BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010737
(502 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 210/431 (48%), Gaps = 31/431 (7%)
Query: 77 PTGTIHLHALGNTVTSNPENVE-YILKTRFDNYPKG-KPFSVILGD-LLGGGIFN-VDGN 132
P +++ + + ++PE+V+ +++ T+++ K + + G+ L G G+ + +
Sbjct: 25 PVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSECNYE 84
Query: 133 SWKFQRKIASVELGSFNFKMYAFELVTAEIRFRLIPLLSSAANKVNNILDLQDVFRRFSF 192
W QR++ ++L + + E +L+ +L + A+ + +QD+ +
Sbjct: 85 RWHKQRRV--IDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPV-SMQDMLTYTAM 141
Query: 193 DSICKFSFGLDPECLM-LNLPVSKFATAFDLASKLSAERALAPSPIVWKIKRLLNIGSEK 251
D + K +FG++ L+ P+S+ + ++A R + K K+L +
Sbjct: 142 DILAKAAFGMETSMLLGAQKPLSQAVKL--MLEGITASRNTLAKFLPGKRKQL------R 193
Query: 252 QLKGAIKLVNELAETMIHQRQQM---GFSKKNDLLSRFMASID---DDKYLRDIVVSFLL 305
+++ +I+ + ++ + +R++ G D+L++ + + + DD+ L D V+F +
Sbjct: 194 EVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQDDEGLLDNFVTFFI 253
Query: 306 AGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYES 365
AG +T A+ L LS+ E+ + ++ E D+++ + L FE L L YL+ + ES
Sbjct: 254 AGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYL-DFEDLGRLQYLSQVLKES 312
Query: 366 MRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLR 425
+RL+PP + +E+ ++ DG V T + + Y MGRM+ + D F P+R+
Sbjct: 313 LRLYPPAWGTFRLLEEETLI-DGVRVPGNTPLLFSTYVMGRMD-TYFEDPLTFNPDRF-- 368
Query: 426 NGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPRFAPGL 485
G P+ F Y F GHR C+G+ A +E+K ++++ R+ P Q RF
Sbjct: 369 -GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLV-PGQ--RFGLQE 424
Query: 486 TATVSGGLPVM 496
AT+ PV+
Sbjct: 425 QATLKPLDPVL 435
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 180/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 83 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 136
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 137 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 192
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 193 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 243
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 244 KDPETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 302
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P V S +A+ED +L + KG +
Sbjct: 303 DP---VPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVL 359
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 360 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 416
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 417 LGMMLKHFD 425
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 179/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 189
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 190 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 240
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 300 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVL 356
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+GK AL E
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGKQFALHEATLV 413
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 414 LGMMLKHFD 422
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 176/368 (47%), Gaps = 43/368 (11%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFFGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLASKLSAER 230
+ +++ + R + D+I C F++ + + P ++ A D A +R
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMN-KLQR 190
Query: 231 ALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASI 290
A P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 191 ANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGK 241
Query: 291 D-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIMK 341
D DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 242 DPETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 342 PNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHP 401
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 301 P---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLI 357
Query: 402 YAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAA 461
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 358 PQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVL 414
Query: 462 LAVVRKFN 469
+++ F+
Sbjct: 415 GMMLKHFD 422
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 179/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 189
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 190 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 240
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 300 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVL 356
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 413
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 414 LGMMLKHFD 422
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 179/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 81 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 134
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 135 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 190
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 191 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 241
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 242 KDPETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 300
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 301 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVL 357
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 358 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 414
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 415 LGMMLKHFD 423
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 179/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 83 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 136
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 137 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 192
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 193 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 243
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 244 KDPETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 302
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 303 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVL 359
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 360 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 416
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 417 LGMMLKHFD 425
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 179/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 189
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 190 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 240
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 300 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVL 356
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 413
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 414 LGMMLKHFD 422
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 176/368 (47%), Gaps = 43/368 (11%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLASKLSAER 230
+ +++ + R + D+I C F++ + + P ++ A D A +R
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMN-KLQR 190
Query: 231 ALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASI 290
A P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 191 ANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGK 241
Query: 291 D-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIMK 341
D DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 242 DPETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 342 PNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHP 401
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 301 P---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLI 357
Query: 402 YAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAA 461
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 358 PQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVL 414
Query: 462 LAVVRKFN 469
+++ F+
Sbjct: 415 GMMLKHFD 422
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 178/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 86 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 139
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 140 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 195
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
R P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 196 RTNPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLHG 246
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +V+FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 247 KDPETGEPLDDENIRYQIVTFLIAGHETT-SGLLSFTLYFLVKNPHVLQKAAEEAARVLV 305
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 306 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVL 362
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 363 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 419
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 420 LGMMLKHFD 428
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 184/387 (47%), Gaps = 47/387 (12%)
Query: 102 KTRFDNYPKGKPFSVILGDLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFEL 157
++RFD P + D G G+F SW ++ K ++ L SF+ + M +
Sbjct: 64 ESRFDKNLSQAP--KFVRDFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHA 117
Query: 158 VTAEIRFRLIPLLSSAANKVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP--- 212
+ +I +L+ + +++ + R + D+I C F++ + + P
Sbjct: 118 MMVDIAVQLVQKWERL--NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPF 173
Query: 213 VSKFATAFDLA-SKLSAERALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQR 271
++ A D A +KL RA P + KR Q + IK++N+L + +I R
Sbjct: 174 ITSMVRALDEAMNKLR--RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADR 223
Query: 272 QQMGFSKKNDLLSRFMASID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLL 322
+ G + +DLL+ + D DD+ +R +++FL AG + SGL SF ++L+
Sbjct: 224 KASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEAT-SGLLSFALYFLV 281
Query: 323 SQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQED 382
E++ A + ++ P + S++Q+++L Y+ + E++RL+P S +A+ED
Sbjct: 282 KNPHELQKAAEEAARVLVDP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 383 DILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQA 442
+L + KG + + R + IWG D EF+PER+ N + +PQ+ FK F
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGN 395
Query: 443 GHRVCLGKDMALVEMKSAALAVVRKFN 469
G R C+G+ AL E +++ F+
Sbjct: 396 GQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 176/368 (47%), Gaps = 43/368 (11%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLASKLSAER 230
+ +++ + R + D+I C F++ + + P ++ A D A +R
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMN-KLQR 190
Query: 231 ALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASI 290
A P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 191 ANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGK 241
Query: 291 D-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIMK 341
D DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 242 DPETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 342 PNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHP 401
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 301 P---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLI 357
Query: 402 YAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAA 461
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 358 PQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVL 414
Query: 462 LAVVRKFN 469
+++ F+
Sbjct: 415 GMMLKHFD 422
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 179/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 81 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 134
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 135 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 190
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 191 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 241
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 242 KDPETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 300
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 301 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVL 357
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 358 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 414
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 415 LGMMLKHFD 423
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 175/367 (47%), Gaps = 41/367 (11%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 81 DFAGDGLFT----SWTHEKNWCKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 134
Query: 176 KVNNILDLQDVFRRFSFDSICKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAERA 231
+ +++ + R + D+I F + P ++ A D A +KL +RA
Sbjct: 135 NADEHIEVPEDMTRLTLDTIGLSGFNYRFNSFYRDQPHPFITSMVRALDEAMNKL--QRA 192
Query: 232 LAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASID 291
P + KR Q + IK++N+L + +I R+ G + +DLL+ + D
Sbjct: 193 NPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKD 243
Query: 292 -------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIMKP 342
DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++ P
Sbjct: 244 PETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLVDP 302
Query: 343 NQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPY 402
+ S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 303 ---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIP 359
Query: 403 AMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAAL 462
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 360 QLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLG 416
Query: 463 AVVRKFN 469
+++ F+
Sbjct: 417 MMLKHFD 423
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 184/387 (47%), Gaps = 47/387 (12%)
Query: 102 KTRFDNYPKGKPFSVILGDLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFEL 157
++RFD P + DL G G+F SW ++ K ++ L SF+ + M +
Sbjct: 65 ESRFDKNLSQAP--KFVRDLAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHA 118
Query: 158 VTAEIRFRLIPLLSSAANKVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP--- 212
+ +I +L+ + +++ + R + D+I C F++ + + P
Sbjct: 119 MMVDIAVQLVQKWERL--NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPF 174
Query: 213 VSKFATAFDLA-SKLSAERALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQR 271
++ A D A +KL RA P + KR Q + IK++N+L + +I R
Sbjct: 175 ITSMVRALDEAMNKLR--RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADR 224
Query: 272 QQMGFSKKNDLLSRFMASID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLL 322
+ G + +DLL+ + D DD+ +R +++FL AG + SGL SF ++L+
Sbjct: 225 KASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEAT-SGLLSFALYFLV 282
Query: 323 SQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQED 382
E++ A + ++ P + S +Q+++L Y+ + E++RL+P S +A+ED
Sbjct: 283 KNPHELQKAAEEAARVLVDP---VPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 339
Query: 383 DILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQA 442
+L + KG + + R + +WG D EF+PER+ N + +PQ+ FK F
Sbjct: 340 TVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF-ENPSAIPQHAFK--PFGN 396
Query: 443 GHRVCLGKDMALVEMKSAALAVVRKFN 469
G R C+G+ AL E +++ F+
Sbjct: 397 GQRACIGQQFALHEATLVLGMMLKHFD 423
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 179/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 83 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 136
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 137 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 192
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 193 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 243
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 244 KDPETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 302
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 303 DP---VPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVL 359
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 360 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 416
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 417 LGMMLKHFD 425
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 176/368 (47%), Gaps = 43/368 (11%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLASKLSAER 230
+ +++ + R + D+I C F++ + + P ++ A D A +R
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMN-KLQR 190
Query: 231 ALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASI 290
A P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 191 ANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGK 241
Query: 291 D-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIMK 341
D DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 242 DPETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 342 PNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHP 401
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 301 P---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLI 357
Query: 402 YAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAA 461
+ R + IWG D EF+PER+ N + +PQ+ FK + G R C+G+ AL E
Sbjct: 358 PQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PYGNGQRACIGQQFALHEATLVL 414
Query: 462 LAVVRKFN 469
+++ F+
Sbjct: 415 GMMLKHFD 422
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 125/230 (54%), Gaps = 17/230 (7%)
Query: 249 SEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + IK++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLN 359
+FL+AG +T SGL SF ++L+ ++ A + ++ P + S++Q+++L Y+
Sbjct: 260 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLVDP---VPSYKQVKQLKYVG 315
Query: 360 AAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFK 419
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+
Sbjct: 316 MVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFR 375
Query: 420 PERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFN 469
PER+ N + +PQ+ FK F G R C+G+ AL E +++ F+
Sbjct: 376 PERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 178/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 189
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 190 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 240
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+ G +T SGL SF ++L+ ++ A + ++
Sbjct: 241 KDPETGEPLDDENIRYQIITFLICGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 300 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVL 356
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 413
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 414 LGMMLKHFD 422
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 177/368 (48%), Gaps = 43/368 (11%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP----VSKFATAFDLASKLSAE 229
+ +++ + R + D+I C F++ + + P +S ++ +KL +
Sbjct: 134 NADEYIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFIISMIRALDEVMNKL--Q 189
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL++ +
Sbjct: 190 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTQMLNG 240
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF-FWLLSQHSEVESAIRNESDKIMK 341
D DD + +++FL+AG +T SGL SF + L ++ V + E+ +++
Sbjct: 241 KDPETGEPLDDGNISYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKVAEEATRVLV 299
Query: 342 PNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHP 401
+ S++Q+++L Y+ + E++RL+P S +A+ED +L + KG V
Sbjct: 300 --DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLI 357
Query: 402 YAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAA 461
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 358 PQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVL 414
Query: 462 LAVVRKFN 469
+++ F+
Sbjct: 415 GMMLKHFD 422
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 125/230 (54%), Gaps = 17/230 (7%)
Query: 249 SEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + IK++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLN 359
+FL+AG +T SGL SF ++L+ ++ A + ++ P + S++Q+++L Y+
Sbjct: 260 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLVDP---VPSYKQVKQLKYVG 315
Query: 360 AAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFK 419
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+
Sbjct: 316 MVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFR 375
Query: 420 PERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFN 469
PER+ N + +PQ+ FK F G R C+G+ AL E +++ F+
Sbjct: 376 PERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 173/356 (48%), Gaps = 45/356 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 81 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 134
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 135 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 190
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 191 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 241
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 242 KDPETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 300
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 301 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVL 357
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVE 456
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C G+ AL E
Sbjct: 358 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACPGQQFALHE 410
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 178/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 189
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 190 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 240
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 300 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVL 356
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C G+ AL E
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACEGQQFALHEATLV 413
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 414 LGMMLKHFD 422
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 178/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 189
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 190 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 240
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+ G +T SGL SF ++L+ ++ A + ++
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIQGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 300 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVL 356
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 413
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 414 LGMMLKHFD 422
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 178/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 189
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 190 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 240
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+ G +T SGL SF ++L+ ++ A + ++
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIMGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 300 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVL 356
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 413
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 414 LGMMLKHFD 422
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 178/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 189
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 190 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 240
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+ G +T SGL SF ++L+ ++ A + ++
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIKGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 300 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVL 356
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 413
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 414 LGMMLKHFD 422
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 178/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 189
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 190 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 240
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+ G +T SGL SF ++L+ ++ A + ++
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIEGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 300 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVL 356
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 413
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 414 LGMMLKHFD 422
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 178/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 189
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 190 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 240
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+AG + SGL SF ++L+ ++ A + ++
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHEAT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 300 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVL 356
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 413
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 414 LGMMLKHFD 422
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 178/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 189
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 190 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 240
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+ G +T SGL SF ++L+ ++ A + ++
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIHGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 300 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVL 356
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 413
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 414 LGMMLKHFD 422
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 175/368 (47%), Gaps = 43/368 (11%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLASKLSAER 230
+ +++ + R + D+I C F++ + + P ++ A D A +R
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMN-KLQR 190
Query: 231 ALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASI 290
A P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 191 ANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGK 241
Query: 291 D-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIMK 341
D DD+ +R +++FL+AG + SGL SF ++L+ ++ A + ++
Sbjct: 242 DPETGEPLDDENIRYQIITFLIAGHENT-SGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 342 PNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHP 401
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 301 P---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLI 357
Query: 402 YAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAA 461
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 358 PQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVL 414
Query: 462 LAVVRKFN 469
+++ F+
Sbjct: 415 GMMLKHFD 422
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 117/217 (53%), Gaps = 12/217 (5%)
Query: 259 LVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY------LRDIVVSFLLAGRDTVA 312
L+ EL E +I RQQ S++ D L +A+ DD+ L+D ++ L AG +T+
Sbjct: 203 LLAEL-EKIIKARQQQPPSEE-DALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLT 260
Query: 313 SGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPV 372
S L+SF LL QHS++ +R E +K ++ +Q+L + E L+++ YL+ + E +RL PPV
Sbjct: 261 SALSSFCLLLGQHSDIRERVRQEQNK-LQLSQELTA-ETLKKMPYLDQVLQEVLRLIPPV 318
Query: 373 QFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQ 432
+ +D G KG V+Y + + PD +F PER+ +G+
Sbjct: 319 GGGFRELIQDCQF-QGFHFPKGWLVSYQ-ISQTHADPDLYPDPEKFDPERFTPDGSATHN 376
Query: 433 NPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFN 469
PF + F G R CLGK+ A +EMK A ++++F+
Sbjct: 377 PPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFD 413
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 176/368 (47%), Gaps = 43/368 (11%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLASKLSAER 230
+ +++ + R + D+I C F++ + + P ++ A D A +R
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMN-KLQR 190
Query: 231 ALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASI 290
A P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 191 ANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGK 241
Query: 291 D-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIMK 341
D DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 242 DPETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 342 PNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHP 401
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 301 P---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLI 357
Query: 402 YAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAA 461
+ R + IWG D EF+PER+ N + +PQ+ FK + G R C+G+ AL E
Sbjct: 358 PQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PWGNGQRACIGQQFALHEATLVL 414
Query: 462 LAVVRKFN 469
+++ F+
Sbjct: 415 GMMLKHFD 422
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 175/368 (47%), Gaps = 43/368 (11%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLASKLSAER 230
+ +++ + R + D+I C F++ + + P ++ A D A +R
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMN-KLQR 190
Query: 231 ALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASI 290
A P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 191 ANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGK 241
Query: 291 D-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIMK 341
D DD+ +R +++FL+AG + SGL SF ++L+ ++ A + ++
Sbjct: 242 DPETGEPLDDENIRYQIITFLIAGHEAT-SGLLSFALYFLVKNPHVLQKAAEEAARVLVD 300
Query: 342 PNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHP 401
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 301 P---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLI 357
Query: 402 YAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAA 461
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 358 PQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVL 414
Query: 462 LAVVRKFN 469
+++ F+
Sbjct: 415 GMMLKHFD 422
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 125/230 (54%), Gaps = 17/230 (7%)
Query: 249 SEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + IK++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLN 359
+FL+AG ++ SGL SF ++L+ ++ A + ++ P + S++Q+++L Y+
Sbjct: 260 TFLIAGHEST-SGLLSFALYFLVKNPHVLQKAAEEAARVLVDP---VPSYKQVKQLKYVG 315
Query: 360 AAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFK 419
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+
Sbjct: 316 MVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFR 375
Query: 420 PERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFN 469
PER+ N + +PQ+ FK F G R C+G+ AL E +++ F+
Sbjct: 376 PERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 178/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 189
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 190 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 240
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 300 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVL 356
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK G R C+G+ AL E
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PHGNGQRACIGQQFALHEATLV 413
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 414 LGMMLKHFD 422
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 125/230 (54%), Gaps = 17/230 (7%)
Query: 249 SEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + IK++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 202 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 260
Query: 302 SFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLN 359
+FL+AG ++ SGL SF ++L+ ++ A + ++ P + S++Q+++L Y+
Sbjct: 261 TFLIAGHEST-SGLLSFALYFLVKNPHVLQKAAEEAARVLVDP---VPSYKQVKQLKYVG 316
Query: 360 AAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFK 419
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+
Sbjct: 317 MVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFR 376
Query: 420 PERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFN 469
PER+ N + +PQ+ FK F G R C+G+ AL E +++ F+
Sbjct: 377 PERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 423
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 125/230 (54%), Gaps = 17/230 (7%)
Query: 249 SEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + IK++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLN 359
+FL+AG ++ SGL SF ++L+ ++ A + ++ P + S++Q+++L Y+
Sbjct: 260 TFLIAGHEST-SGLLSFALYFLVKNPHVLQKAAEEAARVLVDP---VPSYKQVKQLKYVG 315
Query: 360 AAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFK 419
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+
Sbjct: 316 MVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFR 375
Query: 420 PERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFN 469
PER+ N + +PQ+ FK F G R C+G+ AL E +++ F+
Sbjct: 376 PERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 179/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 189
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 190 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 240
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 241 KDPETGEPLDDENIRYQIITFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 300 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVL 356
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK P G R C+G+ AL E
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK-PAGN-GQRACIGQQFALHEATLV 413
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 414 LGMMLKHFD 422
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 178/369 (48%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 189
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 190 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 240
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++ L+AG +T SGL SF ++L+ ++ A + ++
Sbjct: 241 KDPETGEPLDDENIRYQIITELIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 300 DP---VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVL 356
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 413
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 414 LGMMLKHFD 422
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 182/386 (47%), Gaps = 45/386 (11%)
Query: 102 KTRFD-NYPKGKPFSVILGDLLGGGIFN--VDGNSWKFQRKIASVELGSFNFKMYAFELV 158
++RFD N + + F + D G G+ +WK R I L K Y +V
Sbjct: 65 ESRFDKNLSQARKF---VRDFAGDGLATSWTHEKNWKKARNILLPRLSQQAMKGYHAMMV 121
Query: 159 TAEIRFRLIPLLSSAANKVNN--ILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP-- 212
++ L ++N+ +++ + R + D+I C F++ ++ + P
Sbjct: 122 DIAVQ------LVQKWERLNSDEHIEVPEDMTRLTLDTIGLCGFNYRIN--SFYRDQPHP 173
Query: 213 -VSKFATAFD-LASKLSAERALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQ 270
++ A D + +KL +RA P + KR Q + IK++N+L + +I
Sbjct: 174 FITSMVRALDEVMNKL--QRANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIAD 223
Query: 271 RQQMGFSKKNDLLSRFMASID-------DDKYLRDIVVSFLLAGRDTVASGLTSFFWLLS 323
R+ G + +DLL+ + D DD+ +R +++FL+AG +T + LT + L
Sbjct: 224 RKASG-EQSDDLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLV 282
Query: 324 QHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDD 383
++ V E+ +++ + S++Q+++L Y+ + E++R++P S +A+ED
Sbjct: 283 KNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDT 340
Query: 384 ILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAG 443
+L + KG + + R + +WG D EF+PER+ N + +PQ+ FK F G
Sbjct: 341 MLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNG 397
Query: 444 HRVCLGKDMALVEMKSAALAVVRKFN 469
R C+G+ AL E +++ F+
Sbjct: 398 QRACIGQQFALHEATLVLGMMLKHFD 423
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 124/230 (53%), Gaps = 17/230 (7%)
Query: 249 SEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + IK++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLN 359
+FL+AG + SGL SF ++L+ ++ A + ++ P + S++Q+++L Y+
Sbjct: 260 TFLIAGHEAT-SGLLSFALYFLVKNPHVLQKAAEEAARVLVDP---VPSYKQVKQLKYVG 315
Query: 360 AAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFK 419
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+
Sbjct: 316 MVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFR 375
Query: 420 PERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFN 469
PER+ N + +PQ+ FK F G R C+G+ AL E +++ F+
Sbjct: 376 PERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 177/369 (47%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 80 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 133
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 189
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 190 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 240
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL AG + SGL SF ++L+ ++ A + ++
Sbjct: 241 KDPETGEPLDDENIRYQIITFLAAGHEAT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 299
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 300 DP---VPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVL 356
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 357 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 413
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 414 LGMMLKHFD 422
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 177/369 (47%), Gaps = 45/369 (12%)
Query: 120 DLLGGGIFNVDGNSWKFQR---KIASVELGSFNFK-MYAFELVTAEIRFRLIPLLSSAAN 175
D G G+F SW ++ K ++ L SF+ + M + + +I +L+
Sbjct: 81 DFAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-- 134
Query: 176 KVNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP---VSKFATAFDLA-SKLSAE 229
+ +++ + R + D+I C F++ + + P ++ A D A +KL +
Sbjct: 135 NADEHIEVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPFITSMVRALDEAMNKL--Q 190
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
RA P + KR Q + IK++N+L + +I R+ G + +DLL+ +
Sbjct: 191 RANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNG 241
Query: 290 ID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLLSQHSEVESAIRNESDKIM 340
D DD+ +R +++FL AG + SGL SF ++L+ ++ A + ++
Sbjct: 242 KDPETGEPLDDENIRYQIITFLAAGHEAT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV 300
Query: 341 KPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYH 400
P + S++Q+++L Y+ + E++RL+P S +A+ED +L + KG +
Sbjct: 301 DP---VPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVL 357
Query: 401 PYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSA 460
+ R + IWG D EF+PER+ N + +PQ+ FK F G R C+G+ AL E
Sbjct: 358 IPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLV 414
Query: 461 ALAVVRKFN 469
+++ F+
Sbjct: 415 LGMMLKHFD 423
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 186/405 (45%), Gaps = 32/405 (7%)
Query: 92 SNPENVEYIL-KTRFDNYPKGKPFSVILGDLLGGGIFNVDGNSWKFQRKIASVELGSFNF 150
++P+ ++ +L K + + +PF + + I + WK R + S S
Sbjct: 64 TDPDMIKTVLVKECYSVFTNRRPFGPV--GFMKSAISIAEDEEWKRLRSLLSPTFTSGKL 121
Query: 151 KMYAFELVTAEIRFRLIPLLSSAANKVNNILDLQDVFRRFSFDSICKFSFGLDPECLMLN 210
K + A+ L+ L A + + L+DVF +S D I SFG++ + L N
Sbjct: 122 KEMV--PIIAQYGDVLVRNLRREA-ETGKPVTLKDVFGAYSMDVITSTSFGVNIDSL--N 176
Query: 211 LPVSKFAT------AFDLASKLSAERALAPSPIVWKIKRLLNIGSEKQ-----LKGAIKL 259
P F FD ++ P + I +LNI + L+ ++K
Sbjct: 177 NPQDPFVENTKKLLRFDFLDPFFL--SITVFPFLIPILEVLNICVFPREVTNFLRKSVKR 234
Query: 260 VNE--LAETMIHQRQ--QMGFSKKNDLLSRFMASIDDDKYLRDIVVSFLLAGRDTVASGL 315
+ E L +T H+ Q+ +N + ++ D + + ++ F+ AG +T +S L
Sbjct: 235 MKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSII-FIFAGYETTSSVL 293
Query: 316 TSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFD 375
+ + L+ H +V+ ++ E D ++ PN+ +++ + ++ YL+ V E++RLFP +
Sbjct: 294 SFIMYELATHPDVQQKLQEEIDAVL-PNKAPPTYDTVLQMEYLDMVVNETLRLFP-IAMR 351
Query: 376 SKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERW-LRNGTFVPQNP 434
+ + D+ +G F+ KG V YA+ R + W + +F PER+ +N + +P
Sbjct: 352 LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWT-EPEKFLPERFSKKNKDNI--DP 408
Query: 435 FKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAP 479
+ Y F +G R C+G AL+ MK A + V++ F+ + Q P
Sbjct: 409 YIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIP 453
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 153/315 (48%), Gaps = 26/315 (8%)
Query: 181 LDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFAT------AFDLASKLSAERALAP 234
+ L+DVF +S D I SFG++ + L N P F FD ++
Sbjct: 148 VTLKDVFGAYSMDVITSTSFGVNIDSL--NNPQDPFVENTKKLLRFDFLDPFFL--SITV 203
Query: 235 SPIVWKIKRLLNIGSEKQ-----LKGAIKLVNE--LAETMIHQRQ--QMGFSKKNDLLSR 285
P + I +LNI + L+ ++K + E L +T H+ Q+ +N +
Sbjct: 204 FPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETE 263
Query: 286 FMASIDDDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQD 345
++ D + + ++ F+ AG +T +S L+ + L+ H +V+ ++ E D ++ PN+
Sbjct: 264 SHKALSDLELVAQSII-FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVL-PNKA 321
Query: 346 LVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMG 405
+++ + ++ YL+ V E++RLFP + + + D+ +G F+ KG V YA+
Sbjct: 322 PPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALH 380
Query: 406 RMERIWGPDCSEFKPERW-LRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAV 464
R + W + +F PER+ +N + +P+ Y F +G R C+G AL+ MK A + V
Sbjct: 381 RDPKYWT-EPEKFLPERFSKKNKDNI--DPYIYTPFGSGPRNCIGMRFALMNMKLALIRV 437
Query: 465 VRKFNIRVSDPNQAP 479
++ F+ + Q P
Sbjct: 438 LQNFSFKPCKETQIP 452
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 153/315 (48%), Gaps = 26/315 (8%)
Query: 181 LDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFAT------AFDLASKLSAERALAP 234
+ L+DVF +S D I SFG++ + L N P F FD ++
Sbjct: 150 VTLKDVFGAYSMDVITSTSFGVNIDSL--NNPQDPFVENTKKLLRFDFLDPFFL--SITV 205
Query: 235 SPIVWKIKRLLNIGSEKQ-----LKGAIKLVNE--LAETMIHQRQ--QMGFSKKNDLLSR 285
P + I +LNI + L+ ++K + E L +T H+ Q+ +N +
Sbjct: 206 FPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETE 265
Query: 286 FMASIDDDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQD 345
++ D + + ++ F+ AG +T +S L+ + L+ H +V+ ++ E D ++ PN+
Sbjct: 266 SHKALSDLELVAQSII-FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVL-PNKA 323
Query: 346 LVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMG 405
+++ + ++ YL+ V E++RLFP + + + D+ +G F+ KG V YA+
Sbjct: 324 PPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALH 382
Query: 406 RMERIWGPDCSEFKPERW-LRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAV 464
R + W + +F PER+ +N + +P+ Y F +G R C+G AL+ MK A + V
Sbjct: 383 RDPKYWT-EPEKFLPERFSKKNKDNI--DPYIYTPFGSGPRNCIGMRFALMNMKLALIRV 439
Query: 465 VRKFNIRVSDPNQAP 479
++ F+ + Q P
Sbjct: 440 LQNFSFKPCKETQIP 454
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 160/366 (43%), Gaps = 53/366 (14%)
Query: 124 GGIFNVDGNSWKFQRKIASVEL-GSFNFKMYAFELVTAEIRFRLIPLLSSAANKVNNILD 182
G IFN + WK R L G +M V AE + L N+ + +D
Sbjct: 131 GIIFNNNPELWKTTRPFFMKALSGPGLVRMVT---VCAESLKTHLDRLEEVTNE-SGYVD 186
Query: 183 LQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLSAERALAPSP-----I 237
+ + RR D+ L L +P+ + A + A +AL P I
Sbjct: 187 VLTLLRRVMLDT---------SNTLFLRIPLDESAIVVKIQGYFDAWQALLIKPDIFFKI 237
Query: 238 VWKIKRLLNIGSEKQLKGAIKLV-----------NELAETMIHQRQQMGFSKKNDLLSRF 286
W K+ S K LK AI+++ +L E M + + K+ DL
Sbjct: 238 SWLYKKYEK--SVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKRGDLTR-- 293
Query: 287 MASIDDDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDL 346
+ + ++ L+A DT++ L +L+++H VE AI E ++
Sbjct: 294 -------ENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD-- 344
Query: 347 VSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGR 406
+ + +++L + +YESMR P V + A EDD++ DG V+KGT + + +GR
Sbjct: 345 IKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVI-DGYPVKKGTNIILN---IGR 400
Query: 407 MERI-WGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVV 465
M R+ + P +EF E + +N + PF + G R C GK +A+V MK+ + ++
Sbjct: 401 MHRLEFFPKPNEFTLENFAKNVPYRYFQPFGF-----GPRGCAGKYIAMVMMKAILVTLL 455
Query: 466 RKFNIR 471
R+F+++
Sbjct: 456 RRFHVK 461
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 158/365 (43%), Gaps = 36/365 (9%)
Query: 125 GIFNVDGNSWK-----FQRKIAS-VELGSFNFKMYAFELVTAEIRFRLIPLLSSAANKVN 178
G+ ++G W+ FQ+K+ VE+ + K+ E+ + + ++
Sbjct: 114 GLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKI-------NEVLADFLERMDELCDERG 166
Query: 179 NILDLQDVFRRFSFDSIC----KFSFGL-----DPECLMLNLPVSKFATAFDLASKLSAE 229
I DL ++SF+SIC + FGL + E L + + F E
Sbjct: 167 RIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTPVE 226
Query: 230 RALAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMAS 289
+ VW+ L K +K I N L QQ G D+ + S
Sbjct: 227 LHKRLNTKVWQAHTLAWDTIFKSVKPCID--NRLQ----RYSQQPGADFLCDIYQQDHLS 280
Query: 290 IDDDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSF 349
K L V LA +T A+ L + LS++ + + + E ++ NQ +
Sbjct: 281 ---KKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRA- 336
Query: 350 EQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMER 409
E LR + YL A + ESMRL P V F ++ + +L + KGT +T + +G E
Sbjct: 337 EDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALP-KGTVLTLNTQVLGSSED 395
Query: 410 IWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFN 469
+ D +F+PERWL+ + NPF + F G R+C+G+ +A +++ A +++K++
Sbjct: 396 NFE-DSHKFRPERWLQKEKKI--NPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYD 452
Query: 470 IRVSD 474
I +D
Sbjct: 453 IVATD 457
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 123/251 (49%), Gaps = 19/251 (7%)
Query: 245 LNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDD------DKYLRD 298
L + + ++ A+ ++ L + +I +R+ G K +DLL+ + + DD ++ + D
Sbjct: 208 LPLPANRRFNDALADLHLLVDEIIAERRASG-QKPDDLLTALLEAKDDNGDPIGEQEIHD 266
Query: 299 IVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYL 358
VV+ L G +T+AS + L+ H E IR+E + + V+FE +R+L +
Sbjct: 267 QVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRP--VAFEDVRKLRHT 324
Query: 359 NAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEF 418
+ E+MRL P V ++ A + L G + G + Y PYA+ R + + D EF
Sbjct: 325 GNVIVEAMRLRPAVWVLTRRAVAESEL-GGYRIPAGADIIYSPYAIQRDPKSYD-DNLEF 382
Query: 419 KPERWL-RNGTFVPQNPFKYPVFQAGHRVCLGK--DMALVEMKSAALAVVRKFNIRVSDP 475
P+RWL VP+ K F AG R C MA + + +AALA +F +V+
Sbjct: 383 DPDRWLPERAANVPKYAMK--PFSAGKRKCPSDHFSMAQLTLITAALATKYRFE-QVAGS 439
Query: 476 NQAPRFAPGLT 486
N A R G+T
Sbjct: 440 NDAVRV--GIT 448
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 21/243 (8%)
Query: 248 GSEKQLKGAIKLVNE-LAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY----------L 296
GS +++ + V E ++E + Q + + DL + ++ +K+ +
Sbjct: 209 GSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGI 268
Query: 297 RDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELH 356
V AG +T ++ L +L ++ E+E + E D+++ P++ + + + +E+
Sbjct: 269 TVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSR-IPAIKDRQEMP 327
Query: 357 YLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRV--TYHPYAMGRMERIWGPD 414
Y++A V+E R V + D + G + KGT V T E PD
Sbjct: 328 YMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQE---FPD 384
Query: 415 CSEFKPERWL-RNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIR-V 472
+FKPE +L NG F + FK F G RVC G+ +A +E+ A+++ FN++ +
Sbjct: 385 PEKFKPEHFLNENGKFKYSDYFK--PFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPL 442
Query: 473 SDP 475
DP
Sbjct: 443 VDP 445
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 300 VVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLN 359
V+ L+AG +TVAS LT F LLS + + + + + Q
Sbjct: 215 AVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAALAAFQ--------------- 259
Query: 360 AAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFK 419
E++RL+PP ++ + +L + +GT + PY +R++ P+ F+
Sbjct: 260 ----EALRLYPPAWILTRRLERPLLLGEDRLP-QGTTLVLSPYVT---QRLYFPEGEAFQ 311
Query: 420 PERWL-RNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQA 478
PER+L GT P +Y F G R+CLG+D AL+E A R+F + DP
Sbjct: 312 PERFLAERGT--PSG--RYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRL---DPLPF 364
Query: 479 PRFAPGLTATVSGGLPVMVQE 499
PR +T GGLP +E
Sbjct: 365 PRVLAQVTLRPEGGLPARPRE 385
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 300 VVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLN 359
V+ L+AG +TVAS LT F LLS + + + + + Q
Sbjct: 215 AVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAALAAFQ--------------- 259
Query: 360 AAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFK 419
E++RL+PP ++ + +L + GT + PY +R+ PD F+
Sbjct: 260 ----EALRLYPPAWILTRRLERPLLLGEDRLP-PGTTLVLSPYVT---QRLHFPDGEAFR 311
Query: 420 PERWLRN-GTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQA 478
PER+L GT P +Y F G R+CLG+D AL+E A R+F + DP
Sbjct: 312 PERFLEERGT--PSG--RYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRL---DPLPF 364
Query: 479 PRFAPGLTATVSGGLPVMVQE 499
PR +T GGLP +E
Sbjct: 365 PRVLAQVTLRPEGGLPARPRE 385
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 118/246 (47%), Gaps = 10/246 (4%)
Query: 235 SPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFM-ASIDDD 293
S W + L + S ++ A + + ++ I +R+Q K +D+L + A+ D
Sbjct: 187 SHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQ-EKIDDILQTLLDATYKDG 245
Query: 294 KYLRD-----IVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVS 348
+ L D +++ LLAG+ T ++ + L++ ++ E + N ++
Sbjct: 246 RPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLT 305
Query: 349 FEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRME 408
++QL++L+ L+ + E++RL PP+ + A+ + G + G +V P R++
Sbjct: 306 YDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVA-GYTIPPGHQVCVSPTVNQRLK 364
Query: 409 RIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKF 468
W + +F P+R+L++ + F Y F AG C+G++ A V++K+ ++R +
Sbjct: 365 DSWV-ERLDFNPDRYLQDNPASGEK-FAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLY 422
Query: 469 NIRVSD 474
+ D
Sbjct: 423 EFDLID 428
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 6/202 (2%)
Query: 300 VVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLN 359
V ++AG +T + L ++ + ++ ++ E D IM PN S++ ++ Y
Sbjct: 278 VGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGK-PSWDDKCKMPYTE 336
Query: 360 AAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFK 419
A ++E +R V A +D + G + KGT V + Y++ E+ W D F
Sbjct: 337 AVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWR-DPEVFH 395
Query: 420 PERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQ-A 478
PER+L + + + P F G R CLG+ +A +EM A++++F++ P++
Sbjct: 396 PERFLDSSGYFAKKEALVP-FSLGRRHCLGEHLARMEMFLFFTALLQRFHLHF--PHELV 452
Query: 479 PRFAPGLTATVSGGLPVMVQER 500
P P L T+ ++ ER
Sbjct: 453 PDLKPRLGMTLQPQPYLICAER 474
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 6/202 (2%)
Query: 300 VVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLN 359
V ++AG +T + L ++ + ++ ++ E D IM PN S++ ++ Y
Sbjct: 278 VGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGK-PSWDDKCKMPYTE 336
Query: 360 AAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFK 419
A ++E +R V A +D + G + KGT V + Y++ E+ W D F
Sbjct: 337 AVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWR-DPEVFH 395
Query: 420 PERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQ-A 478
PER+L + + + P F G R CLG+ +A +EM A++++F++ P++
Sbjct: 396 PERFLDSSGYFAKKEALVP-FSLGRRHCLGEHLARMEMFLFFTALLQRFHLHF--PHELV 452
Query: 479 PRFAPGLTATVSGGLPVMVQER 500
P P L T+ ++ ER
Sbjct: 453 PDLKPRLGMTLQPQPYLICAER 474
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 40/240 (16%)
Query: 263 LAETMIHQRQQMGFSKKNDLLSRFMASIDDDK-------YLRDIVVSFL---LAGRDTVA 312
+A+ + H ++ + + D + F+ + +++ YL+++V++ L AG +TV+
Sbjct: 226 IAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVS 285
Query: 313 SGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMR----- 367
+ L F LL +H EVE+ + E D+++ N+ FE ++ Y+ A ++E R
Sbjct: 286 TTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKFEDRAKMPYMEAVIHEIQRFGDVI 344
Query: 368 ---LFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAM-GRMER--IWGPDCSEFKPE 421
L V+ D+KF D LP GT V Y M G + R + + +F P+
Sbjct: 345 PMGLARRVKKDTKF--RDFFLPKGTEV----------YPMLGSVLRDPSFFSNPQDFNPQ 392
Query: 422 RWL-RNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPR 480
+L G F + F F G R C G+ +A +E+ V++ F ++ S Q+P+
Sbjct: 393 HFLNEKGQFKKSDAFV--PFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSS---QSPK 447
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 119/249 (47%), Gaps = 37/249 (14%)
Query: 251 KQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDK-------YLRDIVVSF 303
K+L+G L + +A+ + H ++ + + D + F+ + +++ YL+++V++
Sbjct: 217 KELQG---LEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTT 273
Query: 304 L---LAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
L AG +TV++ L F LL +H EVE+ + E D+++ N+ FE ++ Y A
Sbjct: 274 LNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKFEDRAKMPYTEA 332
Query: 361 AVYESMR--------LFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWG 412
++E R L V D+KF D LP KGT V ++ R R +
Sbjct: 333 VIHEIQRFGDMLPMGLAHRVNKDTKF--RDFFLP------KGTEVFPMLGSVLRDPRFFS 384
Query: 413 PDCSEFKPERWL-RNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIR 471
+ +F P+ +L + G F + F F G R C G+ +A +E+ +++ N R
Sbjct: 385 -NPRDFNPQHFLDKKGQFKKSDAFV--PFSIGKRYCFGEGLARMELFLFFTTIMQ--NFR 439
Query: 472 VSDPNQAPR 480
P Q+P+
Sbjct: 440 FKSP-QSPK 447
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 40/240 (16%)
Query: 263 LAETMIHQRQQMGFSKKNDLLSRFMASIDDDK-------YLRDIVVSFL---LAGRDTVA 312
+A+ + H ++ + + D + F+ + +++ YL+++V++ L + G +TV+
Sbjct: 226 IAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVS 285
Query: 313 SGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYE-------- 364
+ L F LL +H EVE+ + E D+++ N+ FE ++ Y+ A ++E
Sbjct: 286 TTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKFEDRAKMPYMEAVIHEIQRFGDVI 344
Query: 365 SMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAM-GRMER--IWGPDCSEFKPE 421
M L V+ D+KF D LP GT V Y M G + R + + +F P+
Sbjct: 345 PMSLARRVKKDTKF--RDFFLPKGTEV----------YPMLGSVLRDPSFFSNPQDFNPQ 392
Query: 422 RWL-RNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPR 480
+L G F + F P F G R C G+ +A +E+ V++ F ++ S Q+P+
Sbjct: 393 HFLNEKGQFKKSDAF-VP-FSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSS---QSPK 447
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 40/240 (16%)
Query: 263 LAETMIHQRQQMGFSKKNDLLSRFMASIDDDK-------YLRDIVVSFL---LAGRDTVA 312
+A+ + H ++ + + D + F+ + +++ YL+++V++ L + G +TV+
Sbjct: 226 IAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVS 285
Query: 313 SGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYE-------- 364
+ L F LL +H EVE+ + E D+++ N+ FE ++ Y+ A ++E
Sbjct: 286 TTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKFEDRAKMPYMEAVIHEIQRFGDVI 344
Query: 365 SMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAM-GRMER--IWGPDCSEFKPE 421
M L V+ D+KF D LP GT V Y M G + R + + +F P+
Sbjct: 345 PMSLARRVKKDTKF--RDFFLPKGTEV----------YPMLGSVLRDPSFFSNPQDFNPQ 392
Query: 422 RWL-RNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPR 480
+L G F + F P F G R C G+ +A +E+ V++ F ++ S Q+P+
Sbjct: 393 HFLNEKGQFKKSDAF-VP-FSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSS---QSPK 447
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 114/240 (47%), Gaps = 40/240 (16%)
Query: 263 LAETMIHQRQQMGFSKKNDLLSRFMASIDDDK-------YLRDIVVSFL---LAGRDTVA 312
+A+ + H ++ + + D + F+ + +++ YL+++V++ L + G +TV+
Sbjct: 226 IAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVS 285
Query: 313 SGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYE-------- 364
+ L F LL +H EVE+ + E D+++ N+ FE ++ Y+ A ++E
Sbjct: 286 TTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKFEDRAKMPYMEAVIHEIQRFGDVI 344
Query: 365 SMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAM-GRMER--IWGPDCSEFKPE 421
M L V+ D+KF D LP GT V Y M G + R + + +F P+
Sbjct: 345 PMSLARRVKKDTKF--RDFFLPKGTEV----------YPMLGSVLRDPSFFSNPQDFNPQ 392
Query: 422 RWL-RNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPR 480
+L G F + F F G R C G+ +A +E+ V++ F ++ S Q+P+
Sbjct: 393 HFLNEKGQFKKSDAFV--PFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSS---QSPK 447
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 40/240 (16%)
Query: 263 LAETMIHQRQQMGFSKKNDLLSRFMASIDDDK-------YLRDIVVSFL---LAGRDTVA 312
+A+ + H ++ + + D + F+ + +++ YL+++V++ L + G +TV+
Sbjct: 226 IAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVS 285
Query: 313 SGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYE-------- 364
+ L F LL +H EVE+ + E D+++ N+ FE ++ Y+ A ++E
Sbjct: 286 TTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKFEDRAKMPYMEAVIHEIQRFGDVI 344
Query: 365 SMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAM-GRMER--IWGPDCSEFKPE 421
M L V+ D+KF D LP GT V Y M G + R + + +F P+
Sbjct: 345 PMSLARRVKKDTKF--RDFFLPKGTEV----------YPMLGSVLRDPSFFSNPQDFNPQ 392
Query: 422 RWL-RNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPR 480
+L G F + F P F G R C G+ +A +E+ V++ F ++ S Q+P+
Sbjct: 393 HFLNEKGQFKKSDAF-VP-FSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSS---QSPK 447
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 22/259 (8%)
Query: 234 PSPIVWKIKRLL---NIGSEKQLKGAIK--LVNELAETMIHQRQQMGFSKKNDLLSRFMA 288
P+P +W++K+ + + EKQL+ + + + + + Q +G + + + +
Sbjct: 218 PNPGLWRLKQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLL- 276
Query: 289 SIDDDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDL-- 346
+ ++ VV + G +T AS L+ L H E++ ++ E D+ + P
Sbjct: 277 ----EGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSR 332
Query: 347 VSFEQLRELHYLNAAVYESMRLFP--PVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAM 404
V+++ L LNA + E +RL P P+ + + I G + +G V +
Sbjct: 333 VTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIF--GYDIPEGMVVIPNLQGA 390
Query: 405 GRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAV 464
E +W EF+P+R+L G NP F G RVCLG+ +A +E+ +
Sbjct: 391 HLDETVWE-QPHEFRPDRFLEPGA----NPSAL-AFGCGARVCLGESLARLELFVVLARL 444
Query: 465 VRKFNIRVSDPNQAPRFAP 483
++ F + P P
Sbjct: 445 LQAFTLLPPPVGALPSLQP 463
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 158/398 (39%), Gaps = 58/398 (14%)
Query: 113 PFSVILG-DLLGGGIFNVD-GNSWKFQRKIASVELGSFNFKMYAFEL-VTAEIR------ 163
P + ILG G+F G +W+ QR+ + L + + E VT E
Sbjct: 83 PITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAF 142
Query: 164 -------FRLIPLLSSAANKVNNILDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKF 216
FR LL A V+N++ RRF +D DP L L
Sbjct: 143 ANHSGRPFRPNGLLDKA---VSNVIASLTCGRRFEYD---------DPRFLRL------- 183
Query: 217 ATAFDLASKLSAERALAPSPIVWKIKRLLNIGS--EKQLKGAIKLVNELAETMIHQRQQM 274
DLA + E + ++ + LL+I + K L+ + +L E + R
Sbjct: 184 ---LDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTW 240
Query: 275 GFSKK-NDLLSRFMASID----------DDKYLRDIVVSFLLAGRDTVASGLTSFFWLLS 323
++ DL F+A ++ +D+ LR +V AG T ++ L L+
Sbjct: 241 DPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMI 300
Query: 324 QHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDD 383
H +V+ ++ E D ++ + +Q + Y A ++E R V D
Sbjct: 301 LHPDVQRRVQQEIDDVIGQVRRPEMGDQA-HMPYTTAVIHEVQRFGDIVPLGVTHMTSRD 359
Query: 384 ILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWL-RNGTFVPQNPFKYPVFQA 442
I G + KGT + + ++ + E +W F PE +L G FV P + F A
Sbjct: 360 IEVQGFRIPKGTTLITNLSSVLKDEAVWEKPF-RFHPEHFLDAQGHFV--KPEAFLPFSA 416
Query: 443 GHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPR 480
G R CLG+ +A +E+ ++++ F+ V P PR
Sbjct: 417 GRRACLGEPLARMELFLFFTSLLQHFSFSV--PTGQPR 452
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 91/183 (49%), Gaps = 5/183 (2%)
Query: 299 IVVSFLLAGRDTVASGLTSFFWL-LSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHY 357
+ +S + AG T +SG S+ + L +H + +A+ +E D++ + VSF LR++
Sbjct: 249 MFISMMFAGHHT-SSGTASWTLIELMRHRDAYAAVIDELDELYGDGRS-VSFHALRQIPQ 306
Query: 358 LNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSE 417
L + E++RL PP+ + A+ + G + +G V P R+ + PD +
Sbjct: 307 LENVLKETLRLHPPLIILMRVAK-GEFEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHD 364
Query: 418 FKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQ 477
F P R+ + N + + F AG C+G A++++K+ ++R++ ++ P +
Sbjct: 365 FVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPE 424
Query: 478 APR 480
+ R
Sbjct: 425 SYR 427
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 91/183 (49%), Gaps = 5/183 (2%)
Query: 299 IVVSFLLAGRDTVASGLTSFFWL-LSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHY 357
+ +S + AG T +SG S+ + L +H + +A+ +E D++ + VSF LR++
Sbjct: 249 MFISMMFAGHHT-SSGTASWTLIELMRHRDAYAAVIDELDELYGDGRS-VSFHALRQIPQ 306
Query: 358 LNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSE 417
L + E++RL PP+ + A+ + G + +G V P R+ + PD +
Sbjct: 307 LENVLKETLRLHPPLIILMRVAK-GEFEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHD 364
Query: 418 FKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQ 477
F P R+ + N + + F AG C+G A++++K+ ++R++ ++ P +
Sbjct: 365 FVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPE 424
Query: 478 APR 480
+ R
Sbjct: 425 SYR 427
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 91/183 (49%), Gaps = 5/183 (2%)
Query: 299 IVVSFLLAGRDTVASGLTSFFWL-LSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHY 357
+ +S + AG T +SG S+ + L +H + +A+ +E D++ + VSF LR++
Sbjct: 249 MFISMMFAGHHT-SSGTASWTLIELMRHRDAYAAVIDELDELYGDGRS-VSFHALRQIPQ 306
Query: 358 LNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSE 417
L + E++RL PP+ + A+ + G + +G V P R+ + PD +
Sbjct: 307 LENVLKETLRLHPPLIILMRVAK-GEFEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHD 364
Query: 418 FKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQ 477
F P R+ + N + + F AG C+G A++++K+ ++R++ ++ P +
Sbjct: 365 FVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPE 424
Query: 478 APR 480
+ R
Sbjct: 425 SYR 427
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 91/183 (49%), Gaps = 5/183 (2%)
Query: 299 IVVSFLLAGRDTVASGLTSFFWL-LSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHY 357
+ +S + AG T +SG S+ + L +H + +A+ +E D++ + VSF LR++
Sbjct: 249 MFISMMFAGHHT-SSGTASWTLIELMRHRDAYAAVIDELDELYGDGRS-VSFHALRQIPQ 306
Query: 358 LNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSE 417
L + E++RL PP+ + A+ + G + +G V P R+ + PD +
Sbjct: 307 LENVLKETLRLHPPLIILMRVAK-GEFEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHD 364
Query: 418 FKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQ 477
F P R+ + N + + F AG C+G A++++K+ ++R++ ++ P +
Sbjct: 365 FVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPE 424
Query: 478 APR 480
+ R
Sbjct: 425 SYR 427
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 105/236 (44%), Gaps = 14/236 (5%)
Query: 251 KQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY----------LRDIV 300
K LK + + + E + ++ M + D + F+ ++ +K+ L +
Sbjct: 215 KLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTA 274
Query: 301 VSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
V AG +T ++ L LL +H EV + ++ E ++++ N+ + + Y +A
Sbjct: 275 VDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRS-PCMQDRSHMPYTDA 333
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKP 420
V+E R + A DI + KGT + ++ + + P+ F P
Sbjct: 334 VVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEF-PNPEMFDP 392
Query: 421 ERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIR-VSDP 475
+L G ++ + P F AG R+C+G+ +A +E+ ++++ FN++ + DP
Sbjct: 393 HHFLDEGGNFKKSKYFMP-FSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDP 447
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 105/236 (44%), Gaps = 14/236 (5%)
Query: 251 KQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY----------LRDIV 300
K LK + + + E + ++ M + D + F+ ++ +K+ L +
Sbjct: 213 KLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTA 272
Query: 301 VSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
V AG +T ++ L LL +H EV + ++ E ++++ N+ + + Y +A
Sbjct: 273 VDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRS-PCMQDRSHMPYTDA 331
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKP 420
V+E R + A DI + KGT + ++ + + P+ F P
Sbjct: 332 VVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEF-PNPEMFDP 390
Query: 421 ERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIR-VSDP 475
+L G ++ + P F AG R+C+G+ +A +E+ ++++ FN++ + DP
Sbjct: 391 HHFLDEGGNFKKSKYFMP-FSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDP 445
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 156/402 (38%), Gaps = 66/402 (16%)
Query: 113 PFSVILG-DLLGGGIFNVD-GNSWKFQRKIASVELGSFNFKMYAFEL-VTAEIR------ 163
P + ILG G+F G +W+ QR+ + L + + E VT E
Sbjct: 83 PITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAF 142
Query: 164 -------FRLIPLLSSAANKVNNILDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKF 216
FR LL A V+N++ RRF +D DP L L
Sbjct: 143 ANHSGRPFRPNGLLDKA---VSNVIASLTCGRRFEYD---------DPRFLRL------- 183
Query: 217 ATAFDLASKLSAERA------LAPSPIVWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQ 270
DLA + E + L P+ I L + K L+ + +L E +
Sbjct: 184 ---LDLAQEGLKEESGFLREVLNAVPVDRHIPAL----AGKVLRFQKAFLTQLDELLTEH 236
Query: 271 RQQMGFSKK-NDLLSRFMASID----------DDKYLRDIVVSFLLAGRDTVASGLTSFF 319
R ++ DL F+A ++ +D+ LR +V AG T ++ L
Sbjct: 237 RMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGL 296
Query: 320 WLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFA 379
L+ H +V+ ++ E D ++ + +Q + Y A ++E R V
Sbjct: 297 LLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQA-HMPYTTAVIHEVQRFGDIVPLGMTHM 355
Query: 380 QEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWL-RNGTFVPQNPFKYP 438
DI G + KGT + + ++ + E +W F PE +L G FV P +
Sbjct: 356 TSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPF-RFHPEHFLDAQGHFV--KPEAFL 412
Query: 439 VFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVSDPNQAPR 480
F AG R CLG+ +A +E+ ++++ F+ V P PR
Sbjct: 413 PFSAGRRACLGEPLARMELFLFFTSLLQHFSFSV--PTGQPR 452
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 139/348 (39%), Gaps = 46/348 (13%)
Query: 156 ELVTAEIRFRLIPLLSSAANKVNNIL--------------DLQDVFRRFSFDSICKFSFG 201
E++ E +PLL + + ++L D+ D RF+F+SI FG
Sbjct: 114 EVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFG 173
Query: 202 LDPECL--MLNLPVSKFATAFDLASKLSAERALAPSPIVWKIKRLLNIGSEKQLKGAIKL 259
L ++N +F A S P + RL + K A +
Sbjct: 174 ERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLF----RLFRTKTWKDHVAAWDV 229
Query: 260 VNELAETMIH----QRQQMGFSKKND---LLSRFMASIDDDKYLRDI---VVSFLLAGRD 309
+ A+ + +Q G S +D +L R + D DI V L G D
Sbjct: 230 IFSKADIYTQNFYWELRQKG-SVHHDYRGILYRLLG--DSKMSFEDIKANVTEMLAGGVD 286
Query: 310 TVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQ-DLVSFEQLRELHYLNAAVYESMRL 368
T + L + ++++ +V+ +R E Q D+ + QL L L A++ E++RL
Sbjct: 287 TTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPL--LKASIKETLRL 344
Query: 369 FPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWL---R 425
P ++ D +L D K T V YA+GR E + D F P RWL +
Sbjct: 345 HPISVTLQRYLVNDLVLRDYMIPAK-TLVQVAIYALGR-EPTFFFDPENFDPTRWLSKDK 402
Query: 426 NGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVS 473
N T+ F+ F G R CLG+ +A +EM + ++ F + +
Sbjct: 403 NITY-----FRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQ 445
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 139/348 (39%), Gaps = 46/348 (13%)
Query: 156 ELVTAEIRFRLIPLLSSAANKVNNIL--------------DLQDVFRRFSFDSICKFSFG 201
E++ E +PLL + + ++L D+ D RF+F+SI FG
Sbjct: 117 EVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFG 176
Query: 202 LDPECL--MLNLPVSKFATAFDLASKLSAERALAPSPIVWKIKRLLNIGSEKQLKGAIKL 259
L ++N +F A S P + RL + K A +
Sbjct: 177 ERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLF----RLFRTKTWKDHVAAWDV 232
Query: 260 VNELAETMIH----QRQQMGFSKKND---LLSRFMASIDDDKYLRDI---VVSFLLAGRD 309
+ A+ + +Q G S +D +L R + D DI V L G D
Sbjct: 233 IFSKADIYTQNFYWELRQKG-SVHHDYRGILYRLLG--DSKMSFEDIKANVTEMLAGGVD 289
Query: 310 TVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQ-DLVSFEQLRELHYLNAAVYESMRL 368
T + L + ++++ +V+ +R E Q D+ + QL L L A++ E++RL
Sbjct: 290 TTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPL--LKASIKETLRL 347
Query: 369 FPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWL---R 425
P ++ D +L D K T V YA+GR E + D F P RWL +
Sbjct: 348 HPISVTLQRYLVNDLVLRDYMIPAK-TLVQVAIYALGR-EPTFFFDPENFDPTRWLSKDK 405
Query: 426 NGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVS 473
N T+ F+ F G R CLG+ +A +EM + ++ F + +
Sbjct: 406 NITY-----FRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQ 448
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 107/239 (44%), Gaps = 29/239 (12%)
Query: 251 KQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY-------LRDIVVS- 302
K LK + +++ E + ++ M + D + F+ ++ +K + ++V++
Sbjct: 215 KLLKNLAFMESDILEKVKEHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITA 274
Query: 303 --FLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
L AG +T ++ L LL +H EV + ++ E ++++ N+ + + Y +A
Sbjct: 275 ADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRS-PCMQDRGHMPYTDA 333
Query: 361 AVYESMR---LFP-----PVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWG 412
V+E R L P V D KF + ++P GT + H +
Sbjct: 334 VVHEVQRYIDLIPTSLPHAVTCDVKF--RNYLIPKGTTILTSLTSVLH-------DNKEF 384
Query: 413 PDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIR 471
P+ F P +L G ++ + P F AG R+C+G+ +A +E+ +++ FN++
Sbjct: 385 PNPEMFDPRHFLDEGGNFKKSNYFMP-FSAGKRICVGEGLARMELFLFLTFILQNFNLK 442
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 293 DKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQL 352
D ++ + AG +T S + L + +V+ + E D+ + ++ ++
Sbjct: 271 DNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRN 330
Query: 353 RELHYLNAAVYESMRLFP--PVQFDSKFAQEDDILPDGTF-VRKGTRVTYHPYAMGRMER 409
R L L A + E +RL P P+ K + I G F V KGT V + +A+ E+
Sbjct: 331 RLL-LLEATIREVLRLRPVAPMLIPHKANVDSSI---GEFAVDKGTEVIINLWALHHNEK 386
Query: 410 IWG-PDCSEFKPERWLR-NGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRK 467
W PD +F PER+L GT + Y F AG R C+G+ +A E+ ++++
Sbjct: 387 EWHQPD--QFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQR 444
Query: 468 FNIRVSDPNQAP 479
F++ V D Q P
Sbjct: 445 FDLEVPDDGQLP 456
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 146/380 (38%), Gaps = 62/380 (16%)
Query: 123 GGGIFNVDGNSWKFQRKIASVELGSFNFKMYAFELVTAEIRFRLIPLLSSAANKVNNILD 182
G G+ +GN WK R+ + + F + E E LI L + ++D
Sbjct: 91 GYGVIFANGNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGA---LMD 147
Query: 183 LQDVFRRFSFDSICKFSFG-----LDPECL-MLNLPVSKFATAFDLASKLSAERALAPSP 236
+F+ + + IC FG D E L MLNL F F L S + + S
Sbjct: 148 PTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNL----FYQTFSLISSVFGQLFELFSG 203
Query: 237 IVWKIKRLLNIGSEKQLKGAIKLVNE-LAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY 295
+ G+ +Q+ ++ +N + ++ R+ + S DL+ ++ ++ +K
Sbjct: 204 FLKHFP-----GAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKS 258
Query: 296 ----------LRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQD 345
L +S AG +T ++ L F L+ ++ V + E ++++ P++
Sbjct: 259 NAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRP 318
Query: 346 LVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMG 405
++ Y A +YE R D+LP G ++ Y +
Sbjct: 319 -PELHDRAKMPYTEAVIYEIQRF-------------SDLLPMGVPHIVTQHTSFRGYIIP 364
Query: 406 RMERIW--------------GPDCSEFKPERWL-RNGTFVPQNPFKYPVFQAGHRVCLGK 450
+ ++ PD F P+ +L NG F P F G R+CLG+
Sbjct: 365 KDTEVFLILSTALHDPHYFEKPDA--FNPDHFLDANGALKKTEAF-IP-FSLGKRICLGE 420
Query: 451 DMALVEMKSAALAVVRKFNI 470
+A E+ +++ F++
Sbjct: 421 GIARAELFLFFTTILQNFSM 440
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/399 (19%), Positives = 155/399 (38%), Gaps = 42/399 (10%)
Query: 123 GGGIFNVDGNSWKFQRKIASVELGSFNF-KMYAFELVTAEIRFRLIPLLSSAANKVNNIL 181
G G+ +G W+ R+ + + F K E + E R + L S ++N L
Sbjct: 91 GYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTL 150
Query: 182 DLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLSAERALAPSPIVWKI 241
+F + + IC FG + PV F DL + + + S +
Sbjct: 151 ----LFHSITSNIICSIVFG---KRFDYKDPV--FLRLLDLFFQSFSLISSFSSQVFELF 201
Query: 242 KRLLNI--GSEKQLKGAIKLVNE-LAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY--- 295
L G+ +Q+ ++ +N + +++ R + S D + ++ ++ DK
Sbjct: 202 SGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPS 261
Query: 296 -------LRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVS 348
L V+S AG +T ++ L F L+ ++ V ++ E ++++ ++ +
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PA 320
Query: 349 FEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRME 408
+ ++ Y +A ++E RL + F D G + K T V + + +
Sbjct: 321 LDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-FPVLSSALHD 379
Query: 409 RIWGPDCSEFKPERWL-------RNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAA 461
+ + F P +L RN F+P F G R+CLG+ +A E+
Sbjct: 380 PRYFETPNTFNPGHFLDANGALKRNEGFMP--------FSLGKRICLGEGIARTELFLFF 431
Query: 462 LAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMVQER 500
+++ F+I P + P + G +P Q R
Sbjct: 432 TTILQNFSIASPVPPEDIDLTPRESGV--GNVPPSYQIR 468
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/399 (19%), Positives = 155/399 (38%), Gaps = 42/399 (10%)
Query: 123 GGGIFNVDGNSWKFQRKIASVELGSFNF-KMYAFELVTAEIRFRLIPLLSSAANKVNNIL 181
G G+ +G W+ R+ + + F K E + E R + L S ++N L
Sbjct: 91 GYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTL 150
Query: 182 DLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLSAERALAPSPIVWKI 241
+F + + IC FG + PV F DL + + + S +
Sbjct: 151 ----LFHSITSNIICSIVFG---KRFDYKDPV--FLRLLDLFFQSFSLISSFSSQVFELF 201
Query: 242 KRLLNI--GSEKQLKGAIKLVNE-LAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY--- 295
L G+ +Q+ ++ +N + +++ R + S D + ++ ++ DK
Sbjct: 202 SGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPS 261
Query: 296 -------LRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVS 348
L V+S AG +T ++ L F L+ ++ V ++ E ++++ ++ +
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PA 320
Query: 349 FEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRME 408
+ ++ Y +A ++E RL + F D G + K T V + + +
Sbjct: 321 LDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-FPVLSSALHD 379
Query: 409 RIWGPDCSEFKPERWL-------RNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAA 461
+ + F P +L RN F+P F G R+CLG+ +A E+
Sbjct: 380 PRYFETPNTFNPGHFLDANGALKRNEGFMP--------FSLGKRICLGEGIARTELFLFF 431
Query: 462 LAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMVQER 500
+++ F+I P + P + G +P Q R
Sbjct: 432 TTILQNFSIASPVPPEDIDLTPRESGV--GNVPPSYQIR 468
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/399 (19%), Positives = 155/399 (38%), Gaps = 42/399 (10%)
Query: 123 GGGIFNVDGNSWKFQRKIASVELGSFNF-KMYAFELVTAEIRFRLIPLLSSAANKVNNIL 181
G G+ +G W+ R+ + + F K E + E R + L S ++N L
Sbjct: 91 GYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTL 150
Query: 182 DLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLSAERALAPSPIVWKI 241
+F + + IC FG + PV F DL + + + S +
Sbjct: 151 ----LFHSITSNIICSIVFG---KRFDYKDPV--FLRLLDLFFQSFSLISSFSSQVFELF 201
Query: 242 KRLLN--IGSEKQLKGAIKLVNE-LAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY--- 295
L G+ +Q+ ++ +N + +++ R + S D + ++ ++ DK
Sbjct: 202 SGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPS 261
Query: 296 -------LRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVS 348
L V+S AG +T ++ L F L+ ++ V ++ E ++++ ++ +
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PA 320
Query: 349 FEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRME 408
+ ++ Y +A ++E RL + F D G + K T V + + +
Sbjct: 321 LDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-FPVLSSALHD 379
Query: 409 RIWGPDCSEFKPERWL-------RNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAA 461
+ + F P +L RN F+P F G R+CLG+ +A E+
Sbjct: 380 PRYFETPNTFNPGHFLDANGALKRNEGFMP--------FSLGKRICLGEGIARTELFLFF 431
Query: 462 LAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMVQER 500
+++ F+I P + P + G +P Q R
Sbjct: 432 TTILQNFSIASPVPPEDIDLTPRESGV--GNVPPSYQIR 468
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/399 (19%), Positives = 155/399 (38%), Gaps = 42/399 (10%)
Query: 123 GGGIFNVDGNSWKFQRKIASVELGSFNF-KMYAFELVTAEIRFRLIPLLSSAANKVNNIL 181
G G+ +G W+ R+ + + F K E + E R + L S ++N L
Sbjct: 91 GYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTL 150
Query: 182 DLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLSAERALAPSPIVWKI 241
+F + + IC FG + PV F DL + + + S +
Sbjct: 151 ----LFHSITSNIICSIVFG---KRFDYKDPV--FLRLLDLFFQSFSLISSFSSQVFELF 201
Query: 242 KRLLNI--GSEKQLKGAIKLVNE-LAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY--- 295
L G+ +Q+ ++ +N + +++ R + S D + ++ ++ DK
Sbjct: 202 SGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPS 261
Query: 296 -------LRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVS 348
L V+S AG +T ++ L F L+ ++ V ++ E ++++ ++ +
Sbjct: 262 SEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PA 320
Query: 349 FEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRME 408
+ ++ Y +A ++E RL + F D G + K T V + + +
Sbjct: 321 LDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-FPVLSSALHD 379
Query: 409 RIWGPDCSEFKPERWL-------RNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAA 461
+ + F P +L RN F+P F G R+CLG+ +A E+
Sbjct: 380 PRYFETPNTFNPGHFLDANGALKRNEGFMP--------FSLGKRICLGEGIARTELFLFF 431
Query: 462 LAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMVQER 500
+++ F+I P + P + G +P Q R
Sbjct: 432 TTILQNFSIASPVPPEDIDLTPRESGV--GNVPPSYQIR 468
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Query: 298 DIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHY 357
++V AG DTV + ++ L E++ I+ E D ++ + +L Y
Sbjct: 285 NLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIG-RERRPRLSDRPQLPY 343
Query: 358 LNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSE 417
L A + E+ R + F + D +G ++ K V + + + +W D SE
Sbjct: 344 LEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWE-DPSE 402
Query: 418 FKPERWLRNGTFVPQNPF--KYPVFQAGHRVCLGKDMALVEM 457
F+PER+L P K +F G R C+G+ +A E+
Sbjct: 403 FRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEI 444
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 31/243 (12%)
Query: 251 KQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDK----------YLRDIV 300
K LK + + E + + + + D + F+ ++ +K L V
Sbjct: 214 KVLKNVALTRSYIREKVKEHQASLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTV 273
Query: 301 VSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+AG +T ++ L LL +H EV + ++ E D ++ ++ + + Y +A
Sbjct: 274 ADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRS-PCMQDRSHMPYTDA 332
Query: 361 AVYESMR---LFP-----PVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWG 412
V+E R L P V D+KF + ++P GT + H +
Sbjct: 333 VVHEIQRYSDLVPTGVPHAVTTDTKF--RNYLIPKGTTIMALLTSVLH-------DDKEF 383
Query: 413 PDCSEFKPERWL-RNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIR 471
P+ + F P +L +NG F + F F AG R+C G+ +A +E+ +++ FN++
Sbjct: 384 PNPNIFDPGHFLDKNGNFKKSDYFM--PFSAGKRICAGEGLARMELFLFLTTILQNFNLK 441
Query: 472 VSD 474
D
Sbjct: 442 SVD 444
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/399 (19%), Positives = 154/399 (38%), Gaps = 42/399 (10%)
Query: 123 GGGIFNVDGNSWKFQRKIASVELGSFNF-KMYAFELVTAEIRFRLIPLLSSAANKVNNIL 181
G G+ +G W+ R+ + + F K E + E R + L S ++N L
Sbjct: 91 GYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTL 150
Query: 182 DLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLSAERALAPSPIVWKI 241
+F + + IC FG + PV F DL + + + S +
Sbjct: 151 ----LFHSITSNIICSIVFG---KRFDYKDPV--FLRLLDLFFQSFSLISSFSSQVFELF 201
Query: 242 KRLLNI--GSEKQLKGAIKLVNE-LAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY--- 295
L G+ +Q+ ++ +N + +++ R + S D + ++ ++ DK
Sbjct: 202 SGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPS 261
Query: 296 -------LRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVS 348
L V+S AG +T ++ L F L+ ++ V ++ E ++++ ++ +
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PA 320
Query: 349 FEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRME 408
+ ++ Y +A ++E RL + F D G + K T V + + +
Sbjct: 321 LDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV-FPVLSSALHD 379
Query: 409 RIWGPDCSEFKPERWL-------RNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAA 461
+ + F P +L RN F+P F G R+C G+ +A E+
Sbjct: 380 PRYFETPNTFNPGHFLDANGALKRNEGFMP--------FSLGKRICAGEGIARTELFLFF 431
Query: 462 LAVVRKFNIRVSDPNQAPRFAPGLTATVSGGLPVMVQER 500
+++ F+I P + P + G +P Q R
Sbjct: 432 TTILQNFSIASPVPPEDIDLTPRESGV--GNVPPSYQIR 468
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 25/152 (16%)
Query: 309 DTVASGLTSFFWLLSQHSEVESAIRNES----DKIMKPNQDLVSFEQLRELHYLNAAVYE 364
DT A L + L+++ +V+ +R ES I + Q + EL L AA+ E
Sbjct: 291 DTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATT-----ELPLLRAALKE 345
Query: 365 SMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWL 424
++RL+P F + D +L + GT V Y++GR ++ P + P+RWL
Sbjct: 346 TLRLYPVGLFLERVVSSDLVL-QNYHIPAGTLVQVFLYSLGRNAALF-PRPERYNPQRWL 403
Query: 425 ------RNGTFVPQNPFKYPVFQAGHRVCLGK 450
RN VP F G R CLG+
Sbjct: 404 DIRGSGRNFHHVP--------FGFGMRQCLGR 427
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 7/175 (4%)
Query: 300 VVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLN 359
+ L G +T + L + +++ V+ +R E + + +S + L+ + L
Sbjct: 281 ITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDIS-KMLQMVPLLK 339
Query: 360 AAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWG-PDCSEF 418
A++ E++RL P ++ + D +L D + T V YAMGR + PD +F
Sbjct: 340 ASIKETLRLHPISVTLQRYPESDLVLQD-YLIPAKTLVQVAIYAMGRDPAFFSSPD--KF 396
Query: 419 KPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRVS 473
P RWL + F+ F G R C+G+ +A +EM + ++ F + +
Sbjct: 397 DPTRWLSKDKDLIH--FRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEMQ 449
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 34/239 (14%)
Query: 262 ELAETMIHQRQQMGFSKK---------NDLLSRFMASIDDDKYLRDIVVSFLLAGRDTVA 312
+LAE++ H+ Q S ND LS F DD + + +V + +T+
Sbjct: 220 KLAESLRHENLQKRESISELISLRMFLNDTLSTF----DDLEKAKTHLVVLWASQANTIP 275
Query: 313 SGLTSFFWLL-------SQHSEVESAIRNESDKI-MKPNQDLVSFEQLRELHYLNAAVYE 364
+ S F ++ + EV+ + N K+ ++ N +S +L +L L++ + E
Sbjct: 276 ATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKE 335
Query: 365 SMRLFPPVQFDSKFAQEDDIL--PDGTF-VRKGTRVTYHPYAMGRMERIWGPDCSEFKPE 421
S+RL + + A+ED L DG++ +RK + +P M I+ PD FK +
Sbjct: 336 SLRL-SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY-PDPLTFKYD 393
Query: 422 RWL-RNG----TFVPQN---PFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRV 472
R+L NG TF + Y F +G +C G+ A+ E+K + ++ F + +
Sbjct: 394 RYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELEL 452
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 34/239 (14%)
Query: 262 ELAETMIHQRQQMGFSKK---------NDLLSRFMASIDDDKYLRDIVVSFLLAGRDTVA 312
+LAE++ H+ Q S ND LS F DD + + +V + +T+
Sbjct: 220 KLAESLRHENLQKRESISELISLRMFLNDTLSTF----DDLEKAKTHLVVLWASQANTIP 275
Query: 313 SGLTSFFWLL-------SQHSEVESAIRNESDKI-MKPNQDLVSFEQLRELHYLNAAVYE 364
+ S F ++ + EV+ + N K+ ++ N +S +L +L L++ + E
Sbjct: 276 ATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKE 335
Query: 365 SMRLFPPVQFDSKFAQEDDIL--PDGTF-VRKGTRVTYHPYAMGRMERIWGPDCSEFKPE 421
S+RL + + A+ED L DG++ +RK + +P M I+ PD FK +
Sbjct: 336 SLRL-SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY-PDPLTFKYD 393
Query: 422 RWL-RNG----TFVPQN---PFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRV 472
R+L NG TF + Y F +G +C G+ A+ E+K + ++ F + +
Sbjct: 394 RYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELEL 452
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 44/223 (19%)
Query: 254 KGAIKLVNELA--ETMIHQRQQMGFSKKNDLLSRFMASIDDDKYLRDIVVS----FLLAG 307
+G I V +A + +I +R++ + D++S + + DK + S +AG
Sbjct: 179 EGNIMAVQAMAYFKELIQKRKR---HPQQDMISMLLKGREKDKLTEEEAASTCILLAIAG 235
Query: 308 RDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMR 367
+T + +++ L QH E +R N DL+ AV E +R
Sbjct: 236 HETTVNLISNSVLCLLQHPEQLLKLRE--------NPDLI-----------GTAVEECLR 276
Query: 368 LFPPVQFDSKFAQED-DILPDGTFVRKGTRVTYHPYAMGRMERIW-GPDCSEFKPERWLR 425
P Q ++ A ED DI G +R+G +V A R I+ PD +
Sbjct: 277 YESPTQMTARVASEDIDIC--GVTIRQGEQVYLLLGAANRDPSIFTNPDVFD-------- 326
Query: 426 NGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKF 468
+ ++P + F GH VCLG +A +E + A ++++
Sbjct: 327 ----ITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRM 365
>pdb|3BDZ|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BDZ|B Chain B, The Role Of Asn 242 In P450cin
pdb|3BE0|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BE0|B Chain B, The Role Of Asn 242 In P450cin
Length = 397
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 103/265 (38%), Gaps = 46/265 (17%)
Query: 238 VWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSR-FMASIDDDKYL 296
VW I + N E+ + +LV A T+I +R+ + ND++SR M+ ID +
Sbjct: 164 VWAITHVEN--PEEGAEIFAELVAH-ARTLIAERRT---NPGNDIMSRVIMSKIDGESLS 217
Query: 297 RDIVVSF----LLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQL 352
D ++ F LL G D A L+S FW L+ E+ + + I PN
Sbjct: 218 EDDLIGFFTILLLGGIDATARFLSSVFWRLAWDIELRRRLIAHPELI--PN--------- 266
Query: 353 RELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWG 412
AV E +R + P QE + +T P G+ +W
Sbjct: 267 --------AVDELLRFYGPAMVGRLVTQEVTV----------GDITMKP---GQTAMLWF 305
Query: 413 PDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRV 472
P S + + + + P ++ G CLG + VE + A +++
Sbjct: 306 PIASRDRSAFDSPDNIVIERTPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFS 365
Query: 473 SDPNQAPRFAPGLTATVSGGLPVMV 497
DPN+ + L V+G L V +
Sbjct: 366 LDPNKECEW---LMGQVAGMLHVPI 387
>pdb|4FB2|A Chain A, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|B Chain B, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|C Chain C, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|D Chain D, Crystal Structure Of Substrate-Free P450cin
pdb|4FYZ|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FYZ|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FMX|A Chain A, Crystal Structure Of Substrate-Bound P450cin
pdb|4FMX|B Chain B, Crystal Structure Of Substrate-Bound P450cin
Length = 398
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 103/265 (38%), Gaps = 46/265 (17%)
Query: 238 VWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSR-FMASIDDDKYL 296
VW I + N E+ + +LV A T+I +R+ + ND++SR M+ ID +
Sbjct: 165 VWAITHVEN--PEEGAEIFAELVAH-ARTLIAERRT---NPGNDIMSRVIMSKIDGESLS 218
Query: 297 RDIVVSF----LLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQL 352
D ++ F LL G D A L+S FW L+ E+ + + I PN
Sbjct: 219 EDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPELI--PN--------- 267
Query: 353 RELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWG 412
AV E +R + P QE + +T P G+ +W
Sbjct: 268 --------AVDELLRFYGPAMVGRLVTQEVTV----------GDITMKP---GQTAMLWF 306
Query: 413 PDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRV 472
P S + + + + P ++ G CLG + VE + A +++
Sbjct: 307 PIASRDRSAFDSPDNIVIERTPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFS 366
Query: 473 SDPNQAPRFAPGLTATVSGGLPVMV 497
DPN+ + L V+G L V +
Sbjct: 367 LDPNKECEW---LMGQVAGMLHVPI 388
>pdb|1T2B|A Chain A, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
pdb|1T2B|B Chain B, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
Length = 397
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 103/265 (38%), Gaps = 46/265 (17%)
Query: 238 VWKIKRLLNIGSEKQLKGAIKLVNELAETMIHQRQQMGFSKKNDLLSR-FMASIDDDKYL 296
VW I + N E+ + +LV A T+I +R+ + ND++SR M+ ID +
Sbjct: 164 VWAITHVEN--PEEGAEIFAELVAH-ARTLIAERRT---NPGNDIMSRVIMSKIDGESLS 217
Query: 297 RDIVVSF----LLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQL 352
D ++ F LL G D A L+S FW L+ E+ + + I PN
Sbjct: 218 EDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPELI--PN--------- 266
Query: 353 RELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWG 412
AV E +R + P QE + +T P G+ +W
Sbjct: 267 --------AVDELLRFYGPAMVGRLVTQEVTV----------GDITMKP---GQTAMLWF 305
Query: 413 PDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFNIRV 472
P S + + + + P ++ G CLG + VE + A +++
Sbjct: 306 PIASRDRSAFDSPDNIVIERTPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFS 365
Query: 473 SDPNQAPRFAPGLTATVSGGLPVMV 497
DPN+ + L V+G L V +
Sbjct: 366 LDPNKECEW---LMGQVAGMLHVPI 387
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 78/206 (37%), Gaps = 33/206 (16%)
Query: 293 DKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQL 352
D+ LR V +LAG D ++ + + +H E A R + + +L+ +
Sbjct: 223 DEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELIRY--- 279
Query: 353 RELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWG 412
L P + A+ED L G ++KG V A R +
Sbjct: 280 ---------------LTVPYSPTPRIAREDLTLA-GQEIKKGDSVICSLPAANR-DPALA 322
Query: 413 PDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKF-NIR 471
PD V + P + F G CLG +A +E+++ + R+F +R
Sbjct: 323 PDVDRLD----------VTREPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALR 372
Query: 472 VSDPNQAPRFAPGLTATVSGGLPVMV 497
++DP Q F LT G +MV
Sbjct: 373 LADPAQDTEFR--LTTPAYGLTELMV 396
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 349 FEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRME 408
++++RE + A+ E++R PPV + +E L D T + +G V + R E
Sbjct: 231 WQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQT-IEEGEYVRVWIASANRDE 289
Query: 409 RIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKF 468
++ D +F P+R NP + F +G +CLG +A +E + A ++F
Sbjct: 290 EVFH-DGEKFIPDR----------NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRF 338
Query: 469 -NIRVSDPNQAP 479
+I + D + P
Sbjct: 339 RHIEILDTEKVP 350
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 349 FEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRME 408
++++RE + A+ E++R PPV + +E L D T + +G V + R E
Sbjct: 231 WQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQT-IEEGEYVRVWIASANRDE 289
Query: 409 RIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKF 468
++ D +F P+R NP + F +G +CLG +A +E + A ++F
Sbjct: 290 EVFH-DGEKFIPDR----------NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRF 338
Query: 469 -NIRVSDPNQAP 479
+I + D + P
Sbjct: 339 RHIEILDTEKVP 350
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 112/299 (37%), Gaps = 51/299 (17%)
Query: 178 NNILDLQDVFRRFSFDSICKFSFGLDP--ECLMLNLPVSKFATAFDLASKLSAERALAPS 235
+ + L D + FD + F+ L C +L P+ + D +LS E L
Sbjct: 123 STVEQLIDKLPQGDFDFVQHFAHPLPALVMCQLLGFPLEDY----DTVGRLSIETNLG-- 176
Query: 236 PIVWKIKRLLNIGSEKQL-----KGAIKLVNELAETMIHQRQQMGFSKKNDLLSRFMASI 290
L + +++ + +G ++ + L + ++ + G +D++ F +
Sbjct: 177 ---------LALSNDQDILVKVEQGLGRMFDYLVAAIEKRKVEPGDDLTSDIVRAFHDGV 227
Query: 291 DDDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFE 350
DD LR +V + L+AG +T L + +QH + I+ + + P
Sbjct: 228 LDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE--LAPQ------- 278
Query: 351 QLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERI 410
AV E +R P + + +D +G + GT V + R R+
Sbjct: 279 ----------AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRV 328
Query: 411 WGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFN 469
+ D F + T + P F G CLG +A +E+ A A+ + +
Sbjct: 329 FA-DADRF-------DITVKREAPSI--AFGGGPHFCLGTALARLELTEAVAALATRLD 377
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 103/265 (38%), Gaps = 41/265 (15%)
Query: 206 CLMLNLPVSKFATAFDLASKLSAERALA-PSPIVWKIKRLLNIGSEKQLKGAIKLVNELA 264
C +L P+ + T L+ + + AL+ I+ K++ +G ++ + L
Sbjct: 163 CQLLGFPLEDYDTVGRLSIETNLGLALSNDQDILVKVE-----------QGLGRMFDYLV 211
Query: 265 ETMIHQRQQMGFSKKNDLLSRFMASIDDDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQ 324
+ ++ + G +D++ F + DD LR +V + L+AG +T L + +Q
Sbjct: 212 AAIEKRKVEPGDDLTSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQ 271
Query: 325 HSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDI 384
H D+ MK ++ Q AV E +R P + + +D
Sbjct: 272 H----------PDQWMKIKENPELAPQ---------AVEEVLRWSPTLPVTATRVAAEDF 312
Query: 385 LPDGTFVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGH 444
+G + GT V + R R++ D F + T + P F G
Sbjct: 313 EVNGVRIPTGTPVFMCAHVAHRDPRVFA-DADRF-------DITVKREAPSI--AFGGGP 362
Query: 445 RVCLGKDMALVEMKSAALAVVRKFN 469
CLG +A +E+ A A+ + +
Sbjct: 363 HFCLGTALARLELTEAVAALATRLD 387
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 28/161 (17%)
Query: 325 HSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPV-----QFDSKFA 379
H+++ IR N V+ E + ++ + VYES+R+ PPV + S F
Sbjct: 300 HTQLAEEIRGAIKSYGDGN---VTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFT 356
Query: 380 QEDDILPDGTF-VRKGTRV-TYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKY 437
E D TF V+KG + Y P+A + P+ E+ P+R++ +G + KY
Sbjct: 357 IESH---DATFEVKKGEMLFGYQPFATKDPKVFDRPE--EYVPDRFVGDGEAL----LKY 407
Query: 438 PVFQAG---------HRVCLGKDMALVEMKSAALAVVRKFN 469
+ G ++ C GKD ++ + + + R+++
Sbjct: 408 VWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYD 448
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 327 EVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILP 386
+V + + E ++K N ++ + ++ + VYE +R PPV A++D ++
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIE 375
Query: 387 --DGTFVRKGTRV--TYHPYAMGRMERIWGPDCSEFKPERW--------LRNGTFVPQNP 434
D F K + Y P A R +I+ EF PER+ LR+ +
Sbjct: 376 SHDAAFKVKAGEMLYGYQPLAT-RDPKIFD-RADEFVPERFVGEEGEKLLRHVLWSNGPE 433
Query: 435 FKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFN 469
+ P G++ C GKD ++ + + + R+++
Sbjct: 434 TETPT--VGNKQCAGKDFVVLVARLFVIEIFRRYD 466
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 16/112 (14%)
Query: 359 NAAVYESMRLFPPVQFDSKFAQEDDILPDGTF-VRKGTRVTYHPYAMGRMERIWG-PDCS 416
+A + E+MR PPVQ S++A +D L GT V KG + A R I G PD
Sbjct: 290 SAVIEETMRYDPPVQLVSRYAGDD--LTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPD-- 345
Query: 417 EFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKF 468
F P+R ++ F G CLG +A +E A A+ +F
Sbjct: 346 RFDPDRAQ----------IRHLGFGKGAHFCLGAPLARLEATVALPALAARF 387
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 327 EVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILP 386
+V + + E ++K N ++ + ++ + VYE +R PPV A++D ++
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIE 375
Query: 387 --DGTFVRKGTRV--TYHPYAMGRMERIWGPDCSEFKPERW--------LRNGTFVPQNP 434
D F K + Y P A R +I+ EF PER+ LR+ +
Sbjct: 376 SHDAAFKVKAGEMLYGYQPLAT-RDPKIFD-RADEFVPERFVGEEGEKLLRHVLWSNGPE 433
Query: 435 FKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKFN 469
+ P G++ C GKD ++ + + + R+++
Sbjct: 434 TETPT--VGNKQCAGKDFVVLVARLFVIEIFRRYD 466
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 91/223 (40%), Gaps = 35/223 (15%)
Query: 280 NDLLSRFMASIDD-----DKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRN 334
+DL+S + + D ++ L D+ + L+AG ++ + + F +LL E+ + +
Sbjct: 223 DDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLD 282
Query: 335 ESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKG 394
+ I ++L + L + AV ++A ED L G +R G
Sbjct: 283 RPELIPSAVEELTRWVPL----GVGTAV-------------PRYAVEDVTL-RGVTIRAG 324
Query: 395 TRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMAL 454
V A R ++ PD +R P ++ F G CLG +A
Sbjct: 325 EPVLASTGAANR-DQAQFPDADRIDVDR----------TPNQHLGFGHGVHHCLGAPLAR 373
Query: 455 VEMKSAALAVVRKF-NIRVSDPNQAPRFAPGLTATVSGGLPVM 496
VE++ A ++++ IR+ P R++ G+ LPV+
Sbjct: 374 VELQVALEVLLQRLPGIRLGIPETQLRWSEGMLLRGPLELPVV 416
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 92/223 (41%), Gaps = 35/223 (15%)
Query: 280 NDLLSRFMASIDD-----DKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRN 334
+DL+S + + D ++ L D+ + L+AG ++ + + F +LL E+ + +
Sbjct: 223 DDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLD 282
Query: 335 ESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKG 394
+ I ++L + L + A FP ++A ED L G +R G
Sbjct: 283 RPELIPSAVEELTRWVPL----GVGTA-------FP------RYAVEDVTL-RGVTIRAG 324
Query: 395 TRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMAL 454
V A R ++ PD +R P ++ F G CLG +A
Sbjct: 325 EPVLASTGAANR-DQAQFPDADRIDVDR----------TPNQHLGFGHGVHHCLGAPLAR 373
Query: 455 VEMKSAALAVVRKF-NIRVSDPNQAPRFAPGLTATVSGGLPVM 496
VE++ A ++++ IR+ P R++ G+ LPV+
Sbjct: 374 VELQVALEVLLQRLPGIRLGIPETQLRWSEGMLLRGPLELPVV 416
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 71/186 (38%), Gaps = 41/186 (22%)
Query: 280 NDLLSRFMA--------SIDDDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESA 331
+DL SR ++ ++D+ R + + L G DTVA+ + L++H E +
Sbjct: 203 DDLFSRILSEPVGGRPWTVDE---ARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRL 259
Query: 332 IRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFV 391
+R D I AA E MR +P V D+ DG +
Sbjct: 260 LRERPDLI-------------------PAAADELMRRYPTVAVSRNAVA--DVDADGVTI 298
Query: 392 RKGTRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKD 451
RKG V Y P + ++ E + +R L P ++ G C+G
Sbjct: 299 RKGDLV-YLPSVLHNLDPASFEAPEEVRFDRGL--------APIRHTTMGVGAHRCVGAG 349
Query: 452 MALVEM 457
+A +E+
Sbjct: 350 LARMEV 355
>pdb|1UUL|A Chain A, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|B Chain B, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|C Chain C, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|D Chain D, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|E Chain E, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|F Chain F, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|G Chain G, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|H Chain H, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|I Chain I, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|J Chain J, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
Length = 202
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 263 LAETMIHQRQQMGFSKKNDLLS-RFMASIDDDKYLRDIVVSFLLAGRDT-VASGLTSFFW 320
LA+ + G K+ D ++ R + ID + LR I V+ L GRD A L F
Sbjct: 105 LADKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164
Query: 321 LLSQHSEVESAIRNESDKIMKPNQD 345
+ +H EV A DK MKP+ +
Sbjct: 165 FVEKHGEVCPANWKPGDKTMKPDPE 189
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 28/177 (15%)
Query: 319 FWLLS---QHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFD 375
FW++ H E A+R E ++ + L E+ + ++ ++E++RL
Sbjct: 274 FWVMGYLLTHPEALRAVREE----IQGGKHLRLEERQKNTPVFDSVLWETLRLTAAALIT 329
Query: 376 SKFAQEDDI-LPDGT--FVRKGTRVTYHPYAMGRMERIWGPDCSEFKPERWL-------- 424
Q+ I L +G +R+G R+ P+ +M+ F+ +R+L
Sbjct: 330 RDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKK 389
Query: 425 ---RNGTFVPQNPFKYPVFQAGHR--VCLGKDMALVEMKSAALAVVRKFNIRVSDPN 476
+NG V KYP G +C G+ A+ +K ++ +F++ + D N
Sbjct: 390 DFFKNGARV-----KYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKN 441
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 13/127 (10%)
Query: 354 ELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGP 413
++ L A+ E +R PV+ + D + GT +R G ++ + E ++G
Sbjct: 262 DVDLLPGAIEEMLRWTSPVKNMCRTLTADTVF-HGTELRAGEKIMLMFESANFDESVFG- 319
Query: 414 DCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAALAVVRKF-NIRV 472
D F+ +R NP + F G CLG +A +E++ V+R+ ++R+
Sbjct: 320 DPDNFRIDR----------NPNSHVAFGFGTHFCLGNQLARLELRLMTERVLRRLPDLRL 369
Query: 473 SDPNQAP 479
+D P
Sbjct: 370 ADDAPVP 376
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 35/223 (15%)
Query: 280 NDLLSRFMASIDD-----DKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRN 334
+DL+S + + D ++ L D+ + L+AG ++ + + F +LL E+ + +
Sbjct: 223 DDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLD 282
Query: 335 ESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKG 394
+ I ++L + L + A ++A ED L G +R G
Sbjct: 283 RPELIPSAVEELTRWVPL----GVGTAA-------------PRYAVEDVTL-RGVTIRAG 324
Query: 395 TRVTYHPYAMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMAL 454
V A R ++ PD +R P ++ F G CLG +A
Sbjct: 325 EPVLASTGAANR-DQAQFPDADRIDVDR----------TPNQHLGFGHGVHHCLGAPLAR 373
Query: 455 VEMKSAALAVVRKF-NIRVSDPNQAPRFAPGLTATVSGGLPVM 496
VE++ A ++++ IR+ P R++ G+ LPV+
Sbjct: 374 VELQVALEVLLQRLPGIRLGIPETQLRWSEGMLLRGPLELPVV 416
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 33/168 (19%)
Query: 292 DDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQ 351
DDKY+ V+ AG DT +S LS++ E + + SD + P
Sbjct: 253 DDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAK--SDPALIPR-------- 302
Query: 352 LRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIW 411
V E++R PV+ + A D + G +++G R+ + R E ++
Sbjct: 303 ---------LVDEAVRWTAPVKSFMRTALADTEV-RGQNIKRGDRIMLSYPSANRDEEVF 352
Query: 412 G-PDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMK 458
PD EF R+ P ++ F G +CLG+ +A +EMK
Sbjct: 353 SNPD--EFDITRF----------PNRHLGFGWGAHMCLGQHLAKLEMK 388
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 23/129 (17%)
Query: 348 SFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQE-----DDILPDGTFVRKGTRVTYHPY 402
S++ +RE L A V E++R PPV + +E D ++ +G VR
Sbjct: 231 SWDYVREKGALKA-VEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWI------A 283
Query: 403 AMGRMERIWGPDCSEFKPERWLRNGTFVPQNPFKYPVFQAGHRVCLGKDMALVEMKSAAL 462
+ R E ++ D F P+R P + F +G +CLG +A +E + A
Sbjct: 284 SANRDEEVFK-DPDSFIPDR----------TPNPHLSFGSGIHLCLGAPLARLEARIALE 332
Query: 463 AVVRKFNIR 471
+KF ++
Sbjct: 333 EFAKKFRVK 341
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 20/97 (20%)
Query: 301 VSFLLAGRDTVASGLTSFFWLLSQHSEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
V L AG +T + L L H +V +R + A
Sbjct: 249 VHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPEST-------------------PA 289
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRV 397
AV E MR PPVQ +++A ED L D R G+RV
Sbjct: 290 AVEELMRYDPPVQAVTRWAYEDIRLGDHDIPR-GSRV 325
>pdb|3O1A|A Chain A, Structure Of Oxye (Cyp165d3), A Cytochrome P450 Involved
In Teicoplanin Biosynthesis
Length = 417
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 439 VFQAGHRVCLGKDMALVEMKSAALAVVRKF-NIRVSDPNQAPRFAPGLTA 487
F G C+G +A ++++ A AVV +F ++R++ P + RF PG A
Sbjct: 357 AFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPEEDLRFKPGRPA 406
>pdb|3OO3|A Chain A, Crystal Structure Of The Orf6 (Cyp165d3) Monooxygenase
Involved In Teicoplanin Biosynthesis
Length = 384
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 439 VFQAGHRVCLGKDMALVEMKSAALAVVRKF-NIRVSDPNQAPRFAPGLTA 487
F G C+G +A ++++ A AVV +F ++R++ P + RF PG A
Sbjct: 324 AFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPEEDLRFKPGRPA 373
>pdb|1ZUO|A Chain A, Structure Of Human Ubiquitin-Conjugating Enzyme (Ubci)
Involved In Embryo Attachment And Implantation
pdb|1ZUO|B Chain B, Structure Of Human Ubiquitin-Conjugating Enzyme (Ubci)
Involved In Embryo Attachment And Implantation
Length = 186
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 63 NNLCDWYTHLLAKSPTGTIHLHALGNTVTSNPENVEYILK--TRFDNYPKGKPFSVILGD 120
++L DW+ L P +H + E +EYIL + DN+P PF ++
Sbjct: 57 DSLYDWHVKLQKVDPDSPLHSDL---QILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLP 113
Query: 121 LLGGG 125
+L GG
Sbjct: 114 VLSGG 118
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,294,412
Number of Sequences: 62578
Number of extensions: 572607
Number of successful extensions: 1490
Number of sequences better than 100.0: 118
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 1299
Number of HSP's gapped (non-prelim): 123
length of query: 502
length of database: 14,973,337
effective HSP length: 103
effective length of query: 399
effective length of database: 8,527,803
effective search space: 3402593397
effective search space used: 3402593397
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)