFTVSEN--------RFQGTIPKSLRNCTSLIRVRLDG 319 (502)
Q Consensus 250 ~l~~~~p~~~~~~--~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n--------~l~~~~~~~l~~l~~L~~L~l~~ 319 (502)
.+++.+|..+... ....+++++|.+++.+|.. |..|+++.| .+.+..+..+..+..+....+++
T Consensus 327 ~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~ 400 (727)
T 4b8c_D 327 PLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSY 400 (727)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----------------------------------------------
T ss_pred ccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhcccccceeeeec
Confidence 9998888776542 2334678999998887764 455566655 22333333344455555556666
Q ss_pred Cccc
Q 010736 320 NNLT 323 (502)
Q Consensus 320 N~l~ 323 (502)
|-+.
T Consensus 401 Nil~ 404 (727)
T 4b8c_D 401 NTLC 404 (727)
T ss_dssp -CCC
T ss_pred cccc
Confidence 6554
No 120
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.75 E-value=6.9e-21 Score=202.20 Aligned_cols=305 Identities=12% Similarity=0.078 Sum_probs=191.8
Q ss_pred CCEEEEEecCC-CCcee-cCcccCCCCCCCCEEECCCCcccccCCccC----cCCCCCCEEEccCCc--CcCC-CCcccC
Q 010736 70 GRVINISLRGV-GLKGK-LHAFSFSSFPHLAYLDLRDNKLFGTIPPQI----SNLTNLSILSLGGNQ--FSGN-IPHEVG 140 (502)
Q Consensus 70 ~~v~~L~L~~~-~l~g~-l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l----~~l~~L~~L~Ls~N~--l~~~-~p~~l~ 140 (502)
.+++.|+|+++ .++.. ++. .+..+++|++|+|++|.+++..+..+ ..+++|++|++++|. ++.. ++..+.
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~-~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~ 208 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAA-IAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVT 208 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHH-HHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHH-HHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHH
Confidence 46888999888 44432 332 24578999999999999876554443 367799999999887 2211 111224
Q ss_pred CCCCCcEEEccCC-cCcccCCcccCC------------------------------------------------------
Q 010736 141 LMSHLKILYIDSN-QLDGSIPLEVGQ------------------------------------------------------ 165 (502)
Q Consensus 141 ~l~~L~~L~Ls~N-~l~~~~p~~~~~------------------------------------------------------ 165 (502)
.+++|++|++++| .+++ +|..+..
T Consensus 209 ~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~ 287 (594)
T 2p1m_B 209 RCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSV 287 (594)
T ss_dssp HCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHH
T ss_pred hCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHh
Confidence 4688888888887 2221 3333333
Q ss_pred CCCCcEEEcccCcccccCC-cCCCCCCCCCeEEccccccccc-CCccCcCCccCCccccc---------cccccCccccc
Q 010736 166 LSSMVELALFSNNLNGSVP-HSLGNLTQISMLFLHDNSFSGF-IPPDIGNLKSISILSLA---------INQFSGPIPLS 234 (502)
Q Consensus 166 l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~ls---------~N~l~~~~p~~ 234 (502)
+++|++|++++|.+++... ..+..+++|++|++++| ++.. ++.....+++|+.|+++ .+.+++.....
T Consensus 288 ~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~ 366 (594)
T 2p1m_B 288 CSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVS 366 (594)
T ss_dssp HTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHH
T ss_pred hCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHH
Confidence 3455555555555432211 11234455555555555 2211 11112235666666662 23443322222
Q ss_pred c-cCCCCCcEEEeeCccccccCCCCCcc--ccccEEECc--C----CcCccc-----CCccccCCCCCcEEEccCCcccc
Q 010736 235 L-GNLTNLKQFSLVYNNLYGSIPPSLDN--LVLTKLSLD--D----NHFTSY-----LPQNICRGGALQIFTVSENRFQG 300 (502)
Q Consensus 235 ~-~~l~~L~~L~l~~N~l~~~~p~~~~~--~~L~~L~ls--~----N~l~~~-----~~~~~~~~~~L~~L~ls~n~l~~ 300 (502)
+ ..+++|+.|.+..|.+++..+..+.. ..|+.|+++ + +.++.. ++..+..+++|+.|++++ .+++
T Consensus 367 l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~ 445 (594)
T 2p1m_B 367 VSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTD 445 (594)
T ss_dssp HHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCH
T ss_pred HHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccH
Confidence 2 24788999988888887654443332 679999998 4 566532 122256678999999987 6666
Q ss_pred ccCccccc-CCCCcEEeCCCCccccccCccc-CCCCCCcEEEccCcccccccCc-cccCCCCCCeeeecCCccccccCcc
Q 010736 301 TIPKSLRN-CTSLIRVRLDGNNLTGNISKAF-GIYPNLTFIDLSRNNFYGEISS-NFGECPKLGALNISRNNITGDFGIA 377 (502)
Q Consensus 301 ~~~~~l~~-l~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~~L~~L~l~~N~l~~dfGl~ 377 (502)
.....+.. +++|+.|++++|.+++.....+ ..+++|+.|+|++|.+++.... ....+++|++|++++|++ .+-|+.
T Consensus 446 ~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~-~~~~~~ 524 (594)
T 2p1m_B 446 KVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV-SFGACK 524 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC-BHHHHH
T ss_pred HHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC-CHHHHH
Confidence 55555555 8999999999999976654444 5689999999999999654443 345689999999999998 455554
Q ss_pred cc
Q 010736 378 KF 379 (502)
Q Consensus 378 ~l 379 (502)
.+
T Consensus 525 ~l 526 (594)
T 2p1m_B 525 LL 526 (594)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 121
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=2.9e-18 Score=162.60 Aligned_cols=167 Identities=19% Similarity=0.256 Sum_probs=124.9
Q ss_pred EEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEcc
Q 010736 72 VINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYID 151 (502)
Q Consensus 72 v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 151 (502)
++.++++++++++.. .+..+++|++|++++|+++. +| .+..+++|++|+|++|++++..| +..+++|++|+++
T Consensus 21 l~~l~l~~~~i~~~~---~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV---SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHTCSCTTSEE---CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECC
T ss_pred HHHHHhcCCCccccc---chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECC
Confidence 334455566665432 26777888888888888874 45 67888888888888888885444 8888888888888
Q ss_pred CCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcc
Q 010736 152 SNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPI 231 (502)
Q Consensus 152 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 231 (502)
+|++++ +|.. .. ++|+.|++++|++++. + .+..+++|++|++++|++++. + .+..+++|+.|++++|++++.
T Consensus 94 ~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 94 RNRLKN-LNGI-PS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp SSCCSC-CTTC-CC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-
T ss_pred CCccCC-cCcc-cc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-
Confidence 888875 3332 22 7888888888888853 3 477888888888888888865 3 577788888888888888865
Q ss_pred cccccCCCCCcEEEeeCcccccc
Q 010736 232 PLSLGNLTNLKQFSLVYNNLYGS 254 (502)
Q Consensus 232 p~~~~~l~~L~~L~l~~N~l~~~ 254 (502)
..+..+++|+.|++++|.+++.
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHhccCCCCCEEeCCCCcccCC
Confidence 5677788888888888887744
No 122
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.75 E-value=9.7e-20 Score=177.71 Aligned_cols=129 Identities=25% Similarity=0.383 Sum_probs=82.1
Q ss_pred CCCeeeecCCcc---------ccccCcccccCCCCC--CcccccccccccCccccccceecccceeeeeceeeeehhc-C
Q 010736 359 KLGALNISRNNI---------TGDFGIAKFLKPDSS--NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426 (502)
Q Consensus 359 ~L~~L~l~~N~l---------~~dfGl~~ll~~~~~--~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g 426 (502)
++.|.||+..|+ ++|||+++.+..... ..+...||+.|+|||...+..++.++|||||||++|||+| |
T Consensus 178 ~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G 257 (329)
T 4aoj_A 178 HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYG 257 (329)
T ss_dssp TCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCC
Confidence 455556655444 799999998754322 2335679999999999999999999999999999999999 8
Q ss_pred CCCCCcccCCCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 427 KHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 427 ~~p~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
+.|+...... .... .+.+-..+..+ ....+++.++++ .||+.+|++||+|+||+++|+.+.
T Consensus 258 ~~Pf~~~~~~---~~~~--~i~~g~~~~~p---~~~~~~~~~li~---~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 258 KQPWYQLSNT---EAID--CITQGRELERP---RACPPEVYAIMR---GCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp CCTTCSSCHH---HHHH--HHHHTCCCCCC---TTCCHHHHHHHH---HHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCHH---HHHH--HHHcCCCCCCc---ccccHHHHHHHH---HHcCcChhHCcCHHHHHHHHHHHh
Confidence 9997532110 0000 01111111222 122345555555 999999999999999999999874
No 123
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.75 E-value=1.8e-19 Score=174.35 Aligned_cols=128 Identities=20% Similarity=0.263 Sum_probs=83.7
Q ss_pred cccccCcccccCCCCC----CcccccccccccCccccccc------eecccceeeeeceeeeehhcCCCCCCcccCCCCC
Q 010736 370 ITGDFGIAKFLKPDSS----NWTGFAGTYGYIAPELAYTM------KITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSP 439 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~----~~~~~~gt~gy~aPE~~~~~------~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~ 439 (502)
.++|||+++....... ......||+.|+|||+..+. .++.|+|||||||++|||+||+.|+........+
T Consensus 148 Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p 227 (303)
T 3hmm_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp EECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCT
T ss_pred EEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccccc
Confidence 3799999998754332 12245799999999998653 5788999999999999999999886532221111
Q ss_pred --CCCc-c----c----ccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 440 --SLNT-D----I----ALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 440 --~~~~-~----~----~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
.+.. . . ...+..+|.++... ...+....+.+++..||+.+|++||||.||+++|+.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 228 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG-GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred chhcccccchHHHHHHHHhcccCCCCCCccc-cchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 1000 0 0 01223344443211 11234445566777999999999999999999999874
No 124
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=1.4e-17 Score=150.09 Aligned_cols=132 Identities=28% Similarity=0.309 Sum_probs=118.0
Q ss_pred CEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCc-ccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEccc
Q 010736 98 AYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPH-EVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFS 176 (502)
Q Consensus 98 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 176 (502)
+++++++|+++ .+|..+.. +|++|+|++|+|++..+. .|+.+++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 68999999996 67776654 899999999999977664 488999999999999999988899999999999999999
Q ss_pred CcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCccc
Q 010736 177 NNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIP 232 (502)
Q Consensus 177 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 232 (502)
|++++..|..|..+++|++|+|++|++++..|..+..+++|++|++++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99998888889999999999999999999999999999999999999999987654
No 125
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=1.3e-20 Score=197.83 Aligned_cols=202 Identities=15% Similarity=0.167 Sum_probs=120.0
Q ss_pred CCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCc-------------ccccCCcCCCCCCCCCeEE-ccccccccc
Q 010736 141 LMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNN-------------LNGSVPHSLGNLTQISMLF-LHDNSFSGF 206 (502)
Q Consensus 141 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~~ 206 (502)
.+++|+.|+|++|+++ .+|..++.+++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~--- 422 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL--- 422 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH---
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc---
Confidence 3444444445544443 344444444444444443332 2334444444445555444 333322
Q ss_pred CCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCC
Q 010736 207 IPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRG 285 (502)
Q Consensus 207 ~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~ 285 (502)
..|..+.+++|.++...+ ..|+.|++++|.+++ +|. +.. ..|+.|++++|+++ .+|..++.+
T Consensus 423 --------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 423 --------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp --------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred --------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcC
Confidence 233444455555543221 236777888887774 554 444 56777777777777 466777777
Q ss_pred CCCcEEEccCCccccccCcccccCCCCcEEeCCCCcccccc-CcccCCCCCCcEEEccCcccccccCcc---ccCCCCCC
Q 010736 286 GALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNI-SKAFGIYPNLTFIDLSRNNFYGEISSN---FGECPKLG 361 (502)
Q Consensus 286 ~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~---~~~~~~L~ 361 (502)
++|+.|++++|++++ +| .+..+++|+.|+|++|++++.. |..+..+++|+.|+|++|.+++.++.. +..+++|+
T Consensus 486 ~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~ 563 (567)
T 1dce_A 486 RCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVS 563 (567)
T ss_dssp TTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCS
T ss_pred CCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccC
Confidence 777777777777775 45 6777777777777777777665 777777777777777777777654432 23367777
Q ss_pred eeee
Q 010736 362 ALNI 365 (502)
Q Consensus 362 ~L~l 365 (502)
.||+
T Consensus 564 ~L~l 567 (567)
T 1dce_A 564 SILT 567 (567)
T ss_dssp EEEC
T ss_pred ccCC
Confidence 7653
No 126
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.73 E-value=7.6e-20 Score=176.02 Aligned_cols=129 Identities=22% Similarity=0.342 Sum_probs=88.5
Q ss_pred CCCeeeecCCcc---------ccccCcccccCCCCCC--cccccccccccCccccccceecccceeeeeceeeeehhc-C
Q 010736 359 KLGALNISRNNI---------TGDFGIAKFLKPDSSN--WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426 (502)
Q Consensus 359 ~L~~L~l~~N~l---------~~dfGl~~ll~~~~~~--~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g 426 (502)
++.|.||+..|+ ++|||+++........ .....||+.|+|||...+..++.|+|||||||++|||+| |
T Consensus 148 ~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G 227 (299)
T 4asz_A 148 HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYG 227 (299)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred CcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCC
Confidence 445555554443 7999999987543221 223568999999999999999999999999999999999 8
Q ss_pred CCCCCcccCCCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 427 KHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 427 ~~p~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
+.|+...... . ....+.....+..+....+++.+++. .||+.+|++||+|+||++.|+.+.
T Consensus 228 ~~Pf~~~~~~---~-----~~~~i~~~~~~~~p~~~~~~~~~li~---~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 228 KQPWYQLSNN---E-----VIECITQGRVLQRPRTCPQEVYELML---GCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp CCTTTTSCHH---H-----HHHHHHHTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCHH---H-----HHHHHHcCCCCCCCccchHHHHHHHH---HHcCCChhHCcCHHHHHHHHHHHH
Confidence 9997532110 0 01111111111111122345555555 999999999999999999998763
No 127
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=2.5e-18 Score=163.05 Aligned_cols=171 Identities=18% Similarity=0.292 Sum_probs=126.4
Q ss_pred CCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEE
Q 010736 93 SFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVEL 172 (502)
Q Consensus 93 ~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 172 (502)
.+.+++.+++++|.+++.. .+..+++|++|++++|.++ .+| .+..+++|++|++++|++++..+ +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4556777888888888543 5788899999999999988 455 68888999999999999986544 8888999999
Q ss_pred EcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCcccc
Q 010736 173 ALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLY 252 (502)
Q Consensus 173 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 252 (502)
++++|++++ +|. +.. ++|++|++++|++++. ..+..+++|+.|++++|++++. + .+..+++|+.|++++|+++
T Consensus 91 ~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 999998885 443 223 7888888888888764 3477777788888888877754 3 4666677777777666665
Q ss_pred ccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccc
Q 010736 253 GSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGT 301 (502)
Q Consensus 253 ~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~ 301 (502)
+. ..+..+++|+.|++++|.+++.
T Consensus 164 ~~-------------------------~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT-------------------------GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC-------------------------TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch-------------------------HHhccCCCCCEEeCCCCcccCC
Confidence 32 2345566777777777777643
No 128
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.73 E-value=9.7e-18 Score=147.68 Aligned_cols=133 Identities=20% Similarity=0.172 Sum_probs=90.7
Q ss_pred CCCCCEEECCCCccc-ccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEE
Q 010736 94 FPHLAYLDLRDNKLF-GTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVEL 172 (502)
Q Consensus 94 l~~L~~L~Ls~N~l~-g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 172 (502)
.++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 366777777777776 66777777777777777777777754 567777777777777777776666666667777777
Q ss_pred EcccCcccccC-CcCCCCCCCCCeEEcccccccccCC---ccCcCCccCCcccccccccc
Q 010736 173 ALFSNNLNGSV-PHSLGNLTQISMLFLHDNSFSGFIP---PDIGNLKSISILSLAINQFS 228 (502)
Q Consensus 173 ~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~ls~N~l~ 228 (502)
++++|++++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777776432 2456666777777777776665433 34555666666666666554
No 129
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.72 E-value=5.9e-19 Score=173.64 Aligned_cols=129 Identities=26% Similarity=0.349 Sum_probs=88.8
Q ss_pred CCCeeeecCCcc---------ccccCcccccCCCCCC--cccccccccccCccccccceecccceeeeeceeeeehhc-C
Q 010736 359 KLGALNISRNNI---------TGDFGIAKFLKPDSSN--WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-G 426 (502)
Q Consensus 359 ~L~~L~l~~N~l---------~~dfGl~~ll~~~~~~--~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g 426 (502)
++.|.||+..|| +||||++|.+..+... .+...||+.|+|||...+..++.|+|||||||++|||+| |
T Consensus 205 ~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G 284 (353)
T 4ase_A 205 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 284 (353)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred CeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCC
Confidence 345555554443 7999999987554332 234678999999999999999999999999999999999 8
Q ss_pred CCCCCcccCCCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 427 KHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 427 ~~p~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
+.|+....... .+.. .+.+-..+..+ ....+++.+++. .||+.+|++||+|.||++.|+.+
T Consensus 285 ~~Pf~~~~~~~--~~~~--~i~~g~~~~~p---~~~~~~~~~li~---~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 285 ASPYPGVKIDE--EFCR--RLKEGTRMRAP---DYTTPEMYQTML---DCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp CCSSTTCCCSH--HHHH--HHHHTCCCCCC---TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHH--HHHH--HHHcCCCCCCC---ccCCHHHHHHHH---HHcCcChhHCcCHHHHHHHHHHH
Confidence 99985321110 0000 01111112222 122345555555 99999999999999999999875
No 130
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.71 E-value=7.6e-17 Score=143.22 Aligned_cols=135 Identities=27% Similarity=0.357 Sum_probs=109.3
Q ss_pred CCccceeeeCCCCCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCc
Q 010736 58 PCAWSGISCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPH 137 (502)
Q Consensus 58 ~C~W~Gv~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 137 (502)
.|.|.++.|+.. +++ .+|. ...++|++|++++|++++..+..|.++++|++|+|++|++++..+.
T Consensus 6 ~C~~~~l~~~~~-----------~l~-~~p~---~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (177)
T 2o6r_A 6 SCSGTEIRCNSK-----------GLT-SVPT---GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDG 70 (177)
T ss_dssp EEETTEEECCSS-----------CCS-SCCT---TCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EeCCCEEEecCC-----------CCc-cCCC---CCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChh
Confidence 368999888742 222 2332 2236899999999999987777789999999999999999977777
Q ss_pred ccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccC
Q 010736 138 EVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFI 207 (502)
Q Consensus 138 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 207 (502)
.|+.+++|++|++++|++++..+..+..+++|++|++++|++++..+..+..+++|++|++++|.+.+..
T Consensus 71 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 71 VFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred HccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 7889999999999999999777777888999999999999998766666788889999999999887643
No 131
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.71 E-value=9.4e-18 Score=144.64 Aligned_cols=128 Identities=16% Similarity=0.182 Sum_probs=95.5
Q ss_pred CCCCCEEECCCCccc-ccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEE
Q 010736 94 FPHLAYLDLRDNKLF-GTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVEL 172 (502)
Q Consensus 94 l~~L~~L~Ls~N~l~-g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 172 (502)
.++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|++++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467888888888887 67777778888888888888888755 567778888888888888887677777777888888
Q ss_pred EcccCccccc-CCcCCCCCCCCCeEEcccccccccCC---ccCcCCccCCccccc
Q 010736 173 ALFSNNLNGS-VPHSLGNLTQISMLFLHDNSFSGFIP---PDIGNLKSISILSLA 223 (502)
Q Consensus 173 ~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~ls 223 (502)
++++|++++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 8888887753 33567777777777777777776544 356666667766664
No 132
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=2.3e-17 Score=145.25 Aligned_cols=138 Identities=16% Similarity=0.133 Sum_probs=121.1
Q ss_pred CCCCCCEEEccCCcCc-CCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCe
Q 010736 117 NLTNLSILSLGGNQFS-GNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISM 195 (502)
Q Consensus 117 ~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 195 (502)
..++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478999999999998 78898899999999999999999866 78899999999999999999878887878999999
Q ss_pred EEcccccccccC-CccCcCCccCCccccccccccCccc---ccccCCCCCcEEEeeCccccccCCC
Q 010736 196 LFLHDNSFSGFI-PPDIGNLKSISILSLAINQFSGPIP---LSLGNLTNLKQFSLVYNNLYGSIPP 257 (502)
Q Consensus 196 L~L~~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~~~~p~ 257 (502)
|++++|.+++.. +..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+. .+|.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 999999998753 2678899999999999999997655 47889999999999999886 4444
No 133
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.70 E-value=1.1e-16 Score=144.28 Aligned_cols=126 Identities=23% Similarity=0.289 Sum_probs=99.2
Q ss_pred EEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCc
Q 010736 75 ISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQ 154 (502)
Q Consensus 75 L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 154 (502)
+++++++++ .+|.. + .++|++|+|++|+++ .+|..|.++++|++|+|++|.|++..+..|.++++|++|+|++|+
T Consensus 15 l~~~~~~l~-~ip~~-~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKG-I--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EECTTSCCS-SCCSC-C--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEcCCCCCC-cCCCC-C--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 444555555 45543 3 257888888888887 677888888888888888888887777788888888888888888
Q ss_pred CcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccc
Q 010736 155 LDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSG 205 (502)
Q Consensus 155 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 205 (502)
+++..|..|..+++|+.|+|++|++++..+..|..+++|++|++++|.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 887777788888888888888888886666667788888888888887764
No 134
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.70 E-value=7.1e-17 Score=145.48 Aligned_cols=137 Identities=23% Similarity=0.289 Sum_probs=118.3
Q ss_pred cEEEeeCccccccCCCCCccccccEEECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCc
Q 010736 242 KQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNN 321 (502)
Q Consensus 242 ~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~ 321 (502)
+.+++++|.++ .+|..+. ..++.|++++|+++. +|..+..+++|+.|++++|.+++..+..|.++++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~-~~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP-RDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC-TTCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCC-cCCCCCC-CCCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 45667777766 4555443 467888888888874 56788899999999999999998888889999999999999999
Q ss_pred cccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCccccccCcccccC
Q 010736 322 LTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLK 381 (502)
Q Consensus 322 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~dfGl~~ll~ 381 (502)
+++..+..|..+++|++|+|++|++++..+..+..+++|++|++++|++.|||.+.++..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l~~ 149 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSD 149 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHH
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHHHH
Confidence 999888899999999999999999998777789999999999999999999999887754
No 135
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.69 E-value=2.3e-16 Score=140.03 Aligned_cols=133 Identities=20% Similarity=0.207 Sum_probs=104.7
Q ss_pred CCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEccc
Q 010736 97 LAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFS 176 (502)
Q Consensus 97 L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 176 (502)
.+.+++++|+++ .+|..+ .++|++|++++|++++..+..|+.+++|++|++++|++++..+..|..+++|++|++++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467888888887 455444 36889999999998876666778888899999999988876666678888888888888
Q ss_pred CcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCccc
Q 010736 177 NNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIP 232 (502)
Q Consensus 177 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 232 (502)
|++++..+..+..+++|++|++++|++++..+..+..+++|++|++++|.+++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 88887766667888888888888888886666666777788888888887776544
No 136
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=3.5e-17 Score=140.99 Aligned_cols=128 Identities=15% Similarity=0.156 Sum_probs=111.8
Q ss_pred CCCCCEEEccCCcCc-CCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeE
Q 010736 118 LTNLSILSLGGNQFS-GNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISML 196 (502)
Q Consensus 118 l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 196 (502)
.++|++|++++|.++ +.+|..+..+++|++|++++|++++. ..+..+++|++|++++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 478999999999998 88898899999999999999999866 778899999999999999998788877789999999
Q ss_pred Eccccccccc-CCccCcCCccCCccccccccccCccc---ccccCCCCCcEEEee
Q 010736 197 FLHDNSFSGF-IPPDIGNLKSISILSLAINQFSGPIP---LSLGNLTNLKQFSLV 247 (502)
Q Consensus 197 ~L~~N~l~~~-~p~~~~~l~~L~~L~ls~N~l~~~~p---~~~~~l~~L~~L~l~ 247 (502)
++++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 9999999874 34778889999999999999987655 468888899988875
No 137
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=2.3e-16 Score=154.66 Aligned_cols=217 Identities=10% Similarity=0.056 Sum_probs=132.3
Q ss_pred CCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccc----cccCCccCcCCccC
Q 010736 142 MSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSF----SGFIPPDIGNLKSI 217 (502)
Q Consensus 142 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l----~~~~p~~~~~l~~L 217 (502)
+++|+.|+|.+ +++...+.+|..+++|+.+++.+|.+....+.+|..+.++..+.+..+.. .......|.++..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 56666666665 55544445566666666666666655545555555555444444433211 11112223333333
Q ss_pred C-ccccccccccCcccccc----cCCCCCcEEEeeCccccccCCCCCc--cccccEEECcCCcCcccCCccccCCCCCcE
Q 010736 218 S-ILSLAINQFSGPIPLSL----GNLTNLKQFSLVYNNLYGSIPPSLD--NLVLTKLSLDDNHFTSYLPQNICRGGALQI 290 (502)
Q Consensus 218 ~-~L~ls~N~l~~~~p~~~----~~l~~L~~L~l~~N~l~~~~p~~~~--~~~L~~L~ls~N~l~~~~~~~~~~~~~L~~ 290 (502)
+ .+.+... +.++..+ ....++..+.+.++-.. .....+. ...|+.+++++|+++.+.+..|..+.+|+.
T Consensus 179 ~~~i~~~~~---~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~ 254 (329)
T 3sb4_A 179 ETTIQVGAM---GKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLK 254 (329)
T ss_dssp EEEEEECTT---CCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCE
T ss_pred ceeEEecCC---CcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCE
Confidence 3 1211110 0111110 12234444544433111 0000000 247889999998888887788888999999
Q ss_pred EEccCCccccccCcccccCCCCc-EEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeee
Q 010736 291 FTVSENRFQGTIPKSLRNCTSLI-RVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNI 365 (502)
Q Consensus 291 L~ls~n~l~~~~~~~l~~l~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l 365 (502)
+++.+| ++...+..|.++.+|+ .+++.+ +++...+.+|..+++|+.+++++|++....+.+|..+++|+.++.
T Consensus 255 l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 255 IKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 999887 7766677889999998 999987 777777788999999999999999998888888999999998864
No 138
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.61 E-value=8.4e-14 Score=139.72 Aligned_cols=261 Identities=9% Similarity=0.026 Sum_probs=147.3
Q ss_pred CCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEE
Q 010736 94 FPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELA 173 (502)
Q Consensus 94 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 173 (502)
...++.+.+.+ .++.+-...|.++ +|+.+.+..| ++..-..+|.+. +|+.+.+.+ .++...+.+|..+++|+.++
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 46667777764 3555556667664 6777777766 554555566663 577777775 56655566777777888888
Q ss_pred cccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccc
Q 010736 174 LFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYG 253 (502)
Q Consensus 174 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 253 (502)
+.+|+++......|. ..+|+.+.+..+ ++.....+|.++++|+.+++..| ++..-..+|.+ .+|+.+.+. +.++.
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~ 261 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTN 261 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCE
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccE
Confidence 877777754444554 577777777644 66566667777777887777764 44344445555 567777763 33332
Q ss_pred cCCCCCcc-ccccEEECcCCcCc-----ccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccC
Q 010736 254 SIPPSLDN-LVLTKLSLDDNHFT-----SYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNIS 327 (502)
Q Consensus 254 ~~p~~~~~-~~L~~L~ls~N~l~-----~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 327 (502)
.....|.. ..|+.+.+.+|.+. .+.+..|..+.+|+.+.+. +.++..-...|.+|.+|+.+.+..| ++....
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~ 339 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINF 339 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECT
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcH
Confidence 22333333 34555555444433 2333444555555555555 2244333444555555555555332 444444
Q ss_pred cccCCCCCCcEEEccCcccccccCccccCCC-CCCeeeecC
Q 010736 328 KAFGIYPNLTFIDLSRNNFYGEISSNFGECP-KLGALNISR 367 (502)
Q Consensus 328 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~-~L~~L~l~~ 367 (502)
.+|..+ +|+.+++++|.+.......|..++ .+..|++..
T Consensus 340 ~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~ 379 (401)
T 4fdw_A 340 SAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPA 379 (401)
T ss_dssp TSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECG
T ss_pred HhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCH
Confidence 455555 555555555554433334444442 344444433
No 139
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.60 E-value=7.1e-16 Score=136.81 Aligned_cols=131 Identities=18% Similarity=0.227 Sum_probs=80.9
Q ss_pred CCCCCCCCEEECCCCcccccCCccCcCCC-CCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCC
Q 010736 91 FSSFPHLAYLDLRDNKLFGTIPPQISNLT-NLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSM 169 (502)
Q Consensus 91 ~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 169 (502)
+..+++|++|++++|+++. +|. +..+. +|++|+|++|.+++. ..++.+++|++|++++|++++..+..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 5556677777777777763 343 33433 777777777777754 456677777777777777765443444666777
Q ss_pred cEEEcccCcccccCCc--CCCCCCCCCeEEcccccccccCCcc----CcCCccCCccccccccc
Q 010736 170 VELALFSNNLNGSVPH--SLGNLTQISMLFLHDNSFSGFIPPD----IGNLKSISILSLAINQF 227 (502)
Q Consensus 170 ~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~ls~N~l 227 (502)
++|++++|+++ .+|. .+..+++|++|++++|.++. +|.. +..+++|+.|+++.|.+
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCH
Confidence 77777777764 3443 55666666666666666653 2332 45555555555555544
No 140
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.60 E-value=6.9e-17 Score=154.29 Aligned_cols=110 Identities=22% Similarity=0.387 Sum_probs=74.0
Q ss_pred ccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccccc
Q 010736 371 TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEM 450 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~~ 450 (502)
++|||++++.... ......||+.|+|||...+ +++.++|||||||+++||+||+.|+...... ..+... .....
T Consensus 173 l~DFGla~~~~~~--~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~--~~~~~~-i~~~~ 246 (290)
T 3fpq_A 173 IGDLGLATLKRAS--FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA--AQIYRR-VTSGV 246 (290)
T ss_dssp ECCTTGGGGCCTT--SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH--HHHHHH-HTTTC
T ss_pred EEeCcCCEeCCCC--ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH--HHHHHH-HHcCC
Confidence 7999999976432 2345789999999998764 6999999999999999999999998521110 000000 00000
Q ss_pred cCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 451 LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 451 ~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
..+..+ .....++..+++ .|++.+|++|||++|+++
T Consensus 247 ~~~~~~---~~~~~~~~~li~---~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 247 KPASFD---KVAIPEVKEIIE---GCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CCGGGG---GCCCHHHHHHHH---HHSCSSGGGSCCHHHHHT
T ss_pred CCCCCC---ccCCHHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 111111 011235666666 999999999999999864
No 141
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.60 E-value=7.3e-17 Score=156.91 Aligned_cols=118 Identities=23% Similarity=0.283 Sum_probs=80.3
Q ss_pred ccccCcccccCCCCCC-----cccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccc
Q 010736 371 TGDFGIAKFLKPDSSN-----WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDI 445 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~~-----~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~ 445 (502)
++|||+++.+..+... ...+.||+.|+|||...+..++.++||||+||+++||+||+.|+...... ......
T Consensus 192 l~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~---~~~~~i 268 (336)
T 4g3f_A 192 LCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG---PLCLKI 268 (336)
T ss_dssp ECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS---CCHHHH
T ss_pred EeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH---HHHHHH
Confidence 7999999988653221 12467999999999999999999999999999999999999998532211 111100
Q ss_pred ccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 446 ALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 446 ~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
.....--+.++ ....+++.++++ .|++.+|++||++.|+++.|...
T Consensus 269 ~~~~~~~~~~~---~~~s~~~~~li~---~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 269 ASEPPPIREIP---PSCAPLTAQAIQ---EGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp HHSCCGGGGSC---TTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HcCCCCchhcC---ccCCHHHHHHHH---HHccCCHhHCcCHHHHHHHHHHH
Confidence 00000001121 112355667776 99999999999999999887654
No 142
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.59 E-value=1.9e-18 Score=156.66 Aligned_cols=147 Identities=22% Similarity=0.324 Sum_probs=84.5
Q ss_pred CCCCCEEECCCCcccccCCc------cCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCC
Q 010736 94 FPHLAYLDLRDNKLFGTIPP------QISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLS 167 (502)
Q Consensus 94 l~~L~~L~Ls~N~l~g~~p~------~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 167 (502)
...++.++++.+.++|.+|. .+.++++|++|+|++|.+++ +| .+..+++|++|++++|+++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34445555555555555544 56666666666666666664 45 5566666666666666665 4455555556
Q ss_pred CCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCC-ccCcCCccCCccccccccccCccccc----------cc
Q 010736 168 SMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIP-PDIGNLKSISILSLAINQFSGPIPLS----------LG 236 (502)
Q Consensus 168 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~----------~~ 236 (502)
+|++|++++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++.+|.. +.
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHH
Confidence 66666666666654 33 35555666666666666654321 34555666666666666665544432 55
Q ss_pred CCCCCcEEE
Q 010736 237 NLTNLKQFS 245 (502)
Q Consensus 237 ~l~~L~~L~ 245 (502)
.+++|+.|+
T Consensus 172 ~l~~L~~Ld 180 (198)
T 1ds9_A 172 RLPNLKKLD 180 (198)
T ss_dssp HCSSCSEEC
T ss_pred hCCCcEEEC
Confidence 666666665
No 143
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.57 E-value=3.3e-17 Score=160.12 Aligned_cols=111 Identities=24% Similarity=0.383 Sum_probs=79.1
Q ss_pred ccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccccc
Q 010736 371 TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEM 450 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~~ 450 (502)
++|||+++.+.......+...||+.|+|||...+..++.++||||+||+++||+||+.|+...... .....+
T Consensus 166 l~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--------~~~~~i 237 (350)
T 4b9d_A 166 LGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK--------NLVLKI 237 (350)
T ss_dssp ECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHH
T ss_pred EcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHH
Confidence 799999998754322234567999999999999999999999999999999999999998531100 001111
Q ss_pred cCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 451 LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 451 ~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+....+.......+++..+++ .|++.+|++||++.|+++
T Consensus 238 ~~~~~~~~~~~~s~~~~~li~---~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 238 ISGSFPPVSLHYSYDLRSLVS---QLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHTCCCCCCTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHT
T ss_pred HcCCCCCCCccCCHHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 111111111122356677777 999999999999999865
No 144
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.57 E-value=1.7e-14 Score=127.01 Aligned_cols=86 Identities=24% Similarity=0.257 Sum_probs=46.2
Q ss_pred CCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEc
Q 010736 95 PHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELAL 174 (502)
Q Consensus 95 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 174 (502)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 45555555555555555555555555555555555555444444555555555555555555444444445555555555
Q ss_pred ccCccc
Q 010736 175 FSNNLN 180 (502)
Q Consensus 175 ~~N~l~ 180 (502)
++|.+.
T Consensus 110 ~~N~~~ 115 (170)
T 3g39_A 110 LNNPWD 115 (170)
T ss_dssp CSSCBC
T ss_pred CCCCCC
Confidence 555444
No 145
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=2e-15 Score=133.85 Aligned_cols=134 Identities=16% Similarity=0.182 Sum_probs=110.2
Q ss_pred ccCcCCCCCCEEEccCCcCcCCCCcccCCCC-CCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCC
Q 010736 113 PQISNLTNLSILSLGGNQFSGNIPHEVGLMS-HLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLT 191 (502)
Q Consensus 113 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 191 (502)
..+.++++|++|++++|+++ .+|. +..+. +|++|++++|++++. ..+..+++|++|++++|++++..+..+..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 34678899999999999999 4564 44444 999999999999975 6789999999999999999965545458899
Q ss_pred CCCeEEcccccccccCCc--cCcCCccCCccccccccccCcccc----cccCCCCCcEEEeeCcccc
Q 010736 192 QISMLFLHDNSFSGFIPP--DIGNLKSISILSLAINQFSGPIPL----SLGNLTNLKQFSLVYNNLY 252 (502)
Q Consensus 192 ~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~ls~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~ 252 (502)
+|++|++++|+++. +|. .+..+++|+.|++++|.++. +|. .+..+++|+.|+++.|.+.
T Consensus 89 ~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 89 DLTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp TCCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 99999999999964 454 78888999999999999984 455 3788899999999888765
No 146
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.56 E-value=1.6e-16 Score=155.09 Aligned_cols=113 Identities=23% Similarity=0.375 Sum_probs=81.7
Q ss_pred ccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccccc
Q 010736 371 TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEM 450 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~~ 450 (502)
++|||+++.+.......+...||+.|+|||......++.++||||+||+++||+||+.|+...... ... ..+.+.
T Consensus 211 l~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~--~~i~~~ 285 (346)
T 4fih_A 211 LSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL---KAM--KMIRDN 285 (346)
T ss_dssp ECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHH--HHHHHS
T ss_pred EecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HHH--HHHHcC
Confidence 799999998866554455688999999999999889999999999999999999999998521100 000 011111
Q ss_pred cCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 451 LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 451 ~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
..+.+... ....+++..+++ .|++.+|++||++.|+++
T Consensus 286 ~~~~~~~~-~~~s~~~~dli~---~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 286 LPPRLKNL-HKVSPSLKGFLD---RLLVRDPAQRATAAELLK 323 (346)
T ss_dssp SCCCCSCG-GGSCHHHHHHHH---HHSCSSTTTSCCHHHHTT
T ss_pred CCCCCCcc-ccCCHHHHHHHH---HHcCCChhHCcCHHHHhc
Confidence 22222211 122356677777 999999999999999865
No 147
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.56 E-value=1.2e-14 Score=142.48 Aligned_cols=245 Identities=16% Similarity=0.109 Sum_probs=167.5
Q ss_pred CCCCCEEECCCCccc--------------------ccCCccCcC--------CCCCCEEEccCCcCcCCCCcccCCCCCC
Q 010736 94 FPHLAYLDLRDNKLF--------------------GTIPPQISN--------LTNLSILSLGGNQFSGNIPHEVGLMSHL 145 (502)
Q Consensus 94 l~~L~~L~Ls~N~l~--------------------g~~p~~l~~--------l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 145 (502)
+++|+.|||++|++. ...+..|.+ +++|+.|+|.+ .++..-+.+|.++++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 566777777777766 223446777 99999999999 8886777789999999
Q ss_pred cEEEccCCcCcccCCcccCCCCCCcEEEcccCc----ccccCCcCCCCCCCCC-eEEccccc-ccccCCccCcCCccCCc
Q 010736 146 KILYIDSNQLDGSIPLEVGQLSSMVELALFSNN----LNGSVPHSLGNLTQIS-MLFLHDNS-FSGFIPPDIGNLKSISI 219 (502)
Q Consensus 146 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~----l~~~~p~~~~~l~~L~-~L~L~~N~-l~~~~p~~~~~l~~L~~ 219 (502)
+.|++++|.++...+..|..+.++..+.+..+. ........|.++..|+ .+.+.... +...+...-....++..
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 206 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINF 206 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSE
T ss_pred ceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccce
Confidence 999999999987778889888888877766532 2223334455566665 44443221 11000001112334444
Q ss_pred cccccccccCcccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCCc-EEEccCCc
Q 010736 220 LSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQ-IFTVSENR 297 (502)
Q Consensus 220 L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~-~L~ls~n~ 297 (502)
+.+.++-...........+++|+.+++++|+++...+..|.. ..|+.+++.+| ++.+.+..|..+.+|+ .+++.+ .
T Consensus 207 l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~ 284 (329)
T 3sb4_A 207 LTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-S 284 (329)
T ss_dssp EEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-T
T ss_pred EEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-c
Confidence 444433111111111123678888888888887555555555 57888888887 7777777888899999 999988 6
Q ss_pred cccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEc
Q 010736 298 FQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDL 341 (502)
Q Consensus 298 l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 341 (502)
++..-+..|.+|++|+.+++++|+++...+.+|..+++|+.++.
T Consensus 285 l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 285 VTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred ceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 77666788999999999999999999888889999999998864
No 148
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=4.7e-18 Score=154.04 Aligned_cols=152 Identities=22% Similarity=0.296 Sum_probs=127.6
Q ss_pred CCEEEEEecCCCCceecCc-----ccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCC
Q 010736 70 GRVINISLRGVGLKGKLHA-----FSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSH 144 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~-----~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 144 (502)
.+++.++++.+.+.|.+|. ..|..+++|++|+|++|.+++ +| .+.++++|++|++++|.++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3566667777777777665 138899999999999999997 67 8999999999999999999 67888888899
Q ss_pred CcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCC-cCCCCCCCCCeEEcccccccccCCcc----------CcC
Q 010736 145 LKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVP-HSLGNLTQISMLFLHDNSFSGFIPPD----------IGN 213 (502)
Q Consensus 145 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~----------~~~ 213 (502)
|++|++++|++++ +| .+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+++..|.. +..
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~ 172 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKR 172 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHh
Confidence 9999999999996 45 68889999999999999985332 46889999999999999998876653 778
Q ss_pred CccCCcccccccccc
Q 010736 214 LKSISILSLAINQFS 228 (502)
Q Consensus 214 l~~L~~L~ls~N~l~ 228 (502)
+++|+.|+ +|.++
T Consensus 173 l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 173 LPNLKKLD--GMPVD 185 (198)
T ss_dssp CSSCSEEC--CGGGT
T ss_pred CCCcEEEC--CcccC
Confidence 89999887 56555
No 149
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.55 E-value=3.6e-14 Score=125.44 Aligned_cols=103 Identities=18% Similarity=0.228 Sum_probs=55.5
Q ss_pred EEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCC
Q 010736 74 NISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSN 153 (502)
Q Consensus 74 ~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 153 (502)
.+++++++++ .+|.. +. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 16 ~l~~~~n~l~-~iP~~-~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAG-IP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp EEECCSSCCS-SCCSC-CC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCCC-ccCCC-cC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 4566666653 44442 22 55666666666666555555566666666666666665444444455555555555555
Q ss_pred cCcccCCcccCCCCCCcEEEcccCccc
Q 010736 154 QLDGSIPLEVGQLSSMVELALFSNNLN 180 (502)
Q Consensus 154 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 180 (502)
+|++..+..|..+++|+.|++++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 555433333555555555555555444
No 150
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.53 E-value=5.3e-14 Score=123.86 Aligned_cols=107 Identities=23% Similarity=0.293 Sum_probs=90.8
Q ss_pred CCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEccc
Q 010736 97 LAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFS 176 (502)
Q Consensus 97 L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 176 (502)
.+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 468999999998 4676663 7899999999999988888899999999999999999977777788899999999999
Q ss_pred CcccccCCcCCCCCCCCCeEEccccccccc
Q 010736 177 NNLNGSVPHSLGNLTQISMLFLHDNSFSGF 206 (502)
Q Consensus 177 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 206 (502)
|++++..+..|..+++|++|+|++|.+...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 999877777788888999999998888754
No 151
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.52 E-value=6.3e-16 Score=148.42 Aligned_cols=109 Identities=26% Similarity=0.417 Sum_probs=74.9
Q ss_pred ccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccccc
Q 010736 371 TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEM 450 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~~ 450 (502)
++|||+++.............||+.|+|||......++.++||||+||+++||+||+.|+...... . ....+
T Consensus 167 l~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~---~-----~~~~i 238 (304)
T 3ubd_A 167 LTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK---E-----TMTMI 238 (304)
T ss_dssp EESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---H-----HHHHH
T ss_pred ecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH---H-----HHHHH
Confidence 689999997755444445678999999999999999999999999999999999999998521110 0 01111
Q ss_pred cCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCC-----HHHHH
Q 010736 451 LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT-----MKIVS 491 (502)
Q Consensus 451 ~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~-----m~~v~ 491 (502)
......-+ ....+++..+++ .|++.+|++||+ ++|+.
T Consensus 239 ~~~~~~~p-~~~s~~~~~li~---~~L~~dP~~R~ta~~~~~~eil 280 (304)
T 3ubd_A 239 LKAKLGMP-QFLSPEAQSLLR---MLFKRNPANRLGAGPDGVEEIK 280 (304)
T ss_dssp HHCCCCCC-TTSCHHHHHHHH---HHTCSSGGGSTTCSTTTHHHHH
T ss_pred HcCCCCCC-CcCCHHHHHHHH---HHcccCHHHCCCCCcCCHHHHH
Confidence 11111111 122356677777 999999999998 56665
No 152
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.51 E-value=6.2e-16 Score=154.66 Aligned_cols=125 Identities=22% Similarity=0.356 Sum_probs=88.3
Q ss_pred CCCeeeecCCcc---------ccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCC
Q 010736 359 KLGALNISRNNI---------TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429 (502)
Q Consensus 359 ~L~~L~l~~N~l---------~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p 429 (502)
++.|.||+..|| ++|||+++.+.......+...||+.|+|||......++.++||||+||+++||+||+.|
T Consensus 267 ~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~P 346 (423)
T 4fie_A 267 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346 (423)
T ss_dssp TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 445556655554 79999999886655555667899999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+...... ... ..+.+...+.+... ....+++..+++ .|++.+|++||++.|+++
T Consensus 347 F~~~~~~---~~~--~~i~~~~~~~~~~~-~~~s~~~~dli~---~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 347 YFNEPPL---KAM--KMIRDNLPPRLKNL-HKVSPSLKGFLD---RLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TTTSCHH---HHH--HHHHHSCCCCCSCT-TSSCHHHHHHHH---HHSCSSTTTSCCHHHHTT
T ss_pred CCCcCHH---HHH--HHHHcCCCCCCccc-ccCCHHHHHHHH---HHcCCChhHCcCHHHHhc
Confidence 8521100 000 01111122222211 122356777777 999999999999999865
No 153
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.50 E-value=3.5e-15 Score=145.89 Aligned_cols=126 Identities=33% Similarity=0.517 Sum_probs=90.4
Q ss_pred cccccCcccccCCCCC-CcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCC---------C
Q 010736 370 ITGDFGIAKFLKPDSS-NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSS---------P 439 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~-~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~---------~ 439 (502)
..+|||+++....... ......||.+|+|||.......+.++||||||++++||+||+.|++....... .
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 174 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp EECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred EeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 4689999998754332 23345699999999999888999999999999999999999999863211100 0
Q ss_pred CCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 440 SLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 440 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
..........+.++.+... ...++...+.+++..|++.+|++||++.||+++|+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGN--YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTS--CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHhhchhhhhhcChhhccc--cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 0111122334455554432 2334556677777799999999999999999999864
No 154
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.50 E-value=1.2e-13 Score=121.97 Aligned_cols=105 Identities=23% Similarity=0.356 Sum_probs=89.5
Q ss_pred CEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccC
Q 010736 98 AYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSN 177 (502)
Q Consensus 98 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 177 (502)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|+++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999986 6777664 88999999999999888888999999999999999999766666788999999999999
Q ss_pred cccccCCcCCCCCCCCCeEEcccccccc
Q 010736 178 NLNGSVPHSLGNLTQISMLFLHDNSFSG 205 (502)
Q Consensus 178 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 205 (502)
+|++..+..|..+++|++|+|++|.+..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 9987666668888889999999888774
No 155
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.50 E-value=1.8e-12 Score=129.93 Aligned_cols=245 Identities=12% Similarity=0.079 Sum_probs=199.3
Q ss_pred cCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCe
Q 010736 116 SNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISM 195 (502)
Q Consensus 116 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 195 (502)
..+..++.+.+.+ .++..-..+|.+. +|+.+.+..| ++..-..+|.+ .+|+.+.+.+ .++...+.+|.++++|+.
T Consensus 110 ~~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~ 184 (401)
T 4fdw_A 110 EILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKK 184 (401)
T ss_dssp EECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCE
T ss_pred EecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCe
Confidence 3457788888865 4664556778875 7999999877 77666677877 4799999986 677677788999999999
Q ss_pred EEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCccccccEEECcCCcCc
Q 010736 196 LFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDNLVLTKLSLDDNHFT 275 (502)
Q Consensus 196 L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~L~~L~ls~N~l~ 275 (502)
+++.+|+++......|. ..+|+.+.+..+ ++......|.++++|+.+++..| ++......|....|+.+.+ .+.++
T Consensus 185 l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~~~L~~i~l-p~~i~ 260 (401)
T 4fdw_A 185 ADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRESGITTVKL-PNGVT 260 (401)
T ss_dssp EECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTTCCCSEEEE-ETTCC
T ss_pred eecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCccccccccCCccEEEe-CCCcc
Confidence 99999999977666776 589999999854 76666778999999999999875 5545556666678999999 56677
Q ss_pred ccCCccccCCCCCcEEEccCCccc-----cccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCccccccc
Q 010736 276 SYLPQNICRGGALQIFTVSENRFQ-----GTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEI 350 (502)
Q Consensus 276 ~~~~~~~~~~~~L~~L~ls~n~l~-----~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 350 (502)
.+....|..+.+|+.+.+.+|.+. ...+..|.+|++|+.+.+. +.++.....+|..+.+|+.++|..| +....
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~ 338 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQIN 338 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEEC
T ss_pred EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEc
Confidence 777888999999999999988765 3556789999999999998 5588777889999999999999665 77667
Q ss_pred CccccCCCCCCeeeecCCcccc
Q 010736 351 SSNFGECPKLGALNISRNNITG 372 (502)
Q Consensus 351 ~~~~~~~~~L~~L~l~~N~l~~ 372 (502)
..+|..+ +|+.+++++|.+..
T Consensus 339 ~~aF~~~-~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 339 FSAFNNT-GIKEVKVEGTTPPQ 359 (401)
T ss_dssp TTSSSSS-CCCEEEECCSSCCB
T ss_pred HHhCCCC-CCCEEEEcCCCCcc
Confidence 7889999 99999999997643
No 156
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.49 E-value=1.8e-15 Score=143.23 Aligned_cols=109 Identities=21% Similarity=0.325 Sum_probs=67.3
Q ss_pred ccccCcccccCCCCCCcccccccccccCcccccccee-cccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 371 TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKI-TEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~-s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
.+|||+++....... .+...||+.|+|||...+..+ +.++||||+||+++||+||+.|++.... ..+ ...
T Consensus 153 l~DFGla~~~~~~~~-~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~---~~~-----~~~ 223 (275)
T 3hyh_A 153 IADFGLSNIMTDGNF-LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI---PVL-----FKN 223 (275)
T ss_dssp ECCSSCC----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHH-----HHH
T ss_pred EeecCCCeecCCCCc-cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH---HHH-----HHH
Confidence 699999998754332 335689999999999987775 5799999999999999999999853110 000 011
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+......-+ ....+++..+++ .|++.+|++|||++|+++
T Consensus 224 i~~~~~~~p-~~~s~~~~~li~---~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 224 ISNGVYTLP-KFLSPGAAGLIK---RMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHTCCCCC-TTSCHHHHHHHH---HHSCSSGGGSCCHHHHHH
T ss_pred HHcCCCCCC-CCCCHHHHHHHH---HHccCChhHCcCHHHHHc
Confidence 111111111 112355667777 999999999999999976
No 157
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.47 E-value=1.7e-14 Score=139.32 Aligned_cols=130 Identities=18% Similarity=0.258 Sum_probs=74.2
Q ss_pred ccccccCcccccCCCCCC----cccccccccccCccccccc------eecccceeeeeceeeeehhcCCCCCCcccCCCC
Q 010736 369 NITGDFGIAKFLKPDSSN----WTGFAGTYGYIAPELAYTM------KITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSS 438 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~~~----~~~~~gt~gy~aPE~~~~~------~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~ 438 (502)
-..+|||+++........ .....||..|+|||..... ..+.++|||||||+++||+||+.|.+.......
T Consensus 147 ~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~ 226 (303)
T 3gxj_A 147 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 226 (303)
T ss_dssp C-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCC
T ss_pred EEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeec
Confidence 347899999876543221 1234799999999998765 566789999999999999999554332111000
Q ss_pred C---------CC--CcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcC
Q 010736 439 P---------SL--NTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499 (502)
Q Consensus 439 ~---------~~--~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~ 499 (502)
+ .. ...........+..+... ...++...+.++...|++.+|++||++.||+++|+.+..
T Consensus 227 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 227 PYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGG-GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred cccccCCCCccHHHHHHHHHHhhcCCCccccc-cchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 0 00 000001111222222110 111233344455559999999999999999999998764
No 158
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.47 E-value=5.9e-15 Score=143.13 Aligned_cols=126 Identities=21% Similarity=0.375 Sum_probs=81.1
Q ss_pred cccccCcccccCCC--CCCcccccccccccCccccc---cceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcc
Q 010736 370 ITGDFGIAKFLKPD--SSNWTGFAGTYGYIAPELAY---TMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTD 444 (502)
Q Consensus 370 l~~dfGl~~ll~~~--~~~~~~~~gt~gy~aPE~~~---~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~ 444 (502)
..+|||+++..... ........||..|+|||... ...++.++|||||||+++||+||+.|++...... .. ..
T Consensus 172 kl~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~--~~-~~ 248 (307)
T 3lb7_A 172 KIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD--QI-IF 248 (307)
T ss_dssp EECCCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--HH-HH
T ss_pred EEccCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH--HH-HH
Confidence 36899999876432 12223457999999999886 5668889999999999999999999985321100 00 00
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcCCC
Q 010736 445 IALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAPSL 501 (502)
Q Consensus 445 ~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~~~ 501 (502)
........+.+........+++..++. .|++.+|++||++.||++.|+.++.++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 249 MVGRGYASPDLSKLYKNCPKAMKRLVA---DCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp HHHHTCCCCCSTTSCSSSCHHHHHHHH---HHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred HHhcCCCCcchhhhhcCCcHHHHHHHH---HHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 000111222222111122355666666 999999999999999999999887654
No 159
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.47 E-value=1.3e-14 Score=141.50 Aligned_cols=126 Identities=33% Similarity=0.414 Sum_probs=88.8
Q ss_pred cccccCcccccCCCC--CCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCC------
Q 010736 370 ITGDFGIAKFLKPDS--SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSL------ 441 (502)
Q Consensus 370 l~~dfGl~~ll~~~~--~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~------ 441 (502)
..+|||+++...... .......||..|+|||......++.++||||||++++||+||+.|+...........
T Consensus 179 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~ 258 (321)
T 2qkw_B 179 KITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE 258 (321)
T ss_dssp EECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHH
T ss_pred EEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhh
Confidence 478999998764321 222345689999999999888999999999999999999999999863222111100
Q ss_pred -CcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 442 -NTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 442 -~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
.......+++++.+.... ..+....+.++...|++.+|++||+|.||++.|+.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 313 (321)
T 2qkw_B 259 SHNNGQLEQIVDPNLADKI--RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313 (321)
T ss_dssp HHTTTCCCSSSSSSCTTCS--CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccccHHHhcChhhcccc--CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 001123345566554321 234445566666699999999999999999999976
No 160
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.45 E-value=4.2e-15 Score=144.32 Aligned_cols=120 Identities=25% Similarity=0.393 Sum_probs=73.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............||..|+|||.......+.++|||||||+++||+||+.|++..... ...... ...
T Consensus 179 kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~---~~~~~~-~~~ 254 (309)
T 3p86_A 179 KVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA---QVVAAV-GFK 254 (309)
T ss_dssp EECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH---HHHHHH-HHS
T ss_pred EECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHH-Hhc
Confidence 3689999987654433334567999999999999888999999999999999999999997532110 000000 000
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcC
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~ 499 (502)
.....++ .....++..+++ .|++.+|++||++.||++.|+.+..
T Consensus 255 ~~~~~~~---~~~~~~l~~li~---~~l~~dP~~Rps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 255 CKRLEIP---RNLNPQVAAIIE---GCWTNEPWKRPSFATIMDLLRPLIK 298 (309)
T ss_dssp CCCCCCC---TTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred CCCCCCC---ccCCHHHHHHHH---HHccCChhhCcCHHHHHHHHHHHHH
Confidence 0111111 112345666666 9999999999999999999998743
No 161
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.44 E-value=3.6e-15 Score=143.22 Aligned_cols=106 Identities=23% Similarity=0.394 Sum_probs=77.1
Q ss_pred ccccCcccccCCCCC--CcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccc
Q 010736 371 TGDFGIAKFLKPDSS--NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALD 448 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~--~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~ 448 (502)
++|||+++.+..... ......||+.|+|||...+..++.++|+||+||+++||+||+.|+..... ... ..
T Consensus 173 l~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~---~~~-----~~ 244 (311)
T 4aw0_A 173 ITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE---GLI-----FA 244 (311)
T ss_dssp ECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHH-----HH
T ss_pred EEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHH-----HH
Confidence 799999998864322 23457899999999999998999999999999999999999999852110 000 11
Q ss_pred ccc--CCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHH
Q 010736 449 EML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIV 490 (502)
Q Consensus 449 ~~~--d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v 490 (502)
.+. +..++. ...+++..+++ .|++.+|++||+.+|+
T Consensus 245 ~i~~~~~~~p~---~~s~~~~dli~---~lL~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 245 KIIKLEYDFPE---KFFPKARDLVE---KLLVLDATKRLGCEEM 282 (311)
T ss_dssp HHHHTCCCCCT---TCCHHHHHHHH---HHSCSSGGGSTTSGGG
T ss_pred HHHcCCCCCCc---ccCHHHHHHHH---HHccCCHhHCcChHHH
Confidence 111 112221 12245667777 9999999999999886
No 162
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.43 E-value=1.4e-14 Score=141.50 Aligned_cols=128 Identities=19% Similarity=0.222 Sum_probs=81.8
Q ss_pred cccccCcccccCCCCC--CcccccccccccCcccccc-----ceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSS--NWTGFAGTYGYIAPELAYT-----MKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLN 442 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~--~~~~~~gt~gy~aPE~~~~-----~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~ 442 (502)
..+|||+++....... ......||..|+|||...+ ...+.++|||||||+++||+||+.|++.........+.
T Consensus 171 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~ 250 (322)
T 3soc_A 171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFE 250 (322)
T ss_dssp EECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTH
T ss_pred EEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchh
Confidence 4799999987754322 2234679999999999876 46778999999999999999999998632221111000
Q ss_pred c-------ccc-----cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 443 T-------DIA-----LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 443 ~-------~~~-----~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
. ... ......|.+... .....+...+.++...|++.+|++||++.||+++|+.++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 251 EEIGQHPSLEDMQEVVVHKKKRPVLRDY-WQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp HHHCSSCCHHHHHHHHTTSCCCCCCCGG-GGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhhccCCchhhhhhhhhcccCCCCcccc-ccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0 000 011111221110 001112223444445999999999999999999999875
No 163
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.42 E-value=4.8e-14 Score=136.50 Aligned_cols=127 Identities=28% Similarity=0.458 Sum_probs=85.1
Q ss_pred cccccCcccccCCCCCC--cccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCC-CCC----
Q 010736 370 ITGDFGIAKFLKPDSSN--WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSP-SLN---- 442 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~--~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~-~~~---- 442 (502)
..+|||+++........ .....|+.+|+|||...+ ..+.++||||||++++||+||+.|++........ .+.
T Consensus 173 kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 251 (307)
T 2nru_A 173 KISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIE 251 (307)
T ss_dssp EECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHH
T ss_pred EEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhh
Confidence 46899999876543221 224578999999998764 5889999999999999999999998643221110 000
Q ss_pred -cccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcCC
Q 010736 443 -TDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAPS 500 (502)
Q Consensus 443 -~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~~ 500 (502)
....+.+.+++.+.... ......+.++...|++.+|++||+++||++.|+++..|
T Consensus 252 ~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~s 307 (307)
T 2nru_A 252 DEEKTIEDYIDKKMNDAD---STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307 (307)
T ss_dssp TTSCCHHHHSCSSCSCCC---HHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC--
T ss_pred hhhhhhhhhccccccccc---hHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhcC
Confidence 00112334555543222 22233444555599999999999999999999998754
No 164
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.41 E-value=1.5e-14 Score=139.63 Aligned_cols=128 Identities=20% Similarity=0.282 Sum_probs=78.5
Q ss_pred ccccccCcccccCCCCCC----cccccccccccCccccccc------eecccceeeeeceeeeehhcC----------CC
Q 010736 369 NITGDFGIAKFLKPDSSN----WTGFAGTYGYIAPELAYTM------KITEKCDVYSFGVLVLEVIKG----------KH 428 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~~~----~~~~~gt~gy~aPE~~~~~------~~s~k~Dvysfgv~llElltg----------~~ 428 (502)
-..+|||+++........ .....||..|+|||..... ..+.++|||||||+++||+|| +.
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~ 231 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence 347899999876543221 1234799999999998776 667899999999999999999 55
Q ss_pred CCCcccCCCCCC-CCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 429 PRDFLSSTSSPS-LNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 429 p~~~~~~~~~~~-~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
|+.......... ........+...+.++.. .........+.++...|++.+|++||++.||+++|+++
T Consensus 232 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNR-WFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG-GGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccccCCCCcchhhhhHHHhccCCCCCCChh-hccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 543211110000 000000011112222210 00112223344444599999999999999999999876
No 165
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.41 E-value=5.2e-13 Score=131.64 Aligned_cols=109 Identities=25% Similarity=0.298 Sum_probs=83.1
Q ss_pred CCccceeeeCCCCCEEEEEecCCCCceecCcccCCCCCCCCEEECCC-CcccccCCccCcCCCCCCEEEccCCcCcCCCC
Q 010736 58 PCAWSGISCNDAGRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRD-NKLFGTIPPQISNLTNLSILSLGGNQFSGNIP 136 (502)
Q Consensus 58 ~C~W~Gv~C~~~~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~-N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p 136 (502)
.|.|..|.|+..+ +|+ .+|. +..+++|++|+|++ |.|++..|..|+++++|++|+|++|+|++..|
T Consensus 7 ~C~~~~v~~~~~n----------~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 73 (347)
T 2ifg_A 7 PHGSSGLRCTRDG----------ALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP 73 (347)
T ss_dssp CSSSSCEECCSSC----------CCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT
T ss_pred cccCCEEEcCCCC----------CCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH
Confidence 3778777775421 444 3565 78888888888885 88888777888888888888888888888888
Q ss_pred cccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCccc
Q 010736 137 HEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLN 180 (502)
Q Consensus 137 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 180 (502)
..|+++++|++|+|++|+|++..+..|..++ |+.|+|.+|.+.
T Consensus 74 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 74 DAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp TGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred HHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 8888888888888888888865555555555 777777777776
No 166
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.41 E-value=3.1e-14 Score=139.26 Aligned_cols=115 Identities=27% Similarity=0.434 Sum_probs=78.7
Q ss_pred cccccCcccccCCCCC--CcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSS--NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~--~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++....... ......+|.+|+|||...+..++.++|||||||+++||+| |+.|++......
T Consensus 157 kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--------- 227 (327)
T 3poz_A 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--------- 227 (327)
T ss_dssp EECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---------
T ss_pred EEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---------
Confidence 4789999998754332 2234456889999999999999999999999999999999 999985321110
Q ss_pred cccccCC--CCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 447 LDEMLDP--RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 447 ~~~~~d~--~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
..+.+.. ....+ .....++..++ ..|++.+|++||+|.||+++|+.+
T Consensus 228 ~~~~~~~~~~~~~~-~~~~~~~~~li---~~~l~~~p~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 228 ISSILEKGERLPQP-PICTIDVYMIM---VKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp HHHHHHTTCCCCCC-TTBCHHHHHHH---HHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCC-ccCCHHHHHHH---HHHcCCChhhCCCHHHHHHHHHHH
Confidence 0111110 11111 11223444444 499999999999999999999876
No 167
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.40 E-value=5.4e-15 Score=142.29 Aligned_cols=121 Identities=23% Similarity=0.361 Sum_probs=70.7
Q ss_pred CCCeeeecCCcc---------ccccCcccccCCCCC------------CcccccccccccCccccccceecccceeeeec
Q 010736 359 KLGALNISRNNI---------TGDFGIAKFLKPDSS------------NWTGFAGTYGYIAPELAYTMKITEKCDVYSFG 417 (502)
Q Consensus 359 ~L~~L~l~~N~l---------~~dfGl~~ll~~~~~------------~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfg 417 (502)
++.|.||+..|| ++|||+++.+..... ..+...||+.|+|||...+..++.++||||+|
T Consensus 138 ~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlG 217 (299)
T 4g31_A 138 GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLG 217 (299)
T ss_dssp TCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHH
T ss_pred cCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHH
Confidence 445555555443 699999998754321 12345799999999999999999999999999
Q ss_pred eeeeehhcCCCCCCcccCCCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 418 VLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 418 v~llElltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
|+++||++ |+..... .......+.+...+........+...+++ .|++.+|++||++.|+++
T Consensus 218 vilyell~---Pf~~~~~-------~~~~~~~~~~~~~p~~~~~~~~~~~~li~---~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 218 LILFELLY---PFSTQME-------RVRTLTDVRNLKFPPLFTQKYPCEYVMVQ---DMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHS---CCSSHHH-------HHHHHHHHHTTCCCHHHHHHCHHHHHHHH---HHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHcc---CCCCccH-------HHHHHHHHhcCCCCCCCcccCHHHHHHHH---HHcCCChhHCcCHHHHhc
Confidence 99999997 6531100 00011111222221000001123344555 899999999999999975
No 168
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.39 E-value=3.8e-14 Score=136.36 Aligned_cols=122 Identities=18% Similarity=0.243 Sum_probs=82.9
Q ss_pred cccccCcccccCCCCCC-------cccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSN-------WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLN 442 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~-------~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~ 442 (502)
..+|||+++........ .....||..|+|||...+...+.++|||||||+++||+||+.|+............
T Consensus 148 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 227 (296)
T 3uzp_A 148 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 227 (296)
T ss_dssp EECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHH
T ss_pred EEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhh
Confidence 36899999887543221 23467999999999999989999999999999999999999998643221111100
Q ss_pred cccccccccCC--CCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 443 TDIALDEMLDP--RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 443 ~~~~~~~~~d~--~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
..........+ .+. ....+++..+++ .|++.+|++||++.||++.|+++
T Consensus 228 ~~~~~~~~~~~~~~~~---~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~l~~~ 278 (296)
T 3uzp_A 228 ERISEKKMSTPIEVLC---KGYPSEFATYLN---FCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HHHHHHHHHSCHHHHT---TTSCHHHHHHHH---HHHTSCTTCCCCHHHHHHHHHHH
T ss_pred hhhcccccCCchHHHH---hhCCHHHHHHHH---HHHhcCcCcCCCHHHHHHHHHHH
Confidence 00000000000 000 011245666666 99999999999999999999986
No 169
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.39 E-value=3.7e-14 Score=137.59 Aligned_cols=121 Identities=22% Similarity=0.394 Sum_probs=81.4
Q ss_pred ccccccCcccccCCCCCC--------------cccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCccc
Q 010736 369 NITGDFGIAKFLKPDSSN--------------WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLS 434 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~~~--------------~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~ 434 (502)
-..+|||+++........ .....||..|+|||...+...+.++||||||++++||+||+.|+....
T Consensus 147 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~ 226 (310)
T 3s95_A 147 VVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYL 226 (310)
T ss_dssp EEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTS
T ss_pred EEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchh
Confidence 347899999877432211 114579999999999999999999999999999999999999875322
Q ss_pred CCCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 435 STSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 435 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
..... . ........++..+.. ..+++.++++ .|++.+|++||++.|+++.|+.++
T Consensus 227 ~~~~~-~--~~~~~~~~~~~~~~~---~~~~l~~li~---~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 227 PRTMD-F--GLNVRGFLDRYCPPN---CPPSFFPITV---RCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp CBCTT-S--SBCHHHHHHHTCCTT---CCTTHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhHHH-H--hhhhhccccccCCCC---CCHHHHHHHH---HHccCChhhCcCHHHHHHHHHHHH
Confidence 11110 0 011111122222111 1134555555 999999999999999999999874
No 170
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.39 E-value=5.7e-14 Score=139.87 Aligned_cols=117 Identities=27% Similarity=0.391 Sum_probs=81.4
Q ss_pred cccccCcccccCCCCC--CcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSS--NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~--~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++....... ......++..|+|||...+..++.++|||||||+++||+| |+.|+...... .... .
T Consensus 243 kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~---~~~~--~ 317 (370)
T 2psq_A 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---ELFK--L 317 (370)
T ss_dssp EECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHH--H
T ss_pred EEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHH--H
Confidence 4789999997654322 2233557789999999998899999999999999999999 99997532110 0000 0
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
+..-..+..+ ....+++..+++ .|++.+|++||++.|+++.|+.+
T Consensus 318 ~~~~~~~~~~---~~~~~~l~~li~---~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 318 LKEGHRMDKP---ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp HHTTCCCCCC---TTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HhcCCCCCCC---CCCCHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHH
Confidence 0000111111 122345666666 99999999999999999999876
No 171
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.38 E-value=5.3e-14 Score=136.35 Aligned_cols=118 Identities=26% Similarity=0.435 Sum_probs=75.5
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++..... .....||..|+|||...+...+.++||||||++++||+||+.|++....... ........
T Consensus 146 kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~~~~~~~ 219 (307)
T 2eva_A 146 KICDFGTACDIQTH---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF---RIMWAVHN 219 (307)
T ss_dssp EECCCCC---------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH---HHHHHHHT
T ss_pred EEcccccccccccc---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH---HHHHHHhc
Confidence 36899998765432 2335689999999999988999999999999999999999999863221100 00000000
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcC
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~ 499 (502)
...+... ....+++.++++ .|++.+|++||++.||+++|+.+..
T Consensus 220 ~~~~~~~---~~~~~~l~~li~---~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 220 GTRPPLI---KNLPKPIESLMT---RCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp TCCCCCB---TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred CCCCCcc---cccCHHHHHHHH---HHhcCChhhCcCHHHHHHHHHHHHH
Confidence 1111111 112245666665 9999999999999999999998743
No 172
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.38 E-value=2e-14 Score=138.22 Aligned_cols=124 Identities=18% Similarity=0.251 Sum_probs=83.0
Q ss_pred cccccCcccccCCCCC-------CcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSS-------NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLN 442 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~-------~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~ 442 (502)
..+|||+++....... ......||..|+|||...+...+.++|||||||+++||+||+.|+............
T Consensus 148 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 227 (296)
T 4hgt_A 148 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 227 (296)
T ss_dssp EECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHH
T ss_pred EEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhh
Confidence 3689999988754322 122467899999999999989999999999999999999999998643222111110
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 443 TDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 443 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
..........+ .........+++.++++ .|++.+|++||++.||++.|+.+
T Consensus 228 ~~~~~~~~~~~-~~~~~~~~~~~l~~li~---~~l~~~p~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 228 ERISEKKMSTP-IEVLCKGYPSEFATYLN---FCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HHHHHHHHHSC-HHHHTTTSCHHHHHHHH---HHHTSCTTCCCCHHHHHHHHHHH
T ss_pred hhhhcccccch-hhhhhccCCHHHHHHHH---HHHhcCCCCCCCHHHHHHHHHHH
Confidence 00000000000 00000011245666666 99999999999999999999886
No 173
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.38 E-value=4.9e-14 Score=139.59 Aligned_cols=119 Identities=25% Similarity=0.349 Sum_probs=81.0
Q ss_pred cccccCcccccCCCCC--CcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSS--NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~--~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++.+..... ......||..|+|||...+..++.++|||||||+++||+| |+.|+....... .. . ..
T Consensus 233 kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~-~-~~ 308 (359)
T 3vhe_A 233 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EF-C-RR 308 (359)
T ss_dssp EECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--HH-H-HH
T ss_pred EEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH--HH-H-HH
Confidence 3689999987644322 2234568889999999999999999999999999999999 999975321100 00 0 00
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
..+-..+..+ ....+++.+++. .|++.+|++||+|+||++.|+++.
T Consensus 309 ~~~~~~~~~~---~~~~~~l~~li~---~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 309 LKEGTRMRAP---DYTTPEMYQTML---DCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp HHHTCCCCCC---TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHcCCCCCCC---CCCCHHHHHHHH---HHccCChhhCCCHHHHHHHHHHHH
Confidence 0111111111 112245555555 999999999999999999999864
No 174
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.38 E-value=1.3e-12 Score=128.75 Aligned_cols=105 Identities=17% Similarity=0.138 Sum_probs=92.1
Q ss_pred CEEECCCC-cccccCCccCcCCCCCCEEEccC-CcCcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcc
Q 010736 98 AYLDLRDN-KLFGTIPPQISNLTNLSILSLGG-NQFSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALF 175 (502)
Q Consensus 98 ~~L~Ls~N-~l~g~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 175 (502)
..++++++ +|+ .+|. |..+++|++|+|++ |.|++..|..|+++++|+.|+|++|+|++..|..|..+++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35688888 888 4787 99999999999996 99998888899999999999999999999999999999999999999
Q ss_pred cCcccccCCcCCCCCCCCCeEEcccccccc
Q 010736 176 SNNLNGSVPHSLGNLTQISMLFLHDNSFSG 205 (502)
Q Consensus 176 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 205 (502)
+|+|++..+..|..++ |+.|+|.+|.+..
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 9999976666666655 9999999998874
No 175
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.37 E-value=1.4e-14 Score=144.06 Aligned_cols=123 Identities=13% Similarity=0.161 Sum_probs=84.4
Q ss_pred cccccCcccccCCCCC-------CcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCC-C
Q 010736 370 ITGDFGIAKFLKPDSS-------NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPS-L 441 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~-------~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~-~ 441 (502)
.++|||+++.+..... ......||..|+|||...+..++.++|||||||+++||+||+.|++......... .
T Consensus 194 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~ 273 (364)
T 3op5_A 194 YLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRD 273 (364)
T ss_dssp EECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHH
T ss_pred EEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHH
Confidence 3689999987753211 1123559999999999999899999999999999999999999986321110000 0
Q ss_pred C---cccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 442 N---TDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 442 ~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
. ....+.+++++.+... ...+++..+++ .|++.+|++||++.+|++.|+.+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~---~cl~~~p~~RP~~~~l~~~l~~~ 327 (364)
T 3op5_A 274 SKIRYRENIASLMDKCFPAA--NAPGEIAKYME---TVKLLDYTEKPLYENLRDILLQG 327 (364)
T ss_dssp HHHHHHHCHHHHHHHHSCTT--CCCHHHHHHHH---HHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHhhhhHHHHHHHhcccc--cCHHHHHHHHH---HHhcCCCCCCCCHHHHHHHHHHH
Confidence 0 0001223333333211 12355666666 99999999999999999999876
No 176
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.37 E-value=5.4e-14 Score=137.94 Aligned_cols=131 Identities=25% Similarity=0.326 Sum_probs=78.2
Q ss_pred cccccCcccccCCCCCC----cccccccccccCccccccceeccc------ceeeeeceeeeehhcCCCCCCcccCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSN----WTGFAGTYGYIAPELAYTMKITEK------CDVYSFGVLVLEVIKGKHPRDFLSSTSSP 439 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~----~~~~~gt~gy~aPE~~~~~~~s~k------~Dvysfgv~llElltg~~p~~~~~~~~~~ 439 (502)
..+|||+++........ .....||..|+|||.........+ +|||||||+++||+||+.|.........+
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 46899999876543221 124578999999999876655544 99999999999999995554321111000
Q ss_pred --CCC-cc---ccc-----ccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcCCC
Q 010736 440 --SLN-TD---IAL-----DEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAPSL 501 (502)
Q Consensus 440 --~~~-~~---~~~-----~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~~~ 501 (502)
... .. ... .....+..+.. ....+....+.++...|++.+|++||++.||++.|+.+..+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 262 YHDLVPSDPSYEDMREIVCIKKLRPSFPNR-WSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGG-GGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred HhhhcCCCCchhhhHHHHhhhccCcccccc-chhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 000 00 000 11112222110 001122333444555999999999999999999999986543
No 177
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.37 E-value=5.5e-14 Score=137.89 Aligned_cols=126 Identities=19% Similarity=0.261 Sum_probs=79.2
Q ss_pred cccccCcccccCCCC--------CCcccccccccccCcccccc-------ceecccceeeeeceeeeehhcCCCCCCccc
Q 010736 370 ITGDFGIAKFLKPDS--------SNWTGFAGTYGYIAPELAYT-------MKITEKCDVYSFGVLVLEVIKGKHPRDFLS 434 (502)
Q Consensus 370 l~~dfGl~~ll~~~~--------~~~~~~~gt~gy~aPE~~~~-------~~~s~k~Dvysfgv~llElltg~~p~~~~~ 434 (502)
..+|||+++.+.... .......||..|+|||...+ ...+.++|||||||+++||+||+.|+....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 468999998775321 11224569999999999876 567789999999999999999987753221
Q ss_pred CCCCCCCCcc---------c-----ccccccCCCCCCCC---cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 435 STSSPSLNTD---------I-----ALDEMLDPRLPVPS---CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 435 ~~~~~~~~~~---------~-----~~~~~~d~~l~~~~---~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
.......... . ...+...+.++... ....+++.++++ .|++.+|++||+++||+++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~cl~~dP~~Rps~~e~l~~L~~l 316 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIE---DCWDQDAEARLTAQXAEERMAEL 316 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHH---HHSCSSGGGSCCHHHHHHHHHHH
T ss_pred chhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHH---HHhcCChhhCcchHHHHHHHHHH
Confidence 1110000000 0 00011112222111 112234555555 99999999999999999999987
Q ss_pred c
Q 010736 498 A 498 (502)
Q Consensus 498 ~ 498 (502)
.
T Consensus 317 l 317 (336)
T 3g2f_A 317 M 317 (336)
T ss_dssp H
T ss_pred H
Confidence 4
No 178
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.37 E-value=4.3e-14 Score=135.73 Aligned_cols=123 Identities=23% Similarity=0.452 Sum_probs=72.9
Q ss_pred cccccCcccccCCC--CCCcccccccccccCccccc---cceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcc
Q 010736 370 ITGDFGIAKFLKPD--SSNWTGFAGTYGYIAPELAY---TMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTD 444 (502)
Q Consensus 370 l~~dfGl~~ll~~~--~~~~~~~~gt~gy~aPE~~~---~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~ 444 (502)
..+|||+++..... ........||..|+|||... ....+.++||||+|++++||+||+.|++...... .. ..
T Consensus 160 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~-~~ 236 (289)
T 3og7_A 160 KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD--QI-IE 236 (289)
T ss_dssp EECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH--HH-HH
T ss_pred EEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH--HH-HH
Confidence 36899999876432 12223467899999999886 5567889999999999999999999985321100 00 00
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 445 IALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 445 ~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
........+.+........+++..+++ .|++.+|++||++.||+++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 237 MVGRGSLSPDLSKVRSNCPKRMKRLMA---ECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp HHHHTSCCCCTTSSCTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred HhcccccCcchhhccccCCHHHHHHHH---HHccCChhhCCCHHHHHHHHHHHh
Confidence 000111112111111122355666666 999999999999999999999875
No 179
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.37 E-value=3.9e-14 Score=136.36 Aligned_cols=127 Identities=21% Similarity=0.311 Sum_probs=79.0
Q ss_pred cccccCcccccCCCCCC---cccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccC--------CCC
Q 010736 370 ITGDFGIAKFLKPDSSN---WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSS--------TSS 438 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~---~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~--------~~~ 438 (502)
..+|||+++........ .....++..|+|||.......+.++||||||++++||+||+.|...... ...
T Consensus 154 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~ 233 (295)
T 3ugc_A 154 KIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 233 (295)
T ss_dssp EECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCC
T ss_pred EEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccc
Confidence 36899999987543221 1234567789999999988999999999999999999999998753110 000
Q ss_pred CCCCccccccccc-CCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcCC
Q 010736 439 PSLNTDIALDEML-DPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAPS 500 (502)
Q Consensus 439 ~~~~~~~~~~~~~-d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~~ 500 (502)
...........+. ..+.+.+ ....+++.++++ .|++.+|++||+++||+++|+++...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~---~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 234 GQMIVFHLIELLKNNGRLPRP-DGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp THHHHHHHHHHHHTTCCCCCC-TTCCHHHHHHHH---HHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cchhHHHHHHHHhccCcCCCC-cCcCHHHHHHHH---HHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 0000000000011 1111111 122356666666 99999999999999999999987643
No 180
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.37 E-value=8.4e-14 Score=136.07 Aligned_cols=118 Identities=25% Similarity=0.351 Sum_probs=78.5
Q ss_pred cccccCcccccCCCCC--CcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSS--NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~--~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++....... ......|+.+|+|||......++.++||||||++++|++| |+.|+....... ... .
T Consensus 155 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~--~ 229 (325)
T 3kex_A 155 QVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPD--L 229 (325)
T ss_dssp EECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHH--H
T ss_pred EECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHH--H
Confidence 3689999998754332 2334667889999999998899999999999999999999 999985322110 000 0
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
+.....+..+ .....++..++. .|++.+|++||++.||++.|+.+.
T Consensus 230 ~~~~~~~~~~---~~~~~~~~~li~---~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 230 LEKGERLAQP---QICTIDVYMVMV---KCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp HHTTCBCCCC---TTBCTTTTHHHH---HHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred HHcCCCCCCC---CcCcHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHHH
Confidence 0000000111 011123444444 999999999999999999998864
No 181
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.37 E-value=3.5e-14 Score=136.76 Aligned_cols=124 Identities=15% Similarity=0.234 Sum_probs=82.4
Q ss_pred cccccCcccccCCCCC-------CcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSS-------NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLN 442 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~-------~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~ 442 (502)
..+|||+++....... ......||..|+|||...+...+.++||||||++++||+||+.|+............
T Consensus 151 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 230 (298)
T 1csn_A 151 YVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKY 230 (298)
T ss_dssp EECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHH
T ss_pred EEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHH
Confidence 4689999998754322 123467999999999999888999999999999999999999998642211100000
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 443 TDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 443 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
.... .....+..........+++.++++ .|++.+|++||++++|++.|+++
T Consensus 231 ~~~~-~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 231 ERIG-EKKQSTPLRELCAGFPEEFYKYMH---YARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp HHHH-HHHHHSCHHHHTTTSCHHHHHHHH---HHHHCCTTCCCCHHHHHHHHHHH
T ss_pred HHHH-hhccCccHHHHHhhCcHHHHHHHH---HHhcCCcccCCCHHHHHHHHHHH
Confidence 0000 000000000000012245666666 99999999999999999999886
No 182
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.36 E-value=2.3e-14 Score=141.33 Aligned_cols=128 Identities=16% Similarity=0.214 Sum_probs=83.1
Q ss_pred ccccccCcccccCCCC-------CCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCC
Q 010736 369 NITGDFGIAKFLKPDS-------SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSL 441 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~-------~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~ 441 (502)
-..+|||+++.+.... .......||..|+|||...+..++.++|||||||+++||+||+.|++..........
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 271 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence 3479999998774321 112345799999999999988899999999999999999999999853111100000
Q ss_pred CcccccccccCCCCC--CCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcC
Q 010736 442 NTDIALDEMLDPRLP--VPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499 (502)
Q Consensus 442 ~~~~~~~~~~d~~l~--~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~ 499 (502)
.........+.+.+. .+.....+++.++++ .|++.+|++||++.+|++.|+....
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 272 TAKTNLLDELPQSVLKWAPSGSSCCEIAQFLV---CAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHH---HHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHhhcccccHHHHhhccccccHHHHHHHHH---HHhhcCcccCCCHHHHHHHHhccCC
Confidence 000000000000000 000012245666666 9999999999999999999998654
No 183
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.36 E-value=4.9e-14 Score=133.75 Aligned_cols=119 Identities=29% Similarity=0.456 Sum_probs=81.7
Q ss_pred cccccCcccccCCCC-CCcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCccccc
Q 010736 370 ITGDFGIAKFLKPDS-SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIAL 447 (502)
Q Consensus 370 l~~dfGl~~ll~~~~-~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~~ 447 (502)
..+|||+++...... .......++..|+|||.......+.++||||+|++++||+| |+.|++..... .... .+
T Consensus 146 kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~---~~~~--~~ 220 (269)
T 4hcu_A 146 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---EVVE--DI 220 (269)
T ss_dssp EECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH--HH
T ss_pred EeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH---HHHH--HH
Confidence 368999998764321 11233556788999999998899999999999999999999 89997532110 0000 00
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcC
Q 010736 448 DEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499 (502)
Q Consensus 448 ~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~ 499 (502)
.....+..+ ....+++.++++ .|++.+|++||+++|+++.|+++..
T Consensus 221 ~~~~~~~~~---~~~~~~~~~li~---~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 221 STGFRLYKP---RLASTHVYQIMN---HCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp HTTCCCCCC---TTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcCccCCCC---CcCCHHHHHHHH---HHccCCcccCcCHHHHHHHHHHHHH
Confidence 000111111 112345666666 9999999999999999999998754
No 184
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.36 E-value=5.6e-14 Score=143.89 Aligned_cols=129 Identities=30% Similarity=0.476 Sum_probs=87.1
Q ss_pred CCCeeeecCCcc---------ccccCcccccCCCCC-CcccccccccccCccccccceecccceeeeeceeeeehhc-CC
Q 010736 359 KLGALNISRNNI---------TGDFGIAKFLKPDSS-NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GK 427 (502)
Q Consensus 359 ~L~~L~l~~N~l---------~~dfGl~~ll~~~~~-~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~ 427 (502)
++.|.||+..|| ++|||+++....... ......++..|+|||......++.++|||||||+++||+| |+
T Consensus 304 ~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~ 383 (454)
T 1qcf_A 304 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383 (454)
T ss_dssp TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCC
Confidence 455566655443 689999998753211 1223456788999999998899999999999999999999 99
Q ss_pred CCCCcccCCCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 428 ~p~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
.|+...... .... .+.. ..+++.+ ....+++..+++ .|++.+|++||+|.+|+++|+...
T Consensus 384 ~P~~~~~~~---~~~~--~i~~--~~~~~~~-~~~~~~l~~li~---~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 384 IPYPGMSNP---EVIR--ALER--GYRMPRP-ENCPEELYNIMM---RCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp CSSTTCCHH---HHHH--HHHH--TCCCCCC-TTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCCCCCHH---HHHH--HHHc--CCCCCCC-CCCCHHHHHHHH---HHccCChhHCcCHHHHHHHHHHHH
Confidence 997532110 0000 0000 0111111 122345666655 999999999999999999999874
No 185
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.36 E-value=8.4e-14 Score=132.00 Aligned_cols=119 Identities=26% Similarity=0.427 Sum_probs=81.8
Q ss_pred cccccCcccccCCCCC-CcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCccccc
Q 010736 370 ITGDFGIAKFLKPDSS-NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIAL 447 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~-~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~~ 447 (502)
..+|||+++....... ......++..|+|||.......+.++||||+|++++||+| |+.|++...... ..
T Consensus 144 ~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~ 215 (268)
T 3sxs_A 144 KVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE--------VV 215 (268)
T ss_dssp EECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH--------HH
T ss_pred EEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH--------HH
Confidence 4689999987754322 1223456778999999998899999999999999999999 999975321100 00
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcC
Q 010736 448 DEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499 (502)
Q Consensus 448 ~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~ 499 (502)
..+.............+++.++++ .|++.+|++||+++||++.|+.+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~l~~li~---~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 216 LKVSQGHRLYRPHLASDTIYQIMY---SCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp HHHHTTCCCCCCTTSCHHHHHHHH---HTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred HHHHcCCCCCCCCcChHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHhhh
Confidence 000000000001112245666666 9999999999999999999998864
No 186
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.36 E-value=1.3e-13 Score=137.87 Aligned_cols=117 Identities=27% Similarity=0.391 Sum_probs=81.4
Q ss_pred cccccCcccccCCCC--CCcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDS--SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~--~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++...... .......+|.+|+|||...+...+.++|||||||+++||+| |+.|+...... .... .
T Consensus 231 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~---~~~~--~ 305 (382)
T 3tt0_A 231 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---ELFK--L 305 (382)
T ss_dssp EECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHH--H
T ss_pred EEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH--H
Confidence 368999998775432 12234567889999999999999999999999999999999 99997522110 0000 0
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
+.+...+..+ ....+++.++++ .|++.+|++||+++||++.|+.+
T Consensus 306 ~~~~~~~~~~---~~~~~~l~~li~---~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 306 LKEGHRMDKP---SNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp HHTTCCCCCC---SSCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHcCCCCCCC---ccCCHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHH
Confidence 0011111111 112345666666 99999999999999999999886
No 187
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.35 E-value=7.7e-14 Score=137.24 Aligned_cols=118 Identities=19% Similarity=0.323 Sum_probs=81.0
Q ss_pred ccccCcccccCCCC--CCcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCccccc
Q 010736 371 TGDFGIAKFLKPDS--SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIAL 447 (502)
Q Consensus 371 ~~dfGl~~ll~~~~--~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~~ 447 (502)
.+|||+++...... .......++..|+|||......++.++||||||++++||+| |+.|+..... ....
T Consensus 215 l~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--------~~~~ 286 (343)
T 1luf_A 215 IADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH--------EEVI 286 (343)
T ss_dssp ECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHHH
T ss_pred EeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh--------HHHH
Confidence 68999998764322 11224567889999999988889999999999999999999 9999752111 0001
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcC
Q 010736 448 DEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499 (502)
Q Consensus 448 ~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~ 499 (502)
..+.+............++..+++ .|++.+|++||++.||++.|+.+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~l~~li~---~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 287 YYVRDGNILACPENCPLELYNLMR---LCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHhCCCcCCCCCCCCHHHHHHHH---HHcccCcccCCCHHHHHHHHHHHHh
Confidence 111111111111122345666666 9999999999999999999998754
No 188
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.35 E-value=1.6e-13 Score=145.49 Aligned_cols=128 Identities=25% Similarity=0.422 Sum_probs=84.2
Q ss_pred CCCCeeeecCCcc---------ccccCcccccCCCCCCc---ccccccccccCccccccceecccceeeeeceeeeehhc
Q 010736 358 PKLGALNISRNNI---------TGDFGIAKFLKPDSSNW---TGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK 425 (502)
Q Consensus 358 ~~L~~L~l~~N~l---------~~dfGl~~ll~~~~~~~---~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt 425 (502)
.++.|.||+..|| ++|||+++.+....... ....++..|+|||......++.++|||||||+++||+|
T Consensus 455 ~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt 534 (613)
T 2ozo_A 455 KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534 (613)
T ss_dssp TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 3566666666554 68999999875432211 12345678999999998999999999999999999998
Q ss_pred -CCCCCCcccCCCCCCCCcccccccccCC-CCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 426 -GKHPRDFLSSTSSPSLNTDIALDEMLDP-RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 426 -g~~p~~~~~~~~~~~~~~~~~~~~~~d~-~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
|+.|+....... . ...+... ++..+ ....+++.+++. .||+.+|++||+|.+|+++|+..
T Consensus 535 ~G~~Pf~~~~~~~---~-----~~~i~~~~~~~~p-~~~~~~l~~li~---~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 535 YGQKPYKKMKGPE---V-----MAFIEQGKRMECP-PECPPELYALMS---DCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp TSCCTTTTCCSHH---H-----HHHHHTTCCCCCC-TTCCHHHHHHHH---HTTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHH---H-----HHHHHcCCCCCCC-CcCCHHHHHHHH---HHcCCChhHCcCHHHHHHHHHHH
Confidence 999985322110 0 0001110 11111 112345666655 99999999999999999999875
No 189
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.35 E-value=1.1e-13 Score=137.84 Aligned_cols=118 Identities=26% Similarity=0.355 Sum_probs=70.9
Q ss_pred cccccCcccccCCCCC----CcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcc
Q 010736 370 ITGDFGIAKFLKPDSS----NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTD 444 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~----~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~ 444 (502)
..+|||+++.+..... ..+...++..|+|||......++.++|||||||+++||+| |+.|+....... ..
T Consensus 232 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~-- 306 (373)
T 3c1x_A 232 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---IT-- 306 (373)
T ss_dssp EECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HH--
T ss_pred EEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HH--
Confidence 4789999987643221 1234567788999999999999999999999999999999 566654321110 00
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 445 IALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 445 ~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
..+........+....+++..+++ .|++.+|++||++.||++.|+++.
T Consensus 307 ---~~~~~~~~~~~p~~~~~~l~~li~---~cl~~dp~~RPs~~ell~~L~~i~ 354 (373)
T 3c1x_A 307 ---VYLLQGRRLLQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIF 354 (373)
T ss_dssp ---HHHHTTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHHHcCCCCCCCCCCCHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHHH
Confidence 001111100011112345666666 999999999999999999999864
No 190
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.35 E-value=6.9e-14 Score=139.39 Aligned_cols=115 Identities=26% Similarity=0.443 Sum_probs=67.9
Q ss_pred cccccCcccccCCCCCC---cccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCccc
Q 010736 370 ITGDFGIAKFLKPDSSN---WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDI 445 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~---~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~ 445 (502)
..+|||+++........ .....++.+|+|||......++.++|||||||+++|++| |+.|+......
T Consensus 187 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--------- 257 (373)
T 2qol_A 187 KVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--------- 257 (373)
T ss_dssp EECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH---------
T ss_pred EECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---------
Confidence 37899999987543221 112345678999999999999999999999999999998 99997422110
Q ss_pred ccccccCC--CCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 446 ALDEMLDP--RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 446 ~~~~~~d~--~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
...+.++. +.+.+ ....+++.+++. .|++.+|++||+|.||+++|+.+
T Consensus 258 ~~~~~i~~~~~~~~~-~~~~~~l~~li~---~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 258 DVIKAVDEGYRLPPP-MDCPAALYQLML---DCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp HHHHHHHTTEECCCC-TTCBHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCC-ccccHHHHHHHH---HHhCcChhhCcCHHHHHHHHHHH
Confidence 00001111 11111 112244555554 99999999999999999999876
No 191
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.34 E-value=9.7e-11 Score=117.46 Aligned_cols=271 Identities=10% Similarity=0.038 Sum_probs=131.3
Q ss_pred cCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEccCC------------
Q 010736 86 LHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSN------------ 153 (502)
Q Consensus 86 l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N------------ 153 (502)
|...+|.++.+|+.+.|.. .++.+-..+|.++++|+.++|..+ ++..-...|.++.+|+.+.+..+
T Consensus 62 Ig~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~ 139 (394)
T 4fs7_A 62 IGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGC 139 (394)
T ss_dssp ECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTC
T ss_pred hHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecc
Confidence 3344466666666666653 255444555666666666666543 33233344555555555444322
Q ss_pred ---------cCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCcccccc
Q 010736 154 ---------QLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAI 224 (502)
Q Consensus 154 ---------~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 224 (502)
........+|..+++|+.+.+.++. .......|.++.+|+.+.+..| ++......|.++..|+.+.+..
T Consensus 140 ~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~ 217 (394)
T 4fs7_A 140 DFKEITIPEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPN 217 (394)
T ss_dssp CCSEEECCTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCT
T ss_pred cccccccCccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCC
Confidence 1111122345566666666665443 2234445666666666666554 3333344555556666555544
Q ss_pred ccccCcccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCC---------------------ccc
Q 010736 225 NQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLP---------------------QNI 282 (502)
Q Consensus 225 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~---------------------~~~ 282 (502)
+... +........+|+.+.+..+. +......+.. ..++.+.+..+.. .... ..+
T Consensus 218 ~~~~--i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~i~~~~F 293 (394)
T 4fs7_A 218 SLYY--LGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVIVPEKTF 293 (394)
T ss_dssp TCCE--ECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTC-EECSCTTTTCTTCCEEEECSSEECTTTT
T ss_pred CceE--eehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcc-eeeccccccccccceeccCceeeccccc
Confidence 3221 11122223344444433211 1011111111 2344444433221 1112 234
Q ss_pred cCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCe
Q 010736 283 CRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGA 362 (502)
Q Consensus 283 ~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 362 (502)
....+|+.+.+..+ ++..-...|.++.+|+.+++.. .++.....+|..+.+|+.+++..| +...-..+|..|++|+.
T Consensus 294 ~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~-~v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~ 370 (394)
T 4fs7_A 294 YGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPY-LVEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKK 370 (394)
T ss_dssp TTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCE
T ss_pred cccccccccccccc-cceechhhhcCCCCCCEEEeCC-cccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCE
Confidence 44555666665433 3333344566666666666643 355444556666666776666554 54444556666666776
Q ss_pred eeecC
Q 010736 363 LNISR 367 (502)
Q Consensus 363 L~l~~ 367 (502)
+++..
T Consensus 371 i~lp~ 375 (394)
T 4fs7_A 371 VELPK 375 (394)
T ss_dssp EEEEG
T ss_pred EEECC
Confidence 66654
No 192
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.34 E-value=7.8e-14 Score=139.27 Aligned_cols=116 Identities=26% Similarity=0.402 Sum_probs=79.5
Q ss_pred cccccCcccccCCCCCC--cccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSSN--WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~--~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
.++|||+++........ .....++..|+|||......++.++|||||||+++||+| |+.|+...... .
T Consensus 253 kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~---------~ 323 (377)
T 3cbl_A 253 KISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ---------Q 323 (377)
T ss_dssp EECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH---------H
T ss_pred EECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---------H
Confidence 36899999875432111 111235678999999998999999999999999999999 99997532110 0
Q ss_pred cccccC--CCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 447 LDEMLD--PRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 447 ~~~~~d--~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
..+.+. .+++.+ ....+++.++++ .|++.+|++||++.||+++|+.++
T Consensus 324 ~~~~~~~~~~~~~~-~~~~~~l~~li~---~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 324 TREFVEKGGRLPCP-ELCPDAVFRLME---QCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp HHHHHHTTCCCCCC-TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCC-CCCCHHHHHHHH---HHcCCCchhCcCHHHHHHHHHHHH
Confidence 000010 111111 112345666666 999999999999999999999874
No 193
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.34 E-value=8.7e-14 Score=136.01 Aligned_cols=117 Identities=26% Similarity=0.422 Sum_probs=78.4
Q ss_pred cccccCcccccCCCCCC---cccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCccc
Q 010736 370 ITGDFGIAKFLKPDSSN---WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDI 445 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~---~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~ 445 (502)
..+|||+++........ .....+|..|+|||......++.++||||||++++||+| |+.|+...... .
T Consensus 191 kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~ 262 (325)
T 3kul_A 191 KVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--------D 262 (325)
T ss_dssp EECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--------H
T ss_pred EECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--------H
Confidence 46899999987543221 123446778999999998999999999999999999999 99997421110 0
Q ss_pred ccccccCC-CCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 446 ALDEMLDP-RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 446 ~~~~~~d~-~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
....+... ..+.+ ....+++.++++ .|++.+|++||+|.||+++|+.+.
T Consensus 263 ~~~~~~~~~~~~~~-~~~~~~l~~li~---~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 263 VISSVEEGYRLPAP-MGCPHALHQLML---DCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp HHHHHHTTCCCCCC-TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCC-CCcCHHHHHHHH---HHccCChhhCcCHHHHHHHHHHHH
Confidence 00111110 11111 112345666665 999999999999999999999873
No 194
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.34 E-value=1.5e-13 Score=140.67 Aligned_cols=128 Identities=29% Similarity=0.458 Sum_probs=81.8
Q ss_pred CCCeeeecCCcc---------ccccCcccccCCCCC-CcccccccccccCccccccceecccceeeeeceeeeehhc-CC
Q 010736 359 KLGALNISRNNI---------TGDFGIAKFLKPDSS-NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GK 427 (502)
Q Consensus 359 ~L~~L~l~~N~l---------~~dfGl~~ll~~~~~-~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~ 427 (502)
++.|.||+..|+ ++|||+++....... ......++..|+|||......++.++|||||||+++||+| |+
T Consensus 300 ~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~ 379 (452)
T 1fmk_A 300 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379 (452)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCC
Confidence 455556655443 689999988754321 1224457789999999998899999999999999999999 99
Q ss_pred CCCCcccCCCCCCCCcccccccccC-CCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 428 HPRDFLSSTSSPSLNTDIALDEMLD-PRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 428 ~p~~~~~~~~~~~~~~~~~~~~~~d-~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
.|+...... .....+.. .+.+.+ ....+++.++++ .|++.+|++||++.+|+++|+...
T Consensus 380 ~P~~~~~~~--------~~~~~i~~~~~~~~~-~~~~~~l~~li~---~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 380 VPYPGMVNR--------EVLDQVERGYRMPCP-PECPESLHDLMC---QCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp CSSTTCCHH--------HHHHHHHTTCCCCCC-TTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred CCCCCCCHH--------HHHHHHHcCCCCCCC-CCCCHHHHHHHH---HHccCChhhCcCHHHHHHHHHHHh
Confidence 997522110 00001100 011111 122345666665 999999999999999999999874
No 195
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.34 E-value=1.5e-13 Score=131.27 Aligned_cols=117 Identities=21% Similarity=0.353 Sum_probs=70.3
Q ss_pred cccccCcccccCCCCC-CcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCccccc
Q 010736 370 ITGDFGIAKFLKPDSS-NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIAL 447 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~-~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~~ 447 (502)
..+|||+++....... ......++..|+|||.......+.++||||||++++||+| |+.|++..... . ..
T Consensus 156 kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~---~-----~~ 227 (281)
T 1mp8_A 156 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---D-----VI 227 (281)
T ss_dssp EECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---G-----HH
T ss_pred EECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH---H-----HH
Confidence 3689999987754322 1223456788999999988889999999999999999997 99997532111 0 00
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 448 DEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 448 ~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
..+.............+++..+++ .|++.+|++||++.||++.|+.+
T Consensus 228 ~~i~~~~~~~~~~~~~~~l~~li~---~~l~~~p~~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 228 GRIENGERLPMPPNCPPTLYSLMT---KCWAYDPSRRPRFTELKAQLSTI 274 (281)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHH---HHccCChhhCcCHHHHHHHHHHH
Confidence 111111100001112345666666 99999999999999999999876
No 196
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.34 E-value=1.8e-13 Score=130.75 Aligned_cols=118 Identities=21% Similarity=0.340 Sum_probs=78.7
Q ss_pred cccccCcccccCCCCC-CcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCccccc
Q 010736 370 ITGDFGIAKFLKPDSS-NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIAL 447 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~-~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~~ 447 (502)
..+|||+++....... ......++.+|+|||.......+.++||||||++++||+| |+.|+....... ... .+
T Consensus 153 kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~--~~ 227 (281)
T 3cc6_A 153 KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIG--VL 227 (281)
T ss_dssp EECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHH--HH
T ss_pred EeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHH--HH
Confidence 4789999987754322 2233557889999999988889999999999999999999 999975321110 000 00
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 448 DEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 448 ~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
.....+..+ ....+++..+++ .|++.+|++||++.||++.|+.+.
T Consensus 228 ~~~~~~~~~---~~~~~~l~~li~---~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 228 EKGDRLPKP---DLCPPVLYTLMT---RCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp HHTCCCCCC---TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCCCCCC---CCCCHHHHHHHH---HHccCCchhCcCHHHHHHHHHHHH
Confidence 000001111 112345666666 999999999999999999998763
No 197
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.34 E-value=1.5e-13 Score=136.98 Aligned_cols=117 Identities=11% Similarity=0.055 Sum_probs=76.7
Q ss_pred ccccccCcccccCCCCCCcccccccccccCcccccc--ceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccc
Q 010736 369 NITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT--MKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~--~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~ 446 (502)
-..+|||+++...... ....+|..|+|||.... ..++.++|||||||+++||+||+.|+..........+.. ..
T Consensus 233 ~kL~DFG~a~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~-~~ 308 (371)
T 3q60_A 233 LMLGDVSALWKVGTRG---PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKR-PS 308 (371)
T ss_dssp EEECCGGGEEETTCEE---EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCB-CC
T ss_pred EEEEecceeeecCCCc---cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhh-hh
Confidence 3479999998764321 13456799999999987 789999999999999999999999986432211111110 00
Q ss_pred cccccCCCCCCC-CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 447 LDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 447 ~~~~~d~~l~~~-~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
...........+ .....+++..+++ .|++.+|++||++.|+++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 309 LRVPGTDSLAFGSCTPLPDFVKTLIG---RFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TTSCCCCSCCCTTSSCCCHHHHHHHH---HHTCSSTTTCCCHHHHTT
T ss_pred hhhccccccchhhccCCCHHHHHHHH---HHcCCChhhCCCHHHHhc
Confidence 000011111100 0122356666766 999999999999999864
No 198
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.34 E-value=1.3e-13 Score=140.98 Aligned_cols=114 Identities=23% Similarity=0.361 Sum_probs=79.0
Q ss_pred ccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCccccccc
Q 010736 371 TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
++|||+++...... ....++..|+|||......++.++|||||||+++||+| |+.|+...... .... .+..
T Consensus 330 l~DfG~a~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~---~~~~--~i~~ 401 (450)
T 1k9a_A 330 VSDFGLTKEASSTQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVP--RVEK 401 (450)
T ss_dssp ECCCTTCEECC---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT---THHH--HHHT
T ss_pred EeeCCCcccccccc---cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH--HHHc
Confidence 68999998654321 22357789999999999999999999999999999999 99998532211 1100 0000
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
-..+..+ .....++.++++ .||+.+|++||++.|+++.|+.+.
T Consensus 402 ~~~~~~p---~~~~~~l~~li~---~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 402 GYKMDAP---DGCPPAVYDVMK---NCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp TCCCCCC---TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCC---CcCCHHHHHHHH---HHcCCChhHCcCHHHHHHHHHHHH
Confidence 0111111 122356666666 999999999999999999999864
No 199
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.34 E-value=1.7e-13 Score=134.02 Aligned_cols=118 Identities=27% Similarity=0.430 Sum_probs=74.8
Q ss_pred cccccCcccccCCCCC--CcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSS--NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~--~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++....... ......++..|+|||...+..++.++|||||||+++||+| |+.|++...... ... .
T Consensus 157 kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~--~ 231 (327)
T 3lzb_A 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISS--I 231 (327)
T ss_dssp EECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH--H
T ss_pred EEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHH--H
Confidence 3689999988754322 2223456778999999999999999999999999999999 999985321110 000 0
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
+.. ....+.+ .....++..+++ .|++.+|++||++.|+++.|+.+.
T Consensus 232 ~~~--~~~~~~~-~~~~~~l~~li~---~~l~~dp~~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 232 LEK--GERLPQP-PICTIDVYMIMR---KCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp HHT--TCCCCCC-TTBCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHc--CCCCCCC-ccCCHHHHHHHH---HHcCCChhHCcCHHHHHHHHHHHH
Confidence 000 0011111 112345666666 999999999999999999999864
No 200
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.33 E-value=1.4e-13 Score=135.68 Aligned_cols=113 Identities=27% Similarity=0.468 Sum_probs=72.0
Q ss_pred ccccCcccccCCCCC--CcccccccccccCcccccc-----------ceecccceeeeeceeeeehhcCCCCCCcccCCC
Q 010736 371 TGDFGIAKFLKPDSS--NWTGFAGTYGYIAPELAYT-----------MKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS 437 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~--~~~~~~gt~gy~aPE~~~~-----------~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~ 437 (502)
.+|||+++....... ......||.+|+|||.... ..++.++|||||||+++||+||+.|++....
T Consensus 148 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-- 225 (343)
T 3dbq_A 148 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-- 225 (343)
T ss_dssp ECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS--
T ss_pred EeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh--
Confidence 689999998754332 2234679999999999865 6788999999999999999999999853111
Q ss_pred CCCCCcccccccccCCCCCCC-CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHH
Q 010736 438 SPSLNTDIALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQ 493 (502)
Q Consensus 438 ~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~ 493 (502)
.......++++..... .....+++..+++ .|++.+|++||++.||++.
T Consensus 226 -----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 226 -----QISKLHAIIDPNHEIEFPDIPEKDLQDVLK---CCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp -----HHHHHHHHHCTTSCCCCCCCSCHHHHHHHH---HHTCSSTTTSCCHHHHHTS
T ss_pred -----HHHHHHHHhcCCcccCCcccCCHHHHHHHH---HHcCCChhHCCCHHHHHhC
Confidence 0011122233222110 1112245556665 9999999999999999753
No 201
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.33 E-value=1.9e-13 Score=133.30 Aligned_cols=117 Identities=18% Similarity=0.285 Sum_probs=73.7
Q ss_pred cccccCcccccCCCCC--CcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSS--NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~--~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++....... ......++..|+|||.......+.++||||||++++||+| |+.|++..... ..
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~~ 248 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--------EI 248 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------GH
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--------HH
Confidence 3689999987654321 1223456788999999998889999999999999999999 89997532111 00
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
...+.............+++..+++ .|++.+|++||++.|+++.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~l~~~ 296 (323)
T 3qup_A 249 YNYLIGGNRLKQPPECMEEVYDLMY---QCWSADPKQRPSFTCLRMELENI 296 (323)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHH---HTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCccCHHHHHHHH---HHccCChhhCcCHHHHHHHHHHH
Confidence 0111111110011112245666666 99999999999999999999986
No 202
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.33 E-value=1.7e-13 Score=131.29 Aligned_cols=117 Identities=26% Similarity=0.487 Sum_probs=79.6
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccc--ccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELA--YTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIAL 447 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~--~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~ 447 (502)
..+|||+++.... ......|+..|+|||.. .....+.++||||+|++++||+||+.|++........ .. ....
T Consensus 169 kl~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~-~~~~ 243 (287)
T 4f0f_A 169 KVADFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK-FI-NMIR 243 (287)
T ss_dssp EECCCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHH-HH-HHHH
T ss_pred EeCCCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHH-HH-HHHh
Confidence 3689999875432 23446789999999998 4566889999999999999999999998532211000 00 0000
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 448 DEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 448 ~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
..-..+.++. ...+++..+++ .|++.+|++||++.||+++|+++
T Consensus 244 ~~~~~~~~~~---~~~~~l~~li~---~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 244 EEGLRPTIPE---DCPPRLRNVIE---LCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HSCCCCCCCT---TSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ccCCCCCCCc---ccCHHHHHHHH---HHhcCChhhCcCHHHHHHHHHhC
Confidence 1112222221 12355666666 99999999999999999999863
No 203
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.33 E-value=1.7e-13 Score=141.80 Aligned_cols=115 Identities=27% Similarity=0.475 Sum_probs=81.0
Q ss_pred ccccCcccccCCCCC-CcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccccc
Q 010736 371 TGDFGIAKFLKPDSS-NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALD 448 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~-~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~~~ 448 (502)
++|||+++....... ......++..|+|||......++.++|||||||+++||+| |+.|+...... . +.
T Consensus 359 l~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~---~------~~ 429 (495)
T 1opk_A 359 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---Q------VY 429 (495)
T ss_dssp ECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---G------HH
T ss_pred EeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH---H------HH
Confidence 689999998754321 1223456788999999998999999999999999999999 99997532110 0 01
Q ss_pred cccCC--CCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 449 EMLDP--RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 449 ~~~d~--~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
+.+.. +...+ ....+++.++++ .|++.+|++||+|.||+++|+.+.
T Consensus 430 ~~~~~~~~~~~~-~~~~~~l~~li~---~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 430 ELLEKDYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp HHHHTTCCCCCC-TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HHHHcCCCCCCC-CCCCHHHHHHHH---HHcCcChhHCcCHHHHHHHHHHHH
Confidence 11111 11111 122345666665 999999999999999999998863
No 204
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.33 E-value=1.6e-13 Score=146.01 Aligned_cols=129 Identities=26% Similarity=0.401 Sum_probs=85.5
Q ss_pred CCCCeeeecCCcc---------ccccCcccccCCCCC---CcccccccccccCccccccceecccceeeeeceeeeehhc
Q 010736 358 PKLGALNISRNNI---------TGDFGIAKFLKPDSS---NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK 425 (502)
Q Consensus 358 ~~L~~L~l~~N~l---------~~dfGl~~ll~~~~~---~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt 425 (502)
.++.|.||+..|| ++|||+++.+..... ..+...++..|+|||......++.++|||||||+++||+|
T Consensus 488 ~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt 567 (635)
T 4fl3_A 488 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567 (635)
T ss_dssp TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHh
Confidence 3566667766554 689999998754322 1233456788999999999899999999999999999999
Q ss_pred -CCCCCCcccCCCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 426 -GKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 426 -g~~p~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
|+.|+....... ... .+.....+..+ ....+++.++++ .|++.+|++||++.+|+++|+..
T Consensus 568 ~G~~Pf~~~~~~~---~~~--~i~~~~~~~~p---~~~~~~l~~li~---~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 568 YGQKPYRGMKGSE---VTA--MLEKGERMGCP---AGCPREMYDLMN---LCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp TTCCSSTTCCHHH---HHH--HHHTTCCCCCC---TTCCHHHHHHHH---HHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHH---HHH--HHHcCCCCCCC---CCCCHHHHHHHH---HHcCCCHhHCcCHHHHHHHHHHH
Confidence 999975321100 000 00010111111 122356666666 99999999999999999999875
No 205
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.33 E-value=9.9e-14 Score=135.34 Aligned_cols=114 Identities=24% Similarity=0.362 Sum_probs=79.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............||.+|+|||......++.++|||||||+++||+||+.|+...... ... ..+.+
T Consensus 181 kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~---~~~--~~~~~ 255 (321)
T 2c30_A 181 KLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV---QAM--KRLRD 255 (321)
T ss_dssp EECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHH--HHHHH
T ss_pred EEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHH--HHHhc
Confidence 4789999988765443444567999999999999889999999999999999999999997531110 000 01111
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
...+.+... ....+++..+++ .|++.+|++||++.||++
T Consensus 256 ~~~~~~~~~-~~~~~~l~~li~---~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 256 SPPPKLKNS-HKVSPVLRDFLE---RMLVRDPQERATAQELLD 294 (321)
T ss_dssp SSCCCCTTG-GGSCHHHHHHHH---HHSCSSTTTSCCHHHHHT
T ss_pred CCCCCcCcc-ccCCHHHHHHHH---HHccCChhhCcCHHHHhc
Confidence 122222111 112345666666 999999999999999976
No 206
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.33 E-value=4.7e-14 Score=136.04 Aligned_cols=115 Identities=23% Similarity=0.360 Sum_probs=79.8
Q ss_pred ccccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccc
Q 010736 369 NITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALD 448 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~ 448 (502)
-..+|||+++.............||..|+|||......++.++||||+||+++||+||+.|+....... ... .+.
T Consensus 155 ~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~--~~~ 229 (297)
T 3fxz_A 155 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR---ALY--LIA 229 (297)
T ss_dssp EEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHH--HHH
T ss_pred EEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHH--HHH
Confidence 347899999887655544556789999999999999899999999999999999999999974211000 000 000
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 449 EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 449 ~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
....+.+..+ ....+++..+++ .|++.+|++||+++|+++
T Consensus 230 ~~~~~~~~~~-~~~~~~~~~li~---~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 230 TNGTPELQNP-EKLSAIFRDFLN---RCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HHCSCCCSCG-GGSCHHHHHHHH---HHSCSSTTTSCCHHHHTT
T ss_pred hCCCCCCCCc-cccCHHHHHHHH---HHccCChhHCcCHHHHhh
Confidence 0011111111 112245666666 999999999999999975
No 207
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.33 E-value=1.1e-13 Score=134.09 Aligned_cols=122 Identities=24% Similarity=0.356 Sum_probs=72.2
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............|+..|+|||.......+.++||||||++++||+||+.|+...... ...... .+..
T Consensus 176 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~--~~~~ 252 (310)
T 2wqm_A 176 KLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCK--KIEQ 252 (310)
T ss_dssp EECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC-HHHHHH--HHHT
T ss_pred EEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh-HHHHHH--Hhhc
Confidence 3689999987754433333457899999999999888999999999999999999999997421100 000000 0011
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcC
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~ 499 (502)
...+.... ....+++.++++ .|++.+|++||++.||++.|+.+++
T Consensus 253 ~~~~~~~~--~~~~~~l~~li~---~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 253 CDYPPLPS--DHYSEELRQLVN---MCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp TCSCCCCT--TTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCCCCcc--cccCHHHHHHHH---HHcCCChhhCCCHHHHHHHHHHHHH
Confidence 11111111 112345666666 9999999999999999999998743
No 208
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.32 E-value=1.8e-13 Score=137.25 Aligned_cols=113 Identities=27% Similarity=0.453 Sum_probs=73.7
Q ss_pred cccccCcccccCCCCC--CcccccccccccCcccccc-----------ceecccceeeeeceeeeehhcCCCCCCcccCC
Q 010736 370 ITGDFGIAKFLKPDSS--NWTGFAGTYGYIAPELAYT-----------MKITEKCDVYSFGVLVLEVIKGKHPRDFLSST 436 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~--~~~~~~gt~gy~aPE~~~~-----------~~~s~k~Dvysfgv~llElltg~~p~~~~~~~ 436 (502)
.++|||+++.+..... ......||..|+|||.... ..++.++|||||||+++||+||+.|++....
T Consensus 194 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~- 272 (390)
T 2zmd_A 194 KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN- 272 (390)
T ss_dssp EECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-
T ss_pred EEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-
Confidence 3699999998754322 1234679999999999865 3688999999999999999999999853110
Q ss_pred CCCCCCcccccccccCCCCCCC-CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 437 SSPSLNTDIALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 437 ~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.......++++..... .....+++..+++ .|++.+|++||++.||++
T Consensus 273 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 273 ------QISKLHAIIDPNHEIEFPDIPEKDLQDVLK---CCLKRDPKQRISIPELLA 320 (390)
T ss_dssp ------HHHHHHHHHCTTSCCCCCCCSCHHHHHHHH---HHTCSSTTTSCCHHHHHT
T ss_pred ------HHHHHHHHhCccccCCCCccchHHHHHHHH---HHcccChhhCCCHHHHhh
Confidence 0011222333322110 0111245556665 999999999999999975
No 209
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.32 E-value=1.6e-13 Score=133.16 Aligned_cols=120 Identities=26% Similarity=0.320 Sum_probs=75.8
Q ss_pred cccccCcccccCCCCC--CcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSS--NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~--~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++....... ......++..|+|||......++.++||||||++++||+| |+.|+...... ..
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~----- 258 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH---EM----- 258 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GH-----
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH---HH-----
Confidence 3689999987643321 1223457789999999998889999999999999999999 88887532111 00
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcCC
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAPS 500 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~~ 500 (502)
...+.............+++..+++ .|++.+|++||++.|+++.|+.+..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 259 YDYLLHGHRLKQPEDCLDELYEIMY---SCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp HHHHHTTCCCCCBTTCCHHHHHHHH---HTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCccccHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 0111111110011112245666666 99999999999999999999987543
No 210
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.32 E-value=1.4e-13 Score=136.88 Aligned_cols=117 Identities=25% Similarity=0.353 Sum_probs=79.7
Q ss_pred cccccCcccccCCC--CCCcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPD--SSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~--~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++.+... ........||..|+|||......++.++|||||||+++||+| |+.|+...... ..
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--------~~ 295 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--------EV 295 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HH
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HH
Confidence 36899999865321 112223567889999999988899999999999999999998 99997532110 00
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
...+.............+++.++++ .|++.+|++||++.||++.|+.+
T Consensus 296 ~~~i~~~~~~~~~~~~~~~l~~li~---~~l~~dP~~Rps~~eil~~l~~~ 343 (367)
T 3l9p_A 296 LEFVTSGGRMDPPKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYC 343 (367)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCccCCHHHHHHHH---HHcCCCHhHCcCHHHHHHHHHHH
Confidence 0011111000011112245556655 99999999999999999999876
No 211
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.31 E-value=3.2e-13 Score=131.02 Aligned_cols=117 Identities=25% Similarity=0.377 Sum_probs=80.9
Q ss_pred cccccCcccccCCCCCC--cccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSSN--WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~--~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++........ .....++..|+|||...+...+.++||||+|++++||+| |+.|+...... .... .
T Consensus 190 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---~~~~--~ 264 (314)
T 2ivs_A 190 KISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE---RLFN--L 264 (314)
T ss_dssp EECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHH--H
T ss_pred EEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH--H
Confidence 46899999877543221 223456788999999998899999999999999999999 99997532111 0000 0
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
+.....+..+ ....+++..+++ .|++.+|++||++.||++.|+++
T Consensus 265 ~~~~~~~~~~---~~~~~~~~~li~---~~l~~dp~~Rps~~~l~~~l~~~ 309 (314)
T 2ivs_A 265 LKTGHRMERP---DNCSEEMYRLML---QCWKQEPDKRPVFADISKDLEKM 309 (314)
T ss_dssp HHTTCCCCCC---TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hhcCCcCCCC---ccCCHHHHHHHH---HHccCChhhCcCHHHHHHHHHHH
Confidence 0000111111 112345666666 99999999999999999999875
No 212
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.31 E-value=1.7e-13 Score=132.89 Aligned_cols=119 Identities=25% Similarity=0.365 Sum_probs=81.5
Q ss_pred cccccCcccccCCCCCC--cccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSSN--WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~--~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++........ .....|+..|+|||.......+.++||||||++++||+| |+.|+...... .... ..
T Consensus 185 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~-~~ 260 (313)
T 1t46_A 185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD---SKFY-KM 260 (313)
T ss_dssp EECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS---HHHH-HH
T ss_pred EEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch---hHHH-HH
Confidence 36899999877544321 123456788999999988899999999999999999999 99997532110 0000 00
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
..+...+..+ ....+++..+++ .|++.+|++||++.||+++|+...
T Consensus 261 ~~~~~~~~~~---~~~~~~l~~li~---~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 261 IKEGFRMLSP---EHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp HHHTCCCCCC---TTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hccCCCCCCc---ccCCHHHHHHHH---HHcCCCchhCcCHHHHHHHHHHHH
Confidence 0111111111 112345666666 999999999999999999998763
No 213
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.31 E-value=9.6e-14 Score=131.77 Aligned_cols=116 Identities=27% Similarity=0.486 Sum_probs=73.1
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++....... ....|+.+|+|||...+...+.++||||||++++|++||+.|+....... .... ....
T Consensus 156 kl~Dfg~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~~-~~~~ 229 (271)
T 3dtc_A 156 KITDFGLAREWHRTTK--MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA---VAYG-VAMN 229 (271)
T ss_dssp EECCCCC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH---HHHH-HHTS
T ss_pred EEccCCcccccccccc--cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHh-hhcC
Confidence 3689999987654322 24578999999999998889999999999999999999999975321100 0000 0000
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
-.....+ ....+++.++++ .|++.+|++||++.||+++|+.+
T Consensus 230 ~~~~~~~---~~~~~~~~~li~---~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 230 KLALPIP---STCPEPFAKLME---DCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CCCCCCC---TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CCCCCCC---cccCHHHHHHHH---HHhcCCcccCcCHHHHHHHHhcC
Confidence 0111111 112345666666 99999999999999999999763
No 214
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.30 E-value=1.6e-13 Score=141.00 Aligned_cols=124 Identities=16% Similarity=0.261 Sum_probs=82.3
Q ss_pred cccccCcccccCCCCCC-------cccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSN-------WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLN 442 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~-------~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~ 442 (502)
.++|||+++........ .....||..|+|||...+..++.++|||||||+++||+||+.|++...........
T Consensus 146 kL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~ 225 (483)
T 3sv0_A 146 YIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKY 225 (483)
T ss_dssp EECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHH
T ss_pred EEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHH
Confidence 37899999987543221 12467999999999999999999999999999999999999998643221100000
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 443 TDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 443 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
.... ...+...+........+++..+++ .|++.+|++||+|.+|+++|+.+
T Consensus 226 ~~i~-~~~~~~~~~~l~~~~p~~l~~li~---~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 226 EKIS-EKKVATSIEALCRGYPTEFASYFH---YCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHHH-HHHHHSCHHHHHTTSCHHHHHHHH---HHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHh-hccccccHHHHhcCCcHHHHHHHH---HHhcCChhhCcCHHHHHHHHHHH
Confidence 0000 000000000000011245555555 99999999999999999999886
No 215
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.30 E-value=2.2e-13 Score=130.13 Aligned_cols=117 Identities=27% Similarity=0.461 Sum_probs=80.0
Q ss_pred cccccCcccccCCCC-CCcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCccccc
Q 010736 370 ITGDFGIAKFLKPDS-SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIAL 447 (502)
Q Consensus 370 l~~dfGl~~ll~~~~-~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~~ 447 (502)
..+|||+++...... .......++..|+|||.......+.++||||+|++++||+| |+.|++...... .. ..+
T Consensus 160 kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~---~~--~~~ 234 (283)
T 3gen_A 160 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE---TA--EHI 234 (283)
T ss_dssp EECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HH--HHH
T ss_pred EEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH---HH--HHH
Confidence 368999998764321 11223456788999999998889999999999999999999 999975321100 00 000
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 448 DEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 448 ~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
.+...+..+ ....+++.++++ .|++.+|++||+++|+++.|+++
T Consensus 235 ~~~~~~~~~---~~~~~~l~~li~---~~l~~~p~~Rps~~~ll~~L~~~ 278 (283)
T 3gen_A 235 AQGLRLYRP---HLASEKVYTIMY---SCWHEKADERPTFKILLSNILDV 278 (283)
T ss_dssp HTTCCCCCC---TTCCHHHHHHHH---HTTCSSGGGSCCHHHHHHHHHHH
T ss_pred hcccCCCCC---CcCCHHHHHHHH---HHccCChhHCcCHHHHHHHHHHH
Confidence 111111111 112245666666 99999999999999999999876
No 216
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.30 E-value=3.1e-13 Score=129.47 Aligned_cols=117 Identities=25% Similarity=0.380 Sum_probs=81.5
Q ss_pred cccccCcccccCCCCCC---cccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCccc
Q 010736 370 ITGDFGIAKFLKPDSSN---WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDI 445 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~---~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~ 445 (502)
..+|||+++........ .....++..|+|||.......+.++||||||++++||+| |+.|+...... ....
T Consensus 150 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~-- 224 (287)
T 1u59_A 150 KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMA-- 224 (287)
T ss_dssp EECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---HHHH--
T ss_pred EECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH---HHHH--
Confidence 46899999887543221 123456789999999988899999999999999999999 99997532110 0000
Q ss_pred ccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 446 ALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 446 ~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
.+.....+..+ ....+++..+++ .|++.+|++||++.||++.|+.+
T Consensus 225 ~i~~~~~~~~~---~~~~~~l~~li~---~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 225 FIEQGKRMECP---PECPPELYALMS---DCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp HHHTTCCCCCC---TTCCHHHHHHHH---HTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHhcCCcCCCC---CCcCHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHH
Confidence 00000111111 122356666666 99999999999999999999886
No 217
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.30 E-value=3.4e-13 Score=129.49 Aligned_cols=117 Identities=27% Similarity=0.405 Sum_probs=79.7
Q ss_pred cccccCcccccCCCCCC---cccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCccc
Q 010736 370 ITGDFGIAKFLKPDSSN---WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDI 445 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~---~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~ 445 (502)
..+|||+++........ .....++..|+|||.......+.++||||||++++||+| |+.|+....... ...
T Consensus 157 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~-- 231 (291)
T 1xbb_A 157 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VTA-- 231 (291)
T ss_dssp EECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHH--
T ss_pred EEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHH--
Confidence 46899999877543321 122346788999999998899999999999999999999 999975321100 000
Q ss_pred ccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 446 ALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 446 ~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
.+.....+..+ ....+++..+++ .|++.+|++||++.||+++|+..
T Consensus 232 ~~~~~~~~~~~---~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 232 MLEKGERMGCP---AGCPREMYDLMN---LCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp HHHTTCCCCCC---TTCCHHHHHHHH---HHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHcCCCCCCC---CCCCHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHH
Confidence 00000111111 112355666666 99999999999999999999875
No 218
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.30 E-value=3.8e-13 Score=128.19 Aligned_cols=115 Identities=22% Similarity=0.340 Sum_probs=74.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALD 448 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~~~ 448 (502)
..+|||+++...... ....++..|+|||...+...+.++||||||++++||+| |+.|+...... .... .+.
T Consensus 157 ~l~Dfg~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---~~~~--~~~ 228 (278)
T 1byg_A 157 KVSDFGLTKEASSTQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVP--RVE 228 (278)
T ss_dssp EECCCCC---------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---GHHH--HHT
T ss_pred EEeeccccccccccc---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH--HHh
Confidence 468999987654322 23457889999999988889999999999999999999 99997532110 0000 000
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 449 EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 449 ~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
.-..+..+ ....+++..+++ .|++.+|++||++.|+++.|++++
T Consensus 229 ~~~~~~~~---~~~~~~l~~li~---~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 229 KGYKMDAP---DGCPPAVYEVMK---NCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp TTCCCCCC---TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCCCc---ccCCHHHHHHHH---HHhcCChhhCCCHHHHHHHHHHHH
Confidence 11111111 122356666766 999999999999999999999874
No 219
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.30 E-value=3.5e-13 Score=130.86 Aligned_cols=119 Identities=25% Similarity=0.347 Sum_probs=81.0
Q ss_pred cccccCcccccCCCCCC--cccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSSN--WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~--~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++........ .....||.+|+|||...+...+.++||||||++++||+| |+.|+....... .... .
T Consensus 188 kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~~--~ 263 (316)
T 2xir_A 188 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCR--R 263 (316)
T ss_dssp EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH--HHHH--H
T ss_pred EECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH--HHHH--H
Confidence 36899999877543321 223557889999999988889999999999999999999 999975321100 0000 0
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
......+..+ .....++..++. .|++.+|++||++.||++.|+.+.
T Consensus 264 ~~~~~~~~~~---~~~~~~l~~li~---~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 264 LKEGTRMRAP---DYTTPEMYQTML---DCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp HHHTCCCCCC---TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hccCccCCCC---CCCCHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHHH
Confidence 0010111111 112245556655 999999999999999999998863
No 220
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.30 E-value=1.6e-13 Score=131.60 Aligned_cols=119 Identities=26% Similarity=0.452 Sum_probs=79.6
Q ss_pred cccccCcccccCCCCCC---cccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCccc
Q 010736 370 ITGDFGIAKFLKPDSSN---WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDI 445 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~---~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~ 445 (502)
..+|||+++........ .....++..|+|||.......+.++||||||++++||+| |+.|+...... .
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~ 232 (291)
T 1u46_A 161 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--------Q 232 (291)
T ss_dssp EECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------H
T ss_pred EEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--------H
Confidence 46899999887543321 123457788999999998889999999999999999999 99997532110 0
Q ss_pred cccccc--CCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcCC
Q 010736 446 ALDEML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAPS 500 (502)
Q Consensus 446 ~~~~~~--d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~~ 500 (502)
....+. ....+.+ ....+++..+++ .|++.+|++||++.|+++.|++.++.
T Consensus 233 ~~~~~~~~~~~~~~~-~~~~~~l~~li~---~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 233 ILHKIDKEGERLPRP-EDCPQDIYNVMV---QCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp HHHHHHTSCCCCCCC-TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred HHHHHHccCCCCCCC-cCcCHHHHHHHH---HHccCCcccCcCHHHHHHHHHHhCcc
Confidence 000110 0011111 112345666666 99999999999999999999988663
No 221
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.29 E-value=2e-13 Score=129.16 Aligned_cols=119 Identities=29% Similarity=0.456 Sum_probs=80.6
Q ss_pred cccccCcccccCCCC-CCcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCccccc
Q 010736 370 ITGDFGIAKFLKPDS-SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIAL 447 (502)
Q Consensus 370 l~~dfGl~~ll~~~~-~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~~ 447 (502)
..+|||+++...... .......++..|+|||.......+.++||||+|++++||+| |+.|+...... .... .+
T Consensus 144 kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~--~i 218 (267)
T 3t9t_A 144 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---EVVE--DI 218 (267)
T ss_dssp EECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH--HH
T ss_pred EEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH---HHHH--HH
Confidence 368999998764321 11223456788999999988889999999999999999999 89997531110 0000 00
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcC
Q 010736 448 DEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499 (502)
Q Consensus 448 ~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~ 499 (502)
..-..+..+ ....+++.++++ .|++.+|++||++.|+++.|+++..
T Consensus 219 ~~~~~~~~~---~~~~~~l~~li~---~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 219 STGFRLYKP---RLASTHVYQIMN---HCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HTTCCCCCC---TTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcCCcCCCC---ccCcHHHHHHHH---HHccCChhhCcCHHHHHHHHHHHHh
Confidence 000011111 112245666666 9999999999999999999998754
No 222
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.29 E-value=2.6e-13 Score=132.97 Aligned_cols=118 Identities=25% Similarity=0.390 Sum_probs=80.2
Q ss_pred cccccCcccccCCCCCC--cccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSSN--WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~--~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++........ .....|+.+|+|||...+...+.++||||||++++||+| |+.|++..... ..... .
T Consensus 204 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---~~~~~-~ 279 (333)
T 2i1m_A 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN---SKFYK-L 279 (333)
T ss_dssp EBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS---HHHHH-H
T ss_pred EECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh---HHHHH-H
Confidence 37899999876443221 123456789999999988889999999999999999999 89997532110 00000 0
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
..+...+..+ ....+++..+++ .|++.+|++||++.||++.|++.
T Consensus 280 ~~~~~~~~~~---~~~~~~l~~li~---~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 280 VKDGYQMAQP---AFAPKNIYSIMQ---ACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp HHHTCCCCCC---TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HhcCCCCCCC---CCCCHHHHHHHH---HHhccChhhCcCHHHHHHHHHHH
Confidence 0111111111 112245666666 99999999999999999999875
No 223
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.29 E-value=7.5e-14 Score=136.70 Aligned_cols=119 Identities=13% Similarity=0.190 Sum_probs=81.3
Q ss_pred cccccCcccccCCCCCC-------cccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSN-------WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLN 442 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~-------~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~ 442 (502)
..+|||+++........ .....||..|+|||...+...+.++|||||||+++||+||+.|+..........
T Consensus 150 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~-- 227 (330)
T 2izr_A 150 HIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKE-- 227 (330)
T ss_dssp EECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHH--
T ss_pred EEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHH--
Confidence 47899999976432211 235679999999999999889999999999999999999999986432111000
Q ss_pred cccccccccCCCCCCC----CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 443 TDIALDEMLDPRLPVP----SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 443 ~~~~~~~~~d~~l~~~----~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
....+.+.....+ ..... ++..+++ .|++.+|++||++.+|++.|+++
T Consensus 228 ---~~~~i~~~~~~~~~~~~~~~~p-~~~~li~---~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 228 ---RYQKIGDTKRATPIEVLCENFP-EMATYLR---YVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp ---HHHHHHHHHHHSCHHHHTTTCH-HHHHHHH---HHHHCCTTCCCCHHHHHHHHHHH
T ss_pred ---HHHHHHhhhccCCHHHHhccCh-HHHHHHH---HHHhCCCCCCCCHHHHHHHHHHH
Confidence 0000100000000 00112 5555655 99999999999999999999875
No 224
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.29 E-value=4.4e-13 Score=131.41 Aligned_cols=116 Identities=28% Similarity=0.446 Sum_probs=73.4
Q ss_pred cccccCcccccCCCCC---CcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCccc
Q 010736 370 ITGDFGIAKFLKPDSS---NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDI 445 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~---~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~ 445 (502)
..+|||+++....... ......++..|+|||.......+.++||||||++++||+| |+.|+...... .
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--------~ 258 (333)
T 1mqb_A 187 KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--------E 258 (333)
T ss_dssp EECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------H
T ss_pred EECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--------H
Confidence 3689999988754322 1123346778999999988889999999999999999999 99997421110 0
Q ss_pred ccccccCC-CCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 446 ALDEMLDP-RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 446 ~~~~~~d~-~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
....+.+. +.+.+ ....+++.++++ .|++.+|++||++.||+++|+.+
T Consensus 259 ~~~~~~~~~~~~~~-~~~~~~l~~li~---~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 259 VMKAINDGFRLPTP-MDCPSAIYQLMM---QCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp HHHHHHTTCCCCCC-TTCBHHHHHHHH---HHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHCCCcCCCc-ccCCHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHH
Confidence 00111111 11111 112245556655 99999999999999999999876
No 225
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.29 E-value=7.7e-13 Score=127.29 Aligned_cols=119 Identities=24% Similarity=0.325 Sum_probs=79.5
Q ss_pred cccccCcccccCCCC----CCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccc
Q 010736 370 ITGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDI 445 (502)
Q Consensus 370 l~~dfGl~~ll~~~~----~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~ 445 (502)
..+|||+++...... .......++..|+|||...+...+.++||||||++++||+||+.|...... ......
T Consensus 164 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~--~~~~~~-- 239 (298)
T 3pls_A 164 KVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID--PFDLTH-- 239 (298)
T ss_dssp EECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--GGGHHH--
T ss_pred EeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC--HHHHHH--
Confidence 368999998664321 122345678899999999999999999999999999999997666321110 000000
Q ss_pred ccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 446 ALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 446 ~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
..........+ ....+++.++++ .|++.+|++||+++|++++|+++.
T Consensus 240 ~~~~~~~~~~~---~~~~~~l~~li~---~~l~~~p~~Rps~~~ll~~l~~~~ 286 (298)
T 3pls_A 240 FLAQGRRLPQP---EYCPDSLYQVMQ---QCWEADPAVRPTFRVLVGEVEQIV 286 (298)
T ss_dssp HHHTTCCCCCC---TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhhcCCCCCCC---ccchHHHHHHHH---HHccCChhhCcCHHHHHHHHHHHH
Confidence 00000111111 112345666666 999999999999999999999863
No 226
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.29 E-value=5.9e-13 Score=135.54 Aligned_cols=115 Identities=24% Similarity=0.336 Sum_probs=79.6
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............||.+|+|||......++.++||||+||+++||+||+.|+...... ...... ...
T Consensus 153 kL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~---~~~~~i-~~~ 228 (444)
T 3soa_A 153 KLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH---RLYQQI-KAG 228 (444)
T ss_dssp EECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHH-HHT
T ss_pred EEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH---HHHHHH-HhC
Confidence 3689999988766555555678999999999999888999999999999999999999997421100 000000 000
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
..+...+.. ....+++..+++ .|++.+|++||++.|+++
T Consensus 229 ~~~~~~~~~-~~~s~~~~~li~---~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 229 AYDFPSPEW-DTVTPEAKDLIN---KMLTINPSKRITAAEALK 267 (444)
T ss_dssp CCCCCTTTT-TTSCHHHHHHHH---HHSCSSTTTSCCHHHHHH
T ss_pred CCCCCcccc-ccCCHHHHHHHH---HHcCCChhHCCCHHHHhc
Confidence 011100000 112355666776 999999999999999875
No 227
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.29 E-value=3.8e-14 Score=140.84 Aligned_cols=134 Identities=15% Similarity=0.156 Sum_probs=70.2
Q ss_pred CCCCEEECCCCcccccCCccCcC-----CCCCCEEEccCCcCcCCCCccc-CCCCCCcEEEccCCcCcccCCccc-----
Q 010736 95 PHLAYLDLRDNKLFGTIPPQISN-----LTNLSILSLGGNQFSGNIPHEV-GLMSHLKILYIDSNQLDGSIPLEV----- 163 (502)
Q Consensus 95 ~~L~~L~Ls~N~l~g~~p~~l~~-----l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~p~~~----- 163 (502)
+.|++|+|++|.++......+.. .++|++|+|++|.++......+ ..+++|++|+|++|+++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 45677777777776433333222 2567777777777653322222 234566777777776654332222
Q ss_pred CCCCCCcEEEcccCccccc----CCcCCCCCCCCCeEEccccccccc----CCccCcCCccCCcccccccccc
Q 010736 164 GQLSSMVELALFSNNLNGS----VPHSLGNLTQISMLFLHDNSFSGF----IPPDIGNLKSISILSLAINQFS 228 (502)
Q Consensus 164 ~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~ 228 (502)
...++|++|+|++|.++.. ++..+..+++|++|+|++|.++.. ++..+...++|+.|++++|.++
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 2345666666666666431 222334455666666666665532 1223334444555555555544
No 228
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.28 E-value=3.5e-13 Score=140.73 Aligned_cols=129 Identities=29% Similarity=0.459 Sum_probs=87.4
Q ss_pred CCCeeeecCCcc---------ccccCcccccCCCCC-CcccccccccccCccccccceecccceeeeeceeeeehhc-CC
Q 010736 359 KLGALNISRNNI---------TGDFGIAKFLKPDSS-NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GK 427 (502)
Q Consensus 359 ~L~~L~l~~N~l---------~~dfGl~~ll~~~~~-~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~ 427 (502)
++.|.||+..|| ++|||+++....... ......++..|+|||......++.++|||||||+++||+| |+
T Consensus 383 ~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~ 462 (535)
T 2h8h_A 383 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 462 (535)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 455666655444 689999987753211 1123456788999999998899999999999999999999 89
Q ss_pred CCCCcccCCCCCCCCcccccccccCC-CCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcC
Q 010736 428 HPRDFLSSTSSPSLNTDIALDEMLDP-RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499 (502)
Q Consensus 428 ~p~~~~~~~~~~~~~~~~~~~~~~d~-~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~ 499 (502)
.|+...... .....+... ++..+ ....+++.++++ .|++.+|++||++.+|+++|+....
T Consensus 463 ~P~~~~~~~--------~~~~~i~~~~~~~~~-~~~~~~l~~li~---~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 463 VPYPGMVNR--------EVLDQVERGYRMPCP-PECPESLHDLMC---QCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp CSSTTCCHH--------HHHHHHHTTCCCCCC-TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred CCCCCCCHH--------HHHHHHHcCCCCCCC-CCCCHHHHHHHH---HHcCCChhHCcCHHHHHHHHHHHhh
Confidence 997532110 000011000 11111 112345666666 9999999999999999999998743
No 229
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.28 E-value=2.9e-13 Score=133.00 Aligned_cols=129 Identities=19% Similarity=0.260 Sum_probs=79.6
Q ss_pred ccccccCcccccCCCCC----CcccccccccccCccccccc------eecccceeeeeceeeeehhcC----------CC
Q 010736 369 NITGDFGIAKFLKPDSS----NWTGFAGTYGYIAPELAYTM------KITEKCDVYSFGVLVLEVIKG----------KH 428 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~~----~~~~~~gt~gy~aPE~~~~~------~~s~k~Dvysfgv~llElltg----------~~ 428 (502)
-..+|||+++....... ......||..|+|||..... ..+.++|||||||+++||+|| +.
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~ 265 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 265 (342)
T ss_dssp EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccccc
Confidence 34789999987754332 12345789999999998765 455789999999999999999 44
Q ss_pred CCCcccCCCCC-CCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 429 PRDFLSSTSSP-SLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 429 p~~~~~~~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
|+......... .............+.++... ...+....+.++...|++.+|++||++.||++.|+.+.
T Consensus 266 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~ 335 (342)
T 1b6c_B 266 PYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335 (342)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG-GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred CccccCcCcccHHHHHHHHHHHHhCCCCcccc-cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 54321110000 00000001111223322110 11123334445555999999999999999999999874
No 230
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.28 E-value=2e-13 Score=134.33 Aligned_cols=120 Identities=23% Similarity=0.331 Sum_probs=82.1
Q ss_pred cccccCcccccCCCCCC--cccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSSN--WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~--~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++........ .....||.+|+|||.......+.++||||||++++||+| |+.|+....... .... .
T Consensus 212 kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~~-~ 287 (344)
T 1rjb_A 212 KICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA---NFYK-L 287 (344)
T ss_dssp EECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH---HHHH-H
T ss_pred EeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH---HHHH-H
Confidence 47899999877543321 123457789999999988889999999999999999999 999975321110 0000 0
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcC
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~ 499 (502)
...-..+..+ ....+++..+++ .|++.+|++||++.||++.|+....
T Consensus 288 ~~~~~~~~~~---~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 288 IQNGFKMDQP---FYATEEIYIIMQ---SCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp HHTTCCCCCC---TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HhcCCCCCCC---CCCCHHHHHHHH---HHcCCCchhCcCHHHHHHHHHHHHH
Confidence 0111111111 112355666666 9999999999999999999998744
No 231
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.28 E-value=1.9e-13 Score=131.79 Aligned_cols=113 Identities=23% Similarity=0.346 Sum_probs=75.6
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccce---ecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMK---ITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~---~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++.............||..|+|||...... .+.++|||||||+++||+||+.|+...... .+.....
T Consensus 177 kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---~~~~~~~ 253 (298)
T 2zv2_A 177 KIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM---CLHSKIK 253 (298)
T ss_dssp EECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH
T ss_pred EEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH---HHHHHHh
Confidence 4789999988765443344567999999999987654 478899999999999999999997521100 0000000
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.... ..+.. ....+++..+++ .|++.+|++||++.||++
T Consensus 254 -~~~~--~~~~~-~~~~~~l~~li~---~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 254 -SQAL--EFPDQ-PDIAEDLKDLIT---RMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp -HCCC--CCCSS-SCCCHHHHHHHH---HHTCSCTTTSCCHHHHTT
T ss_pred -cccC--CCCCc-cccCHHHHHHHH---HHhhcChhhCCCHHHHhc
Confidence 0000 11111 112355666666 999999999999999864
No 232
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.28 E-value=1.1e-12 Score=128.72 Aligned_cols=110 Identities=18% Similarity=0.252 Sum_probs=76.1
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccccccee-cccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKI-TEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALD 448 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~-s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~ 448 (502)
..+|||+++....... .....||..|+|||...+... +.++||||+||+++||+||+.|++....... .......
T Consensus 148 kl~DFG~s~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~---~~~i~~~ 223 (336)
T 3h4j_B 148 KIADFGLSNIMTDGNF-LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL---FKKVNSC 223 (336)
T ss_dssp EECCSSCTBTTTTSBT-TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC---BCCCCSS
T ss_pred EEEEeccceeccCCcc-cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH---HHHHHcC
Confidence 3789999987754332 234579999999999987765 6899999999999999999999864221111 1100000
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 449 EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 449 ~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
...++ .....++..+++ .|++.+|++||++.|+++
T Consensus 224 ---~~~~p---~~~s~~~~~li~---~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 224 ---VYVMP---DFLSPGAQSLIR---RMIVADPMQRITIQEIRR 258 (336)
T ss_dssp ---CCCCC---TTSCHHHHHHHH---TTSCSSGGGSCCHHHHTT
T ss_pred ---CCCCc---ccCCHHHHHHHH---HHcCCChhHCcCHHHHHh
Confidence 01111 112245666776 999999999999999865
No 233
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.28 E-value=4.2e-13 Score=127.96 Aligned_cols=117 Identities=28% Similarity=0.437 Sum_probs=80.5
Q ss_pred cccccCcccccCCCCC-CcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCccccc
Q 010736 370 ITGDFGIAKFLKPDSS-NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIAL 447 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~-~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~~ 447 (502)
..+|||+++....... ......++..|+|||.......+.++||||||++++||+| |+.|+...... .... .+
T Consensus 149 kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~--~~ 223 (279)
T 1qpc_A 149 KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP---EVIQ--NL 223 (279)
T ss_dssp EECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHH--HH
T ss_pred EECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH---HHHH--HH
Confidence 4689999988754321 1223456788999999988889999999999999999999 89997531110 0000 00
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 448 DEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 448 ~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
..-..+..+ ....+++.++++ .|++.+|++||++.+++++|++.
T Consensus 224 ~~~~~~~~~---~~~~~~l~~li~---~~l~~~p~~Rps~~~l~~~l~~~ 267 (279)
T 1qpc_A 224 ERGYRMVRP---DNCPEELYQLMR---LCWKERPEDRPTFDYLRSVLEDF 267 (279)
T ss_dssp HTTCCCCCC---TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hcccCCCCc---ccccHHHHHHHH---HHhccChhhCCCHHHHHHHHHHH
Confidence 000111111 122355666666 99999999999999999999886
No 234
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.28 E-value=7.1e-13 Score=127.62 Aligned_cols=119 Identities=25% Similarity=0.338 Sum_probs=77.9
Q ss_pred cccccCcccccCCCC----CCcccccccccccCccccccceecccceeeeeceeeeehhcCCC-CCCcccCCCCCCCCcc
Q 010736 370 ITGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH-PRDFLSSTSSPSLNTD 444 (502)
Q Consensus 370 l~~dfGl~~ll~~~~----~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~-p~~~~~~~~~~~~~~~ 444 (502)
..+|||+++...... ...+...++..|+|||...+...+.++||||+|++++|++||+. |+...... ...
T Consensus 168 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~---~~~-- 242 (298)
T 3f66_A 168 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---DIT-- 242 (298)
T ss_dssp EECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT---THH--
T ss_pred EECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH---HHH--
Confidence 368999998764322 12234567889999999998899999999999999999999555 44321111 000
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcC
Q 010736 445 IALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499 (502)
Q Consensus 445 ~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~ 499 (502)
..+.............+++.++++ .|++.+|++||++.|++++|+++..
T Consensus 243 ---~~~~~~~~~~~~~~~~~~l~~li~---~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 243 ---VYLLQGRRLLQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp ---HHHHTTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHHhcCCCCCCCccCCHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHHHH
Confidence 000000000001112345666666 9999999999999999999998743
No 235
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.28 E-value=1.7e-13 Score=135.53 Aligned_cols=122 Identities=15% Similarity=0.190 Sum_probs=82.7
Q ss_pred cccccCcccccCCCCC-------CcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSS-------NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLN 442 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~-------~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~ 442 (502)
..+|||+++.+..... ......||..|+|||...+..++.++|||||||+++||+||+.|+....... ....
T Consensus 201 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~ 279 (352)
T 2jii_A 201 TLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT-EDIM 279 (352)
T ss_dssp EECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-HHHH
T ss_pred EEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH-HHHH
Confidence 4689999987753211 1234578999999999998899999999999999999999999986432110 0000
Q ss_pred cc-----cccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 443 TD-----IALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 443 ~~-----~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
.. ....+..++.... ....+++.++++ .|++.+|++||++.||+++|+.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~L~~~ 334 (352)
T 2jii_A 280 KQKQKFVDKPGPFVGPCGHW--IRPSETLQKYLK---VVMALTYEEKPPYAMLRNNLEAL 334 (352)
T ss_dssp HHHHHHHHSCCCEECTTSCE--ECCCHHHHHHHH---HHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHhccCChhhhhhhcccc--CCCcHHHHHHHH---HHHhCChhhCCCHHHHHHHHHHH
Confidence 00 0001111111100 012356666666 99999999999999999999986
No 236
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.27 E-value=6.2e-13 Score=133.13 Aligned_cols=114 Identities=28% Similarity=0.476 Sum_probs=75.3
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCC-cccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLN-TDIALD 448 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~-~~~~~~ 448 (502)
..+|||+++.............||..|+|||...+..++.++|+||+||+++||+||+.|++........... .+....
T Consensus 193 kL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~ 272 (396)
T 4dc2_A 193 KLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 272 (396)
T ss_dssp EECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHH
T ss_pred EEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHH
Confidence 3689999987443333345678999999999999999999999999999999999999998643221111000 000111
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCH
Q 010736 449 EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487 (502)
Q Consensus 449 ~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m 487 (502)
.+....+.-+. ....++..+++ .|++.+|++||+.
T Consensus 273 ~i~~~~~~~p~-~~s~~~~~li~---~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 273 VILEKQIRIPR-SLSVKAASVLK---SFLNKDPKERLGC 307 (396)
T ss_dssp HHHHCCCCCCT-TSCHHHHHHHH---HHTCSCTTTSTTC
T ss_pred HHhccccCCCC-cCCHHHHHHHH---HHhcCCHhHcCCC
Confidence 12222221111 12345667777 9999999999985
No 237
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.27 E-value=6.5e-13 Score=127.17 Aligned_cols=117 Identities=25% Similarity=0.419 Sum_probs=81.0
Q ss_pred cccccCcccccCCCCC-CcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCccccc
Q 010736 370 ITGDFGIAKFLKPDSS-NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIAL 447 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~-~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~~ 447 (502)
..+|||+++....... ......++..|+|||.......+.++||||+|++++||+| |+.|+...... .... .+
T Consensus 151 ~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~---~~~~--~~ 225 (288)
T 3kfa_A 151 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYE--LL 225 (288)
T ss_dssp EECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHH--HH
T ss_pred EEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH--HH
Confidence 3689999988754332 1223456788999999998899999999999999999999 89987532111 0000 00
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 448 DEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 448 ~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
.....+..+ ....+++.++++ .|++.+|++||++.||+++|+..
T Consensus 226 ~~~~~~~~~---~~~~~~l~~li~---~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 226 EKDYRMERP---EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp HTTCCCCCC---TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hccCCCCCC---CCCCHHHHHHHH---HHhCCChhhCcCHHHHHHHHHHH
Confidence 111111111 112355666666 99999999999999999999875
No 238
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.27 E-value=2.8e-13 Score=130.75 Aligned_cols=124 Identities=22% Similarity=0.325 Sum_probs=81.5
Q ss_pred cccccCcccccCCCCC---CcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccC------CCCCC
Q 010736 370 ITGDFGIAKFLKPDSS---NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSS------TSSPS 440 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~---~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~------~~~~~ 440 (502)
..+|||+++....... ......||..|+|||...+...+.++||||+|++++||+||+.|...... .....
T Consensus 166 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 245 (302)
T 4e5w_A 166 KIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHG 245 (302)
T ss_dssp EECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCG
T ss_pred EECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCccc
Confidence 4689999988765432 12245678889999999999999999999999999999999998532100 00000
Q ss_pred CCccccc-ccccCC-CCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 441 LNTDIAL-DEMLDP-RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 441 ~~~~~~~-~~~~d~-~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
....... ..+... ....+ ....+++..+++ .|++.+|++||++.||+++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 246 QMTVTRLVNTLKEGKRLPCP-PNCPDEVYQLMR---KCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp GGHHHHHHHHHHTTCCCCCC-TTCCHHHHHHHH---HTTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHhccCCCCCC-CCCCHHHHHHHH---HHcCCCCCCCCCHHHHHHHHHHH
Confidence 0000000 001110 11111 122355666666 99999999999999999999875
No 239
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.27 E-value=2.8e-13 Score=131.76 Aligned_cols=120 Identities=18% Similarity=0.264 Sum_probs=76.2
Q ss_pred cccccCcccccCCC-----CCCcccccccccccCcccccc---------ceecccceeeeeceeeeehhcCCCCCCcccC
Q 010736 370 ITGDFGIAKFLKPD-----SSNWTGFAGTYGYIAPELAYT---------MKITEKCDVYSFGVLVLEVIKGKHPRDFLSS 435 (502)
Q Consensus 370 l~~dfGl~~ll~~~-----~~~~~~~~gt~gy~aPE~~~~---------~~~s~k~Dvysfgv~llElltg~~p~~~~~~ 435 (502)
..+|||+++..... ........|+.+|+|||.... ..++.++||||||++++||+||+.|++....
T Consensus 169 ~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~ 248 (319)
T 2y4i_B 169 VITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA 248 (319)
T ss_dssp EECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH
T ss_pred EEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 46899998765321 112234568999999999864 3478899999999999999999999753211
Q ss_pred CCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcC
Q 010736 436 TSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~ 499 (502)
. .... ....-..+..... ...+++..+++ .|++.+|++||++.||+++|+.+..
T Consensus 249 ~---~~~~--~~~~~~~~~~~~~--~~~~~l~~li~---~~l~~~p~~Rpt~~~l~~~l~~l~~ 302 (319)
T 2y4i_B 249 E---AIIW--QMGTGMKPNLSQI--GMGKEISDILL---FCWAFEQEERPTFTKLMDMLEKLPK 302 (319)
T ss_dssp H---HHHH--HHHTTCCCCCCCS--SCCTTHHHHHH---HHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred H---HHHH--HhccCCCCCCCcC--CCCHHHHHHHH---HHhcCChhhCcCHHHHHHHHHHHHH
Confidence 0 0000 0011111221111 11234555555 9999999999999999999998753
No 240
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.27 E-value=7.7e-14 Score=133.01 Aligned_cols=118 Identities=29% Similarity=0.398 Sum_probs=78.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............|+..|+|||.......+.++||||||++++||+||+.|+...... .... .+.+
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~--~i~~ 230 (279)
T 2w5a_A 156 KLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK---ELAG--KIRE 230 (279)
T ss_dssp EECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH--HHHH
T ss_pred EEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH---HHHH--HHhh
Confidence 4689999987754332223456899999999998888999999999999999999999997532110 0000 0000
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
..-+.++ ....+++.++++ .|++.+|++||++.||++.+....
T Consensus 231 ~~~~~~~---~~~~~~l~~li~---~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 231 GKFRRIP---YRYSDELNEIIT---RMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp TCCCCCC---TTSCHHHHHHHH---HHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred cccccCC---cccCHHHHHHHH---HHcCCCcccCCCHHHHHhChhhhh
Confidence 0111121 112355666666 999999999999999988765543
No 241
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.27 E-value=4.4e-13 Score=131.45 Aligned_cols=117 Identities=27% Similarity=0.391 Sum_probs=80.6
Q ss_pred cccccCcccccCCCCC--CcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSS--NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~--~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++....... ......++..|+|||...+...+.++||||||++++||+| |+.|+...... .... .
T Consensus 197 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~--~ 271 (334)
T 2pvf_A 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---ELFK--L 271 (334)
T ss_dssp EECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHH--H
T ss_pred EEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH---HHHH--H
Confidence 4789999987754321 1223456788999999988889999999999999999999 99997532110 0000 0
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
+.....+..+ .....++..+++ .|++.+|++||++.||++.|+.+
T Consensus 272 ~~~~~~~~~~---~~~~~~l~~li~---~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 272 LKEGHRMDKP---ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp HHHTCCCCCC---TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HhcCCCCCCC---ccCCHHHHHHHH---HHccCChhhCcCHHHHHHHHHHH
Confidence 0000111111 112245666666 99999999999999999999886
No 242
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.26 E-value=8e-13 Score=132.11 Aligned_cols=61 Identities=30% Similarity=0.432 Sum_probs=49.3
Q ss_pred ccccCcccccCCC----CCCcccccccccccCccccccc-eecccceeeeeceeeeehhcCCCCCC
Q 010736 371 TGDFGIAKFLKPD----SSNWTGFAGTYGYIAPELAYTM-KITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 371 ~~dfGl~~ll~~~----~~~~~~~~gt~gy~aPE~~~~~-~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
++|||+++.+... ....+...||..|+|||...+. .++.++||||+||+++||+||+.|+.
T Consensus 199 i~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~ 264 (398)
T 4b99_A 199 IGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFP 264 (398)
T ss_dssp ECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSC
T ss_pred EeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCC
Confidence 6999999987432 1223457899999999987765 46899999999999999999999985
No 243
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.26 E-value=7.4e-13 Score=129.65 Aligned_cols=114 Identities=20% Similarity=0.197 Sum_probs=63.8
Q ss_pred cccccCcccccCCCCCC------------cccccccccccCcccc---ccceecccceeeeeceeeeehhcCCCCCCccc
Q 010736 370 ITGDFGIAKFLKPDSSN------------WTGFAGTYGYIAPELA---YTMKITEKCDVYSFGVLVLEVIKGKHPRDFLS 434 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~------------~~~~~gt~gy~aPE~~---~~~~~s~k~Dvysfgv~llElltg~~p~~~~~ 434 (502)
..+|||+++........ .....||..|+|||.. ....++.++|||||||+++||+||+.|++...
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 257 (337)
T 3ll6_A 178 KLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA 257 (337)
T ss_dssp EBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred EEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchh
Confidence 47899999887542211 1134588999999998 56678899999999999999999999985321
Q ss_pred CCCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 435 STSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 435 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
... ... ........ .....++..+++ .|++.+|++||++.||++.|+.+
T Consensus 258 ~~~---~~~-----~~~~~~~~---~~~~~~~~~li~---~~l~~~p~~Rps~~e~l~~l~~~ 306 (337)
T 3ll6_A 258 KLR---IVN-----GKYSIPPH---DTQYTVFHSLIR---AMLQVNPEERLSIAEVVHQLQEI 306 (337)
T ss_dssp ----------------CCCCTT---CCSSGGGHHHHH---HHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HHH---hhc-----CcccCCcc---cccchHHHHHHH---HHccCChhhCcCHHHHHHHHHHH
Confidence 110 000 00000000 011133455555 99999999999999999999886
No 244
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.26 E-value=6e-13 Score=129.63 Aligned_cols=118 Identities=21% Similarity=0.304 Sum_probs=80.2
Q ss_pred cccccCcccccCCCCCC--cccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSSN--WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~--~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++........ .....++..|+|||...+...+.++||||+|++++||+| |+.|+...... ..
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~ 249 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--------QV 249 (322)
T ss_dssp EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--------HH
T ss_pred EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH--------HH
Confidence 46899999876432211 122346788999999988889999999999999999999 88887532110 00
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
...+.............+++..+++ .|++.+|++||++.||++.|++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 250 LRFVMEGGLLDKPDNCPDMLFELMR---MCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred HHHHHcCCcCCCCCCCCHHHHHHHH---HHcCCCcccCcCHHHHHHHHHHhh
Confidence 0111111111111122345666666 999999999999999999998863
No 245
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.25 E-value=4.6e-13 Score=130.85 Aligned_cols=126 Identities=23% Similarity=0.287 Sum_probs=81.8
Q ss_pred ccccccCcccccCCCCC---CcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCC-----CC-C
Q 010736 369 NITGDFGIAKFLKPDSS---NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSST-----SS-P 439 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~~---~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~-----~~-~ 439 (502)
-..+|||+++....... ......|+..|+|||...+...+.++||||+|++++||+||+.|+...... .. .
T Consensus 166 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~ 245 (327)
T 3lxl_A 166 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCER 245 (327)
T ss_dssp EEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC---
T ss_pred EEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhccccc
Confidence 34789999998754332 122345788899999999889999999999999999999999996421100 00 0
Q ss_pred CCCcccccccccCCCC-CCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 440 SLNTDIALDEMLDPRL-PVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 440 ~~~~~~~~~~~~d~~l-~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
.........+.+.... ........+++.++++ .|++.+|++||++.||++.|+.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dP~~Rps~~ell~~L~~~ 301 (327)
T 3lxl_A 246 DVPALSRLLELLEEGQRLPAPPACPAEVHELMK---LCWAPSPQDRPSFSALGPQLDML 301 (327)
T ss_dssp -CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHC
T ss_pred ccccHHHHHHHhhcccCCCCCCcccHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHH
Confidence 0000000011111111 0001122345666666 99999999999999999999986
No 246
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.25 E-value=6e-13 Score=132.81 Aligned_cols=103 Identities=13% Similarity=0.125 Sum_probs=72.3
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccc-----------eecccceeeeeceeeeehhcCCCCCCcccCCCC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTM-----------KITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSS 438 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~-----------~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~ 438 (502)
..+|||+++.... ..+...| .+|+|||..... .++.++|||||||+++||+||+.|+........
T Consensus 246 kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~ 321 (377)
T 3byv_A 246 FLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGG 321 (377)
T ss_dssp EECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CC
T ss_pred EEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccc
Confidence 4799999986432 2234567 999999999887 899999999999999999999999753221111
Q ss_pred CCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 439 PSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 439 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
...+.. ... ...+++..+++ .|++.+|++||++.|+++
T Consensus 322 --------~~~~~~-~~~----~~~~~~~~li~---~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 322 --------SEWIFR-SCK----NIPQPVRALLE---GFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp --------SGGGGS-SCC----CCCHHHHHHHH---HHTCSSGGGCCCHHHHHT
T ss_pred --------hhhhhh-hcc----CCCHHHHHHHH---HHcCCCchhCCCHHHHhh
Confidence 011111 111 12245666666 999999999999999875
No 247
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.25 E-value=9.7e-13 Score=132.32 Aligned_cols=117 Identities=26% Similarity=0.325 Sum_probs=73.0
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCC-CCCcccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSP-SLNTDIALD 448 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~-~~~~~~~~~ 448 (502)
.++|||+++...... ..+...||..|+|||......++.++|||||||+++||+||+.|+......... .........
T Consensus 204 kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~ 282 (400)
T 1nxk_A 204 KLTDFGFAKETTSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 282 (400)
T ss_dssp EECCCTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHT
T ss_pred EEEecccccccCCCC-ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcC
Confidence 378999998765322 234567899999999999889999999999999999999999998533221110 000000000
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 449 EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 449 ~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
....+. ... ....+++..+++ .|++.+|++||++.||++
T Consensus 283 ~~~~~~-~~~-~~~s~~~~~li~---~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 283 QYEFPN-PEW-SEVSEEVKMLIR---NLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp CCCCCT-TTT-TTSCHHHHHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred cccCCC-ccc-ccCCHHHHHHHH---HHCCCChhHCcCHHHHhc
Confidence 110010 000 112356667777 999999999999999976
No 248
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.25 E-value=5.5e-13 Score=126.32 Aligned_cols=101 Identities=24% Similarity=0.400 Sum_probs=69.1
Q ss_pred cccccccccCccccccceec---ccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccccccCCCCCCCCcchHHH
Q 010736 389 GFAGTYGYIAPELAYTMKIT---EKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEK 465 (502)
Q Consensus 389 ~~~gt~gy~aPE~~~~~~~s---~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 465 (502)
...||..|+|||.......+ .++||||||++++||+||+.|++...... ... ........+.++. ...++
T Consensus 167 ~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~-~~~~~~~~~~~~~---~~~~~ 239 (271)
T 3kmu_A 167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME---IGM-KVALEGLRPTIPP---GISPH 239 (271)
T ss_dssp TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH---HHH-HHHHSCCCCCCCT---TCCHH
T ss_pred CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH---HHH-HHHhcCCCCCCCC---CCCHH
Confidence 35688999999998765444 47999999999999999999975321100 000 0001111222221 12345
Q ss_pred HHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcC
Q 010736 466 LISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499 (502)
Q Consensus 466 ~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~ 499 (502)
+.++++ .|++.+|++||+++||++.|++++.
T Consensus 240 ~~~li~---~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 240 VSKLMK---ICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHH---HHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHH---HHcCCChhhCcCHHHHHHHHHHhhc
Confidence 666666 9999999999999999999998753
No 249
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.24 E-value=1.6e-12 Score=125.83 Aligned_cols=119 Identities=23% Similarity=0.254 Sum_probs=77.2
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCC-------------
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSST------------- 436 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~------------- 436 (502)
..+|||+++...... ..+...||..|+|||......++.++||||+||+++||+||+.|+......
T Consensus 160 kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 238 (308)
T 3g33_A 160 KLADFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 238 (308)
T ss_dssp EECSCSCTTTSTTCC-CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred EEeeCccccccCCCc-ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 368999998775433 234567899999999998888999999999999999999999998521100
Q ss_pred CCCCCCccccc-ccccCCCCCCC----CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 437 SSPSLNTDIAL-DEMLDPRLPVP----SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 437 ~~~~~~~~~~~-~~~~d~~l~~~----~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
....|...... ...+.+..+.+ .....+++.++++ .|++.+|++||++.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLL---EMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHH---HHTCSSTTTSCCHHHHHT
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHH---HHhcCCCccCCCHHHHhc
Confidence 00011100000 00011110000 0012245556666 999999999999999875
No 250
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.24 E-value=4.1e-13 Score=132.08 Aligned_cols=117 Identities=23% Similarity=0.328 Sum_probs=78.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............||..|+|||......++.++||||+||+++||+||+.|+..........+........
T Consensus 160 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~ 239 (342)
T 2qr7_A 160 RICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK 239 (342)
T ss_dssp EECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCC
T ss_pred EEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCC
Confidence 36899999987654444445678999999999988889999999999999999999999985321110000000000000
Q ss_pred c-cCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 M-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~-~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
. ...... ....+++..+++ .|++.+|++||++.||++
T Consensus 240 ~~~~~~~~---~~~s~~~~~li~---~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 240 FSLSGGYW---NSVSDTAKDLVS---KMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp CCCCSTTT---TTSCHHHHHHHH---HHTCSSTTTSCCHHHHTT
T ss_pred cccCcccc---ccCCHHHHHHHH---HHCCCChhHCcCHHHHhc
Confidence 0 000010 112356667777 999999999999999865
No 251
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.24 E-value=9.7e-13 Score=129.59 Aligned_cols=114 Identities=28% Similarity=0.470 Sum_probs=74.6
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCC-cccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLN-TDIALD 448 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~-~~~~~~ 448 (502)
..+|||+++.............||..|+|||......++.++|+||+||+++||+||+.|++........... ......
T Consensus 150 kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 229 (345)
T 3a8x_A 150 KLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 229 (345)
T ss_dssp EECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHH
T ss_pred EEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHH
Confidence 3689999987543333344578999999999999888999999999999999999999998643221111000 000011
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCH
Q 010736 449 EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487 (502)
Q Consensus 449 ~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m 487 (502)
.+......-+ .....++..+++ .|++.+|++||+.
T Consensus 230 ~i~~~~~~~p-~~~s~~~~~li~---~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 230 VILEKQIRIP-RSLSVKAASVLK---SFLNKDPKERLGC 264 (345)
T ss_dssp HHHHCCCCCC-TTSCHHHHHHHH---HHTCSSTTTSTTC
T ss_pred HHHcCCCCCC-CCCCHHHHHHHH---HHhcCCHhHCCCC
Confidence 1111111111 112345666766 9999999999995
No 252
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.24 E-value=4.9e-13 Score=129.15 Aligned_cols=113 Identities=27% Similarity=0.441 Sum_probs=78.8
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............|+..|+|||.......+.++||||||++++||+||+.|+....... .. ..+..
T Consensus 159 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~--~~~~~ 233 (303)
T 3a7i_A 159 KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK---VL--FLIPK 233 (303)
T ss_dssp EECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HH--HHHHH
T ss_pred EEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH---HH--HHhhc
Confidence 47899999877654333345678999999999998899999999999999999999999975321100 00 00001
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQ 493 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~ 493 (502)
...+.+.. ....++..+++ .|++.+|++||++.||++.
T Consensus 234 ~~~~~~~~---~~~~~l~~li~---~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 234 NNPPTLEG---NYSKPLKEFVE---ACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp SCCCCCCS---SCCHHHHHHHH---HHCCSSGGGSCCHHHHTTC
T ss_pred CCCCCCcc---ccCHHHHHHHH---HHcCCChhhCcCHHHHhhC
Confidence 11112211 12245666666 9999999999999999763
No 253
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.24 E-value=7.6e-10 Score=110.93 Aligned_cols=280 Identities=13% Similarity=0.075 Sum_probs=186.2
Q ss_pred CCEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCc-------------------
Q 010736 70 GRVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQ------------------- 130 (502)
Q Consensus 70 ~~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~------------------- 130 (502)
..++.+.++. +++ .|...+|.++++|+.++|..+ ++.+-...|.++++|+.+.+..+-
T Consensus 71 ~~L~~i~lp~-~i~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~~ 147 (394)
T 4fs7_A 71 RKVTEIKIPS-TVR-EIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIP 147 (394)
T ss_dssp TTEEEEECCT-TCC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEECC
T ss_pred CCceEEEeCC-Ccc-CcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccccccC
Confidence 3688899874 354 677778999999999999865 665666778888888887765431
Q ss_pred --CcCCCCcccCCCCCCcEEEccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccc---
Q 010736 131 --FSGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSG--- 205 (502)
Q Consensus 131 --l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--- 205 (502)
.......+|.++++|+.+.+.++. .......|..+.+|+.+.+..| ++......|.++..|+.+.+..+...-
T Consensus 148 ~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~ 225 (394)
T 4fs7_A 148 EGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDF 225 (394)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTT
T ss_pred ccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehh
Confidence 111123457888999999997664 3355567888899999988766 554555667777777777665543221
Q ss_pred ------------------cCCccCcCCccCCccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCcc-ccccE
Q 010736 206 ------------------FIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTK 266 (502)
Q Consensus 206 ------------------~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~ 266 (502)
.-...+..+..++.+.+..+... .....|..+..++.+....+.+.. ..+.. ..|+.
T Consensus 226 ~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~---~~F~~~~~L~~ 301 (394)
T 4fs7_A 226 ALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPE---KTFYGCSSLTE 301 (394)
T ss_dssp TTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECT---TTTTTCTTCCE
T ss_pred hcccCCCceEEECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeecc---ccccccccccc
Confidence 11122333444444444433221 223344555555555554433221 12222 57888
Q ss_pred EECcCCcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCccc
Q 010736 267 LSLDDNHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNF 346 (502)
Q Consensus 267 L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 346 (502)
+.+..+ ++.+....|..+.+|+.+++..+ ++..-..+|.+|.+|+.+.+..+ ++.....+|..+++|+.+++..+ +
T Consensus 302 i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~ 377 (394)
T 4fs7_A 302 VKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-L 377 (394)
T ss_dssp EEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-G
T ss_pred cccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-C
Confidence 888654 66666677888999999999754 66555678999999999999876 77677789999999999999765 3
Q ss_pred ccccCccccCCCCCCee
Q 010736 347 YGEISSNFGECPKLGAL 363 (502)
Q Consensus 347 ~~~~~~~~~~~~~L~~L 363 (502)
. .+..+|.++++|+.+
T Consensus 378 ~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 378 E-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp G-GGGGGBCTTCEEEEE
T ss_pred E-EhhheecCCCCCcEE
Confidence 3 334567777777654
No 254
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.24 E-value=2.2e-12 Score=123.64 Aligned_cols=119 Identities=24% Similarity=0.270 Sum_probs=72.5
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccc-eecccceeeeeceeeeehhcCCCCCCcccCC------------
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTM-KITEKCDVYSFGVLVLEVIKGKHPRDFLSST------------ 436 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~-~~s~k~Dvysfgv~llElltg~~p~~~~~~~------------ 436 (502)
..+|||+++.........+...||..|+|||...+. ..+.++||||+||+++||+||+.|+......
T Consensus 140 kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 219 (288)
T 1ob3_A 140 KIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGT 219 (288)
T ss_dssp EECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred EEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCC
Confidence 468999998775433333455789999999998654 5899999999999999999999998532100
Q ss_pred -CCCCCCcccccccccCCCCCCC--------CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 437 -SSPSLNTDIALDEMLDPRLPVP--------SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 437 -~~~~~~~~~~~~~~~d~~l~~~--------~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
....+... ......++..... .....+++..+++ .|++.+|++||+++|+++
T Consensus 220 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 220 PNSKNWPNV-TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLS---KMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCTTTSTTG-GGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHH---HHTCSSTTTSCCHHHHHT
T ss_pred CChhhchhh-hcccccccccccccCccHHHHhhhcCHHHHHHHH---HHcCCCcccCCCHHHHhc
Confidence 00001000 0000111111100 0112345666666 999999999999999864
No 255
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.24 E-value=5.4e-13 Score=130.36 Aligned_cols=126 Identities=24% Similarity=0.339 Sum_probs=82.0
Q ss_pred cccccCcccccCCCCCC---cccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCccc-------CCCCC
Q 010736 370 ITGDFGIAKFLKPDSSN---WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLS-------STSSP 439 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~---~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~-------~~~~~ 439 (502)
..+|||+++........ .....++..|+|||...+...+.++||||||++++||+||+.|..... .....
T Consensus 185 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~ 264 (326)
T 2w1i_A 185 KIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 264 (326)
T ss_dssp EECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCC
T ss_pred EEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccc
Confidence 46899999887543321 123456778999999998899999999999999999999998864210 00000
Q ss_pred CCCcccccccccCC--CCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcC
Q 010736 440 SLNTDIALDEMLDP--RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499 (502)
Q Consensus 440 ~~~~~~~~~~~~d~--~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~ 499 (502)
.......+.+.+.. +.+.+ ....+++..+++ .|++.+|++||++.||+++|+.++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~---~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 265 GQMIVFHLIELLKNNGRLPRP-DGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp THHHHHHHHHHHHTTCCCCCC-TTCCHHHHHHHH---HHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHhhcCCCCCCC-CcccHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHHHH
Confidence 00000000111111 11111 122355666666 9999999999999999999998753
No 256
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.23 E-value=3.5e-13 Score=131.19 Aligned_cols=126 Identities=21% Similarity=0.271 Sum_probs=81.6
Q ss_pred cccccCcccccCCCCCC---cccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCC-----CCC-C
Q 010736 370 ITGDFGIAKFLKPDSSN---WTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSST-----SSP-S 440 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~---~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~-----~~~-~ 440 (502)
..+|||+++........ .....++..|+|||.......+.++||||+|++++||+||+.|+...... ... .
T Consensus 174 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~ 253 (318)
T 3lxp_A 174 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQG 253 (318)
T ss_dssp EECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCH
T ss_pred EECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhccccc
Confidence 46899999987543321 22345778899999999999999999999999999999999997521100 000 0
Q ss_pred CCcccccccccCCCCC-CCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 441 LNTDIALDEMLDPRLP-VPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 441 ~~~~~~~~~~~d~~l~-~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
........+.++.... ........++.++++ .|++.+|++||++.||++.|+.+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 254 QMTVLRLTELLERGERLPRPDKCPAEVYHLMK---NCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp HHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred chhHHHHHHHHhcccCCCCCccccHHHHHHHH---HHcCCCcccCcCHHHHHHHHHHHH
Confidence 0000001111111110 011122355666666 999999999999999999998863
No 257
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.23 E-value=1.5e-12 Score=127.78 Aligned_cols=111 Identities=24% Similarity=0.367 Sum_probs=77.7
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............||..|+|||......++.++|+||+||+++||+||+.|+..... ......
T Consensus 145 kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~ 216 (337)
T 1o6l_A 145 KITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------ERLFEL 216 (337)
T ss_dssp EECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHH
T ss_pred EEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--------HHHHHH
Confidence 468999998754433344557899999999999988899999999999999999999999742110 000011
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCC-----CHHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP-----TMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp-----~m~~v~~ 492 (502)
+......-+ .....++..+++ .|++.+|++|| +++||.+
T Consensus 217 i~~~~~~~p-~~~s~~~~~li~---~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 217 ILMEEIRFP-RTLSPEAKSLLA---GLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HHHCCCCCC-TTSCHHHHHHHH---HHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHcCCCCCC-CCCCHHHHHHHH---HHhhcCHHHhcCCCCCCHHHHHc
Confidence 111111111 112356677777 99999999999 8888854
No 258
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.23 E-value=1.1e-12 Score=134.07 Aligned_cols=122 Identities=23% Similarity=0.351 Sum_probs=82.1
Q ss_pred CCCeeeecCCcc---------ccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCC
Q 010736 359 KLGALNISRNNI---------TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429 (502)
Q Consensus 359 ~L~~L~l~~N~l---------~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p 429 (502)
++.|.||+..|| ++|||+++.............||.+|+|||...+..++.++|||||||+++||+||+.|
T Consensus 269 giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P 348 (446)
T 4ejn_A 269 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348 (446)
T ss_dssp CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCC
Confidence 455556655444 68999998765444444567899999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCC-----CHHHHHH
Q 010736 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP-----TMKIVSQ 492 (502)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp-----~m~~v~~ 492 (502)
+..... ......+......-+ .....++..+++ .|++.+|++|| ++.|+++
T Consensus 349 f~~~~~--------~~~~~~i~~~~~~~p-~~~~~~~~~li~---~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 349 FYNQDH--------EKLFELILMEEIRFP-RTLGPEAKSLLS---GLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp SCCSSH--------HHHHHHHHHCCCCCC-TTSCHHHHHHHH---HHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCCCH--------HHHHHHHHhCCCCCC-ccCCHHHHHHHH---HHcccCHHHhCCCCCCCHHHHHh
Confidence 742110 000011111111111 112245667776 99999999999 9998864
No 259
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.23 E-value=6.4e-13 Score=126.83 Aligned_cols=114 Identities=24% Similarity=0.366 Sum_probs=82.1
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++....... .....|+.+|+|||...+...+.++||||||++++||+||+.|..... .....
T Consensus 162 kl~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----------~~~~~ 230 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGK-RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS----------KFFTD 230 (284)
T ss_dssp EECCCTTCEESSCCSC-CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH----------HHHHH
T ss_pred EECcchhheecccccc-ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH----------HHHHH
Confidence 4789999988754332 234568999999999998889999999999999999999998853110 00011
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcCC
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAPS 500 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~~ 500 (502)
+.+..+.. ....++..+++ .|++.+|++||++.|+++.|+..+.+
T Consensus 231 ~~~~~~~~---~~~~~~~~li~---~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 231 LRDGIISD---IFDKKEKTLLQ---KLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp HHTTCCCT---TSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred hhcccccc---cCCHHHHHHHH---HHccCChhhCcCHHHHHHHHHHHhhC
Confidence 11111211 11244556666 99999999999999999999987653
No 260
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.23 E-value=1.8e-12 Score=128.05 Aligned_cols=43 Identities=35% Similarity=0.505 Sum_probs=37.9
Q ss_pred cccccccccCccccccc-eecccceeeeeceeeeehhcCCCCCC
Q 010736 389 GFAGTYGYIAPELAYTM-KITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 389 ~~~gt~gy~aPE~~~~~-~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
...||++|+|||...+. .++.++||||+||+++||+||+.|+.
T Consensus 205 ~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 205 PRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp -CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred ccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 35799999999988765 48899999999999999999999984
No 261
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.23 E-value=4.5e-13 Score=132.14 Aligned_cols=110 Identities=28% Similarity=0.474 Sum_probs=74.5
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccc---cceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAY---TMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~---~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++..... ....||..|+|||... ...++.++|||||||+++||+||+.|+...... .... .
T Consensus 194 kL~DfG~a~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~---~~~~--~ 264 (348)
T 1u5q_A 194 KLGDFGSASIMAPA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SALY--H 264 (348)
T ss_dssp EECCCTTCBSSSSB----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHH--H
T ss_pred EEeeccCceecCCC----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH---HHHH--H
Confidence 36899999876542 2357899999999974 567889999999999999999999997421100 0000 0
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHH
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQ 493 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~ 493 (502)
+..-..+.... ....+++..+++ .|++.+|++||++.|+++.
T Consensus 265 ~~~~~~~~~~~--~~~~~~l~~li~---~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 265 IAQNESPALQS--GHWSEYFRNFVD---SCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp HHHSCCCCCCC--TTSCHHHHHHHH---HHTCSSGGGSCCHHHHTTC
T ss_pred HHhcCCCCCCC--CCCCHHHHHHHH---HHcccChhhCcCHHHHhhC
Confidence 00111111111 112345666666 9999999999999998753
No 262
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.23 E-value=1e-12 Score=125.21 Aligned_cols=111 Identities=24% Similarity=0.391 Sum_probs=56.0
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............|+..|+|||.......+.++||||||++++||+||+.|++....... ......
T Consensus 152 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~-- 226 (278)
T 3cok_A 152 KIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT---LNKVVL-- 226 (278)
T ss_dssp EECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------CCS--
T ss_pred EEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH---HHHHhh--
Confidence 478999998775433333346789999999999888899999999999999999999999863221110 000000
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.+...+. ....++..+++ .|++.+|++||++.||++
T Consensus 227 -~~~~~~~---~~~~~~~~li~---~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 227 -ADYEMPS---FLSIEAKDLIH---QLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp -SCCCCCT---TSCHHHHHHHH---HHSCSSGGGSCCHHHHTT
T ss_pred -cccCCcc---ccCHHHHHHHH---HHcccCHhhCCCHHHHhc
Confidence 1111111 12245666666 999999999999999965
No 263
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.23 E-value=1.2e-12 Score=139.89 Aligned_cols=128 Identities=22% Similarity=0.383 Sum_probs=83.7
Q ss_pred CCCeeeecCCcc---------ccccCcccccCCCCC-CcccccccccccCccccccceecccceeeeeceeeeehhc-CC
Q 010736 359 KLGALNISRNNI---------TGDFGIAKFLKPDSS-NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GK 427 (502)
Q Consensus 359 ~L~~L~l~~N~l---------~~dfGl~~ll~~~~~-~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~ 427 (502)
++.|.||+..|| .+|||+++....... ......++..|+|||......++.++|||||||+++||+| |+
T Consensus 511 givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~ 590 (656)
T 2j0j_A 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 590 (656)
T ss_dssp TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCC
Confidence 455666665554 689999998754322 1223456789999999988899999999999999999997 99
Q ss_pred CCCCcccCCCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 428 HPRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 428 ~p~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
.|+...... .... .+.....+.++ .....++..++. .|++.+|++||++.||+++|+.+
T Consensus 591 ~Pf~~~~~~---~~~~--~i~~~~~~~~~---~~~~~~l~~li~---~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 591 KPFQGVKNN---DVIG--RIENGERLPMP---PNCPPTLYSLMT---KCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp CTTTTCCHH---HHHH--HHHHTCCCCCC---TTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCHH---HHHH--HHHcCCCCCCC---ccccHHHHHHHH---HHcCCChhHCcCHHHHHHHHHHH
Confidence 997532110 0000 00000011111 112245666666 99999999999999999999876
No 264
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.23 E-value=7.4e-13 Score=130.82 Aligned_cols=111 Identities=20% Similarity=0.267 Sum_probs=77.6
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............||..|+|||......++.++||||+||+++||+||+.|+..... .....
T Consensus 173 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~ 243 (351)
T 3c0i_A 173 KLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---------RLFEG 243 (351)
T ss_dssp EECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---------HHHHH
T ss_pred EEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---------HHHHH
Confidence 368999998876544334456799999999999988899999999999999999999999753110 00011
Q ss_pred ccCCCCCCCC---cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPS---CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~---~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+......... ....+++..+++ .|++.+|++||++.|+++
T Consensus 244 i~~~~~~~~~~~~~~~s~~~~~li~---~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 244 IIKGKYKMNPRQWSHISESAKDLVR---RMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHTCCCCCHHHHTTSCHHHHHHHH---HHTCSSTTTSCCHHHHHT
T ss_pred HHcCCCCCCccccccCCHHHHHHHH---HHCCCChhHCcCHHHHhc
Confidence 1111110000 011245666666 999999999999999875
No 265
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.22 E-value=9.1e-13 Score=138.21 Aligned_cols=112 Identities=22% Similarity=0.275 Sum_probs=77.5
Q ss_pred ccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc-
Q 010736 371 TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE- 449 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~- 449 (502)
++|||+++.+..... .....||+.|+|||...+..++.++|+||+||+++||+||+.|+...... .........+
T Consensus 298 l~DFG~a~~~~~~~~-~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~---~~~~~i~~~~~ 373 (573)
T 3uto_A 298 LIDFGLTAHLDPKQS-VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD---ETLRNVKSCDW 373 (573)
T ss_dssp ECCCSSCEECCTTSE-EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHHHHHTTCC
T ss_pred EeeccceeEccCCCc-eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HHHHHHHhCCC
Confidence 689999998865432 34567999999999999999999999999999999999999998521110 0000000000
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
-+++... ....++...+++ .|++.+|++||++.|+++
T Consensus 374 ~~~~~~~---~~~s~~~~dli~---~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 374 NMDDSAF---SGISEDGKDFIR---KLLLADPNTRMTIHQALE 410 (573)
T ss_dssp CCCSGGG---TTSCHHHHHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred CCCcccc---cCCCHHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 0111110 112245667777 999999999999999865
No 266
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.22 E-value=6.3e-13 Score=129.01 Aligned_cols=109 Identities=25% Similarity=0.293 Sum_probs=71.2
Q ss_pred ccccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccc
Q 010736 369 NITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALD 448 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~ 448 (502)
-.++|||+++...... ......||.+|+|||...+ ..+.++|||||||+++||+||+.|....... ..+ ..
T Consensus 196 ~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~--~~~-----~~ 266 (311)
T 3p1a_A 196 CKLGDFGLLVELGTAG-AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGW--QQL-----RQ 266 (311)
T ss_dssp EEECCCTTCEECC-------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH--HHH-----TT
T ss_pred EEEccceeeeecccCC-CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHH--HHH-----hc
Confidence 3479999998775432 2234569999999998875 7899999999999999999997764311000 000 00
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 449 EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 449 ~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
....+.... ...+++..+++ .|++.+|++||+++|+++
T Consensus 267 ~~~~~~~~~---~~~~~l~~li~---~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 267 GYLPPEFTA---GLSSELRSVLV---MMLEPDPKLRATAEALLA 304 (311)
T ss_dssp TCCCHHHHT---TSCHHHHHHHH---HHSCSSTTTSCCHHHHHT
T ss_pred cCCCccccc---CCCHHHHHHHH---HHcCCChhhCcCHHHHHh
Confidence 011111110 11245566666 999999999999999975
No 267
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.22 E-value=7.9e-13 Score=129.22 Aligned_cols=117 Identities=26% Similarity=0.360 Sum_probs=78.5
Q ss_pred cccccCcccccCCCCC--CcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSS--NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~--~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++....... ......|+.+|+|||.......+.++||||||++++||+| |+.|+...... ..
T Consensus 183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~ 254 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--------EV 254 (327)
T ss_dssp EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HH
T ss_pred EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--------HH
Confidence 3689999886543221 1223567889999999988889999999999999999999 89987531110 00
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
...+.............+++..+++ .|++.+|++||++.||++.|+..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 255 LEFVTSGGRMDPPKNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHH---HHhcCChhhCcCHHHHHHHHHHH
Confidence 0001110000011112345666666 99999999999999999999876
No 268
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.22 E-value=9.8e-13 Score=128.62 Aligned_cols=111 Identities=23% Similarity=0.351 Sum_probs=76.6
Q ss_pred ccccccCcccccCCCCCCcccccccccccCccccccceec-ccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccc
Q 010736 369 NITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKIT-EKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIAL 447 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s-~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~ 447 (502)
-.++|||+++...... ......||.+|+|||...+.... .++||||+||+++||+||+.|++..... ...
T Consensus 153 ~kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~ 223 (328)
T 3fe3_A 153 IKIADFGFSNEFTVGG-KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK--------ELR 223 (328)
T ss_dssp EEECSTTCCGGGSSSC-GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHH
T ss_pred EEEeeccCceecCCCC-ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH--------HHH
Confidence 3479999998775432 23456799999999999887765 7899999999999999999998532100 000
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 448 DEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 448 ~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
..+.......+. ....++..+++ .|++.+|++||++.|+++
T Consensus 224 ~~i~~~~~~~p~-~~s~~~~~li~---~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 224 ERVLRGKYRIPF-YMSTDCENLLK---RFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp HHHHHCCCCCCT-TSCHHHHHHHH---HHCCSSTTTSCCHHHHTT
T ss_pred HHHHhCCCCCCC-CCCHHHHHHHH---HHCCCChhHCcCHHHHhc
Confidence 111111111111 12245666666 999999999999999965
No 269
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.22 E-value=1.9e-12 Score=127.00 Aligned_cols=105 Identities=25% Similarity=0.409 Sum_probs=76.4
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccccccee-cccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKI-TEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALD 448 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~-s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~ 448 (502)
..+|||+++....... .....||.+|+|||...+... +.++|||||||+++||+||+.|+.....
T Consensus 170 kL~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------------- 235 (335)
T 3dls_A 170 KLIDFGSAAYLERGKL-FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------------- 235 (335)
T ss_dssp EECCCTTCEECCTTCC-BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-------------
T ss_pred EEeecccceECCCCCc-eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-------------
Confidence 4689999988765432 234679999999999887776 7899999999999999999999753211
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHH
Q 010736 449 EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQ 493 (502)
Q Consensus 449 ~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~ 493 (502)
........+ ....+++..+++ .|++.+|++||++.|+++.
T Consensus 236 -~~~~~~~~~-~~~~~~l~~li~---~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 236 -TVEAAIHPP-YLVSKELMSLVS---GLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -GTTTCCCCS-SCCCHHHHHHHH---HHTCSSGGGSCCHHHHHHC
T ss_pred -HHhhccCCC-cccCHHHHHHHH---HHccCChhhCcCHHHHhcC
Confidence 011111101 112245666766 9999999999999999763
No 270
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.22 E-value=1.5e-12 Score=127.10 Aligned_cols=115 Identities=26% Similarity=0.352 Sum_probs=56.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccc----ccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELA----YTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDI 445 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~----~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~ 445 (502)
..+|||+++....... .....|+..|+|||.. ....++.++||||||++++||+||+.|++...... ... ..
T Consensus 166 kl~Dfg~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~-~~- 241 (327)
T 3aln_A 166 KLCDFGISGQLVDSIA-KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-DQL-TQ- 241 (327)
T ss_dssp EECCCSSSCC-------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------CC-
T ss_pred EEccCCCceecccccc-cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-HHH-HH-
Confidence 3689999987654322 2334689999999998 45668899999999999999999999986322110 000 00
Q ss_pred ccccccCCCCCCC-CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 446 ALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 446 ~~~~~~d~~l~~~-~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
......+.+... ......++..+++ .|++.+|++||++.||++
T Consensus 242 -~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 242 -VVKGDPPQLSNSEEREFSPSFINFVN---LCLTKDESKRPKYKELLK 285 (327)
T ss_dssp -CCCSCCCCCCCCSSCCCCHHHHHHHH---HHTCSSGGGSCCHHHHTT
T ss_pred -HhcCCCCCCCCcccccCCHHHHHHHH---HHhhCChhhCcCHHHHHh
Confidence 000011111110 0112345666666 999999999999999865
No 271
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.21 E-value=7.5e-13 Score=133.77 Aligned_cols=102 Identities=13% Similarity=0.122 Sum_probs=72.1
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccc----------ccceecccceeeeeceeeeehhcCCCCCCcccCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELA----------YTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSP 439 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~----------~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~ 439 (502)
.++|||+++..... .....| .+|+|||.. ....++.++|||||||+++||+||+.|+.......
T Consensus 251 kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~-- 324 (413)
T 3dzo_A 251 FLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALG-- 324 (413)
T ss_dssp EECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGS--
T ss_pred EEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhh--
Confidence 37999998876433 234567 999999998 66678999999999999999999999985322111
Q ss_pred CCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHH
Q 010736 440 SLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVS 491 (502)
Q Consensus 440 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~ 491 (502)
....++... . ...+++..+++ .|++.+|++||++.|++
T Consensus 325 ------~~~~~~~~~-~----~~~~~~~~li~---~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 325 ------GSEWIFRSC-K----NIPQPVRALLE---GFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp ------CSGGGGSSC-C----CCCHHHHHHHH---HHTCSSGGGSCCHHHHT
T ss_pred ------hHHHHHhhc-c----cCCHHHHHHHH---HHccCChhhCcCHHHHH
Confidence 011111111 0 12255666666 99999999999977764
No 272
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.21 E-value=6.3e-13 Score=129.21 Aligned_cols=124 Identities=23% Similarity=0.383 Sum_probs=80.9
Q ss_pred ccccccCcccccCCCCCC---------cccccccccccCccccccc---eecccceeeeeceeeeehhcCCCCCCcccCC
Q 010736 369 NITGDFGIAKFLKPDSSN---------WTGFAGTYGYIAPELAYTM---KITEKCDVYSFGVLVLEVIKGKHPRDFLSST 436 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~~~---------~~~~~gt~gy~aPE~~~~~---~~s~k~Dvysfgv~llElltg~~p~~~~~~~ 436 (502)
-..+|||+++........ .....|+..|+|||..... .++.++||||||++++||+||+.|++.....
T Consensus 173 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~ 252 (317)
T 2buj_A 173 PVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK 252 (317)
T ss_dssp EEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT
T ss_pred EEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc
Confidence 346899988765321110 1234578999999997643 4788999999999999999999998532111
Q ss_pred CCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcCCC
Q 010736 437 SSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAPSL 501 (502)
Q Consensus 437 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~~~ 501 (502)
.. .... .... ....+.. ....+++.++++ .|++.+|++||++.||++.|+.++++.
T Consensus 253 ~~-~~~~--~~~~--~~~~~~~-~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 253 GD-SVAL--AVQN--QLSIPQS-PRHSSALWQLLN---SMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp TS-CHHH--HHHC--C--CCCC-TTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred cc-hhhH--Hhhc--cCCCCcc-ccCCHHHHHHHH---HHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 00 0000 0000 0011111 112345666666 999999999999999999999987753
No 273
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.21 E-value=1.7e-12 Score=125.91 Aligned_cols=113 Identities=27% Similarity=0.468 Sum_probs=71.0
Q ss_pred cccccCcccccCCCCCC--cccccccccccCcccccc-----------ceecccceeeeeceeeeehhcCCCCCCcccCC
Q 010736 370 ITGDFGIAKFLKPDSSN--WTGFAGTYGYIAPELAYT-----------MKITEKCDVYSFGVLVLEVIKGKHPRDFLSST 436 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~--~~~~~gt~gy~aPE~~~~-----------~~~s~k~Dvysfgv~llElltg~~p~~~~~~~ 436 (502)
..+|||+++........ .....|+..|+|||.... ...+.++||||||++++||+||+.|++....
T Consensus 166 kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~- 244 (313)
T 3cek_A 166 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN- 244 (313)
T ss_dssp EECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-
T ss_pred EEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-
Confidence 36899999877543221 224568999999999865 4688899999999999999999999753211
Q ss_pred CCCCCCcccccccccCCCCCCC-CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 437 SSPSLNTDIALDEMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 437 ~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.......++++..... .....+++..+++ .|++.+|++||++.||++
T Consensus 245 ------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 245 ------QISKLHAIIDPNHEIEFPDIPEKDLQDVLK---CCLKRDPKQRISIPELLA 292 (313)
T ss_dssp ------HHHHHHHHHCTTSCCCCCCCSCHHHHHHHH---HHTCSSTTTSCCHHHHHT
T ss_pred ------HHHHHHHHHhcccccCCcccchHHHHHHHH---HHccCCcccCcCHHHHhc
Confidence 0001112222221110 0112345666666 999999999999999975
No 274
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.21 E-value=3e-13 Score=132.17 Aligned_cols=119 Identities=21% Similarity=0.317 Sum_probs=60.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............||.+|+|||......++.++||||+||+++||+||+.|++.......... .......
T Consensus 149 kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~-~~~~~~~ 227 (325)
T 3kn6_A 149 KIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTS-AVEIMKK 227 (325)
T ss_dssp EECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCC-HHHHHHH
T ss_pred EEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccccc-HHHHHHH
Confidence 368999999876554444556789999999999988999999999999999999999999863221100000 0000111
Q ss_pred ccCCCCCCCC---cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPS---CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~---~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+......... ....+++..+++ .|++.+|++||++.||++
T Consensus 228 i~~~~~~~~~~~~~~~s~~~~~li~---~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 228 IKKGDFSFEGEAWKNVSQEAKDLIQ---GLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HTTTCCCCCSHHHHTSCHHHHHHHH---HHHCCCTTTCCCTTTSTT
T ss_pred HHcCCCCCCcccccCCCHHHHHHHH---HHCCCChhHCCCHHHHhc
Confidence 1221111110 011245666666 999999999999999863
No 275
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.21 E-value=1.5e-12 Score=127.16 Aligned_cols=116 Identities=22% Similarity=0.308 Sum_probs=77.6
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCcccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNTDIALD 448 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~~~~~~ 448 (502)
..+|||+++...... ......++..|+|||.......+.++||||+|++++||+| |+.|+...... .... .+.
T Consensus 182 kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~---~~~~--~~~ 255 (327)
T 1fvr_A 182 KIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---ELYE--KLP 255 (327)
T ss_dssp EECCTTCEESSCEEC-CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH--HGG
T ss_pred EEcccCcCccccccc-cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH---HHHH--Hhh
Confidence 368999987543221 1223456789999999988889999999999999999999 99997532110 0000 000
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 449 EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 449 ~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
.-..+..+ ....+++..+++ .|++.+|++||++.|+++.|+.+
T Consensus 256 ~~~~~~~~---~~~~~~l~~li~---~~l~~dp~~Rps~~ell~~L~~~ 298 (327)
T 1fvr_A 256 QGYRLEKP---LNCDDEVYDLMR---QCWREKPYERPSFAQILVSLNRM 298 (327)
T ss_dssp GTCCCCCC---TTBCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCCCC---CCCCHHHHHHHH---HHccCChhhCcCHHHHHHHHHHH
Confidence 10111111 122355666666 99999999999999999999876
No 276
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.20 E-value=2.9e-12 Score=130.11 Aligned_cols=113 Identities=27% Similarity=0.381 Sum_probs=69.4
Q ss_pred ccccCcccccCCCCC---CcccccccccccCccccc---cceecccceeeeeceeeeehhc-CCCCCCcccCCCCCCCCc
Q 010736 371 TGDFGIAKFLKPDSS---NWTGFAGTYGYIAPELAY---TMKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTSSPSLNT 443 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~---~~~~~~gt~gy~aPE~~~---~~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~~~~~~~ 443 (502)
.+|||+++.+..... ..+...||.+|+|||... ....+.++|||||||+++||+| |+.|+....... .
T Consensus 164 L~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~-----~ 238 (432)
T 3p23_A 164 ISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ-----A 238 (432)
T ss_dssp ECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH-----H
T ss_pred EecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH-----H
Confidence 689999998754321 234567999999999987 4567789999999999999999 899874211000 0
Q ss_pred ccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 444 DIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 444 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
...... .......+.......+..+++ .|++.+|++||++.||++
T Consensus 239 ~~~~~~-~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 239 NILLGA-CSLDCLHPEKHEDVIARELIE---KMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHHTTC-CCCTTSCTTCHHHHHHHHHHH---HHSCSSGGGSCCHHHHHT
T ss_pred HHHhcc-CCccccCccccccHHHHHHHH---HHHhCCHhhCCCHHHHHh
Confidence 000000 001111111122233455555 999999999999999973
No 277
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.20 E-value=1.2e-12 Score=125.46 Aligned_cols=113 Identities=27% Similarity=0.405 Sum_probs=65.2
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccc----ccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELA----YTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDI 445 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~----~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~ 445 (502)
..+|||+++....... .....||..|+|||.. .....+.++||||+|++++||+||+.|++..... .....
T Consensus 150 kl~Dfg~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~ 224 (290)
T 3fme_A 150 KMCDFGISGYLVDDVA-KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP----FQQLK 224 (290)
T ss_dssp EBCCC----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH----HHHHH
T ss_pred EEeecCCccccccccc-ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch----HHHHH
Confidence 4789999987754322 2234689999999995 5667889999999999999999999998531110 00000
Q ss_pred ccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 446 ALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 446 ~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.......+.... ....+++..+++ .|++.+|++||++.||++
T Consensus 225 ~~~~~~~~~~~~--~~~~~~~~~li~---~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 225 QVVEEPSPQLPA--DKFSAEFVDFTS---QCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHHHSCCCCCCT--TTSCHHHHHHHH---HHTCSSGGGSCCHHHHTT
T ss_pred HHhccCCCCccc--ccCCHHHHHHHH---HHhhcChhhCcCHHHHHh
Confidence 000001111111 112345666666 999999999999999976
No 278
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.20 E-value=2.9e-12 Score=124.26 Aligned_cols=120 Identities=18% Similarity=0.198 Sum_probs=75.2
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccccc-ceecccceeeeeceeeeehhcCCCCCCcccCCCC----------
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSS---------- 438 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~-~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~---------- 438 (502)
..+|||+++.........+...||..|+|||...+ ...+.++||||+||+++||+||+.|+........
T Consensus 159 kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~ 238 (311)
T 3niz_A 159 KLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGT 238 (311)
T ss_dssp EECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCC
T ss_pred EEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCC
Confidence 46899999987644444455678999999999865 4679999999999999999999999853221110
Q ss_pred ---CCCCccccc-------ccccCCCCC-CCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 439 ---PSLNTDIAL-------DEMLDPRLP-VPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 439 ---~~~~~~~~~-------~~~~d~~l~-~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
..+...... ....+.... .......+++.++++ .|++.+|++||+++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 239 PNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLS---NMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHH---HHSCSCTTTSCCHHHHHT
T ss_pred CChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHH---HHcCCChhHCCCHHHHhc
Confidence 000000000 000000000 000011235556666 999999999999999976
No 279
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.20 E-value=1.1e-12 Score=129.26 Aligned_cols=111 Identities=23% Similarity=0.338 Sum_probs=68.5
Q ss_pred cccccCcccccCCCC-CCcccccccccccCcccccccee-cccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccc
Q 010736 370 ITGDFGIAKFLKPDS-SNWTGFAGTYGYIAPELAYTMKI-TEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIAL 447 (502)
Q Consensus 370 l~~dfGl~~ll~~~~-~~~~~~~gt~gy~aPE~~~~~~~-s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~ 447 (502)
..+|||+++...... .......||..|+|||...+... +.++||||+||+++||+||+.|++..... ...
T Consensus 148 kL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~--------~~~ 219 (347)
T 3zgw_A 148 KLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM--------ALY 219 (347)
T ss_dssp EECCCTTCBC--------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHH
T ss_pred EEEeccCcccccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH--------HHH
Confidence 478999988764322 22345679999999999987764 88999999999999999999998531100 001
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 448 DEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 448 ~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
..+.......+. ....++..+++ .|++.+|++||++.|+++
T Consensus 220 ~~i~~~~~~~p~-~~s~~~~~li~---~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 220 KKIMRGKYDVPK-WLSPSSILLLQ---QMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp HHHHHTCCCCCT-TCCHHHHHHHH---HHTCSSGGGSCCHHHHHT
T ss_pred HHHHcCCCCCCC-CCCHHHHHHHH---HHcccCHhHCcCHHHHhc
Confidence 111111111111 12245566666 999999999999999975
No 280
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.20 E-value=1.5e-12 Score=129.21 Aligned_cols=113 Identities=27% Similarity=0.446 Sum_probs=76.6
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++...... ......||.+|+|||......++.++||||+||+++||+||+.|+...... ....... ..
T Consensus 171 kl~DfG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~---~~~~~i~-~~ 245 (362)
T 2bdw_A 171 KLADFGLAIEVNDSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYAQIK-AG 245 (362)
T ss_dssp EECCCTTCBCCTTCC-SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH-HT
T ss_pred EEeecCcceEecCCc-ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHHHHHH-hC
Confidence 368999998775432 234568999999999999888999999999999999999999997421100 0000000 00
Q ss_pred ccCCCCCCCC-cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~-~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
..+ .+.+. ....+++..+++ .|++.+|++||++.|+++
T Consensus 246 ~~~--~~~~~~~~~~~~~~~li~---~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 246 AYD--YPSPEWDTVTPEAKSLID---SMLTVNPKKRITADQALK 284 (362)
T ss_dssp CCC--CCTTGGGGSCHHHHHHHH---HHSCSSGGGSCCHHHHTT
T ss_pred CCC--CCcccccCCCHHHHHHHH---HHcCCChhhCcCHHHHhc
Confidence 000 00000 112345666666 999999999999999865
No 281
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.20 E-value=1.1e-12 Score=129.44 Aligned_cols=112 Identities=21% Similarity=0.269 Sum_probs=67.5
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++...... ......||.+|+|||...+..++.++|||||||+++||+||+.|+...... ......
T Consensus 191 kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~ 262 (349)
T 2w4o_A 191 KIADFGLSKIVEHQV-LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-------QFMFRR 262 (349)
T ss_dssp EECCCC-----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-------HHHHHH
T ss_pred EEccCccccccCccc-ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-------HHHHHH
Confidence 468999998765432 223467899999999999888999999999999999999999997421110 000011
Q ss_pred ccCCCC--CCC-CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRL--PVP-SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l--~~~-~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+..... ..+ ......++..+++ .|++.+|++||++.|+++
T Consensus 263 i~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 263 ILNCEYYFISPWWDEVSLNAKDLVR---KLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HHTTCCCCCTTTTTTSCHHHHHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred HHhCCCccCCchhhhCCHHHHHHHH---HHccCChhhCcCHHHHhc
Confidence 111110 000 0112345666666 999999999999999875
No 282
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.20 E-value=7.7e-13 Score=129.09 Aligned_cols=113 Identities=25% Similarity=0.368 Sum_probs=68.2
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccc-----cceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAY-----TMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTD 444 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~-----~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~ 444 (502)
..+|||+++.............|+..|+|||... ....+.++||||||++++||+||+.|+....... ..
T Consensus 169 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~ 243 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-----AL 243 (326)
T ss_dssp EECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HH
T ss_pred EEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-----HH
Confidence 4689999987654332233457899999999986 5678899999999999999999999974211100 00
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 445 IALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 445 ~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
..+.....+.... ....+++..+++ .|++.+|++||++.|+++
T Consensus 244 ~~~~~~~~~~~~~--~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 244 FLIPRNPAPRLKS--KKWSKKFQSFIE---SCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHHSCCCCCSC--SCSCHHHHHHHH---HHCCSSGGGSCCHHHHHT
T ss_pred HHhhcCccccCCc--cccCHHHHHHHH---HHhccChhhCCCHHHHhh
Confidence 0000111111111 112356667776 999999999999999876
No 283
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.20 E-value=1.9e-12 Score=124.57 Aligned_cols=118 Identities=23% Similarity=0.332 Sum_probs=75.3
Q ss_pred cccccCcccccCCCCC-CcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccc
Q 010736 370 ITGDFGIAKFLKPDSS-NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALD 448 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~-~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~ 448 (502)
..+|||+++....... ......||..|+|||...+...+.++||||+|++++||+||+.|++...... .... ...
T Consensus 151 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~---~~~~-~~~ 226 (294)
T 4eqm_A 151 KIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS---IAIK-HIQ 226 (294)
T ss_dssp EECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH---HHHH-HHS
T ss_pred EEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH---HHHH-Hhh
Confidence 3689999987754322 2234578999999999998889999999999999999999999985321100 0000 000
Q ss_pred cccC---CCCCCCCcchHHHHHHHHHHhhccCCcCCCCCC-CHHHHHHHHHhh
Q 010736 449 EMLD---PRLPVPSCSVQEKLISIMEVGFSCLKESPESRP-TMKIVSQQLRIS 497 (502)
Q Consensus 449 ~~~d---~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp-~m~~v~~~l~~~ 497 (502)
+... .... ....+++..++. .|++.+|++|| +++++.+.|+..
T Consensus 227 ~~~~~~~~~~~---~~~~~~l~~li~---~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 227 DSVPNVTTDVR---KDIPQSLSNVIL---RATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp SCCCCHHHHSC---TTSCHHHHHHHH---HHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred ccCCCcchhcc---cCCCHHHHHHHH---HHhcCCHhHccccHHHHHHHHHHH
Confidence 0000 0000 112245666665 99999999999 999999999876
No 284
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.19 E-value=5e-12 Score=121.33 Aligned_cols=61 Identities=20% Similarity=0.344 Sum_probs=50.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccce-ecccceeeeeceeeeehhcCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMK-ITEKCDVYSFGVLVLEVIKGKHPR 430 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~-~s~k~Dvysfgv~llElltg~~p~ 430 (502)
..+|||+++.............||..|+|||...+.. .+.++||||+||+++||+||+.|+
T Consensus 141 kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~ 202 (292)
T 3o0g_A 141 KLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202 (292)
T ss_dssp EECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCS
T ss_pred EEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCC
Confidence 4789999998764444445567899999999987765 799999999999999999998885
No 285
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.19 E-value=1.7e-12 Score=129.19 Aligned_cols=114 Identities=21% Similarity=0.307 Sum_probs=78.7
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............||..|+|||......++.++|+||+||+++||+||+.|+..... ......
T Consensus 179 kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~ 250 (373)
T 2r5t_A 179 VLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--------AEMYDN 250 (373)
T ss_dssp EECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--------HHHHHH
T ss_pred EEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--------HHHHHH
Confidence 368999998754433334457899999999999988899999999999999999999999742110 001111
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLR 495 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~ 495 (502)
+....+.-+ .....++..+++ .|++.+|++||++.+.++.++
T Consensus 251 i~~~~~~~~-~~~~~~~~~li~---~lL~~dp~~R~~~~~~~~~i~ 292 (373)
T 2r5t_A 251 ILNKPLQLK-PNITNSARHLLE---GLLQKDRTKRLGAKDDFMEIK 292 (373)
T ss_dssp HHHSCCCCC-SSSCHHHHHHHH---HHTCSSGGGSTTTTTTHHHHH
T ss_pred HHhcccCCC-CCCCHHHHHHHH---HHcccCHHhCCCCCCCHHHHh
Confidence 221111111 112355667777 999999999999865554443
No 286
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.19 E-value=4.4e-12 Score=123.32 Aligned_cols=63 Identities=25% Similarity=0.370 Sum_probs=51.6
Q ss_pred ccccccCcccccCCCCCCcccccccccccCcccccc-ceecccceeeeeceeeeehhcCCCCCC
Q 010736 369 NITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~-~~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
-..+|||+++.............||..|+|||...+ ...+.++||||+||+++||+||+.|+.
T Consensus 147 ~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 210 (317)
T 2pmi_A 147 LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFP 210 (317)
T ss_dssp EEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 347999999887544333445678999999999875 457899999999999999999999985
No 287
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.19 E-value=1.7e-12 Score=125.79 Aligned_cols=120 Identities=19% Similarity=0.257 Sum_probs=70.7
Q ss_pred cccccCcccccCCCC-CCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccc
Q 010736 370 ITGDFGIAKFLKPDS-SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALD 448 (502)
Q Consensus 370 l~~dfGl~~ll~~~~-~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~ 448 (502)
..+|||+++...... .......|+..|+|||.......+.++||||||++++||+||+.|+...... .. ......
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~-~~~~~~ 249 (309)
T 2h34_A 174 YLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS---VM-GAHINQ 249 (309)
T ss_dssp EECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH---HH-HHHHHS
T ss_pred EEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH---HH-HHHhcc
Confidence 478999998765432 1223456899999999999888999999999999999999999997532110 00 000000
Q ss_pred cccCC-CCCCCCcchHHHHHHHHHHhhccCCcCCCCCC-CHHHHHHHHHhhcC
Q 010736 449 EMLDP-RLPVPSCSVQEKLISIMEVGFSCLKESPESRP-TMKIVSQQLRISAP 499 (502)
Q Consensus 449 ~~~d~-~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp-~m~~v~~~l~~~~~ 499 (502)
....+ ... ....+++..+++ .|++.+|++|| ++.++++.|+....
T Consensus 250 ~~~~~~~~~---~~~~~~l~~li~---~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 250 AIPRPSTVR---PGIPVAFDAVIA---RGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp CCCCGGGTS---TTCCTHHHHHHH---HHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred CCCCccccC---CCCCHHHHHHHH---HhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 00001 011 111235666666 99999999999 99999999988644
No 288
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.18 E-value=1.5e-12 Score=125.08 Aligned_cols=114 Identities=23% Similarity=0.364 Sum_probs=74.8
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccce--ecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMK--ITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIAL 447 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~--~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~ 447 (502)
..+|||+++.............|+..|+|||...... .+.++||||||++++||+||+.|+........ .. .. ..
T Consensus 163 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~-~~-~~ 239 (295)
T 2clq_A 163 KISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA-AM-FK-VG 239 (295)
T ss_dssp EECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH-HH-HH-HH
T ss_pred EEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH-HH-Hh-hc
Confidence 4789999987754333334567899999999987643 78999999999999999999999753211000 00 00 00
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 448 DEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 448 ~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.....+.++. ...+++..+++ .|++.+|++||++.|+++
T Consensus 240 ~~~~~~~~~~---~~~~~~~~li~---~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 240 MFKVHPEIPE---SMSAEAKAFIL---KCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHCCCCCCCT---TSCHHHHHHHH---HTTCSSTTTSCCHHHHHT
T ss_pred cccccccccc---cCCHHHHHHHH---HHccCChhhCCCHHHHhc
Confidence 0012222221 12345666666 999999999999999974
No 289
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.18 E-value=1.2e-12 Score=129.30 Aligned_cols=106 Identities=26% Similarity=0.396 Sum_probs=69.7
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............||..|+|||......++.++|+||+||+++||+||+.|+..... ......
T Consensus 164 kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~ 235 (353)
T 3txo_A 164 KLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE--------DDLFEA 235 (353)
T ss_dssp EECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHH
T ss_pred EEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH--------HHHHHH
Confidence 368999998754433334457899999999999988899999999999999999999999853211 001111
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m 487 (502)
+......-+ ....+++..+++ .|++.+|++||+.
T Consensus 236 i~~~~~~~p-~~~~~~~~~li~---~lL~~dP~~R~~~ 269 (353)
T 3txo_A 236 ILNDEVVYP-TWLHEDATGILK---SFMTKNPTMRLGS 269 (353)
T ss_dssp HHHCCCCCC-TTSCHHHHHHHH---HHTCSSGGGSTTS
T ss_pred HHcCCCCCC-CCCCHHHHHHHH---HHhhhCHHHccCC
Confidence 111111111 112245666776 9999999999998
No 290
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.18 E-value=2.2e-12 Score=123.51 Aligned_cols=112 Identities=29% Similarity=0.442 Sum_probs=69.5
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++....... .....|+..|+|||... ...+.++||||+|++++||+||+.|+...... ..... ..
T Consensus 167 kl~Dfg~a~~~~~~~~-~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~---~~~~~---~~ 238 (285)
T 3is5_A 167 KIIDFGLAELFKSDEH-STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE---EVQQK---AT 238 (285)
T ss_dssp EECCCCCCCC-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHH---HH
T ss_pred EEEeeecceecCCccc-CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH---HHHhh---hc
Confidence 3689999987654322 23467899999999875 56889999999999999999999997531100 00000 00
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
...+..........+++..+++ .|++.+|++||++.||++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 239 YKEPNYAVECRPLTPQAVDLLK---QMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HCCCCCCC--CCCCHHHHHHHH---HHTCSCTTTSCCHHHHHT
T ss_pred cCCcccccccCcCCHHHHHHHH---HHccCChhhCcCHHHHhc
Confidence 0111111010112245666666 999999999999999975
No 291
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.18 E-value=1.3e-12 Score=125.53 Aligned_cols=111 Identities=24% Similarity=0.392 Sum_probs=78.1
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............|+.+|+|||.......+.++||||+|++++||+||+.|++..... .....
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~ 226 (294)
T 2rku_A 155 KIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--------ETYLR 226 (294)
T ss_dssp EECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHH
T ss_pred EEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHH
Confidence 4689999988754433344567899999999998888999999999999999999999997532110 00011
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+.......+ .....++..+++ .|++.+|++||++.|+++
T Consensus 227 ~~~~~~~~~-~~~~~~~~~li~---~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 227 IKKNEYSIP-KHINPVAASLIQ---KMLQTDPTARPTINELLN 265 (294)
T ss_dssp HHTTCCCCC-TTSCHHHHHHHH---HHTCSSGGGSCCGGGGGG
T ss_pred HhhccCCCc-cccCHHHHHHHH---HHcccChhhCcCHHHHhh
Confidence 111111111 112245666666 999999999999999976
No 292
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.18 E-value=1.5e-12 Score=127.02 Aligned_cols=111 Identities=21% Similarity=0.305 Sum_probs=77.4
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++...... ......||+.|+|||.......+.++||||+||+++||+||+.|+...... .....
T Consensus 144 kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~ 214 (321)
T 1tki_A 144 KIIEFGQARQLKPGD-NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--------QIIEN 214 (321)
T ss_dssp EECCCTTCEECCTTC-EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHH
T ss_pred EEEECCCCeECCCCC-ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH--------HHHHH
Confidence 468999998875433 234467899999999999888999999999999999999999997531110 00111
Q ss_pred ccCCCCCCCC---cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPS---CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~---~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+.......+. ....+++..+++ .|++.+|++||++.|+++
T Consensus 215 i~~~~~~~~~~~~~~~s~~~~~li~---~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 215 IMNAEYTFDEEAFKEISIEAMDFVD---RLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHHTCCCCCHHHHTTSCHHHHHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred HHcCCCCCChhhhccCCHHHHHHHH---HHcCCChhHCcCHHHHhc
Confidence 1111111000 012245666666 999999999999999976
No 293
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.17 E-value=2.2e-12 Score=126.88 Aligned_cols=112 Identities=23% Similarity=0.280 Sum_probs=73.5
Q ss_pred cccccCcccccCCCCC----CcccccccccccCcccccc--ceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCc
Q 010736 370 ITGDFGIAKFLKPDSS----NWTGFAGTYGYIAPELAYT--MKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNT 443 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~----~~~~~~gt~gy~aPE~~~~--~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~ 443 (502)
..+|||+++.+..... ......||..|+|||.... ..++.++||||||++++||+||+.|+......
T Consensus 210 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------- 282 (345)
T 3hko_A 210 KLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA------- 282 (345)
T ss_dssp EECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------
T ss_pred EEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChH-------
Confidence 4689999987643111 2234679999999999865 67889999999999999999999997532110
Q ss_pred ccccccccCCCCCCCC---cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 444 DIALDEMLDPRLPVPS---CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 444 ~~~~~~~~d~~l~~~~---~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.....+......... ....+++..+++ .|++.+|++||++.|+++
T Consensus 283 -~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 283 -DTISQVLNKKLCFENPNYNVLSPLARDLLS---NLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp -HHHHHHHHCCCCTTSGGGGGSCHHHHHHHH---HHSCSCTTTSCCHHHHHH
T ss_pred -HHHHHHHhcccccCCcccccCCHHHHHHHH---HHcCCChhHCCCHHHHhc
Confidence 001111111111000 012245666776 999999999999999976
No 294
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.17 E-value=2.5e-12 Score=128.11 Aligned_cols=111 Identities=21% Similarity=0.218 Sum_probs=77.1
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++....... .....||.+|+|||.......+.++|||||||+++||+||+.|+...... .....
T Consensus 229 kl~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--------~~~~~ 299 (373)
T 2x4f_A 229 KIIDFGLARRYKPREK-LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA--------ETLNN 299 (373)
T ss_dssp EECCCSSCEECCTTCB-CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHH
T ss_pred EEEeCCCceecCCccc-cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHH
Confidence 4689999998754332 23456999999999998888999999999999999999999997521110 00011
Q ss_pred ccCCCC--CCC-CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRL--PVP-SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l--~~~-~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+..... ... .....+++..+++ .|++.+|++||++.|+++
T Consensus 300 i~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 300 ILACRWDLEDEEFQDISEEAKEFIS---KLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHTCCCSCSGGGTTSCHHHHHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred HHhccCCCChhhhccCCHHHHHHHH---HHcCCChhhCCCHHHHhc
Confidence 111000 000 0112356667776 999999999999999976
No 295
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.17 E-value=4.7e-12 Score=122.64 Aligned_cols=62 Identities=26% Similarity=0.362 Sum_probs=44.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccccc-ceecccceeeeeceeeeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~-~~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
..+|||+++.............|+..|+|||...+ ...+.++||||+|++++||+||+.|+.
T Consensus 142 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 204 (311)
T 4agu_A 142 KLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWP 204 (311)
T ss_dssp EECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 46899999887644433445678999999999875 567999999999999999999999975
No 296
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.17 E-value=1.4e-12 Score=123.98 Aligned_cols=110 Identities=19% Similarity=0.289 Sum_probs=63.7
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccccccee-cccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKI-TEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALD 448 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~-s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~ 448 (502)
..+|||+++....... .....||..|+|||...+... +.++||||+|++++||+||+.|++..... ....
T Consensus 152 kl~Dfg~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~ 222 (275)
T 2eue_A 152 KIADFGLSNIMTDGNF-LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--------VLFK 222 (275)
T ss_dssp EECCSSCC----------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHH
T ss_pred EEeecccceeccCccc-ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--------HHHH
Confidence 3689999987654322 234568999999999887655 68999999999999999999997532100 0000
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 449 EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 449 ~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.+.......+ .....++.++++ .|++.+|++||++.|+++
T Consensus 223 ~~~~~~~~~~-~~~~~~~~~li~---~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 223 NISNGVYTLP-KFLSPGAAGLIK---RMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHTCCCCC-TTSCHHHHHHHH---HHSCSSGGGSCCHHHHTT
T ss_pred HHHhCCCCCC-ccCCHHHHHHHH---HHhhcCHhHCCCHHHHhh
Confidence 1111111101 112245666666 999999999999999964
No 297
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.17 E-value=3.2e-12 Score=125.12 Aligned_cols=120 Identities=24% Similarity=0.298 Sum_probs=69.6
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccc-eecccceeeeeceeeeehhcCCCCCCcccCCCC--------CC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTM-KITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSS--------PS 440 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~-~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~--------~~ 440 (502)
..+|||+++.+...........|+..|+|||...+. ..+.++||||+||+++||+||+.|+........ ..
T Consensus 164 kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 243 (331)
T 4aaa_A 164 KLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGN 243 (331)
T ss_dssp EECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCS
T ss_pred EEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Confidence 368999998775443333456789999999998765 688999999999999999999999753211000 00
Q ss_pred CC--------cccccccccCCCCCCCC------cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 441 LN--------TDIALDEMLDPRLPVPS------CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 441 ~~--------~~~~~~~~~d~~l~~~~------~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.. ..........+.+.... ....+++..+++ .|++.+|++||+++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 244 LIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAK---KCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHH---HHTCSSGGGSCCGGGGGG
T ss_pred CChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHH---HHhccCcccCCCHHHHhc
Confidence 00 00000011111111000 011245556665 999999999999999864
No 298
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.17 E-value=2.2e-12 Score=125.92 Aligned_cols=113 Identities=23% Similarity=0.413 Sum_probs=75.1
Q ss_pred cccccCcccccCCCC--CCcccccccccccCcccccccee-cccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDS--SNWTGFAGTYGYIAPELAYTMKI-TEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~--~~~~~~~gt~gy~aPE~~~~~~~-s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++.+.... .......||..|+|||....... +.++||||+||+++||+||+.|++....... .
T Consensus 145 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-------~ 217 (323)
T 3tki_A 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-------E 217 (323)
T ss_dssp EECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-------H
T ss_pred EEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-------H
Confidence 468999998764221 22235679999999999887765 7899999999999999999999863221100 0
Q ss_pred cccccCCCCC-CCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 447 LDEMLDPRLP-VPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 447 ~~~~~d~~l~-~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.......... .......+++..+++ .|++.+|++||++.|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 218 YSDWKEKKTYLNPWKKIDSAPLALLH---KILVENPSARITIPDIKK 261 (323)
T ss_dssp HHHHHTTCTTSTTGGGSCHHHHHHHH---HHSCSSTTTSCCHHHHTT
T ss_pred HHHHhcccccCCccccCCHHHHHHHH---HHccCChhhCcCHHHHhh
Confidence 0000000000 000112245556666 999999999999999865
No 299
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.16 E-value=1.2e-11 Score=121.91 Aligned_cols=121 Identities=18% Similarity=0.210 Sum_probs=76.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccc-eecccceeeeeceeeeehhcCCCCCCcccC-------------
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTM-KITEKCDVYSFGVLVLEVIKGKHPRDFLSS------------- 435 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~-~~s~k~Dvysfgv~llElltg~~p~~~~~~------------- 435 (502)
..+|||+++.+.......+...||..|+|||...+. ..+.++||||+||+++||+||+.|+.....
T Consensus 152 kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~ 231 (346)
T 1ua2_A 152 KLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGT 231 (346)
T ss_dssp EECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred EEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCC
Confidence 368999999875544444556789999999998654 478999999999999999999998752110
Q ss_pred CCCCCCCcccccccccC-CCCCCCC-----cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHH
Q 010736 436 TSSPSLNTDIALDEMLD-PRLPVPS-----CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQ 493 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~~d-~~l~~~~-----~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~ 493 (502)
.....|.......+.+. ...+... ....+++.++++ .|++.+|++||++.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 232 PTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQ---GLFLFNPCARITATQALKM 292 (346)
T ss_dssp CCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHH---HHHCSSTTTSCCHHHHHTS
T ss_pred CChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHH---HHhccChhhCCCHHHHhcC
Confidence 00001100000000000 0000000 111245666666 9999999999999999763
No 300
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.16 E-value=1.2e-12 Score=127.09 Aligned_cols=115 Identities=23% Similarity=0.367 Sum_probs=78.3
Q ss_pred ccccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccc
Q 010736 369 NITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALD 448 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~ 448 (502)
-..+|||+++.............|+..|+|||.......+.++||||||++++||+||+.|+....... ......
T Consensus 164 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~ 238 (314)
T 3com_A 164 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR-----AIFMIP 238 (314)
T ss_dssp EEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHH
T ss_pred EEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHh
Confidence 346899999877554333445678999999999998889999999999999999999999975311100 000000
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 449 EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 449 ~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
....+....+ ....+++..+++ .|++.+|++||++.|+++
T Consensus 239 ~~~~~~~~~~-~~~~~~l~~li~---~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 239 TNPPPTFRKP-ELWSDNFTDFVK---QCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HSCCCCCSSG-GGSCHHHHHHHH---HHTCSCTTTSCCHHHHTT
T ss_pred cCCCcccCCc-ccCCHHHHHHHH---HHccCChhhCcCHHHHHh
Confidence 0111111111 112245666666 999999999999999965
No 301
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.16 E-value=2.2e-12 Score=135.26 Aligned_cols=117 Identities=21% Similarity=0.339 Sum_probs=78.1
Q ss_pred CCCeeeecCCcc---------ccccCcccccCCCCCCcccccccccccCcccccc-ceecccceeeeeceeeeehhcCCC
Q 010736 359 KLGALNISRNNI---------TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGKH 428 (502)
Q Consensus 359 ~L~~L~l~~N~l---------~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~-~~~s~k~Dvysfgv~llElltg~~ 428 (502)
++.|.||+-.|| ++|||+++.+..... ....||+.|+|||.... ..++.++|+||+||+++||+||+.
T Consensus 312 gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~--~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~ 389 (689)
T 3v5w_A 312 FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389 (689)
T ss_dssp TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCC--CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CccccCCchHHeEEeCCCCEEecccceeeecCCCCC--CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 445555555444 699999998764432 34689999999999864 578999999999999999999999
Q ss_pred CCCcccCCCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCC
Q 010736 429 PRDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT 486 (502)
Q Consensus 429 p~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~ 486 (502)
|+..........+ ...+......-+ .....++..+++ .|++.+|++|++
T Consensus 390 PF~~~~~~~~~~i-----~~~i~~~~~~~p-~~~S~~a~dLI~---~lL~~dP~~Rl~ 438 (689)
T 3v5w_A 390 PFRQHKTKDKHEI-----DRMTLTMAVELP-DSFSPELRSLLE---GLLQRDVNRRLG 438 (689)
T ss_dssp TTCGGGCCCHHHH-----HHHHHHCCCCCC-TTSCHHHHHHHH---HHTCSCGGGCTT
T ss_pred CCCCCChHHHHHH-----HHhhcCCCCCCC-ccCCHHHHHHHH---HHccCCHhHCCC
Confidence 9853221110000 011111111111 122356677777 999999999998
No 302
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.16 E-value=7.4e-12 Score=122.03 Aligned_cols=119 Identities=20% Similarity=0.244 Sum_probs=75.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCC------------
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS------------ 437 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~------------ 437 (502)
..+|||+++...... ......|+..|+|||.......+.++||||||++++||+||+.|+.......
T Consensus 160 kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 238 (326)
T 1blx_A 160 KLADFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP 238 (326)
T ss_dssp EECSCCSCCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred EEecCcccccccCCC-CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCC
Confidence 368999998764322 2234578999999999998889999999999999999999999985321000
Q ss_pred -CCCCCccccc-ccccC----CCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 438 -SPSLNTDIAL-DEMLD----PRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 438 -~~~~~~~~~~-~~~~d----~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
...+...... ...+. ..+........+++..+++ .|++.+|++||++.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 239 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLL---KCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHH---HHSCSSTTTSCCHHHHHT
T ss_pred CcccCccccccchhhhcccCcchhhhccccCCHHHHHHHH---HHcCCCcccCCCHHHHhc
Confidence 0000000000 00000 0000000112345666666 999999999999999974
No 303
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.16 E-value=2.8e-12 Score=129.76 Aligned_cols=111 Identities=26% Similarity=0.378 Sum_probs=68.1
Q ss_pred ccccCcccccCCCCCCcccccccccccCccccc---cceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccc
Q 010736 371 TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAY---TMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIAL 447 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~---~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~ 447 (502)
.+|||+++...... ......||.+|+|||+.. ...++.++|||||||+++||+||+.|+....... ...
T Consensus 283 l~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~----- 354 (419)
T 3i6u_A 283 ITDFGHSKILGETS-LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLK----- 354 (419)
T ss_dssp ECCSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHH-----
T ss_pred EeecccceecCCCc-cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHH-----
Confidence 68999999875432 233567999999999975 3567889999999999999999999985321110 000
Q ss_pred ccccCCCCCCCC---cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 448 DEMLDPRLPVPS---CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 448 ~~~~d~~l~~~~---~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
..+......... ....+++..+++ .|++.+|++||+++|+++
T Consensus 355 ~~i~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 355 DQITSGKYNFIPEVWAEVSEKALDLVK---KLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHHTTCCCCCHHHHTTSCHHHHHHHH---HHSCSSTTTSCCHHHHHH
T ss_pred HHHhcCCCCCCchhhcccCHHHHHHHH---HHccCChhHCcCHHHHhC
Confidence 001111100000 011245556666 999999999999999875
No 304
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.16 E-value=2.6e-12 Score=122.47 Aligned_cols=107 Identities=27% Similarity=0.427 Sum_probs=72.6
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||++....... .....|+..|+|||...+...+.++||||+|++++||+||+.|++..... .....
T Consensus 149 ~l~Dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~ 218 (279)
T 3fdn_A 149 KIADFGWSVHAPSSR--RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--------ETYKR 218 (279)
T ss_dssp EECSCCEESCC----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHH
T ss_pred EEEeccccccCCccc--ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--------HHHHH
Confidence 368999986654322 23457899999999999888999999999999999999999997521100 00001
Q ss_pred c--cCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 M--LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~--~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+ .....+ ....+++..+++ .|++.+|++||++.||++
T Consensus 219 ~~~~~~~~~---~~~~~~~~~li~---~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 219 ISRVEFTFP---DFVTEGARDLIS---RLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp HHHTCCCCC---TTSCHHHHHHHH---HHCCSSGGGSCCHHHHHH
T ss_pred HHhCCCCCC---CcCCHHHHHHHH---HHhccChhhCCCHHHHhh
Confidence 1 111111 112345666666 999999999999999985
No 305
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.16 E-value=4e-12 Score=125.47 Aligned_cols=106 Identities=25% Similarity=0.406 Sum_probs=73.7
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............||..|+|||......++.++|+||+||+++||+||+.|+..... ......
T Consensus 161 kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~ 232 (353)
T 2i0e_A 161 KIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQS 232 (353)
T ss_dssp EECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHH
T ss_pred EEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--------HHHHHH
Confidence 368999998754433334457899999999999988899999999999999999999999752110 001111
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m 487 (502)
+......-+ .....++..+++ .|++.+|++||+.
T Consensus 233 i~~~~~~~p-~~~s~~~~~li~---~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 233 IMEHNVAYP-KSMSKEAVAICK---GLMTKHPGKRLGC 266 (353)
T ss_dssp HHHCCCCCC-TTSCHHHHHHHH---HHTCSCTTSCTTC
T ss_pred HHhCCCCCC-CCCCHHHHHHHH---HHhhcCHHHcCCC
Confidence 111111111 112355666776 9999999999964
No 306
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.16 E-value=2.8e-12 Score=125.90 Aligned_cols=115 Identities=25% Similarity=0.342 Sum_probs=58.0
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCC-CCCcccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSP-SLNTDIALD 448 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~-~~~~~~~~~ 448 (502)
..+|||+++...... .....||..|+|||......++.++||||||++++||+||+.|+......... .........
T Consensus 171 kl~Dfg~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 248 (336)
T 3fhr_A 171 KLTDFGFAKETTQNA--LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG 248 (336)
T ss_dssp EECCCTTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------
T ss_pred EEeccccceeccccc--cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcc
Confidence 368999998765322 23456899999999998889999999999999999999999998532221110 000000000
Q ss_pred cccCCCCCCC-CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 449 EMLDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 449 ~~~d~~l~~~-~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.. ..+.+ .....+++..+++ .|++.+|++||++.|+++
T Consensus 249 ~~---~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 249 QY---GFPNPEWSEVSEDAKQLIR---LLLKTDPTERLTITQFMN 287 (336)
T ss_dssp -----CCCTTTSTTCCHHHHHHHH---HHSCSSGGGSCCHHHHHH
T ss_pred cc---ccCchhhccCCHHHHHHHH---HHCCCChhHCcCHHHHhc
Confidence 00 01100 0112345666666 999999999999999986
No 307
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.16 E-value=4.8e-12 Score=123.13 Aligned_cols=124 Identities=19% Similarity=0.249 Sum_probs=79.9
Q ss_pred ccccCcccccCCCCCCcccccccccccCccccc--------cceecccceeeeeceeeeehhcCCCCCCcccCCCC----
Q 010736 371 TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAY--------TMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSS---- 438 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~--------~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~---- 438 (502)
.+|||+++....... .....||..|+|||... ...++.++|||||||+++||+||+.|+........
T Consensus 157 L~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~ 235 (319)
T 4euu_A 157 LTDFGAARELEDDEQ-FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235 (319)
T ss_dssp ECCCTTCEECCTTCC-BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHH
T ss_pred EccCCCceecCCCCc-eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHH
Confidence 689999998765432 23467999999999876 46788999999999999999999999753211100
Q ss_pred ---------CCCCccc-c-ccc--ccCCCCCCCC---cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhc
Q 010736 439 ---------PSLNTDI-A-LDE--MLDPRLPVPS---CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISA 498 (502)
Q Consensus 439 ---------~~~~~~~-~-~~~--~~d~~l~~~~---~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~ 498 (502)
....... . ... -.++.++... ....+.+..+++ .|++.+|++||+++|+++...+.+
T Consensus 236 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~---~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 236 MYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLA---NILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHH---HHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHH---HhccCChhhhccHHHhhhccHHHh
Confidence 0000000 0 000 0011111111 122344555555 999999999999999998877643
No 308
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.15 E-value=4.2e-12 Score=136.03 Aligned_cols=117 Identities=24% Similarity=0.388 Sum_probs=82.9
Q ss_pred CCCeeeecCCcc---------ccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCC
Q 010736 359 KLGALNISRNNI---------TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHP 429 (502)
Q Consensus 359 ~L~~L~l~~N~l---------~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p 429 (502)
++.|.||+..|| ++|||+++.............||..|+|||......++.++|+|||||+++||+||+.|
T Consensus 462 gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~P 541 (674)
T 3pfq_A 462 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541 (674)
T ss_dssp SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCS
T ss_pred CeEeccCChhhEEEcCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCC
Confidence 455666666655 68999999754444444567899999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCH
Q 010736 430 RDFLSSTSSPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487 (502)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m 487 (502)
+..... ......+......-+ .....++..+++ .|++.+|++||++
T Consensus 542 f~~~~~--------~~~~~~i~~~~~~~p-~~~s~~~~~li~---~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 542 FEGEDE--------DELFQSIMEHNVAYP-KSMSKEAVAICK---GLMTKHPGKRLGC 587 (674)
T ss_dssp SCCSSH--------HHHHHHHHSSCCCCC-TTSCHHHHHHHH---HHSCSSSTTCTTC
T ss_pred CCCCCH--------HHHHHHHHhCCCCCC-ccCCHHHHHHHH---HHccCCHHHCCCC
Confidence 853111 011112222222111 122356777777 9999999999997
No 309
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.15 E-value=2.8e-12 Score=125.30 Aligned_cols=111 Identities=19% Similarity=0.259 Sum_probs=76.1
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++....... .....||..|+|||......++.++||||+||+++||+||+.|+...... .....
T Consensus 158 kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~ 228 (326)
T 2y0a_A 158 KIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLAN 228 (326)
T ss_dssp EECCCTTCEECCTTSC-CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHH
T ss_pred EEEECCCCeECCCCCc-cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--------HHHHH
Confidence 4689999988754322 23467999999999998888999999999999999999999997421100 00000
Q ss_pred c--cCCCCCCC-CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 M--LDPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~--~d~~l~~~-~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+ ........ .....+++..+++ .|++.+|++||++.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 229 VSAVNYEFEDEYFSNTSALAKDFIR---RLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHTCCCCCHHHHTTSCHHHHHHHH---HHSCSSGGGSCCHHHHHH
T ss_pred HHhcCCCcCccccccCCHHHHHHHH---HHccCChhhCCCHHHHhc
Confidence 0 00111000 0011245556666 999999999999999975
No 310
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.15 E-value=1.1e-12 Score=125.51 Aligned_cols=111 Identities=22% Similarity=0.369 Sum_probs=73.6
Q ss_pred ccccCcccccCCCCCCcccccccccccCcccccc-ceecccceeeeeceeeeehhcCCCCC-CcccCCCCCCCCcccccc
Q 010736 371 TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGKHPR-DFLSSTSSPSLNTDIALD 448 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~-~~~s~k~Dvysfgv~llElltg~~p~-~~~~~~~~~~~~~~~~~~ 448 (502)
.+|||+++.... .....|+.+|+|||.... ...+.++||||||++++||+||+.|. ..... .....
T Consensus 162 l~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~--------~~~~~ 229 (289)
T 4fvq_A 162 LSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS--------QRKLQ 229 (289)
T ss_dssp ECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHHHH
T ss_pred eccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch--------HHHHH
Confidence 578888765432 123568889999999887 67899999999999999999965553 21100 00000
Q ss_pred cc-cCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcC
Q 010736 449 EM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499 (502)
Q Consensus 449 ~~-~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~ 499 (502)
.. ..+.++.. ..+++.++++ .|++.+|++||++.|+++.|+++..
T Consensus 230 ~~~~~~~~~~~---~~~~l~~li~---~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 230 FYEDRHQLPAP---KAAELANLIN---NCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp HHHTTCCCCCC---SSCTTHHHHH---HHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred HhhccCCCCCC---CCHHHHHHHH---HHcCCChhHCcCHHHHHHHHHHhcC
Confidence 00 01111111 1123455555 9999999999999999999998744
No 311
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.15 E-value=4.1e-12 Score=124.13 Aligned_cols=111 Identities=24% Similarity=0.361 Sum_probs=71.2
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............||..|+|||.......+.++||||+||+++||+||+.|+..... ......
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~ 232 (327)
T 3a62_A 161 KLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR--------KKTIDK 232 (327)
T ss_dssp EECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHH
T ss_pred EEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH--------HHHHHH
Confidence 368999998654433333456799999999999888899999999999999999999999753110 000111
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCC-----CHHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP-----TMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp-----~m~~v~~ 492 (502)
+......-+ ....+++..+++ .|++.+|++|| ++.|+.+
T Consensus 233 i~~~~~~~p-~~~~~~~~~li~---~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 233 ILKCKLNLP-PYLTQEARDLLK---KLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHHTCCCCC-TTSCHHHHHHHH---HHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHhCCCCCC-CCCCHHHHHHHH---HHHhcCHhhccCCCCCCHHHHHc
Confidence 111111111 112355666776 99999999999 6667653
No 312
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.15 E-value=1.8e-12 Score=127.23 Aligned_cols=109 Identities=25% Similarity=0.398 Sum_probs=78.0
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............|+..|+|||.......+.++||||||++++||+||+.|++..... .....
T Consensus 181 kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~ 252 (335)
T 2owb_A 181 KIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--------ETYLR 252 (335)
T ss_dssp EECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHH
T ss_pred EEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--------HHHHH
Confidence 4689999988764443344567999999999998888999999999999999999999997531100 00000
Q ss_pred cc--CCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 ML--DPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~--d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+. ...++. ....++..+++ .|++.+|++||++.|+++
T Consensus 253 ~~~~~~~~~~---~~~~~~~~li~---~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 253 IKKNEYSIPK---HINPVAASLIQ---KMLQTDPTARPTINELLN 291 (335)
T ss_dssp HHHTCCCCCT---TSCHHHHHHHH---HHTCSSGGGSCCGGGGGG
T ss_pred HhcCCCCCCc---cCCHHHHHHHH---HHccCChhHCcCHHHHhc
Confidence 11 111111 12245666666 999999999999999976
No 313
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.15 E-value=1.6e-12 Score=128.00 Aligned_cols=107 Identities=25% Similarity=0.397 Sum_probs=75.8
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.............||..|+|||...+..++.++|+||+||+++||+||+.|+..... ......
T Consensus 158 kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~ 229 (345)
T 1xjd_A 158 KIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--------EELFHS 229 (345)
T ss_dssp EECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHH
T ss_pred EEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--------HHHHHH
Confidence 368999998754433334567899999999999988899999999999999999999999752110 000011
Q ss_pred c--cCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHH-HH
Q 010736 450 M--LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMK-IV 490 (502)
Q Consensus 450 ~--~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~-~v 490 (502)
+ ..+..+. ...+++..+++ .|++.+|++||++. ||
T Consensus 230 i~~~~~~~p~---~~s~~~~~li~---~lL~~dp~~R~~~~~~i 267 (345)
T 1xjd_A 230 IRMDNPFYPR---WLEKEAKDLLV---KLFVREPEKRLGVRGDI 267 (345)
T ss_dssp HHHCCCCCCT---TSCHHHHHHHH---HHSCSSGGGSBTTBSCG
T ss_pred HHhCCCCCCc---ccCHHHHHHHH---HHhcCCHhHcCCChHHH
Confidence 1 1112221 12345666766 99999999999987 55
No 314
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.15 E-value=1.2e-12 Score=128.52 Aligned_cols=110 Identities=27% Similarity=0.423 Sum_probs=74.1
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccc----cceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAY----TMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDI 445 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~----~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~ 445 (502)
..+|||+++...... ..+...||.+|+|||... ...++.++|||||||+++||+||+.|++..... ..
T Consensus 194 kl~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-------~~ 265 (340)
T 3an0_A 194 KMCDFGISGYLVDSV-AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-------FQ 265 (340)
T ss_dssp EECCCSHHHHHSCHH-HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-------HH
T ss_pred EEeeCCCceeccccc-ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-------HH
Confidence 368999998774321 122357899999999963 346889999999999999999999998532110 00
Q ss_pred ccccc---cCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 446 ALDEM---LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 446 ~~~~~---~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
....+ ..+... .....+++..+++ .|++.+|++||++.||++
T Consensus 266 ~~~~~~~~~~~~~~--~~~~~~~~~~li~---~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 266 QLKQVVEEPSPQLP--ADKFSAEFVDFTS---QCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HHHHHHHSCCCCCC--GGGSCHHHHHHHH---HHTCSSGGGSCCHHHHTT
T ss_pred HHHHHhcCCCCCCC--cccCCHHHHHHHH---HHccCCcccCcCHHHHhc
Confidence 01111 111111 1112345666666 999999999999999976
No 315
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.14 E-value=3.6e-12 Score=124.65 Aligned_cols=62 Identities=21% Similarity=0.262 Sum_probs=45.6
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccc-eecccceeeeeceeeeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTM-KITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~-~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
..+|||+++.........+...||..|+|||...+. .++.++||||+||+++||+||+.|+.
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 239 (329)
T 3gbz_A 177 KIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFP 239 (329)
T ss_dssp EECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 368999998875443344456789999999998764 47999999999999999999999975
No 316
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.14 E-value=3.2e-12 Score=122.04 Aligned_cols=114 Identities=26% Similarity=0.384 Sum_probs=76.8
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++...... ......|+.+|+|||...+...+.++||||+|++++||+||+.|+...... ....... ..
T Consensus 148 kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---~~~~~~~-~~ 222 (284)
T 3kk8_A 148 KLADFGLAIEVNDSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYAQIK-AG 222 (284)
T ss_dssp EECCCTTCEECCSSC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH-HT
T ss_pred EEeeceeeEEcccCc-cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh---HHHHHHH-hc
Confidence 368999998765432 233467999999999999988999999999999999999999997421110 0000000 00
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
......+.. ....+++..+++ .|++.+|++||++.|+++
T Consensus 223 ~~~~~~~~~-~~~~~~~~~li~---~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 223 AYDYPSPEW-DTVTPEAKSLID---SMLTVNPKKRITADQALK 261 (284)
T ss_dssp CCCCCTTTT-TTSCHHHHHHHH---HHSCSSTTTSCCHHHHTT
T ss_pred cccCCchhh-cccCHHHHHHHH---HHcccChhhCCCHHHHhc
Confidence 011000000 112345666666 999999999999999976
No 317
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.14 E-value=4e-12 Score=124.06 Aligned_cols=120 Identities=12% Similarity=0.167 Sum_probs=69.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccccc-ceecccceeeeeceeeeehhcCCCCCCcccCC------------
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGKHPRDFLSST------------ 436 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~-~~~s~k~Dvysfgv~llElltg~~p~~~~~~~------------ 436 (502)
..+|||+++.............||..|+|||...+ ..++.++||||+||+++||+||+.|+......
T Consensus 140 kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~ 219 (324)
T 3mtl_A 140 KLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGT 219 (324)
T ss_dssp EECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred EEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 47899999876544433445678999999999876 56799999999999999999999998532100
Q ss_pred -CCCCCCcccc---cccccCCCCCCC-----CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 437 -SSPSLNTDIA---LDEMLDPRLPVP-----SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 437 -~~~~~~~~~~---~~~~~d~~l~~~-----~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
....+..... ......+..... .....+++..+++ .|++.+|++||+++||++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 220 PTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLT---KLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHH---HHSCSSGGGSCCHHHHTT
T ss_pred CChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHH---HHcCcCcccCCCHHHHhc
Confidence 0000100000 000000110000 0011244556666 999999999999999965
No 318
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.14 E-value=1.7e-12 Score=128.91 Aligned_cols=114 Identities=17% Similarity=0.171 Sum_probs=73.3
Q ss_pred cccEEECcCCcCcccCCccc-----cCCCCCcEEEccCCccccc----cCcccccCCCCcEEeCCCCcccccc----Ccc
Q 010736 263 VLTKLSLDDNHFTSYLPQNI-----CRGGALQIFTVSENRFQGT----IPKSLRNCTSLIRVRLDGNNLTGNI----SKA 329 (502)
Q Consensus 263 ~L~~L~ls~N~l~~~~~~~~-----~~~~~L~~L~ls~n~l~~~----~~~~l~~l~~L~~L~l~~N~l~~~~----~~~ 329 (502)
.++.|++++|.++......+ ...++|+.|++++|.++.. ++..+..+++|++|+|++|.+++.. ...
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~ 206 (372)
T 3un9_A 127 RARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQ 206 (372)
T ss_dssp TEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHH
T ss_pred hccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHH
Confidence 45556666665544322222 2346778888888877642 3344566778888888888887532 344
Q ss_pred cCCCCCCcEEEccCcccccc----cCccccCCCCCCeeeecCCccccccCcc
Q 010736 330 FGIYPNLTFIDLSRNNFYGE----ISSNFGECPKLGALNISRNNITGDFGIA 377 (502)
Q Consensus 330 ~~~l~~L~~L~Ls~N~l~~~----~~~~~~~~~~L~~L~l~~N~l~~dfGl~ 377 (502)
+...++|+.|+|++|.|+.. +...+...+.|++||+++|+|. |.|..
T Consensus 207 L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~-~~g~~ 257 (372)
T 3un9_A 207 LDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS-SEGRQ 257 (372)
T ss_dssp GGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCC-HHHHH
T ss_pred HhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCC-HHHHH
Confidence 55667888888888888653 2334456688899999988864 33443
No 319
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.14 E-value=4.2e-12 Score=123.68 Aligned_cols=103 Identities=24% Similarity=0.411 Sum_probs=73.7
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccccccee-cccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKI-TEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALD 448 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~-s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~ 448 (502)
..+|||+++...... .....||..|+|||....... +.++||||||++++||+||+.|++.... ... ..
T Consensus 190 kL~Dfg~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~---~~ 259 (320)
T 3a99_A 190 KLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----IIR---GQ 259 (320)
T ss_dssp EECCCTTCEECCSSC--BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----HHH---CC
T ss_pred EEeeCcccccccccc--ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-----hhc---cc
Confidence 478999998775432 234578999999999877665 7889999999999999999999753110 000 00
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 449 EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 449 ~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
....+ ...+++..+++ .|++.+|++||++.||++
T Consensus 260 ~~~~~-------~~~~~~~~li~---~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 260 VFFRQ-------RVSSECQHLIR---WCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CCCSS-------CCCHHHHHHHH---HHTCSSGGGSCCHHHHHT
T ss_pred ccccc-------cCCHHHHHHHH---HHccCChhhCcCHHHHhc
Confidence 00111 12245666666 999999999999999976
No 320
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.13 E-value=7.2e-12 Score=123.99 Aligned_cols=61 Identities=30% Similarity=0.415 Sum_probs=50.1
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccc-eecccceeeeeceeeeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTM-KITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~-~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
..+|||+++....... .....||.+|+|||...+. .++.++|||||||+++||+||+.|+.
T Consensus 172 kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~ 233 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSEP-NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFR 233 (360)
T ss_dssp EECCCTTCBCCCTTSC-CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEeeCCCceecCCCCC-cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcC
Confidence 4789999988764332 2345789999999998654 48999999999999999999999985
No 321
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.13 E-value=9.5e-12 Score=125.94 Aligned_cols=119 Identities=22% Similarity=0.221 Sum_probs=75.3
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccc-eecccceeeeeceeeeehhcCCCCCCcccCCCC-CCCCc----
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTM-KITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSS-PSLNT---- 443 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~-~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~-~~~~~---- 443 (502)
.++|||+++.+..... .....||..|+|||...+. .++.++|||||||+++||+||+.|+........ ..+..
T Consensus 197 kl~DFG~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~ 275 (420)
T 1j1b_A 197 KLCDFGSAKQLVRGEP-NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 275 (420)
T ss_dssp EECCCTTCEECCTTCC-CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCS
T ss_pred EeccchhhhhcccCCC-ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 3799999997754322 2345689999999998654 689999999999999999999999853211000 00000
Q ss_pred ---------ccccccccCCCCCCC------CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 444 ---------DIALDEMLDPRLPVP------SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 444 ---------~~~~~~~~d~~l~~~------~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.....+...|.+... ......++..+++ .|++.+|++||++.|+++
T Consensus 276 p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~---~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 276 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCS---RLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHH---HHSCSSGGGSCCHHHHHT
T ss_pred CCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHH---HhccCChhHCCCHHHHhC
Confidence 000011111111100 0011245666666 999999999999999874
No 322
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.13 E-value=4.1e-12 Score=121.75 Aligned_cols=111 Identities=22% Similarity=0.368 Sum_probs=72.5
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++..... ......|+..|+|||... ...+.++||||+|++++||+||+.|+....... .... .....
T Consensus 172 kl~Dfg~~~~~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~-~~~~~ 245 (290)
T 1t4h_A 172 KIGDLGLATLKRAS--FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAA--QIYR-RVTSG 245 (290)
T ss_dssp EECCTTGGGGCCTT--SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH--HHHH-HHTTT
T ss_pred EEeeCCCccccccc--ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH--HHHH-HHhcc
Confidence 46899999765432 223467899999999876 458999999999999999999999975321100 0000 00000
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
...+... .....++..+++ .|++.+|++||++.||++
T Consensus 246 ~~~~~~~---~~~~~~l~~li~---~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 246 VKPASFD---KVAIPEVKEIIE---GCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CCCGGGG---GCCCHHHHHHHH---HHSCSSGGGSCCHHHHHT
T ss_pred CCccccC---CCCCHHHHHHHH---HHccCChhhCCCHHHHhh
Confidence 0000110 011134556665 999999999999999975
No 323
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.13 E-value=2.3e-12 Score=128.88 Aligned_cols=113 Identities=22% Similarity=0.243 Sum_probs=77.7
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccc-c
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIAL-D 448 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~-~ 448 (502)
..+|||+++....... .....||..|+|||.......+.++||||+||+++||+||+.|+...... ........ .
T Consensus 191 kL~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~---~~~~~i~~~~ 266 (387)
T 1kob_A 191 KIIDFGLATKLNPDEI-VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL---ETLQNVKRCD 266 (387)
T ss_dssp EECCCTTCEECCTTSC-EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHHHHHHCC
T ss_pred EEEecccceecCCCcc-eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH---HHHHHHHhCC
Confidence 4689999998765332 23457999999999999888999999999999999999999997531110 00000000 0
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 449 EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 449 ~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
...++... ....+++..+++ .|++.+|++||++.|+++
T Consensus 267 ~~~~~~~~---~~~s~~~~~li~---~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 267 WEFDEDAF---SSVSPEAKDFIK---NLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp CCCCSSTT---TTSCHHHHHHHH---TTSCSSGGGSCCHHHHHT
T ss_pred CCCCcccc---ccCCHHHHHHHH---HHcCCChhHCcCHHHHhh
Confidence 00111111 112345666766 999999999999999975
No 324
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.13 E-value=5.2e-12 Score=125.97 Aligned_cols=112 Identities=28% Similarity=0.447 Sum_probs=74.3
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccccc---ceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT---MKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~---~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~ 446 (502)
.++|||+++.+.... ......||.+|+|||.... ..++.++||||+||+++||+||+.|+.......... .
T Consensus 155 kL~DFG~a~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~-----~ 228 (384)
T 4fr4_A 155 HITDFNIAAMLPRET-QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE-----I 228 (384)
T ss_dssp EECCCTTCEECCTTC-CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHH-----H
T ss_pred EEeccceeeeccCCC-ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHH-----H
Confidence 368999999875433 2345789999999999864 347899999999999999999999985322111000 0
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCC-HHHHH
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT-MKIVS 491 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~-m~~v~ 491 (502)
...+.......+ .....++..+++ .|++.+|++||+ +.+|.
T Consensus 229 ~~~~~~~~~~~p-~~~s~~~~~li~---~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 229 VHTFETTVVTYP-SAWSQEMVSLLK---KLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp HHHHHHCCCCCC-TTSCHHHHHHHH---HHSCSSGGGSCCSHHHHH
T ss_pred HHHHhhcccCCC-CcCCHHHHHHHH---HHhcCCHhHhcccHHHHH
Confidence 001101111101 112355667777 999999999998 66654
No 325
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.13 E-value=2.3e-11 Score=116.95 Aligned_cols=119 Identities=20% Similarity=0.216 Sum_probs=75.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccce-ecccceeeeeceeeeehhcCCCCCCcccCC------------
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMK-ITEKCDVYSFGVLVLEVIKGKHPRDFLSST------------ 436 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~-~s~k~Dvysfgv~llElltg~~p~~~~~~~------------ 436 (502)
..+|||+++.............|+..|+|||...+.. .+.++||||||++++||+||+.|+......
T Consensus 143 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 222 (299)
T 2r3i_A 143 KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222 (299)
T ss_dssp EECSTTHHHHHCCCSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred EECcchhhhhccCCccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCC
Confidence 4689999987754333334456899999999987665 789999999999999999999998532110
Q ss_pred -CCCCCCcccccccccCCCCCCC--------CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 437 -SSPSLNTDIALDEMLDPRLPVP--------SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 437 -~~~~~~~~~~~~~~~d~~l~~~--------~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
....+.. ........+..+.. .....+++.++++ .|++.+|++||++.|+++
T Consensus 223 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 223 PDEVVWPG-VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLS---QMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCTTTSTT-GGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHH---HHTCSSTTTSCCHHHHHT
T ss_pred CchhhhhH-hhcCcccchhhhcccchhhHhhCCCCCHHHHHHHH---HhcCcCcccCCCHHHHhc
Confidence 0000000 00000011111100 0012245666666 999999999999999976
No 326
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.13 E-value=8.8e-12 Score=127.74 Aligned_cols=61 Identities=28% Similarity=0.328 Sum_probs=46.6
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
.++|||+++...... ..+...||..|+|||...+..++.++||||+||+++||+||+.|+.
T Consensus 204 kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~ 264 (464)
T 3ttj_A 204 KILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 264 (464)
T ss_dssp EECCCCCC-----CC-CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEEEEeeeecCCCc-ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCC
Confidence 379999998775432 2345679999999999999999999999999999999999999985
No 327
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.12 E-value=5.8e-12 Score=124.72 Aligned_cols=111 Identities=18% Similarity=0.249 Sum_probs=76.5
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++...... ......||.+|+|||......++.++||||+||+++||+||+.|+...... .....
T Consensus 159 kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~--------~~~~~ 229 (361)
T 2yab_A 159 KLIDFGLAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLAN 229 (361)
T ss_dssp EECCCSSCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHH
T ss_pred EEEecCCceEcCCCC-ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHH
Confidence 368999998875432 234567999999999998888999999999999999999999997421100 00011
Q ss_pred ccCCCCCCCC---cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPS---CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~---~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+......-+. ....+++..+++ .|+..+|++||++.|+++
T Consensus 230 i~~~~~~~~~~~~~~~s~~~~~li~---~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 230 ITAVSYDFDEEFFSQTSELAKDFIR---KLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHTTCCCCCHHHHTTSCHHHHHHHH---HHSCSSTTTSCCHHHHHT
T ss_pred HHhcCCCCCchhccCCCHHHHHHHH---HHCCCChhHCcCHHHHhc
Confidence 1111100000 012245666666 999999999999999864
No 328
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.12 E-value=5.5e-12 Score=126.68 Aligned_cols=123 Identities=20% Similarity=0.259 Sum_probs=79.6
Q ss_pred ccccCcccccCCCCCCcccccccccccCcccccc--------ceecccceeeeeceeeeehhcCCCCCCcccCCCCC-CC
Q 010736 371 TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT--------MKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSP-SL 441 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~--------~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~-~~ 441 (502)
.+|||+++....... .....||..|+|||.... ..++.++|||||||+++||+||+.|+......... ..
T Consensus 157 L~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~ 235 (396)
T 4eut_A 157 LTDFGAARELEDDEQ-FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235 (396)
T ss_dssp ECCGGGCEECCCGGG-SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHH
T ss_pred EecCCCceEccCCCc-cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHH
Confidence 689999988754322 234679999999999765 56788999999999999999999997532211100 00
Q ss_pred Cc-------ccc---cccc------cCCCCCCCC---cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhh
Q 010736 442 NT-------DIA---LDEM------LDPRLPVPS---CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRIS 497 (502)
Q Consensus 442 ~~-------~~~---~~~~------~d~~l~~~~---~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~ 497 (502)
.. ... .... ..+.++... ....+.+..+++ .|++.+|++||++.|+++.++.+
T Consensus 236 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~---~~L~~dP~~R~s~~e~l~~l~~i 307 (396)
T 4eut_A 236 MYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLA---NILEADQEKCWGFDQFFAETSDI 307 (396)
T ss_dssp HHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHH---HHSCCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHH---HhhccChhhhccHHHHHHHHHHH
Confidence 00 000 0000 011111111 112334555555 99999999999999999999876
No 329
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.12 E-value=1.3e-12 Score=127.72 Aligned_cols=110 Identities=21% Similarity=0.363 Sum_probs=72.5
Q ss_pred cccccCcccccCCCC------------CCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCC
Q 010736 370 ITGDFGIAKFLKPDS------------SNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS 437 (502)
Q Consensus 370 l~~dfGl~~ll~~~~------------~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~ 437 (502)
..+|||+++...... .......||..|+|||...+..++.++||||+||+++||+||..|.....
T Consensus 204 kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~--- 280 (332)
T 3qd2_B 204 KVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV--- 280 (332)
T ss_dssp EECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH---
T ss_pred EEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH---
Confidence 468999999875432 11234569999999999998899999999999999999999987742100
Q ss_pred CCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 438 SPSLNTDIALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 438 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.....+.....+........++..+++ .|++.+|++||++.|+++
T Consensus 281 -------~~~~~~~~~~~~~~~~~~~~~~~~li~---~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 281 -------RIITDVRNLKFPLLFTQKYPQEHMMVQ---DMLSPSPTERPEATDIIE 325 (332)
T ss_dssp -------HHHHHHHTTCCCHHHHHHCHHHHHHHH---HHHCSSGGGSCCHHHHHH
T ss_pred -------HHHHHhhccCCCcccccCChhHHHHHH---HHccCCCCcCCCHHHHhh
Confidence 000111111111000011123444554 999999999999999975
No 330
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.12 E-value=1e-11 Score=126.08 Aligned_cols=59 Identities=20% Similarity=0.289 Sum_probs=50.6
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
.++|||+++...... ....||..|+|||...+..++.++|||||||+++||+||+.|+.
T Consensus 242 kL~DFG~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~ 300 (429)
T 3kvw_A 242 KVIDFGSSCYEHQRV---YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP 300 (429)
T ss_dssp EECCCTTCEETTCCC---CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEeecccceecCCcc---cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCC
Confidence 468999998764322 24578999999999999999999999999999999999999975
No 331
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.12 E-value=6.9e-12 Score=119.11 Aligned_cols=113 Identities=23% Similarity=0.415 Sum_probs=74.6
Q ss_pred cccccCcccccCCCC--CCcccccccccccCcccccccee-cccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDS--SNWTGFAGTYGYIAPELAYTMKI-TEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~--~~~~~~~gt~gy~aPE~~~~~~~-s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++...... .......|+.+|+|||....... +.++||||||++++||+||+.|++....... .
T Consensus 145 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-------~ 217 (276)
T 2yex_A 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-------E 217 (276)
T ss_dssp EECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-------H
T ss_pred EEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-------H
Confidence 468999998764321 12234678999999999887664 7899999999999999999999863221100 0
Q ss_pred cccccCCCC-CCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 447 LDEMLDPRL-PVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 447 ~~~~~d~~l-~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
......... ........+++.++++ .|++.+|++||+++||++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~li~---~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 218 YSDWKEKKTYLNPWKKIDSAPLALLH---KILVENPSARITIPDIKK 261 (276)
T ss_dssp HHHHHTTCTTSTTGGGSCHHHHHHHH---HHSCSSTTTSCCHHHHTT
T ss_pred HHHhhhcccccCchhhcCHHHHHHHH---HHCCCCchhCCCHHHHhc
Confidence 000000000 0000112345666666 999999999999999865
No 332
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.12 E-value=2.7e-12 Score=124.49 Aligned_cols=115 Identities=24% Similarity=0.358 Sum_probs=66.9
Q ss_pred cccccCcccccCCCCC---CcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSS---NWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~---~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++.+..... ......||..|+|||...+..++.++||||||++++||+||+.|+...... .......
T Consensus 156 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~---~~~~~~~ 232 (311)
T 3ork_A 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV---SVAYQHV 232 (311)
T ss_dssp EECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHH
T ss_pred EEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHh
Confidence 4789999987754322 122356899999999999889999999999999999999999997532110 0000000
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 447 LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 447 ~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
......+... .....+++..+++ .|++.+|++||+..++++
T Consensus 233 ~~~~~~~~~~--~~~~~~~l~~li~---~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 233 REDPIPPSAR--HEGLSADLDAVVL---KALAKNPENRYQTAAEMR 273 (311)
T ss_dssp HCCCCCHHHH--STTCCHHHHHHHH---HHTCSSGGGSCSSHHHHH
T ss_pred cCCCCCcccc--cCCCCHHHHHHHH---HHHhcCHhhChhhHHHHH
Confidence 0000000000 0012245666666 999999999997776553
No 333
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.11 E-value=9.1e-12 Score=121.29 Aligned_cols=111 Identities=18% Similarity=0.248 Sum_probs=76.0
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++....... .....||..|+|||.......+.++||||+|++++||+||+.|+...... .....
T Consensus 159 kl~Dfg~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~ 229 (321)
T 2a2a_A 159 KLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLAN 229 (321)
T ss_dssp EECCCTTCEECCTTCC-CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHH
T ss_pred EEccCccceecCcccc-ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--------HHHHH
Confidence 3689999987754322 23457899999999998888999999999999999999999997421100 00001
Q ss_pred ccCCCCCCCC---cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPS---CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~---~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+.......+. ....+++..+++ .|++.+|++||++.|+++
T Consensus 230 i~~~~~~~~~~~~~~~~~~~~~li~---~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 230 ITSVSYDFDEEFFSHTSELAKDFIR---KLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHTTCCCCCHHHHTTCCHHHHHHHH---TTSCSSTTTSCCHHHHHH
T ss_pred HHhcccccChhhhcccCHHHHHHHH---HHcCCChhhCcCHHHHhc
Confidence 1000000000 011245666666 999999999999999975
No 334
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.11 E-value=6.8e-12 Score=119.86 Aligned_cols=109 Identities=25% Similarity=0.333 Sum_probs=76.2
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++...... .....|+..|+|||...+...+.++||||||++++||+||+.|++..... .....
T Consensus 154 kl~Dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~ 223 (284)
T 2vgo_A 154 KIADFGWSVHAPSLR--RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--------ETHRR 223 (284)
T ss_dssp EECCCTTCEECSSSC--BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHH
T ss_pred EEecccccccCcccc--cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--------HHHHH
Confidence 468999987664322 23457899999999999888999999999999999999999997532110 00111
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+......-+ ....+++..+++ .|++.+|++||++.|+++
T Consensus 224 ~~~~~~~~~-~~~~~~~~~li~---~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 224 IVNVDLKFP-PFLSDGSKDLIS---KLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHTTCCCCC-TTSCHHHHHHHH---HHSCSSGGGSCCHHHHHT
T ss_pred HhccccCCC-CcCCHHHHHHHH---HHhhcCHhhCCCHHHHhh
Confidence 111111111 112245666666 999999999999999975
No 335
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.11 E-value=7.8e-12 Score=118.82 Aligned_cols=111 Identities=19% Similarity=0.320 Sum_probs=67.0
Q ss_pred ccccccCcccccCCCCCCcccccccccccCcccccccee-cccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccc
Q 010736 369 NITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKI-TEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIAL 447 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~-s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~ 447 (502)
-..+|||+++....... .....|+..|+|||...+... +.++||||+|++++||+||+.|++..... ...
T Consensus 150 ~~l~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~ 220 (276)
T 2h6d_A 150 AKIADFGLSNMMSDGEF-LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--------TLF 220 (276)
T ss_dssp EEECCCCGGGCCCC--------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHH
T ss_pred EEEeecccccccCCCcc-eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--------HHH
Confidence 34689999987754322 223568899999999887654 68999999999999999999997531100 000
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 448 DEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 448 ~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
..+.......+ .....++..+++ .|++.+|++||++.||++
T Consensus 221 ~~~~~~~~~~~-~~~~~~l~~li~---~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 221 KKIRGGVFYIP-EYLNRSVATLLM---HMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp HHHHHCCCCCC-TTSCHHHHHHHH---HHTCSSGGGSCCHHHHHH
T ss_pred HHhhcCcccCc-hhcCHHHHHHHH---HHccCChhhCCCHHHHHh
Confidence 01100000001 112245666666 999999999999999986
No 336
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.10 E-value=1.8e-11 Score=122.30 Aligned_cols=59 Identities=22% Similarity=0.284 Sum_probs=51.2
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
..+|||+++..... .....||..|+|||...+..++.++|||||||+++||+||+.|+.
T Consensus 201 kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~ 259 (382)
T 2vx3_A 201 KIVDFGSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259 (382)
T ss_dssp EECCCTTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEeccCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 47899999887532 234678999999999999899999999999999999999999985
No 337
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.10 E-value=9.4e-12 Score=127.60 Aligned_cols=111 Identities=23% Similarity=0.366 Sum_probs=77.1
Q ss_pred ccccccCcccccCCCCCCcccccccccccCcccccccee-cccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccc
Q 010736 369 NITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKI-TEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIAL 447 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~-s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~ 447 (502)
-..+|||+++....... .....||..|+|||...+... +.++||||+||+++||+||+.|++.... . ...
T Consensus 155 vkL~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~---~-----~~~ 225 (476)
T 2y94_A 155 AKIADFGLSNMMSDGEF-LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV---P-----TLF 225 (476)
T ss_dssp EEECCCSSCEECCTTCC-BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS---H-----HHH
T ss_pred eEEEeccchhhcccccc-ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH---H-----HHH
Confidence 34799999998754332 234679999999999887655 6899999999999999999999853211 0 011
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 448 DEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 448 ~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
..+.+.....+ .....++..+++ .|++.+|++||++.|+++
T Consensus 226 ~~i~~~~~~~p-~~~s~~~~~Li~---~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 226 KKICDGIFYTP-QYLNPSVISLLK---HMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp HHHHTTCCCCC-TTCCHHHHHHHH---HHTCSSTTTSCCHHHHHT
T ss_pred HHHhcCCcCCC-ccCCHHHHHHHH---HHcCCCchhCcCHHHHHh
Confidence 11222211111 112245666666 999999999999999976
No 338
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.10 E-value=5.9e-12 Score=124.54 Aligned_cols=114 Identities=22% Similarity=0.405 Sum_probs=73.8
Q ss_pred cccccCcccccCCCC-CCcccccccccccCcccccc--ceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDS-SNWTGFAGTYGYIAPELAYT--MKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~-~~~~~~~gt~gy~aPE~~~~--~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++...... .......||..|+|||...+ ...+.++|||||||+++||+||+.|+......... .. .
T Consensus 199 kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~---~~-~ 274 (355)
T 1vzo_A 199 VLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ---AE-I 274 (355)
T ss_dssp EESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH---HH-H
T ss_pred EEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchH---HH-H
Confidence 478999998764322 22234679999999999875 45788999999999999999999998532211110 00 0
Q ss_pred cccc--cCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCC-----CHHHHHHH
Q 010736 447 LDEM--LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP-----TMKIVSQQ 493 (502)
Q Consensus 447 ~~~~--~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp-----~m~~v~~~ 493 (502)
...+ ..+..+ .....++..+++ .|++.+|++|| ++.|+++.
T Consensus 275 ~~~~~~~~~~~~---~~~~~~~~~li~---~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 275 SRRILKSEPPYP---QEMSALAKDLIQ---RLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp HHHHHHCCCCCC---TTSCHHHHHHHH---HHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred HHHHhccCCCCC---cccCHHHHHHHH---HHhhhCHHHhcCCCCCCHHHHHcC
Confidence 0111 111221 112245556666 99999999999 88988653
No 339
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.10 E-value=9.7e-12 Score=123.73 Aligned_cols=61 Identities=31% Similarity=0.357 Sum_probs=42.3
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
..+|||+++...... ..+...||..|+|||...+..++.++||||+||+++||+||+.|+.
T Consensus 167 kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 227 (371)
T 2xrw_A 167 KILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 227 (371)
T ss_dssp EECCCCC-----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEEeeccccccccc-ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 368999998765322 2234578999999999998889999999999999999999999985
No 340
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.10 E-value=6.8e-12 Score=121.79 Aligned_cols=114 Identities=25% Similarity=0.353 Sum_probs=66.0
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccc-----cceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAY-----TMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTD 444 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~-----~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~ 444 (502)
..+|||+++....... .....|+..|+|||... ...++.++||||||++++||+||+.|++...... ....
T Consensus 165 kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~- 240 (318)
T 2dyl_A 165 KLCDFGISGRLVDDKA-KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF--EVLT- 240 (318)
T ss_dssp EECCCTTC---------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH--HHHH-
T ss_pred EEEECCCchhccCCcc-ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH--HHHH-
Confidence 4689999987654322 23456899999999984 4567889999999999999999999975321100 0000
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 445 IALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 445 ~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
....-..+.++.. .....++..+++ .|++.+|++||++.|+++
T Consensus 241 -~~~~~~~~~~~~~-~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 241 -KVLQEEPPLLPGH-MGFSGDFQSFVK---DCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp -HHHHSCCCCCCSS-SCCCHHHHHHHH---HHTCSCTTTSCCHHHHTT
T ss_pred -HHhccCCCCCCcc-CCCCHHHHHHHH---HHccCChhHCcCHHHHhh
Confidence 0000011112111 112345666666 999999999999999875
No 341
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.10 E-value=9.9e-12 Score=123.17 Aligned_cols=114 Identities=21% Similarity=0.315 Sum_probs=66.4
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceeccc-ceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEK-CDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALD 448 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k-~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~ 448 (502)
..+|||+++...... ......||..|+|||.........+ +||||+||+++||+||+.|+....... ... ....
T Consensus 158 kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~--~~~~ 232 (361)
T 3uc3_A 158 KICDFGYSKSSVLHS-QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYR--KTIQ 232 (361)
T ss_dssp EECCCCCC----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHH--HHHH
T ss_pred EEeecCccccccccC-CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHH--HHHH
Confidence 368999998543322 1234569999999999887776655 899999999999999999985322111 000 0011
Q ss_pred cccCCC--CCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 449 EMLDPR--LPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 449 ~~~d~~--l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.+.... .+.. .....++..+++ .|++.+|++||++.|+++
T Consensus 233 ~~~~~~~~~~~~-~~~s~~~~~li~---~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 233 RILSVKYSIPDD-IRISPECCHLIS---RIFVADPATRISIPEIKT 274 (361)
T ss_dssp HHHTTCCCCCTT-SCCCHHHHHHHH---HHSCSCTTTSCCHHHHHT
T ss_pred HHhcCCCCCCCc-CCCCHHHHHHHH---HHccCChhHCcCHHHHHh
Confidence 111111 1111 112245666666 999999999999999875
No 342
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.09 E-value=6.2e-12 Score=119.64 Aligned_cols=110 Identities=23% Similarity=0.335 Sum_probs=73.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++....... .....||..|+|||...+. .+.++||||+|++++||+||+.|+...... .....
T Consensus 149 ~l~Dfg~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~ 218 (277)
T 3f3z_A 149 KLIDFGLAARFKPGKM-MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS--------EVMLK 218 (277)
T ss_dssp EECCCTTCEECCTTSC-BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHH
T ss_pred EEEecccceeccCccc-hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH--------HHHHH
Confidence 4689999987754332 2345789999999987654 899999999999999999999997531110 00011
Q ss_pred ccCCCCCCCC---cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPS---CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~---~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+.......+. ....+++..+++ .|++.+|++||++.|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~li~---~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 219 IREGTFTFPEKDWLNVSPQAESLIR---RLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHCCCCCCHHHHTTSCHHHHHHHH---HHTCSSTTTSCCHHHHTT
T ss_pred HHhCCCCCCchhhhcCCHHHHHHHH---HHccCChhhCcCHHHHhc
Confidence 1111110000 011245666666 999999999999999975
No 343
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.09 E-value=8.1e-09 Score=103.38 Aligned_cols=275 Identities=13% Similarity=0.116 Sum_probs=158.9
Q ss_pred cCcccCCCCC-CCCEEECCCCcccccCCccCcCCCCCCEEEccCCc---CcCCCCcccCCCCCCcEEEccCCcCcccCCc
Q 010736 86 LHAFSFSSFP-HLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQ---FSGNIPHEVGLMSHLKILYIDSNQLDGSIPL 161 (502)
Q Consensus 86 l~~~~~~~l~-~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~---l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 161 (502)
|...+|.+.. .|+.+.+..+ ++.+-..+|.++++|+.+.++.|. ++..-..+|.++.+|+.+.+..+ ++.....
T Consensus 54 Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~ 131 (394)
T 4gt6_A 54 IGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSE 131 (394)
T ss_dssp ECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTT
T ss_pred cCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhh
Confidence 4444566653 4777777543 555556667777777777776653 44333455666666666665543 3334444
Q ss_pred ccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccccccCcccccccCCCCC
Q 010736 162 EVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAINQFSGPIPLSLGNLTNL 241 (502)
Q Consensus 162 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 241 (502)
.|..+.+|+.+.+..+ +.......|..+..|+.+.+..+ ++..-..+|.. ..|+.+.+..+-.. .....|.++.++
T Consensus 132 aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l 207 (394)
T 4gt6_A 132 AFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFAL 207 (394)
T ss_dssp TTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTC
T ss_pred hhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhcccc
Confidence 5666666666666533 23234445566666666666543 22222223322 33444444322111 112223333333
Q ss_pred cEEEeeCc------------------------------------cccccCCCCCcc-ccccEEECcCCcCcccCCccccC
Q 010736 242 KQFSLVYN------------------------------------NLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICR 284 (502)
Q Consensus 242 ~~L~l~~N------------------------------------~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~ 284 (502)
.......+ .++......|.. ..|+.+.+..+. .......|..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~-~~I~~~aF~~ 286 (394)
T 4gt6_A 208 STITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSV-VSIGTGAFMN 286 (394)
T ss_dssp CEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTC-CEECTTTTTT
T ss_pred ceecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEeccccc-ceecCccccc
Confidence 32222111 111111122322 457777776543 3344566778
Q ss_pred CCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeee
Q 010736 285 GGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALN 364 (502)
Q Consensus 285 ~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~ 364 (502)
...|+.+.+. +.++..-...|.+|.+|+.+.+..+ ++.....+|..+.+|+.+.+..+ ++..-..+|.+|.+|+.++
T Consensus 287 c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~ 363 (394)
T 4gt6_A 287 CPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIE 363 (394)
T ss_dssp CTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEE
T ss_pred ccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEE
Confidence 8889998886 4455455667889999999999754 66666778889999999999654 6655567899999999999
Q ss_pred ecCCcc
Q 010736 365 ISRNNI 370 (502)
Q Consensus 365 l~~N~l 370 (502)
+.++..
T Consensus 364 ~~~~~~ 369 (394)
T 4gt6_A 364 YSGSRS 369 (394)
T ss_dssp ESSCHH
T ss_pred ECCcee
Confidence 988754
No 344
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.09 E-value=1.2e-11 Score=123.03 Aligned_cols=60 Identities=23% Similarity=0.307 Sum_probs=50.2
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~ 432 (502)
..+|||+++..... .+...||..|+|||...+..++.++|||||||+++||+||+.|++.
T Consensus 178 kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 237 (373)
T 1q8y_A 178 KIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237 (373)
T ss_dssp EECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred EEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 36899999877542 2345789999999999988899999999999999999999999863
No 345
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.09 E-value=1.2e-11 Score=121.67 Aligned_cols=118 Identities=19% Similarity=0.306 Sum_probs=74.6
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccc-eecc-cceeeeeceeeeehhcCCCCCCcccCCC-C------CC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTM-KITE-KCDVYSFGVLVLEVIKGKHPRDFLSSTS-S------PS 440 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~-~~s~-k~Dvysfgv~llElltg~~p~~~~~~~~-~------~~ 440 (502)
..+|||+++..... ......|+..|+|||..... ..+. ++||||||++++||+||+.|+....... . ..
T Consensus 192 kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~ 269 (348)
T 2pml_X 192 KLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKN 269 (348)
T ss_dssp EECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCC
T ss_pred EEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccC
Confidence 46899999876543 22346789999999999877 5666 9999999999999999999986322100 0 00
Q ss_pred CCcccccccccCCCCCC----CCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 441 LNTDIALDEMLDPRLPV----PSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 441 ~~~~~~~~~~~d~~l~~----~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
............+.... .......++..+++ .|++.+|++||++.|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 270 IEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLK---LFLRKNPAERITSEDALK 322 (348)
T ss_dssp CCCCCSSSSSTTTTCC--------CCCHHHHHHHH---HHCCSSGGGSCCHHHHHT
T ss_pred cCCccchhhhhccccccccccchhhcCHHHHHHHH---HHccCChhhCCCHHHHhc
Confidence 00000000000000000 00112345666666 999999999999999975
No 346
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.09 E-value=5.4e-12 Score=128.28 Aligned_cols=114 Identities=25% Similarity=0.408 Sum_probs=70.7
Q ss_pred cccccCcccccCCCCCC----cccccccccccCcccccc-------ceecccceeeeeceeeeehhc-CCCCCCcccCCC
Q 010736 370 ITGDFGIAKFLKPDSSN----WTGFAGTYGYIAPELAYT-------MKITEKCDVYSFGVLVLEVIK-GKHPRDFLSSTS 437 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~----~~~~~gt~gy~aPE~~~~-------~~~s~k~Dvysfgv~llEllt-g~~p~~~~~~~~ 437 (502)
..+|||+++.+...... .....||.+|+|||...+ ...+.++|||||||+++||+| |+.|++......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 47899999987653321 234579999999999865 678999999999999999999 999975321100
Q ss_pred CCCCCcccccccccC-CCCCC-CCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 438 SPSLNTDIALDEMLD-PRLPV-PSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 438 ~~~~~~~~~~~~~~d-~~l~~-~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
........+ +.... .......++..+++ .|++.+|++||++.||++
T Consensus 248 ------~~i~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 ------SNIIRGIFSLDEMKCLHDRSLIAEATDLIS---QMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp ------HHHHHTCCCCCCCTTCCCHHHHHHHHHHHH---HHTCSSGGGSCCHHHHHT
T ss_pred ------HHHhcCCCCcccccccccccchHHHHHHHH---HHhhCChhhCCCHHHHHh
Confidence 000001111 11110 01112244555555 999999999999999975
No 347
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.09 E-value=7.4e-12 Score=130.03 Aligned_cols=110 Identities=25% Similarity=0.375 Sum_probs=76.0
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++.+...........||..|+|||...+..++.++|+||+||+++||+||+.|+........ .......
T Consensus 329 kL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~----~~~~~~~ 404 (543)
T 3c4z_A 329 RISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE----NKELKQR 404 (543)
T ss_dssp EECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC----HHHHHHH
T ss_pred EEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh----HHHHHHH
Confidence 368999999876544444456899999999999988899999999999999999999999853211100 0000111
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTM 487 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m 487 (502)
+......-+ .....++..+++ .|++.+|++||++
T Consensus 405 i~~~~~~~p-~~~s~~~~~li~---~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 405 VLEQAVTYP-DKFSPASKDFCE---ALLQKDPEKRLGF 438 (543)
T ss_dssp HHHCCCCCC-TTSCHHHHHHHH---HHSCSSGGGSCCC
T ss_pred HhhcccCCC-cccCHHHHHHHH---HhccCCHhHCCCC
Confidence 111111111 122356667777 9999999999976
No 348
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.09 E-value=1.2e-11 Score=119.98 Aligned_cols=119 Identities=17% Similarity=0.309 Sum_probs=70.7
Q ss_pred cccccCcccccCCCCC-------CcccccccccccCcccccc-----ceecccceeeeeceeeeehhcCCCCCCcccCCC
Q 010736 370 ITGDFGIAKFLKPDSS-------NWTGFAGTYGYIAPELAYT-----MKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS 437 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~-------~~~~~~gt~gy~aPE~~~~-----~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~ 437 (502)
..+|||+++....... ......||..|+|||.... ...+.++||||+||+++||+||+.|+.......
T Consensus 154 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~ 233 (316)
T 2ac3_A 154 KICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233 (316)
T ss_dssp EECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSC
T ss_pred EEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccc
Confidence 3689999887642211 1123468999999999865 567899999999999999999999986432111
Q ss_pred CCCCCcc--------cccccccCCCCCCCC---cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 438 SPSLNTD--------IALDEMLDPRLPVPS---CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 438 ~~~~~~~--------~~~~~~~d~~l~~~~---~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
. .+... .....+.......+. .....++..+++ .|++.+|++||++.|+++
T Consensus 234 ~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 234 C-GWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLIS---KLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp S-CC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHH---HHSCSSTTTSCCHHHHHH
T ss_pred c-cccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHH---HHhhCChhhCCCHHHHhc
Confidence 0 01000 000111111111000 011245666666 999999999999999976
No 349
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.08 E-value=1.5e-11 Score=118.34 Aligned_cols=117 Identities=25% Similarity=0.414 Sum_probs=71.0
Q ss_pred cccccCcccccCCCCC-----CcccccccccccCcccccc-ceecccceeeeeceeeeehhcCCCCCCcccCCCCCC--C
Q 010736 370 ITGDFGIAKFLKPDSS-----NWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPS--L 441 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~-----~~~~~~gt~gy~aPE~~~~-~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~--~ 441 (502)
..+|||+++....... ......|+..|+|||.... ...+.++||||||++++||+||+.|++......... .
T Consensus 161 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 240 (303)
T 2vwi_A 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL 240 (303)
T ss_dssp EECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHH
T ss_pred EEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHh
Confidence 4689999987643211 1224568999999999875 467899999999999999999999986322110000 0
Q ss_pred Ccc--cccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 442 NTD--IALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 442 ~~~--~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
... .......++.... ...+++..+++ .|++.+|++||++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~---~~~~~~~~li~---~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 241 QNDPPSLETGVQDKEMLK---KYGKSFRKMIS---LCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TSSCCCTTC-----CCCC---CCCHHHHHHHH---HHCCSSGGGSCCHHHHHT
T ss_pred ccCCCccccccccchhhh---hhhHHHHHHHH---HHccCChhhCcCHHHHhh
Confidence 000 0000111122211 12245666666 999999999999999975
No 350
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.08 E-value=9.9e-12 Score=123.38 Aligned_cols=111 Identities=23% Similarity=0.389 Sum_probs=73.7
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccccc------ceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT------MKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNT 443 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~------~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~ 443 (502)
..+|||+++.+..... .....||.+|+|||+..+ ..++.++|||||||+++||+||+.|+......
T Consensus 240 kl~DfG~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~------- 311 (365)
T 2y7j_A 240 RLSDFGFSCHLEPGEK-LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI------- 311 (365)
T ss_dssp EECCCTTCEECCTTCC-BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-------
T ss_pred EEEecCcccccCCCcc-cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH-------
Confidence 4689999987764332 334679999999999763 25788999999999999999999997421100
Q ss_pred ccccccccCCCCCCCC---cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 444 DIALDEMLDPRLPVPS---CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 444 ~~~~~~~~d~~l~~~~---~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.....+......... .....++..+++ .|++.+|++||++.|+++
T Consensus 312 -~~~~~i~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 312 -LMLRMIMEGQYQFSSPEWDDRSSTVKDLIS---RLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp -HHHHHHHHTCCCCCHHHHSSSCHHHHHHHH---HHSCSSTTTSCCHHHHHH
T ss_pred -HHHHHHHhCCCCCCCcccccCCHHHHHHHH---HHcCCChhHCcCHHHHhc
Confidence 000001111100000 011234556666 999999999999999975
No 351
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.08 E-value=9.9e-12 Score=119.94 Aligned_cols=113 Identities=19% Similarity=0.282 Sum_probs=74.9
Q ss_pred ccccccCcccccCCCCC--CcccccccccccCccccccc--eecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcc
Q 010736 369 NITGDFGIAKFLKPDSS--NWTGFAGTYGYIAPELAYTM--KITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTD 444 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~~--~~~~~~gt~gy~aPE~~~~~--~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~ 444 (502)
-..+|||+++....... ......|+..|+|||..... ..+.++||||+|++++||+||+.|++..... .
T Consensus 148 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~---- 220 (305)
T 2wtk_C 148 LKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY---K---- 220 (305)
T ss_dssp EEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH---H----
T ss_pred EEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH---H----
Confidence 34689999987753221 22345689999999998754 3478999999999999999999997531100 0
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHH
Q 010736 445 IALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQ 493 (502)
Q Consensus 445 ~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~ 493 (502)
....+.......+ ....+++..+++ .|++.+|++||++.|+++.
T Consensus 221 -~~~~i~~~~~~~~-~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 221 -LFENIGKGSYAIP-GDCGPPLSDLLK---GMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -HHHHHHHCCCCCC-SSSCHHHHHHHH---HHTCSSTTTSCCHHHHHHS
T ss_pred -HHHHHhcCCCCCC-CccCHHHHHHHH---HHccCChhhCCCHHHHhcC
Confidence 0001111111101 112245666666 9999999999999999863
No 352
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.08 E-value=1.1e-11 Score=120.70 Aligned_cols=107 Identities=25% Similarity=0.374 Sum_probs=75.7
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++..... .....||..|+|||.......+.++|+||+||+++||+||+.|+..... ......
T Consensus 146 kL~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~ 214 (318)
T 1fot_A 146 KITDFGFAKYVPDV---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--------MKTYEK 214 (318)
T ss_dssp EECCCSSCEECSSC---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHH
T ss_pred EEeecCcceecCCc---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHH
Confidence 46899999876532 2346799999999999988899999999999999999999999742110 001111
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCC-----CHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP-----TMKIVS 491 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp-----~m~~v~ 491 (502)
+......-+ ....+++..+++ .|++.+|++|| ++.||.
T Consensus 215 i~~~~~~~p-~~~~~~~~~li~---~lL~~dp~~R~~~~~~~~~~i~ 257 (318)
T 1fot_A 215 ILNAELRFP-PFFNEDVKDLLS---RLITRDLSQRLGNLQNGTEDVK 257 (318)
T ss_dssp HHHCCCCCC-TTSCHHHHHHHH---HHTCSCTTTCTTSSTTTTHHHH
T ss_pred HHhCCCCCC-CCCCHHHHHHHH---HHhccCHHHcCCCcCCCHHHHh
Confidence 221111111 112356667777 99999999999 788875
No 353
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.08 E-value=2.3e-11 Score=122.05 Aligned_cols=119 Identities=24% Similarity=0.267 Sum_probs=74.8
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccc-eecccceeeeeceeeeehhcCCCCCCcccCCC----------C
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTM-KITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS----------S 438 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~-~~s~k~Dvysfgv~llElltg~~p~~~~~~~~----------~ 438 (502)
..+|||+++.+..... .....||..|+|||...+. .++.++||||+||+++||+||+.|+....... .
T Consensus 182 kL~DFG~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~ 260 (394)
T 4e7w_A 182 KLIDFGSAKILIAGEP-NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGT 260 (394)
T ss_dssp EECCCTTCEECCTTCC-CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred EEeeCCCcccccCCCC-CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 3799999998754332 2345689999999988654 58999999999999999999999985321100 0
Q ss_pred CC---CCc-ccccccccCCCCCCC------CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 439 PS---LNT-DIALDEMLDPRLPVP------SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 439 ~~---~~~-~~~~~~~~d~~l~~~------~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.. +.. .....+..-+..... ......++..+++ .|++.+|++||++.|+++
T Consensus 261 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 261 PSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLIS---RLLEYTPSARLTAIEALC 321 (394)
T ss_dssp CCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHH---HHCCSSGGGSCCHHHHHT
T ss_pred CCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHH---HHhCCChhhCCCHHHHhc
Confidence 00 000 000000000111000 0012245666666 999999999999999875
No 354
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.08 E-value=5.5e-12 Score=124.90 Aligned_cols=60 Identities=27% Similarity=0.340 Sum_probs=51.5
Q ss_pred ccccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCC
Q 010736 369 NITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
-..+|||+++...... ....||..|+|||...+..++.++||||+||+++||+||+.|+.
T Consensus 201 ~kl~DFG~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 260 (360)
T 3llt_A 201 IKLIDFGCATFKSDYH---GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260 (360)
T ss_dssp EEECCCTTCEETTSCC---CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEEEeccCceecCCCC---cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCC
Confidence 3479999998764322 34578999999999999999999999999999999999999985
No 355
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.08 E-value=1.3e-11 Score=119.24 Aligned_cols=112 Identities=21% Similarity=0.288 Sum_probs=75.3
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++..... ......|+..|+|||.......+.++||||+|++++||+||+.|+...... ..........
T Consensus 149 kl~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~ 223 (304)
T 2jam_A 149 MITDFGLSKMEQNG--IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES---KLFEKIKEGY 223 (304)
T ss_dssp EBCSCSTTCCCCCB--TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHHHHHCC
T ss_pred EEccCCcceecCCC--ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHHHHHHcCC
Confidence 46899998765432 223456899999999999888999999999999999999999997521110 0000000000
Q ss_pred -ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 -MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 -~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
....... ....+++..+++ .|++.+|++||++.|+++
T Consensus 224 ~~~~~~~~---~~~~~~~~~li~---~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 224 YEFESPFW---DDISESAKDFIC---HLLEKDPNERYTCEKALS 261 (304)
T ss_dssp CCCCTTTT---TTSCHHHHHHHH---HHHCSSTTTSCCHHHHHT
T ss_pred CCCCcccc---ccCCHHHHHHHH---HHcCCChhHCcCHHHHhc
Confidence 0011111 112355666666 999999999999999975
No 356
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.08 E-value=6e-12 Score=122.94 Aligned_cols=113 Identities=22% Similarity=0.309 Sum_probs=73.0
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++....... .....||.+|+|||.......+.++||||+|++++||+||+.|+....... ... .+..
T Consensus 174 kL~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~--~i~~ 247 (327)
T 3lm5_A 174 KIVDFGMSRKIGHACE-LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE---TYL--NISQ 247 (327)
T ss_dssp EECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH--HHHH
T ss_pred EEeeCccccccCCccc-cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH---HHH--HHHh
Confidence 4689999987754322 234679999999999998899999999999999999999999975311100 000 0000
Q ss_pred -ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 -MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 -~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
..+.... ......+++..+++ .|++.+|++||++.|+++
T Consensus 248 ~~~~~~~~-~~~~~~~~~~~li~---~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 248 VNVDYSEE-TFSSVSQLATDFIQ---SLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp TCCCCCTT-TTTTSCHHHHHHHH---HHSCSSGGGSCCHHHHTT
T ss_pred cccccCch-hhcccCHHHHHHHH---HHcCCChhhCcCHHHHhC
Confidence 0010000 00112345666666 999999999999999865
No 357
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.08 E-value=3.4e-11 Score=123.37 Aligned_cols=60 Identities=32% Similarity=0.407 Sum_probs=43.4
Q ss_pred cccccCcccccCCCC---------------------------CCcccccccccccCcccc-ccceecccceeeeeceeee
Q 010736 370 ITGDFGIAKFLKPDS---------------------------SNWTGFAGTYGYIAPELA-YTMKITEKCDVYSFGVLVL 421 (502)
Q Consensus 370 l~~dfGl~~ll~~~~---------------------------~~~~~~~gt~gy~aPE~~-~~~~~s~k~Dvysfgv~ll 421 (502)
.++|||+++...... ...+...||..|+|||.. ....++.++|||||||+++
T Consensus 196 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ 275 (458)
T 3rp9_A 196 KVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFA 275 (458)
T ss_dssp EECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred eecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHH
Confidence 379999999874221 112345789999999975 5567899999999999999
Q ss_pred ehhcCCCC
Q 010736 422 EVIKGKHP 429 (502)
Q Consensus 422 Elltg~~p 429 (502)
||+||..|
T Consensus 276 elltg~~~ 283 (458)
T 3rp9_A 276 ELLNMIKE 283 (458)
T ss_dssp HHHTTSTT
T ss_pred HHHHhccc
Confidence 99996443
No 358
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.07 E-value=2.7e-11 Score=121.42 Aligned_cols=60 Identities=18% Similarity=0.204 Sum_probs=51.5
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDF 432 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~ 432 (502)
..+|||+++..... .+...||..|+|||...+..++.++|||||||+++||+||+.|++.
T Consensus 236 kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 295 (397)
T 1wak_A 236 KIADLGNACWVHKH---FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEP 295 (397)
T ss_dssp EECCGGGCEETTBC---SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred Eecccccccccccc---CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCC
Confidence 46899999877532 2345789999999999988899999999999999999999999863
No 359
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.07 E-value=6.9e-12 Score=126.38 Aligned_cols=62 Identities=21% Similarity=0.370 Sum_probs=44.5
Q ss_pred cccccCcccccCCCC---CCcccccccccccCccccccc-eecccceeeeeceeeeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDS---SNWTGFAGTYGYIAPELAYTM-KITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~---~~~~~~~gt~gy~aPE~~~~~-~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
.++|||+++...... .......||..|+|||...+. .++.++|||||||+++||+||+.|+.
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 237 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 237 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCC
Confidence 468999998875321 122346789999999998764 48999999999999999999999985
No 360
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.07 E-value=2.7e-11 Score=120.20 Aligned_cols=114 Identities=12% Similarity=0.089 Sum_probs=79.4
Q ss_pred CccccccCcccccCC--CCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccc
Q 010736 368 NNITGDFGIAKFLKP--DSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDI 445 (502)
Q Consensus 368 N~l~~dfGl~~ll~~--~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~ 445 (502)
.-.++|||+++.+.. .....+...||.+|+|||...+..++.++|||||||+++||+||+.|+...... ..
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-------~~ 293 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG-------EC 293 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT-------EE
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC-------ce
Confidence 345789999986642 222334567999999999999988999999999999999999999997422110 00
Q ss_pred ccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCC-CCHHHHHHHHHhh
Q 010736 446 ALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESR-PTMKIVSQQLRIS 497 (502)
Q Consensus 446 ~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~R-p~m~~v~~~l~~~ 497 (502)
. .+..+... ...+.+.++++ .|++.+|.+| |+++++.+.|+..
T Consensus 294 ~----~~~~~~~~--~~~~~~~~~~~---~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 294 K----PEGLFRRL--PHLDMWNEFFH---VMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp E----ECSCCTTC--SSHHHHHHHHH---HHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred e----echhcccc--CcHHHHHHHHH---HHcCCCCCCcchHHHHHHHHHHHH
Confidence 1 11111111 12455666777 7778888888 6788888877764
No 361
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.07 E-value=1e-11 Score=122.50 Aligned_cols=108 Identities=20% Similarity=0.294 Sum_probs=75.8
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++...... ....||..|+|||......++.++|+||+||+++||+||+.|+..... ......
T Consensus 181 kL~DFg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~ 249 (350)
T 1rdq_E 181 QVTDFGFAKRVKGRT---WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--------IQIYEK 249 (350)
T ss_dssp EECCCTTCEECSSCB---CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHH
T ss_pred EEcccccceeccCCc---ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--------HHHHHH
Confidence 368999998775432 346799999999999988899999999999999999999999752110 000111
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCC-----HHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT-----MKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~-----m~~v~~ 492 (502)
+......-+ .....++..+++ .|++.+|++||+ +.||.+
T Consensus 250 i~~~~~~~p-~~~~~~~~~li~---~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 250 IVSGKVRFP-SHFSSDLKDLLR---NLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHCCCCCC-TTCCHHHHHHHH---HHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHcCCCCCC-CCCCHHHHHHHH---HHhhcCHHhccCCccCCHHHHHh
Confidence 111111111 112356667777 999999999998 777753
No 362
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.07 E-value=1.6e-11 Score=117.10 Aligned_cols=105 Identities=15% Similarity=0.256 Sum_probs=72.1
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccc-eecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTM-KITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALD 448 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~-~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~ 448 (502)
..+|||+++...... ...||..|+|||..... ..+.++||||||++++|+++|+.|...... + . .+.
T Consensus 174 kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-----~-~--~~~ 241 (289)
T 1x8b_A 174 KIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ-----W-H--EIR 241 (289)
T ss_dssp EECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH-----H-H--HHH
T ss_pred EEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH-----H-H--HHH
Confidence 468999998775432 24589999999998765 567899999999999999999987431100 0 0 000
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 449 EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 449 ~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.-..+.++ ....+++.++++ .|++.+|++||++.|+++
T Consensus 242 ~~~~~~~~---~~~~~~~~~li~---~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 242 QGRLPRIP---QVLSQEFTELLK---VMIHPDPERRPSAMALVK 279 (289)
T ss_dssp TTCCCCCS---SCCCHHHHHHHH---HHTCSSGGGSCCHHHHHT
T ss_pred cCCCCCCC---cccCHHHHHHHH---HHhCCCcccCCCHHHHhh
Confidence 11111221 112355666666 999999999999999975
No 363
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.06 E-value=3.7e-08 Score=98.57 Aligned_cols=285 Identities=11% Similarity=0.095 Sum_probs=178.1
Q ss_pred EEEEEecCCCCceecCcccCCCCCCCCEEECCCCc---ccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEE
Q 010736 72 VINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNK---LFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKIL 148 (502)
Q Consensus 72 v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~---l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 148 (502)
++.+.++.. ++ .|...+|.++++|+.+.+..|. ++.+-..+|.++.+|+.+.+..+ ++......|..+.+|+.+
T Consensus 66 L~sI~iP~s-vt-~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i 142 (394)
T 4gt6_A 66 LTSVQIPDT-VT-EIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTV 142 (394)
T ss_dssp CCEEEECTT-CC-EECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEE
T ss_pred CEEEEECCC-ee-EEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccc
Confidence 566666543 33 4566678888999999887653 66555677888888888887655 443455678888889988
Q ss_pred EccCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEcccccccccCCccCcCCccCCccccccc---
Q 010736 149 YIDSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSISILSLAIN--- 225 (502)
Q Consensus 149 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N--- 225 (502)
.+..+ +.......|..+.+|+.+.+..+ ++..-..+|. ..+|+.+.+..+-. ..-...|..+.++.......+
T Consensus 143 ~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~-~i~~~af~~c~~l~~~~~~~~~~~ 218 (394)
T 4gt6_A 143 TIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVT-RIGTNAFSECFALSTITSDSESYP 218 (394)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCC-EECTTTTTTCTTCCEEEECCSSSC
T ss_pred cccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCccc-ccccchhhhccccceecccccccc
Confidence 88754 34355567888888888888655 4434444554 36788887765432 233344555544443322211
Q ss_pred ---------------------------------cccCcccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcC
Q 010736 226 ---------------------------------QFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDD 271 (502)
Q Consensus 226 ---------------------------------~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~ 271 (502)
.++..-...|.++..|+.+.+..+... .....+.. ..|+.+.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~- 296 (394)
T 4gt6_A 219 AIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS- 296 (394)
T ss_dssp BSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-
T ss_pred cccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-
Confidence 111112245677788888887655432 22333333 568888875
Q ss_pred CcCcccCCccccCCCCCcEEEccCCccccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccC
Q 010736 272 NHFTSYLPQNICRGGALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEIS 351 (502)
Q Consensus 272 N~l~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 351 (502)
+.++.+....|..+.+|+.+.+..+ ++..-...|.+|.+|+.+.+..+ ++..-..+|..+.+|+.+++.++....
T Consensus 297 ~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~--- 371 (394)
T 4gt6_A 297 SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW--- 371 (394)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---
T ss_pred CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---
Confidence 4566656667778888988888754 55455667888889998888644 665556788888899999888875432
Q ss_pred ccccCCCCCCeeeecCCcc
Q 010736 352 SNFGECPKLGALNISRNNI 370 (502)
Q Consensus 352 ~~~~~~~~L~~L~l~~N~l 370 (502)
..+..+.+|+.+.+..|.+
T Consensus 372 ~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 372 NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp HTCBCCCCC----------
T ss_pred hhhhccCCCCEEEeCCCCE
Confidence 3566677788877766543
No 364
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.06 E-value=1.1e-11 Score=121.03 Aligned_cols=61 Identities=23% Similarity=0.340 Sum_probs=50.4
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccccc-ceecccceeeeeceeeeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~-~~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
..+|||+++....... .....|+..|+|||.... ...+.++||||+||+++||+||+.|+.
T Consensus 171 kl~Dfg~a~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~ 232 (330)
T 3nsz_A 171 RLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 232 (330)
T ss_dssp EECCCTTCEECCTTCC-CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred EEEeCCCceEcCCCCc-cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 3789999988754332 234568899999999876 568999999999999999999999973
No 365
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.06 E-value=3.7e-11 Score=122.02 Aligned_cols=62 Identities=26% Similarity=0.370 Sum_probs=45.8
Q ss_pred cccccCcccccCCCCC----------------------CcccccccccccCcccc-ccceecccceeeeeceeeeehhcC
Q 010736 370 ITGDFGIAKFLKPDSS----------------------NWTGFAGTYGYIAPELA-YTMKITEKCDVYSFGVLVLEVIKG 426 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~----------------------~~~~~~gt~gy~aPE~~-~~~~~s~k~Dvysfgv~llElltg 426 (502)
.++|||+++....... ..+...||..|+|||.. ....++.++||||+||+++||+||
T Consensus 169 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g 248 (432)
T 3n9x_A 169 KVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNM 248 (432)
T ss_dssp EECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTT
T ss_pred EEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhc
Confidence 3789999998753221 12456789999999985 556689999999999999999998
Q ss_pred CCCCC
Q 010736 427 KHPRD 431 (502)
Q Consensus 427 ~~p~~ 431 (502)
+.|+.
T Consensus 249 ~~p~~ 253 (432)
T 3n9x_A 249 LQSHI 253 (432)
T ss_dssp CTTTC
T ss_pred ccccc
Confidence 77653
No 366
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.06 E-value=6.6e-12 Score=125.76 Aligned_cols=62 Identities=27% Similarity=0.385 Sum_probs=48.2
Q ss_pred cccccCcccccCCC---------------------CCCcccccccccccCcccccc-ceecccceeeeeceeeeehhcCC
Q 010736 370 ITGDFGIAKFLKPD---------------------SSNWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGK 427 (502)
Q Consensus 370 l~~dfGl~~ll~~~---------------------~~~~~~~~gt~gy~aPE~~~~-~~~s~k~Dvysfgv~llElltg~ 427 (502)
..+|||+++.+... ....+...||..|+|||...+ ..++.++||||+||+++||+||+
T Consensus 149 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~ 228 (388)
T 3oz6_A 149 KVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228 (388)
T ss_dssp EECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCC
Confidence 37899999876321 111234579999999999876 57899999999999999999999
Q ss_pred CCCC
Q 010736 428 HPRD 431 (502)
Q Consensus 428 ~p~~ 431 (502)
.|+.
T Consensus 229 ~pf~ 232 (388)
T 3oz6_A 229 PIFP 232 (388)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 9985
No 367
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.06 E-value=5e-11 Score=117.55 Aligned_cols=62 Identities=21% Similarity=0.275 Sum_probs=49.8
Q ss_pred cccccCcccccCCCC----CCcccccccccccCcccccc-ceecccceeeeeceeeeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDS----SNWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~----~~~~~~~gt~gy~aPE~~~~-~~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
..+|||+++.+.... .......||.+|+|||...+ ..++.++|||||||+++||+||+.|++
T Consensus 164 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 230 (351)
T 3mi9_A 164 KLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 230 (351)
T ss_dssp EECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCC
Confidence 478999998775321 22234678999999998865 457899999999999999999999975
No 368
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.06 E-value=7.4e-12 Score=123.98 Aligned_cols=60 Identities=27% Similarity=0.460 Sum_probs=48.5
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
..+|||+++...... .....||..|+|||...+..++.++||||||++++||+||+.|+.
T Consensus 172 kl~Dfg~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 231 (360)
T 3eqc_A 172 KLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 231 (360)
T ss_dssp EECCCCCCHHHHHHC------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSS
T ss_pred EEEECCCCccccccc--ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 368999987653221 223578999999999999899999999999999999999999975
No 369
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.05 E-value=3.3e-11 Score=120.39 Aligned_cols=119 Identities=25% Similarity=0.271 Sum_probs=74.4
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccc-eecccceeeeeceeeeehhcCCCCCCcccCCC----------C
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTM-KITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS----------S 438 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~-~~s~k~Dvysfgv~llElltg~~p~~~~~~~~----------~ 438 (502)
..+|||+++.+..... .....||..|+|||...+. ..+.++||||+||+++||+||+.|+....... .
T Consensus 182 kl~Dfg~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~ 260 (383)
T 3eb0_A 182 KLCDFGSAKKLIPSEP-SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGT 260 (383)
T ss_dssp EECCCTTCEECCTTSC-CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred EEEECCCCcccCCCCC-CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 4789999997754332 2345688999999988764 48999999999999999999999985321100 0
Q ss_pred CC---CCc-ccccccccCCCCCCC------CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 439 PS---LNT-DIALDEMLDPRLPVP------SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 439 ~~---~~~-~~~~~~~~d~~l~~~------~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.. +.. .....+..-|.+... .....+++..+++ .|++.+|++||++.|+++
T Consensus 261 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 261 PTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLE---QILRYEPDLRINPYEAMA 321 (383)
T ss_dssp CCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHH---HHCCSSGGGSCCHHHHHT
T ss_pred CCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHH---HHccCChhhCCCHHHHhc
Confidence 00 000 000000111111000 0012245666666 999999999999999863
No 370
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.05 E-value=2e-11 Score=118.19 Aligned_cols=103 Identities=26% Similarity=0.489 Sum_probs=73.3
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccccccee-cccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKI-TEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALD 448 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~-s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~ 448 (502)
..+|||+++...... .....|+..|+|||....... +.++||||+|++++||+||+.|++....
T Consensus 180 kl~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------------- 244 (312)
T 2iwi_A 180 KLIDFGSGALLHDEP--YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------------- 244 (312)
T ss_dssp EECCCSSCEECCSSC--BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------------
T ss_pred EEEEcchhhhcccCc--ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-------------
Confidence 468999998775432 234678999999999876665 4589999999999999999999752110
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 449 EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 449 ~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+.+.....+ .....++..+++ .|++.+|++||++.||++
T Consensus 245 -~~~~~~~~~-~~~~~~~~~li~---~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 245 -ILEAELHFP-AHVSPDCCALIR---RCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -HHHTCCCCC-TTSCHHHHHHHH---HHTCSSTTTSCCHHHHHH
T ss_pred -HhhhccCCc-ccCCHHHHHHHH---HHccCChhhCcCHHHHhc
Confidence 001111000 112245566666 999999999999999976
No 371
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.05 E-value=1.9e-11 Score=121.28 Aligned_cols=62 Identities=27% Similarity=0.446 Sum_probs=49.5
Q ss_pred cccccCcccccCCCCC---CcccccccccccCcccccc-ceecccceeeeeceeeeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSS---NWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~---~~~~~~gt~gy~aPE~~~~-~~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
..+|||+++....... ..+...||..|+|||.... ...+.++||||+||+++||+||+.|+.
T Consensus 168 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 233 (364)
T 3qyz_A 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233 (364)
T ss_dssp EECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCC
Confidence 4689999987754221 1234579999999998654 448899999999999999999999985
No 372
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.04 E-value=3.7e-12 Score=122.74 Aligned_cols=114 Identities=21% Similarity=0.353 Sum_probs=69.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccc-----cceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAY-----TMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTD 444 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~-----~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~ 444 (502)
..+|||+++.............|+..|+|||... ....+.++||||||++++||+||+.|+....... ...
T Consensus 157 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~- 232 (302)
T 2j7t_A 157 RLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR---VLL- 232 (302)
T ss_dssp EECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHH-
T ss_pred EEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH---HHH-
Confidence 4689998754321111112356899999999973 5667889999999999999999999975321100 000
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 445 IALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 445 ~~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.......+....+ .....++..+++ .|++.+|++||++.|+++
T Consensus 233 -~~~~~~~~~~~~~-~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 233 -KIAKSDPPTLLTP-SKWSVEFRDFLK---IALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -HHHHSCCCCCSSG-GGSCHHHHHHHH---HHSCSCTTTSCCHHHHTT
T ss_pred -HHhccCCcccCCc-cccCHHHHHHHH---HHcccChhhCCCHHHHhc
Confidence 0000011111101 112245666666 999999999999999864
No 373
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.04 E-value=1.4e-11 Score=128.49 Aligned_cols=112 Identities=21% Similarity=0.311 Sum_probs=77.1
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
.++|||+++.+..... .....||..|+|||......++.++||||+||+++||+||+.|+........ .......
T Consensus 326 KL~DFGla~~~~~~~~-~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~----~~~i~~~ 400 (576)
T 2acx_A 326 RISDLGLAVHVPEGQT-IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK----REEVERL 400 (576)
T ss_dssp EECCCTTCEECCTTCC-EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC----HHHHHHH
T ss_pred EEEecccceecccCcc-ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh----HHHHHHH
Confidence 3789999988754332 3346799999999999998999999999999999999999999863221100 0000000
Q ss_pred c--cCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCC-----CHHHHHH
Q 010736 450 M--LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRP-----TMKIVSQ 492 (502)
Q Consensus 450 ~--~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp-----~m~~v~~ 492 (502)
+ .....+ .....++..+++ .|++.+|++|| +++||.+
T Consensus 401 i~~~~~~~p---~~~s~~~~dLI~---~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 401 VKEVPEEYS---ERFSPQARSLCS---QLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HHHCCCCCC---TTSCHHHHHHHH---HHTCSSGGGSTTCSSSHHHHHHT
T ss_pred hhcccccCC---ccCCHHHHHHHH---HhccCCHHHcCCCCCCCHHHHHh
Confidence 1 111121 112355667777 99999999999 6777753
No 374
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.03 E-value=2.3e-11 Score=123.32 Aligned_cols=114 Identities=21% Similarity=0.269 Sum_probs=72.9
Q ss_pred cccccCcccccCCCCC-CcccccccccccCccccc-----cceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCc
Q 010736 370 ITGDFGIAKFLKPDSS-NWTGFAGTYGYIAPELAY-----TMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNT 443 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~-~~~~~~gt~gy~aPE~~~-----~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~ 443 (502)
.++|||+++....... ..+...||.+|+|||+.. ...++.++|||||||+++||+||+.|+...... ....
T Consensus 215 kL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~---~~~~ 291 (437)
T 4aw2_A 215 RLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV---ETYG 291 (437)
T ss_dssp EECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHH
T ss_pred EEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh---HHHH
Confidence 4799999987654332 223467999999999986 567899999999999999999999998521100 0000
Q ss_pred ccc--cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCC--CCCHHHHHH
Q 010736 444 DIA--LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPES--RPTMKIVSQ 492 (502)
Q Consensus 444 ~~~--~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~--Rp~m~~v~~ 492 (502)
... .....-|... ....+++..+++ .|+..+|++ ||++.|+.+
T Consensus 292 ~i~~~~~~~~~p~~~---~~~s~~~~dLi~---~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 292 KIMNHKERFQFPTQV---TDVSENAKDLIR---RLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHHTHHHHCCCCSSC---CCSCHHHHHHHH---TTSSCGGGCTTTTTTHHHHT
T ss_pred hhhhccccccCCccc---ccCCHHHHHHHH---HHhcccccccCCCCHHHHhC
Confidence 000 0011111111 112356677777 555555666 999999864
No 375
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.03 E-value=2.7e-11 Score=118.49 Aligned_cols=60 Identities=27% Similarity=0.419 Sum_probs=51.2
Q ss_pred ccccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCC
Q 010736 369 NITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 369 ~l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
-..+|||+++...... ....||.+|+|||...+...+.++||||+|++++||+||+.|+.
T Consensus 176 ~kl~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 235 (339)
T 1z57_A 176 IKVVDFGSATYDDEHH---STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFP 235 (339)
T ss_dssp EEECCCSSCEETTSCC---CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ceEeeCcccccCcccc---ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 3478999998764322 34578999999999998889999999999999999999999985
No 376
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.03 E-value=1.8e-11 Score=122.64 Aligned_cols=62 Identities=16% Similarity=0.174 Sum_probs=47.9
Q ss_pred ccccCcccccCCC-------CCCcccccccccccCcccccc--ceecccceeeeeceeeeehhcCCCCCCc
Q 010736 371 TGDFGIAKFLKPD-------SSNWTGFAGTYGYIAPELAYT--MKITEKCDVYSFGVLVLEVIKGKHPRDF 432 (502)
Q Consensus 371 ~~dfGl~~ll~~~-------~~~~~~~~gt~gy~aPE~~~~--~~~s~k~Dvysfgv~llElltg~~p~~~ 432 (502)
.+|||.+...... ........||..|+|||.... ..++.++||||+||+++||+||+.|+..
T Consensus 169 l~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 239 (389)
T 3gni_B 169 LSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 239 (389)
T ss_dssp ECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred EcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 6799987654211 111123468899999999877 5789999999999999999999999853
No 377
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.02 E-value=3.4e-11 Score=119.80 Aligned_cols=59 Identities=31% Similarity=0.524 Sum_probs=45.7
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccccc-ceecccceeeeeceeeeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~-~~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
..+|||+++..... .+...||..|+|||...+ ...+.++||||+||+++||+||+.|++
T Consensus 184 kL~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 243 (371)
T 4exu_A 184 KILDFGLARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK 243 (371)
T ss_dssp EECSTTCC-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEEecCcccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCC
Confidence 36899999876432 234578999999999876 678999999999999999999999985
No 378
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.02 E-value=4.1e-11 Score=123.72 Aligned_cols=113 Identities=23% Similarity=0.311 Sum_probs=73.7
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++....... .....||..|+|||...+ .++.++||||+||+++||+||+.|+...... ....... ..
T Consensus 164 kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~i~-~~ 237 (486)
T 3mwu_A 164 KIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY---DILKRVE-TG 237 (486)
T ss_dssp EECSCSCTTTBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH-HT
T ss_pred EEEECCcCeECCCCCc-cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHH-hC
Confidence 3689999987754322 234579999999999875 5889999999999999999999997421100 0000000 00
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
......+.. ....+++..+++ .|++.+|++||++.|+++
T Consensus 238 ~~~~~~~~~-~~~s~~~~~li~---~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 238 KYAFDLPQW-RTISDDAKDLIR---KMLTFHPSLRITATQCLE 276 (486)
T ss_dssp CCCSCSGGG-GGSCHHHHHHHH---HHTCSSTTTSCCHHHHHH
T ss_pred CCCCCCccc-CCCCHHHHHHHH---HHcCCChhhCcCHHHHhc
Confidence 001111100 112345666776 999999999999999976
No 379
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.02 E-value=3e-11 Score=119.07 Aligned_cols=59 Identities=29% Similarity=0.482 Sum_probs=50.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
..+|||+++...... ....||..|+|||...+..++.++||||+||+++||+||+.|+.
T Consensus 182 kl~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 240 (355)
T 2eu9_A 182 RVADFGSATFDHEHH---TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 240 (355)
T ss_dssp EECCCTTCEETTSCC---CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEeecCccccccccc---cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence 468999998754322 34678999999999998899999999999999999999999985
No 380
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.01 E-value=2.9e-11 Score=115.23 Aligned_cols=111 Identities=20% Similarity=0.277 Sum_probs=72.7
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++....... .....|+..|+|||.......+.++||||||++++||+||+.|+...... .....
T Consensus 152 kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~ 222 (283)
T 3bhy_A 152 KLIDFGIAHKIEAGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--------ETLTN 222 (283)
T ss_dssp EECCCTTCEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHH
T ss_pred EEEecccceeccCCCc-ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--------HHHHH
Confidence 4689999987654322 23456899999999998888999999999999999999999997532110 00000
Q ss_pred cc--CCCCCCC-CcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 ML--DPRLPVP-SCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~--d~~l~~~-~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+. ....... .....+++.++++ .|++.+|++||++.|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~li~---~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 223 ISAVNYDFDEEYFSNTSELAKDFIR---RLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHTTCCCCCHHHHTTCCHHHHHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred hHhcccCCcchhcccCCHHHHHHHH---HHccCCHhHCcCHHHHHh
Confidence 00 0000000 0011245566666 999999999999999986
No 381
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.01 E-value=5.2e-13 Score=125.09 Aligned_cols=139 Identities=17% Similarity=0.161 Sum_probs=64.3
Q ss_pred CCCccceeeeCCCC-CEEEEEecC---CCCceecCcccCCCCC---------CCCEEECCCCcccccCCccCcCCCCCCE
Q 010736 57 SPCAWSGISCNDAG-RVINISLRG---VGLKGKLHAFSFSSFP---------HLAYLDLRDNKLFGTIPPQISNLTNLSI 123 (502)
Q Consensus 57 ~~C~W~Gv~C~~~~-~v~~L~L~~---~~l~g~l~~~~~~~l~---------~L~~L~Ls~N~l~g~~p~~l~~l~~L~~ 123 (502)
..|.|.|+.|+..+ +|+.+...+ ..+.|.+.+..+..++ .-+.|||+. |...+.|+.
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~----------l~~dp~L~~ 145 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKG----------LRSDPDLVA 145 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTT----------GGGCHHHHH
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHH----------cCCCcchhh
Confidence 46899999998643 665555544 3344444433222211 123334332 222223332
Q ss_pred --EEccCCcCc---CCCCcccCCCCCCcEEEccCCcCcc--cCCcccCCCCCCcEEEcccCcccccCCcCCCCCC--CCC
Q 010736 124 --LSLGGNQFS---GNIPHEVGLMSHLKILYIDSNQLDG--SIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLT--QIS 194 (502)
Q Consensus 124 --L~Ls~N~l~---~~~p~~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~ 194 (502)
++++.|... +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|++++. ..+..+. +|+
T Consensus 146 ~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~ 223 (267)
T 3rw6_A 146 QNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLE 223 (267)
T ss_dssp TTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCS
T ss_pred cCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcc
Confidence 344444221 1111111334555555555555554 2333444555555555555555533 1122222 555
Q ss_pred eEEcccccccccC
Q 010736 195 MLFLHDNSFSGFI 207 (502)
Q Consensus 195 ~L~L~~N~l~~~~ 207 (502)
+|+|++|.+.+.+
T Consensus 224 ~L~L~~Npl~~~~ 236 (267)
T 3rw6_A 224 ELWLDGNSLCDTF 236 (267)
T ss_dssp EEECTTSTTGGGC
T ss_pred eEEccCCcCcccc
Confidence 6666666555433
No 382
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.01 E-value=2.6e-11 Score=119.65 Aligned_cols=62 Identities=26% Similarity=0.418 Sum_probs=47.9
Q ss_pred cccccCcccccCCCCC----------CcccccccccccCccccc-cceecccceeeeeceeeeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSS----------NWTGFAGTYGYIAPELAY-TMKITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~----------~~~~~~gt~gy~aPE~~~-~~~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
..+|||+++....... ......||..|+|||... ....+.++|||||||+++||+||+.|+.
T Consensus 152 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 224 (353)
T 2b9h_A 152 KVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP 224 (353)
T ss_dssp EECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCC
Confidence 4689999987753211 122356899999999765 4678999999999999999999999985
No 383
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.01 E-value=2e-11 Score=120.51 Aligned_cols=117 Identities=20% Similarity=0.263 Sum_probs=71.2
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccccc-ceecccceeeeeceeeeehhcCCCCCCcccCCC-----------
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS----------- 437 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~-~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~----------- 437 (502)
..+|||+++..... .+...||..|+|||...+ ...+.++||||+||+++||+||+.|+.......
T Consensus 166 kl~Dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~ 242 (353)
T 3coi_A 166 KILDFGLARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV 242 (353)
T ss_dssp EECSTTCTTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCB
T ss_pred EEeecccccCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 36899999876432 234578999999998876 678899999999999999999999985321000
Q ss_pred -CCCCC---ccc----ccccc---cCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 438 -SPSLN---TDI----ALDEM---LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 438 -~~~~~---~~~----~~~~~---~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
...+. .+. ....+ ..+...........++..+++ .|++.+|++||+++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 243 PGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLE---KMLELDVDKRLTAAQALT 305 (353)
T ss_dssp CCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHH---HHSCSCTTTSCCHHHHHT
T ss_pred CCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHH---HHcCCCcccCCCHHHHhc
Confidence 00000 000 00000 000111000112345666666 999999999999999964
No 384
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.01 E-value=1.5e-11 Score=122.17 Aligned_cols=117 Identities=23% Similarity=0.302 Sum_probs=74.8
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccccc-ceecccceeeeeceeeeehhcCCCCCCcccCCC-----------
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTS----------- 437 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~-~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~----------- 437 (502)
.++|||+++..... .+...||..|+|||...+ ..++.++||||+||+++||+||+.|+.......
T Consensus 168 kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~ 244 (367)
T 1cm8_A 168 KILDFGLARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGT 244 (367)
T ss_dssp EECCCTTCEECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred EEEeeecccccccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 47999999876432 334678999999999876 678999999999999999999999975211000
Q ss_pred -CCCCCccc----------ccccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 438 -SPSLNTDI----------ALDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 438 -~~~~~~~~----------~~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
...+.... ...+...............++..+++ .|++.+|++||++.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~---~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 245 PPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLE---KMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp CCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHH---HHSCSSTTTSCCHHHHHH
T ss_pred CCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHH---HHccCChhHCCCHHHHhc
Confidence 00000000 00000000000000112245666666 999999999999999876
No 385
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.00 E-value=9.9e-12 Score=121.07 Aligned_cols=114 Identities=26% Similarity=0.366 Sum_probs=73.2
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccc---cceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAY---TMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIA 446 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~---~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~ 446 (502)
..+|||+++...... ......||..|+|||... ...++.++|||||||+++||+||+.|+....... .......
T Consensus 157 kl~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~ 233 (322)
T 2ycf_A 157 KITDFGHSKILGETS-LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQIT 233 (322)
T ss_dssp EECCCTTCEECCCCH-HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHHH
T ss_pred EEccCccceeccccc-ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHHH
Confidence 368999998775321 123456899999999864 4567899999999999999999999985322110 0000000
Q ss_pred cccc-cCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 447 LDEM-LDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 447 ~~~~-~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.... ..+... ....+++.++++ .|++.+|++||++.|+++
T Consensus 234 ~~~~~~~~~~~---~~~~~~~~~li~---~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 234 SGKYNFIPEVW---AEVSEKALDLVK---KLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HTCCCCCHHHH---TTSCHHHHHHHH---HHSCSSTTTSCCHHHHHT
T ss_pred hCccccCchhh---hhcCHHHHHHHH---HHcccCHhhCCCHHHHhh
Confidence 0000 000000 011245556666 999999999999999874
No 386
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.00 E-value=3.3e-11 Score=121.34 Aligned_cols=113 Identities=24% Similarity=0.305 Sum_probs=73.0
Q ss_pred cccccCcccccCCCCCC-cccccccccccCccccc-------cceecccceeeeeceeeeehhcCCCCCCcccCCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSN-WTGFAGTYGYIAPELAY-------TMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSL 441 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~-~~~~~gt~gy~aPE~~~-------~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~ 441 (502)
..+|||+++.+...... .....||..|+|||... ...++.++|+|||||+++||+||+.|+...... ..
T Consensus 202 kL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~---~~ 278 (412)
T 2vd5_A 202 RLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA---ET 278 (412)
T ss_dssp EECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH---HH
T ss_pred EEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH---HH
Confidence 47899999887554332 23467999999999987 357899999999999999999999998531110 00
Q ss_pred Cccccc--ccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCC---CCHHHHHH
Q 010736 442 NTDIAL--DEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESR---PTMKIVSQ 492 (502)
Q Consensus 442 ~~~~~~--~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~R---p~m~~v~~ 492 (502)
...... ....-|... ....+++..+++ .|+. +|++| |+++|+.+
T Consensus 279 ~~~i~~~~~~~~~p~~~---~~~s~~~~dli~---~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 279 YGKIVHYKEHLSLPLVD---EGVPEEARDFIQ---RLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHHTHHHHCCCC-------CCCHHHHHHHH---TTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHHHhcccCcCCCccc---cCCCHHHHHHHH---HHcC-ChhhcCCCCCHHHHhc
Confidence 000000 001111111 112356777777 8888 88887 68888753
No 387
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.00 E-value=3.7e-11 Score=124.31 Aligned_cols=110 Identities=24% Similarity=0.358 Sum_probs=74.0
Q ss_pred ccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccc--c
Q 010736 371 TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIAL--D 448 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~--~ 448 (502)
.+|||+++....... .....||..|+|||... ..++.++||||+||+++||+||+.|+...... ........ .
T Consensus 180 l~DfG~a~~~~~~~~-~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~i~~~~~ 254 (494)
T 3lij_A 180 IVDFGLSAVFENQKK-MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ---EILRKVEKGKY 254 (494)
T ss_dssp ECCCTTCEECBTTBC-BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHTCC
T ss_pred EEECCCCeECCCCcc-ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhCCC
Confidence 689999988754322 33467999999999876 46899999999999999999999997531110 00000000 0
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 449 EMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 449 ~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
....+... ...+++..+++ .|++.+|++||++.|+++
T Consensus 255 ~~~~~~~~----~~s~~~~~li~---~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 255 TFDSPEWK----NVSEGAKDLIK---QMLQFDSQRRISAQQALE 291 (494)
T ss_dssp CCCSGGGT----TSCHHHHHHHH---HHTCSSTTTSCCHHHHHT
T ss_pred CCCchhcc----cCCHHHHHHHH---HHCCCChhhCccHHHHhc
Confidence 00011111 12245666766 999999999999999874
No 388
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.00 E-value=3.9e-11 Score=116.36 Aligned_cols=120 Identities=23% Similarity=0.325 Sum_probs=72.8
Q ss_pred cccccCcccccCCCCC---CcccccccccccCcccccc-ceecccceeeeeceeeeehhcCCCCCCcccCCCC-------
Q 010736 370 ITGDFGIAKFLKPDSS---NWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSS------- 438 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~---~~~~~~gt~gy~aPE~~~~-~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~------- 438 (502)
..+|||+++....... ......++..|+|||.... ...+.++||||||++++||+||+.|+........
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 240 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES 240 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 4689999988753211 1233457889999998765 6789999999999999999999999853211000
Q ss_pred -CCCCccc--c---------cccccCCCCC--CCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 439 -PSLNTDI--A---------LDEMLDPRLP--VPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 439 -~~~~~~~--~---------~~~~~d~~l~--~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
....... . ......+..+ .......+++..+++ .|++.+|++||+++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLE---QILTFSPMDRLTAEEALS 305 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHH---TTSCSSGGGSCCHHHHHT
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHH---HHcCCCccccCCHHHHhC
Confidence 0000000 0 0000001000 000012245666666 999999999999999975
No 389
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=98.99 E-value=3.6e-11 Score=119.40 Aligned_cols=59 Identities=29% Similarity=0.526 Sum_probs=39.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccccc-ceecccceeeeeceeeeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~-~~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
..+|||+++..... .+...||..|+|||...+ ..++.++||||+||+++||+||+.|+.
T Consensus 172 kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 231 (367)
T 2fst_X 172 KILDFGLARHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231 (367)
T ss_dssp EECC------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEeecccccccccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 36899999876432 234678999999999876 678899999999999999999999985
No 390
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=98.98 E-value=7.5e-11 Score=116.77 Aligned_cols=61 Identities=28% Similarity=0.325 Sum_probs=41.8
Q ss_pred cccccCcccccCCCCCCcccccccccccCcccccc-ceecccceeeeeceeeeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYT-MKITEKCDVYSFGVLVLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~-~~~s~k~Dvysfgv~llElltg~~p~~ 431 (502)
..+|||+++...... ..+...|+..|+|||.... ...+.++||||+||+++||+||+.|+.
T Consensus 174 kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 235 (362)
T 3pg1_A 174 TICDFNLAREDTADA-NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR 235 (362)
T ss_dssp EECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEEecCccccccccc-ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCC
Confidence 368999998654332 2234578899999998876 668999999999999999999999985
No 391
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=98.97 E-value=1.8e-11 Score=123.09 Aligned_cols=111 Identities=19% Similarity=0.321 Sum_probs=75.0
Q ss_pred cccccCcccccCCCCC-CcccccccccccCccccccce----ecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCcc
Q 010736 370 ITGDFGIAKFLKPDSS-NWTGFAGTYGYIAPELAYTMK----ITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTD 444 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~-~~~~~~gt~gy~aPE~~~~~~----~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~ 444 (502)
..+|||+++.+..... ......||..|+|||...... ++.++|||||||+++||+||+.|+......
T Consensus 208 kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-------- 279 (410)
T 3v8s_A 208 KLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-------- 279 (410)
T ss_dssp EECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH--------
T ss_pred EEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh--------
Confidence 4789999987754322 223567999999999987654 889999999999999999999998521100
Q ss_pred cccccccC----CCCCCCCcchHHHHHHHHHHhhccCCcCCCC--CCCHHHHHH
Q 010736 445 IALDEMLD----PRLPVPSCSVQEKLISIMEVGFSCLKESPES--RPTMKIVSQ 492 (502)
Q Consensus 445 ~~~~~~~d----~~l~~~~~~~~~~~~~~~~val~C~~~~p~~--Rp~m~~v~~ 492 (502)
.....+.. ...+.. ....+++..+++ .|+...|++ ||++.||.+
T Consensus 280 ~~~~~i~~~~~~~~~p~~-~~~s~~~~~li~---~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 280 GTYSKIMNHKNSLTFPDD-NDISKEAKNLIC---AFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HHHHHHHTHHHHCCCCTT-CCCCHHHHHHHH---HHSSCGGGCTTSSCHHHHHT
T ss_pred hHHHHHHhccccccCCCc-ccccHHHHHHHH---HHccChhhhCCCCCHHHHhc
Confidence 00011111 111111 112356667776 788888888 999999865
No 392
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=98.97 E-value=5e-11 Score=113.99 Aligned_cols=113 Identities=23% Similarity=0.303 Sum_probs=73.6
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++....... .....|+..|+|||...+ ..+.++||||+|++++||+||+.|+...... ...... ...
T Consensus 164 kL~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~-~~~ 237 (287)
T 2wei_A 164 KIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY---DILKRV-ETG 237 (287)
T ss_dssp EECSTTGGGTBCCCSS-CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHH-HHC
T ss_pred EEeccCcceeecCCCc-cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH---HHHHHH-HcC
Confidence 3689999987654322 223458899999998765 4889999999999999999999997531110 000000 000
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
......+.. ....+++..+++ .|++.+|++||++.|+++
T Consensus 238 ~~~~~~~~~-~~~~~~~~~li~---~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 238 KYAFDLPQW-RTISDDAKDLIR---KMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCCCCSGGG-TTSCHHHHHHHH---HHTCSSGGGSCCHHHHHH
T ss_pred CCCCCchhh-hhcCHHHHHHHH---HHcccChhhCcCHHHHhc
Confidence 000011000 112245666666 999999999999999986
No 393
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=98.97 E-value=3.3e-10 Score=119.58 Aligned_cols=115 Identities=31% Similarity=0.318 Sum_probs=72.3
Q ss_pred ccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccC----C------CCCC
Q 010736 371 TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSS----T------SSPS 440 (502)
Q Consensus 371 ~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~----~------~~~~ 440 (502)
.+|||+++....... .....|+.+|+|||...+..++.++||||||++++|++||+.|+..... . ....
T Consensus 165 L~DFG~a~~~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~ 243 (676)
T 3qa8_A 165 IIDLGYAKELDQGEL-CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEH 243 (676)
T ss_dssp ECSCCCCCBTTSCCC-CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------
T ss_pred Ecccccccccccccc-cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchh
Confidence 689999988754332 2446789999999999999999999999999999999999999853100 0 0000
Q ss_pred -CCcccccccc-cCCCCCCC---CcchHHHHHHHHHHhhccCCcCCCCCCCHHH
Q 010736 441 -LNTDIALDEM-LDPRLPVP---SCSVQEKLISIMEVGFSCLKESPESRPTMKI 489 (502)
Q Consensus 441 -~~~~~~~~~~-~d~~l~~~---~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~ 489 (502)
...+.....+ +...++.+ .....+++..+++ .|++.+|++||++.|
T Consensus 244 ~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~---~mL~~DP~kRPTa~e 294 (676)
T 3qa8_A 244 IVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQ---CMLMWHQRQRGTDPQ 294 (676)
T ss_dssp CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHH---HHSCSSCC---CCTT
T ss_pred hhhhhhhccccccccccCCchhhchhhhHHHHHHHH---HHccCCHhhCcCHHH
Confidence 0000000000 11111111 1123456666766 999999999999977
No 394
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=98.97 E-value=2.8e-11 Score=116.32 Aligned_cols=111 Identities=21% Similarity=0.329 Sum_probs=73.8
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccc------cceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAY------TMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNT 443 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~------~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~ 443 (502)
..+|||+++....... .....|+..|+|||... ....+.++||||||++++||+||+.|+......
T Consensus 164 kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------- 235 (298)
T 1phk_A 164 KLTDFGFSCQLDPGEK-LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM------- 235 (298)
T ss_dssp EECCCTTCEECCTTCC-BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------
T ss_pred EEecccchhhcCCCcc-cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH-------
Confidence 4689999987754332 23457899999999875 345788999999999999999999997421100
Q ss_pred ccccccccCC--CCCCCC-cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 444 DIALDEMLDP--RLPVPS-CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 444 ~~~~~~~~d~--~l~~~~-~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.....+... ....+. ....+++.++++ .|++.+|++||++.|+++
T Consensus 236 -~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 236 -LMLRMIMSGNYQFGSPEWDDYSDTVKDLVS---RFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp -HHHHHHHHTCCCCCTTTGGGSCHHHHHHHH---HHCCSSGGGSCCHHHHTT
T ss_pred -HHHHHHhcCCcccCcccccccCHHHHHHHH---HHccCCcccCCCHHHHHh
Confidence 000000000 000000 112345666666 999999999999999864
No 395
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=98.97 E-value=5.1e-11 Score=123.58 Aligned_cols=110 Identities=24% Similarity=0.301 Sum_probs=74.9
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++....... .....||..|+|||... ..++.++||||+||+++||+||+.|+...... .....
T Consensus 189 kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~ 258 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDYK-LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--------DIIKK 258 (504)
T ss_dssp EECCCTTCEECCTTSC-BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHH
T ss_pred EEEECCCCEEcCCCCc-cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHH
Confidence 3689999988754322 33457999999999876 46899999999999999999999997531110 00011
Q ss_pred ccCCCCCCCC---cchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPS---CSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~---~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
+.......+. ....+++..+++ .|++.+|++||++.|+++
T Consensus 259 i~~~~~~~~~~~~~~~s~~~~~li~---~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 259 VEKGKYYFDFNDWKNISDEAKELIK---LMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHCCCCCCHHHHTTSCHHHHHHHH---HHTCSSTTTSCCHHHHHT
T ss_pred HHcCCCCCCccccCCCCHHHHHHHH---HHcCCChhHCCCHHHHhc
Confidence 1111110000 012245666776 999999999999999875
No 396
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=98.96 E-value=2.7e-11 Score=124.96 Aligned_cols=113 Identities=24% Similarity=0.309 Sum_probs=75.2
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++...... ......||..|+|||...+ .++.++||||+||+++||+||+.|+...... ...... ...
T Consensus 169 kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~i-~~~ 242 (484)
T 3nyv_A 169 RIIDFGLSTHFEASK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY---DILKKV-EKG 242 (484)
T ss_dssp EECCTTHHHHBCCCC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHH-HHC
T ss_pred EEEeeeeeEEccccc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH---HHHHHH-HcC
Confidence 368999998775433 2334579999999999865 6889999999999999999999997531110 000000 000
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
......+.. ....+++..+++ .|++.+|++||++.|+++
T Consensus 243 ~~~~~~~~~-~~~s~~~~~li~---~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 243 KYTFELPQW-KKVSESAKDLIR---KMLTYVPSMRISARDALD 281 (484)
T ss_dssp CCCCCSGGG-GGSCHHHHHHHH---HHTCSSGGGSCCHHHHHT
T ss_pred CCCCCCccc-ccCCHHHHHHHH---HHCCCChhHCcCHHHHhh
Confidence 001111100 112355667777 999999999999999875
No 397
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.90 E-value=1.1e-10 Score=114.92 Aligned_cols=180 Identities=17% Similarity=0.207 Sum_probs=104.9
Q ss_pred CCCEEEEEecCCCCce-ec-------CcccCCCCCCCCEEECCCCccc---------ccCCccCcCCCCCCEEEccCCcC
Q 010736 69 AGRVINISLRGVGLKG-KL-------HAFSFSSFPHLAYLDLRDNKLF---------GTIPPQISNLTNLSILSLGGNQF 131 (502)
Q Consensus 69 ~~~v~~L~L~~~~l~g-~l-------~~~~~~~l~~L~~L~Ls~N~l~---------g~~p~~l~~l~~L~~L~Ls~N~l 131 (502)
..+|+.|.+...++.| .+ .. +...+++|+.|.+..+... +.++..+..+++|+.|+|++|.-
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~-s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~ 184 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVE-NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNN 184 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHT-THHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBT
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHH-hhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCC
Confidence 3468888887666553 11 11 2456789999988765331 22445567788999999988731
Q ss_pred cCCCCcccCCCCCCcEEEccCCcCcccCCcccC--CCCCCcEEEccc--Cccccc-----CCcCC--CCCCCCCeEEccc
Q 010736 132 SGNIPHEVGLMSHLKILYIDSNQLDGSIPLEVG--QLSSMVELALFS--NNLNGS-----VPHSL--GNLTQISMLFLHD 200 (502)
Q Consensus 132 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~~--~~l~~L~~L~L~~ 200 (502)
. .++. +. +++|++|+|..|.++......+. .+++|+.|+|+. |...+. +...+ ..+++|++|+|.+
T Consensus 185 l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~ 261 (362)
T 2ra8_A 185 L-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVD 261 (362)
T ss_dssp C-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEES
T ss_pred c-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCC
Confidence 1 2333 33 78899999988877643333333 678888888753 222111 00112 2467777777777
Q ss_pred ccccccCCccC---cCCccCCccccccccccCc----ccccccCCCCCcEEEeeCcccc
Q 010736 201 NSFSGFIPPDI---GNLKSISILSLAINQFSGP----IPLSLGNLTNLKQFSLVYNNLY 252 (502)
Q Consensus 201 N~l~~~~p~~~---~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 252 (502)
|.+....+..+ ..+++|++|+++.|.+++. ++..+..+++|+.|++++|.++
T Consensus 262 ~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 262 AEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp CTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 77664322222 2356667777766666542 2223334566666666666554
No 398
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=98.87 E-value=1.2e-10 Score=111.96 Aligned_cols=112 Identities=24% Similarity=0.353 Sum_probs=64.7
Q ss_pred cccccCcccccCCCC--------------CCcccccccccccCccccccc-eecccceeeeeceeeeehhcCCCCCCccc
Q 010736 370 ITGDFGIAKFLKPDS--------------SNWTGFAGTYGYIAPELAYTM-KITEKCDVYSFGVLVLEVIKGKHPRDFLS 434 (502)
Q Consensus 370 l~~dfGl~~ll~~~~--------------~~~~~~~gt~gy~aPE~~~~~-~~s~k~Dvysfgv~llElltg~~p~~~~~ 434 (502)
..+|||+++...... .......|+..|+|||...+. ..+.++||||||++++||+| |+....
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~ 232 (303)
T 1zy4_A 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM 232 (303)
T ss_dssp EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch
Confidence 468999998764211 112345688999999998754 68899999999999999999 332100
Q ss_pred CCCCCCCCcccc-cccccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHH
Q 010736 435 STSSPSLNTDIA-LDEMLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQ 492 (502)
Q Consensus 435 ~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~ 492 (502)
.. ........ ......+... .....++.++++ .|++.+|++||++.|+++
T Consensus 233 ~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~---~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 233 ER--VNILKKLRSVSIEFPPDFD---DNKMKVEKKIIR---LLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HH--HHHHHHHHSTTCCCCTTCC---TTTSHHHHHHHH---HHTCSSGGGSCCHHHHHH
T ss_pred hH--HHHHHhccccccccCcccc---ccchHHHHHHHH---HHHhcCcccCcCHHHHhC
Confidence 00 00000000 0000111111 112244556666 999999999999999975
No 399
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.80 E-value=5.7e-10 Score=119.94 Aligned_cols=104 Identities=20% Similarity=0.192 Sum_probs=70.4
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCCCCCCCCccccccc
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSSPSLNTDIALDE 449 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~~~~~~~~~~~~ 449 (502)
..+|||+++..... ....||.+|+|||...+.. +.++|||||||+++||++|..|+...... .
T Consensus 221 kl~DFG~a~~~~~~----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~------------~ 283 (681)
T 2pzi_A 221 KLIDLGAVSRINSF----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD------------G 283 (681)
T ss_dssp EECCCTTCEETTCC----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS------------S
T ss_pred EEEecccchhcccC----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc------------c
Confidence 36899999877543 3457999999999987654 88999999999999999998886421100 0
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHhhccCCcCCCCCCC-HHHHHHHHHh
Q 010736 450 MLDPRLPVPSCSVQEKLISIMEVGFSCLKESPESRPT-MKIVSQQLRI 496 (502)
Q Consensus 450 ~~d~~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~-m~~v~~~l~~ 496 (502)
+. ... +.....+++..+++ .|++.+|++||+ +.++...+..
T Consensus 284 ~~-~~~--~~~~~~~~l~~li~---~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 284 LP-EDD--PVLKTYDSYGRLLR---RAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp CC-TTC--HHHHHCHHHHHHHH---HHTCSSGGGSCSSHHHHHHHHHH
T ss_pred cc-ccc--cccccCHHHHHHHh---hhccCChhhCCCHHHHHHHHHHH
Confidence 00 000 00001134555555 999999999995 5556555544
No 400
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.76 E-value=1.9e-06 Score=85.42 Aligned_cols=284 Identities=10% Similarity=0.060 Sum_probs=162.9
Q ss_pred CEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEc
Q 010736 71 RVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYI 150 (502)
Q Consensus 71 ~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 150 (502)
.++.+.++. +++ .|...+|.++.+|+.++|..+ ++.+-..+|.++ +|+.+.+..+ ++..-..+|.. .+|+.+.+
T Consensus 47 ~i~~v~ip~-~vt-~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~l 120 (379)
T 4h09_A 47 RISEVRVNS-GIT-SIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEF 120 (379)
T ss_dssp GCSEEEECT-TEE-EECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEEC
T ss_pred CCEEEEeCC-Ccc-ChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccC
Confidence 355555543 333 456667888888888888654 665556677776 5777776544 44233344544 36888887
Q ss_pred cCCcCcccCCcccCCCCCCcEEEcccCcccccCCcCCCCCCCCCeEEccccccccc------------CCccCcCCccCC
Q 010736 151 DSNQLDGSIPLEVGQLSSMVELALFSNNLNGSVPHSLGNLTQISMLFLHDNSFSGF------------IPPDIGNLKSIS 218 (502)
Q Consensus 151 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~------------~p~~~~~l~~L~ 218 (502)
..+ ++......|... +++.+.+..+ ++......|.....++.+.+..+..... ....+.....+.
T Consensus 121 p~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (379)
T 4h09_A 121 PGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGT 197 (379)
T ss_dssp CTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCS
T ss_pred CCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccccccc
Confidence 655 232333334433 4555554433 3334455566677777766654432211 011122222233
Q ss_pred ccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCCcEEEccCCc
Q 010736 219 ILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENR 297 (502)
Q Consensus 219 ~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~ 297 (502)
.+.+... ........+....+|+.+.+..+ +.......+.. ..|+.+.+..+ ++.+....+....+|+.+.+..+
T Consensus 198 ~~~~~~~-~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~- 273 (379)
T 4h09_A 198 EFTIPST-VKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK- 273 (379)
T ss_dssp EEECCTT-CCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-
T ss_pred ccccccc-eeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-
Confidence 3322221 11122334555666777666543 22122222322 56777777654 55555556677777888877543
Q ss_pred cccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCC
Q 010736 298 FQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRN 368 (502)
Q Consensus 298 l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N 368 (502)
++..-...|.+|.+|+.+.+.++.++.....+|..+.+|+.++|..+ ++..-..+|.+|.+|+.+.+..+
T Consensus 274 i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 274 VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 44344556778888888888877777666778888888888888654 55555667888888888877543
No 401
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.70 E-value=4.7e-09 Score=103.32 Aligned_cols=35 Identities=17% Similarity=0.189 Sum_probs=19.0
Q ss_pred CCCCEEECCCCcccc-c-------CCccCcCCCCCCEEEccCC
Q 010736 95 PHLAYLDLRDNKLFG-T-------IPPQISNLTNLSILSLGGN 129 (502)
Q Consensus 95 ~~L~~L~Ls~N~l~g-~-------~p~~l~~l~~L~~L~Ls~N 129 (502)
..++.|.+......| . +..++..+++|+.|.+..+
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~ 149 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDI 149 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCC
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCc
Confidence 356677766544332 1 1223445677777777654
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.60 E-value=1.6e-09 Score=101.36 Aligned_cols=105 Identities=24% Similarity=0.267 Sum_probs=73.5
Q ss_pred CCCCCCCCE--EECCCCccc---ccCCccCcCCCCCCEEEccCCcCcC--CCCcccCCCCCCcEEEccCCcCcccCCccc
Q 010736 91 FSSFPHLAY--LDLRDNKLF---GTIPPQISNLTNLSILSLGGNQFSG--NIPHEVGLMSHLKILYIDSNQLDGSIPLEV 163 (502)
Q Consensus 91 ~~~l~~L~~--L~Ls~N~l~---g~~p~~l~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 163 (502)
|...+.|+. ++++.|... +.++....++++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 445555555 677777432 2233333568899999999999987 4566677889999999999999865 334
Q ss_pred CCCC--CCcEEEcccCcccccCCc-------CCCCCCCCCeEE
Q 010736 164 GQLS--SMVELALFSNNLNGSVPH-------SLGNLTQISMLF 197 (502)
Q Consensus 164 ~~l~--~L~~L~L~~N~l~~~~p~-------~~~~l~~L~~L~ 197 (502)
..+. +|++|+|++|.+.+.+|. .+..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 899999999999876653 245566776665
No 403
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=98.60 E-value=1.1e-08 Score=98.19 Aligned_cols=79 Identities=23% Similarity=0.389 Sum_probs=48.2
Q ss_pred eecccceeeeeceeeeehhcCCCCCCcccCCCC-CCCCcccccccccCCCCCCCC---cchHHHHHHHHHHhhccCCcCC
Q 010736 406 KITEKCDVYSFGVLVLEVIKGKHPRDFLSSTSS-PSLNTDIALDEMLDPRLPVPS---CSVQEKLISIMEVGFSCLKESP 481 (502)
Q Consensus 406 ~~s~k~Dvysfgv~llElltg~~p~~~~~~~~~-~~~~~~~~~~~~~d~~l~~~~---~~~~~~~~~~~~val~C~~~~p 481 (502)
.++.++||||+||+++||+||+.|+........ ..... .+.......+. ....+++..+++ .|++.+|
T Consensus 174 ~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~---~~l~~dP 245 (299)
T 3m2w_A 174 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT-----RIRMGQYEFPNPEWSEVSEEVKMLIR---NLLKTEP 245 (299)
T ss_dssp GGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCC-----SSCTTCCSSCHHHHTTSCHHHHHHHH---HHTCSST
T ss_pred cCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHH-----HHhhccccCCchhcccCCHHHHHHHH---HHcccCh
Confidence 357789999999999999999999853221111 00000 00001110000 012245666666 9999999
Q ss_pred CCCCCHHHHHH
Q 010736 482 ESRPTMKIVSQ 492 (502)
Q Consensus 482 ~~Rp~m~~v~~ 492 (502)
++||++.|+++
T Consensus 246 ~~Rps~~e~l~ 256 (299)
T 3m2w_A 246 TQRMTITEFMN 256 (299)
T ss_dssp TTSCCHHHHHT
T ss_pred hhCCCHHHHhc
Confidence 99999999986
No 404
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=98.59 E-value=7.3e-09 Score=98.92 Aligned_cols=116 Identities=6% Similarity=0.060 Sum_probs=70.2
Q ss_pred CCCCeeeecCCccc-cccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCCCCCcccCC
Q 010736 358 PKLGALNISRNNIT-GDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKHPRDFLSST 436 (502)
Q Consensus 358 ~~L~~L~l~~N~l~-~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~p~~~~~~~ 436 (502)
.++.|.||+..||. .+-|-.++ ++.+|++| .+.++|||||||+++||+||+.|++.....
T Consensus 148 ~givH~Dikp~NIll~~~g~~kl------------~~~~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~ 208 (286)
T 3uqc_A 148 AGVALSIDHPSRVRVSIDGDVVL------------AYPATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVR 208 (286)
T ss_dssp TTCCCCCCSGGGEEEETTSCEEE------------CSCCCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBC
T ss_pred CCCccCCCCcccEEEcCCCCEEE------------EeccccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcc
Confidence 35667777766653 33333332 24466655 688999999999999999999998643221
Q ss_pred CCCCCCcccccccccCC-CCCCCCcchHHHHHHHHHHhhccCCcCCCCCCCHHHHHHHHHhhcC
Q 010736 437 SSPSLNTDIALDEMLDP-RLPVPSCSVQEKLISIMEVGFSCLKESPESRPTMKIVSQQLRISAP 499 (502)
Q Consensus 437 ~~~~~~~~~~~~~~~d~-~l~~~~~~~~~~~~~~~~val~C~~~~p~~Rp~m~~v~~~l~~~~~ 499 (502)
................+ .+. ....+++..+++ .|++.+|++| ++.|+++.|+....
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~---~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 209 SGLAPAERDTAGQPIEPADID---RDIPFQISAVAA---RSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp CCSEECCBCTTSCBCCHHHHC---TTSCHHHHHHHH---HHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred hhhHHHHHHhccCCCChhhcc---cCCCHHHHHHHH---HHcccCCccC-CHHHHHHHHHHHhc
Confidence 11000000000000000 000 112245666666 9999999999 99999999998643
No 405
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.51 E-value=8.9e-09 Score=91.49 Aligned_cols=114 Identities=19% Similarity=0.216 Sum_probs=69.3
Q ss_pred CCCCCCCCEEECCCC-ccccc----CCccCcCCCCCCEEEccCCcCcCC----CCcccCCCCCCcEEEccCCcCccc---
Q 010736 91 FSSFPHLAYLDLRDN-KLFGT----IPPQISNLTNLSILSLGGNQFSGN----IPHEVGLMSHLKILYIDSNQLDGS--- 158 (502)
Q Consensus 91 ~~~l~~L~~L~Ls~N-~l~g~----~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~--- 158 (502)
+...+.|++|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 566777888888887 77532 344566677788888888877632 233344456777777777777642
Q ss_pred -CCcccCCCCCCcEEEc--ccCcccccC----CcCCCCCCCCCeEEccccccc
Q 010736 159 -IPLEVGQLSSMVELAL--FSNNLNGSV----PHSLGNLTQISMLFLHDNSFS 204 (502)
Q Consensus 159 -~p~~~~~l~~L~~L~L--~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~ 204 (502)
+...+...++|++|+| ++|.+.... ...+...+.|++|+|++|.+.
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2344555566667776 556665321 122333455666666666554
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.50 E-value=2.2e-05 Score=77.68 Aligned_cols=275 Identities=12% Similarity=0.037 Sum_probs=177.2
Q ss_pred CEEEEEecCCCCceecCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEc
Q 010736 71 RVINISLRGVGLKGKLHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYI 150 (502)
Q Consensus 71 ~v~~L~L~~~~l~g~l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 150 (502)
.++.|+|+.+ ++ .|...+|.+. +|+.+.+..+ ++......|.+ .+|+.+.+..+- +..-...|.+. +|+.+.+
T Consensus 70 ~L~~I~lp~~-v~-~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~~-~~i~~~~F~~~-~l~~~~~ 142 (379)
T 4h09_A 70 NMTKVTVAST-VT-SIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGAT-TEIGNYIFYNS-SVKRIVI 142 (379)
T ss_dssp TCCEEEECTT-CC-EECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTTC-CEECTTTTTTC-CCCEEEE
T ss_pred CCCEEEeCCc-ce-EechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCcc-ccccccccccc-eeeeeec
Confidence 5788888653 44 5677778887 6888887654 55455556665 489999998663 32334445544 5666666
Q ss_pred cCCcCcccCCcccCCCCCCcEEEcccCccccc------------CCcCCCCCCCCCeEEcccccccccCCccCcCCccCC
Q 010736 151 DSNQLDGSIPLEVGQLSSMVELALFSNNLNGS------------VPHSLGNLTQISMLFLHDNSFSGFIPPDIGNLKSIS 218 (502)
Q Consensus 151 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~------------~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 218 (502)
..+ ++......|....+++.+.+..+..... ....+.....+..+.+.... .......+....+|+
T Consensus 143 ~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~ 220 (379)
T 4h09_A 143 PKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLK 220 (379)
T ss_dssp CTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCS
T ss_pred cce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccce-eEEeecccccccccc
Confidence 543 4445556677888888887765443211 11223334445555443332 223344566667777
Q ss_pred ccccccccccCcccccccCCCCCcEEEeeCccccccCCCCCcc-ccccEEECcCCcCcccCCccccCCCCCcEEEccCCc
Q 010736 219 ILSLAINQFSGPIPLSLGNLTNLKQFSLVYNNLYGSIPPSLDN-LVLTKLSLDDNHFTSYLPQNICRGGALQIFTVSENR 297 (502)
Q Consensus 219 ~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~n~ 297 (502)
.+.+..+ +.......+.++..|+.+.+..+ ++......+.. ..++.+.+..+ ++......|..+.+|+.+.+.++.
T Consensus 221 ~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~ 297 (379)
T 4h09_A 221 KITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSA 297 (379)
T ss_dssp EEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTT
T ss_pred eeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccc
Confidence 7777544 33344556778888888888765 44333334443 56788877543 555555677888999999998888
Q ss_pred cccccCcccccCCCCcEEeCCCCccccccCcccCCCCCCcEEEccCcccccccCccccCCCC
Q 010736 298 FQGTIPKSLRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPK 359 (502)
Q Consensus 298 l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 359 (502)
++..-...|.+|.+|+.+.+..+ ++..-..+|..+.+|+.+.+..+ ++..-..+|.++..
T Consensus 298 i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~~ 357 (379)
T 4h09_A 298 IETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSSI 357 (379)
T ss_dssp CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSSC
T ss_pred cceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCCC
Confidence 87666778999999999999654 76666778999999999988654 55444556666543
No 407
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.39 E-value=2.2e-08 Score=88.95 Aligned_cols=95 Identities=15% Similarity=0.137 Sum_probs=59.9
Q ss_pred cCCccCcCCCCCCEEEccCC-cCcCC----CCcccCCCCCCcEEEccCCcCccc----CCcccCCCCCCcEEEcccCccc
Q 010736 110 TIPPQISNLTNLSILSLGGN-QFSGN----IPHEVGLMSHLKILYIDSNQLDGS----IPLEVGQLSSMVELALFSNNLN 180 (502)
Q Consensus 110 ~~p~~l~~l~~L~~L~Ls~N-~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 180 (502)
.+...+...+.|++|+|++| .+... +...+...++|++|+|++|++... +...+...++|++|+|++|.+.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34456777889999999998 88632 334456677888888888887642 2233444566777777777765
Q ss_pred cc----CCcCCCCCCCCCeEEc--cccccc
Q 010736 181 GS----VPHSLGNLTQISMLFL--HDNSFS 204 (502)
Q Consensus 181 ~~----~p~~~~~l~~L~~L~L--~~N~l~ 204 (502)
.. +...+...+.|++|+| ++|.++
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 32 2333444555666666 555554
No 408
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.97 E-value=1e-05 Score=66.94 Aligned_cols=68 Identities=19% Similarity=0.155 Sum_probs=55.4
Q ss_pred cEEeCCCCccc-cccCcccCCCCCCcEEEccCcccccccCccccCCCCCCeeeecCCccccccCcccccCC
Q 010736 313 IRVRLDGNNLT-GNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGDFGIAKFLKP 382 (502)
Q Consensus 313 ~~L~l~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~dfGl~~ll~~ 382 (502)
..++.+++.++ ..+|..+ .++|++|+|++|+|+...+..|..+++|++|+|++|++.||+.+.++..+
T Consensus 11 ~~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~~l~~w 79 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLVPLRAW 79 (130)
T ss_dssp TEEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGHHHHHH
T ss_pred CEEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccHHHHHH
Confidence 36778888886 2445433 25799999999999988888899999999999999999999999877643
No 409
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.78 E-value=5e-06 Score=72.15 Aligned_cols=91 Identities=7% Similarity=-0.011 Sum_probs=57.7
Q ss_pred CCcEEEccCCccccccCcccccCCCCcEEeCCCCc-cccccCcccCCC----CCCcEEEccCcc-cccccCccccCCCCC
Q 010736 287 ALQIFTVSENRFQGTIPKSLRNCTSLIRVRLDGNN-LTGNISKAFGIY----PNLTFIDLSRNN-FYGEISSNFGECPKL 360 (502)
Q Consensus 287 ~L~~L~ls~n~l~~~~~~~l~~l~~L~~L~l~~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~~~~~~~~~~L 360 (502)
.|+.|+++++.++..--..+..+++|+.|+|+++. +++.--..+..+ ++|++|+|+++. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555544333445667777777777764 554333334433 468888888764 665444456678888
Q ss_pred CeeeecCCccccccCcc
Q 010736 361 GALNISRNNITGDFGIA 377 (502)
Q Consensus 361 ~~L~l~~N~l~~dfGl~ 377 (502)
++|++++++-++|.|++
T Consensus 142 ~~L~L~~c~~Itd~gl~ 158 (176)
T 3e4g_A 142 KYLFLSDLPGVKEKEKI 158 (176)
T ss_dssp CEEEEESCTTCCCHHHH
T ss_pred CEEECCCCCCCCchHHH
Confidence 89999888888887764
No 410
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.71 E-value=6.1e-06 Score=71.58 Aligned_cols=82 Identities=10% Similarity=0.066 Sum_probs=36.5
Q ss_pred CCCEEECCCCcccccCCccCcCCCCCCEEEccCCc-CcCCCCcccCCC----CCCcEEEccCCc-CcccCCcccCCCCCC
Q 010736 96 HLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQ-FSGNIPHEVGLM----SHLKILYIDSNQ-LDGSIPLEVGQLSSM 169 (502)
Q Consensus 96 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~L 169 (502)
+|++||++++.++..--..+.++++|++|+|++|. ++..--..++.+ ++|++|+|++|. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555554433445555555666655553 442211223332 235555555542 432222223334444
Q ss_pred cEEEcccC
Q 010736 170 VELALFSN 177 (502)
Q Consensus 170 ~~L~L~~N 177 (502)
+.|+++++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 44444443
No 411
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.07 E-value=4.7e-05 Score=79.59 Aligned_cols=71 Identities=15% Similarity=-0.042 Sum_probs=39.4
Q ss_pred CCCCeeeecCCcc---------ccccCcccccCCCCCCcccccccccccCccccccceecccceeeeeceeeeehhcCCC
Q 010736 358 PKLGALNISRNNI---------TGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVLVLEVIKGKH 428 (502)
Q Consensus 358 ~~L~~L~l~~N~l---------~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~llElltg~~ 428 (502)
.++.|.||+--|| ++|||+++.+..+....+...||++|++||...+ +...++|+||.|+..+++.+|..
T Consensus 358 ~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 358 QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp TTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred CCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence 4566667766554 6899999988765555566789999999999865 46678999999999999887654
Q ss_pred C
Q 010736 429 P 429 (502)
Q Consensus 429 p 429 (502)
|
T Consensus 437 ~ 437 (569)
T 4azs_A 437 N 437 (569)
T ss_dssp H
T ss_pred h
Confidence 4
No 412
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.05 E-value=9.9e-05 Score=65.19 Aligned_cols=112 Identities=13% Similarity=0.129 Sum_probs=62.3
Q ss_pred CCCCCCCCEEECCCC-cccc----cCCccCcCCCCCCEEEccCCcCcCC----CCcccCCCCCCcEEEccCCcCccc---
Q 010736 91 FSSFPHLAYLDLRDN-KLFG----TIPPQISNLTNLSILSLGGNQFSGN----IPHEVGLMSHLKILYIDSNQLDGS--- 158 (502)
Q Consensus 91 ~~~l~~L~~L~Ls~N-~l~g----~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~--- 158 (502)
+.+-+.|+.|+|++| +|.. .+-..+..-+.|+.|+|++|+|... +-..+..-+.|++|+|++|+|...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 445567888888775 6643 2344556667788888888877632 222333456677777777777632
Q ss_pred -CCcccCCCCCCcEEEcccCc---ccc----cCCcCCCCCCCCCeEEccccc
Q 010736 159 -IPLEVGQLSSMVELALFSNN---LNG----SVPHSLGNLTQISMLFLHDNS 202 (502)
Q Consensus 159 -~p~~~~~l~~L~~L~L~~N~---l~~----~~p~~~~~l~~L~~L~L~~N~ 202 (502)
+-..+..-+.|++|+|++|. +.. .+...+..-+.|+.|+++.|.
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 22234444556677766542 221 111223334556666665554
No 413
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.94 E-value=0.0016 Score=53.48 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=17.0
Q ss_pred CCCEEEccCCcCcCCCCcccCCCCCCcEEEccCCcC
Q 010736 120 NLSILSLGGNQFSGNIPHEVGLMSHLKILYIDSNQL 155 (502)
Q Consensus 120 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 155 (502)
+|++|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 344555555555433333444445555555555543
No 414
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=96.94 E-value=7.6e-05 Score=72.45 Aligned_cols=56 Identities=11% Similarity=-0.003 Sum_probs=45.8
Q ss_pred cccccCcccccCCCCCCcccccccccccCccccccceecccceeeeecee-eeehhcCCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSNWTGFAGTYGYIAPELAYTMKITEKCDVYSFGVL-VLEVIKGKHPRD 431 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~~~~~~gt~gy~aPE~~~~~~~s~k~Dvysfgv~-llElltg~~p~~ 431 (502)
.++|||+++..... ...||..|+|||...+.. +.++||||+++. ..++.+|..|+.
T Consensus 222 kL~DFG~a~~~~~~-----~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 222 SIIDYTLSRLERDG-----IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp EECCCTTCBEEETT-----EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred EEeeccccEecCCC-----cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 46899999987532 347899999999998666 889999998766 778889999974
No 415
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.53 E-value=0.0011 Score=58.39 Aligned_cols=88 Identities=13% Similarity=0.206 Sum_probs=49.5
Q ss_pred cCCCCCcEEEccCCccccc----cCcccccCCCCcEEeCCCCccccc----cCcccCCCCCCcEEEccCc---cccc---
Q 010736 283 CRGGALQIFTVSENRFQGT----IPKSLRNCTSLIRVRLDGNNLTGN----ISKAFGIYPNLTFIDLSRN---NFYG--- 348 (502)
Q Consensus 283 ~~~~~L~~L~ls~n~l~~~----~~~~l~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~Ls~N---~l~~--- 348 (502)
..-..|+.|+|++|.+... +...+..-+.|+.|+|++|.|... +.+++..-..|+.|+|++| .+..
T Consensus 67 ~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~ 146 (197)
T 1pgv_A 67 CNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVE 146 (197)
T ss_dssp TTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHH
T ss_pred hhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHH
Confidence 3445566666666666532 223344556677777777777643 2234445566777777654 2222
Q ss_pred -ccCccccCCCCCCeeeecCCcc
Q 010736 349 -EISSNFGECPKLGALNISRNNI 370 (502)
Q Consensus 349 -~~~~~~~~~~~L~~L~l~~N~l 370 (502)
.+...+..-+.|+.|+++.|.+
T Consensus 147 ~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 147 MDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHHhCCCcCeEeccCCCc
Confidence 1233445556777777776654
No 416
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=88.17 E-value=0.0092 Score=61.74 Aligned_cols=61 Identities=13% Similarity=0.069 Sum_probs=46.4
Q ss_pred cccccCcccccCCCCCC-------cccccccccccCcccccc--ceecccceeeeeceeeeehhcCCCCC
Q 010736 370 ITGDFGIAKFLKPDSSN-------WTGFAGTYGYIAPELAYT--MKITEKCDVYSFGVLVLEVIKGKHPR 430 (502)
Q Consensus 370 l~~dfGl~~ll~~~~~~-------~~~~~gt~gy~aPE~~~~--~~~s~k~Dvysfgv~llElltg~~p~ 430 (502)
..+|||+++........ ...+.||..|+|||.... ..++.+.|.|+..+-.+|-+.+|.++
T Consensus 469 kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 469 YIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp EECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred EEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 36899999988543211 124679999999999976 56778889999888888887777664
No 417
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=48.15 E-value=57 Score=24.52 Aligned_cols=37 Identities=11% Similarity=0.003 Sum_probs=14.7
Q ss_pred ccCcCCCCCCEEEccCCcCcCCCCcccCCCCCCcEEEc
Q 010736 113 PQISNLTNLSILSLGGNQFSGNIPHEVGLMSHLKILYI 150 (502)
Q Consensus 113 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 150 (502)
..|.++++|+.+.+-.+ ++..-..+|.++.+|+.+.+
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 34444444444444332 22222333444444444444
No 418
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=43.58 E-value=48 Score=24.91 Aligned_cols=44 Identities=18% Similarity=0.138 Sum_probs=35.7
Q ss_pred cCcccCCCCCCCCEEECCCCcccccCCccCcCCCCCCEEEccCCc
Q 010736 86 LHAFSFSSFPHLAYLDLRDNKLFGTIPPQISNLTNLSILSLGGNQ 130 (502)
Q Consensus 86 l~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~ 130 (502)
|....|.++++|+.+.+..+ ++.+-...|.+|.+|+.+.+....
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 44556999999999999875 665677889999999999987653
No 419
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=29.23 E-value=19 Score=18.20 Aligned_cols=9 Identities=33% Similarity=1.365 Sum_probs=7.1
Q ss_pred CCCccceee
Q 010736 57 SPCAWSGIS 65 (502)
Q Consensus 57 ~~C~W~Gv~ 65 (502)
..|+|.|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 469999975
No 420
>1kdl_A YOPD protein; yersinia, amphipathic alpha helix, beta turn, structural protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=26.19 E-value=47 Score=17.89 Aligned_cols=14 Identities=29% Similarity=0.169 Sum_probs=10.8
Q ss_pred HHHHHHHHHhhcCC
Q 010736 487 MKIVSQQLRISAPS 500 (502)
Q Consensus 487 m~~v~~~l~~~~~~ 500 (502)
|+||++.++....|
T Consensus 4 MkDvlql~qQy~qs 17 (26)
T 1kdl_A 4 MKDVLRLIEQYVSS 17 (26)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHH
Confidence 88999988876544
Done!