BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010739
(502 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225434512|ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic [Vitis vinifera]
Length = 511
Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/502 (78%), Positives = 435/502 (86%), Gaps = 1/502 (0%)
Query: 1 MASVPELGFALSPNFLLQRHKLLVPQLHGSCLTRPPPRISTRIKNYQNPSFIATKVSKIR 60
+ S ELGF LS +F +QR +L+VP+ S L R +T I N+QNP F+ K KIR
Sbjct: 11 LMSPTELGFTLSSSFSIQRPRLIVPKFSRSFLGEYCSRATT-ICNHQNPRFVVPKRDKIR 69
Query: 61 EFRFLKSVELDQFVTSDDEDEMSEEFFEAIEELERMTREPSDILEEMNDRLSARELQLVL 120
EFR KSVELDQF+TSDDEDEMSE FFEAIEELERMTREPSD+LEEMNDRLSARELQLVL
Sbjct: 70 EFRLFKSVELDQFLTSDDEDEMSEGFFEAIEELERMTREPSDVLEEMNDRLSARELQLVL 129
Query: 121 VYFSQEGRDSWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLV 180
VYFSQEGRDSWCALEVFEWL+KENRVD ETMELMVSIMCSWVKK IE E VGDVVDLLV
Sbjct: 130 VYFSQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCSWVKKLIEGEHDVGDVVDLLV 189
Query: 181 DMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYL 240
DMDCVGLKPGFSMIEKVISLYWEME+KE+AVLFVK VL R IAY+E DG+G +GGPTGYL
Sbjct: 190 DMDCVGLKPGFSMIEKVISLYWEMEEKEKAVLFVKEVLRREIAYSEDDGDGHKGGPTGYL 249
Query: 241 AWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAG 300
AWKMM EG Y A+KLVIHLRESGLKPEVYSYLIA+TAVVKELNEF KALRKLKG+ ++G
Sbjct: 250 AWKMMAEGNYRGAVKLVIHLRESGLKPEVYSYLIAMTAVVKELNEFAKALRKLKGFTKSG 309
Query: 301 SIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEA 360
IAELD +N+ LIEKYQSDLLADG RLSSW IQEG S L+GVV+ERLLAMYICAGRGLEA
Sbjct: 310 LIAELDAENVELIEKYQSDLLADGVRLSSWVIQEGRSPLHGVVYERLLAMYICAGRGLEA 369
Query: 361 ERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRG 420
ERQLWEMKLVGKEAD +LYDIVLAICAS+ E SA+SRLL+ +EV +S+ +KKTLSWLLRG
Sbjct: 370 ERQLWEMKLVGKEADRELYDIVLAICASKKEASAISRLLTGMEVTSSIRRKKTLSWLLRG 429
Query: 421 YIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTS 480
YIKG H +DA+ET+ KMLDLGL PEY+DR AVLQGLR RIQQ+GNVE YL LCK LSD +
Sbjct: 430 YIKGSHFDDASETIIKMLDLGLCPEYLDRAAVLQGLRNRIQQTGNVETYLKLCKHLSDAN 489
Query: 481 LIGPCLVYLYIKKYKLWIIKML 502
LIGPCLVYLYIKKYKLWI+K +
Sbjct: 490 LIGPCLVYLYIKKYKLWILKTI 511
>gi|255560355|ref|XP_002521193.1| conserved hypothetical protein [Ricinus communis]
gi|223539607|gb|EEF41193.1| conserved hypothetical protein [Ricinus communis]
Length = 499
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/503 (76%), Positives = 431/503 (85%), Gaps = 13/503 (2%)
Query: 3 SVPELGFALSPNFLLQR-HKLLVPQLHGSCLTRPPPRISTRIKNYQNPSFIATKVSKIR- 60
SV L ++S FLLQR +KLL P+ ++S+ IK ++ +F+ + SK R
Sbjct: 7 SVASLTKSVSSTFLLQRRYKLLNPRFF---------QLSS-IKFPKSSNFVVAQQSKSRN 56
Query: 61 -EFRFLKSVELDQFVTSDDEDEMSEEFFEAIEELERMTREPSDILEEMNDRLSARELQLV 119
EFR LKSVELDQ++ SDDE+EMSE FFEAIEELERMTREPSD+LEEMND+LSARELQLV
Sbjct: 57 REFRVLKSVELDQYIASDDEEEMSEGFFEAIEELERMTREPSDVLEEMNDKLSARELQLV 116
Query: 120 LVYFSQEGRDSWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLL 179
LVYFSQEGRDSWCALEVFEWL+KENRVD ETMELMVSIMCSW+KK IE E +GDVVDLL
Sbjct: 117 LVYFSQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCSWIKKLIEGEHEIGDVVDLL 176
Query: 180 VDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGY 239
VDMDCVGLKP FSMIEKVISLYWE+ +KE++V FVK VL R +AY E DGEGQ+GGPTGY
Sbjct: 177 VDMDCVGLKPSFSMIEKVISLYWEIGEKEKSVSFVKEVLRREVAYFEDDGEGQKGGPTGY 236
Query: 240 LAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRA 299
LAWKMMV+G Y DA+KLVIH RESGLKPEVYSYLIA+TAVVKELNEF KALRKLKG+ ++
Sbjct: 237 LAWKMMVDGNYRDAVKLVIHFRESGLKPEVYSYLIAMTAVVKELNEFAKALRKLKGFAKS 296
Query: 300 GSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLE 359
G IAELD +N LIEKYQSDL+ADG LSSW IQEG SLYGVVHERLLAMYICAGRGL+
Sbjct: 297 GLIAELDAENTRLIEKYQSDLIADGVCLSSWVIQEGSPSLYGVVHERLLAMYICAGRGLD 356
Query: 360 AERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLR 419
AERQLWEMKLVGK ADGDLYDIVLAICASQ E SAVSRLL+R+EV +SL KKKTLSWLLR
Sbjct: 357 AERQLWEMKLVGKHADGDLYDIVLAICASQKEASAVSRLLTRVEVTSSLQKKKTLSWLLR 416
Query: 420 GYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDT 479
GY+KGG ++AAE L KMLD+GL P+Y+DRVAVLQGLRKRIQQ GNVE+YLNLCKRLSD
Sbjct: 417 GYLKGGQYDEAAEALVKMLDMGLCPDYLDRVAVLQGLRKRIQQWGNVESYLNLCKRLSDE 476
Query: 480 SLIGPCLVYLYIKKYKLWIIKML 502
+LIGP LVYLYIKKYKLWI+KML
Sbjct: 477 NLIGPSLVYLYIKKYKLWIMKML 499
>gi|224105911|ref|XP_002313976.1| predicted protein [Populus trichocarpa]
gi|222850384|gb|EEE87931.1| predicted protein [Populus trichocarpa]
Length = 500
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/495 (77%), Positives = 429/495 (86%), Gaps = 10/495 (2%)
Query: 11 LSPNFLLQRHKLLVPQLHGSCLTRPPPRISTRIKNYQNP---SFIATKVSKIREFRFLKS 67
+SP F L++ + SC+ +P +ST I NYQ P +F+ K +K+REFR KS
Sbjct: 13 VSPVFSLKK------RYWNSCM-KPCCMVSTIICNYQTPKRPNFVVAKTTKVREFRLFKS 65
Query: 68 VELDQFVTSDDEDEMSEEFFEAIEELERMTREPSDILEEMNDRLSARELQLVLVYFSQEG 127
VELDQ+VTSDDE+EM E FFEAIEELERMTREPSDILEEMNDRLSARELQLVLVYFSQEG
Sbjct: 66 VELDQYVTSDDEEEMGEGFFEAIEELERMTREPSDILEEMNDRLSARELQLVLVYFSQEG 125
Query: 128 RDSWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGL 187
RDSWCALEVFEWL+KENRVD ETMELMVSIMCSWVKK IE E+ VGDVVDLLVDMDCVGL
Sbjct: 126 RDSWCALEVFEWLRKENRVDKETMELMVSIMCSWVKKLIEGEQDVGDVVDLLVDMDCVGL 185
Query: 188 KPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVE 247
KP FSMIEKVISLYW+M KKE AV FVK VL RGIAY+ DGEGQ+GGPTGYL WKMMV+
Sbjct: 186 KPSFSMIEKVISLYWDMGKKEGAVSFVKEVLRRGIAYSGDDGEGQKGGPTGYLTWKMMVD 245
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G Y +A+KLVIHLRESGLKPE+Y+YLIA+TAVVKELNEF KALRKLKGY R+G + ELD
Sbjct: 246 GNYRNAVKLVIHLRESGLKPEIYAYLIAMTAVVKELNEFSKALRKLKGYSRSGMVTELDA 305
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEM 367
+N+ L+EKYQSDLLADG LSSW IQEG +LYGVVHERLLAMYICAGRGL+AERQLWEM
Sbjct: 306 ENVELVEKYQSDLLADGVCLSSWVIQEGSPALYGVVHERLLAMYICAGRGLDAERQLWEM 365
Query: 368 KLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHI 427
KLVGKEADGDLYDIVLAICASQ E SAV+RLL+RIEV +S+ KKK+LSWLLRGYIKGGH
Sbjct: 366 KLVGKEADGDLYDIVLAICASQKEASAVARLLTRIEVASSMRKKKSLSWLLRGYIKGGHY 425
Query: 428 NDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGPCLV 487
+AAETL KMLDLGL P+Y+DRVAV+QGLRKRIQQ GNVE+YL LCKRLSD +LIGP LV
Sbjct: 426 GEAAETLIKMLDLGLSPDYLDRVAVMQGLRKRIQQWGNVESYLKLCKRLSDVNLIGPSLV 485
Query: 488 YLYIKKYKLWIIKML 502
YLYIKKYKLWI+K+L
Sbjct: 486 YLYIKKYKLWIMKLL 500
>gi|356566020|ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Glycine max]
Length = 508
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/504 (71%), Positives = 423/504 (83%), Gaps = 4/504 (0%)
Query: 1 MASVPELGFALSPNFLLQR--HKLLVPQLHGSCLTRPPPRISTRIKNYQNPSFIATKVSK 58
+A + +LGF S QR H L+ P H + +S R ++NPSF++ K
Sbjct: 7 LAPIFKLGFVFSSVSPSQRKRHPLMFPASHCGFSLKFYGGLSARSCKFKNPSFVSAKHGS 66
Query: 59 IREFRFLKSVELDQFVTSDDEDEMSEEFFEAIEELERMTREPSDILEEMNDRLSARELQL 118
+R FR LKSVE+DQ+VTS+DE MS+ FFEAIEELERMTREPSD+LEEMNDRLSARELQL
Sbjct: 67 LRGFRALKSVEMDQYVTSNDE--MSDGFFEAIEELERMTREPSDVLEEMNDRLSARELQL 124
Query: 119 VLVYFSQEGRDSWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDL 178
VLVYFSQ+GRDSWCALEVF+WL+KENRVD ETMELMV+IMC WVKK I+++ GVGDVVDL
Sbjct: 125 VLVYFSQDGRDSWCALEVFDWLRKENRVDKETMELMVAIMCGWVKKLIQQQHGVGDVVDL 184
Query: 179 LVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTG 238
LVDMDCVGL+PGFSMIEKVISLYWEM +KE AVLFV+ VL RGI Y E D EG +GGPTG
Sbjct: 185 LVDMDCVGLRPGFSMIEKVISLYWEMGEKEGAVLFVEEVLRRGIPYVEEDEEGHKGGPTG 244
Query: 239 YLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVR 298
YLAWKMM EG Y +A++LVI RESGLKPE+YSYL+A+TAVVKELNEF KALRKLKG+ R
Sbjct: 245 YLAWKMMAEGDYRNAVRLVIRFRESGLKPEIYSYLVAMTAVVKELNEFAKALRKLKGFTR 304
Query: 299 AGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGL 358
AG +AELD +++ L EKYQSD LADG RLS+W IQ+G SL+G+VHERLLAMYICAG G+
Sbjct: 305 AGLVAELDLEDVELTEKYQSDTLADGVRLSNWVIQDGSPSLHGIVHERLLAMYICAGHGI 364
Query: 359 EAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLL 418
EAERQLWEMKLVGKEADGDLYDIVLAICASQ E +A +RLL+R+EV++S KKK+LSWLL
Sbjct: 365 EAERQLWEMKLVGKEADGDLYDIVLAICASQKESNATARLLTRLEVVSSPQKKKSLSWLL 424
Query: 419 RGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSD 478
RGYIKGGH N+AAET+ KML+LG YPEY+DR AVLQGLRKRIQQ GN++ Y+ LCK LSD
Sbjct: 425 RGYIKGGHFNEAAETIMKMLELGFYPEYLDRAAVLQGLRKRIQQYGNLDTYVRLCKSLSD 484
Query: 479 TSLIGPCLVYLYIKKYKLWIIKML 502
+LIGPCLV+LYI+KYKLW++KML
Sbjct: 485 ANLIGPCLVHLYIRKYKLWVVKML 508
>gi|356539658|ref|XP_003538312.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Glycine max]
Length = 510
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/508 (70%), Positives = 417/508 (82%), Gaps = 10/508 (1%)
Query: 1 MASVPELGF---ALSPNFLLQRHKLLVPQLH-GSCLTRPPPRISTRIKNYQNPSFIATKV 56
A + +LGF ++SP+ +RH L+ P H G L +S R ++NPSF+ K
Sbjct: 7 FAPIFKLGFVFSSVSPS--QKRHPLVFPASHCGYSLKFYDGVLSARSCKFKNPSFV--KQ 62
Query: 57 SKIREFRFLKSVELDQFVTSDDE-DEMSEEFFEAIEELERMTREPSDILEEMNDRLSARE 115
IR FR LKSVELDQ+VTSDDE DEMS+ FFEAIEELERMTREPSD+LEEMNDRLSARE
Sbjct: 63 GSIRGFRALKSVELDQYVTSDDEEDEMSDGFFEAIEELERMTREPSDVLEEMNDRLSARE 122
Query: 116 LQLVLVYFSQEGRDSWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDV 175
LQLVLVYFSQ+GRDSWCALEVF+WL+KENRVD ETMELMV+IMC WVKK I+E GV
Sbjct: 123 LQLVLVYFSQDGRDSWCALEVFDWLRKENRVDKETMELMVAIMCGWVKKLIQEHHGVVGD 182
Query: 176 VDLLVD-MDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQG 234
V L+ MDCVGL+PGFSMIEKVISLYWEM +KE AVLFV+ VL RGI Y E D EG +G
Sbjct: 183 VVDLLVDMDCVGLRPGFSMIEKVISLYWEMGEKEGAVLFVEEVLRRGIPYLEEDEEGHKG 242
Query: 235 GPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLK 294
GPTGYLAWKMM EG Y A++LVIH ESGLKPEVYSYL+A+TAVVKELNE KALRKLK
Sbjct: 243 GPTGYLAWKMMAEGDYTSAVRLVIHFTESGLKPEVYSYLVAMTAVVKELNELAKALRKLK 302
Query: 295 GYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICA 354
+ R G +AELD +++ L EKYQSDLL DG RLS+WAIQ+G SL+G++HERLLAMYICA
Sbjct: 303 SFARTGLVAELDLEDVELTEKYQSDLLGDGVRLSNWAIQDGSPSLHGIIHERLLAMYICA 362
Query: 355 GRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
G G+EAE+QLWEMKLVGKEADGDLYDIVLAICASQ E +A +RLL+R+EV +S KKK+L
Sbjct: 363 GHGIEAEKQLWEMKLVGKEADGDLYDIVLAICASQKESNATARLLTRLEVASSPQKKKSL 422
Query: 415 SWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCK 474
SWLLRGYIKGGH N+AAET+ KMLDLG YPEY+DR AVLQGLRKRIQQ GN++ Y+ LCK
Sbjct: 423 SWLLRGYIKGGHFNEAAETIMKMLDLGFYPEYLDRAAVLQGLRKRIQQYGNLDTYVRLCK 482
Query: 475 RLSDTSLIGPCLVYLYIKKYKLWIIKML 502
LSD +LIGPCLV+LYI+KYKLW++KML
Sbjct: 483 SLSDANLIGPCLVHLYIRKYKLWVVKML 510
>gi|449523569|ref|XP_004168796.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g30100, chloroplastic-like [Cucumis sativus]
Length = 501
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/496 (69%), Positives = 406/496 (81%), Gaps = 9/496 (1%)
Query: 7 LGFALSPNFLLQRHKLLVPQLHGSCLTRPPPRISTRIKNYQNPSFIATKVSKIREFRFLK 66
F+LS QR P+L+ +S NYQ+ +F ++ +K R+ R K
Sbjct: 15 FSFSLSSPLESQRCGFSTPRLY---------MVSPISCNYQDSTFSVSRAAKFRDLRLFK 65
Query: 67 SVELDQFVTSDDEDEMSEEFFEAIEELERMTREPSDILEEMNDRLSARELQLVLVYFSQE 126
SVELDQF+TSDDEDEM + FFEAIEELERMTREPSD+LEEMNDRLSARE+QLVLVYFSQE
Sbjct: 66 SVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLSAREIQLVLVYFSQE 125
Query: 127 GRDSWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVG 186
GRDSWCALEVFEWL+KENRVD ETMELMVSIMCSW+KK +E VGDVVDLLVDMDCVG
Sbjct: 126 GRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGRHNVGDVVDLLVDMDCVG 185
Query: 187 LKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMV 246
LKP FSMIEKVISLYWEM +KE+AV FVK VL R +A+ + D EG +GGP+GYLAWKMMV
Sbjct: 186 LKPHFSMIEKVISLYWEMGEKEKAVFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMV 245
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
+G Y A+K+V+HLRESGL+PEVYSYLIA+TAVVKELNEF KALRKLKGY R G +AELD
Sbjct: 246 DGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKGYARDGFVAELD 305
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
N+ L+ KYQ++LLADG +LS+W ++EG SS+ GVVHERLLAMYICAG+G+EAERQLWE
Sbjct: 306 KNNVELVAKYQTELLADGVQLSNWVLEEGSSSIRGVVHERLLAMYICAGQGVEAERQLWE 365
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
MKLVGKEAD DLYDIVLAICASQ E A+ RLL+RIE+ + + KKK+L+WLLRGYIKGGH
Sbjct: 366 MKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGH 425
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGPCL 486
DAA TL KM++LG PEY+DRVAVLQGL K I++ +V YL+LCK LSD +LIGP L
Sbjct: 426 FRDAAGTLVKMINLGFLPEYLDRVAVLQGLXKEIREPESVHTYLDLCKCLSDANLIGPSL 485
Query: 487 VYLYIKKYKLWIIKML 502
VYL+++K+KLWIIKML
Sbjct: 486 VYLHLQKHKLWIIKML 501
>gi|449450940|ref|XP_004143220.1| PREDICTED: uncharacterized protein LOC101207176 [Cucumis sativus]
Length = 1290
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/485 (68%), Positives = 392/485 (80%), Gaps = 9/485 (1%)
Query: 7 LGFALSPNFLLQRHKLLVPQLHGSCLTRPPPRISTRIKNYQNPSFIATKVSKIREFRFLK 66
F+LS QR P+L+ +S NYQ+ +F ++ +K R+ R K
Sbjct: 15 FSFSLSSPLESQRCGFSTPRLY---------MVSPISCNYQDSTFSVSRAAKFRDLRLFK 65
Query: 67 SVELDQFVTSDDEDEMSEEFFEAIEELERMTREPSDILEEMNDRLSARELQLVLVYFSQE 126
SVELDQF+TSDDEDEM + FFEAIEELERMTREPSD+LEEMNDRLSARE+QLVLVYFSQE
Sbjct: 66 SVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLSAREIQLVLVYFSQE 125
Query: 127 GRDSWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVG 186
GRDSWCALEVFEWL+KENRVD ETMELMVSIMCSW+KK +E VGDVVDLLVDMDCVG
Sbjct: 126 GRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGRHNVGDVVDLLVDMDCVG 185
Query: 187 LKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMV 246
LKP FSMIEKVISLYWEM +KE+AV FVK VL R +A+ + D EG +GGP+GYLAWKMMV
Sbjct: 186 LKPHFSMIEKVISLYWEMGEKEKAVFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMV 245
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
+G Y A+K+V+HLRESGL+PEVYSYLIA+TAVVKELNEF KALRKLKGY R G +AELD
Sbjct: 246 DGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKGYARDGFVAELD 305
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
N+ L+ KYQ++LLADG +LS+W ++EG SS+ GVVHERLLAMYICAG+G+EAERQLWE
Sbjct: 306 KNNVELVAKYQTELLADGVQLSNWVLEEGSSSIRGVVHERLLAMYICAGQGVEAERQLWE 365
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
MKLVGKEAD DLYDIVLAICASQ E A+ RLL+RIE+ + + KKK+L+WLLRGYIKGGH
Sbjct: 366 MKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGH 425
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGPCL 486
DAA TL KM++LG PEY+DRVAVLQGLRK I++ +V YL+LCK LSD +LIGP L
Sbjct: 426 FRDAAGTLVKMINLGFLPEYLDRVAVLQGLRKEIREPESVHTYLDLCKCLSDANLIGPSL 485
Query: 487 VYLYI 491
+
Sbjct: 486 TRFLV 490
>gi|334184571|ref|NP_180571.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546771|sp|Q0WNN7.2|PP176_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g30100, chloroplastic; Flags: Precursor
gi|330253250|gb|AEC08344.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 503
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 313/492 (63%), Positives = 380/492 (77%), Gaps = 20/492 (4%)
Query: 23 LVPQLHGSCLTRPPPRISTRIK-NYQNPSFIATKVSKIREFRFLKSVELDQFVTSDDEDE 81
+P+LH + +P RI +K NY K RE +SVELDQF+TS++E+
Sbjct: 20 FLPRLHRNHSVKPNSRIICNLKLNYS--------AGKFREMGLSRSVELDQFITSEEEEG 71
Query: 82 MSEE----FFEAIEELERMTREPSDILEEMNDRLSARELQLVLVYFSQEGRDSWCALEVF 137
+EE FFEAIEELERMTREPSDILEEMN RLS+RELQL+LVYF+QEGRDSWC LEVF
Sbjct: 72 EAEEIGEGFFEAIEELERMTREPSDILEEMNHRLSSRELQLMLVYFAQEGRDSWCTLEVF 131
Query: 138 EWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKV 197
EWLKKENRVD E MELMVSIMC WVKK IE+E V DLL++MDCVGLKPGFSM++KV
Sbjct: 132 EWLKKENRVDEEIMELMVSIMCGWVKKLIEDECNAHQVFDLLIEMDCVGLKPGFSMMDKV 191
Query: 198 ISLYWEMEKKERAVLFVKAVLSR-----GIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVD 252
I+LY EM KKE AVLFVK VL R G EG++GGP GYLAWK MV+G Y
Sbjct: 192 IALYCEMGKKESAVLFVKEVLRRRDGFGYSVVGGGGSEGRKGGPVGYLAWKFMVDGDYRK 251
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGL 312
A+ +V+ LR SGLKPE YSYLIA+TA+VKELN GK LR+LK + RAG +AE+D + L
Sbjct: 252 AVDMVMELRLSGLKPEAYSYLIAMTAIVKELNSLGKTLRELKRFARAGFVAEIDDHDRVL 311
Query: 313 IEKYQSDLLADGSRLSSWAIQEG--GSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLV 370
IEKYQS+ L+ G +L++WA++EG S+ GVVHERLLAMYICAGRG EAE+QLW+MKL
Sbjct: 312 IEKYQSETLSRGLQLATWAVEEGQENDSIIGVVHERLLAMYICAGRGPEAEKQLWKMKLA 371
Query: 371 GKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDA 430
G+E + DL+DIV+AICASQ E +AVSRLL+R+E M S KKKTLSWLLRGY+KGGH +A
Sbjct: 372 GREPEADLHDIVMAICASQKEVNAVSRLLTRVEFMGSQRKKKTLSWLLRGYVKGGHFEEA 431
Query: 431 AETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGPCLVYLY 490
AETL M+D GL+PEY+DRVAV+QG+ ++IQ+ +VEAY++LCKRL D L+GPCLVY+Y
Sbjct: 432 AETLVSMIDSGLHPEYIDRVAVMQGMTRKIQRPRDVEAYMSLCKRLFDAGLVGPCLVYMY 491
Query: 491 IKKYKLWIIKML 502
I KYKLWI+KM+
Sbjct: 492 IDKYKLWIVKMM 503
>gi|297745858|emb|CBI15914.3| unnamed protein product [Vitis vinifera]
Length = 411
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 286/381 (75%), Positives = 314/381 (82%), Gaps = 28/381 (7%)
Query: 107 MNDRLSARELQLVLVYFSQEGRDSWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYI 166
MNDRLSARELQLVLVYFSQEGRDSWCALE K I
Sbjct: 1 MNDRLSARELQLVLVYFSQEGRDSWCALE----------------------------KLI 32
Query: 167 EEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAE 226
E E VGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEME+KE+AVLFVK VL R IAY+E
Sbjct: 33 EGEHDVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEEKEKAVLFVKEVLRREIAYSE 92
Query: 227 GDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEF 286
DG+G +GGPTGYLAWKMM EG Y A+KLVIHLRESGLKPEVYSYLIA+TAVVKELNEF
Sbjct: 93 DDGDGHKGGPTGYLAWKMMAEGNYRGAVKLVIHLRESGLKPEVYSYLIAMTAVVKELNEF 152
Query: 287 GKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHER 346
KALRKLKG+ ++G IAELD +N+ LIEKYQSDLLADG RLSSW IQEG S L+GVV+ER
Sbjct: 153 AKALRKLKGFTKSGLIAELDAENVELIEKYQSDLLADGVRLSSWVIQEGRSPLHGVVYER 212
Query: 347 LLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMN 406
LLAMYICAGRGLEAERQLWEMKLVGKEAD +LYDIVLAICAS+ E SA+SRLL+ +EV +
Sbjct: 213 LLAMYICAGRGLEAERQLWEMKLVGKEADRELYDIVLAICASKKEASAISRLLTGMEVTS 272
Query: 407 SLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNV 466
S+ +KKTLSWLLRGYIKG H +DA+ET+ KMLDLGL PEY+DR AVLQGLR RIQQ+GNV
Sbjct: 273 SIRRKKTLSWLLRGYIKGSHFDDASETIIKMLDLGLCPEYLDRAAVLQGLRNRIQQTGNV 332
Query: 467 EAYLNLCKRLSDTSLIGPCLV 487
E YL LCK LSD +LIGPCL
Sbjct: 333 ETYLKLCKHLSDANLIGPCLT 353
>gi|3150410|gb|AAC16962.1| putative unknown protein, leucine-rich repeat [Arabidopsis
thaliana]
Length = 902
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 297/471 (63%), Positives = 360/471 (76%), Gaps = 20/471 (4%)
Query: 23 LVPQLHGSCLTRPPPRISTRIK-NYQNPSFIATKVSKIREFRFLKSVELDQFVTSDDEDE 81
+P+LH + +P RI +K NY K RE +SVELDQF+TS++E+
Sbjct: 20 FLPRLHRNHSVKPNSRIICNLKLNYS--------AGKFREMGLSRSVELDQFITSEEEEG 71
Query: 82 MSEE----FFEAIEELERMTREPSDILEEMNDRLSARELQLVLVYFSQEGRDSWCALEVF 137
+EE FFEAIEELERMTREPSDILEEMN RLS+RELQL+LVYF+QEGRDSWC LEVF
Sbjct: 72 EAEEIGEGFFEAIEELERMTREPSDILEEMNHRLSSRELQLMLVYFAQEGRDSWCTLEVF 131
Query: 138 EWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKV 197
EWLKKENRVD E MELMVSIMC WVKK IE+E V DLL++MDCVGLKPGFSM++KV
Sbjct: 132 EWLKKENRVDEEIMELMVSIMCGWVKKLIEDECNAHQVFDLLIEMDCVGLKPGFSMMDKV 191
Query: 198 ISLYWEMEKKERAVLFVKAVLSR-----GIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVD 252
I+LY EM KKE AVLFVK VL R G EG++GGP GYLAWK MV+G Y
Sbjct: 192 IALYCEMGKKESAVLFVKEVLRRRDGFGYSVVGGGGSEGRKGGPVGYLAWKFMVDGDYRK 251
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGL 312
A+ +V+ LR SGLKPE YSYLIA+TA+VKELN GK LR+LK + RAG +AE+D + L
Sbjct: 252 AVDMVMELRLSGLKPEAYSYLIAMTAIVKELNSLGKTLRELKRFARAGFVAEIDDHDRVL 311
Query: 313 IEKYQSDLLADGSRLSSWAIQEG--GSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLV 370
IEKYQS+ L+ G +L++WA++EG S+ GVVHERLLAMYICAGRG EAE+QLW+MKL
Sbjct: 312 IEKYQSETLSRGLQLATWAVEEGQENDSIIGVVHERLLAMYICAGRGPEAEKQLWKMKLA 371
Query: 371 GKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDA 430
G+E + DL+DIV+AICASQ E +AVSRLL+R+E M S KKKTLSWLLRGY+KGGH +A
Sbjct: 372 GREPEADLHDIVMAICASQKEVNAVSRLLTRVEFMGSQRKKKTLSWLLRGYVKGGHFEEA 431
Query: 431 AETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSL 481
AETL M+D GL+PEY+DRVAV+QG+ ++IQ+ +VEAY++LCKRL D L
Sbjct: 432 AETLVSMIDSGLHPEYIDRVAVMQGMTRKIQRPRDVEAYMSLCKRLFDAGL 482
>gi|297822733|ref|XP_002879249.1| ubiquitin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297325088|gb|EFH55508.1| ubiquitin family protein [Arabidopsis lyrata subsp. lyrata]
Length = 900
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 299/474 (63%), Positives = 364/474 (76%), Gaps = 23/474 (4%)
Query: 25 PQLHGSCLTRPPPRI--STRIKNYQNPSFIATKVSKIREFRFL-KSVELDQFVTSDDEDE 81
P+LH + +P RI NY K RE L +SVELDQF+TS++E+E
Sbjct: 24 PRLHRNHSVKPNSRIIICNLKSNYS--------AGKFRELGGLSRSVELDQFITSEEEEE 75
Query: 82 MSEE----FFEAIEELERMTREPSDILEEMNDRLSARELQLVLVYFSQEGRDSWCALEVF 137
+EE FFEAIEELERMTREPSDILEEMN RLS+RELQL+LVYF+QEGRDSWC LEVF
Sbjct: 76 EAEEIGEGFFEAIEELERMTREPSDILEEMNHRLSSRELQLMLVYFAQEGRDSWCTLEVF 135
Query: 138 EWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKV 197
EWLKKENRVD E MELMVSIMC WVKK I+EE V DLL++MDCVGLKPGFSM+EKV
Sbjct: 136 EWLKKENRVDEEIMELMVSIMCGWVKKLIQEECDAHQVFDLLIEMDCVGLKPGFSMMEKV 195
Query: 198 ISLYWEMEKKERAVLFVKAVLSR----GIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVDA 253
I+LY EM KKE AVLFV+ VL R G + G EG++GGP GYLAWK+MV+G Y A
Sbjct: 196 IALYCEMGKKESAVLFVREVLRRRDGFGYSVVGGGSEGRKGGPVGYLAWKLMVDGDYKKA 255
Query: 254 IKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLI 313
+ +V+ LR SGLKPE YSYLIA+TA+VKELN GK LR+LK + RAG +AE+D + LI
Sbjct: 256 VDMVMELRLSGLKPEAYSYLIAMTAIVKELNSLGKTLRELKRFTRAGFVAEIDDHDRVLI 315
Query: 314 EKYQSDLLADGSRLSSWAIQEG--GSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVG 371
EKYQS+ L+ G +L++WA++EG S+ GVVHERLLAMYICAGRG EAE+QLW+MKL G
Sbjct: 316 EKYQSETLSRGLQLATWAVEEGQENDSIIGVVHERLLAMYICAGRGPEAEKQLWKMKLAG 375
Query: 372 KEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAA 431
+E + DL+DIV+AICASQ E +AVSRLL+R+E M S KKKTLSWLLRGY+KGGH +AA
Sbjct: 376 REPEADLHDIVMAICASQKEVNAVSRLLTRVEFMGSQRKKKTLSWLLRGYVKGGHFEEAA 435
Query: 432 ETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGPC 485
ETL M+D GL+PEY+DRVAV+QG+ ++IQ+ +V+AY++LCKRL D + PC
Sbjct: 436 ETLVSMIDSGLHPEYIDRVAVMQGMTRKIQRPRDVKAYMSLCKRLFDADI--PC 487
>gi|357134092|ref|XP_003568652.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Brachypodium distachyon]
Length = 472
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 260/471 (55%), Positives = 343/471 (72%), Gaps = 8/471 (1%)
Query: 39 ISTRIKNYQNPSFIATK----VSKIREFRFLKSVELDQFVTSDDED---EMSEEFFEAIE 91
+S+R + S + + +R L+S+ LD + +D + AIE
Sbjct: 3 LSSRAAAFPQVSLPSPRPRPAAVSLRPPSPLRSLRLDHVIPADATELGVGGGGPLAAAIE 62
Query: 92 ELERMTREPSDILEEMNDRLSARELQLVLVYFSQEGRDSWCALEVFEWLKKENRVDNETM 151
LER +D +++ LS RELQLVLVYF+QEGRD++CALEVF+WL++ NRVD ETM
Sbjct: 63 HLEREPAAAADDRAPLSE-LSPRELQLVLVYFAQEGRDAYCALEVFDWLRRANRVDGETM 121
Query: 152 ELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAV 211
ELM +I C W+++ + V DV LL +MDCVGL+PGFS++EK ++LYW+ ++ RAV
Sbjct: 122 ELMAAIACGWIERLVGAGGDVADVSALLGEMDCVGLRPGFSLVEKAVALYWDRSERARAV 181
Query: 212 LFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYS 271
FV+ VL RG GD +G++GGP GYLAWKMM++G Y DA KLVI +ESGL PEVY
Sbjct: 182 EFVRDVLRRGNVGVGGDFDGERGGPVGYLAWKMMMDGDYRDAFKLVIEFKESGLNPEVYG 241
Query: 272 YLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWA 331
YLI LT++VKE EF KALRKL V+ GS++ELD +++ IEKYQS+LL DG LS WA
Sbjct: 242 YLIGLTSLVKEQKEFSKALRKLNFSVKDGSVSELDTESMHSIEKYQSELLRDGVLLSKWA 301
Query: 332 IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNE 391
+QEG S + G+VHERLL+MY CAG GLEAER+LWEMKLVG+ D LYD+VLAICASQ E
Sbjct: 302 VQEGSSEVLGLVHERLLSMYTCAGCGLEAERELWEMKLVGRPPDTQLYDVVLAICASQGE 361
Query: 392 GSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVA 451
G+AV RLL+ IE ++ +KK++SWLLRGY+KGG DA+ETL +MLDLGL PEY+DR A
Sbjct: 362 GAAVRRLLAGIESTSAGRRKKSMSWLLRGYVKGGFYLDASETLMRMLDLGLCPEYLDRAA 421
Query: 452 VLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGPCLVYLYIKKYKLWIIKML 502
VL L++ IQQSGN+E+Y+ LCKRLS+T +IGPC++YLY++K+KLW++ ML
Sbjct: 422 VLTALQRNIQQSGNLESYMKLCKRLSETDMIGPCVIYLYVRKFKLWMMHML 472
>gi|308080872|ref|NP_001183368.1| uncharacterized protein LOC100501779 [Zea mays]
gi|238011044|gb|ACR36557.1| unknown [Zea mays]
gi|413945128|gb|AFW77777.1| hypothetical protein ZEAMMB73_817695 [Zea mays]
Length = 490
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/423 (58%), Positives = 325/423 (76%), Gaps = 12/423 (2%)
Query: 89 AIEELERMTREPSDIL--EEMNDRLSARELQLVLVYFSQEGRDSWCALEVFEWLKKENRV 146
AIE LER EP+ + E LS RELQLVLVYF+QEGRD++CALEVF+WL++ NRV
Sbjct: 71 AIEHLER---EPASVAADEAPLAALSPRELQLVLVYFAQEGRDTYCALEVFDWLRRANRV 127
Query: 147 DNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEK 206
D ETMELM +I C W+++ + V DV LL +MDCVGL+PGFS++EK ++LYW+ +
Sbjct: 128 DGETMELMAAIACGWIERLVGAGGDVADVAALLGEMDCVGLRPGFSLVEKAVALYWDRGE 187
Query: 207 KERAVLFVKAVLSRGIA-------YAEGDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIH 259
KE AV FV+ VL RG ++ G+G++GGP GYLAWKMM++G Y +A+KLVI
Sbjct: 188 KELAVEFVRDVLRRGGLGAGAGGEHSSASGDGERGGPVGYLAWKMMMDGDYRNAVKLVIE 247
Query: 260 LRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSD 319
+E+GLKPEVYSYLI LTA+VKE EF KALR+L V+ GSI++LD +++ I KYQSD
Sbjct: 248 FKETGLKPEVYSYLIGLTALVKEQKEFSKALRRLNASVKDGSISKLDAESMHSINKYQSD 307
Query: 320 LLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLY 379
LL+DG LS+W +QEG S + G+V ERLL++Y CAG GLEAE QLWEMKL+G+E D LY
Sbjct: 308 LLSDGVLLSNWVVQEGSSEVLGLVRERLLSLYTCAGCGLEAEHQLWEMKLLGREPDTQLY 367
Query: 380 DIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLD 439
D+VLAICASQ E +AV RLL+ +E ++ +KK++SWLLRGY+KGG I DA+ETL +MLD
Sbjct: 368 DVVLAICASQGEAAAVRRLLAGVESTSAGRRKKSMSWLLRGYVKGGFILDASETLIQMLD 427
Query: 440 LGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGPCLVYLYIKKYKLWII 499
+GL P+Y+DR AVL LR+ IQ+SG++E+YL LCKRLS+T LIGPC+VYLY++K+KLW+
Sbjct: 428 MGLLPDYLDRAAVLTALRRNIQESGSLESYLKLCKRLSETDLIGPCIVYLYVRKFKLWMA 487
Query: 500 KML 502
ML
Sbjct: 488 HML 490
>gi|326527885|dbj|BAJ88994.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 470
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/392 (60%), Positives = 311/392 (79%)
Query: 111 LSARELQLVLVYFSQEGRDSWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEER 170
LS RELQLVLVYF+QEGRD++CALEVF+WL++ +RVD ETMELM +I C W+++ +
Sbjct: 79 LSPRELQLVLVYFAQEGRDAYCALEVFDWLRRADRVDGETMELMTAIACGWIERLVGAGG 138
Query: 171 GVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGE 230
V DV LL +MDCVGL+PGFS++EK ++LYW+ ++ RAV FV+ VL RG G+ +
Sbjct: 139 DVSDVSALLGEMDCVGLRPGFSLVEKAVALYWDRSERARAVEFVRDVLRRGSVATGGEYD 198
Query: 231 GQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKAL 290
G++GGP GYLAWK+M++G Y DA+ LVI +ESGLKPEVYSYLI LTA+VKE EF KAL
Sbjct: 199 GERGGPVGYLAWKIMMDGDYRDAVNLVIEFKESGLKPEVYSYLIGLTALVKEQKEFSKAL 258
Query: 291 RKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAM 350
RKL V+ GSIA+LD +++ IEKYQS LL DG LS+WA+QEG S + G+VHERLL++
Sbjct: 259 RKLNLSVKDGSIAKLDAESMRNIEKYQSKLLGDGVLLSNWAVQEGSSEVLGLVHERLLSL 318
Query: 351 YICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCK 410
Y CAG GLEAE QLWE+KLVG+E D LYD+VLAICASQ E +AV RLL+ +E ++ +
Sbjct: 319 YTCAGCGLEAEHQLWELKLVGREPDTQLYDVVLAICASQGETAAVRRLLAGVESTSAGRR 378
Query: 411 KKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYL 470
KK++SWLLRGY+KGG DA+ TL MLD+GL P+Y+DR AVL L+++IQ+ GN+E+Y+
Sbjct: 379 KKSMSWLLRGYLKGGFYLDASATLMWMLDMGLCPDYLDRAAVLAALQRKIQEPGNLESYM 438
Query: 471 NLCKRLSDTSLIGPCLVYLYIKKYKLWIIKML 502
LCKRLS+T LI PC+VYLY++K+KLW+++ML
Sbjct: 439 KLCKRLSETDLIAPCVVYLYVRKFKLWMMRML 470
>gi|115463363|ref|NP_001055281.1| Os05g0353300 [Oryza sativa Japonica Group]
gi|55168009|gb|AAV43877.1| unknown protein [Oryza sativa Japonica Group]
gi|113578832|dbj|BAF17195.1| Os05g0353300 [Oryza sativa Japonica Group]
Length = 488
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/397 (59%), Positives = 308/397 (77%), Gaps = 8/397 (2%)
Query: 114 RELQLVLVYFSQEGRDSWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVG 173
RELQLVLVYF+QEGRD++CALEVF+WL++ NRVD ETMELM +I C W+++ + V
Sbjct: 92 RELQLVLVYFAQEGRDAYCALEVFDWLRRANRVDGETMELMAAIACGWIERLVGGGGDVA 151
Query: 174 DVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGD----- 228
DV LL +MDCVGL+PGFS++EK ++LYW+ + AV FV+ VL RG
Sbjct: 152 DVAALLGEMDCVGLRPGFSLVEKAVALYWDRGDRGSAVDFVRDVLRRGGVGVGVGDGGEY 211
Query: 229 ---GEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNE 285
+G++GGP GYLAW+MM++G Y DA+KL+I +ESGL+PEVYSYLI LTA+VKE E
Sbjct: 212 GGASDGERGGPVGYLAWRMMMDGDYRDAVKLIIEFKESGLQPEVYSYLIGLTALVKEQKE 271
Query: 286 FGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHE 345
F KALRKL V+ GSI++LD + + IE YQS+LL+DG LS WAI+EG S + G+VHE
Sbjct: 272 FSKALRKLNSSVKVGSISKLDSETMHSIENYQSELLSDGVLLSKWAIEEGSSDVLGLVHE 331
Query: 346 RLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVM 405
RLL++Y CAG GLEAE QLWEMKL+G+E D LYD+VLAICASQ E +AV RLL+ +E
Sbjct: 332 RLLSLYTCAGCGLEAEHQLWEMKLLGREPDTQLYDVVLAICASQGEVAAVRRLLAGVEST 391
Query: 406 NSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGN 465
++ +KK+LSWLLRGY+KGG +A+ETL KMLD+GLYPEY+DR AVL LR+ IQ+SG+
Sbjct: 392 SAGRRKKSLSWLLRGYVKGGFYLEASETLMKMLDMGLYPEYLDRAAVLTALRRNIQESGS 451
Query: 466 VEAYLNLCKRLSDTSLIGPCLVYLYIKKYKLWIIKML 502
+E+Y+ LCKRLS+T LIGPC++YLY++K+KLW++ ML
Sbjct: 452 LESYMKLCKRLSETDLIGPCVIYLYVRKFKLWMMHML 488
>gi|242090171|ref|XP_002440918.1| hypothetical protein SORBIDRAFT_09g016480 [Sorghum bicolor]
gi|241946203|gb|EES19348.1| hypothetical protein SORBIDRAFT_09g016480 [Sorghum bicolor]
Length = 359
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/359 (58%), Positives = 282/359 (78%), Gaps = 7/359 (1%)
Query: 151 MELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERA 210
MELM +I C W+++ + V DV LL +MDCVGL+PGFS++EK ++LYW+ ++E A
Sbjct: 1 MELMAAIACGWIERLVGAGGDVADVAALLGEMDCVGLRPGFSLVEKAVALYWDRGERELA 60
Query: 211 VLFVKAVLSRGIA-------YAEGDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRES 263
V FV+ VL RG ++ +G+G++GGP GYLAWKMM++G Y +A+KLVI +E+
Sbjct: 61 VEFVRDVLRRGGLGAAAGGEHSSANGDGERGGPVGYLAWKMMMDGDYRNAVKLVIEFKET 120
Query: 264 GLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLAD 323
GLKPEVYSYLI LTA+VKE EF KALR+L V+ GSI++LD +++ IEKYQSDLL+D
Sbjct: 121 GLKPEVYSYLIGLTALVKEQKEFSKALRRLNSSVKDGSISKLDAESMHSIEKYQSDLLSD 180
Query: 324 GSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL 383
G LS+WA+QEG S + G+VHERLL++Y CAG GLEAE QLWEMKL+G+E D LYD+VL
Sbjct: 181 GVLLSNWAVQEGSSEVLGLVHERLLSLYTCAGCGLEAEHQLWEMKLLGREPDTQLYDVVL 240
Query: 384 AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLY 443
AICASQ E +AV RLL+ +E ++ +KK++SWLLRGY+KGG I DA+ETL +MLD+GL+
Sbjct: 241 AICASQGEAAAVRRLLAGVESTSAGRRKKSMSWLLRGYVKGGFILDASETLIQMLDMGLF 300
Query: 444 PEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGPCLVYLYIKKYKLWIIKML 502
P+Y+DR AVL LR+ IQ+SG++E+YL LCKRLS+T LIGPC+VYLY++K+KLW+ ML
Sbjct: 301 PDYLDRAAVLTALRRNIQESGSLESYLKLCKRLSETDLIGPCIVYLYVRKFKLWMAHML 359
>gi|222632527|gb|EEE64659.1| hypothetical protein OsJ_19513 [Oryza sativa Japonica Group]
Length = 460
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/397 (55%), Positives = 285/397 (71%), Gaps = 36/397 (9%)
Query: 114 RELQLVLVYFSQEGRDSWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVG 173
RELQLVLVYF+QEGRD++CALE + + V
Sbjct: 92 RELQLVLVYFAQEGRDAYCALE----------------------------RLVGGGGDVA 123
Query: 174 DVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGD----- 228
DV LL +MDCVGL+PGFS++EK ++LYW+ + AV FV+ VL RG
Sbjct: 124 DVAALLGEMDCVGLRPGFSLVEKAVALYWDRGDRGSAVDFVRDVLRRGGVGVGVGDGGEY 183
Query: 229 ---GEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNE 285
+G++GGP GYLAW+MM++G Y DA+KL+I +ESGL+PEVYSYLI LTA+VKE E
Sbjct: 184 GGASDGERGGPVGYLAWRMMMDGDYRDAVKLIIEFKESGLQPEVYSYLIGLTALVKEQKE 243
Query: 286 FGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHE 345
F KALRKL V+ GSI++LD + + IE YQS+LL+DG LS WAI+EG S + G+VHE
Sbjct: 244 FSKALRKLNSSVKVGSISKLDSETMHSIENYQSELLSDGVLLSKWAIEEGSSDVLGLVHE 303
Query: 346 RLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVM 405
RLL++Y CAG GLEAE QLWEMKL+G+E D LYD+VLAICASQ E +AV RLL+ +E
Sbjct: 304 RLLSLYTCAGCGLEAEHQLWEMKLLGREPDTQLYDVVLAICASQGEVAAVRRLLAGVEST 363
Query: 406 NSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGN 465
++ +KK+LSWLLRGY+KGG +A+ETL KMLD+GLYPEY+DR AVL LR+ IQ+SG+
Sbjct: 364 SAGRRKKSLSWLLRGYVKGGFYLEASETLMKMLDMGLYPEYLDRAAVLTALRRNIQESGS 423
Query: 466 VEAYLNLCKRLSDTSLIGPCLVYLYIKKYKLWIIKML 502
+E+Y+ LCKRLS+T LIGPC++YLY++K+KLW++ ML
Sbjct: 424 LESYMKLCKRLSETDLIGPCVIYLYVRKFKLWMMHML 460
>gi|116789479|gb|ABK25261.1| unknown [Picea sitchensis]
Length = 515
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/430 (50%), Positives = 297/430 (69%), Gaps = 12/430 (2%)
Query: 80 DEMSEE-----FFEAIEELERMTREPSDILEEMNDR--LSARELQLVLVYFSQEGRDSWC 132
+E +EE F EAI +LERMTR+P DILEEM + LS R+LQLVLVYFSQEGRDSWC
Sbjct: 91 EEFTEEQSKGGFSEAIVQLERMTRDPDDILEEMQKQKQLSTRDLQLVLVYFSQEGRDSWC 150
Query: 133 ALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFS 192
ALEVF+W+++ ++VD+ETMELM+SIM SW+ K EEE V +V LL +M CVGLKP +
Sbjct: 151 ALEVFDWMRRGDKVDDETMELMLSIMASWLNKLAEEEHSVEEVQCLLREMKCVGLKPDYD 210
Query: 193 MIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVD 252
M++K+IS+YW+ K AV FVK +L G A E E + P +L WKM ++G+Y +
Sbjct: 211 MVKKMISMYWDKGKMSEAVQFVKYLLQTGRAVTE---EEKDQDPANHLMWKMSMDGEYKE 267
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGL 312
A++L+ LR GLKP++YSY+ A +V E +F +A+++LK + G + E + +L L
Sbjct: 268 AVELLFELRNCGLKPKIYSYVTASVTLVMEQIQFTRAVQELKAFRNKGKVGEFEAGDLEL 327
Query: 313 IEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGK 372
++ YQ +L G +++ WAI+E GV+HE+LLAMY A RG+EAE LW+MKL G+
Sbjct: 328 LDAYQRNLHEKGEQIAKWAIEENAPDFMGVIHEKLLAMYTVAVRGIEAEHHLWQMKLAGR 387
Query: 373 EADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAE 432
E + YD VLA+CA + AV RL++ +E + KKT SWL+ GY+KG H +AA+
Sbjct: 388 EPSTETYDRVLAVCAVEKNLLAVGRLMAGMEAVGKPPSKKTFSWLVHGYVKGEHFEEAAK 447
Query: 433 TLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGPCLVYLYIK 492
TL KMLD GLYPE ++ VL+GL+K +Q++G+ E YL +CKRLSD LI PCL+Y+YI
Sbjct: 448 TLIKMLDKGLYPEKLEITMVLKGLQKSLQKTGHPELYLKICKRLSDAGLIEPCLIYMYIN 507
Query: 493 KYKLWIIKML 502
KL II+ML
Sbjct: 508 --KLCIIRML 515
>gi|125551958|gb|EAY97667.1| hypothetical protein OsI_19589 [Oryza sativa Indica Group]
Length = 355
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/351 (57%), Positives = 265/351 (75%), Gaps = 8/351 (2%)
Query: 151 MELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERA 210
MELM +I C W+++ + V DV LL +MDCVGL+PGFS++EK ++LYW+ + A
Sbjct: 1 MELMAAIACGWIERLVGGGGDVADVAALLGEMDCVGLRPGFSLVEKAVALYWDRGDRGSA 60
Query: 211 VLFVKAVLSRGIAYAEGD--------GEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRE 262
V FV+ VL RG +G++GGP GYLAW+MM++G Y DA+KL+I +E
Sbjct: 61 VDFVRDVLRRGGVGVGVGDGGEYGGASDGERGGPVGYLAWRMMMDGDYRDAVKLIIEFKE 120
Query: 263 SGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLA 322
SGL+PEVYSYLI LTA+VKE EF KALRKL V+ GSI++LD + + IE YQS+LL+
Sbjct: 121 SGLQPEVYSYLIGLTALVKEQKEFSKALRKLNSSVKEGSISKLDSETMHSIENYQSELLS 180
Query: 323 DGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIV 382
DG LS WAI+EG S + G+VHERLL++Y CAG GLEAE QLWEMKL+G+E D LYD+V
Sbjct: 181 DGVLLSKWAIEEGSSDVLGLVHERLLSLYTCAGCGLEAEHQLWEMKLLGREPDTQLYDVV 240
Query: 383 LAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGL 442
LAICASQ E +AV RLL+ +E ++ +KK+LSWLLRGY+KGG +A+ETL KMLD+GL
Sbjct: 241 LAICASQGEVAAVRRLLAGVESTSAGRRKKSLSWLLRGYVKGGFYLEASETLMKMLDMGL 300
Query: 443 YPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGPCLVYLYIKK 493
YPEY+DR AVL LR+ IQ+SG++E+Y+ LCKRLS+T LIGPC++YLY++K
Sbjct: 301 YPEYLDRAAVLTALRRNIQESGSLESYMKLCKRLSETDLIGPCVIYLYVRK 351
>gi|110738674|dbj|BAF01262.1| hypothetical protein [Arabidopsis thaliana]
Length = 260
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 168/260 (64%), Positives = 213/260 (81%), Gaps = 2/260 (0%)
Query: 245 MVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAE 304
MV+G Y A+ +V+ LR SGLKPE YSYLIA+TA+VKELN GK LR+LK + RAG +AE
Sbjct: 1 MVDGDYRKAVDMVMELRLSGLKPEAYSYLIAMTAIVKELNSLGKTLRELKRFARAGFVAE 60
Query: 305 LDGKNLGLIEKYQSDLLADGSRLSSWAIQEG--GSSLYGVVHERLLAMYICAGRGLEAER 362
+D + LIEKYQS+ L+ G +L++WA++EG S+ GVVHERLLAMYICAGRG EAE+
Sbjct: 61 IDDHDRVLIEKYQSETLSRGLQLATWAVEEGQENDSIIGVVHERLLAMYICAGRGPEAEK 120
Query: 363 QLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYI 422
QLW+MKL G+E + DL+DIV+AICASQ E +AVSRLL+R+E M S KKKTLSWLLRGY+
Sbjct: 121 QLWKMKLAGREPEADLHDIVMAICASQKEVNAVSRLLTRVEFMGSQRKKKTLSWLLRGYV 180
Query: 423 KGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLI 482
KGGH +AAETL M+D GL+PEY+DRVAV+QG+ ++IQ+ +VEAY++LCKRL D L+
Sbjct: 181 KGGHFEEAAETLVSMIDSGLHPEYIDRVAVMQGMTRKIQRPRDVEAYMSLCKRLFDAGLV 240
Query: 483 GPCLVYLYIKKYKLWIIKML 502
GPCLVY+YI KYKLWI+KM+
Sbjct: 241 GPCLVYMYIDKYKLWIVKMM 260
>gi|168029469|ref|XP_001767248.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681503|gb|EDQ67929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/396 (43%), Positives = 249/396 (62%), Gaps = 11/396 (2%)
Query: 107 MNDRLSARELQLVLVYFSQEGRDSWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYI 166
M +RLSA++L+LVL YF+Q+GRDSWCALEV+EW++KENRV +ET +LM++IM WV K +
Sbjct: 1 MQERLSAKDLELVLTYFAQDGRDSWCALEVYEWMQKENRVGDETQKLMMAIMYEWVMKLV 60
Query: 167 EEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAE 226
E E+ V +V LL DM CVGLKP F +I+ +IS YW+ +K++A+ FVK +L G+ E
Sbjct: 61 EGEQSVEEVKSLLQDMYCVGLKPEFHIIQTIISSYWDKGRKDKALCFVKQMLETGV---E 117
Query: 227 GDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEF 286
D E P +L KM+ G+ +AI+LV L GL+ + SY AL A VKE +F
Sbjct: 118 SDAED----PLAFLLIKMVKAGEQKEAIELVRTLHGCGLELRISSYSAALLAAVKEQEQF 173
Query: 287 GKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHER 346
K R+++ V+ G + EL+ Y+ L + WA + G V++ER
Sbjct: 174 TKVQREVRMLVQNGQLQELEKHEKEAFATYEYLLHLQAEEIVLWAEKIGTPDKLPVIYER 233
Query: 347 LLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMN 406
LLAMY AG GL AER LW+MK G+E ++Y+ V+ +C N A R+LSR+E +
Sbjct: 234 LLAMYCIAGNGLAAERALWQMKFSGREPPVEMYNTVVGVCGFGNHREAAFRVLSRMEALG 293
Query: 407 SLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNV 466
+ KKT + L+ G++KGG+ +A+E L ML GL P++ +AVL+ L Q++G V
Sbjct: 294 LMPVKKTYTVLIGGFLKGGNFQEASEALLLMLTKGLRPDFHVMLAVLRSL----QKAGRV 349
Query: 467 EAYLNLCKRLSDTSLIGPCLVYLYIKKYKLWIIKML 502
YL+LCK L+D +I PCLVY+YI + L II++L
Sbjct: 350 SQYLHLCKTLADVGIIEPCLVYVYIDTHNLCIIRVL 385
>gi|302809366|ref|XP_002986376.1| hypothetical protein SELMODRAFT_446579 [Selaginella moellendorffii]
gi|300145912|gb|EFJ12585.1| hypothetical protein SELMODRAFT_446579 [Selaginella moellendorffii]
Length = 473
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/416 (38%), Positives = 243/416 (58%), Gaps = 13/416 (3%)
Query: 88 EAIEELERMTREPSDILEEMNDRLSARELQLVLVYFSQEGRDSWCALEVFEWLKKENRVD 147
E I +LE + +EP ++L ++ +LSA++LQLVL YF++EGRDSW ALEVFEW++K NRV+
Sbjct: 70 ETIFQLEGLLKEPGEVLNDIGGQLSAKDLQLVLAYFAEEGRDSWFALEVFEWMQKTNRVE 129
Query: 148 NETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKK 207
N+T +LM+SIM +W K +E+E+ V V LL DM CVGL P ++ +++ YWE K
Sbjct: 130 NDTHQLMMSIMVNWAMKLVEQEKPVEQVKALLEDMYCVGLTPESRIMHSIVAAYWEKGKA 189
Query: 208 ERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKP 267
A+ FVK V+S D P YL KM+ + AI+LV +R GL
Sbjct: 190 SEALTFVKEVMSSKWYQDRAD------DPLQYLIVKMVSSKQSKQAIRLVTEIRNGGLPL 243
Query: 268 EVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRL 327
+ +Y A+ A V E + A+ +L+ Y + G I+ ++G + I Y++ L +
Sbjct: 244 KGTTYSAAMLAAVHEQEQLSFAVHQLRKYQKKGVIS-IEGSDKS-IRTYEASLHRQAEQF 301
Query: 328 SSWAIQ-EGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAIC 386
+ WA + E L ++ERLLAMY AG+GL+AER LW++KL G+ +++ +L IC
Sbjct: 302 TQWAAEDEQSQELMPTIYERLLAMYCLAGKGLDAERSLWKLKLAGRSPAPSMFNTILGIC 361
Query: 387 ASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEY 446
A N R+ ++E K T S L+ G+IKGG+ +AA ++KML+ GL PE
Sbjct: 362 AFNNRAEDAYRIFGKMEASGREATKLTFSVLIGGFIKGGNPAEAASAMSKMLERGLRPEV 421
Query: 447 MDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGPCLVYLYIKKYKLWIIKML 502
+ + VL+ LR + V Y+ L K LSD L+ P ++Y YI KL II++L
Sbjct: 422 PEMLVVLRSLRS----ADMVPLYMTLAKTLSDEGLMEPRIMYFYIDSIKLCIIRLL 473
>gi|302814017|ref|XP_002988693.1| hypothetical protein SELMODRAFT_427387 [Selaginella moellendorffii]
gi|300143514|gb|EFJ10204.1| hypothetical protein SELMODRAFT_427387 [Selaginella moellendorffii]
Length = 472
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 162/416 (38%), Positives = 244/416 (58%), Gaps = 13/416 (3%)
Query: 88 EAIEELERMTREPSDILEEMNDRLSARELQLVLVYFSQEGRDSWCALEVFEWLKKENRVD 147
E I +LE + +EP ++L ++ ++LSA++LQLVL YF++EGRDSW ALEVFEW++K NRV+
Sbjct: 69 ETIFQLEGLLKEPGEVLNDIGEQLSAKDLQLVLSYFAEEGRDSWFALEVFEWMQKTNRVE 128
Query: 148 NETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKK 207
N+T +LM+SIM +W K +E+E+ V V LL DM CVGL P ++ +++ YWE K
Sbjct: 129 NDTHQLMMSIMVNWAMKLVEQEKPVEQVKALLEDMYCVGLTPESRIMHSIVAAYWEKGKA 188
Query: 208 ERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKP 267
A+ FVK V+S D P YL KM+ + AI+LV +R GL
Sbjct: 189 SEALTFVKEVMSSKWYQDRAD------DPLQYLIVKMVSSKQSKQAIRLVTEVRNGGLLL 242
Query: 268 EVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRL 327
+ +Y A+ A V E + A+ +L+ Y + G I+ ++G + I Y++ L +
Sbjct: 243 KGTTYSAAMLAAVHEQEQLSFAVHQLRKYQKKGVIS-IEGSDKS-IRTYEASLHRQAEQF 300
Query: 328 SSWAIQ-EGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAIC 386
+ WA + E L ++ERLLAMY AG+GL+AER LW++KL G+ +++ +L IC
Sbjct: 301 TQWAAEDEQPQELMPTIYERLLAMYCLAGKGLDAERSLWKLKLAGRSPAPSMFNTILGIC 360
Query: 387 ASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEY 446
A N R+ ++E K T S L+ G+IKGG+ +AA ++KML+ GL PE
Sbjct: 361 AFNNRAEDAYRIFGKMEASGREATKLTFSVLIGGFIKGGNPAEAASAMSKMLERGLRPEV 420
Query: 447 MDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGPCLVYLYIKKYKLWIIKML 502
+ + VL+ LR + V Y+ L K LSD L+ P ++Y YI KL II++L
Sbjct: 421 PEMLVVLRSLRS----ADMVPLYMKLAKTLSDEGLMEPRIMYFYIDSIKLCIIRLL 472
>gi|383135060|gb|AFG48528.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
Length = 147
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 100/146 (68%)
Query: 326 RLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAI 385
++ WAI+E + GV+HE+L+AMY A RG EAE LW+MKL G+E + YD VL +
Sbjct: 2 QIVKWAIEENVTEFMGVIHEKLVAMYTVAVRGFEAEHHLWQMKLAGREPSIETYDRVLVV 61
Query: 386 CASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPE 445
CA + AV RL++ +E + +KT SWL+ GY+KGGH +AA+TL KMLD GLYPE
Sbjct: 62 CAVEKNLLAVGRLMAAMEAVGKPPSRKTFSWLVHGYVKGGHFEEAAKTLIKMLDKGLYPE 121
Query: 446 YMDRVAVLQGLRKRIQQSGNVEAYLN 471
M+ VL+GL+K +Q++G+ E YLN
Sbjct: 122 KMEITMVLKGLQKNLQKTGHPELYLN 147
>gi|383135066|gb|AFG48531.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
gi|383135072|gb|AFG48534.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
gi|383135074|gb|AFG48535.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
gi|383135076|gb|AFG48536.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
gi|383135086|gb|AFG48541.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
Length = 147
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 98/146 (67%)
Query: 326 RLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAI 385
++ WAI+E GV+HE+L+AMY A RG EAE W+MKL G+E + YD VL +
Sbjct: 2 QIVKWAIEENAPEFMGVIHEKLVAMYTVAVRGFEAEHHFWQMKLAGREPSIETYDRVLVV 61
Query: 386 CASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPE 445
CA + AV RL++ +E + +KT SWL+ GY+KGGH +AA+TL KMLD GLYPE
Sbjct: 62 CAVEKNLLAVGRLMAAMEAVGKPPSRKTFSWLVHGYVKGGHFEEAAKTLIKMLDKGLYPE 121
Query: 446 YMDRVAVLQGLRKRIQQSGNVEAYLN 471
M+ VL+GL+K +Q++G+ E YLN
Sbjct: 122 KMEITMVLKGLQKNLQKTGHPELYLN 147
>gi|361067473|gb|AEW08048.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
gi|383135056|gb|AFG48526.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
gi|383135062|gb|AFG48529.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
gi|383135064|gb|AFG48530.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
gi|383135068|gb|AFG48532.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
gi|383135078|gb|AFG48537.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
gi|383135080|gb|AFG48538.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
gi|383135082|gb|AFG48539.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
gi|383135088|gb|AFG48542.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
Length = 147
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 99/146 (67%)
Query: 326 RLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAI 385
++ WAI+E GV+HE+L+AMY A RG EAE LW+MKL G+E + YD VL +
Sbjct: 2 QIVKWAIEENVPEFMGVIHEKLVAMYTVAVRGFEAEHHLWQMKLAGREPSIETYDRVLVV 61
Query: 386 CASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPE 445
CA + AV RL++ +E + +KT SWL+ GY+KGGH +AA+TL KMLD GLYPE
Sbjct: 62 CAVEKNLLAVGRLMAAMEAVGKPPSRKTFSWLVHGYVKGGHFEEAAKTLIKMLDKGLYPE 121
Query: 446 YMDRVAVLQGLRKRIQQSGNVEAYLN 471
M+ VL+GL+K +Q++G+ E YLN
Sbjct: 122 KMEITMVLKGLQKNLQKTGHPELYLN 147
>gi|383135070|gb|AFG48533.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
gi|383135084|gb|AFG48540.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
Length = 147
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 98/146 (67%)
Query: 326 RLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAI 385
++ WAI+E GV+HE+L+AMY A RG EAE LW+MKL G+E YD VL +
Sbjct: 2 QIVKWAIEENVPEFMGVIHEKLVAMYTVAVRGFEAEHHLWQMKLAGREPSIQTYDRVLVV 61
Query: 386 CASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPE 445
CA + AV RL++ +E + +KT SWL+ GY+KGGH +AA+TL KMLD GLYPE
Sbjct: 62 CAVEKNLLAVGRLMAAMEAVGKPPSRKTFSWLVHGYVKGGHFEEAAKTLIKMLDKGLYPE 121
Query: 446 YMDRVAVLQGLRKRIQQSGNVEAYLN 471
M+ VL+GL+K +Q++G+ E YLN
Sbjct: 122 KMEITMVLKGLQKNLQKTGHPELYLN 147
>gi|383135058|gb|AFG48527.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
Length = 147
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 99/146 (67%)
Query: 326 RLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAI 385
++ WAI+E GV+HE+L+AMY A RG EAE LW+MKL G+E + YD VL +
Sbjct: 2 QIVKWAIEENVPEFMGVIHEKLVAMYTVAVRGFEAEYHLWQMKLAGREPSIETYDRVLVV 61
Query: 386 CASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPE 445
CA + AV RL++ +E + +KT SWL+ GY+KGGH +AA+TL KMLD GLYPE
Sbjct: 62 CAVEKNLLAVGRLMAAMEAVGKPPSRKTFSWLVHGYVKGGHFEEAAKTLIKMLDKGLYPE 121
Query: 446 YMDRVAVLQGLRKRIQQSGNVEAYLN 471
M+ VL+GL+K +Q++G+ E YLN
Sbjct: 122 KMEITMVLKGLQKNLQKTGHPELYLN 147
>gi|361067475|gb|AEW08049.1| Pinus taeda anonymous locus 0_17783_01 genomic sequence
Length = 147
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 96/146 (65%)
Query: 326 RLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAI 385
++ WAI+E G++HE+L+AMY A R EAE LW+MKL G+E + YD VL +
Sbjct: 2 QIVKWAIEENAPEFMGLIHEKLVAMYTVAVRAFEAEHHLWQMKLAGREPSIETYDRVLVV 61
Query: 386 CASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPE 445
CA + AV RL++ +E + +KT SWLL GY+KGGH +A + L KMLD GLYPE
Sbjct: 62 CAVEKNLLAVGRLMAAMEAVGKPPSRKTFSWLLHGYVKGGHFEEAGKALIKMLDKGLYPE 121
Query: 446 YMDRVAVLQGLRKRIQQSGNVEAYLN 471
M+ VL+GL+K +Q++G+ E YLN
Sbjct: 122 KMEITMVLKGLQKNLQKTGHPELYLN 147
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 10/217 (4%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
EG V A ++ L+ G P+VY+Y L A + + G A + V AG +
Sbjct: 245 EGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTG-AKEVFQAMVEAGVRPDQV 303
Query: 307 GKNLGLIEKY-QSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW 365
N+ LI+ + ++ L AD + +++E G H LL+ Y AG+ EAER +
Sbjct: 304 SYNI-LIDAFGRAGLTADAQAVYD-SMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVR 361
Query: 366 EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKK---KTLSWLLRGYI 422
E++ G + D +++ +L+ A N G + + S +E M S K TL+ L+ Y
Sbjct: 362 EIENSGVKPDTFMFNSLLS--AYGNSGR-IDEMESLLESMVSSVAKPDISTLNTLINAYA 418
Query: 423 KGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
+GG+I A E + GL P+ M +++ +R
Sbjct: 419 QGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQR 455
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 10/217 (4%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
EG V A ++ L+ G P++Y+Y L A + + G A + + AG A+
Sbjct: 254 EGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAG-AKEVFETMLEAGVKADHV 312
Query: 307 GKNLGLIEKY-QSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW 365
N+ LI+ + ++ L++D + ++++ G H LL+ ++ AGR +AE +
Sbjct: 313 SYNI-LIDAFGRAGLISDAQAIYD-SMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVR 370
Query: 366 EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMN-SLCKKK--TLSWLLRGYI 422
++ +G E D +++ +L A N G + ++ S E M S+CK TL+ L+ Y
Sbjct: 371 RLESMGVEPDTFMFNSLLG--AYGNSGR-MDKMESLYESMQGSVCKPDIITLNTLINVYA 427
Query: 423 KGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
+GG+I A E + G P+ M +++ KR
Sbjct: 428 QGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKR 464
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 137/334 (41%), Gaps = 66/334 (19%)
Query: 177 DLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERA---VLFVKAVLSRGIAYAEG---DGE 230
DL +M +G+KP +I Y++++ E+A ++ +K AY G +G
Sbjct: 393 DLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGL 452
Query: 231 GQQGGPTG-------YLAWKM--------------MVEGKYVDAIKLVIHLRESGLKPEV 269
G T ++W + + EG++ +AIK++ +++ GL P+V
Sbjct: 453 CHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDV 512
Query: 270 YSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSS 329
+ Y + G+ +AG + E GK+ Y +++A G + +
Sbjct: 513 FCYNTVII-----------------GFCKAGKMEE--GKS------YLVEMIAKGLKPNV 547
Query: 330 WAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVG-KEADGDLYDIVLAICAS 388
+ G+ ++G Y AG AER EM G D D++ C
Sbjct: 548 YTY---GAFIHG---------YCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKD 595
Query: 389 QNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMD 448
N A ++ ++ L +T S L+ G K G + +A +++LD GL P+
Sbjct: 596 GNTTKAFAKFRCMLD-QGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFT 654
Query: 449 RVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLI 482
+++ L K E + ++CK+ + +++
Sbjct: 655 YTSLISNLCKEGDLKAAFELHDDMCKKGINPNIV 688
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 136/346 (39%), Gaps = 47/346 (13%)
Query: 133 ALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFS 192
ALE F + K+ D T +V +C K +E +G +L +M G P
Sbjct: 111 ALEHFRAMAKDCAPDVMTYTALVHALCKAGK--FDEAQG------MLREMVAQGCAPDTV 162
Query: 193 MIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEG--------------------- 231
+I + +E+A ++ V+ RG+ ++ E
Sbjct: 163 TFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGV 222
Query: 232 --QQGGPTGYLAWKMMVEG----KYVD-AIKLVIHLRESGLKPEVYSYLIALTAVVKELN 284
+G L + +++ G K +D A KL+ + E G P V+++ I +T + K N
Sbjct: 223 VIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKA-N 281
Query: 285 EFGKALRKLKGYVRAG---SIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYG 341
G+A + L+ V G ++ GL ++ Q D D L + + E +
Sbjct: 282 RVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVD---DAYEL--FQLMERRNCPPN 336
Query: 342 VVHERLLAMYICAGRGLEAERQLWE-MKLVGKEADGDLYD-IVLAICASQNEGSAVSRLL 399
VV +L +C + +E RQL+ M+ G D Y+ ++ +C S A
Sbjct: 337 VVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQ 396
Query: 400 SRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPE 445
+ E S T S L GY G + DA + ++D G P+
Sbjct: 397 TIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPD 442
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 136/346 (39%), Gaps = 47/346 (13%)
Query: 133 ALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFS 192
ALE F + K+ D T +V +C K +E +G +L +M G P
Sbjct: 63 ALEHFRAMAKDCAPDVMTYTALVHALCKAGK--FDEAQG------MLREMIARGCAPDTV 114
Query: 193 MIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEG--------------------- 231
+I + +E+A ++ V+ RG+ ++ E
Sbjct: 115 TFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGV 174
Query: 232 --QQGGPTGYLAWKMMVEG----KYVD-AIKLVIHLRESGLKPEVYSYLIALTAVVKELN 284
+G L + +++ G K +D A KL+ + E G P V+++ I +T + K N
Sbjct: 175 VIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKA-N 233
Query: 285 EFGKALRKLKGYVRAG---SIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYG 341
G+A + L+ V G ++ GL ++ Q D D L + + E +
Sbjct: 234 RVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVD---DAYEL--FQLMERRNCPPN 288
Query: 342 VVHERLLAMYICAGRGLEAERQLWE-MKLVGKEADGDLYD-IVLAICASQNEGSAVSRLL 399
VV +L +C + +E RQL+ M+ G D Y+ ++ +C S A
Sbjct: 289 VVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQ 348
Query: 400 SRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPE 445
+ E S T S L GY G + DA + ++D G P+
Sbjct: 349 TIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPD 394
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 90/222 (40%), Gaps = 41/222 (18%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G +A KLVI + + GLKP+ ++Y + + KE + AL K V+ G ELD
Sbjct: 379 GDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKE-GDLESALEIRKEMVKEG--IELDN 435
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEM 367
V L++ + G+ +EAER L EM
Sbjct: 436 ----------------------------------VAFTALISGFCREGQVIEAERTLREM 461
Query: 368 KLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHI 427
G + D Y +V+ + + +LL ++ + T + LL G K G +
Sbjct: 462 LEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQM 521
Query: 428 NDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAY 469
+A L ML+LG+ P+ + +L+G K GN E +
Sbjct: 522 KNANMLLDAMLNLGVVPDDITYNILLEGHCKH----GNREDF 559
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 163/399 (40%), Gaps = 69/399 (17%)
Query: 103 ILEEMNDRL---SARELQLVLVYFSQEGRDSWCALEVFEWLK----KENRVDNETMELMV 155
+ +EM DR + +L++V + + GR S +V WLK + VDN T LM+
Sbjct: 215 VFDEMLDRAVVPDSTSYKLMVVGYCRMGRIS----DVDRWLKDMIERGYAVDNATCTLMI 270
Query: 156 SIMCS---------WVKKYIEE--ERGVGDVVDLLVDMDCVG-LKPGFSMIEKVISLYWE 203
S + KK+++ + + L+ + +G +K F M+E+++ W+
Sbjct: 271 STFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWK 330
Query: 204 ------------MEKK---ERAV-LFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVE 247
+ KK E+A LF+K V S P Y + M+
Sbjct: 331 PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYK------------PNVY-TYTCMIN 377
Query: 248 G-----KYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSI 302
G K A L+I ++E GL P +Y + K N FG+A + + G
Sbjct: 378 GYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGN-FGRAYELMDLMGKEGFT 436
Query: 303 AELDGKNL---GLIEKYQSDLLADGSRLSSWAIQEGGSSLYG--VVHERLLAMYICAGRG 357
+ N GL +K + + +L ++ G L+ V + L++ +
Sbjct: 437 PNIFTYNAIIDGLCKKGR---FPEAYKLLRRGLKSG---LHADKVTYTILISEFCRQTDN 490
Query: 358 LEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWL 417
+A M VG + D Y++++A Q + +L + L K+T + +
Sbjct: 491 KQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSM 550
Query: 418 LRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
+ GY + GHI+ A + KM D G P+ + A++ GL
Sbjct: 551 ICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGL 589
>gi|1931651|gb|AAB65486.1| membrane-associated salt-inducible protein isolog; 88078-84012
[Arabidopsis thaliana]
Length = 652
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 36/212 (16%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
GK IKL ++ GLKP+V +Y L +K N + KA+ EL
Sbjct: 179 NGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAI-------------ELI 225
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
G +L +G ++ S +YG V LA+ GR EAE + +
Sbjct: 226 G-----------ELPHNGIQMDSV--------MYGTV----LAICASNGRSEEAENFIQQ 262
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
MK+ G + Y +L + + + L++ ++ + + K ++ LL+ YIKGG
Sbjct: 263 MKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGL 322
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
+ + E L+++ G M ++ GL K
Sbjct: 323 FDRSRELLSELESAGYAENEMPYCMLMDGLSK 354
>gi|145335386|ref|NP_172560.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242678|sp|Q0WVV0.1|PPR31_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g10910, chloroplastic; Flags: Precursor
gi|110741600|dbj|BAE98748.1| membrane-associated salt-inducible protein isolog [Arabidopsis
thaliana]
gi|332190541|gb|AEE28662.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 664
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 36/212 (16%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
GK IKL ++ GLKP+V +Y L +K N + KA+ EL
Sbjct: 179 NGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAI-------------ELI 225
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
G +L +G ++ S +YG V LA+ GR EAE + +
Sbjct: 226 G-----------ELPHNGIQMDSV--------MYGTV----LAICASNGRSEEAENFIQQ 262
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
MK+ G + Y +L + + + L++ ++ + + K ++ LL+ YIKGG
Sbjct: 263 MKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGL 322
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
+ + E L+++ G M ++ GL K
Sbjct: 323 FDRSRELLSELESAGYAENEMPYCMLMDGLSK 354
>gi|293333246|ref|NP_001169278.1| uncharacterized protein LOC100383141 [Zea mays]
gi|224028343|gb|ACN33247.1| unknown [Zea mays]
Length = 901
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 19/290 (6%)
Query: 174 DVVDLLVDMDCVGLKPGFSMIEKVISLY-WEMEKKERAVLFVKAVLSRGIAYAEGDGEGQ 232
+ +D+ +DM G+ P +I+++ + + VLF V+ RG+ + D +
Sbjct: 282 NALDMFLDMPAHGVMPDTYTFNTLINIFGFSGNSAQAEVLFASMVI-RGV---KPDTKTY 337
Query: 233 QGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRK 292
T + + G +K +R +GL P+ +Y I L V+ E KA
Sbjct: 338 NVMMTVFASI-----GDLEGVLKYYCQIRNAGLHPDAVTYRI-LLQVLCERKMVHKAEDV 391
Query: 293 LKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLA-MY 351
++G ++AGS + ++L ++ K DL G + A E GV + A M
Sbjct: 392 IEGILKAGSF--VHEQSLPVVMKMYVDL---GLLDEAIAFFEKHCRGKGVSSKNFSAIMD 446
Query: 352 ICAGRGL--EAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLC 409
+ AGRGL EAE + G E D Y++++ + VS L +E
Sbjct: 447 VFAGRGLWEEAEHIFCSERGDGNEKDIVEYNVMIKAYGQAKQYDRVSSLFESMEESGVPS 506
Query: 410 KKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
+ T + L++ + GG + A + L KM D G P+ A+++ +
Sbjct: 507 DECTYNSLIQMFSFGGFPHRAKKLLGKMKDAGFEPKCETYSAIIRSYSRH 556
>gi|414886512|tpg|DAA62526.1| TPA: hypothetical protein ZEAMMB73_338715 [Zea mays]
Length = 901
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 19/290 (6%)
Query: 174 DVVDLLVDMDCVGLKPGFSMIEKVISLY-WEMEKKERAVLFVKAVLSRGIAYAEGDGEGQ 232
+ +D+ +DM G+ P +I+++ + + VLF V+ RG+ + D +
Sbjct: 282 NALDMFLDMPAHGVMPDTYTFNTLINIFGFSGNSAQAEVLFASMVI-RGV---KPDTKTY 337
Query: 233 QGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRK 292
T + + G +K +R +GL P+ +Y I L V+ E KA
Sbjct: 338 NVMMTVFASI-----GDLEGVLKYYCQIRNAGLHPDAVTYRI-LLQVLCERKMVHKAEDV 391
Query: 293 LKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLA-MY 351
++G ++AGS + ++L ++ K DL G + A E GV + A M
Sbjct: 392 IEGILKAGSF--VHEQSLPVVMKMYVDL---GLLDEAIAFFEKHCRGKGVSSKNFSAIMD 446
Query: 352 ICAGRGL--EAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLC 409
+ AGRGL EAE + G E D Y++++ + VS L +E
Sbjct: 447 VFAGRGLWEEAEHIFCSERGDGNEKDIVEYNVMIKAYGQAKQYDRVSSLFESMEESGVPS 506
Query: 410 KKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
+ T + L++ + GG + A + L KM D G P+ A+++ +
Sbjct: 507 DECTYNSLIQMFSFGGFPHRAKKLLGKMKDAGFEPKCETYSAIIRSYSRH 556
>gi|147771903|emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
Length = 1313
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 343 VHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRI 402
+ L+ +Y AGR +A EM +G D ++ ++ C S S LL+ +
Sbjct: 652 TYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAETLLTEM 711
Query: 403 EVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQ 462
E KT + L Y GG+I+ A + K+ ++GL+P+ + AVL L +R
Sbjct: 712 EERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCER-NM 770
Query: 463 SGNVEAYLNLCKR 475
G VE + KR
Sbjct: 771 VGEVETVIAEMKR 783
>gi|224124604|ref|XP_002319373.1| predicted protein [Populus trichocarpa]
gi|222857749|gb|EEE95296.1| predicted protein [Populus trichocarpa]
Length = 810
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 112/264 (42%), Gaps = 25/264 (9%)
Query: 251 VDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNL 310
V+A+ + H+R GL P+ + + + V+K++ EF KA R K + AG + ELDG L
Sbjct: 26 VEALLWIKHMRLRGLFPDEVT-MNTVVKVLKDVGEFDKAERFYKDWC-AGRV-ELDGLEL 82
Query: 311 GLIEKYQSDLLADGSRLSSWAIQE----------GGSS---------LYGVVHERLLAMY 351
+ ++ ++ + + E GGSS + L+ +Y
Sbjct: 83 DSMLDSENGSRSEPVSFKHFLLTELFKTGGRVKIGGSSDEETLVRKPCLTSTYNTLIDLY 142
Query: 352 ICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKK 411
AGR +A EM G D ++ ++ C S S LL ++E
Sbjct: 143 GKAGRLKDAAEVFSEMLKSGVAMDTITFNTMIFTCGSHGLLSEAESLLDKMEERRISPDT 202
Query: 412 KTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLN 471
+T + L Y G+IN A E K+ ++GL P+ + +L L R VEA +
Sbjct: 203 RTYNIFLSLYADAGNINAALECYWKIRNVGLVPDIVSHRTILHILCGR-NMVREVEAVIE 261
Query: 472 LCKRLSDTSLIG--PCLVYLYIKK 493
K+ S + P ++ +YI +
Sbjct: 262 EMKKSSQKIDVHSVPGIIKMYINE 285
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 144/370 (38%), Gaps = 35/370 (9%)
Query: 102 DILEEM------NDRLSARELQLVLVYFSQEGRDSWCALEVFEWLKKENRVDNETM-ELM 154
D+L+EM + L R VL S EGR ALE+F LK+E M +M
Sbjct: 170 DLLDEMLPLPPGSPGLDVRAYTTVLHALSHEGRYER-ALELFAELKREGVAPTHVMYNVM 228
Query: 155 VSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFV 214
+ + Y R +V +L +M G++P VI+ + AV F
Sbjct: 229 LDV-------YGRMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFF 281
Query: 215 KAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVE-----GKYVDAIKLVIHLRESGLKPEV 269
+ + SRG + + +++ G Y++A++++ + ESG KP+
Sbjct: 282 EDLKSRGHVPC-------------VVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDA 328
Query: 270 YSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSS 329
+Y L + +A + L V G + N + + + + L
Sbjct: 329 VTY-NELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFD 387
Query: 330 WAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQ 389
W +++ G Y + +L M R L EM G + ++ +LA+C +
Sbjct: 388 W-MKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKR 446
Query: 390 NEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDR 449
V+R+L R++ + T + L+ Y + G +A + +M G P
Sbjct: 447 GMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTY 506
Query: 450 VAVLQGLRKR 459
A+L L ++
Sbjct: 507 NALLSVLSRQ 516
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 145/368 (39%), Gaps = 44/368 (11%)
Query: 110 RLSARELQLVLVYFSQEGRDSWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEE 169
RLSA +LV +EGR E +++ V+ T +++++ +C V K+
Sbjct: 191 RLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCK-VGKF---- 245
Query: 170 RGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGI------- 222
+ GDVV+ DM G P +I Y + K +A +K ++++ I
Sbjct: 246 QKAGDVVE---DMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITF 302
Query: 223 ------------------AYAEGDGEGQQGGPTGY--LAWKMMVEGKYVDAIKLVIHLRE 262
+ E +G Q Y L + GK +A+ L +
Sbjct: 303 NILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSG 362
Query: 263 SGLKPEVYSYLIALTAVVKE--LNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDL 320
GLKP V +Y + K+ L E + L + A ++ + LI+ Y
Sbjct: 363 MGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT----LIDAYGKAG 418
Query: 321 LADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYD 380
D + L + + G + L+ + G EA + EM+ G +AD Y+
Sbjct: 419 RMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYN 478
Query: 381 IVLAICASQNEGSAVSRLLSRIEVMNSLCKKK---TLSWLLRGYIKGGHINDAAETLTKM 437
I++ + E RLL + +M ++ T + L++G+ G + +A L +M
Sbjct: 479 ILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEM 538
Query: 438 LDLGLYPE 445
L+ GL P
Sbjct: 539 LEKGLIPN 546
>gi|225447241|ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Vitis vinifera]
Length = 1008
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 342 VVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSR 401
+ L+ +Y AGR +A EM +G D ++ ++ C S S LL+
Sbjct: 346 ATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAETLLTE 405
Query: 402 IEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQ 461
+E KT + L Y GG+I+ A + K+ ++GL+P+ + AVL L +R
Sbjct: 406 MEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCER-N 464
Query: 462 QSGNVEAYLNLCKR 475
G VE + KR
Sbjct: 465 MVGEVETVIAEMKR 478
>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
Length = 626
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 247 EGKYVDAIKLVIHLRESG--LKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAE 304
EG + A+ LV+ L + G + P++Y YL+A ++ +E F A L+ + G I
Sbjct: 405 EGWLISALNLVVELEKFGVSISPDIYDYLVA--SLCEEDRPFA-AKTLLERMSQRGYIPH 461
Query: 305 LDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQL 364
++ N + + D +AD L + I G + + ++ L+ GR +EAE+ +
Sbjct: 462 VEIYNKLIESLCKGDCVADALSLKA-EIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLM 520
Query: 365 WEMKLVGKEADGDLY-DIVLAICASQNEGSAVSRLL---SRIEVMNSLCKKKTLSWLLRG 420
EM G + D ++ ++ C ++ G A S L+ ++ +S ++ S L+R
Sbjct: 521 EEMLHFGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDS----ESYSTLVRI 576
Query: 421 YIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRI 460
+ G + E +ML +G P + ++ GLRK +
Sbjct: 577 VCEDGDVAKFMELQERMLKVGFAPNSLTCKYMIDGLRKNV 616
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 159/390 (40%), Gaps = 51/390 (13%)
Query: 102 DILEEMNDRLSARELQLVLVYFSQEGRDSWCALEVFEWLKKENRV--DNETMELMVSIMC 159
++L +M R +A V+ F GR ALEV +++ + D T ++S
Sbjct: 137 ELLRQM-PRPNAVTYNTVIAGFCARGR-VQAALEVMREMRERGGIAPDKYTYATLIS--- 191
Query: 160 SWVKKYIEEERGVGDVVDLLVDMDCVG-LKPGFSMIEKVISLYWEMEKKERAVLFVKAVL 218
W K E D V + +M G + P M +I Y ++ K + A+ + + ++
Sbjct: 192 GWCKIGRME-----DAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMV 246
Query: 219 SRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTA 278
RGIA L + ++ + DA ++ ++++G P+V++Y I +
Sbjct: 247 QRGIAMTVAT--------YNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILING 298
Query: 279 VVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSS 338
KE NE KAL + + G A + + + + RL + A+++G
Sbjct: 299 YCKEGNE-KKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRP 357
Query: 339 LYGVVHERLLAMYICAGRGLE-AERQLWEMKLVGKEADGDLYDIVL-AICASQNEGSAVS 396
VV L C G +E A + EM+ D Y+ ++ C
Sbjct: 358 --DVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFC---------- 405
Query: 397 RLLSRIEVMNSLCKKKT----------LSWLLRGYIKGGHINDAAETLTKMLDLGLYPEY 446
LL R++ +L + T + L+ GY G I DA +M+D G P
Sbjct: 406 -LLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTL 464
Query: 447 MDRVAVLQGLRKRIQQSGNVEAYLNLCKRL 476
M A++QGL K I+Q + E NL K +
Sbjct: 465 MTYNALIQGLCK-IRQGDDAE---NLMKEM 490
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 98/251 (39%), Gaps = 47/251 (18%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G+Y +A+ + + E G KP + +Y + LN FGK +
Sbjct: 222 GRYREAVNVFKKMEEEGCKPTLITYNVI-------LNVFGK-------------MGTPWN 261
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRG---LEAERQL 364
K L+EK +SD +A + + I C RG EA +
Sbjct: 262 KITSLVEKMKSDGIAPDAYTYNTLI-------------------TCCKRGSLHQEAAQVF 302
Query: 365 WEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKG 424
EMK G D Y+ +L + + ++L+ +E+ T + L+ Y +
Sbjct: 303 EEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARD 362
Query: 425 GHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSL-IG 483
G +++A E +M + G P+ +L G +++G VE+ +N+ + + +
Sbjct: 363 GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF----ERAGKVESAMNIFEEMRNAGCKPN 418
Query: 484 PCLVYLYIKKY 494
C +IK Y
Sbjct: 419 ICTFNAFIKMY 429
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 97/470 (20%), Positives = 183/470 (38%), Gaps = 109/470 (23%)
Query: 78 DEDEMSEEFFEAIEE-----LERMTREPSDILEEMNDRLSARELQLVLVYFSQ-----EG 127
DED+ + F + + L + P L E+ND ++ + +L+ F +
Sbjct: 97 DEDQFDDAKFRFLSDKGKLLLNSVVGSP---LHELNDFFNSVKFELLEADFPSLLKALDL 153
Query: 128 RDSW-CALEVFEW------LKKENRVDNETMELMVSIMCS--------------WVKKYI 166
+W AL +FEW + R+DN+ +ELMV I+ V+KY
Sbjct: 154 SGNWERALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYS 213
Query: 167 EEERGVGDV-------------VDLLVDMDCVGLKPGFSMIEKVISLYWEMEKK-ERAVL 212
+ R + +DL M+ +GL P ++ +Y +M + R +
Sbjct: 214 LDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILE 273
Query: 213 FVKAVLSRGIAYAEGDG---------EGQ-------------QGGPTGYLAWKMMVE--- 247
+ + S+G+ + E EG G G + + M++
Sbjct: 274 LLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFG 333
Query: 248 --GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAE- 304
G Y +A+ ++ + ++ P+ +Y NE YVRAG + E
Sbjct: 334 KAGIYTEALSILKEMEDNNCPPDSITY-----------NELAAT------YVRAGFLDEG 376
Query: 305 ------LDGKNL--------GLIEKY-QSDLLADGSRLSSWAIQEGGSSLYGVVHERLLA 349
+ K + +I+ Y ++ D RL S +++ G + + +LA
Sbjct: 377 MAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFS-KMKDLGCAPNVYTYNSVLA 435
Query: 350 MYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLC 409
M R + + L EMKL G + ++ +LA+C+ + + + V+++L ++
Sbjct: 436 MLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEP 495
Query: 410 KKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
K T + L+ Y + G D+A+ +M+ G P A+L L R
Sbjct: 496 DKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHR 545
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 88/217 (40%), Gaps = 37/217 (17%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G +A KLVI + + GLKP+ ++Y + + KE + AL K V+ G ELD
Sbjct: 379 GDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKE-GDLESALEIRKEMVKEG--IELDN 435
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEM 367
V L++ + G+ +EAER L EM
Sbjct: 436 ----------------------------------VAFTALISGFCREGQVIEAERTLREM 461
Query: 368 KLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHI 427
G + D Y +V+ + + +LL ++ + T + LL G K G +
Sbjct: 462 LEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQM 521
Query: 428 NDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSG 464
+A L ML+LG+ P+ + +L+ + +Q G
Sbjct: 522 KNANMLLDAMLNLGVVPDDITYNILLERTLQAWKQGG 558
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 28/225 (12%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRK---LKGYVRAGSIA 303
+G +A +L+ + GLKP V++Y A++ L + GK LR L ++ G
Sbjct: 406 QGLLEEAFELMDSMSGKGLKPCVFTY----NAIINGLCKTGKYLRAKGVLDEMLKIGMSP 461
Query: 304 ELDGKNLGLIEKYQSDLLADGSRLSSWAIQEG-------GSSLYGVVHERLLAMYICAGR 356
+ N+ L+E ++D + D R+ +G S+L G LL+ C +
Sbjct: 462 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG-----LLSKNGCLDQ 516
Query: 357 GLEAERQLWEMKLVGKEADGDLYDIVLA-ICASQNEGSAVSRLLSRIEVMNSLCKKKTLS 415
L+ R +MK G D +Y I++ C + G L R E++ C ++
Sbjct: 517 ALKYFR---DMKNAGLAPDNVIYTILIGGFCRN---GVMSEALKVRDEMLEQGCXLDVVT 570
Query: 416 W--LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
+ +L G K +++A E T+M + G++P++ ++ G K
Sbjct: 571 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXK 615
>gi|297843920|ref|XP_002889841.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
gi|297335683|gb|EFH66100.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 36/212 (16%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
GK IKL ++ GLKP+V +Y L +K N + KA+ EL
Sbjct: 180 NGKLDSCIKLFDQMKRGGLKPDVITYNTLLAGCIKVKNGYPKAV-------------ELI 226
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
G +L +G ++ S +YG V LA+ GR EAE + +
Sbjct: 227 G-----------ELPHNGIQMDSV--------MYGTV----LAICASNGRCEEAENFIQQ 263
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
MK G + Y +L + + + L++ ++ + + K ++ LL+ YIKGG
Sbjct: 264 MKAEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGL 323
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
+ + E L+++ G M ++ GL K
Sbjct: 324 FDRSRELLSELESAGYAENEMPYCMLMDGLSK 355
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 12/216 (5%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
+GK + + L+ +++ GLKP+ Y Y + A+ KE A+ L + G + ++
Sbjct: 314 DGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKE-GRVDLAIEVLDVMISDGCVPDIV 372
Query: 307 GKNLGLI----EKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAER 362
N L +K + L+ +L SS + + + G + A
Sbjct: 373 NYNTILACLCKQKRADEALSIFEKLGEVGCSPNASS-----YNSMFSALWSTGHKVRALG 427
Query: 363 QLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLRG 420
+ EM G + DG Y+ +++ LL +E+ +S CK +S+ +L G
Sbjct: 428 MILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLG 487
Query: 421 YIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
K ++DA E L M+D G P +++G+
Sbjct: 488 LCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGI 523
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 20/230 (8%)
Query: 252 DAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAG---SIAELDGK 308
+A+ + +R+ GL P V +Y + A+ K L A K + G +I
Sbjct: 397 EAMDIFNKMRQQGLSPNVVNYATLIDALCK-LGRVDDAELKFNQMINEGVAPNIVVFTSL 455
Query: 309 NLGL--IEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICA-GRGLEAERQLW 365
GL I+K++ L + +G VV + +C GR ++A+R +
Sbjct: 456 VYGLCTIDKWEK-----AGELFFEMVNQGIHP--NVVFFNTIMCNLCTEGRVMKAQRLID 508
Query: 366 EMKLVGKEADGDLYDIVL---AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYI 422
M+ VG D Y+ ++ + +E S + ++ + + + C T + LL GY
Sbjct: 509 LMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNEC---TYNTLLHGYC 565
Query: 423 KGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNL 472
+ G I+DA +ML G+ P + +L GL K + S E YLN+
Sbjct: 566 RDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNM 615
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 28/225 (12%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRK---LKGYVRAGSIA 303
+G +A +L+ + GLKP V++Y A++ L + GK LR L ++ G
Sbjct: 302 QGLLEEAFELMDSMSGKGLKPCVFTY----NAIINGLCKTGKYLRAKGVLDEMLKIGMSP 357
Query: 304 ELDGKNLGLIEKYQSDLLADGSRLSSWAIQEG-------GSSLYGVVHERLLAMYICAGR 356
+ N+ L+E ++D + D R+ +G S+L G LL+ C +
Sbjct: 358 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG-----LLSKNGCLDQ 412
Query: 357 GLEAERQLWEMKLVGKEADGDLYDIVLA-ICASQNEGSAVSRLLSRIEVMNSLCKKKTLS 415
L+ R +MK G D +Y I++ C + G L R E++ C ++
Sbjct: 413 ALKYFR---DMKNAGLAPDNVIYTILIGGFCRN---GVMSEALKVRDEMLEQGCVLDVVT 466
Query: 416 W--LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
+ +L G K +++A E T+M + G++P++ ++ G K
Sbjct: 467 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSK 511
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 172/431 (39%), Gaps = 85/431 (19%)
Query: 104 LEEMNDRLSARELQLVLVYFSQ-----EGRDSW-CALEVFEW------LKKENRVDNETM 151
L E+ND ++ + +L+ F + +W AL +FEW + R+DN+ +
Sbjct: 124 LHELNDFFNSVKFELLEADFPSLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQVV 183
Query: 152 ELMVSIMCS--------------WVKKYIEEERGVGDV-------------VDLLVDMDC 184
ELMV I+ V+KY + R + +DL M
Sbjct: 184 ELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKE 243
Query: 185 VGLKPGFSMIEKVISLYWEMEKK-ERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWK 243
+GL P ++ +Y +M + +R + + + S+G+ E +
Sbjct: 244 IGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFT--------CSTVISA 295
Query: 244 MMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLK--------- 294
EG +A K + L+ +G KP +Y ++ V + + +AL LK
Sbjct: 296 CGREGMLDEARKFLAELKFNGYKPGTVTY-NSMLQVFGKAGIYTEALSILKEMEDNNCPP 354
Query: 295 ----------GYVRAGSIAE-------LDGKNL--------GLIEKY-QSDLLADGSRLS 328
YVRAG + E + K + +I+ Y ++ D RL
Sbjct: 355 DSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLF 414
Query: 329 SWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICAS 388
S +++ G + + +LAM R + + L EMKL G + ++ +LA+C+
Sbjct: 415 SL-MKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSE 473
Query: 389 QNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMD 448
+ + + V+++L ++ K T + L+ Y + G D+A+ +M+ G P
Sbjct: 474 EGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTT 533
Query: 449 RVAVLQGLRKR 459
A+L L +R
Sbjct: 534 YNALLNALARR 544
>gi|168005568|ref|XP_001755482.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693189|gb|EDQ79542.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 88/210 (41%), Gaps = 13/210 (6%)
Query: 244 MMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIA 303
M+ GK A +L L++ GL+P+ +Y + K + + KAL ++ ++A +
Sbjct: 268 MIYNGKIDKAFRLFEQLKKEGLQPDTVTYSTVIAGCAKTRDGYSKALALIED-IKASGLT 326
Query: 304 ELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQ 363
+ ++ S L ++ + + + G + + LL Y G+ +AER
Sbjct: 327 QDAVIYGAMMNVCASQGLDREAQATFQEMCDAGFTPNLFHYSSLLNAYASRGKYQQAERV 386
Query: 364 LWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEV------MNSLCKKKTLSWL 417
L ++ G + +Y+ ++ A+ S + RIE M S C +
Sbjct: 387 LEAIRAAGLTPNLVVYNSLMNAYANCQMPSKAREVFDRIEAEGLQRDMVSFCS------M 440
Query: 418 LRGYIKGGHINDAAETLTKMLDLGLYPEYM 447
+ Y K + +A ET M+ G+ P YM
Sbjct: 441 MDAYAKSDMLKEAQETFDSMIAQGMKPVYM 470
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 28/225 (12%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRK---LKGYVRAGSIA 303
+G +A +L+ + GLKP V++Y A++ L + GK LR L ++ G
Sbjct: 145 QGLLEEAFELMDSMSGKGLKPCVFTY----NAIINGLCKTGKYLRAKGVLDEMLKIGMSP 200
Query: 304 ELDGKNLGLIEKYQSDLLADGSRLSSWAIQEG-------GSSLYGVVHERLLAMYICAGR 356
+ N+ L+E ++D + D R+ +G S+L G LL+ C +
Sbjct: 201 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG-----LLSKNGCLDQ 255
Query: 357 GLEAERQLWEMKLVGKEADGDLYDIVLA-ICASQNEGSAVSRLLSRIEVMNSLCKKKTLS 415
L+ R +MK G D +Y I++ C + G L R E++ C ++
Sbjct: 256 ALKYFR---DMKNAGLAPDNVIYTILIGGFCRN---GVMSEALKVRDEMLEQGCVLDVVT 309
Query: 416 W--LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
+ +L G K +++A E T+M + G++P++ ++ G K
Sbjct: 310 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSK 354
>gi|449445824|ref|XP_004140672.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Cucumis sativus]
gi|449487417|ref|XP_004157616.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Cucumis sativus]
Length = 486
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 101/222 (45%), Gaps = 11/222 (4%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G++ A+ + +KP+VY++ I ++ + ++F +AL K G +
Sbjct: 198 GRFDKALGFYSRMLSDRVKPDVYTFNILISGYCRN-SQFVQALELFKEMREKGCSPNVIS 256
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEM 367
N + ++ DG L+ + + E G V E L+ G+ EA L +
Sbjct: 257 FNTLIKGFFRERKFEDGIALA-YEMIELGCKFSSVTCEILMDGLSREGKIFEACEILLDF 315
Query: 368 ---KLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKG 424
+++ K D D Y +V +C N G A+ ++ + + ++ T + L+ G K
Sbjct: 316 SRKQVLPK--DYDYYGVVEMLCGKGNAGKAM-EVVDELWMEGNVPSFITSTTLIDGLRKE 372
Query: 425 GHINDAAETLTKMLDLGLYPEYMDRVAVLQGL---RKRIQQS 463
G +NDA +ML++G+ P+ + ++LQ L RK ++ +
Sbjct: 373 GRVNDAMNVTERMLEVGMIPDSVTFNSLLQDLCNVRKTVEAN 414
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 18/237 (7%)
Query: 230 EGQQGG--PTGYLAWKMMVEGKY----VDAIKLVIH-LRESGLKPEVYSYLIALTAVVKE 282
E QQ G P G + + +++G+Y +D+ H + G+KP++ Y L + K
Sbjct: 318 EMQQRGLRPNG-ITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCK- 375
Query: 283 LNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEG----GSS 338
+ + KA RKL ++ + LI+ Y +G S+ I++G G
Sbjct: 376 VGDVNKA-RKLVDEMKMVGMKPDKITYTTLIDGY----CKEGDLESAMEIRKGMNEEGVV 430
Query: 339 LYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRL 398
L V L++ + GR +AER L EM G + D Y +V+ + +L
Sbjct: 431 LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKL 490
Query: 399 LSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQG 455
L +++ T + L+ G K G + +A L ML+LG+ P+ + +L+G
Sbjct: 491 LKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEG 547
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 134/346 (38%), Gaps = 55/346 (15%)
Query: 150 TMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKER 209
T +M++++C +E + + + M+ +G+KP +I + K +R
Sbjct: 218 TFNIMINVLC--------KEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQR 269
Query: 210 AVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEV 269
A + + + +G+ E D +G + EG+ +A L+ + E GL P
Sbjct: 270 ARVIFQTMKDKGL---EPDCYTYNSFISG-----LCKEGRLEEASGLICKMLEGGLVPNA 321
Query: 270 YSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSS 329
+Y + + + KA + G +A L NL + + + D +
Sbjct: 322 VTYNALIDGYCNK-GDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIK 380
Query: 330 WAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVG------------------ 371
++E G V H L+ Y G A L EM G
Sbjct: 381 -EMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKR 439
Query: 372 ---KEAD---------GDLYDIVL------AICASQNEGSAVSRLLSRIEVMNSLCKKKT 413
KEAD G L DI++ CA+ N A +LL ++ M L + T
Sbjct: 440 NRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAF-QLLKEMDNMKVLPDEIT 498
Query: 414 LSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
+ L++GY + G + +A + L +M G+ P+++ ++ G KR
Sbjct: 499 YNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKR 544
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 127/316 (40%), Gaps = 48/316 (15%)
Query: 168 EERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIA---- 223
+ R + + D LV+M GLKP +I Y + + + A + K +L GIA
Sbjct: 528 KSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDV 587
Query: 224 --YAEGDGEGQQGGPT---------------------GYLAWKMMVEGKYVDAIKLVIHL 260
A DG ++G T L ++ GK A++L+
Sbjct: 588 VCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF 647
Query: 261 RESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKN--------LGL 312
E GL P+V++Y ++ K+ GKA + + + G + N G
Sbjct: 648 LEKGLVPDVFTYNSIISGFCKQ-GGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGE 706
Query: 313 IEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGK 372
IE+ + L DG I G + V + ++ Y +G +A R EM L G
Sbjct: 707 IERARE--LFDG-------IPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGV 757
Query: 373 EADGDLYDIVLAICASQ-NEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAA 431
D +Y ++ C + N A+S L ++ +L+ L+ G+ K G + +A
Sbjct: 758 PPDSFVYSALIDGCRKEGNTEKALSLFLESVQ--KGFASTSSLNALMDGFCKSGKVIEAN 815
Query: 432 ETLTKMLDLGLYPEYM 447
+ L M+D + P+++
Sbjct: 816 QLLEDMVDKHVKPDHV 831
>gi|302820653|ref|XP_002991993.1| hypothetical protein SELMODRAFT_42424 [Selaginella moellendorffii]
gi|300140235|gb|EFJ06961.1| hypothetical protein SELMODRAFT_42424 [Selaginella moellendorffii]
Length = 331
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 108/272 (39%), Gaps = 21/272 (7%)
Query: 133 ALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFS 192
AL+ F ++K D E+ ++VS +C +E+ V VDLL M+ P
Sbjct: 74 ALDHFAKMEKNRDTDLESYSIVVSALC--------DEKRVDKAVDLLYSMNEESFLPDVG 125
Query: 193 MIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVD 252
+ ++I E++ +LF + + + G +L G +
Sbjct: 126 IYNRIIEAMSELQLHGAYLLFEQMIEA---------GVLPNSATFSFLVRGCFKRGFLDE 176
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGL 312
+L+ + ESG PE+ ++ + + K + A + G + L
Sbjct: 177 GSELLRQMVESGCVPELATFNAVIEGLCK-VRRVENARWVMNEMASQGCSPDAATHRFLL 235
Query: 313 IEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICA-GRGLEAERQLWEMKLVG 371
+ D L + R I G L V L +C GR +EA R EM +G
Sbjct: 236 EALCKMDKLDEAHRHVQRMIATG--CLPDTVTYSFLIKKLCKEGRPMEAHRIFKEMIGIG 293
Query: 372 KEADGDLYDIVLAICASQNEGSAVSRLLSRIE 403
+E D +Y+++LA + ++ +A L ++++
Sbjct: 294 REPDSSIYNLLLASHCAASKATACYELFTQMK 325
>gi|302816300|ref|XP_002989829.1| hypothetical protein SELMODRAFT_42426 [Selaginella moellendorffii]
gi|300142395|gb|EFJ09096.1| hypothetical protein SELMODRAFT_42426 [Selaginella moellendorffii]
Length = 331
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 108/272 (39%), Gaps = 21/272 (7%)
Query: 133 ALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFS 192
AL+ F ++K D E+ ++VS +C +E+ V VDLL M+ P
Sbjct: 74 ALDHFAKMEKNRDTDLESYSIVVSALC--------DEKRVDKAVDLLYSMNEESFLPDVG 125
Query: 193 MIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVD 252
+ ++I E++ +LF + + + G +L G +
Sbjct: 126 IYNRIIEAMSELQLHGAYLLFEQMIEA---------GVLPNSATFSFLVRGCFKRGFLDE 176
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGL 312
+L+ + ESG PE+ ++ + + K + A + G + L
Sbjct: 177 GSELLRQMVESGCVPELATFNAVIEGLCK-VRRVENARWVMNEMASQGCSPDAATHRFLL 235
Query: 313 IEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICA-GRGLEAERQLWEMKLVG 371
+ D L + R I G L V L +C GR +EA R EM +G
Sbjct: 236 EALCKMDKLDEAHRHVQRMIATG--CLPDTVTYSFLIKKLCKEGRPMEAHRFFKEMIGIG 293
Query: 372 KEADGDLYDIVLAICASQNEGSAVSRLLSRIE 403
+E D +Y+++LA + ++ +A L ++++
Sbjct: 294 REPDSSIYNLLLASHCAASKATACYELFTQMK 325
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 22/219 (10%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G+ DA+ L+ + +P V +Y + L AV K + FG+A++ L G +
Sbjct: 151 GRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKS-SGFGQAMKVLDEMRAKGCTPNIVT 209
Query: 308 KNLGLIEKYQSDLLADG----SRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQ 363
N+ + + D + D +RLSS+ Q S Y V + L A A R + E
Sbjct: 210 YNVIINGMCREDRVDDARQILNRLSSYGFQPDTVS-YTTVLKGLCA----AKRWEDVEVL 264
Query: 364 LWEM---KLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSL-CKKKT--LSWL 417
EM V E D+ +V C G V R + ++ M+ C T + +
Sbjct: 265 FCEMVENNCVPNEVTFDM--LVRFFC----RGGMVERAIEVLDRMSEHGCTANTTLCNIV 318
Query: 418 LRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
+ K G ++DA E L M G P+ + VL+GL
Sbjct: 319 INSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGL 357
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 18/237 (7%)
Query: 230 EGQQGG--PTGYLAWKMMVEG----KYVDAIKLVIH-LRESGLKPEVYSYLIALTAVVKE 282
E QQ G P G + + +++G + +D+ H + G+KP++ Y L + K
Sbjct: 318 EMQQRGLRPNG-ITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCK- 375
Query: 283 LNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEG----GSS 338
+ + KA RKL +R + LI+ Y +G S+ I++G G
Sbjct: 376 VGDVNKA-RKLVDEMRMVGMKPDKITYTTLIDGY----CKEGDLESAMEIRKGMNEEGVV 430
Query: 339 LYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRL 398
L V L++ + GR +AER L EM G + D Y +V+ + +L
Sbjct: 431 LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKL 490
Query: 399 LSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQG 455
L +++ T + L+ G K G + +A L ML+LG+ P+ + +L+G
Sbjct: 491 LKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEG 547
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKE--LNEFGKALRKLKGYVRAGSIAEL 305
GK +A+ L ++ G P+VY+Y ++ +VK +NE LRK++ G A++
Sbjct: 493 GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME---ENGCRADI 549
Query: 306 DGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW 365
+ N+ ++ + + + I+ G GV + LL + AG EA R +
Sbjct: 550 NSHNI-ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMR 608
Query: 366 EMKLVGKEADGDLYDIVL 383
EMK G E D Y +L
Sbjct: 609 EMKDKGFEYDAITYSSIL 626
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKE--LNEFGKALRKLKGYVRAGSIAEL 305
GK +A+ L ++ G P+VY+Y ++ +VK +NE LRK++ G A++
Sbjct: 493 GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME---ENGCRADI 549
Query: 306 DGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW 365
+ N+ ++ + + + I+ G GV + LL + AG EA R +
Sbjct: 550 NSHNI-ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMR 608
Query: 366 EMKLVGKEADGDLYDIVL 383
EMK G E D Y +L
Sbjct: 609 EMKDKGFEYDAITYSSIL 626
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 115/286 (40%), Gaps = 32/286 (11%)
Query: 187 LKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMV 246
+KP M +I Y + K + A+L+ ++ RG+A L + +
Sbjct: 582 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT--------YNLLVHALFM 633
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
+G+ +A +LV + GL P+V++Y I + KE N KAL + R G A +
Sbjct: 634 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN-VKKALEIFENMSRRGVRATVV 692
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
+ + + + +L A++ G V++ L+ + +G A + E
Sbjct: 693 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL-VLYNALINSHSTSGNIDRAFEIMGE 751
Query: 367 MKLVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNSLCKKKT----------LS 415
M+ D Y+ ++ +C LL R++ L + T +
Sbjct: 752 MEKKRIAPDDVTYNTLMRGLC-----------LLGRVDEARKLIDEMTERGIQPDLVTYN 800
Query: 416 WLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQ 461
L+ GY G + DA +M++ G P + A++QGL K Q
Sbjct: 801 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 846
>gi|290985263|ref|XP_002675345.1| predicted protein [Naegleria gruberi]
gi|284088941|gb|EFC42601.1| predicted protein [Naegleria gruberi]
Length = 1231
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 55/245 (22%)
Query: 239 YLAWKMMVEGKYVD------AIKLVIHLRESGLKPEVYSYLIALTAVV-KELNEFGKALR 291
Y W +++ Y+ AI+++ +++ G++P ++ I LTA +L E GKA+
Sbjct: 299 YYGWNCLIQA-YIQNKEVRQAIEIITEMQDYGVEPNSTTFNILLTACADSKLFEEGKAIH 357
Query: 292 KLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSS------WAIQE-----GGSSLY 340
KL G ++ Y S+LLA + AI+E +
Sbjct: 358 KLAT---------------GTLKDYSSELLASIVNFYTKCGHPETAIKECEQLKSKGLMN 402
Query: 341 GVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQN---EG----S 393
+V L+ YI +A + EM+ G E + ++I+L CA EG
Sbjct: 403 NIVWNCLIQAYIQNKEVRQAIEVITEMQDYGIEPNSTTFNILLKACADSKLFEEGKLLHQ 462
Query: 394 AVSRLLSR--IEVMNSLC---KKKT-------LSW--LLRGYIKGGHINDAAETLTKMLD 439
A ++L+ IE+ N++ K KT ++W L++ +++ + A E +T+M D
Sbjct: 463 ASGQVLNNPTIELNNTIDQFEKMKTKGFEANVITWTCLIQAHVQNKEVRQAIEVITEMQD 522
Query: 440 LGLYP 444
G+ P
Sbjct: 523 YGIEP 527
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 115/286 (40%), Gaps = 32/286 (11%)
Query: 187 LKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMV 246
+KP M +I Y + K + A+L+ ++ RG+A L + +
Sbjct: 587 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT--------YNLLVHALFM 638
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
+G+ +A +LV + GL P+V++Y I + KE N KAL + R G A +
Sbjct: 639 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN-VKKALEIFENMSRRGVRATVV 697
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
+ + + + +L A++ G V++ L+ + +G A + E
Sbjct: 698 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL-VLYNALINSHSTSGNIDRAFEIMGE 756
Query: 367 MKLVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNSLCKKKT----------LS 415
M+ D Y+ ++ +C LL R++ L + T +
Sbjct: 757 MEKKRIAPDDVTYNTLMRGLC-----------LLGRVDEARKLIDEMTERGIQPDLVTYN 805
Query: 416 WLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQ 461
L+ GY G + DA +M++ G P + A++QGL K Q
Sbjct: 806 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 851
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 138/346 (39%), Gaps = 59/346 (17%)
Query: 104 LEEMNDRLSARELQLVLVYFSQEGRDSWCALEVFEWLKKENRVDNETM-ELMVSIMCSWV 162
L++M+ ++S + L+L F+Q G + + +V+ +K + LM+ ++C +
Sbjct: 885 LQDMDLKISKSSILLMLEAFAQAG-NLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRF- 942
Query: 163 KKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGI 222
+ V DV +L +M G KP + V+ LY +E+ + + + + G+
Sbjct: 943 -------KRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGL 995
Query: 223 AYAEGDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKP--EVYSYLIALTAVV 280
A D E T Y EG + L+ ++ GL+P + Y +IA
Sbjct: 996 A---PDEETYNTLITMYCRDHRPEEG-----LSLMHKMKSLGLEPKRDTYRSMIA----- 1042
Query: 281 KELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLY 340
A K + Y +A + E +L ++G +L S Y
Sbjct: 1043 --------AFSKQQLYDQAEELFE--------------ELRSNGYKLD--------RSFY 1072
Query: 341 GVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLS 400
+ ++ MY +G +AE L MK G E + +++ + R+L
Sbjct: 1073 HL----MMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILK 1128
Query: 401 RIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEY 446
+ M ++ S ++ Y+K G E LT+M + + P++
Sbjct: 1129 NLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAAIEPDH 1174
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 32/230 (13%)
Query: 252 DAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLG 311
+A+ + +R+ GL P V +Y + A+ K L A+ K I E+ G L
Sbjct: 448 EAVCIFDKMRQQGLSPNVVNYGALIDALCK-LGRVDDAILKFNQM-----INEVYG--LC 499
Query: 312 LIEKYQS------DLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW 365
+EK++ ++L G RL VV L+ GR +EA+R +
Sbjct: 500 TVEKWEKAEELVFEMLDQGIRLDV------------VVFNTLMCDLCREGRVMEAQRLIE 547
Query: 366 EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKK---TLSWLLRGYI 422
M VG D Y+ ++ ++LL +VM S+ K T + LL GY
Sbjct: 548 LMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLL---DVMVSIGLKPNEFTYNTLLHGYC 604
Query: 423 KGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNL 472
K I+DA L +ML G P+ + +L GL + + S E YLN+
Sbjct: 605 KARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNM 654
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 317 QSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADG 376
Q+ L D ++S +++E G L + L+A + R EA L EMK VG D
Sbjct: 365 QAGRLEDACSMAS-SMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDV 423
Query: 377 DLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLRGYIKGGHINDAAETL 434
Y+ +L+ + +AV LL ++ ++ C+ +++ L+ GY K G I++A L
Sbjct: 424 CTYNTLLSGSCKAGDFAAVDELLGKM--IDDGCQPSVITFGTLVHGYCKVGKIDEALRIL 481
Query: 435 TKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSL 481
M + G++P + ++ L KR G+V+ + L + + S+
Sbjct: 482 RSMDESGIHPNNVIYNTLIDFLCKR----GDVDLAIELFDEMKEKSV 524
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 317 QSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADG 376
Q+ L D ++S +++E G L + L+A + R EA L EMK VG D
Sbjct: 365 QAGRLEDACSMAS-SMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDV 423
Query: 377 DLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLRGYIKGGHINDAAETL 434
Y+ +L+ + +AV LL ++ ++ C+ +++ L+ GY K G I++A L
Sbjct: 424 CTYNTLLSGSCKAGDFAAVDELLGKM--IDDGCQPSVITFGTLVHGYCKVGKIDEALRIL 481
Query: 435 TKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSL 481
M + G++P + ++ L KR G+V+ + L + + S+
Sbjct: 482 RSMDESGIHPNNVIYNTLIDFLCKR----GDVDLAIELFDEMKEKSV 524
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 38/200 (19%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
E + +L LRE G +VY+Y ++A+ + RK K
Sbjct: 95 ESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRN--------RKFK------------ 134
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
+ LG E+ ++E G V + ++ +Y GR E +L+E
Sbjct: 135 -EALGFFEQ----------------MKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFE 177
Query: 367 -MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGG 425
MK G + D Y+ + CAS + + L ++++ N + T + LL Y K G
Sbjct: 178 EMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAG 237
Query: 426 HINDAAETLTKMLDLGLYPE 445
N+AA L +M G P
Sbjct: 238 WYNEAANVLKEMESAGCLPN 257
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 137/344 (39%), Gaps = 53/344 (15%)
Query: 133 ALEVFEWLKKEN-RVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGF 191
A ++F+ +K +N + D T +S +C ++ IEE GV L + GL P
Sbjct: 271 ASKIFKTMKDKNLKPDCYTYNSFISRLCK--ERRIEEASGV------LCKLLESGLVPNA 322
Query: 192 SMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYV 251
+I ++A + +++RGI + L + +E +
Sbjct: 323 VTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFT--------YNLLIHALFLEKRIE 374
Query: 252 DAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGS-------IAE 304
+A ++ +RE G++P+V +Y I ++ GY R G+ E
Sbjct: 375 EAEDMIKEMREKGVEPDVVTYNI-----------------QINGYCRCGNAKKALSLFDE 417
Query: 305 LDGKNL-GLIEKYQS--DLLADGSRLSSW------AIQEGGSSLYGVVHERLLAMYICAG 355
+ KN+ +E Y S D+ +R+S +I+EG L ++ L C
Sbjct: 418 MVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEG--MLPDIIMFNALIDGHCVN 475
Query: 356 RGLEAERQLW-EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
++ QL EM D ++ ++ + + +LL ++ +
Sbjct: 476 GNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISY 535
Query: 415 SWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
+ L+ GY K G + DA E +ML LG P + A++QG K
Sbjct: 536 NTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSK 579
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 119/286 (41%), Gaps = 32/286 (11%)
Query: 187 LKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMV 246
+KP M +I Y + K + A+L+ ++ RG+A L + +
Sbjct: 140 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVA--------TYNLLVHALFM 191
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
+G+ +A +LV + GL P+V++Y I + KE N KAL + R G A +
Sbjct: 192 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN-VKKALEIFENMSRRGVRATVV 250
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
+ + + + +L A++ G V++ L+ + +G A + E
Sbjct: 251 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDL-VLYNALINSHSTSGNIDRAFEIMGE 309
Query: 367 MKLVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIE----VMNSLCKKK------TLS 415
M+ D Y+ ++ +C LL R++ +++ + K+ T +
Sbjct: 310 MEKKRIAPDDVTYNTLMRGLC-----------LLGRVDEARKLIDEMTKRGIQPDLVTYN 358
Query: 416 WLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQ 461
L+ GY G + DA +M++ G P + A++QGL K Q
Sbjct: 359 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 404
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 7/154 (4%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKE--LNEFGKALRKLKGYVRAGSIAEL 305
GK +A+ L ++ G P+VY+Y ++ +VK +NE LRK++ G A++
Sbjct: 493 GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKME---ENGCTADI 549
Query: 306 DGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW 365
+ N+ ++ + + + ++ G GV + LL + AG EA R +
Sbjct: 550 NSHNI-ILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMR 608
Query: 366 EMKLVGKEADGDLYDIVL-AICASQNEGSAVSRL 398
EMK G E D Y +L A+ +E VS L
Sbjct: 609 EMKDKGFEYDAITYSSILDAVGNMDHEKDDVSSL 642
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 76/196 (38%), Gaps = 2/196 (1%)
Query: 260 LRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSD 319
+ E G+ P++ +Y L +LN K LK G++ E+ N+ L+E Y
Sbjct: 275 MNEGGVVPDITTYTY-LVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNV-LLEAYARI 332
Query: 320 LLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLY 379
+ + +QE G + LL +Y GR E EMK+ E D Y
Sbjct: 333 GNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATY 392
Query: 380 DIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLD 439
+ ++ + V L + N +T L+ KGG +DA + L M +
Sbjct: 393 NTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSE 452
Query: 440 LGLYPEYMDRVAVLQG 455
G+ P V++
Sbjct: 453 KGMIPSSKAYTGVIEA 468
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 37/203 (18%)
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGL 312
A +V+ +R +GL+P+ +Y + KE ELD +
Sbjct: 275 ASGIVVEMRSAGLRPDTVTYTTLIDGYCKE--------------------EELD-----M 309
Query: 313 IEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGK 372
+ + +++A+G L V + L++ AGR +AER L EM G
Sbjct: 310 AMEIKQNMVAEGVGLDE------------VTYTALISGLSKAGRSADAERVLGEMMEAGL 357
Query: 373 EADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAE 432
E D Y +V+ + + RLL ++ T + ++ G+ K G + +A
Sbjct: 358 EPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADM 417
Query: 433 TLTKMLDLGLYPEYMDRVAVLQG 455
L M+++G+ P+ + +L G
Sbjct: 418 LLNAMINIGVSPDDITYNILLDG 440
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 317 QSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADG 376
Q+ L D ++S +++E G L + L+A + R EA L EMK VG D
Sbjct: 365 QAGRLEDACSMAS-SMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDV 423
Query: 377 DLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLRGYIKGGHINDAAETL 434
Y+ +L+ + +AV LL ++ ++ C+ +++ L+ GY K G I++A L
Sbjct: 424 CTYNTLLSGSCKAGDFAAVDELLGKM--IDDGCQPSVITFGTLVHGYCKVGKIDEALRIL 481
Query: 435 TKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSL 481
M + G++P + ++ L KR G+V+ + L + + S+
Sbjct: 482 RSMDESGIHPNNVIYNTLIDFLCKR----GDVDLAIELFDEMKEKSV 524
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 256 LVIHLRESGLKPE--VYSYLIALTAVVKELNEFGKALRKLK--GYVRAGSIAELDGKNLG 311
L+ + E+G+KP+ +++ +I + +++E K RK+K G S K G
Sbjct: 100 LLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFG 159
Query: 312 LIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVG 371
++ + + +L IQ+G + L+ + EA + +M G
Sbjct: 160 IVGRPH-----EAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSG 214
Query: 372 KEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCK--KKTLSWLLRGYIKGGHIND 429
+ D Y+ + A E RL+ +++ N+ K ++T ++RGY K G++ +
Sbjct: 215 MQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTE 274
Query: 430 AAETLTKMLDLGLYPEYMDRVAVLQG 455
A L KM +LG++P + ++++G
Sbjct: 275 ALRFLYKMKELGVHPNPVVFNSLIKG 300
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 144/372 (38%), Gaps = 56/372 (15%)
Query: 133 ALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFS 192
ALE+F+ +K++ V + S + +++ +R GD ++L MD G KP
Sbjct: 389 ALEMFDEMKQKGIVPEQYS------YNSLISGFLKADR-FGDALELFKHMDIHGPKPNGY 441
Query: 193 MIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVD 252
I+ Y + + +A+ + + S+GI G + + + G+
Sbjct: 442 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNA--------VLFGLAKSGRLGM 493
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGL 312
A ++ L+ G+ P+ +Y + + K ++F +A++ + +
Sbjct: 494 AKRVFHELKAMGVSPDTITYTMMIKCCSKA-SKFDEAVKIFYDMIENNCVP--------- 543
Query: 313 IEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGK 372
D+LA S + + LY AGRG EA R +++K +
Sbjct: 544 ------DVLAVNSLIDT---------LYK------------AGRGDEAWRIFYQLKEMNL 576
Query: 373 EADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAE 432
E Y+ +LA + + V LL + N T + +L K G +NDA +
Sbjct: 577 EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALD 636
Query: 433 TLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRL----SDTSLIGPCLVY 488
L M G P+ V+ GL K + + + + K L + I P V
Sbjct: 637 MLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVK 696
Query: 489 LYIKKYKLWIIK 500
+ + K L IIK
Sbjct: 697 IGLMKEALHIIK 708
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 141/350 (40%), Gaps = 39/350 (11%)
Query: 118 LVLVYFSQEGRD-SWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVV 176
L+ VY +Q RD + AL+VF L + ++T +I+ + + + E ++
Sbjct: 207 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTT---CNILLTSLVRANEFQKCCE--- 260
Query: 177 DLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGP 236
D+ C G+ P + I+ + + K E AV + G+A
Sbjct: 261 --AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVA------------- 305
Query: 237 TGYLAWKMMVE-----GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALR 291
+ + +++ G+Y +A + E G++P + +Y I + + + G A
Sbjct: 306 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRA-KRIGDAYF 364
Query: 292 KLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQE----GGSSLYGVVHERL 347
LK + G + N LI+ + + GS + I++ G SL + L
Sbjct: 365 VLKEMTKKGFPPNVIVYN-NLIDSF----IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 419
Query: 348 LAMYICAGRGLEAERQLWEMKLVGKEAD-GDLYDIVLAICASQNEGSAVSRLLSRIEVMN 406
+ Y G+ AER L EM +G + G ++ +C+ SA+ R + + + N
Sbjct: 420 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL-RFVGEMLLRN 478
Query: 407 SLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
L+ L+ G K G + A E + L+ G + A+L GL
Sbjct: 479 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 528
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 4/145 (2%)
Query: 332 IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNE 391
++E G + + + LL G+ EA + EM G + D D Y I + +N+
Sbjct: 246 MRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQEND 305
Query: 392 GSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVA 451
V R+L R + N L T + +++ K ++ +A + L +M++ G+ P+ A
Sbjct: 306 LHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNA 365
Query: 452 VLQGLRKRIQQSGNVEAYLNLCKRL 476
+ + V + LNL KR+
Sbjct: 366 I----QAYHCDHSEVNSALNLVKRM 386
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 24/250 (9%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G +A LV + GLKP +++Y + + KE + +A R L + G
Sbjct: 273 GLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKE-GSYERAKRVLDEMLGVGLCPNAAT 331
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEG-------GSSLYGVVHERLLAMYICAGRGLEA 360
N L+E + + + + R+ + +Q G SS+ GV G A
Sbjct: 332 FNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRN--------GELGRA 383
Query: 361 ERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LL 418
+MK VG D +Y I++ ++ S ++ R E++ C +++ LL
Sbjct: 384 LAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKM--RNEMVERGCVMDVVTYNTLL 441
Query: 419 RGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSD 478
G +G ++DA E +M++ G++P++ ++ G K GN+ L+L + ++
Sbjct: 442 NGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCK----DGNMTKALSLFETMTL 497
Query: 479 TSLIGPCLVY 488
SL + Y
Sbjct: 498 RSLKPDVVTY 507
>gi|449447783|ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Cucumis sativus]
Length = 1020
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 3/153 (1%)
Query: 343 VHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRI 402
+ L+ +Y AGR +A EM G D ++ ++ C S + LL ++
Sbjct: 323 TYNTLIDLYGKAGRLKDAANVFGEMLTTGISMDTITFNTMIYTCGSHGHLAEAETLLLKM 382
Query: 403 EVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR--I 460
E KT + L Y G+I+ A + ++ ++GL+P+ + A+L L +R +
Sbjct: 383 EERGLSPDTKTYNIFLSLYANNGNIDGALKCYRRIREVGLFPDVVTHRALLHVLSERNMV 442
Query: 461 QQSGNVEAYLNLCKRLSDTSLIGPCLVYLYIKK 493
+ NV A + L D + P ++ +YI +
Sbjct: 443 EDVENVIAEMEKSHILLDEHSL-PRVIKMYINE 474
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 4/145 (2%)
Query: 332 IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNE 391
++E G + + + LL G+ EA + EM G + D D Y I + +N+
Sbjct: 246 MRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQEND 305
Query: 392 GSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVA 451
V R+L R + N L T + +++ K ++ +A + L +M++ G+ P+ A
Sbjct: 306 LHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNA 365
Query: 452 VLQGLRKRIQQSGNVEAYLNLCKRL 476
+ + V + LNL KR+
Sbjct: 366 I----QAYHCDHSEVNSALNLVKRM 386
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 141/350 (40%), Gaps = 39/350 (11%)
Query: 118 LVLVYFSQEGRD-SWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVV 176
L+ VY +Q RD + AL+VF L + ++T +I+ + + + E ++
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTT---CNILLTSLVRANEFQKCCE--- 247
Query: 177 DLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGP 236
D+ C G+ P + I+ + + K E AV + G+A
Sbjct: 248 --AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVA------------- 292
Query: 237 TGYLAWKMMVE-----GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALR 291
+ + +++ G+Y +A + E G++P + +Y I + + + G A
Sbjct: 293 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRA-KRIGDAYF 351
Query: 292 KLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQE----GGSSLYGVVHERL 347
LK + G + N LI+ + + GS + I++ G SL + L
Sbjct: 352 VLKEMTKKGFPPNVIVYN-NLIDSF----IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 406
Query: 348 LAMYICAGRGLEAERQLWEMKLVGKEAD-GDLYDIVLAICASQNEGSAVSRLLSRIEVMN 406
+ Y G+ AER L EM +G + G ++ +C+ SA+ R + + + N
Sbjct: 407 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL-RFVGEMLLRN 465
Query: 407 SLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
L+ L+ G K G + A E + L+ G + A+L GL
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 85/211 (40%), Gaps = 41/211 (19%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G V+A KL + GL+P++ ++ EL + GY +AG I
Sbjct: 823 GDMVEAGKLFHEMLCRGLEPDIITF--------TEL---------MNGYCKAGHIK---- 861
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQL-WE 366
D R+ + IQ G S VV L +C L++ +L E
Sbjct: 862 ---------------DAFRVHNHMIQAGCSP--NVVTYTTLIDGLCKEGDLDSANELLHE 904
Query: 367 MKLVGKEADGDLYD-IVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGG 425
M +G + + Y+ IV +C S N AV +L+ E T + L+ Y K G
Sbjct: 905 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAV-KLVGEFEAAGLNADTVTYTTLMDAYCKSG 963
Query: 426 HINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
++ A E LT+ML GL P + ++ G
Sbjct: 964 EMDKAQEILTEMLGKGLQPTIVTFNVLMNGF 994
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 144/372 (38%), Gaps = 56/372 (15%)
Query: 133 ALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFS 192
ALE+F+ +K++ V + S + +++ +R GD ++L MD G KP
Sbjct: 354 ALEMFDEMKQKGIVPEQYS------YNSLISGFLKADR-FGDALELFKHMDIHGPKPNGY 406
Query: 193 MIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVD 252
I+ Y + + +A+ + + S+GI G + + + G+
Sbjct: 407 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNA--------VLFGLAKSGRLGM 458
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGL 312
A ++ L+ G+ P+ +Y + + K ++F +A++ + +
Sbjct: 459 AKRVFHELKAMGVSPDTITYTMMIKCCSKA-SKFDEAVKIFYDMIENNCVP--------- 508
Query: 313 IEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGK 372
D+LA S + + LY AGRG EA R +++K +
Sbjct: 509 ------DVLAVNSLIDT---------LYK------------AGRGDEAWRIFYQLKEMNL 541
Query: 373 EADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAE 432
E Y+ +LA + + V LL + N T + +L K G +NDA +
Sbjct: 542 EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALD 601
Query: 433 TLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRL----SDTSLIGPCLVY 488
L M G P+ V+ GL K + + + + K L + I P V
Sbjct: 602 MLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVK 661
Query: 489 LYIKKYKLWIIK 500
+ + K L IIK
Sbjct: 662 IGLMKEALHIIK 673
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 141/350 (40%), Gaps = 39/350 (11%)
Query: 118 LVLVYFSQEGRD-SWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVV 176
L+ VY +Q RD + AL+VF L + ++T +I+ + + + E ++
Sbjct: 183 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTT---CNILLTSLVRANEFQKCCE--- 236
Query: 177 DLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGP 236
D+ C G+ P + I+ + + K E AV + G+A
Sbjct: 237 --AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVA------------- 281
Query: 237 TGYLAWKMMVE-----GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALR 291
+ + +++ G+Y +A + E G++P + +Y I + + + G A
Sbjct: 282 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRA-KRIGDAYF 340
Query: 292 KLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQE----GGSSLYGVVHERL 347
LK + G + N LI+ + + GS + I++ G SL + L
Sbjct: 341 VLKEMTKKGFPPNVIVYN-NLIDSF----IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 395
Query: 348 LAMYICAGRGLEAERQLWEMKLVGKEAD-GDLYDIVLAICASQNEGSAVSRLLSRIEVMN 406
+ Y G+ AER L EM +G + G ++ +C+ SA+ R + + + N
Sbjct: 396 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL-RFVGEMLLRN 454
Query: 407 SLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
L+ L+ G K G + A E + L+ G + A+L GL
Sbjct: 455 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 504
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
Query: 250 YVDAIKLVIHLRESGLKP--EVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
Y +A ++ESG KP E Y+ LI A E G A + + G A++
Sbjct: 406 YSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTM---IDEGISADVST 462
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEM 367
N LIE + L D + S ++E S +E L+ +Y AG EA+ Q ++
Sbjct: 463 YN-SLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEAKAQFLDL 521
Query: 368 KLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGG 425
++ G+ D Y ++L++CA +N S++L + N + +L+G + G
Sbjct: 522 QVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEMLEPNMPSIYGVVGGILKGEMDDG 579
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 37/203 (18%)
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGL 312
A +V+ +R +GL+P+ +Y + KE ELD +
Sbjct: 399 ASGIVVEMRSAGLRPDTVTYTTLIDGYCKE--------------------EELD-----M 433
Query: 313 IEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGK 372
+ + +++A+G L V + L++ AGR +AER L EM G
Sbjct: 434 AMEIKQNMVAEGVGLDE------------VTYTALISGLSKAGRSADAERVLGEMMEAGL 481
Query: 373 EADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAE 432
E D Y +V+ + + RLL ++ T + ++ G+ K G + +A
Sbjct: 482 EPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADM 541
Query: 433 TLTKMLDLGLYPEYMDRVAVLQG 455
L M+++G+ P+ + +L G
Sbjct: 542 LLNAMINIGVSPDDITYNILLDG 564
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 109/272 (40%), Gaps = 51/272 (18%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
GK +A + + G P+V +Y L A+ KE + +A++ K + G + +
Sbjct: 198 GKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKE-GKTDEAMKLFKDVIAKGYMPDTVT 256
Query: 308 KN---LGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQL 364
N LGL K D + + + G + G + +L+ + A + +A + L
Sbjct: 257 YNSILLGLARKSNMDEAEEMFK----KMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVL 312
Query: 365 WEMKLVGKEADGDLYDIVL-AIC------------ASQNEGSAVSRLLSRIEVMNSLCKK 411
EM +G D Y+I+L +C ++ + ++S V+N LCK
Sbjct: 313 EEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKT 372
Query: 412 K----------------------TLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDR 449
T + L+ G K G +++A + L +M G P+Y+
Sbjct: 373 NKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAY 432
Query: 450 VAVLQGLRK--------RIQQSGNVEAYLNLC 473
++ GLRK R+ Q+ + +L+ C
Sbjct: 433 NTLMNGLRKQGRHIQADRLTQAMKEKGFLSDC 464
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 99/252 (39%), Gaps = 49/252 (19%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G+Y +A+ + + E G KP + +Y + LN FGK +
Sbjct: 222 GRYREAVNVFKKMEEDGCKPTLITYNVI-------LNVFGK-------------MGTPWN 261
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRG---LEAERQL 364
K L+EK +SD +A + + I C RG EA +
Sbjct: 262 KITSLVEKMKSDGIAPDAYTYNTLI-------------------TCCKRGSLHQEAAQVF 302
Query: 365 WEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKK-KTLSWLLRGYIK 423
EMK G D Y+ +L + + ++L+ + V+N T + L+ Y +
Sbjct: 303 EEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM-VLNGFSPSIVTYNSLISAYAR 361
Query: 424 GGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSL-I 482
G +++A E +M + G P+ +L G +++G VE+ +++ + + +
Sbjct: 362 DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF----ERAGKVESAMSIFEEMRNAGCKP 417
Query: 483 GPCLVYLYIKKY 494
C +IK Y
Sbjct: 418 NICTFNAFIKMY 429
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 124/318 (38%), Gaps = 41/318 (12%)
Query: 174 DVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQ 233
+V L +M VG P +I+ Y + EK RA + ++E G +
Sbjct: 342 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEY----------FSEMKNNGLK 391
Query: 234 GGPTGY--LAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALR 291
Y L EG AIKL + +R +GL P ++Y + A K N +A +
Sbjct: 392 PNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGN-LTEAWK 450
Query: 292 KLKGYVRAGS-------IAELDG--KNLGLIEKYQ--SDLLADGSRLSSWAIQEGGSSLY 340
L ++AG A LDG K +IE + +L DG I
Sbjct: 451 LLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG-------ISPNQQVYT 503
Query: 341 GVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLS 400
+VH YI A R +A + L +M + D LY ++ SQ + +L
Sbjct: 504 ALVHG-----YIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILE 558
Query: 401 RIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRI 460
++ + ++ Y K G +DA +M D+G+ + ++ GL K
Sbjct: 559 EMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCK-- 616
Query: 461 QQSGNVEAYLN-LCKRLS 477
+G VE ++ C+ LS
Sbjct: 617 --AGIVELAVDYFCRMLS 632
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 131/317 (41%), Gaps = 28/317 (8%)
Query: 162 VKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAV------LFVK 215
V+K + E RG G D++ V F +E+ S + EM+++ FV
Sbjct: 248 VEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVD 307
Query: 216 AVLSRGIA------YAEGDGEGQQGGPTGY--LAWKMMVEGKYVDAIKLVIHLRESGLKP 267
A G+ +A+ +G + Y L G+ DA+ L + + G+
Sbjct: 308 AFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPL 367
Query: 268 EVYSYLIALTAVVKE--LNEFGKALRKL-KGYVRAGSIAELDGKNLGLIEKYQSDLLADG 324
V +Y + + + KE + E R + + +RA + + + K L+
Sbjct: 368 NVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLL 427
Query: 325 SRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGL-EAERQLWEMKLVGKEADGDLYDIVL 383
S + + E SLYG L +C + L EA+ L +M G + + +Y ++
Sbjct: 428 SEMKDKGM-ELDVSLYGA-----LIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIM 481
Query: 384 AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLRGYIKGGHINDAAETLTKMLDLG 441
C + S LL ++ M+S + +++ L+ G K G I++A KM+DLG
Sbjct: 482 DACFKARKESEAIALLQKM--MDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLG 539
Query: 442 LYPEYMDRVAVLQGLRK 458
L P A++ GL K
Sbjct: 540 LEPNVQAYTALVDGLCK 556
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 12/217 (5%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
EG+ DA +L+ ++E+G P+ +Y + L+ + K +A + + G L
Sbjct: 262 EGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKA-GRVDEAFHRFELLQDGGFTLGLI 320
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGS-----SLYGVVHERLLAMYICAGRGLEAE 361
G + + +Q+ +G LS + G S +LY ++ R AGR +A
Sbjct: 321 GYSCLIDGLFQAGRFDEG--LSYYTEMLGKSISPDITLYTILIRRFAE----AGRTKDAF 374
Query: 362 RQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGY 421
L EMK G D Y+ +L L+S + N + T + ++ G
Sbjct: 375 LLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGL 434
Query: 422 IKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
K G I+ A + +M + G +P M A++ GL +
Sbjct: 435 CKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYR 471
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 100/252 (39%), Gaps = 64/252 (25%)
Query: 240 LAWKMMVEGKYVD-----AIKLVIHLRESGLKPEVYSYLIALTAVVKE--LNEFGKALRK 292
+ + +++E D A+KL+ +R+ G KP+V +Y + + + KE L+E K L
Sbjct: 244 ITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNN 303
Query: 293 LKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYI 352
+ Y G + H +L
Sbjct: 304 MPSY---------------------------------------GCKPNVITHNIILRSMC 324
Query: 353 CAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSR-IEVMNSL--- 408
GR ++AER L +M G ++I++ + RLL R I+V+ +
Sbjct: 325 STGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRK-------RLLGRAIDVLEKMPKH 377
Query: 409 -CKKKTLSW--LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGN 465
C +LS+ LL G+ + ++ A E L M+ G YP+ + +L L K G
Sbjct: 378 GCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCK----DGK 433
Query: 466 VEAYLNLCKRLS 477
V+A + + +LS
Sbjct: 434 VDAAVEILNQLS 445
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 134/337 (39%), Gaps = 46/337 (13%)
Query: 133 ALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFS 192
A +VF+ +++ + T ++S MC R + V L +M VG+KP
Sbjct: 205 ARKVFDEMRRSVQPTVVTFNTLISGMC--------RARDLDAVDGLYKEMSDVGVKPDVY 256
Query: 193 MIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMM----VEG 248
+I + + E AV + G+ P + ++ EG
Sbjct: 257 TYGALIKGFCRTGRMENAVKMFNEMRDTGV------------NPNAVVFTTLIDAHCKEG 304
Query: 249 KYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGK 308
+ L +R G+ P+ L+A A+V N +A R LK A SI E + K
Sbjct: 305 NVNAGMDLYQDMRVRGVMPD----LVAYNALV---NGLCRA-RNLKA---AESIVE-EMK 352
Query: 309 NLGL-IEKYQSDLLADG----SRLS-----SWAIQEGGSSLYGVVHERLLAMYICAGRGL 358
N GL +K L DG +L + E SL V + L++ AGR +
Sbjct: 353 NAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPV 412
Query: 359 EAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLL 418
+AER L EM E D Y +V+ + + +LL ++ T + ++
Sbjct: 413 DAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIM 472
Query: 419 RGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQG 455
G K G + +A L ML++G+ P+ + +L G
Sbjct: 473 NGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDG 509
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 18/229 (7%)
Query: 250 YVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKN 309
Y A+KL+ +R+ G P++ +Y + + + +E A+ LK G N
Sbjct: 203 YKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQE-GRVDDAMEFLKSLPSYGCEPNTVSYN 261
Query: 310 LGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGL--EAERQLWEM 367
+ L ++ D +L + ++G VV +L ++C RGL A L ++
Sbjct: 262 IVLKGLCTAERWEDAEKLMAEMSRKGRPP--NVVTFNMLISFLCR-RGLVEPAMEILDQI 318
Query: 368 KLVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVM-NSLCKKKTLSW--LLRGYIK 423
G + Y+ +L A C + + R ++ +E+M +S C +S+ LL +
Sbjct: 319 PKYGCTPNSLSYNPILHAFCKQKK----MDRAMAFVELMVSSGCYPDIVSYNTLLTALCR 374
Query: 424 GGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNL 472
GG ++ A E L ++ D G P + V+ GL K +G E L L
Sbjct: 375 GGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTK----AGKTEEALEL 419
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 99/237 (41%), Gaps = 16/237 (6%)
Query: 241 AWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAG 300
A K M+E +A+ + +R+ GL P+V S+ + A+ K L A+ + + G
Sbjct: 347 AKKAMIE----EAMHIFNKMRQQGLSPDVVSFGALIDALCK-LGRVDDAVLQFNQMINEG 401
Query: 301 SIAELDGKNLGLIEKYQSDLLADGSRLSS----WAIQEGGSSLYGVVHERLLAMYICAGR 356
N+ + L G + + + + G + V L+ GR
Sbjct: 402 VT-----PNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGR 456
Query: 357 GLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKK-TLS 415
+EA+R + M VG + Y+ ++A ++LL + V N L + T +
Sbjct: 457 VMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLD-VMVSNGLKPNEFTYT 515
Query: 416 WLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNL 472
LLRGY K ++DA +ML G+ P +L GL + + S E YLN+
Sbjct: 516 ILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNM 572
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G+ DA+ L+ + + G +P V +Y + L AV K + FG+A+ L G +
Sbjct: 155 GRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKS-SGFGEAMNVLDEMRAKGCTPNIVT 213
Query: 308 KNLGLIEKYQSDLLADG----SRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQ 363
N+ + + + D +RLSS+ Q S V+ +CA R + +
Sbjct: 214 YNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKG------LCAARRWDDVKV 267
Query: 364 LW----EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSL-CKKKT--LSW 416
L+ + K V E D+ +V C G V R + ++ M+ C T +
Sbjct: 268 LFAEMVDKKCVPNEVTFDM--LVRFFC----RGGMVERAIQVLQQMSQHGCTPNTTLCNI 321
Query: 417 LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
++ K G ++DA + L M G P+ + VL+GL
Sbjct: 322 VINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGL 361
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 144/372 (38%), Gaps = 56/372 (15%)
Query: 133 ALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFS 192
ALE+F+ +K++ V + S + +++ +R GD ++L MD G KP
Sbjct: 479 ALEMFDEMKQKGIVPEQYS------YNSLISGFLKADR-FGDALELFKHMDIHGPKPNGY 531
Query: 193 MIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVD 252
I+ Y + + +A+ + + S+GI G + + + G+
Sbjct: 532 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNA--------VLFGLAKSGRLGM 583
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGL 312
A ++ L+ G+ P+ +Y + + K ++F +A++ + +
Sbjct: 584 AKRVFHELKAMGVSPDTITYTMMIKCCSKA-SKFDEAVKIFYDMIENNCV---------- 632
Query: 313 IEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGK 372
D+LA S + + LY AGRG EA R +++K +
Sbjct: 633 -----PDVLAVNSLIDT---------LYK------------AGRGDEAWRIFYQLKEMNL 666
Query: 373 EADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAE 432
E Y+ +LA + + V LL + N T + +L K G +NDA +
Sbjct: 667 EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALD 726
Query: 433 TLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRL----SDTSLIGPCLVY 488
L M G P+ V+ GL K + + + + K L + I P V
Sbjct: 727 MLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVK 786
Query: 489 LYIKKYKLWIIK 500
+ + K L IIK
Sbjct: 787 IGLMKEALHIIK 798
>gi|449525162|ref|XP_004169587.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73710-like [Cucumis sativus]
Length = 1026
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 3/153 (1%)
Query: 343 VHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRI 402
+ L+ +Y AGR +A EM G D ++ ++ C S + LL ++
Sbjct: 323 TYNTLIDLYGKAGRLKDAANVFGEMLTTGISMDTITFNTMIYTCGSHGHLAEAETLLLKM 382
Query: 403 EVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR--I 460
E KT + L Y G+I+ A + ++ ++GL+P+ + A+L L +R +
Sbjct: 383 EERGLSPDTKTYNIFLSLYANDGNIDGALKCYRRIREVGLFPDVVTHRALLHVLSERNMV 442
Query: 461 QQSGNVEAYLNLCKRLSDTSLIGPCLVYLYIKK 493
+ NV A + L D + P ++ +YI +
Sbjct: 443 EDVENVIAEMEKSHILLDEHSL-PRVIKMYINE 474
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 150/373 (40%), Gaps = 37/373 (9%)
Query: 102 DILEEMNDRLSARELQLVLVYFSQEGRDSWCALEVFEWLKKENRV--DNETMELMVSIMC 159
++L +M R +A V+ F GR ALEV +++ + D T ++S
Sbjct: 137 ELLRQM-PRPNAVTYNTVIAGFCARGR-VQAALEVMREMRERGGIAPDKYTYATLIS--- 191
Query: 160 SWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLS 219
W K I V D ++ V P M +I Y + K + A+ + + ++
Sbjct: 192 GWCK--IGRMEDAAKVFDEMLTQGEVA--PSAVMYNALIGGYCDRGKLDVALQYREDMVQ 247
Query: 220 RGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAV 279
RG+A L + ++G+ DA ++ ++ +GL P+V++Y I +
Sbjct: 248 RGVAMTVAT--------YNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGY 299
Query: 280 VKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSL 339
KE NE KAL + R G A + + + + RL A+++G
Sbjct: 300 CKEGNE-KKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRP- 357
Query: 340 YGVVHERLLAMYICAGRGLE-AERQLWEMKLVGKEADGDLYDIVL-AICASQNEGSAVSR 397
VV L CAG +E A + EM+ D Y+ ++ C
Sbjct: 358 -DVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFC----------- 405
Query: 398 LLSRIEVMNSLCKKKTLSWLLR--GYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQG 455
LL R++ L + T + G K G +DA + +M+ G+ P+ +++++G
Sbjct: 406 LLGRLDEARGLIDEMTKRGIQPDLGLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEG 465
Query: 456 LRKRIQQSGNVEA 468
L +Q +A
Sbjct: 466 LTTVDEQMSAADA 478
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 24/220 (10%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G+ +A+ L+ + G +P V +Y + L AV K FG+A+ L G +
Sbjct: 190 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG-FGQAMEVLDEMRAKGCTPNIVT 248
Query: 308 KNLGLIEKYQSDLLADG----SRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQ 363
N+ + + + D +RLSS+ Q S V+ +CA + E +
Sbjct: 249 YNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKG------LCAAKRWEDVEE 302
Query: 364 LW----EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSL-CKKKT--LSW 416
L+ E + E D+ +V C G V R + +E M+ C T +
Sbjct: 303 LFAEMMEKNCMPNEVTFDM--LVRFFC----RGGMVERAIQVLEQMSGHGCAANTTLCNI 356
Query: 417 LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
++ K G ++DA + L M G P+ + VL+GL
Sbjct: 357 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 396
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 41/214 (19%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
EG +A++LV + SG++P++YSY NE LKG+ +A + D
Sbjct: 272 EGMVDEAVRLVETMERSGVEPDLYSY-----------NEL------LKGFCKANMV---D 311
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
+L ++E+ Q+ + D VV + C R +L+E
Sbjct: 312 RAHLMMVERMQTKGMCD------------------VVSYNTVITAFCKARRTRKGYELFE 353
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSA--VSRLLSRIEVMNSLCKKKTLSWLLRGYIKG 424
++ GK D+ + I A EGS V +LL + M L + ++ K
Sbjct: 354 -EMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKN 412
Query: 425 GHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
G ++ A M++ G+ P+ + A+L G K
Sbjct: 413 GKVDVAHSVFRDMVENGVNPDVISYNALLNGFCK 446
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 7/217 (3%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
+G Y +A + L+E KP+ Y+Y + A + + G AL + R G +
Sbjct: 257 QGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAG-ALEIFQTMQRNGCFPDTV 315
Query: 307 GKNLGLIEKY-QSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW 365
N+ LI Y ++ L D ++ ++Q G S + LL+ Y AGR EAE +
Sbjct: 316 SHNI-LINAYGRAGLYEDAEKIFK-SMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVS 373
Query: 366 EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKK---TLSWLLRGYI 422
M+ G + D +Y+ ++ + LL+++ +S K T + L++ Y
Sbjct: 374 AMERDGTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYA 433
Query: 423 KGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
+ G I A E + L L P+ A++ G K+
Sbjct: 434 QAGFIPKAEELFQGLARLKLVPDATTWTALMGGYAKK 470
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 24/220 (10%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G+ +A+ L+ + G +P V +Y + L AV K FG+A+ L G +
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG-FGQAMEVLDEMRAKGCTPNIVT 217
Query: 308 KNLGLIEKYQSDLLADG----SRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQ 363
N+ + + + D +RLSS+ Q S V+ +CA + E +
Sbjct: 218 YNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKG------LCAAKRWEDVEE 271
Query: 364 LW----EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSL-CKKKT--LSW 416
L+ E + E D+ +V C G V R + +E M+ C T +
Sbjct: 272 LFAEMMEKNCMPNEVTFDM--LVRFFC----RGGMVERAIQVLEQMSGHGCAANTTLCNI 325
Query: 417 LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
++ K G ++DA + L M G P+ + VL+GL
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 19/229 (8%)
Query: 235 GPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGK---ALR 291
P +++ +A +LV G P+VY T +++ L G+ A R
Sbjct: 44 NPANARLRRLIARDDLAEAARLVDRATSRGEAPDVY----LCTKLIRNLCRRGRTSDAAR 99
Query: 292 KLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSR--LSSWAIQEGGSSLYGVVHERLLA 349
L+ R+G+ ++ N L+ Y D +R ++S + + ++
Sbjct: 100 VLRAAERSGTAVDVFAYNT-LVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRG---- 154
Query: 350 MYIC-AGRGLEAERQLWEMKLVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNS 407
+C GR EA L +M G + Y ++L A+C S G A+ +L +
Sbjct: 155 --LCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAME-VLDEMRAKGC 211
Query: 408 LCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
T + ++ G + G ++DA E L ++ G P+ + VL+GL
Sbjct: 212 TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 8/246 (3%)
Query: 244 MMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIA 303
M G A +V + SG +P V Y + +++ + FG A+R LK G
Sbjct: 430 MCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQK-SRFGDAVRVLKEMREQGIAP 488
Query: 304 ELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQ 363
+ N +I ++ + D +R + E G + ++ YI AG A++
Sbjct: 489 DTFCYNSLIIGLSKAKKM-DEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKY 547
Query: 364 LWEMKLVGKEADGDL-YDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYI 422
+ EM G + L ++ C A S S +E L KT + L+ G +
Sbjct: 548 VKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVE-QGILGDAKTYTVLMNGLV 606
Query: 423 KGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLI 482
K G +NDA E +M G+ P+ ++ G K GN++ ++ + L
Sbjct: 607 KNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKL----GNMQKASSIFDEMVQAGLT 662
Query: 483 GPCLVY 488
++Y
Sbjct: 663 SNVIIY 668
>gi|356506793|ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Glycine max]
Length = 461
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 96/237 (40%), Gaps = 11/237 (4%)
Query: 241 AWKMMVEG----KYV-DAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKG 295
+ +M+ G YV +A+ L +L+ G P+V +Y + + K A R LK
Sbjct: 154 TYNIMINGLCKNGYVGNALSLFRNLQRHGFVPQVLTYNALINGLCKA-RRLKDARRVLKE 212
Query: 296 YVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAG 355
+ G+ + ++ L +G + S ++ G + G + ++A I G
Sbjct: 213 FGETGNEPNAVTYTTVMTCCFRCRLFEEGLEILS-EMRSLGFTFDGFAYCTVIAAMIKTG 271
Query: 356 RGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLS 415
R EAE + M G D Y+ ++ + Q RLL IE C + T +
Sbjct: 272 RMQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRLDDALRLLDEIEGEGLECDQYTHT 331
Query: 416 WLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNL 472
++ G K G+ + A L M LG + L GL K +G+++ L L
Sbjct: 332 IIVDGLCKAGNFDGAQRHLNYMNSLGFGSNLVAFNCFLDGLGK----AGHIDHALRL 384
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 160/400 (40%), Gaps = 64/400 (16%)
Query: 129 DSWC-ALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGL 187
D +C A V + K + ++ E + + + S + + R V +V DLL +M GL
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLV-EVTDLLTEMGIRGL 608
Query: 188 KPGF-------------SMIEKVISLYWEM-EKKERAVLFVKAVLSRGIAYAEGDGEGQQ 233
P M++K S Y+EM E A + + + + G+ Y G +
Sbjct: 609 TPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL-YRLGRID--- 664
Query: 234 GGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKL 293
L KM+ G + D E LK ++ A+ + L+E K
Sbjct: 665 --EANLLMQKMVDHGFFPD--------HECFLKSDIR--YAAIQKIADSLDESCKTFLLP 712
Query: 294 KGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHER-----LL 348
V +IA GL + + D D R S SL G V + L+
Sbjct: 713 NNIVYNIAIA-------GLCKTGKVD---DARRFFSML------SLKGFVPDNFTYCTLI 756
Query: 349 AMYICAGRGLEAERQLWEMKLVGKEADGDLYD-IVLAICASQNEGSAVSRLLSRIEVMNS 407
Y AG EA R EM G + Y+ ++ +C S+N A RL ++
Sbjct: 757 HGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRA-QRLFHKLHQKGL 815
Query: 408 LCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVE 467
T + L+ GY K G+++ A + KM++ G+ P + A++ GL K G++E
Sbjct: 816 FPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKH----GDIE 871
Query: 468 AYLNLCKRL----SDTSLIGPC-LVYLYIKKYKLWIIKML 502
+ L ++ D+ LI C LV YI+ ++ I L
Sbjct: 872 RSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKL 911
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 115/286 (40%), Gaps = 32/286 (11%)
Query: 187 LKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMV 246
+KP M +I Y + K + A+L+ ++ RG+A L + +
Sbjct: 213 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT--------YNLLVHALFM 264
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
+G+ +A +LV + GL P+V++Y I + KE N KAL + R G A +
Sbjct: 265 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN-VKKALEIFENMSRRGVRATVV 323
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
+ + + + +L A++ G V++ L+ + +G A + E
Sbjct: 324 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL-VLYNALINSHSTSGNIDRAFEIMGE 382
Query: 367 MKLVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNSLCKKKT----------LS 415
M+ D Y+ ++ +C LL R++ L + T +
Sbjct: 383 MEKKRIAPDDVTYNTLMRGLC-----------LLGRVDEARKLIDEMTERGIQPDLVTYN 431
Query: 416 WLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQ 461
L+ GY G + DA +M++ G P + A++QGL K Q
Sbjct: 432 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 477
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 24/220 (10%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G+ +A+ L+ + G +P V +Y + L AV K FG+A+ L G +
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG-FGQAMEVLDEMRAKGCTPNIVT 217
Query: 308 KNLGLIEKYQSDLLADG----SRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQ 363
N+ + + + D +RLSS+ Q S V+ +CA + E +
Sbjct: 218 YNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKG------LCAAKRWEDVEE 271
Query: 364 LW----EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSL-CKKKT--LSW 416
L+ E + E D+ +V C G V R + +E M+ C T +
Sbjct: 272 LFAEMMEKNCMPNEVTFDM--LVRFFC----RGGMVERAIQVLEQMSGHGCAANTTLCNI 325
Query: 417 LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
++ K G ++DA + L M G P+ + VL+GL
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 19/229 (8%)
Query: 235 GPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGK---ALR 291
P +++ +A +LV G P+VY T +++ L G+ A R
Sbjct: 44 NPANARLRRLIARDDLAEAARLVDRATSRGEAPDVY----LCTKLIRNLCRRGRTSDAAR 99
Query: 292 KLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSR--LSSWAIQEGGSSLYGVVHERLLA 349
L+ R+G+ ++ N L+ Y D +R ++S + + ++
Sbjct: 100 VLRAAERSGTAVDVFAYNT-LVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRG---- 154
Query: 350 MYIC-AGRGLEAERQLWEMKLVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNS 407
+C GR EA L +M G + Y ++L A+C S G A+ +L +
Sbjct: 155 --LCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAME-VLDEMRAKGC 211
Query: 408 LCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
T + ++ G + G ++DA E L ++ G P+ + VL+GL
Sbjct: 212 TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 148/380 (38%), Gaps = 59/380 (15%)
Query: 103 ILEEM----NDRLSARELQLVLVYFSQEGRDSWCALEVFEWLKKE----NRVD-NETMEL 153
+L+EM RL R VL S+EGR AL +F+ L++E RV N +++
Sbjct: 169 LLDEMPLPPGARLDVRAYTTVLHALSREGRYER-ALRLFDELRREGVAPTRVTYNVVLDV 227
Query: 154 MVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLF 213
+ SW + VV LL DM G++P VI+ + AV F
Sbjct: 228 YGRMGRSWPR-----------VVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAF 276
Query: 214 VKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVE-----GKYVDAIKLVIHLRESGLKPE 268
+ + +RG A + + +++ G Y +A++++ + ++G KP+
Sbjct: 277 FEDLKARGHAPC-------------VVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPD 323
Query: 269 VYSYLIALTAVVKELNEFGKALRKLKGYVRAG-SIAELDGKNL--------GLIEKYQSD 319
+Y NE + + Y A I + GK L ++ Y +
Sbjct: 324 AVTY-----------NELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNA 372
Query: 320 LLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLY 379
D + +++ G Y + +L M R L EM G + +
Sbjct: 373 GKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTW 432
Query: 380 DIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLD 439
+ +LA+C + S V+R+L ++ + T + L+ Y + G +A + +M
Sbjct: 433 NTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTA 492
Query: 440 LGLYPEYMDRVAVLQGLRKR 459
G P A+L L ++
Sbjct: 493 AGFAPCLTTYNALLNVLSRQ 512
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 139/339 (41%), Gaps = 45/339 (13%)
Query: 164 KYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERA-----VLFVKAVL 218
K++E GD+ D++ C L GF I K W ME E++ V+ ++
Sbjct: 78 KFLESMVYRGDIPDII---PCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLI 134
Query: 219 SRGIAYAEGDGEGQ-----QGGPT----GYLAWKMMVEGKYVDAIKLVIHLRESGLKPEV 269
S E D Q P + + GK A++++ + P+V
Sbjct: 135 SGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDV 194
Query: 270 YSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNL---GLIEKYQSD-LLADGS 325
+Y I + A KE + G+A++ L GS ++ N+ G+ ++ + D + +
Sbjct: 195 ITYTILIEATCKE-SGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN 253
Query: 326 RLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAI 385
+ S+ Q + H +L GR ++AE+ L +M G ++I++
Sbjct: 254 NMPSYGCQPNV-----ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINF 308
Query: 386 CASQNEGSAVSRLLSR-IEVMNSL----CKKKTLSW--LLRGYIKGGHINDAAETLTKML 438
Q LL R I+++ + C +LS+ LL G+ K ++ A E L M+
Sbjct: 309 LCRQG-------LLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 361
Query: 439 DLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLS 477
G YP+ + +L L K G V+ + + +LS
Sbjct: 362 SRGCYPDIVTYNTLLTALCK----DGKVDVAVEILNQLS 396
>gi|225456802|ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 4/210 (1%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G+Y DA K+ + + ++P+ + I +T + K+ + A + R G L+
Sbjct: 256 GRYDDAWKVYDEMETNNIRPDHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEV 315
Query: 308 KNLG-LIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
LG LI+ + + L + + + +++ G S +V+ L+ Y + R EAE E
Sbjct: 316 --LGALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGE 373
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
MK G Y+I++ + + + + LL ++ M K+ + L+ Y +
Sbjct: 374 MKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKK 433
Query: 427 IND-AAETLTKMLDLGLYPEYMDRVAVLQG 455
++D AA+ +M +G+ P A++
Sbjct: 434 MSDMAADAFLRMKKVGIKPTSHSYTALIHA 463
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 355 GRGLEAERQLWE-MKLVGKEADGDLYDI-VLAICASQNEGSAVSRLLSRIEVMNSLCKKK 412
G A ++WE M G + D Y+I V A C + A+ +L I+ L +
Sbjct: 354 GGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALG-VLENIQANRLLPTIE 412
Query: 413 TLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQ 461
T + +L GY+KGGHI A E ++ GL P + ++L GL K Q
Sbjct: 413 TYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQ 461
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 4/210 (1%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G+Y DA K+ + + ++P+ + I +T + K+ + A + R G L+
Sbjct: 256 GRYDDAWKVYDEMETNNIRPDHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEV 315
Query: 308 KNLG-LIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
LG LI+ + + L + + + +++ G S +V+ L+ Y + R EAE E
Sbjct: 316 --LGALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGE 373
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
MK G Y+I++ + + + + LL ++ M K+ + L+ Y +
Sbjct: 374 MKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKK 433
Query: 427 IND-AAETLTKMLDLGLYPEYMDRVAVLQG 455
++D AA+ +M +G+ P A++
Sbjct: 434 MSDMAADAFLRMKKVGIKPTSHSYTALIHA 463
>gi|359486048|ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic [Vitis vinifera]
gi|298204537|emb|CBI23812.3| unnamed protein product [Vitis vinifera]
Length = 659
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 87/212 (41%), Gaps = 36/212 (16%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
GK+ +++KL +++ GL+P+ +Y L +K + + KAL ++
Sbjct: 183 NGKFENSLKLFHQMKQDGLRPDAVTYSTLLAGCMKVKHGYSKALELVQ------------ 230
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
E +S L D S +YG LLA+ R EAE +
Sbjct: 231 -------EMERSRLPMD-------------SVIYGT----LLAVCASNNRCKEAENYFNQ 266
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
MK G + Y +L ++ + L+ ++ + K L+ LL+ Y++GG
Sbjct: 267 MKDEGHLPNVFHYSSLLNAYSADGDYKKADMLVQDMKSAGLVPNKVILTTLLKVYVRGGL 326
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
+ E L ++ DLG + M ++ GL K
Sbjct: 327 FEKSRELLAELEDLGYAEDEMPYCLLMDGLAK 358
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 340 YGVVHERLLAMYICAG--RG--LEAERQLWE-MKLVGKEADGDLYDI-VLAICASQNEGS 393
+GV +++ I G RG A ++WE M G + D +Y+I V A C +
Sbjct: 319 HGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDK 378
Query: 394 AVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVL 453
A+ +L IE L +T + +L GY+KGG+I A E ++ GL P + ++L
Sbjct: 379 ALG-VLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLL 437
Query: 454 QGLRKRIQ 461
GL K Q
Sbjct: 438 SGLAKARQ 445
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 22/288 (7%)
Query: 175 VVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQG 234
V+ L+ +M GLKP +I L + K + A ++ ++++GI
Sbjct: 29 VLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIV----------- 77
Query: 235 GPTGYLAWKMMVEG-KYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKL 293
+ + +++G + I+ L + K + IA TAV+ L GK +
Sbjct: 78 --PDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEAD 135
Query: 294 KGYVRAGS--IAELDGKNLGLIEKY-QSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAM 350
K + + S + + LI+ Y +S + L + +Q G + VV LA
Sbjct: 136 KVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP--NVVTYTALAD 193
Query: 351 YICA-GRGLEAERQLWEMKLVGKEADGDLYD-IVLAICASQNEGSAVSRLLSRIEVMNSL 408
+C G+ A L EM G + + Y+ +V +C S N AV +L+ +EV
Sbjct: 194 GLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV-KLMEEMEVAGMY 252
Query: 409 CKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
T + L+ Y K G + A E L +MLD GL P + ++ G
Sbjct: 253 PDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 13/227 (5%)
Query: 252 DAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLG 311
DA +++ L+ GL P V +Y + + K+ +A R +K G I +
Sbjct: 271 DARRILESLQRKGLSPNVVTYTLLVKGYCKD-GRMEEAERVVKEMKETGDIVVDEVAYGM 329
Query: 312 LIEKY-QSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLV 370
+I Y Q + D +R+ + +++ G + V+ ++ GR E ++ L EM+ V
Sbjct: 330 MINGYCQRGRMDDATRVRN-EMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDV 388
Query: 371 GKEADGDLYDIVL-AICASQNEGSAVSRL-LSRIEVMNSLCKKK-TLSWLLRGYIKGGHI 427
G D Y+ ++ C EGS + R+ V N L T + LL+G+ I
Sbjct: 389 GMRPDKYSYNTLIDGYC---REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAI 445
Query: 428 NDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCK 474
+DA ML G+ P + +L GL K +G E LNL K
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCSTLLDGLFK----AGKTEQALNLWK 488
>gi|357506483|ref|XP_003623530.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498545|gb|AES79748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 653
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
EGK +DA++++ L+E G+KP++ Y I L+ +VKE ++ K + G + ++
Sbjct: 268 EGKGMDALEILNQLKEDGIKPDIVCYTIVLSGIVKE-GDYVKLDELFDEILVLGLVPDVY 326
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
N+ + + + + ++ ++++ G V + LL +G +A+R + E
Sbjct: 327 TYNVYINGLCKQNNFDEALKIVV-SMEKLGCKPNVVTYNTLLGALCMSGDLGKAKRVMKE 385
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
M+L G E + Y I+L + E LL + + T ++ + G
Sbjct: 386 MRLKGVELNLHTYRIMLDGLVGKGEIGEACVLLEEMLEKCFYPRSSTFDSIVHQMCQKGL 445
Query: 427 INDAAETLTKMLDLGLYP 444
I+DA + K++ P
Sbjct: 446 ISDALVLMNKIVAKSFDP 463
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 139/339 (41%), Gaps = 45/339 (13%)
Query: 164 KYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERA-----VLFVKAVL 218
K++E GD+ D++ C L GF I K W ME E++ V+ ++
Sbjct: 135 KFLESMVYRGDIPDII---PCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLI 191
Query: 219 SRGIAYAEGDGEGQ-----QGGPT----GYLAWKMMVEGKYVDAIKLVIHLRESGLKPEV 269
S E D Q P + + GK A++++ + P+V
Sbjct: 192 SGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDV 251
Query: 270 YSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNL---GLIEKYQSD-LLADGS 325
+Y I + A KE + G+A++ L GS ++ N+ G+ ++ + D + +
Sbjct: 252 ITYTILIEATCKE-SGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN 310
Query: 326 RLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAI 385
+ S+ Q + H +L GR ++AE+ L +M G ++I++
Sbjct: 311 NMPSYGCQPNV-----ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINF 365
Query: 386 CASQNEGSAVSRLLSR-IEVMNSL----CKKKTLSW--LLRGYIKGGHINDAAETLTKML 438
Q LL R I+++ + C +LS+ LL G+ K ++ A E L M+
Sbjct: 366 LCRQG-------LLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 418
Query: 439 DLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLS 477
G YP+ + +L L K G V+ + + +LS
Sbjct: 419 SRGCYPDIVTYNTLLTALCK----DGKVDVAVEILNQLS 453
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 7/217 (3%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
+G Y +A + L+E KP+ Y+Y + A + + G AL + R G +
Sbjct: 257 QGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAG-ALEIFQTMQRNGCFPDTV 315
Query: 307 GKNLGLIEKY-QSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW 365
N+ LI Y ++ L D ++ ++Q G S + LL+ Y AGR EAE +
Sbjct: 316 SHNI-LINAYGRAGLYEDAEKIFK-SMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVS 373
Query: 366 EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKK---TLSWLLRGYI 422
M+ G + D +Y+ ++ + LL+++ +S K T + L++ Y
Sbjct: 374 AMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYA 433
Query: 423 KGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
+ G I A E + L L P+ A++ G K+
Sbjct: 434 QAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKK 470
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 13/227 (5%)
Query: 252 DAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLG 311
DA +++ L+ GL P V +Y + + K+ +A R +K G I +
Sbjct: 271 DARRILESLQRKGLSPNVVTYTLLVKGYCKD-GRMEEAERVVKEMKETGDIVVDEVAYGM 329
Query: 312 LIEKY-QSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLV 370
+I Y Q + D +R+ + +++ G + V+ ++ GR E ++ L EM+ V
Sbjct: 330 MINGYCQRGRMDDATRVRN-EMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDV 388
Query: 371 GKEADGDLYDIVL-AICASQNEGSAVSRL-LSRIEVMNSLCKKK-TLSWLLRGYIKGGHI 427
G D Y+ ++ C EGS + R+ V N L T + LL+G+ I
Sbjct: 389 GMRPDKYSYNTLIDGYC---REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAI 445
Query: 428 NDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCK 474
+DA ML G+ P + +L GL K +G E LNL K
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCSTLLDGLFK----AGKTEQALNLWK 488
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 91/223 (40%), Gaps = 23/223 (10%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
GKY AI++ + ESGL P + +Y + L K + K L L E+
Sbjct: 236 GKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLD---------EMRS 286
Query: 308 KNLGLIEKYQSDLLA--------DGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLE 359
+ L E S +L+ D +R ++ G V + LL ++ AG E
Sbjct: 287 RGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSE 346
Query: 360 AERQLWEMKLVGKEADGDLYDIVLAI---CASQNEGSAVSRLLSRIEVMNSLCKKKTLSW 416
A L EM+ D Y+ V+A EG+ V ++ +M + T +
Sbjct: 347 ALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAV---TYTT 403
Query: 417 LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
++ Y + G I+ A E +M++LG P AVL L K+
Sbjct: 404 IINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKK 446
>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 957
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 29/247 (11%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRA-GSIAEL 305
EG++ DA L+ ++ G+ + +Y +L A +K N LKG + G + E
Sbjct: 627 EGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGN--------LKGALEVYGEMQEA 678
Query: 306 D----GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYG---VVHERLLAMYICAGRGL 358
D K ++ S L G + ++ + SS G + + +++ Y CAGR
Sbjct: 679 DIEPSAKTYTILISLFSKLGDLGRAVQAFEVL--NSSEVGADEIAYSQMIHCYGCAGRPK 736
Query: 359 EAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLL 418
EA EM+ G + + +Y+ +L A + LLS ++ C ++++LL
Sbjct: 737 EAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLLS--DMRRKGCPPSSVTYLL 794
Query: 419 --RGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRL 476
Y G DA L M D GLYP+ + + I+ GNV + C+
Sbjct: 795 LMSAYGSKGKPADAESLLHLMQDRGLYPD-------CRHYNEVIRAYGNVGKLSDACRIF 847
Query: 477 SDTSLIG 483
+ +G
Sbjct: 848 YELKTVG 854
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 132/330 (40%), Gaps = 29/330 (8%)
Query: 133 ALEVFEWLKKEN-RVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGF 191
A+E + K N DN T ++ +C ++ +GD DLL+DM GL P
Sbjct: 227 AVEFLNVMGKYNCSPDNVTYNTILDTLC--------KKGRLGDARDLLMDMKSRGLLPNR 278
Query: 192 SMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMV----- 246
+ ++ Y +M + A ++ + + P + + M++
Sbjct: 279 NTYNILVYGYCKMGWLKEAANVIELMTQNNLL------------PDVW-TYNMLINGLCN 325
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
EG+ +A KL + L P+V SY + + E ++ +A + L+ G
Sbjct: 326 EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCL-EWSKISEAFKLLEEMSEKGVKPNAV 384
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
N+ +++ Y + D + + ++E G S V + L+ Y AG EA R + E
Sbjct: 385 THNI-MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
M + D + +L + + +LLS + + L+ GY K G+
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN 503
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
++ A + +M + + P + ++ GL
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 10/214 (4%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
EGK DA + + ESG P+ +Y + K N G+A R + R ++D
Sbjct: 396 EGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN-MGEAFRTMDEMGRKN--MKMD 452
Query: 307 GKNLGLIEKY--QSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQL 364
L I + + L + +L S A ++ G + V + L+ Y G ++ +L
Sbjct: 453 SVTLNTILRTLCREKKLEEAYKLLSSA-RKRGYFIDEVSYGTLIVGYFKDG-NVDRALKL 510
Query: 365 W-EMKLVGKEADGDLYDIVLA-ICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYI 422
W EMK Y+ ++ +C A+S+L +E L + T + +L GY
Sbjct: 511 WDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES-GLLPDETTYNTILHGYC 569
Query: 423 KGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
+ G + A + KM++ P+ +L+GL
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGL 603
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 42/171 (24%)
Query: 342 VVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSR 401
V + ++ Y AG+ +A +L +M+ G EAD Y ++ C + ++ + L
Sbjct: 258 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQE 317
Query: 402 IE-------------VMNSLCKKKTL----------------------SWLLRGYIKGGH 426
++ V+ LCK+ L + L+ GY K G
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEA---YLNLCK 474
+ DA L +M+D G P+ + V+ GL K +G VE Y + C+
Sbjct: 378 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK----NGRVEEALDYFHTCR 424
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 42/171 (24%)
Query: 342 VVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSR 401
V + ++ Y AG+ +A +L +M+ G EAD Y ++ C + ++ + L
Sbjct: 240 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQE 299
Query: 402 IE-------------VMNSLCKKKTL----------------------SWLLRGYIKGGH 426
++ V+ LCK+ L + L+ GY K G
Sbjct: 300 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 359
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEA---YLNLCK 474
+ DA L +M+D G P+ + V+ GL K +G VE Y + C+
Sbjct: 360 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK----NGRVEEALDYFHTCR 406
>gi|124360264|gb|ABN08277.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 368
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 89/218 (40%), Gaps = 36/218 (16%)
Query: 244 MMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIA 303
++ +GK+ +KL ++ GL P++ +Y + VK + + KAL
Sbjct: 148 LIKKGKFDTTMKLFRQMKHDGLVPDLVTYSTLIAGCVKVKDGYPKALE------------ 195
Query: 304 ELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQ 363
LI++ Q + L + V++ +LA+ G+ EAE
Sbjct: 196 --------LIQELQDNKL----------------RMDDVIYGAILAVCASNGKWEEAEYY 231
Query: 364 LWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIK 423
+MK G+ + Y +L ++ + + L+ +E K L+ LL+ Y++
Sbjct: 232 FNQMKSEGRSPNVYHYSSLLNAYSACGDFTKADALIQDMESEGLAPNKVILTTLLKVYVR 291
Query: 424 GGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQ 461
GG + E L K+ LG + M ++ GL K Q
Sbjct: 292 GGLFEKSRELLAKLESLGYAEDEMPYCVLMDGLAKARQ 329
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 13/233 (5%)
Query: 232 QQGGPTGYLAWKMMVEG-----KYVDAIKLVIHLRESGLKP--EVYSYLIALTAVVKELN 284
Q+GG A+ M+ G K A+ ++ + ESG KP +VY+ LI +
Sbjct: 122 QEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFE 181
Query: 285 EFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVH 344
+ + ++L + +I + GL + + A+ L +++G + V+
Sbjct: 182 DAIRVFKELGTRHCSPTIVTYNTLINGLC---KGERFAEAYDLVKEMLEKGWNP--SVIT 236
Query: 345 ERLLAMYICAGRGLEAERQLWEMKLV-GKEADGDLYDIVLAICASQNEGSAVSRLLSRIE 403
LL +C +E QLW + G + D +++I++ S + S L +
Sbjct: 237 YSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMN 296
Query: 404 VMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
N T + L+ G+ KGG +A ++L GL P+ + L+GL
Sbjct: 297 HWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGL 349
>gi|449490189|ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g14080-like [Cucumis sativus]
Length = 640
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 351 YIC-AGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLC 409
++C AG+ EA L EMK G + D Y+ VL C ++ +L +
Sbjct: 407 FLCKAGKVKEAYGVLQEMKKNGFDPDVSFYNSVLEACCREDLLRPARKLWDEMFAGGCCG 466
Query: 410 KKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQ------- 462
KT S L++ + K I +A + ML + P+ ++LQGL + Q
Sbjct: 467 NLKTYSILIQKFSKSNQIEEALVLYSHMLGKNVEPDIAIYTSLLQGLCQDSQLEAAFEVF 526
Query: 463 SGNVEAYLNLCKRLSDTSLIGPCLVYLYIKKYKL 496
S +VE +NL L T ++ C V ++ KL
Sbjct: 527 SKSVEQDVNLAATLLSTFILCLCKVGHFLAASKL 560
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 18/227 (7%)
Query: 252 DAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRK--LKGYVRAGSIAELDGKN 309
+A+ + + + G+ P+V ++ T+++ + G R L G +R + +
Sbjct: 278 EALAVFAEMAQKGVVPDVVTF----TSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTF 333
Query: 310 LGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKL 369
LI+ + + D + L+ ++E V + L+ Y GR EA + EM+
Sbjct: 334 TALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEA 393
Query: 370 VGKEADGDLYDIVLA-ICASQNEGSAVS---RLLSRIEVMNSLCKKKTLSWLLRGYIKGG 425
G + D Y +L+ C + SA ++L + V +++ T S L+RG +
Sbjct: 394 KGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAI----TYSSLIRGLCEER 449
Query: 426 HINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNL 472
+ DA E KML LGL P+ ++ G K GNV+ L+L
Sbjct: 450 RLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKE----GNVQKALSL 492
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 132/330 (40%), Gaps = 29/330 (8%)
Query: 133 ALEVFEWLKKEN-RVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGF 191
A+E + K N DN T ++ +C ++ +GD DLL+DM GL P
Sbjct: 227 AVEFLNVMGKYNCSPDNVTYNTILDALC--------KKGRLGDARDLLMDMKSRGLLPNR 278
Query: 192 SMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMV----- 246
+ ++ Y +M + A ++ + + P + + M++
Sbjct: 279 NTYNILVYGYCKMGWLKEAANVIELMTQNNLL------------PDVW-TYNMLINGLCN 325
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
EG+ +A KL + L P+V SY + + E ++ +A + L+ G
Sbjct: 326 EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCL-EWSKISEAFKLLEEMSEKGVKPNAV 384
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
N+ +++ Y + D + + ++E G S V + L+ Y AG EA R + E
Sbjct: 385 THNI-MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
M + D + +L + + +LLS + + L+ GY K G+
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN 503
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
++ A + +M + + P + ++ GL
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 10/214 (4%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
EGK DA + + ESG P+ +Y + K N G+A R + R ++D
Sbjct: 396 EGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN-MGEAFRTMDEMGRKN--MKMD 452
Query: 307 GKNLGLIEKY--QSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQL 364
L I + + L + +L S A ++ G + V + L+ Y G ++ +L
Sbjct: 453 SVTLNTILRTLCREKKLEEAYKLLSSA-RKRGYFIDEVSYGTLIVGYFKDG-NVDRALKL 510
Query: 365 W-EMKLVGKEADGDLYDIVLA-ICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYI 422
W EMK Y+ ++ +C A+S+L +E L + T + +L GY
Sbjct: 511 WDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES-GLLPDETTYNTILHGYC 569
Query: 423 KGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
+ G + A + KM++ P+ +L+GL
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGL 603
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 8/196 (4%)
Query: 264 GLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLAD 323
G VY+Y I L + + L EFGKA+ L+ + + ++ N + + L
Sbjct: 137 GFAFNVYNYNILLKGLCRNL-EFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195
Query: 324 GSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL 383
+L++ +Q G S V L+ + AG+ EA L EMK G EAD +Y ++
Sbjct: 196 ALQLAN-EMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLI 254
Query: 384 ---AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDL 440
C + G A+ +E +S C T + L+RG+ K G + +A+E M++
Sbjct: 255 RGFCDCGELDRGKAL--FDEVLERGDSPC-AITYNTLIRGFCKLGRLKEASEIFEFMMER 311
Query: 441 GLYPEYMDRVAVLQGL 456
G+ P ++ GL
Sbjct: 312 GVRPNVYTYTGLIDGL 327
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 103/257 (40%), Gaps = 51/257 (19%)
Query: 252 DAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLG 311
+AIK+ +++ GLKP + +Y + A K EF + L +R G
Sbjct: 130 EAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNG----------- 178
Query: 312 LIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGL-EAERQLWEMKLV 370
Q D + S L+ +C+ GL EA R L ++V
Sbjct: 179 ----MQPDRITFNSLLA-----------------------VCSKGGLWEAARSL-SCEMV 210
Query: 371 GKEADGDL--YDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHIN 428
+ D D+ Y+ +L + ++S + N L T S ++ GY K G ++
Sbjct: 211 NRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLD 270
Query: 429 DAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGPCLVY 488
DA +M LG+ +DRV+ L + G E +++C+ + ++ + + Y
Sbjct: 271 DARNLFNEMKFLGI---SLDRVS-YNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTY 326
Query: 489 L-----YIKKYKLWIIK 500
Y K+YK +++
Sbjct: 327 NALLGGYGKQYKYDVVR 343
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 112/247 (45%), Gaps = 34/247 (13%)
Query: 240 LAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGK---ALRKLKGY 296
+ + + + G +A +++ +R +GLK V ++ T+++K L GK A R LK
Sbjct: 362 IIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATH----TSILKGLCVVGKLDDAARHLKEM 417
Query: 297 VRAGSIAELDGKNLGLI-EKYQSDLLADGS-----RLSSWAIQEGGSSLYGVVHERLLAM 350
V G E D K G++ +Y AD + + S I SS V R+L
Sbjct: 418 VGLG--MEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVF--RIL-- 471
Query: 351 YICAGRGLEAERQLWEMKLVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNSLC 409
+ +G+ +A L +MK +G + Y V+ +C ++ R+ E ++ +C
Sbjct: 472 -VESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAK------GRMHEVEEFVDDMC 524
Query: 410 KK------KTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQS 463
+ SWL++GY + G+ + A +MLD+G +A ++GL + +++
Sbjct: 525 RNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSAK-EKA 583
Query: 464 GNVEAYL 470
VE +
Sbjct: 584 FEVEKFF 590
>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 457
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 109/274 (39%), Gaps = 23/274 (8%)
Query: 176 VDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGG 235
+DL +M G++P ++ Y+ + K E A + + RG Y
Sbjct: 97 LDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIY----------- 145
Query: 236 PTGYLAWKMMVEG----KYVD-AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKAL 290
P+ ++ +M+ G YV+ A+ L +LR G PEV +Y + + K A
Sbjct: 146 PS-MASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKA-RRLADAR 203
Query: 291 RKLKGYVRAGSIAELDGKNLGLIEK--YQSDLLADGSRLSSWAIQEGGSSLYGVVHERLL 348
R L + G E + + K ++ L G + S ++ G + G + ++
Sbjct: 204 RVLNEFCDFG--FEPNAITYTTVMKCCFRCGRLEQGLEILS-EMRRKGFTFDGFAYCTVV 260
Query: 349 AMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSL 408
A + GR EA+ +M G D Y+ ++ + Q RL+ IE
Sbjct: 261 AALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMK 320
Query: 409 CKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGL 442
C + T + ++ G K G+ A + L M LG
Sbjct: 321 CDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGF 354
>gi|357493977|ref|XP_003617277.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518612|gb|AET00236.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 502
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 27/236 (11%)
Query: 254 IKLVIHLRE---SGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNL 310
+K+ ++L E GLKP +++Y + + KE + A L + G + N
Sbjct: 123 VKVRVYLSEMEAKGLKPGLFTYNALINGLCKE-GGYESAKCVLDKMLGVGFCPDAATFNP 181
Query: 311 GLIEKYQSDLLADGSRLSSWAIQEG-------GSSLYGVVHERLLAMYICAGRGLEAERQ 363
L+E ++ + + + R+ + +Q G SS+ GV G A
Sbjct: 182 VLVESFRKEDVWEAERVFNEMLQCGVVPDLISFSSIIGVFSRN--------GELGRALAY 233
Query: 364 LWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLRGY 421
+MK VG D +Y I++ N+ S ++ R E++ C +++ LL G
Sbjct: 234 FEKMKGVGLVPDTVIYTILINGYCRNNDVSGALKV--RNEMVERSCVMDVVTYNTLLNGL 291
Query: 422 IKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLS 477
+G ++DA E +M++ G++P++ ++ G K GN+ L+L + ++
Sbjct: 292 CRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCK----DGNMTKALSLFETIT 343
>gi|356522073|ref|XP_003529674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 685
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 332 IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW---EMKLVGKEADGDLYDIVLAICAS 388
+ G S V + LL Y GRG +E L+ EMK G E + LY+ +LA+CA
Sbjct: 328 MTNNGFSPNWVTYASLLRAY---GRGRYSEDALFVYKEMKEKGMEMNTHLYNTLLAMCAD 384
Query: 389 QNEGSAVSRLLSRIEV-MNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYM 447
+ + ++ LC T S L+ Y G++++A L +M++ G P
Sbjct: 385 LGLANEAFEIFEDMKTSATCLCDSWTFSSLITIYSCTGNVSEAERMLNEMIESGSQPTIF 444
Query: 448 DRVAVLQ 454
+++Q
Sbjct: 445 VLTSLVQ 451
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 8/200 (4%)
Query: 260 LRESGLKPEV--YSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQ 317
+ ESG+ P++ YSYL+ + L + + LR+++ G++ ++ N+ L+E Y
Sbjct: 268 MNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMES---GGNLPDITSYNV-LLEAY- 322
Query: 318 SDLLADGSRLSSW-AIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADG 376
++L + + + +Q G + LL +Y GR + EMK+ + D
Sbjct: 323 AELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDA 382
Query: 377 DLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTK 436
Y+I++ + V L + N +T L+ KGG DA + L
Sbjct: 383 GTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLH 442
Query: 437 MLDLGLYPEYMDRVAVLQGL 456
M + G+ P V++
Sbjct: 443 MNEKGIVPSSKAYTGVIEAF 462
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 106/252 (42%), Gaps = 22/252 (8%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G + A +L + E G++P V I L +V L + G+ R ++ + E+ G
Sbjct: 407 GNFDRAHELFRQMNEEGVQPNV----ITLNTLVDGLCKHGRVHRAVEFF------NEMKG 456
Query: 308 KNL-GLIEKYQSDLLA-DGSRLSSWAIQ------EGGSSLYGVVHERLLAMYICAGRGLE 359
K L G Y + + A G + A+Q G S VV+ L++ AGR +
Sbjct: 457 KGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMND 516
Query: 360 AERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLR 419
A + ++KL G D Y+++++ + + V LL+ +E T + L+
Sbjct: 517 ASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLIS 576
Query: 420 GYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDT 479
K G A++ + KM+ GL P + A++ + NV+ + + + T
Sbjct: 577 YLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSK----KNVDEGMKIFGEMCST 632
Query: 480 SLIGPCLVYLYI 491
S + P V I
Sbjct: 633 SKVPPNTVIYNI 644
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 125/320 (39%), Gaps = 54/320 (16%)
Query: 178 LLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEG------DGEG 231
L+ M + + P + ++ E E+ A F+K + S+G+ G
Sbjct: 173 LICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYC 232
Query: 232 QQGG-PTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIAL------------TA 278
QG TG WK+++E KY+ G+KP+V +Y I + T+
Sbjct: 233 SQGNIDTG---WKLLMEMKYL------------GIKPDVVAYTIVIDSLCKMSLLKEATS 277
Query: 279 VVKELNEFGKAL------RKLKGYVRAGSIAE-LD-------GKNLGLIEKYQSDLLADG 324
++ ++ + G L + GY + G E +D N+ + + S L DG
Sbjct: 278 ILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCTDG 337
Query: 325 SRLSSWAIQEGGSSLYGVV-----HERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLY 379
+ L + + + + G++ + ++A Y A + L +M G Y
Sbjct: 338 NMLKAAKVFQDMCEM-GLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATY 396
Query: 380 DIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLD 439
+++ C L R+ + + + L+ GY K GH+ A E L+ M
Sbjct: 397 TLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRS 456
Query: 440 LGLYPEYMDRVAVLQGLRKR 459
G+ P+ + ++ GL KR
Sbjct: 457 AGVSPDLVTYNILIHGLIKR 476
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 4/136 (2%)
Query: 355 GRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
GR EA L M G D LY V+ Q + + LL+ + +M T
Sbjct: 189 GRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTF 248
Query: 415 SWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCK 474
++RG G + +AA + +M+ G P M +LQGL R++Q+ A L
Sbjct: 249 DDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL-CRVRQADEARAMLGRVP 307
Query: 475 RLSD---TSLIGPCLV 487
L+ ++IG CL
Sbjct: 308 ELNVVLFNTVIGGCLA 323
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 39/243 (16%)
Query: 252 DAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLG 311
D IKL+ + E+GL +Y + ++ + A L+ V +G + N
Sbjct: 379 DGIKLLHEMTEAGLVANTITYTTLIHGFC-QVGDLNAAQDLLQEMVSSGVCPNVVTCNTL 437
Query: 312 LIEKYQSDLLADGSRLSSW-----AIQ------EGGSSLYGV-----VHERLLAMYICAG 355
L D L D +L A+Q + GV + L++ I G
Sbjct: 438 L------DGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEG 491
Query: 356 RGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKK--- 412
+ LEAE EM G D Y+ V+ Q SRL ++ +S+ K
Sbjct: 492 KFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQ------SRLDEATQMFDSMGSKSFSP 545
Query: 413 ---TLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAY 469
T + L+ GY K G ++D E +M G+ + + ++ G RK GN+
Sbjct: 546 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRK----VGNINGA 601
Query: 470 LNL 472
L++
Sbjct: 602 LDI 604
>gi|224133698|ref|XP_002321639.1| predicted protein [Populus trichocarpa]
gi|222868635|gb|EEF05766.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 296 YVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAG 355
Y+ S+A D +L L+ + + DG + + G+SL V++ + + AG
Sbjct: 186 YILLRSVAASDNPDLDLVSR-----VVDGYKAT-------GNSLSKSVYDGMHRSFTSAG 233
Query: 356 RGLEAERQLWEMKLVGKEADGDLYD-IVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
+ EAE+ + M+ G E D Y +V +C S+ A ++L +E + KT
Sbjct: 234 KFDEAEKIVKAMRDAGYEPDNITYSQLVFGLCKSKRLEEAC-KVLDEMEAGGCIPDIKTW 292
Query: 415 SWLLRGYIKGGHINDAAETLTKMLDLGLYPE 445
+ L++G+ ++ L KM + P+
Sbjct: 293 TILIQGHFAANQVDKGLLCLVKMTEKNTDPD 323
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 355 GRGLEAERQLWE-MKLVGKEADGDLYDI-VLAICASQNEGSAVSRLLSRIEVMNSLCKKK 412
G A ++WE M G + D +Y+I V A C + A+ +L IE L +
Sbjct: 240 GGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALG-VLENIEANRLLPTIE 298
Query: 413 TLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQ 461
T + +L GY+KGG+I A E ++ GL P + ++L GL K Q
Sbjct: 299 TYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQ 347
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 157/388 (40%), Gaps = 72/388 (18%)
Query: 109 DRLSARELQLVLVYF----SQEGRDSWC-ALEVFEWL--KKENRVDNETMELMVSIMCSW 161
D L AR +Q+ + G++SW ALEVFEWL + + + + ++ ++ W
Sbjct: 145 DILDARPVQMTPTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRW 204
Query: 162 ------VKKYIEEERGVGDVVDLLVDMDCVGLKPG-FSMIEKVISLYWEMEKKERAVLFV 214
V+ + E VGD V + M V + G FS ++++ + + F
Sbjct: 205 NQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFN 264
Query: 215 KAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLI 274
+ +R + GG T L ++L+ +R SGL+P+ +Y
Sbjct: 265 TLINARL----------KSGGLTPNLV------------VELLDMVRNSGLRPDAITYNT 302
Query: 275 ALTAVVKELNEFG--KALRKLKG----------------YVRAGSIAELDGKNLGL-IEK 315
L+A ++ N G K ++ Y R G AE + + L ++
Sbjct: 303 LLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKG 362
Query: 316 YQSDLLADGSRLSSWA--------------IQEGGSSLYGVVHERLLAMYICAGRGLEAE 361
+ D + S L ++A +Q+ G + + ++ MY G+ L+
Sbjct: 363 FSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQ-LDLA 421
Query: 362 RQLW-EMK-LVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLR 419
QL+ +MK L G+ D Y +++ N + L+S + + +T S L+
Sbjct: 422 LQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALIC 481
Query: 420 GYIKGGHINDAAETLTKMLDLGLYPEYM 447
GY K G +A +T + ML G P+ +
Sbjct: 482 GYAKAGKREEAEDTFSCMLRSGTKPDNL 509
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 157/391 (40%), Gaps = 82/391 (20%)
Query: 109 DRLSARELQLVLVYF----SQEGRDSWC-ALEVFEW--LKKENRVDNETMELMVSIMCSW 161
D L AR +Q+ + G++SW ALEVFEW L+ + + + ++ ++ W
Sbjct: 145 DILDARLVQMTPTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRW 204
Query: 162 ------VKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVK 215
V+ + E VGD V + M + +Y K +A V
Sbjct: 205 NQESLAVEIFTRAEPTVGDRVQVYNAM---------------MGVYSRSGKFSKAQELVD 249
Query: 216 AVLSRG-----IAYAE-GDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEV 269
A+ RG I++ + + GG T L A++L+ +R SGL+P+
Sbjct: 250 AMRQRGCVPDLISFNTLINARLKSGGLTPNL------------AVELLDMVRNSGLRPDA 297
Query: 270 YSYLIALTAVVKELNEFG--KALRKLKG----------------YVRAGSIAELDGKNLG 311
+Y L+A ++ N G K ++ Y R G AE + +
Sbjct: 298 ITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFME 357
Query: 312 L-IEKYQSDLLADGSRLSSWA--------------IQEGGSSLYGVVHERLLAMYICAGR 356
L ++ + D + S L ++A +Q+ G + + ++ MY G+
Sbjct: 358 LELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQ 417
Query: 357 GLEAERQLW-EMK-LVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
L+ QL+ +MK L G+ D Y +++ N + L+S + + +T
Sbjct: 418 -LDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTY 476
Query: 415 SWLLRGYIKGGHINDAAETLTKMLDLGLYPE 445
S L+ GY K G +A +T + ML G P+
Sbjct: 477 SALICGYAKAGKREEAEDTFSCMLRSGTKPD 507
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 8/200 (4%)
Query: 260 LRESGLKPEV--YSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQ 317
+ ESG+ P++ YSYL+ + L + + LR+++ G++ ++ N+ L+E Y
Sbjct: 266 MNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMEC---GGNLPDITSYNV-LLEAY- 320
Query: 318 SDLLADGSRLSSW-AIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADG 376
++L + + + +Q G + LL +Y GR + EMK+ + D
Sbjct: 321 AELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDA 380
Query: 377 DLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTK 436
Y+I++ + V L + N +T L+ KGG DA + L
Sbjct: 381 GTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLH 440
Query: 437 MLDLGLYPEYMDRVAVLQGL 456
M + G+ P V++
Sbjct: 441 MNEKGVVPSSKAYTGVIEAF 460
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 12/220 (5%)
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFG---KALRKLKGYVRAGSIAELDGKN 309
A+K+ + ++ G +P +++Y T+++ L + G KA + G +A N
Sbjct: 178 ALKVFLDMKSRGCRPNIFTY----TSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYN 233
Query: 310 LGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKL 369
LI AD + + G V L+ AGR EA R E +
Sbjct: 234 -SLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARD 292
Query: 370 VGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHIN 428
VG D +LY++++ +C S+ A + +E + T + L+ G K G I+
Sbjct: 293 VGCALDVNLYNVLIDTLCKSKRLDEAWE-IFGELEEDGLVPDVYTFNALMDGLCKSGRIH 351
Query: 429 DAAETLTKMLDLGLYPEYMDRVAVLQGLRK--RIQQSGNV 466
DA L M G P+ ++ GLRK R++++G +
Sbjct: 352 DAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQL 391
>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like, partial [Glycine max]
Length = 594
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 13/161 (8%)
Query: 133 ALEVFE-WLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGF 191
A ++F W+ K+N VD T M+S +C +E + + DL+ DM+ +P
Sbjct: 437 AFKLFNSWISKQNSVDVVTYNTMISYLC--------KEGRLDEAFDLMTDMEVKKFEPDQ 488
Query: 192 SMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWK----MMVE 247
++ + E A F+ + G A D + + + + + +
Sbjct: 489 YTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQ 548
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGK 288
GKY +A+KL + G+ Y+Y+ + +K K
Sbjct: 549 GKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFLKRRKSISK 589
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 158/393 (40%), Gaps = 82/393 (20%)
Query: 109 DRLSARELQLVLVYF----SQEGRDSWC-ALEVFEW--LKKENRVDNETMELMVSIMCSW 161
D L AR +Q+ + G++SW ALEVFEW L+ + + + ++ ++ W
Sbjct: 145 DILDARLVQMTPTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRW 204
Query: 162 ------VKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVK 215
V+ + E VGD V + M + +Y K +A V
Sbjct: 205 NQESLAVEIFTRAEPTVGDRVQVYNAM---------------MGVYSRSGKFSKAQELVD 249
Query: 216 AVLSRG-----IAYAE-GDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEV 269
A+ RG I++ + + GG T L A++L+ +R SGL+P+
Sbjct: 250 AMRQRGCVPDLISFNTLINARLKSGGLTPNL------------AVELLDMVRNSGLRPDA 297
Query: 270 YSYLIALTAVVKELNEFG--KALRKLKG----------------YVRAGSIAELDGKNLG 311
+Y L+A ++ N G K ++ Y R G AE + +
Sbjct: 298 ITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFME 357
Query: 312 L-IEKYQSDLLADGSRLSSWA--------------IQEGGSSLYGVVHERLLAMYICAGR 356
L ++ + D + S L ++A +Q+ G + + ++ MY G+
Sbjct: 358 LELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQ 417
Query: 357 GLEAERQLW-EMK-LVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
L+ QL+ +MK L G+ D Y +++ N + L+S + + +T
Sbjct: 418 -LDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTY 476
Query: 415 SWLLRGYIKGGHINDAAETLTKMLDLGLYPEYM 447
S L+ GY K G +A +T + ML G P+ +
Sbjct: 477 SALICGYAKAGKREEAEDTFSCMLRSGTKPDNL 509
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 122/313 (38%), Gaps = 48/313 (15%)
Query: 181 DMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVL-SRGIAYAEGDGEGQQGGPTGY 239
+M GLKP ++ +I + E VL +K V+ S GI P
Sbjct: 323 EMQKTGLKPDYNACSALIDGFMR-EGDIDEVLRIKDVMVSCGI-------------PINL 368
Query: 240 LAWKMMVEG-----KYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLK 294
+ + +++ G K A +++ + G KP ++ + + +E N G+AL L
Sbjct: 369 ITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHN-MGRALELLD 427
Query: 295 GYVRAGSI-------AELDG----KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVV 343
+ + A ++G K+L L K + G + + VV
Sbjct: 428 EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNV------------VV 475
Query: 344 HERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIE 403
+ L+ Y GR EA R L M G D Y+ +++ + + S L I+
Sbjct: 476 YSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 535
Query: 404 VMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQS 463
T + GY K G + +AA+ +MLD GL P ++ G K +
Sbjct: 536 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK----A 591
Query: 464 GNVEAYLNLCKRL 476
GN+ L++ +RL
Sbjct: 592 GNLMEALSIFRRL 604
>gi|242089955|ref|XP_002440810.1| hypothetical protein SORBIDRAFT_09g007230 [Sorghum bicolor]
gi|241946095|gb|EES19240.1| hypothetical protein SORBIDRAFT_09g007230 [Sorghum bicolor]
Length = 73
Score = 42.0 bits (97), Expect = 0.69, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 151 MELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMI 194
MELM +I+C +++ + + + DV LL +MDCV L P FS++
Sbjct: 1 MELMAAIVCGRIERLVGADGDIADVATLLGEMDCVRLWPEFSLV 44
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 10/200 (5%)
Query: 264 GLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLAD 323
G+ P+++SY I + A KE +A +K R+ + N LI+ Y S
Sbjct: 251 GILPDIFSYTIMVNAYCKE-GRVDEAFNFVKEMERSCCEPNVVTYN-SLIDGYVSLGDVC 308
Query: 324 GSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL 383
G++ + E G + L+ Y G+ +AE+ M D +Y +++
Sbjct: 309 GAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLI 368
Query: 384 -AICASQNEGSAVSRLLSRIEV---MNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLD 439
A C + A+ + ++V MN++ + L+ GY K GH+N AAE L M D
Sbjct: 369 HAYCTAGRVDDALRIRDAMLKVGLKMNTV----ICNSLINGYCKLGHVNKAAEVLVSMKD 424
Query: 440 LGLYPEYMDRVAVLQGLRKR 459
L P+ +L G K+
Sbjct: 425 WNLKPDSYGYNTLLDGFCKQ 444
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 10/200 (5%)
Query: 264 GLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLAD 323
G+ P+++SY I + A KE +A +K R+ + N LI+ Y S
Sbjct: 251 GILPDIFSYTIMVNAYCKE-GRVDEAFNFVKEMERSCCEPNVVTYN-SLIDGYVSLGDVC 308
Query: 324 GSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL 383
G++ + E G + L+ Y G+ +AE+ + M D +Y +++
Sbjct: 309 GAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLI 368
Query: 384 -AICASQNEGSAVSRLLSRIEV---MNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLD 439
A C + A+ + ++V MN++ + L+ GY K GH+N AAE L M D
Sbjct: 369 HAYCTAGRVDDALRIRDAMLKVGLKMNTV----ICNSLINGYCKLGHVNKAAEVLVSMKD 424
Query: 440 LGLYPEYMDRVAVLQGLRKR 459
L P+ +L G K+
Sbjct: 425 WNLKPDSYGYNTLLDGFCKQ 444
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 23/219 (10%)
Query: 249 KYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAG---SIAEL 305
K +D+I++ +++ KP SY I++ A++ E N+ A R + + G ++ L
Sbjct: 129 KPLDSIRVFHKMQDFHCKPTEKSY-ISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSL 187
Query: 306 D------GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGL- 358
+ KN G ++K R S E S YG L +C R +
Sbjct: 188 NVLIKAFCKNSGTMDKAMHLF-----RTMSNHGCEPDSYTYGT-----LINGLCRFRSIV 237
Query: 359 EAERQLWEMKLVGKEADGDLY-DIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWL 417
EA+ L EM+ G Y I+ +C N A+ RLL ++ N T S L
Sbjct: 238 EAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAM-RLLEDMKDKNIEPNVFTYSSL 296
Query: 418 LRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
+ G+ K GH + A + L M+ L P + +L GL
Sbjct: 297 MDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGL 335
>gi|15219527|ref|NP_177512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169780|sp|Q9C9U0.1|PP118_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g73710
gi|12324197|gb|AAG52063.1|AC012679_1 hypothetical protein; 49134-52109 [Arabidopsis thaliana]
gi|332197379|gb|AEE35500.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 991
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%)
Query: 347 LLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMN 406
L+ +Y AGR +A EM G D ++ ++ C + S LL ++E
Sbjct: 311 LIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKG 370
Query: 407 SLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
KT + LL + G I A E K+ +GL+P+ + AVL L +R
Sbjct: 371 ISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQR 423
>gi|357445509|ref|XP_003593032.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482080|gb|AES63283.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 36/215 (16%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
+GK+ +KL ++ GL P++ +Y + VK + + KAL
Sbjct: 151 KGKFDTTMKLFRQMKHDGLVPDLVTYSTLIAGCVKVKDGYPKALE--------------- 195
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
LI++ Q + L R+ V++ +LA+ G+ EAE +
Sbjct: 196 -----LIQELQDNKL----RMDD------------VIYGAILAVCASNGKWEEAEYYFNQ 234
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
MK G+ + Y +L ++ + + L+ +E K L+ LL+ Y++GG
Sbjct: 235 MKSEGRSPNVYHYSSLLNAYSACGDFTKADALIQDMESEGLAPNKVILTTLLKVYVRGGL 294
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQ 461
+ E L K+ LG + M ++ GL K Q
Sbjct: 295 FEKSRELLAKLESLGYAEDEMPYCVLMDGLAKARQ 329
>gi|302788332|ref|XP_002975935.1| hypothetical protein SELMODRAFT_51593 [Selaginella moellendorffii]
gi|300156211|gb|EFJ22840.1| hypothetical protein SELMODRAFT_51593 [Selaginella moellendorffii]
Length = 503
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 28/137 (20%)
Query: 347 LLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIE--- 403
++ Y GRG E+ M L G+ D + VL C + +G+A+ R +S E
Sbjct: 26 VIGAYAGNGRGDESLYLFRRMALEGERPDRHTFVRVLGACTNTAQGTAIHRHISSSELEF 85
Query: 404 -----------------------VMNSLCKKKTLSW--LLRGYIKGGHINDAAETLTKML 438
V S+ +K +SW ++ Y + GH +AA +M+
Sbjct: 86 DLMLQNSLVAMYGRHGRVDLARSVFQSIPEKSLVSWNAMITAYARNGHSREAAHAYNEMI 145
Query: 439 DLGLYPEYMDRVAVLQG 455
G+ P + + + G
Sbjct: 146 STGIEPNQISTLTTVLG 162
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 4/136 (2%)
Query: 355 GRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
GR EA L M G D LY V+ Q + + LL+ + +M T
Sbjct: 189 GRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTF 248
Query: 415 SWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCK 474
++RG G + +AA + +M+ G P M +LQGL R++Q+ A L
Sbjct: 249 DDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL-CRVRQADEARAMLGRVP 307
Query: 475 RLSD---TSLIGPCLV 487
L+ ++IG CL
Sbjct: 308 ELNVVLFNTVIGGCLA 323
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 31/279 (11%)
Query: 178 LLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPT 237
LLVDM G+KP I+LY + + + A + K +LS GI P
Sbjct: 543 LLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV------------PN 590
Query: 238 GYLAWKMMVE-----GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGK---A 289
+ + ++++ G V+A+ + E GL P++ +Y +A++ L++ GK A
Sbjct: 591 NVI-YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAY----SAIIHSLSKNGKTKEA 645
Query: 290 LRKLKGYVRAGSIAELDGKNLGLIEKY-QSDLLADGSRLSSWAIQEGGSSLYGVVHERLL 348
+ +++ G + ++ N LI + + + S+L + G + VV+ L+
Sbjct: 646 MGVFLKFLKTGVVPDVFLYN-SLISGFCKEGDIEKASQLYDEMLHNGINPNI-VVYNTLI 703
Query: 349 AMY-IC-AGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMN 406
Y C +G EA + EM G DG +Y I++ C + L +
Sbjct: 704 NDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQ-QK 762
Query: 407 SLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPE 445
S+ + L+ + K G + +A E M+D L P
Sbjct: 763 SVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPN 801
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 4/136 (2%)
Query: 355 GRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
GR EA L M G D LY V+ Q + + LL+ + +M T
Sbjct: 173 GRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTF 232
Query: 415 SWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCK 474
++RG G + +AA + +M+ G P M +LQGL R++Q+ A L
Sbjct: 233 DDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL-CRVRQADEARAMLGRVP 291
Query: 475 RLSD---TSLIGPCLV 487
L+ ++IG CL
Sbjct: 292 ELNVVLFNTVIGGCLA 307
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 88/216 (40%), Gaps = 6/216 (2%)
Query: 252 DAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLG 311
DA+++ H+R GL P+ ++ LTA+ + A R RAG A N
Sbjct: 126 DAVRVFDHMRARGLAPDAHACTALLTALARA-RMTATARRVFDEMARAGLAATTHVYNAM 184
Query: 312 LIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVG 371
L ++ A + + + G +L + ++A+Y G G EA M G
Sbjct: 185 LHVCLKAGDAAQAEAIVTR-MDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEG 243
Query: 372 KEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAA 431
D ++ + + ++L + + + T + L+ GY + G++ +A
Sbjct: 244 IRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAV 303
Query: 432 ETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVE 467
+ +M G+ P VA + +++ + GN++
Sbjct: 304 KLRGRMEAAGMLPG----VATYNAILRKLCEDGNMK 335
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 124/318 (38%), Gaps = 41/318 (12%)
Query: 174 DVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQ 233
+V L +M VG P +I+ Y + EK RA + ++E G +
Sbjct: 283 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEY----------FSEMKNNGLK 332
Query: 234 GGPTGY--LAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALR 291
Y L EG AIKL+ +R +GL P ++Y + A K N +A +
Sbjct: 333 PNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGN-LTEAWK 391
Query: 292 KLKGYVRAGS-------IAELDG--KNLGLIEKYQ--SDLLADGSRLSSWAIQEGGSSLY 340
L ++AG A LDG K +IE + +L DG I
Sbjct: 392 LLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG-------ISPNQQVYT 444
Query: 341 GVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLS 400
+VH YI A R +A + L +M + D LY ++ SQ + +L
Sbjct: 445 ALVHG-----YIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILE 499
Query: 401 RIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRI 460
++ + ++ Y K G +DA +M D+G+ + ++ GL
Sbjct: 500 EMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGL---- 555
Query: 461 QQSGNVEAYLN-LCKRLS 477
++G VE ++ C+ LS
Sbjct: 556 CEAGIVELAVDYFCRMLS 573
>gi|224065166|ref|XP_002301697.1| predicted protein [Populus trichocarpa]
gi|222843423|gb|EEE80970.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 89/215 (41%), Gaps = 11/215 (5%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
EG+ DA++ +H+ ++ + P+ SY I L KE+N A V S+ D
Sbjct: 196 EGRTFDAVEF-LHVAKNRILPDADSYAILLEGWEKEMN-VASARTTFADMV---SMVGWD 250
Query: 307 GKNLGLIEKYQSDLLA--DGSR--LSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAER 362
+N+ + + S LL DG R + + + GV RL + A
Sbjct: 251 PRNVPAYDTFLSTLLMGYDGLREAMKHFDTMKDRGCFPGVKFFRLALEECLKCNDVRAAM 310
Query: 363 QLWEMKL--VGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRG 420
+WE + VG D LY++++ I N+ ++ L + +T + L +
Sbjct: 311 LIWETLVARVGFRPDIQLYNLMIGIHCYDNQTDIANKFLDEMIYNGVFPDSQTYNVLFQY 370
Query: 421 YIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQG 455
IK + +A+ L +M+ +P + A ++
Sbjct: 371 LIKYKKLKEASFVLNEMIKNEFFPNKTNCNAAIKA 405
>gi|225452238|ref|XP_002268821.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46610
[Vitis vinifera]
Length = 763
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 144/332 (43%), Gaps = 28/332 (8%)
Query: 138 EWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKV 197
+W + ++ N T+ + +M W+ ++E ++ LL DMD GL+PG + E++
Sbjct: 357 DWENEFVKLKNFTIRICYQVMRRWL---VKEGNQSPILLKLLADMDNAGLQPGRAEYERL 413
Query: 198 ISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVDAIKLV 257
+ W ++E V+ K + +R E E ++ W M K+ A+++
Sbjct: 414 V---WACTREEHYVV-AKELYTR---IRERHTEISL-SVCNHIIWLMGKAKKWWAALEIY 465
Query: 258 IHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGS--IAELDGKNLGLIEK 315
L + G KP SY + VV N A RK KG R G + +++ K L +
Sbjct: 466 EDLLDKGPKPNNLSYEL----VVSHFNILLTAARK-KGIWRWGVRLLNKMEDKGLKPGSR 520
Query: 316 YQSDLLADGSRL--SSWAIQ------EGGSSLYGVVHERLLAMYICAGRGLEAERQLWE- 366
+ +L S+ +S A++ E G + + LL+ + G+ + ++WE
Sbjct: 521 EWNAVLVACSKAAETSAAVEIFRRMVEQGEKPTIISYGALLSA-LEKGKLYDEASRVWEH 579
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
M +G E + Y I+ +IC Q + V +L +E + T + ++ G + G
Sbjct: 580 MVKMGVEPNLYAYTIMASICVGQGKLQRVDSILREMETLGIDATVVTYNAIISGCARNGL 639
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
+ A E +M + P + +++ L K
Sbjct: 640 SSAAFEWFHRMKVGKIQPNEITYEMLIEALAK 671
>gi|255553861|ref|XP_002517971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542953|gb|EEF44489.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1029
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 28/270 (10%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGY-VRAGSIAELD 306
G +A+ + H++ GL P+ + + + V+K+ EF +A K + + + +L+
Sbjct: 230 GLVTEALLWIKHMKLRGLFPDEVT-MNTVVKVLKDAGEFDRAHSFYKDWCIGKIELDDLE 288
Query: 307 GKNLGLIEK------------YQSDLLADGSRLSSWAIQEGGSSLYGVV--------HER 346
++G IE ++L G R+ + I G S +V +
Sbjct: 289 LNSMGDIEHGSGSGPVSFKHFLSTELFKIGGRIRTPKIV-GSSDAEKIVRKPRLTSTYNT 347
Query: 347 LLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMN 406
L+ +Y AGR +A +M G D ++ ++ C S S LL+++E
Sbjct: 348 LIDLYGKAGRLGDAADIFSDMMKSGVAMDTITFNTMIYTCGSHGHLSEAETLLNKMEDRG 407
Query: 407 SLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRI---QQS 463
+T + L Y G+I+ A + K+ ++GL P+ + A+L L +R +
Sbjct: 408 VSPDTRTYNIFLSLYADEGNIDAAIKCYKKIREVGLLPDTVSHRAILHELCERNMVKEAE 467
Query: 464 GNVEAYLNLCKRLSDTSLIGPCLVYLYIKK 493
+E K++ + SL P LV +YI K
Sbjct: 468 AIIEEIEKSSKQVDEHSL--PGLVKMYINK 495
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 95/221 (42%), Gaps = 10/221 (4%)
Query: 249 KYVDAIKLVI-HLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVR---AGSIAE 304
K+ D+I +I + E+G++P+ I AV+ +E G +K + + +GS
Sbjct: 121 KHFDSIHSIISQVEENGMEPDS----IFFNAVINAFSESGNMQEAMKYFWKMKESGSKPT 176
Query: 305 LDGKNLGLIEKYQ-SDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQ 363
N LI+ Y + + +L Q+ + L+ + ++A
Sbjct: 177 TSTFNT-LIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNV 235
Query: 364 LWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIK 423
+++M G + D Y+ + A E S ++ ++ N ++T ++ GY K
Sbjct: 236 VYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCK 295
Query: 424 GGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSG 464
G I +A + + +M DLGL P + ++++G + + G
Sbjct: 296 EGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDG 336
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 122/294 (41%), Gaps = 39/294 (13%)
Query: 194 IEKVISLYWEMEKKERAV--LFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYV 251
+++ + L+ E+ +K + +KA+ + G + P + + +MV G
Sbjct: 238 LDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCT 297
Query: 252 -----DAIKLVIHLRESGLK--PEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAE 304
AIKL+ + GL+ P Y+ +IAL + + A+R ++ V G +
Sbjct: 298 LSELETAIKLLSEMAARGLELNPVAYTSVIALLC---DEGQVSDAVRVVEDMVMHGVV-- 352
Query: 305 LDGKNLGLIEK---YQSDLLADGSRLSSW--AIQEGGSSLYGVVHERLLAMYICAGRGLE 359
LD + + DL A +W +Q+ G + GV + L+ AG E
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAA----ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKE 408
Query: 360 AERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKK------T 413
AER L EM+ G + D Y +++ + V ++ V N + +K+ T
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLI------DGYCKVGKMTEAFLVHNKMVQKRVTPNVVT 462
Query: 414 LSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVE 467
+ L G K G + A E L +M GL +++ GL K +GN+E
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCK----AGNLE 512
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 98/243 (40%), Gaps = 37/243 (15%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKE------------------------L 283
G+ DA+++ +RE G+ P + + A KE
Sbjct: 328 GRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAY 387
Query: 284 NEFGKALRKLKGYVRAGSIAELDGKNLGL-IEKYQSDLLADG---------SRLSSWAIQ 333
N L +++ A I E + +N GL +K L DG + +
Sbjct: 388 NALANGLCRVRDLKAANDIVE-EMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMS 446
Query: 334 EGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL-AICASQNEG 392
+ G +L V + L++ +GR +++ER L EM G E D Y +V+ A C + +
Sbjct: 447 DEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVK 506
Query: 393 SAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAV 452
+ +LL ++ T + ++ G+ G + +A L ML++G+ P+ + +
Sbjct: 507 TGF-KLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNIL 565
Query: 453 LQG 455
L G
Sbjct: 566 LDG 568
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 122/294 (41%), Gaps = 39/294 (13%)
Query: 194 IEKVISLYWEMEKKERAV--LFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYV 251
+++ + L+ E+ +K + +KA+ + G + P + + +MV G
Sbjct: 238 LDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCT 297
Query: 252 -----DAIKLVIHLRESGLK--PEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAE 304
AIKL+ + GL+ P Y+ +IAL + + A+R ++ V G +
Sbjct: 298 LSELETAIKLLSEMAARGLELNPVAYTSVIALLC---DEGQVSDAVRVVEDMVMHGVV-- 352
Query: 305 LDGKNLGLIEK---YQSDLLADGSRLSSW--AIQEGGSSLYGVVHERLLAMYICAGRGLE 359
LD + + DL A +W +Q+ G + GV + L+ AG E
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAA----ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKE 408
Query: 360 AERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKK------T 413
AER L EM+ G + D Y +++ + V ++ V N + +K+ T
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLI------DGYCKVGKMTEAFLVHNKMVQKRVTPNVVT 462
Query: 414 LSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVE 467
+ L G K G + A E L +M GL +++ GL K +GN+E
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCK----AGNLE 512
>gi|356562139|ref|XP_003549331.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 689
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 355 GRGLEAERQLW---EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIE-VMNSLCK 410
GRG +E L+ EMK G E + LY+ +LA+CA ++ ++ LC
Sbjct: 352 GRGRYSEDALFVYKEMKEKGMEMNTHLYNTLLAMCADLGLADDAFKIFEDMKSSATCLCD 411
Query: 411 KKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQ 454
T S L+ Y G++++A L +M++ G P +++Q
Sbjct: 412 SWTFSSLITIYSCSGNVSEAERMLNEMIESGFQPTIFVLTSLVQ 455
>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
Length = 635
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 95/221 (42%), Gaps = 10/221 (4%)
Query: 249 KYVDAIKLVI-HLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVR---AGSIAE 304
K+ D+I +I + E+G++P+ I AV+ +E G +K + + +GS
Sbjct: 121 KHFDSIHSIISQVEENGMEPDS----IFFNAVINAFSESGNMQEAMKYFWKMKESGSKPT 176
Query: 305 LDGKNLGLIEKYQ-SDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQ 363
N LI+ Y + + +L Q+ + L+ + ++A
Sbjct: 177 TSTFNT-LIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNVLVRAWCNKXNIMKAWNV 235
Query: 364 LWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIK 423
+++M G + D Y+ + A E S ++ ++ N ++T ++ GY K
Sbjct: 236 VYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCK 295
Query: 424 GGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSG 464
G I +A + + +M DLGL P + ++++G + + G
Sbjct: 296 EGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDG 336
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 103/272 (37%), Gaps = 42/272 (15%)
Query: 221 GIAYAEGDGEGQQGGPTGY--LAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTA 278
G Y GEG + Y L + GK A KL++ + + G P+ SY + A
Sbjct: 165 GAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAA 224
Query: 279 V-----VKELNEFGKALRK----------LKGYVRAGSIAELDGKNLGLIEKYQSDLLAD 323
+ V+E E + + G R G + E+ G ++ +
Sbjct: 225 MCEDGRVEEAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVS 284
Query: 324 GSRLSSWAIQEGGSSLYGVV---------------HERLLAMYICAGRGLEAERQLWE-M 367
S + SW G L V L+ Y GR E LW M
Sbjct: 285 YSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGV-GLWRVM 343
Query: 368 KLVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNSLCKKK--TLSWLLRGYIKG 424
L G + +Y+ +L +C S N AV + R+E + C+ T S L+ G++K
Sbjct: 344 VLEGVRPNVVVYNTLLNGLCCSGNLAEAVD-VCGRME-KDCFCRPNVTTYSTLVHGFVKA 401
Query: 425 GHINDAAETLTKMLDLGLYPE---YMDRVAVL 453
G + A+E KM++ G+ P Y V VL
Sbjct: 402 GDLQGASEVWNKMVNCGVRPNVVVYTSMVDVL 433
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 99/252 (39%), Gaps = 64/252 (25%)
Query: 240 LAWKMMVEGKYVD-----AIKLVIHLRESGLKPEVYSYLIALTAVVKE--LNEFGKALRK 292
+ + +++E D A+KL+ +R+ G KP+V +Y + + + KE L+E K L
Sbjct: 245 ITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNN 304
Query: 293 LKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYI 352
+ Y G + H +L
Sbjct: 305 MPLY---------------------------------------GCQPNVITHNIILRSMC 325
Query: 353 CAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSR-IEVMNSL--- 408
GR ++AER L +M G ++I++ + RLL R I+V+ +
Sbjct: 326 STGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRK-------RLLGRAIDVLEKMPKH 378
Query: 409 -CKKKTLSW--LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGN 465
C +LS+ LL G+ + ++ A E L M+ G YP+ + +L L K G
Sbjct: 379 GCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCK----DGK 434
Query: 466 VEAYLNLCKRLS 477
+A + + +LS
Sbjct: 435 ADAAVEILNQLS 446
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 30/239 (12%)
Query: 252 DAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLG 311
+A++ + + + G+ P+V +Y L L + +A R K E+ G+N+
Sbjct: 254 EAVEFLSEMVDRGIPPDVVTYNTILHGFC-SLGQLNEATRLFK---------EMVGRNV- 302
Query: 312 LIEKYQSDLLADG---------SRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAER 362
+ + ++L DG +R S + E G+ + L+ Y + EA +
Sbjct: 303 MPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIK 362
Query: 363 QLWEMKLVGKEADGDL--YDIVL-AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLR 419
L M +GK +L Y+I++ C S+ A RLLS + N T S L++
Sbjct: 363 VLGIM--IGKGCAPNLSSYNILINGYCKSKRMNEA-KRLLSEMSEKNLTPDTVTYSTLMQ 419
Query: 420 GYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSD 478
G + G +A +M GL P+ M +L G K G+++ L L K + +
Sbjct: 420 GLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKH----GHLDEALKLLKEMHE 474
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 122/294 (41%), Gaps = 39/294 (13%)
Query: 194 IEKVISLYWEMEKKERAV--LFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYV 251
+++ + L+ E+ +K + +KA+ + G + P + + +MV G
Sbjct: 238 LDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCT 297
Query: 252 -----DAIKLVIHLRESGLK--PEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAE 304
AIKL+ + GL+ P Y+ +IAL + + A+R ++ V G +
Sbjct: 298 LSELETAIKLLSEMAARGLELNPVAYTSVIALLC---DEGQVSDAVRVVEDMVMHGVV-- 352
Query: 305 LDGKNLGLIEK---YQSDLLADGSRLSSW--AIQEGGSSLYGVVHERLLAMYICAGRGLE 359
LD + + DL A +W +Q+ G + GV + L+ AG E
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAA----ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKE 408
Query: 360 AERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKK------T 413
AER L EM+ G + D Y +++ + V ++ V N + +K+ T
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLI------DGYCKVGKMTEAFLVHNKMVQKRVTPNVVT 462
Query: 414 LSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVE 467
+ L G K G + A E L +M GL +++ GL K +GN+E
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCK----AGNLE 512
>gi|255576798|ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531275|gb|EEF33118.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 35/80 (43%)
Query: 366 EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGG 425
E+K G + D +Y +LA+CAS N S+++ L S LL Y G
Sbjct: 242 ELKYNGLQMDTVIYGTILAVCASHNRCEEAESYFSQMKNEGHLPNVFHYSSLLNAYASSG 301
Query: 426 HINDAAETLTKMLDLGLYPE 445
+ A E + M LGL P
Sbjct: 302 NYKKAEELVQDMKSLGLVPN 321
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%)
Query: 359 EAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLL 418
EA + L E+ + D Y+ +LA +E ++ +RL+SR+ N L K + + LL
Sbjct: 336 EAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLL 395
Query: 419 RGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
+ I+ G + A E M + G YP ++ GL K+
Sbjct: 396 KLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKK 436
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 12/223 (5%)
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGL 312
AI LV + GLKP + ++ L + K F KA + + ++ N+ L
Sbjct: 211 AIALVDSMANKGLKPGIVTFNSVLKGLCKH-RRFDKAKEVFRAMDQCSVAPDVRSFNI-L 268
Query: 313 IEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGK 372
I + + + +Q+ G + V L+ ++ G+ A L EMK +G
Sbjct: 269 IGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGL 328
Query: 373 EADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLRGYIKGGHIND 429
DG +Y +V+ C + GS L R E++ C +++ LL G K + D
Sbjct: 329 VPDGVIYTMVIGGFCRA---GSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLD 385
Query: 430 AAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNL 472
A E L +M + G+ P+ ++ G + GN E L L
Sbjct: 386 AEELLNEMKERGVTPDLCTFTTLIHGYCR----DGNFEKALQL 424
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 95/221 (42%), Gaps = 10/221 (4%)
Query: 249 KYVDAIKLVI-HLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVR---AGSIAE 304
K+ D+I +I + E+G++P+ I AV+ +E G +K + + +GS
Sbjct: 121 KHFDSIHSIISQVEENGMEPDS----IFFNAVINAFSESGNMQEAMKYFWKMKESGSKPT 176
Query: 305 LDGKNLGLIEKYQ-SDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQ 363
N LI+ Y + + +L Q+ + L+ + ++A
Sbjct: 177 TSTFNT-LIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNV 235
Query: 364 LWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIK 423
+++M G + D Y+ + A E S ++ ++ N ++T ++ GY K
Sbjct: 236 VYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCK 295
Query: 424 GGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSG 464
G I +A + + +M DLGL P + ++++G + + G
Sbjct: 296 EGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDG 336
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%)
Query: 336 GSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAV 395
G +L V + LL++Y GR EA L EM VG + D Y+ +L Q + V
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 396 SRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQG 455
++ + ++ + L T S L+ GY KGG +A E + GL + + A++
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Query: 456 LRK 458
L K
Sbjct: 559 LCK 561
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 13/216 (6%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
+GK + + L+ +++ GL+P+ Y Y + + KE A+ L + G + ++
Sbjct: 276 DGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKE-GRVDLAIEVLDVMISDGCVPDIV 334
Query: 307 GKNLGLI----EKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAER 362
N L +K + L+ +L SS Y V L + +G + A
Sbjct: 335 NYNTILACLCKQKRADEALSIFEKLGEVGCSPNASS-YNTVFSALGS----SGHKVRALG 389
Query: 363 QLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLRG 420
+ EM L + D Y+ +++ LL +E+ +S CK +S+ +L G
Sbjct: 390 MILEM-LDXVDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLG 448
Query: 421 YIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
+ G ++DA E L M+D G P +++G+
Sbjct: 449 LCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGI 484
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 52/122 (42%)
Query: 332 IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNE 391
++E G VV LL+ Y AG+ +A L EM G E + + Y I++ SQ +
Sbjct: 271 MREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEK 330
Query: 392 GSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVA 451
R+ +E T + L+ G+ K G IN + L M G P + +
Sbjct: 331 MDEAMRVFVEMERTGCEADVVTYTALISGFCKWGKINRGYQILDAMKQKGHMPNQLTYLR 390
Query: 452 VL 453
+L
Sbjct: 391 IL 392
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 133/331 (40%), Gaps = 27/331 (8%)
Query: 133 ALEVFEWLKKENRVDNE-TMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGF 191
A EVF+ + K+ N T +++ +C+ E +G+ +D+L +M G++P
Sbjct: 251 AFEVFDRMVKDGCNPNSVTYSTLINGLCN--------EGRIGEAMDMLEEMTEKGIEPTV 302
Query: 192 SMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYV 251
IS ++ + + A+ V+++ +G + + G + GK
Sbjct: 303 YTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISG--------LFRAGKME 354
Query: 252 DAIKLVIHLRESGLKPEVYSYLIALTAVVKEL---NEFGKALRKLKGYVRAGSIAELDGK 308
AI + + + GL P +Y A++ EL FG AL+ G++A
Sbjct: 355 LAIGMYHKMLKEGLVPNTVTY----NALINELCTEGRFGIALKIFDWMEGHGTLANAQTY 410
Query: 309 NLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMK 368
N + + D + + + +++G S V + L+ + G A R L+ MK
Sbjct: 411 NQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTV-VTYNTLIVENLKRGYLNNATRFLYMMK 469
Query: 369 LVGKEADGDLY-DIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHI 427
E D Y +++ C SA S ++ S + T + ++ GY K G I
Sbjct: 470 ESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISP-NQWTYTAMIDGYCKEGKI 528
Query: 428 NDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
+ A +M + G A++ GL K
Sbjct: 529 DVALSLFERMEENGCSASIETYNAIISGLSK 559
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%)
Query: 355 GRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
G+ ++AER L EM G + D Y +V+ + + +LL ++ + T
Sbjct: 456 GKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITY 515
Query: 415 SWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQG 455
+ L+ G K G + +A L ML+LG+ P+ + +LQG
Sbjct: 516 NVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQG 556
>gi|448527964|ref|XP_003869625.1| Dia2 protein [Candida orthopsilosis Co 90-125]
gi|380353978|emb|CCG23492.1| Dia2 protein [Candida orthopsilosis]
Length = 684
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 39/159 (24%)
Query: 265 LKPEVYSYLIALTAVVKELNEFGKALR-----------KLKGYVRAGSIAELDGKNLGLI 313
+ P++ +YL A +++L +FG ALR KGY+R G + + G
Sbjct: 65 IHPKLTTYLDQRAATLEKLEKFGLALRDSTKSIELDPTDYKGYLRIGKLQTIQGNKFEAY 124
Query: 314 EKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKE 373
+ YQ + S +++G ++ ++E+L + Y + L+AER++ E
Sbjct: 125 KMYQKGIYVIDS-----LVKKGLHTINAQLYEKLKSQYRMLNQELKAERKIPE------- 172
Query: 374 ADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKK 412
++G +VSR S+I+ +SL K+K
Sbjct: 173 ----------------SQGLSVSRSGSQIKSQSSLKKRK 195
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 20/294 (6%)
Query: 168 EERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEG 227
+E + + V L M+ L P +I +E + A V+ + +RG+
Sbjct: 328 DEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGV----- 382
Query: 228 DGEGQQGGPTGYLAWK-MMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEF 286
++ G T + K EGK +A +++ + ESG P+ ++Y + K +
Sbjct: 383 ----KENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKA-GKM 437
Query: 287 GKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHER 346
+A + + R G + N L L D L+ A ++ G L V +
Sbjct: 438 AEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKA-RKRGYILDEVTYGT 496
Query: 347 LLAMYICAGRGLEAER--QLW-EMKLVGKEADGDLYD-IVLAICASQNEGSAVSRLLSRI 402
L+ Y + +A+R +LW EMK G A Y+ I+ +C S AV +L +
Sbjct: 497 LIMGYF---KDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELL 553
Query: 403 EVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
E + + T + ++ GY G + A + KM++ L P+ +L+GL
Sbjct: 554 E-KGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGL 606
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 11/151 (7%)
Query: 139 WLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVI 198
W+ K +D T +++S C +ER + D DL+ +M+ L+P ++
Sbjct: 622 WISKGKPMDTVTYNIIISSFC--------KERRLEDAFDLMTEMEGKNLEPDRYTYNAIV 673
Query: 199 SLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWK---MMVEGKYVDAIK 255
+ + + E A +G D + G + + + +GKY DA+K
Sbjct: 674 TGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMK 733
Query: 256 LVIHLRESGLKPEVYSYLIALTAVVKELNEF 286
L + G+ Y+Y+ + ++K F
Sbjct: 734 LFQQAEQKGVSLNKYTYIKLMDGLLKRRKSF 764
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%)
Query: 330 WAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQ 389
+ + + G L V L+ GR +EA+R + M VG D Y+ ++
Sbjct: 436 FEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLT 495
Query: 390 NEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDR 449
++LL I + K T + LL GY K I+DA +ML GL P+ +
Sbjct: 496 GRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTY 555
Query: 450 VAVLQGLRKRIQQSGNVEAYLNL 472
+L GL + + S E YL++
Sbjct: 556 NTILHGLFQTGRFSEAKELYLSM 578
>gi|302770262|ref|XP_002968550.1| hypothetical protein SELMODRAFT_89343 [Selaginella moellendorffii]
gi|300164194|gb|EFJ30804.1| hypothetical protein SELMODRAFT_89343 [Selaginella moellendorffii]
Length = 522
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 28/135 (20%)
Query: 347 LLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLS------ 400
++ Y GRG E+ M L G+ D + VL C + +G+A+ R +S
Sbjct: 74 VIGAYAGNGRGEESLYLFRRMALEGERPDRHTFVRVLGACTNTAQGTAIHRHISSSGLEF 133
Query: 401 ----------------RIE----VMNSLCKKKTLSW--LLRGYIKGGHINDAAETLTKML 438
R++ V S+ +K +SW +L Y + GH +AA +M+
Sbjct: 134 DLMLQNSLVALYGRYGRVDLARSVFQSIPEKSLVSWNAMLTAYARNGHSREAAHAYNEMI 193
Query: 439 DLGLYPEYMDRVAVL 453
G+ P + +VL
Sbjct: 194 FTGIEPNEISFSSVL 208
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 86/225 (38%), Gaps = 33/225 (14%)
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTA------------VVKELNEFGKALRK------LK 294
A+ + ++ +GL P+ + + +TA + +EL E G R LK
Sbjct: 346 AMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLK 405
Query: 295 GYVRAGS-------IAELDGKNLGLIEKYQS---DLLADGSRLSSWAI-----QEGGSSL 339
GYV+ GS ++E++ E S D A+ R S I + G
Sbjct: 406 GYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRP 465
Query: 340 YGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLL 399
V R+LA Y G+ ++ + L EM+ G D Y++++ N
Sbjct: 466 NSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATF 525
Query: 400 SRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYP 444
R+ + T + L+ + K GH N A E M + G P
Sbjct: 526 DRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSP 570
>gi|255661022|gb|ACU25680.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 376
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 102/257 (39%), Gaps = 23/257 (8%)
Query: 232 QQGGPTGYLAWKMMVEG-----KYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEF 286
++GG A+ M+ G K A+ ++ + +SG KP+ + Y + +V ++F
Sbjct: 122 RKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPKAHVYNALINGLVGA-SKF 180
Query: 287 GKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHER 346
A R + N + + + + L +++G +S V+
Sbjct: 181 EDAFRVFHEMGTTHCSPTIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWNS--SVITYS 238
Query: 347 LLAMYICAGRGLEAERQLW-EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVM 405
LL +C G +E QLW ++ G + D +++I++ S + L I
Sbjct: 239 LLIKGLCLGHKVEMALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDINHW 298
Query: 406 NSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGN 465
N T + L+ G+ K G I +A ++L GL P+ + L+GL
Sbjct: 299 NCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIISYNITLKGLCS------- 351
Query: 466 VEAYLNLCKRLSDTSLI 482
C R+SD+ L
Sbjct: 352 -------CNRISDSILF 361
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 11/218 (5%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
GKY AI++ ++E+GL P + +Y + L V ++ + +L +R+ + +
Sbjct: 251 GKYKRAIEIFEKMKETGLDPTLVTYNVMLD-VYGKMGRAWSMILELLDEMRSKGLEFDEF 309
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEM 367
+I + + D +R ++ G + +L ++ AG EA L EM
Sbjct: 310 TCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEM 369
Query: 368 KLVGKEADGDLYDIVLAI---CASQNEGSAVSRLLSRIEVM-NSLCKKKTLSWLLRGYIK 423
+ E D Y+ ++A +EG+AV ++ VM N++ T + ++ Y K
Sbjct: 370 EDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAI----TYTTVINAYGK 425
Query: 424 GGHINDAAETLTKMLDLGLYPEYM--DRVAVLQGLRKR 459
G + A E +M +LG P + V VL G R R
Sbjct: 426 AGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSR 463
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 86/225 (38%), Gaps = 33/225 (14%)
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTA------------VVKELNEFGKALRK------LK 294
A+ + ++ +GL P+ + + +TA + +EL E G R LK
Sbjct: 275 AMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLK 334
Query: 295 GYVRAGS-------IAELDGKNLGLIEKYQS---DLLADGSRLSSWAI-----QEGGSSL 339
GYV+ GS ++E++ E S D A+ R S I + G
Sbjct: 335 GYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRP 394
Query: 340 YGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLL 399
V R+LA Y G+ ++ + L EM+ G D Y++++ N
Sbjct: 395 NSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATF 454
Query: 400 SRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYP 444
R+ + T + L+ + K GH N A E M + G P
Sbjct: 455 DRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSP 499
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 68/171 (39%), Gaps = 42/171 (24%)
Query: 342 VVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSR 401
V + ++ Y AG+ +A +L M+ G EAD Y ++ C + ++ S+ L
Sbjct: 258 VTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQE 317
Query: 402 IE-------------VMNSLCKKKTL----------------------SWLLRGYIKGGH 426
++ V+ LCK+ L + L+ GY K G
Sbjct: 318 MDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGS 377
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEA---YLNLCK 474
+ DA L +M+D G P+ + V+ GL K +G VE Y C+
Sbjct: 378 VEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCK----NGRVEEAMDYFQTCR 424
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 81/189 (42%), Gaps = 2/189 (1%)
Query: 256 LVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEK 315
L +R+ ++P Y Y +T + ++ ++ K ++ L+ +AG + N+ +I
Sbjct: 374 LYQEMRDCDIRPNTYMYARMIT-IYRDTGQWQKGVKLLREMQQAGVTPDAHVYNV-IINT 431
Query: 316 YQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEAD 375
+ + +R++ + +Q+GG V L+ AG+ LEA + ++M G
Sbjct: 432 FGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPT 491
Query: 376 GDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLT 435
++IV+ + V+ ++ + T + L+ Y + DA E L
Sbjct: 492 AQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVECLQ 551
Query: 436 KMLDLGLYP 444
M + G+ P
Sbjct: 552 TMKEDGMGP 560
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 32/224 (14%)
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGL 312
A++++ + + GL+P+ Y + L A+ K GS+ E +
Sbjct: 186 AVEVLDEMPKYGLEPDEYVFGCLLDALCKN-----------------GSVKEASKVFEDM 228
Query: 313 IEKYQSDLLADGSRLSSWA--------------IQEGGSSLYGVVHERLLAMYICAGRGL 358
EK+ +L S L W ++E G VV LL+ Y AG+
Sbjct: 229 REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 359 EAERQLWEMKLVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWL 417
+A + +M+ G E + + Y +++ A+C ++ R+ +E T + L
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 418 LRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQ 461
+ G+ K G I+ L M G+ P + + ++ K+ Q
Sbjct: 349 ISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQ 392
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 88/224 (39%), Gaps = 29/224 (12%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
GK DA L+ +R+ G +P V Y + + A+ + +A+R R G A+
Sbjct: 285 GKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD--- 341
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLY------GVVHERLLAMYICAGRGLEAE 361
I Y + + S W + + G S+ GV+ ++ M I E +
Sbjct: 342 -----IVTYTALI----SGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAH--EKK 390
Query: 362 RQLWE-------MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
Q E MK G D +Y++V+ + E RL + +E T
Sbjct: 391 EQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTF 450
Query: 415 SWLLRGYIKGGHINDAAETLTKMLDLGLY--PEYMDRVAVLQGL 456
++ G+ G + +A +M+ G++ P+Y ++L L
Sbjct: 451 VIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNL 494
>gi|357440753|ref|XP_003590654.1| WD repeat-containing protein [Medicago truncatula]
gi|355479702|gb|AES60905.1| WD repeat-containing protein [Medicago truncatula]
Length = 562
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 11/172 (6%)
Query: 270 YSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSS 329
Y+ + L V+ LN K L +R L+ Y + L + +
Sbjct: 108 YAVQLDLITKVRGLNSAEKFFEDLPDKMRGQPTCT------ALLHAYVQNNLTNKAEALM 161
Query: 330 WAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQ 389
+ E G V + R++++YI G+ LE +L+E V D ++++L CAS+
Sbjct: 162 SKMSECGFLRSPVPYNRMMSLYISNGK-LEKVPKLFEELKVNTSPDVVTFNLLLTACASE 220
Query: 390 NEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHIND----AAETLTKM 437
N+ R+L +++ T S L YI+ ++D AA TL +M
Sbjct: 221 NDVETAERVLLQLKKAKVDPDWVTYSTLTNLYIRNASVDDCLEKAASTLKEM 272
>gi|449446895|ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Cucumis sativus]
Length = 668
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 83/212 (39%), Gaps = 36/212 (16%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
GK+ ++KL ++ GL P+ +Y LT ++ + + KA+ LK
Sbjct: 185 NGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIRVKHGYAKAMELLK------------ 232
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
+Q+ G + V + L+A+ R +AER +
Sbjct: 233 ------------------------ELQDNGLCMDCVSYGTLIAICASHNRLEDAERFFNQ 268
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
M+ G + Y +L + + L+ +++ + K L+ LL+ Y++GG
Sbjct: 269 MRAEGHSPNMFHYGSLLNAYSINGDYKKADELIEDMKLTGLVPNKVILTTLLKVYVRGGL 328
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
+ + L+++ LG M ++ GL K
Sbjct: 329 FEKSRKLLSELESLGYGENEMPYCLLMDGLAK 360
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 144/372 (38%), Gaps = 56/372 (15%)
Query: 133 ALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFS 192
ALE+F+ +K++ V + S + +++ +R GD ++L MD G KP
Sbjct: 433 ALEMFDEMKQKGIVPEQYS------YNSLISGFLKADR-FGDALELFKYMDIHGPKPNGY 485
Query: 193 MIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVD 252
I+ Y + + +A+ + + S+GI G + + + G+
Sbjct: 486 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNA--------VLFGLAKSGRLGM 537
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGL 312
A ++ L+ G+ P+ +Y + + K ++F +A++ + +
Sbjct: 538 AKRVFHELKAMGVSPDTITYTMMIKCCSKA-SKFDEAVKIFYDMIENNCVP--------- 587
Query: 313 IEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGK 372
D+L VV+ + +Y AGRG EA + +++K +
Sbjct: 588 ------DVL--------------------VVNSLIDTLYK-AGRGDEAWQIFYQLKEMNL 620
Query: 373 EADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAE 432
E Y+ +LA + + V LL + N T + +L K G +NDA +
Sbjct: 621 EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALD 680
Query: 433 TLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRL----SDTSLIGPCLVY 488
L M G P+ V+ GL K + + + + K L + I P V
Sbjct: 681 MLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVK 740
Query: 489 LYIKKYKLWIIK 500
+ + K L IIK
Sbjct: 741 IGLMKEALHIIK 752
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 120/301 (39%), Gaps = 33/301 (10%)
Query: 170 RGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDG 229
R V D + L+ DM C G P +I ++ + + A + ++ +G
Sbjct: 197 RRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKG-------- 248
Query: 230 EGQQGGPTGYLAWKMMVEG-----KYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELN 284
G + + M++ G + ++I L+ G+KP+V +Y + + + N
Sbjct: 249 -----GTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS-N 302
Query: 285 EFGKALRKLKGYVRA-GSIAELDGKNLGLIEKYQSDLLADGSRLSS----WAIQEGGSSL 339
+A R L YV++ G ++ ++ D L ++ + + G
Sbjct: 303 RLDEACRLLL-YVKSRGCPPDV------ILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCD 355
Query: 340 YGVVHERLLAMYIC-AGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRL 398
VV L +C AGR EA L M +G Y+ ++ N L
Sbjct: 356 ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIEL 415
Query: 399 LSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAA-ETLTKMLDLGLYPEYMDRVAVLQGLR 457
+ +E N T + L+ G + ++ AA + +M+D G+ P+++ +L+GL+
Sbjct: 416 VEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLK 475
Query: 458 K 458
K
Sbjct: 476 K 476
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 102/242 (42%), Gaps = 22/242 (9%)
Query: 241 AWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAG 300
A K M++ +A+ + + + GL P+V +Y I + A+ K L A+ K + G
Sbjct: 455 AKKAMID----EAMHIFSRMSQHGLSPDVVTYGILIDALCK-LGRVDDAVLKFNQMINDG 509
Query: 301 SIAELDGKN-----LGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAG 355
N L +++++ A+ W + G V ++ G
Sbjct: 510 VTPNSVVFNSLVYGLCTVDRWEK---AEELFFEMW---DQGVRPNVVFFNTIMCNLCNEG 563
Query: 356 RGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL- 414
+ + A+R + M+ VG + Y+ ++ ++LL +VM S+ K L
Sbjct: 564 QVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLL---DVMVSVGLKPDLI 620
Query: 415 --SWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNL 472
LLRGY K G I++A +ML G+ P + +LQGL + S E YLN+
Sbjct: 621 SYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNM 680
Query: 473 CK 474
K
Sbjct: 681 IK 682
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 117/292 (40%), Gaps = 24/292 (8%)
Query: 176 VDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGG 235
+++L +MD G+ P +IS + + + A K +L RG
Sbjct: 207 LEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCV------------ 254
Query: 236 PTGYLAWKMMVE----GKYVDAIKLVI-HLR--ESGLKPEVYSYLIALTAVVKELNEFGK 288
P L + +M++ +D + V+ H++ ++G EVY++ + A+ + +F
Sbjct: 255 PDS-LTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRS-GKFPL 312
Query: 289 ALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLL 348
A L G + +GS+ L N + +S + D +LS + G + L+
Sbjct: 313 AKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLI 372
Query: 349 AMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSL 408
+ + AGR +A + L EMK D+ I GS L E+
Sbjct: 373 SGFCKAGRLSQAHQLLIEMK-AKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVG 431
Query: 409 CKKKTLSW--LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
CK +++ L+ GY K G +A +M G +P+ + VL K
Sbjct: 432 CKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSK 483
>gi|302825931|ref|XP_002994532.1| hypothetical protein SELMODRAFT_43839 [Selaginella moellendorffii]
gi|300137477|gb|EFJ04403.1| hypothetical protein SELMODRAFT_43839 [Selaginella moellendorffii]
Length = 402
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 28/137 (20%)
Query: 347 LLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLS------ 400
++ Y GRG E+ M L G+ D + VL C + +G+A+ R +S
Sbjct: 59 VIGAYAGNGRGEESLYLFRRMALEGERPDRHTFVRVLGACTNTAQGTAIHRHISSSGLEF 118
Query: 401 ----------------RIE----VMNSLCKKKTLSW--LLRGYIKGGHINDAAETLTKML 438
R++ V S+ +K +SW +L Y + GH +AA +M+
Sbjct: 119 DLMLQNSLVALYGRYGRVDLARSVFQSIPEKSLVSWNAMLTAYARNGHSREAAHAYNEMI 178
Query: 439 DLGLYPEYMDRVAVLQG 455
G+ P + + + G
Sbjct: 179 FTGIEPNEISTLTTVLG 195
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 19/121 (15%)
Query: 173 GDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQ 232
D ++ L +M VGLKP +M +I+ Y + E+AV + + S G+
Sbjct: 568 NDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK--------- 618
Query: 233 QGGPTGYLAWKMMVEG-----KYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFG 287
LA ++ + +A ++ +++E+G+KP+V +Y + A+++ +++F
Sbjct: 619 ----PSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR-VDKFQ 673
Query: 288 K 288
K
Sbjct: 674 K 674
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 32/151 (21%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGS------ 301
G+ ++A L LR+SG+KP +Y AL LKGYV+ G
Sbjct: 320 GRTLEAEALFEELRQSGIKPRTKAY---------------NAL--LKGYVKTGPLKDAEL 362
Query: 302 -IAELDGKNLG--------LIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYI 352
++E++ + + LI+ Y + + +R+ ++ G V RLLA Y
Sbjct: 363 MVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYR 422
Query: 353 CAGRGLEAERQLWEMKLVGKEADGDLYDIVL 383
G + + L EMK +G + D Y++V+
Sbjct: 423 DRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI 453
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 109/277 (39%), Gaps = 26/277 (9%)
Query: 185 VGLKPGFSMIEKVISLYWEMEKKERA-VLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWK 243
G +P +I+ Y +++K E A +F+K + S + A L
Sbjct: 188 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAV---------TFNTLIAG 238
Query: 244 MMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKAL---RKLKGYVRAG 300
G DAIKL + + G K + +Y + ++ K+ A+ KL+G
Sbjct: 239 FCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTP 298
Query: 301 SIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEA 360
+I + LI+ + S+ DG RL EG V+ L +C+ +E
Sbjct: 299 TIVTYNS----LIQGF-SERANDGLRLLCHMHAEGCKP--DVITYNCLISGLCSANRVED 351
Query: 361 ERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRG 420
++L+ + ++ +CA Q + +L R+ + T + ++
Sbjct: 352 AQRLFNGMACAPNVTTFNF-LIRGLCA-QKKVEEARNILDRMTAPD----MTTFNTIILA 405
Query: 421 YIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLR 457
+ K G ++DA E + ML G YP A+ G++
Sbjct: 406 FCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQ 442
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 94/240 (39%), Gaps = 46/240 (19%)
Query: 252 DAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLG 311
+AIK+ ++ +GL P + +Y + A K EF K + G + G
Sbjct: 243 EAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNG----------- 291
Query: 312 LIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGL-EAERQLWEMKLV 370
Q D + S L+ +C+ GL EA R+L+ +V
Sbjct: 292 ----VQPDRITFNSLLA-----------------------VCSRGGLWEAARRLFS-AMV 323
Query: 371 GKEADGDL--YDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHIN 428
K D D+ Y+ +L + ++S + N L T S ++ GY K G ++
Sbjct: 324 DKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLD 383
Query: 429 DAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGPCLVY 488
DA +M LG+ +DRV+ L + G E L++CK + + + + Y
Sbjct: 384 DALNMFNEMKFLGV---GLDRVS-YNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTY 439
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 16/220 (7%)
Query: 247 EGKYVDAIKLVIHLRESG--LKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAE 304
GK +A+KL L E G ++P+V ++ + + KE KA+ + GS
Sbjct: 233 NGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKE-GRLDKAVEIYDTMIERGSFGN 291
Query: 305 LDGKNLGLIEKYQSDLLADGSRLSSWAIQEG---GSSLYGVVHERLLAMYICAGRGLEAE 361
L ++ + E +S ++ L + G S+ Y V+ + M++ L
Sbjct: 292 LFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHM-----LNFA 346
Query: 362 RQLWE-MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LL 418
+ L+ MK+ G Y+ ++A ++ RL E+ S C+ T+S+ ++
Sbjct: 347 KGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQ--EMKESNCEPDTISFNIMI 404
Query: 419 RGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
G +K G I+ A E L M +GL P+ + + L K
Sbjct: 405 DGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSK 444
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%)
Query: 342 VVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSR 401
V + LL++Y GR EA L EM VG + D Y+ +L Q + V ++ +
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAE 504
Query: 402 IEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
++ + L T S L+ GY KGG +A E + GL + + A++ L K
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCK 561
>gi|359475966|ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Vitis vinifera]
Length = 563
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 33/228 (14%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGK---ALRKLKGYVRAGSIAE 304
G +A +++ +R +GLK V ++ T+++K L GK A R LK V G E
Sbjct: 286 GNVDEAKRMMTRMRLNGLKDNVATH----TSILKGLCVVGKLDDAARHLKEMVGLG--ME 339
Query: 305 LDGKNLGLI-EKYQSDLLADGS-----RLSSWAIQEGGSSLYGVVHERLLAMYICAGRGL 358
D K G++ +Y AD + + S I SS V R+L + +G+
Sbjct: 340 ADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVF--RIL---VESGKTD 394
Query: 359 EAERQLWEMKLVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNSLCKK------ 411
+A L +MK +G + Y V+ +C A R+ E ++ +C+
Sbjct: 395 KAGLILRQMKQLGCTPNFLSYSTVIDGLC------KAKGRMHEVEEFVDDMCRNGHHLDA 448
Query: 412 KTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
SWL++GY + G+ + A +MLD+G +A ++GL +
Sbjct: 449 SMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSAK 496
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 122/313 (38%), Gaps = 27/313 (8%)
Query: 181 DMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYL 240
D DC P +I+ + + E+ +A F+ E G + Y
Sbjct: 318 DADC---DPDVITYNALINCFCKFERMPKAFEFLH----------EMKANGLKPNVVTYS 364
Query: 241 AW--KMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVR 298
+ EG +AIK + +R L P ++Y + A K N +AL+ ++ ++
Sbjct: 365 TFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGN-LAEALKLVEEILQ 423
Query: 299 AG---SIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAG 355
AG ++ GL E+ + + R A+ G + + L+ +I A
Sbjct: 424 AGIKLNVVTYTALLDGLCEEGRMKEAEEVFR----AMLNAGVAPNQETYTALVHGFIKAK 479
Query: 356 RGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLS 415
A+ L EMK + D LY +L +++ L+ I+ +
Sbjct: 480 EMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYT 539
Query: 416 WLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKR 475
L+ Y K G +A L +MLDLGL + A++ GL K SG V+ ++ R
Sbjct: 540 TLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCK----SGLVQEAMHHFGR 595
Query: 476 LSDTSLIGPCLVY 488
+S+ L VY
Sbjct: 596 MSEIGLQPNVAVY 608
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 42/228 (18%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G+Y DA+ L +++ G P + +Y + L N +GK G + A
Sbjct: 207 GRYRDAVNLFNKMQQDGCNPTLITYNVVL-------NVYGKM-----GMPWSNVTA---- 250
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGL---EAERQL 364
L+E +S +A LY + L++ C RG EA
Sbjct: 251 ----LVEAMRSRGVA--------------PDLY--TYNTLIS---CCRRGSLYEEAVHLF 287
Query: 365 WEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKG 424
+MKL G D Y+ +L + ++L +E T + L+ Y KG
Sbjct: 288 QQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKG 347
Query: 425 GHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNL 472
G + +A + T+M+ G+ P+ +L G K + ++ +L +
Sbjct: 348 GLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEM 395
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 110/258 (42%), Gaps = 33/258 (12%)
Query: 174 DVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQ 233
+ V LL +M+ G++P I +++ + R ++A SRGI + +
Sbjct: 311 EAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGI---DLNTVAYN 367
Query: 234 GGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKL 293
G YL++ G Y A++L +RES +KP+ +Y I ++ K L ++ ++LR
Sbjct: 368 SGIKSYLSF-----GDYEKALELYTSMRESNVKPDAVTYNILISGSSK-LGKYTESLRFF 421
Query: 294 KGYV--RAGSIAELDGKNLGLIEKY--QSDLLADGSRLSSWAIQEGGSSLYGVVHERLLA 349
+ V + S E+ LI Y Q L S SS +++ G + + L+
Sbjct: 422 EDMVDSKVSSTKEVYS---SLIYSYIKQGKLSEAESTFSS--MKKSGCFPDVLTYTTLIQ 476
Query: 350 MYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQ----NEGSAVSRLLSRIEVM 405
Y G A EM++ G D IC+S N+G R+L +E M
Sbjct: 477 AYNAGGGWKRAWDLFKEMEVNGIPPDA-------IICSSLMEAFNKGGEPERVLQLMEFM 529
Query: 406 NSLCKKKTLSWLLRGYIK 423
KKK++ + Y +
Sbjct: 530 ----KKKSIPLNQKSYFE 543
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 163/438 (37%), Gaps = 101/438 (23%)
Query: 116 LQLVLVYFSQEGRDSWCALEVFEWLK----KENRVDNETMELMVSIMCSWVKKYIEEERG 171
+L++V GR LE WL + VDN T L++ C K Y+
Sbjct: 227 FKLMVVACCNMGR----VLEAERWLNAMVERGFIVDNATCTLIIDAFCQ--KGYVNR--- 277
Query: 172 VGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRG---IAYAEG- 227
VV M +GL P +I+ + ++A ++ ++ RG Y
Sbjct: 278 ---VVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTT 334
Query: 228 --DGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKE--L 283
DG ++G W E + +KLV R G KP V++Y + KE L
Sbjct: 335 LIDGLCKKG-------W---TEKAFRLFLKLV---RSDGYKPNVHTYTAMINGYCKEDKL 381
Query: 284 NEFGKALRKLK----------------------GYVRAGSIAELDGKNLGLIEKYQSDLL 321
N L +++ +VRA + +L GK Y + +
Sbjct: 382 NRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI 441
Query: 322 ADG--------------SRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW-- 365
DG +++S +Q G V + L++++ R + R L
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADG-----VTYTILMSVHC---RQADTNRSLVFF 493
Query: 366 -EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKG 424
+M VG D Y +++ Q + RL + + KKT + ++ GY +
Sbjct: 494 NKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRY 553
Query: 425 GHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSL--- 481
G+ + A + +M + G P+ + A++ GL K E+ L+ + L D +
Sbjct: 554 GNTSLAVKLFQRMSNHGCAPDSITYGALISGLCK--------ESKLDDARNLYDAMMDKG 605
Query: 482 IGPC------LVYLYIKK 493
+ PC L Y Y KK
Sbjct: 606 LSPCEVTRLTLAYEYCKK 623
>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 376
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 114/293 (38%), Gaps = 48/293 (16%)
Query: 194 IEKVISLYWEMEKKERAVLFVKAVLSRGIAY------------------AEGDGEGQQGG 235
++K IS+ WE+ KK FV+ ++ GI AEG +GG
Sbjct: 75 VDKAISI-WELMKKSG---FVEDSITYGIIIDGFCKNGYINKSLHVLEIAEG-----KGG 125
Query: 236 PTGYLAWKMMVEG-----KYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKAL 290
A+ M+ G K A+ ++ + +SG KP + Y + V ++F A+
Sbjct: 126 VLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGA-SKFDDAI 184
Query: 291 RKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSW------AIQEGGSSLYGVVH 344
R + + +D + + L G R S +++G V+
Sbjct: 185 RVFR------EMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPC--VIT 236
Query: 345 ERLLAMYICAGRGLEAERQLWEMKLV-GKEADGDLYDIVLAICASQNEGSAVSRLLSRIE 403
LL +C G +E QLW L G + D +++I++ S + L +
Sbjct: 237 YSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMN 296
Query: 404 VMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
N T + L+ G+ K G I +A ++L GL P+ + L+GL
Sbjct: 297 HWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLKGL 349
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 342 VVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSR 401
+ + ++ MY G+ A + +MKL G+ D Y +++ N + ++S
Sbjct: 432 MTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMS- 490
Query: 402 IEVMNSLCKK--KTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
E++N+ K +T S L+ GY K G +A ET ML G+ P+++ +V+ + R
Sbjct: 491 -EMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHL-AYSVMLDILLR 548
Query: 460 IQQSG 464
+SG
Sbjct: 549 FNESG 553
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 165/438 (37%), Gaps = 101/438 (23%)
Query: 116 LQLVLVYFSQEGRDSWCALEVFEWL----KKENRVDNETMELMVSIMCSWVKKYIEEERG 171
+L++V GR LE +WL ++ VDN T L++ C K Y+
Sbjct: 227 FKLMVVACCNMGR----VLEAEKWLNAMVERGFIVDNATCTLIIDAFCQ--KGYVNR--- 277
Query: 172 VGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRG---IAYAEG- 227
VV M +GL P +I+ + ++A ++ ++ RG Y
Sbjct: 278 ---VVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTT 334
Query: 228 --DGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKE--L 283
DG ++G W E + +KLV R G KP V++Y + KE L
Sbjct: 335 LIDGLCKKG-------W---TEKAFRLFLKLV---RSDGYKPNVHTYTAMINGYCKEDKL 381
Query: 284 NEFGKALRKLK----------------------GYVRAGSIAELDGKNLGLIEKYQSDLL 321
N L +++ +VRA + +L GK Y + +
Sbjct: 382 NRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI 441
Query: 322 ADG--------------SRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW-- 365
DG +++S +Q G V + L++++ R + R L
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADG-----VTYTILMSVHC---RQADTNRSLVFF 493
Query: 366 -EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKG 424
+M VG D Y +++ Q + RL + + KKT + ++ GY +
Sbjct: 494 NKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRY 553
Query: 425 GHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSL--- 481
G+ + A + +M + G P+ + A++ GL K E+ L+ + L D +
Sbjct: 554 GNTSLAVKLFQRMSNHGCAPDSITYGALISGLCK--------ESKLDDARNLYDAMMDKG 605
Query: 482 IGPC------LVYLYIKK 493
+ PC L Y Y KK
Sbjct: 606 LSPCEVTRLTLAYEYCKK 623
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 122/316 (38%), Gaps = 54/316 (17%)
Query: 181 DMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVL-SRGIAYAEGDGEGQQGGPTGY 239
+M GLKP ++ +I + E VL +K V+ S GI P
Sbjct: 234 EMQKTGLKPDYNACSALIDGFMR-EGDIDEVLRIKDVMVSCGI-------------PINL 279
Query: 240 LAWKMMVEG--------KYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALR 291
+ + +++ G K + +K +I L G KP ++ + + +E N G+AL
Sbjct: 280 ITYNVLIHGLCKFGKMEKAAEILKGMITL---GCKPNSRTFCLLIEGYCREHN-MGRALE 335
Query: 292 KLKGYVRAGSI-------AELDG----KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLY 340
L + + A ++G K+L L K + G + +
Sbjct: 336 LLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNV----------- 384
Query: 341 GVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLS 400
VV+ L+ Y GR EA R L M G D Y+ +++ + + S L
Sbjct: 385 -VVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 443
Query: 401 RIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRI 460
I+ T + GY K G + +AA+ +MLD GL P ++ G K
Sbjct: 444 EIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK-- 501
Query: 461 QQSGNVEAYLNLCKRL 476
+GN+ L++ + L
Sbjct: 502 --AGNLMEALSIFRHL 515
>gi|302788326|ref|XP_002975932.1| hypothetical protein SELMODRAFT_51678 [Selaginella moellendorffii]
gi|300156208|gb|EFJ22837.1| hypothetical protein SELMODRAFT_51678 [Selaginella moellendorffii]
Length = 570
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 28/137 (20%)
Query: 347 LLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLS------ 400
++ Y GRG E+ M L G+ D + VL C + +G+A+ R +S
Sbjct: 28 VIGAYAGNGRGEESLYLFRRMALEGERPDRHTFVRVLGACTNTAQGTAIHRHISSSGLEF 87
Query: 401 ----------------RIE----VMNSLCKKKTLSW--LLRGYIKGGHINDAAETLTKML 438
R++ V S+ +K +SW +L Y + GH +AA +M+
Sbjct: 88 DLMLQNSLVALYGRYGRVDLARSVFQSIPEKSLVSWNAMLTAYARNGHSREAAHAYNEMI 147
Query: 439 DLGLYPEYMDRVAVLQG 455
G+ P + + + G
Sbjct: 148 FTGIEPNEISTLTTVLG 164
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 19/121 (15%)
Query: 173 GDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQ 232
D ++ L +M VGLKP +M +I+ Y + E+AV + + S G+
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK--------- 616
Query: 233 QGGPTGYLAWKMMVEG-----KYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFG 287
LA ++ + +A ++ +++E+G+KP+V +Y + A+++ +++F
Sbjct: 617 ----PSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR-VDKFQ 671
Query: 288 K 288
K
Sbjct: 672 K 672
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 122/287 (42%), Gaps = 43/287 (14%)
Query: 186 GLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMM 245
G P + +I + + RA+ F++A+ +A P Y+ + ++
Sbjct: 57 GCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVA------------PDVYI-FNVL 103
Query: 246 VEGKYVD-----AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAG 300
+ G + D A+KL ++ S +KPE+ +Y ++ + K N KA L+ +R G
Sbjct: 104 IHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGN-LEKARELLEEMIRKG 162
Query: 301 SIAELDGKNLGLIEKYQS--DLLADGSRL-SSWAIQE---GGSSLYGVVHERLLAMYICA 354
GK+ I Y + + SR+ + A +E V+ +L IC
Sbjct: 163 ------GKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICK 216
Query: 355 GRGLEAERQLWE-MKLVGKEADGDLYD-IVLAICASQNEGSAVSRLLSRIEVMNSL-CKK 411
+E ++ + MKL G D Y+ I+ A+C + +++ E++ ++ C
Sbjct: 217 DGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVA-------GKVVEAAEILKTMSCSP 269
Query: 412 K--TLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
T + LL G+ K G + A E L +M + P+ + ++ GL
Sbjct: 270 DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGL 316
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 19/121 (15%)
Query: 173 GDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQ 232
D ++ L +M VGLKP +M +I+ Y + E+AV + + S G+
Sbjct: 537 NDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK--------- 587
Query: 233 QGGPTGYLAWKMMVEG-----KYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFG 287
LA ++ + +A ++ +++E+G+KP+V +Y + A+++ +++F
Sbjct: 588 ----PSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR-VDKFQ 642
Query: 288 K 288
K
Sbjct: 643 K 643
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 152/390 (38%), Gaps = 51/390 (13%)
Query: 87 FEAIEELERMTREPSDI---LEEMNDRLSARELQLVLVYFSQEGRDSWCALEVFEWLKKE 143
F ++E+ ++ ++ ++ LE + LSA+ + VL ++ + AL FEWLK
Sbjct: 80 FARVDEVLKILQKTGNVEAALESWDKSLSAKNIVTVLNNINRWEK----ALAFFEWLKAR 135
Query: 144 NR---VDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISL 200
++ T +M+ I+ + + + E+ L+ +M G++P +I+
Sbjct: 136 PELYEINRYTYNVMLKILRNGRQLELSEK--------LVEEMTGRGIQPDNYTFSTLINC 187
Query: 201 YWEMEKKERAVLFVKAVLSRGIAYAEG------DGEGQQGGPT---------GYLAWKMM 245
+ E A+ + + + S GI E D G+ G + WK+
Sbjct: 188 AKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLD 247
Query: 246 V------------EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKA--LR 291
G Y I+LV +R+SG P + + ++ L++ GK +
Sbjct: 248 TVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNA----VIMNTLMGTLSKAGKVNQAK 303
Query: 292 KLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMY 351
K+ +R ++ L+E Y D + ++ G V+ L+
Sbjct: 304 KVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKAC 363
Query: 352 ICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKK 411
+ GR +AE L EMK G D Y + A++ R+ ++ +N
Sbjct: 364 VEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDT 423
Query: 412 KTLSWLLRGYIKGGHINDAAETLTKMLDLG 441
+ ++R G I A++ +M++ G
Sbjct: 424 PLFTVMIRACKLAGEIEQASKIFDEMMESG 453
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 1/131 (0%)
Query: 332 IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL-AICASQN 390
++E G VV LL+ Y AG+ +A L +M+ G E + + Y +++ A+C ++
Sbjct: 265 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNANCYTVLIQALCRTEK 324
Query: 391 EGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRV 450
R+ +E T + L+ G+ K G I+ L M G+ P + +
Sbjct: 325 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 384
Query: 451 AVLQGLRKRIQ 461
+L K+ Q
Sbjct: 385 QILVAHEKKEQ 395
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 85/214 (39%), Gaps = 29/214 (13%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
GK DA L+ +R+ G +P Y + + A+ + +A+R R G A+
Sbjct: 288 GKMADAYDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD--- 344
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLY------GVVHERLLAMYICAGRGLEAE 361
I Y + + S W + + G S+ GV+ ++ M I E +
Sbjct: 345 -----IVTYTALI----SGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAH--EKK 393
Query: 362 RQLWE-------MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
Q E MK +G D +Y++V+ + + E RL + +E
Sbjct: 394 EQFEECLELIEKMKQIGCHPDLLIYNVVIRLACNFREVKEAVRLWNEMEANGLSPGADMF 453
Query: 415 SWLLRGYIKGGHINDAAETLTKMLDLGLY--PEY 446
++ G+ G++ +A +M+ G++ P+Y
Sbjct: 454 VIMINGFTSQGYLIEACSHFKEMVSRGIFSAPQY 487
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 150/382 (39%), Gaps = 63/382 (16%)
Query: 129 DSWC-ALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGL 187
D +C A V + K + ++ E + + + S + + R V + DLL +M GL
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLV-EXTDLLTEMGIRGL 608
Query: 188 KPGF-------------SMIEKVISLYWEM-EKKERAVLFVKAVLSRGIAYAEGDGEGQQ 233
P M++K S Y+EM E A + + + + G+ Y G +
Sbjct: 609 TPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL-YRLG-----R 662
Query: 234 GGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKL 293
L KM+ G + D E LK ++ A+ + L+E K
Sbjct: 663 IDEANLLMQKMVDHGFFPD--------HECFLKSDIR--YAAIQKIADSLDESCKTFLLP 712
Query: 294 KGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHER-----LL 348
V +IA GL + + D D R S SL G V + L+
Sbjct: 713 NNIVYNIAIA-------GLCKTGKVD---DARRFFSML------SLKGFVPDNFTYCTLI 756
Query: 349 AMYICAGRGLEAERQLWEMKLVGKEADGDLYD-IVLAICASQNEGSAVSRLLSRIEVMNS 407
Y AG EA R EM G + Y+ ++ +C S+N A RL ++
Sbjct: 757 HGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRA-QRLFHKLHQKGL 815
Query: 408 LCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVE 467
T + L+ GY K G+++ A + KM++ G+ P + A++ GL K G++E
Sbjct: 816 FPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKH----GDIE 871
Query: 468 AYLNLCKRL----SDTSLIGPC 485
+ L ++ D+ LI C
Sbjct: 872 RSMKLLNQMIKAGVDSKLIEYC 893
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 112/280 (40%), Gaps = 24/280 (8%)
Query: 186 GLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMM 245
GL P +I Y + K + + + ++ GI+ P + W ++
Sbjct: 403 GLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGIS------------PDSFTCWVLV 450
Query: 246 ----VEGKYVDAIKLVIHLRESG--LKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRA 299
EGK++ A+ LV+ L+ G + ++YSYLI A+ +E F A L+ +
Sbjct: 451 EGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIV--ALCRENRPFA-AKNLLERMSQD 507
Query: 300 GSIAELDGKNLGLIEKYQSDLLADGSRLSSWAI-QEGGSSLYGVVHERLLAMYICAGRGL 358
G EL+ N + Q D +A+ L + +E +L + +J R +
Sbjct: 508 GHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNL--ATYRAVJGCLSRLSRSM 565
Query: 359 EAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLL 418
E E + EM G D ++ + +N+ LLS + ++ + L+
Sbjct: 566 EGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNALI 625
Query: 419 RGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
R G I + E ML +GL P + V+ GL K
Sbjct: 626 RITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVIDGLWK 665
>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1025
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 93/228 (40%), Gaps = 14/228 (6%)
Query: 236 PTGYLAWKMMV-----EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKAL 290
PT + ++V EGK +DA + + E G K ++S L A+V +N+
Sbjct: 157 PTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVG-INKSEYVW 215
Query: 291 RKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADG--SRLSSWAIQEGGSSL-YGVVHERL 347
LK + ++ N+ L + L G S+ S + L V + +
Sbjct: 216 LFLKESLDRKFPLDVTTCNIVL-----NSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTI 270
Query: 348 LAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNS 407
L Y+ GR A R L +M+ G EAD Y+I++ + LL R+ +N
Sbjct: 271 LNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNL 330
Query: 408 LCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQG 455
+ + + L+ G+ G IN A +ML L P A++ G
Sbjct: 331 TPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDG 378
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 117/306 (38%), Gaps = 61/306 (19%)
Query: 173 GDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQ 232
G DLL+++ VGL+P +IS + + AV + +++
Sbjct: 117 GSAFDLLLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMA------------S 164
Query: 233 QGGPTGYLAWKMMVE-----GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFG 287
+ P + + MV GK DA ++ L E G KP+ +Y L A KE +
Sbjct: 165 ECRPDLW-TYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKE-GDAD 222
Query: 288 KALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERL 347
R + VRAG ++ D G+ + +
Sbjct: 223 TVERVCEELVRAG---------------FKKD---------------------GITYNTM 246
Query: 348 LAMYICAGRGLEAERQLW-EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMN 406
+ MY GR L+ L+ EM+ +G D Y +++ + S ++L +
Sbjct: 247 IHMYGKMGR-LDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAG 305
Query: 407 SLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNV 466
T S L+ Y KGG +A T + M+ G+ P DR+A L L I +SG++
Sbjct: 306 LKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKP---DRLAYLVML-DIIARSGDM 361
Query: 467 EAYLNL 472
+ L
Sbjct: 362 RKLMAL 367
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 91/230 (39%), Gaps = 51/230 (22%)
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKE--LNEFGKALRKLKGYVRAGSIAELDGKNL 310
A+KL+ + G KP+V +Y + + + KE L+E K L + Y
Sbjct: 35 AMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSY-------------- 80
Query: 311 GLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLV 370
GS + H +L GR ++AE+ L EM
Sbjct: 81 -------------------------GSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRK 115
Query: 371 GKEADGDLYDIVLA-ICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLRGYIKGGHI 427
G ++I++ +C G A+ +L ++ C +LS+ LL G+ K +
Sbjct: 116 GCSPSVVTFNILINFLCRKGLLGRAID-ILEKMPTHG--CTPNSLSYNPLLHGFCKEKKM 172
Query: 428 NDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLS 477
+ A + L M+ G YP+ + +L L K G V+A + L +LS
Sbjct: 173 DRAIQYLEIMVSRGCYPDIVTYNTMLTALCK----DGKVDAAVELLNQLS 218
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 130/312 (41%), Gaps = 54/312 (17%)
Query: 186 GLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMM 245
G P + +I + + RA+ F++A+ +A P Y+ + +
Sbjct: 57 GCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVA------------PDVYI-FNFL 103
Query: 246 VEGKYVD-----AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAG 300
+ G + D A+KL ++ S + P++++Y ++ + K N KA L+ +R G
Sbjct: 104 IHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGN-LEKARELLEEMIRRG 162
Query: 301 SIAELDGKNLGLIEKYQSDLLA----DGSRLSSWAIQEG----GSSLYGVVHERLLAMYI 352
GK+ I Y + + A DG + I +G G + + + ++
Sbjct: 163 ------GKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALC 216
Query: 353 CAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSR-IEVMNSLCKK 411
AGR +EA L M D ++ +L +G + +L R +EV+ +C++
Sbjct: 217 VAGRVVEAAEILKTMSC---SPDLVTFNTLL-------DGFCKAGMLPRALEVLEEMCRE 266
Query: 412 K------TLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGN 465
T + L+ G + G + A L +++ G P+ + +++ GL K SG
Sbjct: 267 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK----SGE 322
Query: 466 VEAYLNLCKRLS 477
+E L K +S
Sbjct: 323 IEEAHKLVKEMS 334
>gi|297725255|ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|215693375|dbj|BAG88757.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa Japonica Group]
Length = 492
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Query: 313 IEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGK 372
I+ + LA RL + +Q G G + RL+ AGR LEAE L EM+ +G
Sbjct: 59 IQHHAGSDLASSLRLLA-DMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGL 117
Query: 373 EADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAE 432
D Y+ +L S RLL ++ ++T LL Y + G + D+
Sbjct: 118 RPDAAHYNALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWW 177
Query: 433 TLTKMLDLGL 442
L +M G+
Sbjct: 178 VLGEMKRRGI 187
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 35/229 (15%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
GKY AI L ++E G P + +Y + L K G++ RK+ G + E+
Sbjct: 231 GKYEKAINLFERMKEMGPSPTLVTYNVILDVFGK----MGRSWRKI-----LGVLEEMRS 281
Query: 308 KNLGLIEKYQSDLLADGSR-------------LSSWAIQEGGSSLYGVVHERLLAMYICA 354
K L E S +L+ +R L S + G V + LL ++ A
Sbjct: 282 KGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGT-----VTYNALLQVFGKA 336
Query: 355 GRGLEAERQLWEMKLVGKEADGDLYDIVLAICAS---QNEGSAVSRLLSRIEVM-NSLCK 410
G EA L EM+ AD Y+ ++A A E + V ++++ VM N++
Sbjct: 337 GVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAI-- 394
Query: 411 KKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
T + ++ Y K G ++A + M + G P AVL L K+
Sbjct: 395 --TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKK 441
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 342 VVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSR 401
+ + ++ MY G+ A + +MKL G+ D Y +++ N + ++S
Sbjct: 375 MTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMS- 433
Query: 402 IEVMNSLCKK--KTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
E++N+ K +T S L+ GY K G +A ET ML G+ P+++ +V+ + R
Sbjct: 434 -EMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHL-AYSVMLDILLR 491
Query: 460 IQQSG 464
+SG
Sbjct: 492 FNESG 496
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 36/321 (11%)
Query: 162 VKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAV------LFVK 215
V++ + E R G D++ + F +EK S + EM+++ FV
Sbjct: 254 VEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVD 313
Query: 216 AVLSRGIA------YAEGDGEGQQGGPTGY--LAWKMMVEGKYVDAIKLVIHLRESGLKP 267
A G+ +A+ G Y L G+ DAI L+ + GL P
Sbjct: 314 AFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVP 373
Query: 268 EVYSYLIALTAVVKE--LNEFGKALRKL-KGYVRAGSI---AELDGKNLGLIEKYQSDLL 321
V +Y + + + KE + E L + +G V+A + + G + + DLL
Sbjct: 374 NVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLL 433
Query: 322 ADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGL-EAERQLWEMKLVGKEADGDLYD 380
+++ + + E SLYG L +C + + EA+ L +M G + +Y
Sbjct: 434 ---NQMKNKGM-ELDVSLYGT-----LIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYT 484
Query: 381 IVL-AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLRGYIKGGHINDAAETLTKM 437
++ A+ + E AV+ LL +I ++S + +++ L+ G K G I++A KM
Sbjct: 485 TIMDALFKAGKESEAVA-LLHKI--LDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKM 541
Query: 438 LDLGLYPEYMDRVAVLQGLRK 458
+LGL P A++ G K
Sbjct: 542 RELGLDPNVQAYTALIDGFCK 562
>gi|125556718|gb|EAZ02324.1| hypothetical protein OsI_24426 [Oryza sativa Indica Group]
gi|125598467|gb|EAZ38247.1| hypothetical protein OsJ_22623 [Oryza sativa Japonica Group]
Length = 478
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Query: 313 IEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGK 372
I+ + LA RL + +Q G G + RL+ AGR LEAE L EM+ +G
Sbjct: 59 IQHHAGSDLASSLRLLA-DMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGL 117
Query: 373 EADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAE 432
D Y+ +L S RLL ++ ++T LL Y + G + D+
Sbjct: 118 RPDAAHYNALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWW 177
Query: 433 TLTKMLDLGL 442
L +M G+
Sbjct: 178 VLGEMKRRGI 187
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 107/231 (46%), Gaps = 24/231 (10%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
GK+ +A + +R +GL+P+ +Y + A +E + KAL+ LK R SI
Sbjct: 586 GKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCRE-GKTSKALKLLKEMKR-NSIK---- 639
Query: 308 KNLGLIEKYQSDLLADG-SRLSSWAIQEGGSSLYG---VVHERLLAMYICAG-RGLEAER 362
NL LL G + + + + E S+ + + H+R+L C+G R +
Sbjct: 640 PNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVL--QACSGSRRPDVIL 697
Query: 363 QLWEMKL-VGKEADGDLYD-IVLAICA---SQNEGSAVSRLLSRIEVMNSLCKKKTLSWL 417
++ E+ + G AD +Y+ +V +C ++N + +L+R +++ T + L
Sbjct: 698 EIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTI----TFNAL 753
Query: 418 LRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK--RIQQSGNV 466
+ G+ K H+++A +ML GL P +L GL RI ++ V
Sbjct: 754 ILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTV 804
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 103/233 (44%), Gaps = 20/233 (8%)
Query: 244 MMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIA 303
+ + GK+ +A ++ +R GLKP+ +Y + + ++ E KAL KL ++ SI
Sbjct: 564 LCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRK-GETAKAL-KLLHEMKMSSIK 621
Query: 304 ELDGKNLGLIEKYQSDLLADGS-RLSSWAIQE---GGSSLYGVVHERLLAMYICA-GRGL 358
NL + L G+ + + + E G S + H R+L C+ R L
Sbjct: 622 P----NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA--CSQSRRL 675
Query: 359 EAERQLWE-MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW- 416
+ + E M G AD +Y+ +L + + +L E++ S T+++
Sbjct: 676 DVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLE--EMLGSGIAPDTITFN 733
Query: 417 -LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK--RIQQSGNV 466
L+ G+ K H+++A T +ML + P +L GL RI ++G V
Sbjct: 734 ALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 98/238 (41%), Gaps = 23/238 (9%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
GK+ +A +L+ + + P+V ++ + A+VKE + A L+ + +G +
Sbjct: 201 GKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKE-GDLNSAQDLLQEMISSGVCPNVVT 259
Query: 308 KNLGLIEKYQSDLLADGSRL-----SSWAIQEGGSSLYGV-----VHERLLAMYICAGRG 357
N L S L D + S + + GV + L++ I G+
Sbjct: 260 CNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKF 319
Query: 358 LEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKK----- 412
LEAE EM G D Y ++ Q SRL ++ +S+ K
Sbjct: 320 LEAEELYEEMPHRGIVPDTVTYSSMINGLCKQ------SRLDEATQMFDSMGSKSFSPNI 373
Query: 413 -TLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAY 469
T + L+ GY K G ++D E +M G+ + + +++G RK +G+++ +
Sbjct: 374 VTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIF 431
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 342 VVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSR 401
+ + ++ MY G+ A + +MKL G+ D Y +++ N + ++S
Sbjct: 400 MTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMS- 458
Query: 402 IEVMNSLCKK--KTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
E++N+ K +T S L+ GY K G +A ET ML G+ P+++ +V+ + R
Sbjct: 459 -EMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHL-AYSVMLDILLR 516
Query: 460 IQQSG 464
+SG
Sbjct: 517 FNESG 521
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 20/229 (8%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
GK+ +A + +R GLKP+ +Y + + ++ E KAL KL ++ SI
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRK-GETAKAL-KLLHEMKMSSIKP--- 622
Query: 308 KNLGLIEKYQSDLLADGS-RLSSWAIQE---GGSSLYGVVHERLLAMYICA-GRGLEAER 362
NL + L G+ + + + E G S + H R+L C+ R L+
Sbjct: 623 -NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ--ACSQSRRLDVIL 679
Query: 363 QLWE-MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLR 419
+ E M G AD +Y+ +L + + +L E++ S T+++ L+
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLE--EMLGSGIAPDTITFNALIL 737
Query: 420 GYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK--RIQQSGNV 466
G+ K H+++A T +ML + P +L GL RI ++G V
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 98/238 (41%), Gaps = 23/238 (9%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
GK+ +A +L+ + + P+V ++ + A+VKE + A L+ + +G +
Sbjct: 201 GKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKE-GDLNSAQDLLQEMISSGVCPNVVT 259
Query: 308 KNLGLIEKYQSDLLADGSRL-----SSWAIQEGGSSLYGV-----VHERLLAMYICAGRG 357
N L S L D + S + + GV + L++ I G+
Sbjct: 260 CNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKF 319
Query: 358 LEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKK----- 412
LEAE EM G D Y ++ Q SRL ++ +S+ K
Sbjct: 320 LEAEELYEEMPHRGIVPDTVTYSSMINGLCKQ------SRLDEATQMFDSMGSKSFSPNI 373
Query: 413 -TLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAY 469
T + L+ GY K G ++D E +M G+ + + +++G RK +G+++ +
Sbjct: 374 VTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIF 431
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 98/234 (41%), Gaps = 14/234 (5%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G+ V+A +L++ + G P+V SY + ++ E + L+ ++ G
Sbjct: 267 GRVVEAHQLLLQMELRGCIPDVISYSTVINGYC-QVGELQRVLKLIEEMQIKGLKPNPYT 325
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEM 367
N ++ ++ +A+ R+ I EG + GV++ L+ + G A R EM
Sbjct: 326 YNGVILLLCKTGKVAEAERVLREMISEGIAP-DGVIYTTLIDGFCKLGNVSSAYRLFDEM 384
Query: 368 KLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKK------TLSWLLRGY 421
+ ++ D IC G R++ ++ + + K+ T + L+ GY
Sbjct: 385 Q--KRKISPDFITYTAVICGLCQTG----RVMEADKLFHEMVCKRLEPDEVTYTALIDGY 438
Query: 422 IKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKR 475
K G + +A +ML +GL P + A+ GL K + E +C++
Sbjct: 439 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK 492
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 8/196 (4%)
Query: 264 GLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLAD 323
G VY++ I L + + L E GKA+ L+ R + ++ N + + L
Sbjct: 137 GFAFNVYNHNILLKGLCRNL-ECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 324 GSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL 383
L++ ++ G S V L+ + AG+ EA L EMK +G EAD +Y ++
Sbjct: 196 ALELAN-EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 384 ---AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDL 440
C + G A+ +E +S C T + L+RG+ K G + +A+E M++
Sbjct: 255 RGFCDCGELDRGKAL--FDEVLERGDSPC-AITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 441 GLYPEYMDRVAVLQGL 456
G+ P ++ GL
Sbjct: 312 GVRPNVYTYTGLIDGL 327
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Query: 174 DVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQ 233
+ V LL +M+ G++P I +++ + R ++A SRGI + +
Sbjct: 311 EAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGI---DLNTVAYN 367
Query: 234 GGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKL 293
G YL++ G Y A++L +RES +KP+ +Y I ++ K L ++ ++LR
Sbjct: 368 SGIKSYLSF-----GDYEKALELYTSMRESNVKPDAVTYNILISGSSK-LGKYTESLRFF 421
Query: 294 KGYVRAGSIAELDGK 308
+ V + + +GK
Sbjct: 422 EDMVDSKVSSTKEGK 436
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 20/229 (8%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
GK+ +A + +R GLKP+ +Y + + ++ E KAL KL ++ SI
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRK-GETAKAL-KLLHEMKMSSIK---- 621
Query: 308 KNLGLIEKYQSDLLADGS-RLSSWAIQE---GGSSLYGVVHERLLAMYICA-GRGLEAER 362
NL + L G+ + + + E G S + H R+L C+ R L+
Sbjct: 622 PNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA--CSQSRRLDVIL 679
Query: 363 QLWE-MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLR 419
+ E M G AD +Y+ +L + + +L E++ S T+++ L+
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLE--EMLGSGIAPDTITFNALIL 737
Query: 420 GYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK--RIQQSGNV 466
G+ K H+++A T +ML + P +L GL RI ++G V
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 93/228 (40%), Gaps = 14/228 (6%)
Query: 236 PTGYLAWKMMV-----EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKAL 290
PT + ++V EGK +DA + + E G K ++S L A+V +N+
Sbjct: 157 PTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVG-INKSEYVW 215
Query: 291 RKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADG--SRLSSWAIQEGGSSL-YGVVHERL 347
LK + ++ N+ L + L G S+ S + L V + +
Sbjct: 216 LFLKESLDRKFPLDVTTCNIVL-----NSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTI 270
Query: 348 LAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNS 407
L Y+ GR A R L +M+ G EAD Y+I++ + LL R+ +N
Sbjct: 271 LNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNL 330
Query: 408 LCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQG 455
+ + + L+ G+ G IN A +ML L P A++ G
Sbjct: 331 TPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDG 378
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 118/286 (41%), Gaps = 32/286 (11%)
Query: 187 LKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMV 246
+KP M +I Y + K + A+L+ ++ RG+A L + +
Sbjct: 253 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT--------YNLLVHALFM 304
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
+G+ +A +LV + GL +V++Y I + KE N KAL + R G A +
Sbjct: 305 DGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGN-VKKALEIFENMSRRGVRATVV 363
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
+ + + + +L A++ G V++ L+ + +G A + E
Sbjct: 364 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDL-VLYNALINSHSTSGNIDRAFEIMGE 422
Query: 367 MKLVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIE----VMNSLCKKK------TLS 415
M+ D Y+ ++ +C LL R++ +++ + K+ T +
Sbjct: 423 MEKKRIAPDDVTYNTLMRGLC-----------LLGRVDEARKLIDEMTKRGIQPDLVTYN 471
Query: 416 WLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQ 461
L+ GY G + DA +M++ G P + A++QGL K Q
Sbjct: 472 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 517
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 8/196 (4%)
Query: 264 GLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLAD 323
G VY++ I L + + L E GKA+ L+ R + ++ N + + L
Sbjct: 137 GFAFNVYNHNILLKGLCRNL-ECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 324 GSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL 383
L++ ++ G S V L+ + AG+ EA L EMK +G EAD +Y ++
Sbjct: 196 ALELAN-EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 384 ---AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDL 440
C + G A+ +E +S C T + L+RG+ K G + +A+E M++
Sbjct: 255 RGFCDCGELDRGKAL--FDEVLERGDSPC-AITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 441 GLYPEYMDRVAVLQGL 456
G+ P ++ GL
Sbjct: 312 GVRPNVYTYTGLIDGL 327
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 88/224 (39%), Gaps = 29/224 (12%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
GK DA L+ +R+ G +P V Y + + A+ + +A+R R G A+
Sbjct: 285 GKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD--- 341
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLY------GVVHERLLAMYICAGRGLEAE 361
I Y + + S W + + G S+ GV+ ++ M I E +
Sbjct: 342 -----IVTYTALI----SGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAH--EKK 390
Query: 362 RQLWE-------MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
Q E MK G D +Y++V+ + E RL + +E T
Sbjct: 391 EQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTF 450
Query: 415 SWLLRGYIKGGHINDAAETLTKMLDLGLY--PEYMDRVAVLQGL 456
++ G+ G + +A +M+ G++ P+Y ++L L
Sbjct: 451 VIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNL 494
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 32/224 (14%)
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGL 312
A++++ + + GL+P+ Y + L A+ K GS+ E +
Sbjct: 186 AVEVLDEMPKYGLEPDEYVFGCLLDALCKN-----------------GSVKEASKVFEDM 228
Query: 313 IEKYQSDLLADGSRLSSWA--------------IQEGGSSLYGVVHERLLAMYICAGRGL 358
EK+ +L S L W ++E G VV LL+ Y AG+
Sbjct: 229 REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 359 EAERQLWEMKLVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWL 417
+A + +M+ G E + + Y +++ A+C ++ R+ +E T + L
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 418 LRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQ 461
+ G+ K G I+ L M G+ P + + ++ K+ Q
Sbjct: 349 ISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQ 392
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 12/216 (5%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKE--LNEFGKALRKL-KGYVRAGSIAE 304
G+ DAI L+ + G+ V +Y + + + KE + E LR + K VRA +
Sbjct: 342 GRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLY 401
Query: 305 LDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQL 364
+ + K L S + + + E SLYG + + L ++ + EA+ L
Sbjct: 402 TTLIHGHFMNKNSEKALGLLSEMKNKGL-ELDISLYGALIQGLCNVH----KLDEAKSLL 456
Query: 365 WEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLRGYI 422
+M G E + +Y ++ C + +L +I ++S + +++ L+ G
Sbjct: 457 TKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKI--LDSGFQPNVITYCALIDGLC 514
Query: 423 KGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
K G I++A KM DLGL P A++ GL K
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCK 550
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 85/210 (40%), Gaps = 2/210 (0%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
+GK +A+ L+ ++E GL P+ YSY + A +E A+ L+ + G + ++
Sbjct: 342 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE-GRLDVAIEFLETMISDGCLPDIV 400
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
N L ++ AD + + E G S + + + +G + A + E
Sbjct: 401 NYNTVLATLCKNG-KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 459
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
M G + D Y+ +++ + LL + T + +L G+ K
Sbjct: 460 MVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 519
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
I DA + L M+ G P +++G+
Sbjct: 520 IEDAIDVLDSMVGNGCRPNETTYTVLIEGI 549
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 10/221 (4%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
GK +A + ++ +GLKP+ +Y + A +E + KAL+ L G R+ L
Sbjct: 573 GKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSRE-GKTAKALKLLNGMKRSSIKPNLIT 631
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICA-GR--GLEAERQL 364
+ ++ +++ + L + + G S + H R+L C+ GR L E
Sbjct: 632 YSTLIVGLFEAGAVEKAKYLLN-EMSSSGFSPTSLTHRRVLQA--CSQGRRSDLILEIHE 688
Query: 365 WEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKG 424
W M G AD +Y+ ++ + +L + T + L+ G+ K
Sbjct: 689 WMMN-AGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKS 747
Query: 425 GHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK--RIQQS 463
GH+++A T +ML G+ P +L GL RI +S
Sbjct: 748 GHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGES 788
>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
Length = 697
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 14/254 (5%)
Query: 243 KMMVEGKYVDAIK-LVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGS 301
K + EG ++A++ L L+ SG P VY+Y I + KE G+ + + +
Sbjct: 158 KCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKE--RHGQNIDMEQASLILEE 215
Query: 302 IAELDGKNLGLIEK--YQSDLLADGSRLSSW-AIQEGGSS---LYGVVHERLLAMYICAG 355
+ E G+N ++ Y L GS +W IQ+ SS L + L+ + G
Sbjct: 216 MEE-KGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKG 274
Query: 356 RGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLS 415
R EA + L EMK G D Y I++ ++ + + L+ +E N +
Sbjct: 275 RPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCT 334
Query: 416 WLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKR 475
+L G G +ND ++ G + + ++ G K NV++ NL
Sbjct: 335 SVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLK----GHNVKSANNLVHE 390
Query: 476 LSDTSLIGPCLVYL 489
+ L+ ++Y+
Sbjct: 391 MRKNGLVPDYIIYI 404
>gi|357503669|ref|XP_003622123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497138|gb|AES78341.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 495
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 346 RLLAMYIC-AGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEV 404
++ ++C AGR E L EMK G D Y+ V+ C ++ +L +
Sbjct: 240 NVMVSWLCEAGRVKEGYAVLQEMKKKGLNPDVSSYNYVMEACCKEDLLRPARKLWDEMFA 299
Query: 405 MNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
KT + L+ +++ G I +A +M+D G+ P+ +LQG
Sbjct: 300 SGCCGNLKTYNVLIHKFLEEGLIEEARTLFNRMVDKGVEPDSASYTFLLQGF 351
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 364 LWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIK 423
L +M G + +Y ++ + +N+ S +LL + VM + +T + ++ G K
Sbjct: 241 LRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCK 300
Query: 424 GGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
I+DA + + +ML G YP+ M +L GL
Sbjct: 301 VNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGL 333
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 364 LWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIK 423
L +M G + +Y ++ + +N+ S +LL + VM + +T + ++ G K
Sbjct: 241 LRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCK 300
Query: 424 GGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
I+DA + + +ML G YP+ M +L GL
Sbjct: 301 VNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGL 333
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 12/216 (5%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKE--LNEFGKALRKL-KGYVRAGSIAE 304
G+ DAI L+ + G+ V +Y + + + KE + E LR + K VRA +
Sbjct: 342 GRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLY 401
Query: 305 LDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQL 364
+ + K L S + + + E SLYG + + L ++ + EA+ L
Sbjct: 402 TTLIHGHFMNKNSEKALGLLSEMKNKGL-ELDISLYGALIQGLCNVH----KLDEAKSLL 456
Query: 365 WEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLRGYI 422
+M G E + +Y ++ C + +L +I ++S + +++ L+ G
Sbjct: 457 TKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKI--LDSGFQPNVITYCALIDGLC 514
Query: 423 KGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
K G I++A KM DLGL P A++ GL K
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCK 550
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 151/390 (38%), Gaps = 66/390 (16%)
Query: 127 GRDSWC-ALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCV 185
G SW AL+ FEWL + + + + +++ ++ + I EE V +
Sbjct: 166 GESSWRRALDAFEWLARSSAPASRAVAVVLGVLGRARQDSIAEE----------VFLRFA 215
Query: 186 GLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIA--YAEGDGEGQQGGPTGYLAWK 243
G + ++ +Y + + A + + RGI + +G LA
Sbjct: 216 GEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAG 275
Query: 244 MMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELN--------------EFGKA 289
+ A+ L+ +R+SGL+P+V +Y ++A + N E
Sbjct: 276 V--------ALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPD 327
Query: 290 LRKLKGYV----RAGSIAELDGKNLGLIEK-YQSDLLADGSRLSSWA------------- 331
L V R G E + L+EK + D + S L ++A
Sbjct: 328 LWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCE 387
Query: 332 -IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW-EMKLVGKEADGDLYDIVLAICASQ 389
+ + G + + ++ MY GR L+ L+ EM+ +G D Y +++
Sbjct: 388 QLVKAGFKKNEITYNTMIHMYGKMGR-LDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKM 446
Query: 390 NEGSAVSRLLSRIEVMNSLCKKKTL---SWLLRGYIKGGHINDAAETLTKMLDLGLYPEY 446
N + ++L E M K TL S L+ Y KGG DA T M+ G+ P
Sbjct: 447 NRIAEAGKVL---EDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKP-- 501
Query: 447 MDRVAVLQGLRKRIQQSGNVEAYLNLCKRL 476
DR+A L L +SG+ E L L +++
Sbjct: 502 -DRLAYLVML-DVFARSGDTEKMLCLYRKM 529
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 10/217 (4%)
Query: 244 MMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIA 303
+ V G+ DA+ + + G P V +Y I L A KE + + +A+ L G
Sbjct: 261 LCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKE-SGYRQAMALLDEMRAKGCEP 319
Query: 304 ELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQ 363
++ N+ LI ++ D + + G V + +L + R E E
Sbjct: 320 DIVTYNV-LINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEEL 378
Query: 364 LWEMKLVGKEADGDLYD-IVLAICASQNEGSAVSRLLSRIEVMN---SLCKKKTLSWLLR 419
L EM D ++ IV ++C + V R + ++ M+ + T S +L
Sbjct: 379 LAEMTSNNCAPDEVTFNTIVTSLC----QQGLVDRAIEVVDHMSEHGCVADIVTYSSILD 434
Query: 420 GYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
G G ++DA E L+++ G P+ + VL+GL
Sbjct: 435 GLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGL 471
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 102/241 (42%), Gaps = 14/241 (5%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
EG D++++ + G P VY+ L ++VK + LK ++ ++
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDV-SVWSFLKEMLKRKICPDVA 194
Query: 307 GKNLGLIEKYQSDLLADGS-RLSSWAIQEGGSSLYG---VVHERLLAMYICAGRGLEAER 362
N+ LI L A+GS + SS+ +Q+ S Y V + +L Y GR A
Sbjct: 195 TFNI-LINV----LCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 249
Query: 363 QLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYI 422
L M L G AD Y++++ N + LL + + T + LL G+
Sbjct: 250 LLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFS 309
Query: 423 KGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLI 482
G + A + L +ML GL P ++ A++ G I + GN + L + + LI
Sbjct: 310 NEGKVLIARQLLNEMLTFGLSPNHVTFNALIDG---HISE-GNFKEALKMFHMMEAKGLI 365
Query: 483 G 483
G
Sbjct: 366 G 366
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 20/229 (8%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
GK+ +A + +R GLKP+ +Y + + ++ E KAL KL ++ SI
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRK-GETAKAL-KLLHEMKMSSIKP--- 622
Query: 308 KNLGLIEKYQSDLLADGS-RLSSWAIQE---GGSSLYGVVHERLLAMYICA-GRGLEAER 362
NL + L G+ + + + E G S + H R+L C+ R L+
Sbjct: 623 -NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA--CSQSRRLDVIL 679
Query: 363 QLWE-MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLR 419
+ E M G AD +Y+ +L + + +L E++ S T+++ L+
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLE--EMLGSGIAPDTITFNALIL 737
Query: 420 GYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK--RIQQSGNV 466
G+ K H+++A T +ML + P +L GL RI ++G V
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786
>gi|388500892|gb|AFK38512.1| unknown [Medicago truncatula]
Length = 249
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 326 RLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAI 385
+L IQ+G + L+ + EA + +M G + D Y+ +
Sbjct: 2 KLLEMTIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARA 61
Query: 386 CASQNEGSAVSRLLSRIEVMNSLCK--KKTLSWLLRGYIKGGHINDAAETLTKMLDLGLY 443
A E RL+ +++ N+ K ++T ++RGY K G++ +A L KM +LG++
Sbjct: 62 FAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVH 121
Query: 444 PEYMDRVAVLQG 455
P + ++++G
Sbjct: 122 PNPVVFNSLIKG 133
>gi|154301399|ref|XP_001551112.1| hypothetical protein BC1G_10369 [Botryotinia fuckeliana B05.10]
Length = 745
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 342 VVHERLLAMYICAGRGLEAERQLWEMKLVG-KEADGDLYDIVLAICASQNEGSAVSRLLS 400
++ E+LLA Y A L RQ ++LVG + D D+Y+I L IC +N+ +AV + LS
Sbjct: 485 MLQEKLLASY-AAKEQLTEFRQAMAIRLVGSRTPDFDVYNIHLRICVIRNQWNAVLKTLS 543
Query: 401 RIEVMNSLCKKKTLS 415
+ + K ++S
Sbjct: 544 DMRINRIPVKPTSIS 558
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 16/234 (6%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGY---VRAGSIAE 304
G+Y +A+KL+ +L E G+ P V +A +++ G R Y V+ G
Sbjct: 446 GRYDEAMKLLENLLEKGIPPSV----VAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPS 501
Query: 305 LDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQL 364
+ LI + L D + ++ + + + G + + LL Y G AE
Sbjct: 502 SSTCSSLLISLVRKGSL-DEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLW 560
Query: 365 WEMKLVGKEADGDLYDIVL-AICAS---QNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRG 420
EMK G D + + +C S + S +L + V N+ L+ G
Sbjct: 561 NEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNS----LIGG 616
Query: 421 YIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCK 474
+ K G +N+A + + +M GL P+ ++ GL K+ + +E ++++C+
Sbjct: 617 FCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCR 670
>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
Length = 1031
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 93/228 (40%), Gaps = 14/228 (6%)
Query: 236 PTGYLAWKMMV-----EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKAL 290
PT + ++V EGK +DA + + E G K ++S L A+V +N+
Sbjct: 157 PTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVG-INKSEYVW 215
Query: 291 RKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADG--SRLSSWAIQEGGSSL-YGVVHERL 347
LK + ++ N+ L + L G S+ S + L V + +
Sbjct: 216 LFLKESLDRKFPLDVTTCNIVL-----NSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTI 270
Query: 348 LAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNS 407
L Y+ GR A R L +M+ G EAD Y+I++ + LL R+ +N
Sbjct: 271 LNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNL 330
Query: 408 LCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQG 455
+ + + L+ G+ G IN A +ML L P A++ G
Sbjct: 331 TPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDG 378
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 332 IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYD---IVLAICAS 388
I+E G VV+ LL Y AG+ ++A L EM+ KE + ++ ++ A+CA
Sbjct: 286 IREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMR--RKECEPNVMSFTTLIQALCAK 343
Query: 389 QNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMD 448
+ A+ R+ ++ T + L+ G+ K G I+ E L M+ G P M
Sbjct: 344 KKMEEAM-RVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMT 402
Query: 449 RVAVLQGLRKR 459
+ ++ K+
Sbjct: 403 YLHIMAAHEKK 413
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 112/256 (43%), Gaps = 48/256 (18%)
Query: 240 LAWKMMVEGKYVD-----AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKAL--RK 292
++W ++ G + A++LV+ +++ G +P+ I L V+ + G + +
Sbjct: 214 VSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDS----ITLVTVLPAAADVGLLMVGKS 269
Query: 293 LKGY-VRAGSIAELDGKNLGLIEKYQ-------SDLLADG---SRLSSWA------IQEG 335
+ GY +RAG A+L + L + Y + L+ DG + SW +Q G
Sbjct: 270 IHGYAIRAG-FAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNG 328
Query: 336 GSSLYGVVHERLL-------------AMYICAGRGLEAERQLWEMKLVGKEADGDLYDIV 382
V E++L A++ CA G + ER + K V + G ++
Sbjct: 329 EPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG-DLERGKFVHKFVDQLNLGSDISVM 387
Query: 383 LAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLRGYIKGGHINDAAETLTKMLDL 440
++ + S R+ ++ N+L + +SW ++ GY + G +++A ++M L
Sbjct: 388 NSLISMY---SKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSL 444
Query: 441 GLYPEYMDRVAVLQGL 456
G+ P+ V+V+ L
Sbjct: 445 GMKPDSFTMVSVIPAL 460
>gi|357499079|ref|XP_003619828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494843|gb|AES76046.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 895
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 15/162 (9%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
E Y+ A KL++ ++ GL+P ++Y + A+V + FG A+R LK ++
Sbjct: 374 EKNYMLAWKLILQMQSLGLQPSSHTYNGLIRAIVSQ-RRFGDAMRMLK---------KMQ 423
Query: 307 GKNLGLIEKYQSDLLADGSR-----LSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAE 361
+NL L++ + L SR L+ + + LY + LLA + A
Sbjct: 424 QENLKLVDSTLATLSVAFSRELQLDLAESLLNQISECLYPHPYNALLASCDALNQPERAV 483
Query: 362 RQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIE 403
R +M+ + D Y+++ ++ N S +LS+++
Sbjct: 484 RVFAKMRKIKLLPDMRTYELLFSLFGIVNAPYEDSNMLSQVD 525
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 76/390 (19%), Positives = 152/390 (38%), Gaps = 51/390 (13%)
Query: 87 FEAIEELERMTREPSDI---LEEMNDRLSARELQLVLVYFSQEGRDSWCALEVFEWLKKE 143
F ++E+ ++ ++ ++ LE + LSA+ + VL ++ + AL FEWLK
Sbjct: 80 FARVDEVLKIVQKTGNVEAALESWDKSLSAKNIVTVLNNINRWEK----ALAFFEWLKAR 135
Query: 144 NR---VDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISL 200
++ T +M+ I+ + + + E+ L+ +M G++P +I+
Sbjct: 136 PELYEINRYTYNVMLKILRNGRQLELSEK--------LVEEMTGRGIQPDNYTFSTLINC 187
Query: 201 YWEMEKKERAVLFVKAVLSRGIAYAEG------DGEGQQGGPT---------GYLAWKMM 245
+ E A+ + + + S GI E D G+ G + WK+
Sbjct: 188 AKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLD 247
Query: 246 V------------EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKA--LR 291
G Y ++LV +R+SG P + + ++ L++ GK +
Sbjct: 248 TVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNA----VIMNTLMGTLSKAGKVNQAK 303
Query: 292 KLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMY 351
K+ +R ++ L+E Y D + ++ G V+ L+
Sbjct: 304 KVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKAC 363
Query: 352 ICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKK 411
+ GR +AE L EMK G D Y + A++ R+ ++ +N
Sbjct: 364 VEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDT 423
Query: 412 KTLSWLLRGYIKGGHINDAAETLTKMLDLG 441
+ ++R G I A++ +M++ G
Sbjct: 424 PLFTVMIRACKLAGEIEQASKIFDEMMESG 453
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 97/255 (38%), Gaps = 45/255 (17%)
Query: 212 LFVKAVLSRG---IAYAEGDGEGQQGGPTGYLAWKMMVE-----GKYVDAIKLVIHLRES 263
+ + ++ SRG +A+ D + G + + +++E G+ +A++L L
Sbjct: 171 IMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSR 230
Query: 264 GLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLAD 323
GL+P++Y+Y + + KE E +AL ++ G ++ N+ L D
Sbjct: 231 GLRPDLYTYNAIIRGICKEGME-DRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWED 289
Query: 324 GSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL 383
G RL + G V H L++ + GR EA L MK G D YD
Sbjct: 290 GERLMKDMVLSGCEPNV-VTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYD--- 345
Query: 384 AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLY 443
L+ + K G ++ A E L KM+ G
Sbjct: 346 --------------------------------PLISAFCKEGRLDLAIEYLEKMVSDGCL 373
Query: 444 PEYMDRVAVLQGLRK 458
P+ ++ +L L K
Sbjct: 374 PDIVNYNTILATLCK 388
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 355 GRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
G+ +A L M G E D Y+ ++ NE + S + ++ S+C +
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCSPDVV 278
Query: 415 SW--LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQ------SGNV 466
++ ++ GY K G + +A+ L ML LG+YP + ++ G K + G +
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 467 EAYLNLCKRLSDTSLI-GPCLVYLYIKKYKLW 497
++ ++ TSLI G C V + ++LW
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLW 370
>gi|347442103|emb|CCD35024.1| hypothetical protein [Botryotinia fuckeliana]
Length = 822
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 342 VVHERLLAMYICAGRGLEAERQLWEMKLVG-KEADGDLYDIVLAICASQNEGSAVSRLLS 400
++ E+LLA Y A L RQ ++LVG + D D+Y+I L IC +N+ +AV + LS
Sbjct: 485 MLQEKLLASY-AAKEQLTEFRQAMAIRLVGSRTPDFDVYNIHLRICVIRNQWNAVLKTLS 543
Query: 401 RIEVMNSLCKKKTLS 415
+ + K ++S
Sbjct: 544 DMRINRIPVKPTSIS 558
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 355 GRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
G+ +A L M G E D Y+ ++ NE + S + ++ S+C +
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCSPDVV 278
Query: 415 SW--LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQ------SGNV 466
++ ++ GY K G + +A+ L ML LG+YP + ++ G K + G +
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 467 EAYLNLCKRLSDTSLI-GPCLVYLYIKKYKLW 497
++ ++ TSLI G C V + ++LW
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLW 370
>gi|255557939|ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540762|gb|EEF42322.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 94/222 (42%), Gaps = 22/222 (9%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G+ ++A L + GLKP + Y I L +K KG +R
Sbjct: 70 GRTLEAEALYQEMMCFGLKPRLKLYNIMLRGFLK------------KGLLRVAERVLRIL 117
Query: 308 KNLGLIEKYQS-----DLLADGSRL-SSWAI----QEGGSSLYGVVHERLLAMYICAGRG 357
+LGL ++ D + RL +W++ ++ G L V+ +++ +Y G
Sbjct: 118 DDLGLHRNQETYEILLDYNVNAGRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMW 177
Query: 358 LEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWL 417
+A + E++ +G D +Y+ ++ E +LS ++ T + L
Sbjct: 178 KKAIGIIEEIREMGMPLDKHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSL 237
Query: 418 LRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
+R + K G+++ A E +KM GLYP+ V ++ L ++
Sbjct: 238 IRWHCKAGNLSKALELFSKMQAQGLYPDPKILVTIISRLAEQ 279
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 152/377 (40%), Gaps = 47/377 (12%)
Query: 111 LSARELQLVLVYFSQEGRDSWCALEVFEWLKKENRVDNETMELMVSI-MCSWVKKYIEEE 169
SA L+L + G+ AL+VF+ ++ T+ +S+ C+ + + +
Sbjct: 171 FSAASFDLLLRALANAGQLDG-ALQVFDEMR--------TLGCRLSMRSCNSILNRLAQT 221
Query: 170 RGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDG 229
+G V + M G P + + Y +++ A+ FV+ + G+ E +
Sbjct: 222 GDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGV---EVNL 278
Query: 230 EGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKA 289
GY G+ DA +++ L G P + +Y + + E K
Sbjct: 279 VAYHAVMNGYCE-----VGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNE-----KN 328
Query: 290 LRKLKGYV---RAGSIAELDGKNLG-LIEKY-QSDLLADGSRLSSWAIQEGGSSLYGVVH 344
+ + +G V R +D G +I Y Q + D +RL + + + + V+
Sbjct: 329 MEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMV-DSRLQVNLFVY 387
Query: 345 ERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSR-IE 403
++ Y GR +EA L EM VG D Y+ ++ +G L+++ E
Sbjct: 388 NIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLV-------DGYCKKGLMNKAFE 440
Query: 404 VMNSLCKK----KTLSW--LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLR 457
N++ + TL++ LL+G+ G I+DA ML G+ P + +L G
Sbjct: 441 TYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFF 500
Query: 458 KRIQQSGNVEAYLNLCK 474
K SG E LNL K
Sbjct: 501 K----SGKTEKALNLWK 513
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 121/313 (38%), Gaps = 48/313 (15%)
Query: 181 DMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVL-SRGIAYAEGDGEGQQGGPTGY 239
+M GLKP ++ +I + E VL +K V+ S GI P
Sbjct: 35 EMQKTGLKPDYNACSALIDGFMR-EGDIDEVLRIKDVMVSCGI-------------PINL 80
Query: 240 LAWKMMVEG-----KYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLK 294
+ + +++ G K A +++ + G KP ++ + + +E N G+AL L
Sbjct: 81 ITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHN-MGRALELLD 139
Query: 295 GYVRAGSI-------AELDG----KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVV 343
+ + A ++G K+L L K + G + + VV
Sbjct: 140 EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNV------------VV 187
Query: 344 HERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIE 403
+ L+ Y GR EA R L M G D Y+ +++ + + S L I+
Sbjct: 188 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 247
Query: 404 VMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQS 463
T + GY K G + +AA+ +MLD GL P ++ G K +
Sbjct: 248 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK----A 303
Query: 464 GNVEAYLNLCKRL 476
GN+ L++ + L
Sbjct: 304 GNLMEALSIFRHL 316
>gi|356528730|ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Glycine max]
Length = 963
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 94/233 (40%), Gaps = 26/233 (11%)
Query: 252 DAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRA----------GS 301
+A+ + H+R G P+ + + + V+K++ +F +A R KG+ S
Sbjct: 158 EALLWIRHMRVRGFFPDEVT-MCTVVKVLKDVGDFDRAHRFYKGWCEGKVELNDLELEDS 216
Query: 302 IAELDGKN------LGLIEKYQSDLLADGSR--LSSWAIQEGGSSLYGVVHERL------ 347
+ + N + + ++L G R +S A SSL G RL
Sbjct: 217 LGINNSSNGSASMGISFKQFLSTELFKIGGRAPVSGEARSTNSSSLNGPQKPRLSNTYNV 276
Query: 348 -LAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMN 406
+ +Y AGR EA EM G D ++ ++ +C SQ + + LL +E
Sbjct: 277 LIDLYGKAGRLSEAAEVFAEMLKAGVAVDVWTFNTMIFVCGSQGDLAEAEALLGMMEEKG 336
Query: 407 SLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
KT + L Y + I A ++ + GL P+ + A+L L ++
Sbjct: 337 VAPDTKTFNIFLSLYAEARDIGAAVLCYKRIREAGLCPDEVTYRALLGVLCRK 389
>gi|449449102|ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
gi|449510601|ref|XP_004163711.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
Length = 849
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 342 VVHERLLAMYICA-GRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLS 400
+ H LL +C GR +EA L +M +G L DIV + A+ + +++L
Sbjct: 560 IKHSTLLVKQLCKNGRAIEASNFLADMV-----CEGFLPDIV-SYSAAMDGLVKINKLDR 613
Query: 401 RIEVMNSLCKKK------TLSWLLRGYIKGGHINDAAETLTKMLDLGLYP 444
+E+ +C + + + L++GY K G +N+A L KM GL P
Sbjct: 614 ALELFQDICTRGCRPDVVSHNILIKGYCKAGKVNEAYNFLHKMRVAGLVP 663
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 151/390 (38%), Gaps = 66/390 (16%)
Query: 127 GRDSWC-ALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCV 185
G SW AL+ FEWL + + + + +++ ++ + I EE V +
Sbjct: 166 GESSWRRALDAFEWLARSSAPASRAVAVVLGVLGRARQDSIAEE----------VFLRFA 215
Query: 186 GLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIA--YAEGDGEGQQGGPTGYLAWK 243
G + ++ +Y + + A + + RGI + +G LA
Sbjct: 216 GEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAG 275
Query: 244 MMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELN--------------EFGKA 289
+ A+ L+ +R+SGL+P+V +Y ++A + N E
Sbjct: 276 V--------ALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPD 327
Query: 290 LRKLKGYV----RAGSIAELDGKNLGLIEK-YQSDLLADGSRLSSWA------------- 331
L V R G E + L+EK + D + S L ++A
Sbjct: 328 LWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCE 387
Query: 332 -IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW-EMKLVGKEADGDLYDIVLAICASQ 389
+ + G + + ++ MY GR L+ L+ EM+ +G D Y +++
Sbjct: 388 QLVKAGFKKNEITYNTMIHMYGKMGR-LDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKM 446
Query: 390 NEGSAVSRLLSRIEVMNSLCKKKTL---SWLLRGYIKGGHINDAAETLTKMLDLGLYPEY 446
N + ++L E M K TL S L+ Y KGG DA T M+ G+ P
Sbjct: 447 NRIAEAGKVL---EDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKP-- 501
Query: 447 MDRVAVLQGLRKRIQQSGNVEAYLNLCKRL 476
DR+A L L +SG+ E L L +++
Sbjct: 502 -DRLAYLVML-DVFARSGDTEKMLCLYRKM 529
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 84/210 (40%), Gaps = 2/210 (0%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
+GK +A+ L+ ++E GL P+ YSY + A +E A+ L+ + G + ++
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE-GRLDVAIEFLETMISDGCLPDIV 404
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
N L ++ AD + + E G S + + + +G + A + E
Sbjct: 405 NYNTVLATLCKNG-KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
M G + D Y+ +++ + LL + T + +L G+ K
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
I DA L M+ G P +++G+
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGI 553
>gi|334187948|ref|NP_001190400.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332006093|gb|AED93476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 53/122 (43%)
Query: 334 EGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGS 393
EG S +L+ + I GR EA+ + G Y +LA Q +
Sbjct: 38 EGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYG 97
Query: 394 AVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVL 453
++S ++S +E + + ++ + + G++ DA + L KM +LGL P ++
Sbjct: 98 SISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLI 157
Query: 454 QG 455
+G
Sbjct: 158 KG 159
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 332 IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL-AICASQN 390
+ + G +L V + L++ AGR ++AER L EM G + D Y +V+ A C + +
Sbjct: 443 MSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGD 502
Query: 391 EGSAVSRLLSRIEVMNSLCKKK---TLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYM 447
V ++ M + K T + ++ G+ G + +A L ML++G+ P +
Sbjct: 503 ----VKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDI 558
Query: 448 DRVAVLQG 455
+L G
Sbjct: 559 TYNILLDG 566
>gi|359484961|ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 609
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 79 EDEMSEEFFEAIEELERMTREPSDILEEMNDRLSARELQLVLVYFSQEGRDSWCALEVFE 138
E +++EE F EE +++ R+P L +LVL+Y + + +E+ +
Sbjct: 310 EVKVAEELFREAEE-KKILRDPEVFL------------KLVLMYVEEGLMER--TIEIVK 354
Query: 139 WLKKENRVDNETMELMVSIMCSWVKKYIEEE--RGVGDVVDLLVDMDCVGLKPGFSMIEK 196
+K N + + I C+ V + ++ R V D L+ C +PG
Sbjct: 355 AMK------NVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGC---EPGQVTYAS 405
Query: 197 VISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMV--EGKYVDAI 254
+I++Y ME L+ KA + ++E + +G Y + +M G+ +A+
Sbjct: 406 IINVYCRME------LYSKA----EMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAM 455
Query: 255 KLVIHLRESGLKPEVYSY--LIALTAVVKELNEFGKALRKLK 294
+LV ++E G KP V+ Y L+ + VK L + K +++K
Sbjct: 456 RLVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMK 497
>gi|255553476|ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543051|gb|EEF44586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 343 VHERLLAMYICAGRGLEAERQLWEMKLVGK-EADGDLYDIVLAICASQNEGSAVSRLLSR 401
V+ L++ Y +G +A + EMK V + D Y +++ IC + + R+LS
Sbjct: 165 VYTALVSAYGESGLLAKAFSTVDEMKSVSDCKPDVYTYSVLINICTKLHRFDLIGRILSE 224
Query: 402 IEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLG 441
+ + C T + ++ GY K + +LT M+++G
Sbjct: 225 MSYLGVECSTVTFNTIINGYGKAKMFREMENSLTNMIEIG 264
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 116/291 (39%), Gaps = 48/291 (16%)
Query: 240 LAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRA 299
+A+ + G +A+ L+ + ESGL+P ++ A A G+ R G V
Sbjct: 117 MAFCLTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFP-----GELFRSSGGTVLG 171
Query: 300 GSIAE-LDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYI---CAG 355
+I G ++ + +G +++ + G VV ++ Y+ CAG
Sbjct: 172 FAIKTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAG 231
Query: 356 RGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNE---GSAVSRLLSRIEVMNSLC--- 409
+ +E + E G E DG +++ CA Q G + L+ R+ +++ C
Sbjct: 232 KAVELFLGMLE---DGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSC 288
Query: 410 --------------------------KKKTLSW--LLRGYIK-GGHINDAAETLTKMLDL 440
+SW L+ GY++ GG N+A E L +ML+
Sbjct: 289 GLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNE 348
Query: 441 GLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCK-RLSDTSLIGPCLVYLY 490
+ P ++ ++L+ Q + + + K + + +++G LV +Y
Sbjct: 349 SIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMY 399
>gi|225451505|ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
[Vitis vinifera]
Length = 660
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 347 LLAMYIC-AGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVM 405
++ ++C AGR EA L EMK G + D Y+ ++ C ++ RL +
Sbjct: 403 VMVSFLCKAGRVREAYGVLQEMKKNGLDPDISSYNCLMEACCREDLLRPAKRLWDEMFAS 462
Query: 406 NSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
KT + L++ + + G I +A ML+ G+ P+ ++L+GL
Sbjct: 463 GYGVNLKTYNILIQKFSEIGQIQEAQWLFQHMLEKGVNPDATTYTSLLEGL 513
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 112/256 (43%), Gaps = 48/256 (18%)
Query: 240 LAWKMMVEGKYVD-----AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKAL--RK 292
++W ++ G + A++LV+ +++ G +P+ I L V+ + G + +
Sbjct: 214 VSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDS----ITLVTVLPAAADVGLLMVGKS 269
Query: 293 LKGY-VRAGSIAELDGKNLGLIEKYQ-------SDLLADG---SRLSSWA------IQEG 335
+ GY +RAG A+L + L + Y + L+ DG + SW +Q G
Sbjct: 270 IHGYAIRAG-FAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNG 328
Query: 336 GSSLYGVVHERLL-------------AMYICAGRGLEAERQLWEMKLVGKEADGDLYDIV 382
V E++L A++ CA G + ER + K V + G ++
Sbjct: 329 EPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG-DLERGKFVHKFVDQLNLGSDISVM 387
Query: 383 LAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLRGYIKGGHINDAAETLTKMLDL 440
++ + S R+ ++ N+L + +SW ++ GY + G +++A ++M L
Sbjct: 388 NSLISMY---SKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSL 444
Query: 441 GLYPEYMDRVAVLQGL 456
G+ P+ V+V+ L
Sbjct: 445 GMKPDSFTMVSVIPAL 460
>gi|449442054|ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g14080-like [Cucumis sativus]
Length = 635
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 351 YIC-AGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLC 409
++C AG+ EA L EMK G + D Y+ VL C ++ +L +
Sbjct: 407 FLCKAGKVKEAYGVLQEMKKNGFDPDVSFYNSVLEACCREDLLRPARKLWDEMFAGGCCG 466
Query: 410 KKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAY 469
KT S L++ + K I +A + ML + P+ ++LQGL + Q E +
Sbjct: 467 NLKTYSILIQKFSKSNQIEEALVLYSHMLGKNVEPDIAIYTSLLQGLCQDSQLEAAFEVF 526
>gi|255661004|gb|ACU25671.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 369
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 33/262 (12%)
Query: 232 QQGGPTGYLAWKMMV-----EGKYVDAIKLVIHLRESGLKPE--VYSYLIALTAVVKELN 284
Q+GG A+ M+ E K A+ ++ + +SG KP VY+ LI +L+
Sbjct: 122 QKGGVLDAFAYSAMINALCKEAKLEKAVCVLNGMIKSGCKPNTCVYNALIKGLVGASKLD 181
Query: 285 EFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVH 344
+ A+R S ++ N+ + ++ D + L +++G V+
Sbjct: 182 D---AIRVFHEMGTTHSPPDIVTYNILINGLFKGDRFGEAYDLVKEMLEKGLDP--SVIT 236
Query: 345 ERLLAMYICAGRGLEAERQLW-EMKLVGKEADGDLYDIVL-AICASQNEGSAVSRLL--S 400
LL +C G +E QLW ++ G + D +++I++ +C+ A+S L +
Sbjct: 237 YSLLMKGLCLGDKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMN 296
Query: 401 RIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRI 460
R +L + TL ++G+ K G+I +A ++L L P+ + L+GL
Sbjct: 297 RWNCAPNLVTQNTL---MQGFYKDGNIRNALVIWARILRNELQPDIISYNITLKGLCS-- 351
Query: 461 QQSGNVEAYLNLCKRLSDTSLI 482
C R+SD L
Sbjct: 352 ------------CNRISDAILF 361
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 17/235 (7%)
Query: 232 QQGG--PT----GYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSY--LIALTAVVKEL 283
QQ G PT + + GK +A+++V ++++ KP+V ++ LIA L
Sbjct: 46 QQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRL 105
Query: 284 NEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVV 343
+E + L +++ R+G A L N LI S A S + +Q ++
Sbjct: 106 DEAQQVLDEME---RSGFAANLVTYNT-LINGLSS---AGRSGEAVLVMQGMTTTPDTQT 158
Query: 344 HERLLAMYICAGRGLEAERQLWEMKL-VGKEADGDLYDIVL-AICASQNEGSAVSRLLSR 401
+ ++ + +G A L EMK G D Y I++ +C S N A L
Sbjct: 159 YNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEM 218
Query: 402 IEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
I + + L+ GY K ++ A E L+ ML+ G P+ + ++ GL
Sbjct: 219 IGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGL 273
>gi|30689969|ref|NP_197945.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|357528836|sp|Q8GZ63.2|PP397_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g25630
gi|332006092|gb|AED93475.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 574
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 53/122 (43%)
Query: 334 EGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGS 393
EG S +L+ + I GR EA+ + G Y +LA Q +
Sbjct: 38 EGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYG 97
Query: 394 AVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVL 453
++S ++S +E + + ++ + + G++ DA + L KM +LGL P ++
Sbjct: 98 SISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLI 157
Query: 454 QG 455
+G
Sbjct: 158 KG 159
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 332 IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL-AICASQN 390
I+E G VV+ LL Y AG+ +A L EMK V + + I++ + C ++
Sbjct: 295 IKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEK 354
Query: 391 EGSAVSRLLSRIEVMNSLCKKKTLSW--LLRGYIKGGHINDAAETLTKMLDLGLYPEYMD 448
A+ R+ + E+ S C+ +++ L+ G+ K G+ + A E L M+ G P +
Sbjct: 355 MDEAM-RIFT--EMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLS 411
Query: 449 RVAVLQGLRKR 459
+ ++ K+
Sbjct: 412 YLCIMMAHEKK 422
>gi|449518091|ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g23020-like [Cucumis sativus]
Length = 859
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 14/187 (7%)
Query: 260 LRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIA-ELDGKNLGLIEKYQS 318
+ E G++P+ + I + + K+ EF KA K + S+ E+ K K +S
Sbjct: 248 MNEQGMEPDEVTMGI-VVQLYKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKVES 306
Query: 319 DLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDL 378
L LS++ + L+ Y AG+ EA M G
Sbjct: 307 SLHPPHVSLSTY------------TYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVT 354
Query: 379 YDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKML 438
++ ++ IC + + V+ L+ ++E + +T + L+ Y K +I+ A+ +M
Sbjct: 355 FNTMIHICGNHGQLKEVTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEME 414
Query: 439 DLGLYPE 445
+ GL P+
Sbjct: 415 EAGLQPD 421
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 332 IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYD---IVLAICAS 388
I+E G VV+ LL Y AG+ ++A L EM+ KE + ++ ++ A+CA
Sbjct: 253 IREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRR--KECEPNVMSFTTLIQALCAK 310
Query: 389 QNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMD 448
+ A+ R+ ++ T + L+ G+ K G I+ E L M+ G P M
Sbjct: 311 KKMEEAM-RVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMT 369
Query: 449 RVAVLQGLRKR 459
+ ++ K+
Sbjct: 370 YLHIMAAHEKK 380
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 17/235 (7%)
Query: 232 QQGG--PT----GYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSY--LIALTAVVKEL 283
QQ G PT + + GK +A+++V ++++ KP+V ++ LIA L
Sbjct: 46 QQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRL 105
Query: 284 NEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVV 343
+E + L +++ R+G A L N LI S A S + +Q ++
Sbjct: 106 DEAQQVLDEME---RSGFAANLVTYNT-LINGLSS---AGRSGEAVLVMQGMTTTPDTQT 158
Query: 344 HERLLAMYICAGRGLEAERQLWEMKL-VGKEADGDLYDIVL-AICASQNEGSAVSRLLSR 401
+ ++ + +G A L EMK G D Y I++ +C S N A L
Sbjct: 159 YNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEM 218
Query: 402 IEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
I + + L+ GY K ++ A E L+ ML+ G P+ + ++ GL
Sbjct: 219 IGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGL 273
>gi|242049502|ref|XP_002462495.1| hypothetical protein SORBIDRAFT_02g026770 [Sorghum bicolor]
gi|241925872|gb|EER99016.1| hypothetical protein SORBIDRAFT_02g026770 [Sorghum bicolor]
Length = 294
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 413 TLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYL 470
T S L+ GY K G IN+ T+ML G+ P + RV +GL I SG V + +
Sbjct: 173 TYSTLVNGYCKIGRINEGLSLFTEMLHKGIEPSAISRVKEAKGLFASISGSGLVPSVV 230
>gi|449457361|ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Cucumis sativus]
Length = 858
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 14/187 (7%)
Query: 260 LRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIA-ELDGKNLGLIEKYQS 318
+ E G++P+ + I + + K+ EF KA K + S+ E+ K K +S
Sbjct: 247 MNEQGMEPDEVTMGIVVQ-LYKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKVES 305
Query: 319 DLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDL 378
L LS++ + L+ Y AG+ EA M G
Sbjct: 306 SLHPPHVSLSTY------------TYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVT 353
Query: 379 YDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKML 438
++ ++ IC + + V+ L+ ++E + +T + L+ Y K +I+ A+ +M
Sbjct: 354 FNTMIHICGNHGQLKEVTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEME 413
Query: 439 DLGLYPE 445
+ GL P+
Sbjct: 414 EAGLQPD 420
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 332 IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL-AICASQN 390
+ + G +L V + L++ AGR ++AER L EM G + D Y +V+ A C + +
Sbjct: 315 MSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGD 374
Query: 391 EGSAVSRLLSRIEVMNSLCKKK---TLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYM 447
V ++ M + K T + ++ G+ G + +A L ML++G+ P +
Sbjct: 375 ----VKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDI 430
Query: 448 DRVAVLQG 455
+L G
Sbjct: 431 TYNILLDG 438
>gi|297811525|ref|XP_002873646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319483|gb|EFH49905.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 634
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 347 LLAMYIC-AGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVM 405
L+ ++C AGR E L EMK G + D LY+ ++ C +L + V
Sbjct: 402 LMISFLCKAGRVREGYTALHEMKKKGLDPDVSLYNALIDACCRAEMIRPAKKLWDEMFVE 461
Query: 406 NSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGN 465
T + L+R + G ++ KML+ G+ P+ +++++GL K +
Sbjct: 462 GCKMNLTTYNVLIRKLSEEGEAEESLRLFQKMLEKGIEPDETIYMSLIEGLCKETKLEAA 521
Query: 466 VEAYLNLCKRLSDT 479
+E ++ +R + T
Sbjct: 522 LEVFIMCMERDNKT 535
>gi|26449475|dbj|BAC41864.1| unknown protein [Arabidopsis thaliana]
gi|29028966|gb|AAO64862.1| At5g25630 [Arabidopsis thaliana]
Length = 574
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 53/122 (43%)
Query: 334 EGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGS 393
EG S +L+ + I GR EA+ + G Y +LA Q +
Sbjct: 38 EGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYG 97
Query: 394 AVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVL 453
++S ++S +E + + ++ + + G++ DA + L KM +LGL P ++
Sbjct: 98 SISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLI 157
Query: 454 QG 455
+G
Sbjct: 158 KG 159
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 332 IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL-AICASQN 390
I+E G VV+ LL Y AG+ +A L EMK V + + I++ + C ++
Sbjct: 272 IKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEK 331
Query: 391 EGSAVSRLLSRIEVMNSLCKKKTLSW--LLRGYIKGGHINDAAETLTKMLDLGLYPEYMD 448
A+ R+ + E+ S C+ +++ L+ G+ K G+ + A E L M+ G P +
Sbjct: 332 MDEAM-RIFT--EMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLS 388
Query: 449 RVAVLQGLRKR 459
+ ++ K+
Sbjct: 389 YLCIMMAHEKK 399
>gi|296082318|emb|CBI21323.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 347 LLAMYIC-AGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVM 405
++ ++C AGR EA L EMK G + D Y+ ++ C ++ RL +
Sbjct: 403 VMVSFLCKAGRVREAYGVLQEMKKNGLDPDISSYNCLMEACCREDLLRPAKRLWDEMFAS 462
Query: 406 NSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
KT + L++ + + G I +A ML+ G+ P+ ++L+GL
Sbjct: 463 GYGVNLKTYNILIQKFSEIGQIQEAQWLFQHMLEKGVNPDATTYTSLLEGL 513
>gi|255548135|ref|XP_002515124.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545604|gb|EEF47108.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 898
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 151/385 (39%), Gaps = 56/385 (14%)
Query: 102 DILEEMNDRLSARELQLVLVYFSQEGRDSWCALEVFEWLKKENRVDNETMELMVSIMCSW 161
D++EE+ L+ VLV +++ + F+ L+ N +D + + S+ C+
Sbjct: 172 DVMEELGTNLNPHMYDSVLVALTRKNQIGLALSIFFKLLETSNDID-IGVSVPGSVACNT 230
Query: 162 V-------------KKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKE 208
+ KK ++ +G+G +D C+ +S + + L+ EM++K
Sbjct: 231 LLVALRKADMRVEFKKVFDKLKGMGFELDTWGYNICIHAFGCWSDLGTALRLFKEMKEK- 289
Query: 209 RAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPE 268
S+G D L + GK DA+ + L+ SG +P+
Sbjct: 290 ----------SKGFGSCCPDLCTYNS-----LIRLLCFSGKVKDALVVYEELKISGHEPD 334
Query: 269 VYSYLIALTAVVKE--LNEFGKALRKLK--GYVRAGSIAE--LDG--KNLGLIEKYQ--S 318
++Y I + K +N+ K +++ G+V ++ LDG K + E Q
Sbjct: 335 AFTYRIIIEGCSKSYRMNDATKIFSEMQYNGFVPDTTVYNSLLDGMFKARKVTEACQLFE 394
Query: 319 DLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDL 378
++ DG R SSW Y ++ + L GR ++K GK D
Sbjct: 395 KMVQDGVRASSWT--------YNILIDGLCK----NGRSAAGYSLFCDLKKKGKFVDAIT 442
Query: 379 YDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKML 438
Y I++ + + + L+ +E + T++ LL + K G + + + +
Sbjct: 443 YSIIVLLLCREGQLKEALSLVEEMEERGFVVDLVTITSLLIAFHKQGRWDWTEKLMKHVR 502
Query: 439 DLGLYPEYM----DRVAVLQGLRKR 459
D L P + D A L+ R R
Sbjct: 503 DGNLVPNVLNWQADMEASLKNPRSR 527
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 130/309 (42%), Gaps = 39/309 (12%)
Query: 182 MDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLA 241
M+ GL+P VI + EM+ ++A +VK ++ +GIA P+
Sbjct: 303 MESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIA------------PS-VET 349
Query: 242 WKMMVEGK-----YVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRK---L 293
+ ++++G + +++ + E+G KP V SY + + K+ GK L L
Sbjct: 350 YNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKD----GKILEAEMVL 405
Query: 294 KGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEG-GSSLYGVVHERLLAMYI 352
+ V G + + N+ + L + R + G G+++ V + L+
Sbjct: 406 RDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATI--VTYNSLIKGLC 463
Query: 353 CAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKK 412
G+ EAE + + G D Y+ +++ N G++ + L E M L K
Sbjct: 464 KMGKLKEAEEMFFLITSTGHCPDVITYNSLIS--GYSNAGNS-QKCLELYETMKKLGLKP 520
Query: 413 TLSW---LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAY 469
T++ L+ G K G I +ML + L P DRV V + Q++G+V+
Sbjct: 521 TINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSP---DRV-VYNAMIHCYQETGHVQKA 575
Query: 470 LNLCKRLSD 478
+L K + D
Sbjct: 576 FSLQKEMVD 584
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 38/235 (16%)
Query: 253 AIKLVIHLRESGLKPEVYSY--LIALTAVVKELNEFGKALRKLKG--------------- 295
A++L+ +R++GL+P+ +Y LI+ + L++ ++
Sbjct: 117 ALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVS 176
Query: 296 -YVRAGSIAELDGKNLGLIEK-YQSDLLADGSRLSSWA--------------IQEGGSSL 339
+ R G E + L+EK +Q D + S L ++A + + G
Sbjct: 177 VHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRK 236
Query: 340 YGVVHERLLAMYICAGRGLEAERQLW-EMKLVGKEADGDLYDIVLAICASQNEGSAVSRL 398
G+ + ++ MY GR L+ L+ EM+ +G D Y +++ + S ++
Sbjct: 237 DGITYNTMIHMYGKMGR-LDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKV 295
Query: 399 LSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVL 453
L + T S L+ Y K G +DA T +M++ G+ P DR+A L
Sbjct: 296 LEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKP---DRLAYL 347
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 89/215 (41%), Gaps = 19/215 (8%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
GK +A + L+E GL P ++Y ++ K+ N KA + L+ G ++
Sbjct: 604 NGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGN-VDKASQLLEEMCIKGINPDIV 662
Query: 307 GKNL--------GLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGL 358
N+ G IE+ + +L D I+ G + V + ++ Y +
Sbjct: 663 TYNILIDGLCKAGEIERAK-NLFDD--------IEGRGLTPNCVTYAAMVDGYCKSKNPT 713
Query: 359 EAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLL 418
A + L EM L G D +Y+++L C + + L + + + + L+
Sbjct: 714 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM-LEKGFASTVSFNTLI 772
Query: 419 RGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVL 453
GY K G + +A L +M++ P ++ +++
Sbjct: 773 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLI 807
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 89/211 (42%), Gaps = 2/211 (0%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
GK+ A+++V ++ G KP +++Y L + + +F +ALR L G + ++
Sbjct: 58 GKWEAALEVVAEMQAKGCKPNLWTY-NTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRT 116
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEM 367
N + ++ L++ L + ++E G + L+ GR +A L EM
Sbjct: 117 YNCLISTLGKAGRLSEAFTLFA-EMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEM 175
Query: 368 KLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHI 427
+ G D Y ++ E +L ++ T + L+ K G +
Sbjct: 176 ERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRV 235
Query: 428 NDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
+DA E L +M + G+ P + A++ G K
Sbjct: 236 DDALELLDEMKERGVKPGVVTYNALIAGFGK 266
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 89/240 (37%), Gaps = 37/240 (15%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTA------------VVKELNEFGKALRKLKG 295
G+ A L+ +L + G +VY+Y +TA V K++ E G +
Sbjct: 179 GRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITY 238
Query: 296 YVRAGSIAELD---GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYI 352
V ++ K +GL+++ +S +A S + I
Sbjct: 239 NVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLIS------------------- 279
Query: 353 CAGRGL---EAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLC 409
C RG EA L EMKL G D Y+ +L + +L +E
Sbjct: 280 CCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPP 339
Query: 410 KKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAY 469
T + L+ Y + G + DA E +M++ G+ P+ +L G K + V+ +
Sbjct: 340 SIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIF 399
>gi|449434442|ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Cucumis sativus]
Length = 464
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 12/228 (5%)
Query: 237 TGYLAWKMMVEGKYVD-AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKG 295
T LA + + VD A++LV L + P++Y+Y +VK+L + +AL +
Sbjct: 162 TADLAVRSLCSVGLVDEAVELVKELSQKHTPPDIYTY----NHLVKQLCK-SRALSTVYN 216
Query: 296 YV-----RAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAM 350
++ G+ +L + + S+ L + RL S +EG V+ ++
Sbjct: 217 FIVEMRSSCGAKPDLVTYTILIDNVCNSNNLREAMRLVSLLYKEGFKP-DCFVYNTIMKG 275
Query: 351 YICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCK 410
Y GRG EA +MK VG E D ++ ++ + L + M
Sbjct: 276 YCMVGRGAEAIGVYKKMKEVGLEPDVVTFNTLIFGLSKSGRVKEARNFLDIMAEMGHFPD 335
Query: 411 KKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
T + L+ G + G+ A L +M G P +L GL K
Sbjct: 336 AVTYTSLMNGMCREGNALGALSLLKEMEAKGCNPNSCTYNTLLHGLSK 383
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%)
Query: 355 GRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
GR +E +R + ++ +G D Y+ ++ S+LL + + +
Sbjct: 149 GRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSY 208
Query: 415 SWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNL 472
+ LL GY K G I+ A KML G+ P + +L GL + + S E YLN+
Sbjct: 209 NTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM 266
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 16/237 (6%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G+ +A+ + ++E G+ PE YSY ++ +K + F +AL +L ++ A +
Sbjct: 360 GRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKA-DMFDRAL-ELFNHMNACGPSPNGY 417
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLA---MYICAGRGL--EAER 362
++ I Y G L + E S G+V + A +Y AG G A+R
Sbjct: 418 THVLFINYYGKS----GQSLKAIQRYEHMKS-KGIVPDVAAANAVLYSLAGSGRLGMAKR 472
Query: 363 QLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYI 422
+E+K +G D Y +++ C+ ++ S + + L+ L+
Sbjct: 473 VFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLY 532
Query: 423 KGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDT 479
KGG N+A + K+ ++ + P +L GL + G V+ + L + ++ T
Sbjct: 533 KGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGRE----GKVKEVMQLLEEMTRT 585
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 17/138 (12%)
Query: 364 LWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIK 423
L +M VG + D LY ++A QN +L + + K+T + ++ GY +
Sbjct: 1100 LNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCR 1159
Query: 424 GGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSL-- 481
++ A + KM D G P+ + A++ GL K E+ L+ ++L DT +
Sbjct: 1160 EKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCK--------ESRLDEARQLYDTMIDK 1211
Query: 482 -IGPC------LVYLYIK 492
+ PC L Y Y K
Sbjct: 1212 GLSPCEVTRVTLTYEYCK 1229
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%)
Query: 355 GRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
GR +E +R + ++ +G D Y+ ++ S+LL + + +
Sbjct: 497 GRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSY 556
Query: 415 SWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNL 472
+ LL GY K G I+ A KML G+ P + +L GL + + S E YLN+
Sbjct: 557 NTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM 614
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 107/227 (47%), Gaps = 31/227 (13%)
Query: 243 KMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFG--KALRKLKGYVR-A 299
+++ G+ + + + ++ G P+V IA TA+++E + G K ++ G + +
Sbjct: 88 RLIRNGELEEGSRFLEYMTNKGKSPDV----IACTALIREFCKIGRTKNASQIMGILEES 143
Query: 300 GSIAELDGKNLGLIEKY-QSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGL 358
G++ ++ N+ LI Y +S + + R+ + G S ++ +L G+
Sbjct: 144 GAVIDVTSYNV-LISGYCKSGEIEEALRV----LDRMGVSPNAATYDAVLCSLCDRGKLK 198
Query: 359 EAERQLWEMKLVGKEADGDLY-DIVL------AICASQNEGSAVSRLLSRIEVMNSLCKK 411
+A M+++G++ Y D+V A C G A+ +L + E+ N CK
Sbjct: 199 QA------MQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAM-KLFN--EMRNKGCKP 249
Query: 412 KTLSW--LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
+++ L++G+ KGG +++A L K+ G P+ + +L+ L
Sbjct: 250 DVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSL 296
>gi|449508786|ref|XP_004163411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Cucumis sativus]
Length = 464
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 12/228 (5%)
Query: 237 TGYLAWKMMVEGKYVD-AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKG 295
T LA + + VD A++LV L + P++Y+Y +VK+L + +AL +
Sbjct: 162 TADLAVRSLCSVGLVDEAVELVKELSQKHTPPDIYTY----NHLVKQLCK-SRALSTVYN 216
Query: 296 YV-----RAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAM 350
++ G+ +L + + S+ L + RL S +EG V+ ++
Sbjct: 217 FIVEMRSSCGAKPDLVTYTILIDNVCNSNNLREAMRLVSLLYKEGFKP-DCFVYNTIMKG 275
Query: 351 YICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCK 410
Y GRG EA +MK VG E D ++ ++ + L + M
Sbjct: 276 YCMVGRGAEAIGVYKKMKEVGLEPDVVTFNTLIFGLSKSGRVKEARNFLDIMAEMGHFPD 335
Query: 411 KKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
T + L+ G + G+ A L +M G P +L GL K
Sbjct: 336 AVTYTSLMNGMCREGNALGALSLLKEMEAKGCNPNSCTYNTLLHGLSK 383
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 38/235 (16%)
Query: 253 AIKLVIHLRESGLKPEVYSY--LIALTAVVKELNEFGKALRKLKG--------------- 295
A++L+ +R++GL+P+ +Y LI+ + L++ ++
Sbjct: 277 ALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVS 336
Query: 296 -YVRAGSIAELDGKNLGLIEK-YQSDLLADGSRLSSWA--------------IQEGGSSL 339
+ R G E + L+EK +Q D + S L ++A + + G
Sbjct: 337 VHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRK 396
Query: 340 YGVVHERLLAMYICAGRGLEAERQLW-EMKLVGKEADGDLYDIVLAICASQNEGSAVSRL 398
G+ + ++ MY GR L+ L+ EM+ +G D Y +++ + S ++
Sbjct: 397 DGITYNTMIHMYGKMGR-LDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKV 455
Query: 399 LSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVL 453
L + T S L+ Y K G +DA T +M++ G+ P DR+A L
Sbjct: 456 LEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKP---DRLAYL 507
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 174 DVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQ 233
+ V LL +M+ G++P I +++ + R ++A SRGI + +
Sbjct: 311 EAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGI---DLNTVAYN 367
Query: 234 GGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALR 291
G YL++ G Y A++L +RES +KP+ +Y I ++ K L ++ ++LR
Sbjct: 368 SGIKSYLSF-----GDYEKALELYTSMRESNVKPDAVTYNILISGSSK-LGKYTESLR 419
>gi|242034145|ref|XP_002464467.1| hypothetical protein SORBIDRAFT_01g018940 [Sorghum bicolor]
gi|241918321|gb|EER91465.1| hypothetical protein SORBIDRAFT_01g018940 [Sorghum bicolor]
Length = 440
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 21/185 (11%)
Query: 293 LKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYI 352
L ++RAG + E+ + L E SS + G +S ++H + +
Sbjct: 167 LSAFLRAGRLDEIKS-TITLAE-------------SSHGVAPGRASHNVLLHALVKNSEL 212
Query: 353 CAGRGLEAERQLWEMKLVGKEA-DGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKK 411
A R L E + KL + A D Y+ VLA C+ Q++ +LL I + N
Sbjct: 213 AAARKLLDE--MANKKLKHRPAPDIISYNTVLAGCSVQDDEEGFEKLLKEISLSNLEPNV 270
Query: 412 KTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLN 471
T + ++ + K G E L M G+ P Y+ A++QG K GNV A
Sbjct: 271 VTYNCRIQWFSKKGETVKGEELLDVMESKGVAPNYLTYNALVQGYCKE----GNVGAATR 326
Query: 472 LCKRL 476
+ KR+
Sbjct: 327 VFKRM 331
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 21/216 (9%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
GK +A + L+E GL P ++Y ++ K+ N KA + L+ G ++
Sbjct: 613 NGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGN-VDKASQLLEEMCIKGINPDIV 671
Query: 307 GKNL--------GLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGL 358
N+ G IE+ + +L D I+ G + V + ++ Y C +
Sbjct: 672 TYNILIDGLCKAGEIERAK-NLFDD--------IEGRGLTPNCVTYAAMVDGY-CKSKNP 721
Query: 359 EAERQLWE-MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWL 417
A QL E M L G D +Y+++L C + + L + + + + L
Sbjct: 722 TAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM-LEKGFASTVSFNTL 780
Query: 418 LRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVL 453
+ GY K G + +A L +M++ P ++ +++
Sbjct: 781 IEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLI 816
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 12/225 (5%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G DA+ +V + E G P+VY+Y ++ + K L EF KA+ L+ +
Sbjct: 277 GNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCK-LGEFEKAIEILQQMILRECSPNTVT 335
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE- 366
N + + + + + L+ + +G L V L +C + + +++E
Sbjct: 336 YNTLISALCKENEIEAATDLARILVSKG--LLPDVCTFNTLIQGLCLSKNQDIAMEMFEE 393
Query: 367 MKLVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLRGYIK 423
MK G + D Y I++ ++C + A+ LL +E +S C + + + L+ G K
Sbjct: 394 MKNKGCKPDEFTYSILIDSLCYERRLKEAL-MLLKEME--SSGCARNAVVYNTLIDGLCK 450
Query: 424 GGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL--RKRIQQSGNV 466
I DA E +M LG+ + ++ GL KR++++ +
Sbjct: 451 SRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQL 495
>gi|255583549|ref|XP_002532531.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527743|gb|EEF29847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 212
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
Query: 355 GRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
G+ ++AER L EM G + D Y +V+ + + +LL ++ + T
Sbjct: 69 GKVIDAERALREMLKAGFKPDDATYTMVMDGFCKKGDMKTGFKLLKEMQSDGHVPGVVTY 128
Query: 415 SWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNL 472
+ L+ GY K + +A L M++LG+ P+ + +L+G K GN++ + L
Sbjct: 129 NVLMNGYCKQSQMKNANMLLDAMMNLGVVPDDITYNILLEGHCKH----GNLQDFHKL 182
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 103/256 (40%), Gaps = 48/256 (18%)
Query: 240 LAWKMMVEGKYVD-----AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKAL---R 291
++W +V G + A+++V+ ++E+G KP+ + L+++ V +L KAL R
Sbjct: 209 VSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSIT-LVSVLPAVADL----KALRIGR 263
Query: 292 KLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMY 351
+ GY + +++ Y GS S+ + +G SS V ++ Y
Sbjct: 264 SIHGYAFRAGFEYMVNVATAMLDTY----FKCGSVRSARLVFKGMSSRNVVSWNTMIDGY 319
Query: 352 ICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNE---GSAVSRLLSR------I 402
G EA +M G E L CA+ + G V RLL +
Sbjct: 320 AQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDV 379
Query: 403 EVMNSL------CK--------------KKTLSW--LLRGYIKGGHINDAAETLTKMLDL 440
VMNSL CK K ++W ++ GY + G +N+A +M
Sbjct: 380 SVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSH 439
Query: 441 GLYPEYMDRVAVLQGL 456
+ P+ V+V+ L
Sbjct: 440 DIKPDSFTLVSVITAL 455
>gi|296090648|emb|CBI41047.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 332 IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYD---IVLAICAS 388
I+E G VV+ LL Y AG+ ++A L EM+ KE + ++ ++ A+CA
Sbjct: 145 IREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMR--RKECEPNVMSFTTLIQALCAK 202
Query: 389 QNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMD 448
+ A+ R+ ++ T + L+ G+ K G I+ E L M+ G P M
Sbjct: 203 KKMEEAM-RVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMT 261
Query: 449 RVAVLQGLRKR 459
+ ++ K+
Sbjct: 262 YLHIMAAHEKK 272
>gi|297736068|emb|CBI24106.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 79 EDEMSEEFFEAIEELERMTREPSDILEEMNDRLSARELQLVLVYFSQEGRDSWCALEVFE 138
E +++EE F EE +++ R+P L +LVL+Y + + +E+ +
Sbjct: 233 EVKVAEELFREAEE-KKILRDPEVFL------------KLVLMYVEEGLMER--TIEIVK 277
Query: 139 WLKKENRVDNETMELMVSIMCSWVKKYIEEE--RGVGDVVDLLVDMDCVGLKPGFSMIEK 196
+K N + + I C+ V + ++ R V D L+ C +PG
Sbjct: 278 AMK------NVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGC---EPGQVTYAS 328
Query: 197 VISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMV--EGKYVDAI 254
+I++Y ME L+ KA + ++E + +G Y + +M G+ +A+
Sbjct: 329 IINVYCRME------LYSKA----EMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAM 378
Query: 255 KLVIHLRESGLKPEVYSY--LIALTAVVKELNEFGKALRKLK 294
+LV ++E G KP V+ Y L+ + VK L + K +++K
Sbjct: 379 RLVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMK 420
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Query: 355 GRGLEAERQLWEMKLVGKEADGDLYDI-VLAICASQNEGSAVSRLLSRIEVMNSLCKKKT 413
G LEAE+ + K G E D + Y I V +C N G A+S LL + + + T
Sbjct: 172 GNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALS-LLREMRAAGWIPPEGT 230
Query: 414 LSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLC 473
+ ++ +K G++ +A M++ G + M+ +AV L K GN+ + L L
Sbjct: 231 FTSVITACVKEGNVAEALRLKDDMVNCG---KSMN-LAVATSLMKGYCMQGNLRSALVLV 286
Query: 474 KRLSDTSLIGPCLVY 488
+S++ L+ + Y
Sbjct: 287 NEISESGLVPNKVTY 301
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 21/243 (8%)
Query: 260 LRESGLKPEVYSYLIALTAVVK-ELNEFGKALRKLKGYVRAG--SIAELDGKNLGLIEKY 316
L SG+ P +++ I L++ + E+ + G+ + V+ G SI+ +G +G+ K
Sbjct: 151 LWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHC--NVVKMGFESISYCEGALIGMYAK- 207
Query: 317 QSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADG 376
+ L D +I +G L V ++ YI G EA + EM+ VG+E D
Sbjct: 208 -CNFLTDAR-----SIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQ 261
Query: 377 DLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLRGYIKGGHINDAAETL 434
+ V+ N + RL + ++ + + + ++W ++ G+ KGG+ +A E
Sbjct: 262 VAFVTVI------NAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFF 315
Query: 435 TKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKR-LSDTSLIGPCLVYLYIKK 493
M G+ +VL + + + K+ L +G LV +Y K
Sbjct: 316 QNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKC 375
Query: 494 YKL 496
K+
Sbjct: 376 GKM 378
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Query: 355 GRGLEAERQLWEMKLVGKEADGDLYDI-VLAICASQNEGSAVSRLLSRIEVMNSLCKKKT 413
G LEAE+ + K G E D + Y I V +C N G A+S LL + + + T
Sbjct: 54 GNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALS-LLREMRAAGWIPPEGT 112
Query: 414 LSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLC 473
+ ++ +K G++ +A M++ G + M+ +AV L K GN+ + L L
Sbjct: 113 FTSVITACVKEGNVAEALRLKDDMVNCG---KSMN-LAVATSLMKGYCMQGNLRSALVLV 168
Query: 474 KRLSDTSLIGPCLVY 488
+S++ L+ + Y
Sbjct: 169 NEISESGLVPNKVTY 183
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 99/248 (39%), Gaps = 41/248 (16%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G+ +A+ + + E +P V++Y + + ++ ++ N F A + L G + G I +
Sbjct: 323 GRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSN-FDDAKKILNGMLEKGLIPSVVT 381
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEM 367
N LI+ Y L+ S L ++ E + L + C G+ + L
Sbjct: 382 YN-ALIDGYCKKGLS-ASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHK 439
Query: 368 KLVGK-EADGDLYDIVL-AICASQNEGSAVSRLLSRIE-------------VMNSLCKKK 412
L K + + Y+I++ C + GSA +LLS + +++LCK+
Sbjct: 440 MLERKLQPNVVTYNILIHGQCKEGDLGSAY-KLLSLMNESGLVPDEWTYSVFIDTLCKRG 498
Query: 413 TL----------------------SWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRV 450
+ S L+ GY K G ++D L KML G P +
Sbjct: 499 LVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYN 558
Query: 451 AVLQGLRK 458
+++ G K
Sbjct: 559 SLIDGYCK 566
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 111/290 (38%), Gaps = 20/290 (6%)
Query: 186 GLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMM 245
GLKP V++ + + E A ++ G+A DG GY
Sbjct: 222 GLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLA---PDGVSYNTLVGGYCKV--- 275
Query: 246 VEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAEL 305
G +A+ + + G+ P+V ++ + + K N L + G VR L
Sbjct: 276 --GCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGN-----LERAVGLVREMRERGL 328
Query: 306 DGKNL---GLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAER 362
+ LI+ + D + L+ +++ V + L+ Y GR EA
Sbjct: 329 QMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARE 388
Query: 363 QLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYI 422
+ EM+ G + D Y +L+ + + +L ++ L T S L+R
Sbjct: 389 LVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLC 448
Query: 423 KGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNL 472
+ + DA M+ LGL P+ + +++ G K GNVE L+L
Sbjct: 449 EEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKE----GNVERALSL 494
>gi|225425981|ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 603
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 44/224 (19%)
Query: 79 EDEMSEEFFEAIEELERMTREPSDILEEMNDRLSARELQLVLVYFSQEGRDSWCALEVFE 138
E +++EE F EE +++ R+P L +LVL+Y + + LE+ +
Sbjct: 309 EVKVAEELFREAEE-KKILRDPEVFL------------KLVLMYVEEGLMER--TLEIVK 353
Query: 139 WLKKENRVDNETMELMVS--IMCSWVKKYIEEE--RGVGDVVDLLVDMDCVGLKPGFSMI 194
+K +E+ VS I C+ V + ++ R V D L+ C +PG
Sbjct: 354 AMK--------NVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGC---EPGQVTY 402
Query: 195 EKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMV--EGKYVD 252
+I++Y ME L+ KA + ++E + +G Y + +M G+ +
Sbjct: 403 ASIINVYCRME------LYSKA----EMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLRE 452
Query: 253 AIKLVIHLRESGLKPEVYSY--LIALTAVVKELNEFGKALRKLK 294
A++LV ++E G +P V+ Y L+ + VK L + K +++K
Sbjct: 453 AMRLVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMK 496
>gi|356498877|ref|XP_003518274.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g09900-like [Glycine max]
Length = 395
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 14/217 (6%)
Query: 157 IMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKA 216
+ C+ + +E GVG + LL++M G KP +I + + A+ F+K
Sbjct: 32 VTCTELIDAACKESGVGQAMKLLIEMMSKGCKPNVVTYNVLIKGICNEGRLDEAIRFLKN 91
Query: 217 VLSRGIAYAEGDGEGQQGGPTGY--LAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLI 274
+ S I Q Y + + GK++DA+KL+ + +G P V ++
Sbjct: 92 LPSYSI----------QLDVISYTIILHSLCSGGKWMDAMKLLASMLRNGFSPNVVTFNT 141
Query: 275 ALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQE 334
+ + + GKAL L+ + G N LIE + ++ AD + S +
Sbjct: 142 LINFLCLK-GLLGKALNVLEMMPKHGCTPNFRSYN-PLIEGFCNEKSADRTIEYSRIMVS 199
Query: 335 GGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVG 371
G L V + LL G+ +A L ++ L G
Sbjct: 200 RGCYLDTVTYNILLTALCKDGKVDDAIEILNQLSLNG 236
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 120/291 (41%), Gaps = 33/291 (11%)
Query: 194 IEKVISLYWEMEKKERAV--LFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYV 251
+++ I+L+ E+ K + +KA+LS G + P + + MV G V
Sbjct: 240 LDEAIALFRELPDKNVCSHNILLKALLSAGRLKDACQHFDEMSSPPDVVTYGTMVHGYCV 299
Query: 252 -----DAIKLVIHLRESGLKPE--VYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAE 304
+A+KL+ + GL+ VY+ +IAL ++++ ALR L+ G
Sbjct: 300 RGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSD---ALRVLEDMTMHG--VA 354
Query: 305 LDGKNLG-LIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQ 363
LD +I + S +R +Q+ G + V H L+ AG EA+R
Sbjct: 355 LDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRV 414
Query: 364 LWEMKLVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNSLCKKK------TLSW 416
L EM G + D Y +++ C N ++ V N + ++ T +
Sbjct: 415 LQEMVDKGLDVDVVTYTVLIDGYCKRGN-------MVEAFRVHNEMVGRRVAPNVVTYTA 467
Query: 417 LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVE 467
L G K G + A E L +M + GL +++ GL K GN+E
Sbjct: 468 LSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCK----FGNLE 514
>gi|255570402|ref|XP_002526160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534537|gb|EEF36236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 762
Score = 38.5 bits (88), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 260 LRESGLKPEVYSYLIALTAVVK-ELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQS 318
L G+ P +++ I L+ + + EFG+ + V+ G E +G +
Sbjct: 9 LWSHGMWPNEFTFAIVLSGCARLDSVEFGRLVHC--NVVKLG--FEFSSFCVGAL----I 60
Query: 319 DLLADGSRLSSWA-IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGD 377
D+ A +R+S + +GG SL V L+A Y+ AG EA +MK VG+E D
Sbjct: 61 DMYAKNNRMSDCRRVFDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQV 120
Query: 378 LYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSW--LLRGYIKGGHINDAAETLT 435
+ V+ N A+ RL + + + ++W ++ G+ + GH + E
Sbjct: 121 AFVTVI------NAYVALGRLDDALGLFFQMPNPNVVAWNVMISGHAQRGHETKSIELFC 174
Query: 436 KMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSL-IGPCLVYLYIK 492
M G+ +VL + + + K+ D+++ +G L+ +Y K
Sbjct: 175 NMRKAGIKSTRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMYAK 232
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 38/235 (16%)
Query: 253 AIKLVIHLRESGLKPEVYSY--LIALTAVVKELNEFGKALRKLKG--------------- 295
A++L+ +R++GL+P+ +Y LI+ + L++ ++
Sbjct: 50 ALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVS 109
Query: 296 -YVRAGSIAELDGKNLGLIEK-YQSDLLADGSRLSSWA--------------IQEGGSSL 339
+ R G E + L+EK +Q D + S L ++A + + G
Sbjct: 110 VHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRK 169
Query: 340 YGVVHERLLAMYICAGRGLEAERQLW-EMKLVGKEADGDLYDIVLAICASQNEGSAVSRL 398
G+ + ++ MY GR L+ L+ EM+ +G D Y +++ + S ++
Sbjct: 170 DGITYNTMIHMYGKMGR-LDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKV 228
Query: 399 LSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVL 453
L + T S L+ Y K G +DA T +M++ G+ P DR+A L
Sbjct: 229 LEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKP---DRLAYL 280
>gi|388516039|gb|AFK46081.1| unknown [Lotus japonicus]
Length = 327
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 28/166 (16%)
Query: 171 GVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRG-----IAYA 225
GV DV+ LL +M GL+P + V+ +RA F++ + ++G I+Y+
Sbjct: 40 GVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFIRYISAKGYAPDVISYS 99
Query: 226 ---EG--------DGEG------QQGGPTGYLAWKMMV-----EGKYVDAIKLVIHLRES 263
G DGE +G + + +++ +GK +A+ L+ ++E
Sbjct: 100 ILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEAVSLLKVMKEQ 159
Query: 264 GLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKN 309
GL P+ YSY + A KE + A+ L+ + G + ++ N
Sbjct: 160 GLTPDAYSYDPLIAAFCKE-SRVDLAIEFLESMISDGCLPDIVNYN 204
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,979,775,610
Number of Sequences: 23463169
Number of extensions: 336043026
Number of successful extensions: 934906
Number of sequences better than 100.0: 561
Number of HSP's better than 100.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 449
Number of HSP's that attempted gapping in prelim test: 932785
Number of HSP's gapped (non-prelim): 2298
length of query: 502
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 355
effective length of database: 8,910,109,524
effective search space: 3163088881020
effective search space used: 3163088881020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)