BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010739
(502 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WNN7|PP176_ARATH Pentatricopeptide repeat-containing protein At2g30100,
chloroplastic OS=Arabidopsis thaliana GN=At2g30100 PE=2
SV=2
Length = 503
Score = 598 bits (1543), Expect = e-170, Method: Compositional matrix adjust.
Identities = 313/492 (63%), Positives = 380/492 (77%), Gaps = 20/492 (4%)
Query: 23 LVPQLHGSCLTRPPPRISTRIK-NYQNPSFIATKVSKIREFRFLKSVELDQFVTSDDEDE 81
+P+LH + +P RI +K NY K RE +SVELDQF+TS++E+
Sbjct: 20 FLPRLHRNHSVKPNSRIICNLKLNYS--------AGKFREMGLSRSVELDQFITSEEEEG 71
Query: 82 MSEE----FFEAIEELERMTREPSDILEEMNDRLSARELQLVLVYFSQEGRDSWCALEVF 137
+EE FFEAIEELERMTREPSDILEEMN RLS+RELQL+LVYF+QEGRDSWC LEVF
Sbjct: 72 EAEEIGEGFFEAIEELERMTREPSDILEEMNHRLSSRELQLMLVYFAQEGRDSWCTLEVF 131
Query: 138 EWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKV 197
EWLKKENRVD E MELMVSIMC WVKK IE+E V DLL++MDCVGLKPGFSM++KV
Sbjct: 132 EWLKKENRVDEEIMELMVSIMCGWVKKLIEDECNAHQVFDLLIEMDCVGLKPGFSMMDKV 191
Query: 198 ISLYWEMEKKERAVLFVKAVLSR-----GIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVD 252
I+LY EM KKE AVLFVK VL R G EG++GGP GYLAWK MV+G Y
Sbjct: 192 IALYCEMGKKESAVLFVKEVLRRRDGFGYSVVGGGGSEGRKGGPVGYLAWKFMVDGDYRK 251
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGL 312
A+ +V+ LR SGLKPE YSYLIA+TA+VKELN GK LR+LK + RAG +AE+D + L
Sbjct: 252 AVDMVMELRLSGLKPEAYSYLIAMTAIVKELNSLGKTLRELKRFARAGFVAEIDDHDRVL 311
Query: 313 IEKYQSDLLADGSRLSSWAIQEG--GSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLV 370
IEKYQS+ L+ G +L++WA++EG S+ GVVHERLLAMYICAGRG EAE+QLW+MKL
Sbjct: 312 IEKYQSETLSRGLQLATWAVEEGQENDSIIGVVHERLLAMYICAGRGPEAEKQLWKMKLA 371
Query: 371 GKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDA 430
G+E + DL+DIV+AICASQ E +AVSRLL+R+E M S KKKTLSWLLRGY+KGGH +A
Sbjct: 372 GREPEADLHDIVMAICASQKEVNAVSRLLTRVEFMGSQRKKKTLSWLLRGYVKGGHFEEA 431
Query: 431 AETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGPCLVYLY 490
AETL M+D GL+PEY+DRVAV+QG+ ++IQ+ +VEAY++LCKRL D L+GPCLVY+Y
Sbjct: 432 AETLVSMIDSGLHPEYIDRVAVMQGMTRKIQRPRDVEAYMSLCKRLFDAGLVGPCLVYMY 491
Query: 491 IKKYKLWIIKML 502
I KYKLWI+KM+
Sbjct: 492 IDKYKLWIVKMM 503
>sp|Q0WVV0|PPR31_ARATH Pentatricopeptide repeat-containing protein At1g10910,
chloroplastic OS=Arabidopsis thaliana GN=At1g10910 PE=2
SV=1
Length = 664
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 36/212 (16%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
GK IKL ++ GLKP+V +Y L +K N + KA+ EL
Sbjct: 179 NGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAI-------------ELI 225
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
G +L +G ++ S +YG V LA+ GR EAE + +
Sbjct: 226 G-----------ELPHNGIQMDSV--------MYGTV----LAICASNGRSEEAENFIQQ 262
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
MK+ G + Y +L + + + L++ ++ + + K ++ LL+ YIKGG
Sbjct: 263 MKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGL 322
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
+ + E L+++ G M ++ GL K
Sbjct: 323 FDRSRELLSELESAGYAENEMPYCMLMDGLSK 354
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKE--LNEFGKALRKLKGYVRAGSIAEL 305
GK +A+ L ++ G P+VY+Y ++ +VK +NE LRK++ G A++
Sbjct: 493 GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME---ENGCRADI 549
Query: 306 DGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW 365
+ N+ ++ + + + I+ G GV + LL + AG EA R +
Sbjct: 550 NSHNI-ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMR 608
Query: 366 EMKLVGKEADGDLYDIVL 383
EMK G E D Y +L
Sbjct: 609 EMKDKGFEYDAITYSSIL 626
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 141/350 (40%), Gaps = 39/350 (11%)
Query: 118 LVLVYFSQEGRD-SWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVV 176
L+ VY +Q RD + AL+VF L + ++T +I+ + + + E ++
Sbjct: 207 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTT---CNILLTSLVRANEFQKCCE--- 260
Query: 177 DLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGP 236
D+ C G+ P + I+ + + K E AV + G+A
Sbjct: 261 --AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVA------------- 305
Query: 237 TGYLAWKMMVE-----GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALR 291
+ + +++ G+Y +A + E G++P + +Y I + + + G A
Sbjct: 306 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRA-KRIGDAYF 364
Query: 292 KLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQE----GGSSLYGVVHERL 347
LK + G + N LI+ + + GS + I++ G SL + L
Sbjct: 365 VLKEMTKKGFPPNVIVYN-NLIDSF----IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 419
Query: 348 LAMYICAGRGLEAERQLWEMKLVGKEAD-GDLYDIVLAICASQNEGSAVSRLLSRIEVMN 406
+ Y G+ AER L EM +G + G ++ +C+ SA+ R + + + N
Sbjct: 420 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL-RFVGEMLLRN 478
Query: 407 SLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
L+ L+ G K G + A E + L+ G + A+L GL
Sbjct: 479 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 528
Score = 35.8 bits (81), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 140/352 (39%), Gaps = 50/352 (14%)
Query: 133 ALEV-FEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGF 191
ALE+ F++L K VD T ++ +C K E R +++ MD V
Sbjct: 502 ALELWFQFLNKGFVVDTRTSNALLHGLCE-AGKLDEAFRIQKEILGRGCVMDRVSY---- 556
Query: 192 SMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEG--- 248
+IS +K + A +F+ ++ RG+ P Y + +++ G
Sbjct: 557 ---NTLISGCCGKKKLDEAFMFLDEMVKRGLK------------PDNY-TYSILICGLFN 600
Query: 249 --KYVDAIKLVIHLRESGLKPEVYSYLIALTAVVK-ELNEFGKALRKLKGYVRAGSIAEL 305
K +AI+ + +G+ P+VY+Y + + K E E G+ E+
Sbjct: 601 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF-----------FDEM 649
Query: 306 DGKNL---GLIEKYQSDLLADGSRLSSWA-----IQEGGSSLYGVVHERLLAMYICAGRG 357
KN+ ++ + RLS ++ G S + L+ R
Sbjct: 650 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 709
Query: 358 LEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWL 417
EA+ EM++ G E + Y ++ + V LL + N K T + +
Sbjct: 710 EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 769
Query: 418 LRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAY 469
+ GY + G++ +A+ L +M + G+ P D + + + ++Q G +EA+
Sbjct: 770 IGGYARDGNVTEASRLLNEMREKGIVP---DSITYKEFIYGYLKQGGVLEAF 818
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 99/252 (39%), Gaps = 49/252 (19%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G+Y +A+ + + E G KP + +Y + LN FGK +
Sbjct: 222 GRYREAVNVFKKMEEDGCKPTLITYNVI-------LNVFGK-------------MGTPWN 261
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRG---LEAERQL 364
K L+EK +SD +A + + I C RG EA +
Sbjct: 262 KITSLVEKMKSDGIAPDAYTYNTLI-------------------TCCKRGSLHQEAAQVF 302
Query: 365 WEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKK-KTLSWLLRGYIK 423
EMK G D Y+ +L + + ++L+ + V+N T + L+ Y +
Sbjct: 303 EEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM-VLNGFSPSIVTYNSLISAYAR 361
Query: 424 GGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSL-I 482
G +++A E +M + G P+ +L G +++G VE+ +++ + + +
Sbjct: 362 DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF----ERAGKVESAMSIFEEMRNAGCKP 417
Query: 483 GPCLVYLYIKKY 494
C +IK Y
Sbjct: 418 NICTFNAFIKMY 429
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 80/212 (37%), Gaps = 37/212 (17%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
+G +A++L + E G KP+V++Y L+ G+ RAG +
Sbjct: 362 DGMLDEAMELKNQMAEKGTKPDVFTYTTLLS-----------------GFERAGKVESA- 403
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
+ + E+ ++ G + MY G+ E + E
Sbjct: 404 ---MSIFEE----------------MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
+ + G D ++ +LA+ S VS + ++ + +++T + L+ Y + G
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
A +MLD G+ P+ VL L +
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 42/171 (24%)
Query: 342 VVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSR 401
V + ++ Y AG+ +A +L +M+ G EAD Y ++ C + ++ + L
Sbjct: 258 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQE 317
Query: 402 IE-------------VMNSLCKKKTL----------------------SWLLRGYIKGGH 426
++ V+ LCK+ L + L+ GY K G
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEA---YLNLCK 474
+ DA L +M+D G P+ + V+ GL K +G VE Y + C+
Sbjct: 378 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK----NGRVEEALDYFHTCR 424
Score = 32.3 bits (72), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 83/238 (34%), Gaps = 47/238 (19%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G DAI+L+ + + G KP+V +Y + + G + G + E
Sbjct: 376 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVN-----------------GLCKNGRVEEA-- 416
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEM 367
L + D LA S S I G AGR EAER EM
Sbjct: 417 --LDYFHTCRFDGLAINSMFYSSLIDGLGK----------------AGRVDEAERLFEEM 458
Query: 368 KLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKK--TLSWLLRGYIKGG 425
G D Y+ ++ + L R+E C + T + LL G K
Sbjct: 459 SEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEG-CDQTVYTYTILLSGMFKEH 517
Query: 426 HINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIG 483
+A + M+D G+ P A + L + SG V CK L + + +G
Sbjct: 518 RNEEALKLWDMMIDKGITPT----AACFRALSTGLCLSGKVA---RACKILDELAPMG 568
>sp|Q5G1S8|PP241_ARATH Pentatricopeptide repeat-containing protein At3g18110,
chloroplastic OS=Arabidopsis thaliana GN=EMB1270 PE=2
SV=2
Length = 1440
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 157/391 (40%), Gaps = 82/391 (20%)
Query: 109 DRLSARELQLVLVYF----SQEGRDSWC-ALEVFEW--LKKENRVDNETMELMVSIMCSW 161
D L AR +Q+ + G++SW ALEVFEW L+ + + + ++ ++ W
Sbjct: 145 DILDARLVQMTPTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRW 204
Query: 162 ------VKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVK 215
V+ + E VGD V + M + +Y K +A V
Sbjct: 205 NQESLAVEIFTRAEPTVGDRVQVYNAM---------------MGVYSRSGKFSKAQELVD 249
Query: 216 AVLSRG-----IAYAE-GDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEV 269
A+ RG I++ + + GG T L A++L+ +R SGL+P+
Sbjct: 250 AMRQRGCVPDLISFNTLINARLKSGGLTPNL------------AVELLDMVRNSGLRPDA 297
Query: 270 YSYLIALTAVVKELNEFG--KALRKLKG----------------YVRAGSIAELDGKNLG 311
+Y L+A ++ N G K ++ Y R G AE + +
Sbjct: 298 ITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFME 357
Query: 312 L-IEKYQSDLLADGSRLSSWA--------------IQEGGSSLYGVVHERLLAMYICAGR 356
L ++ + D + S L ++A +Q+ G + + ++ MY G+
Sbjct: 358 LELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQ 417
Query: 357 GLEAERQLW-EMK-LVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
L+ QL+ +MK L G+ D Y +++ N + L+S + + +T
Sbjct: 418 -LDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTY 476
Query: 415 SWLLRGYIKGGHINDAAETLTKMLDLGLYPE 445
S L+ GY K G +A +T + ML G P+
Sbjct: 477 SALICGYAKAGKREEAEDTFSCMLRSGTKPD 507
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 51/205 (24%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G+ +A K+ ++ +G++P VY+Y I + A+ R G I+
Sbjct: 269 GEISEAEKVFKEMKLAGIEPNVYTYSIVIDALC-----------------RCGQISR--- 308
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEM 367
D+ AD + + G + + L+ +++ AGR + + +M
Sbjct: 309 ---------AHDVFAD--------MLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQM 351
Query: 368 KLVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNSLCKKK------TLSWLLRG 420
K +G E D Y+ ++ A C +N +AV +V+N++ KKK T + + R
Sbjct: 352 KKLGCEPDTITYNFLIEAHCRDENLENAV-------KVLNTMIKKKCEVNASTFNTIFRY 404
Query: 421 YIKGGHINDAAETLTKMLDLGLYPE 445
K +N A +KM++ P
Sbjct: 405 IEKKRDVNGAHRMYSKMMEAKCEPN 429
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 342 VVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL-AICASQNEGSAVSRLLS 400
+V+ L+ + AG EAE+ EMKL G E + Y IV+ A+C +SR
Sbjct: 256 IVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALC----RCGQISRAHD 311
Query: 401 RI-EVMNSLCKKKTLSW--LLRGYIKGGHINDAAETLTKMLDLGLYPE 445
++++S C +++ L+R ++K G + +M LG P+
Sbjct: 312 VFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPD 359
>sp|Q9C9U0|PP118_ARATH Pentatricopeptide repeat-containing protein At1g73710
OS=Arabidopsis thaliana GN=At1g73710 PE=2 SV=1
Length = 991
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%)
Query: 347 LLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMN 406
L+ +Y AGR +A EM G D ++ ++ C + S LL ++E
Sbjct: 311 LIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKG 370
Query: 407 SLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
KT + LL + G I A E K+ +GL+P+ + AVL L +R
Sbjct: 371 ISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQR 423
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%)
Query: 336 GSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAV 395
G +L V + LL++Y GR EA L EM VG + D Y+ +L Q + V
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 396 SRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQG 455
++ + ++ + L T S L+ GY KGG +A E + GL + + A++
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Query: 456 LRK 458
L K
Sbjct: 559 LCK 561
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 32/224 (14%)
Query: 253 AIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGL 312
A++++ + + GL+P+ Y + L A+ K GS+ E +
Sbjct: 186 AVEVLDEMPKYGLEPDEYVFGCLLDALCKN-----------------GSVKEASKVFEDM 228
Query: 313 IEKYQSDLLADGSRLSSWA--------------IQEGGSSLYGVVHERLLAMYICAGRGL 358
EK+ +L S L W ++E G VV LL+ Y AG+
Sbjct: 229 REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 359 EAERQLWEMKLVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWL 417
+A + +M+ G E + + Y +++ A+C ++ R+ +E T + L
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 418 LRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQ 461
+ G+ K G I+ L M G+ P + + ++ K+ Q
Sbjct: 349 ISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQ 392
Score = 40.4 bits (93), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 88/224 (39%), Gaps = 29/224 (12%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
GK DA L+ +R+ G +P V Y + + A+ + +A+R R G A+
Sbjct: 285 GKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD--- 341
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLY------GVVHERLLAMYICAGRGLEAE 361
I Y + + S W + + G S+ GV+ ++ M I E +
Sbjct: 342 -----IVTYTALI----SGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAH--EKK 390
Query: 362 RQLWE-------MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
Q E MK G D +Y++V+ + E RL + +E T
Sbjct: 391 EQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTF 450
Query: 415 SWLLRGYIKGGHINDAAETLTKMLDLGLY--PEYMDRVAVLQGL 456
++ G+ G + +A +M+ G++ P+Y ++L L
Sbjct: 451 VIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNL 494
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 40.4 bits (93), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 19/121 (15%)
Query: 173 GDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQ 232
D ++ L +M VGLKP +M +I+ Y + E+AV + + S G+
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK--------- 616
Query: 233 QGGPTGYLAWKMMVEG-----KYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFG 287
LA ++ + +A ++ +++E+G+KP+V +Y + A+++ +++F
Sbjct: 617 ----PSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR-VDKFQ 671
Query: 288 K 288
K
Sbjct: 672 K 672
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%)
Query: 342 VVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSR 401
V L+ + GR + AE M+ G Y+I++ Q + RLL +
Sbjct: 480 VTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGK 539
Query: 402 IEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQ 461
++ L T + L+ Y K G NDA E L +M +GL P A++ +R
Sbjct: 540 MKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGL 599
Query: 462 QSGNVEAY 469
V A+
Sbjct: 600 SEQAVNAF 607
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 32/151 (21%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGS------ 301
G+ ++A L LR+SG+KP +Y AL LKGYV+ G
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAY---------------NAL--LKGYVKTGPLKDAES 360
Query: 302 -IAELDGKNLG--------LIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYI 352
++E++ + + LI+ Y + + +R+ ++ G V RLLA +
Sbjct: 361 MVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFR 420
Query: 353 CAGRGLEAERQLWEMKLVGKEADGDLYDIVL 383
G + + L EMK +G + D Y++V+
Sbjct: 421 DRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI 451
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 39.7 bits (91), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 8/196 (4%)
Query: 264 GLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLAD 323
G VY++ I L + + L E GKA+ L+ R + ++ N + + L
Sbjct: 137 GFAFNVYNHNILLKGLCRNL-ECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 324 GSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL 383
L++ ++ G S V L+ + AG+ EA L EMK +G EAD +Y ++
Sbjct: 196 ALELAN-EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 384 ---AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDL 440
C + G A+ +E +S C T + L+RG+ K G + +A+E M++
Sbjct: 255 RGFCDCGELDRGKAL--FDEVLERGDSPC-AITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 441 GLYPEYMDRVAVLQGL 456
G+ P ++ GL
Sbjct: 312 GVRPNVYTYTGLIDGL 327
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 39.3 bits (90), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 355 GRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL 414
G+ +A L M G E D Y+ ++ NE + S + ++ S+C +
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCSPDVV 278
Query: 415 SW--LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQ------SGNV 466
++ ++ GY K G + +A+ L ML LG+YP + ++ G K + G +
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 467 EAYLNLCKRLSDTSLI-GPCLVYLYIKKYKLW 497
++ ++ TSLI G C V + ++LW
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLW 370
>sp|Q8GZ63|PP397_ARATH Pentatricopeptide repeat-containing protein At5g25630
OS=Arabidopsis thaliana GN=At5g25630 PE=2 SV=2
Length = 574
Score = 38.9 bits (89), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 53/122 (43%)
Query: 334 EGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGS 393
EG S +L+ + I GR EA+ + G Y +LA Q +
Sbjct: 38 EGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYG 97
Query: 394 AVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVL 453
++S ++S +E + + ++ + + G++ DA + L KM +LGL P ++
Sbjct: 98 SISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLI 157
Query: 454 QG 455
+G
Sbjct: 158 KG 159
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 35/229 (15%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
GKY AI L ++E G P + +Y + L K G++ RK+ G + E+
Sbjct: 224 GKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGK----MGRSWRKI-----LGVLDEMRS 274
Query: 308 KNLGLIEKYQSDLLADGSR-------------LSSWAIQEGGSSLYGVVHERLLAMYICA 354
K L E S +L+ +R L S + G V + LL ++ A
Sbjct: 275 KGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGT-----VTYNALLQVFGKA 329
Query: 355 GRGLEAERQLWEMKLVGKEADGDLYDIVLAI---CASQNEGSAVSRLLSRIEVM-NSLCK 410
G EA L EM+ AD Y+ ++A E + V ++++ VM N++
Sbjct: 330 GVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI-- 387
Query: 411 KKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
T + ++ Y K G ++A + M + G P AVL L K+
Sbjct: 388 --TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKK 434
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 34/53 (64%)
Query: 409 CKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQ 461
C T + ++ G +K G+IN A++ +++LDLG+ P+ + + ++ GL K+ Q
Sbjct: 728 CDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 96/255 (37%), Gaps = 34/255 (13%)
Query: 237 TGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVK------------ELN 284
T ++W +G A L L E GL P Y+Y + V K E+
Sbjct: 333 TSLISWNCR-KGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQ 391
Query: 285 EFGKALRK------LKGYVRAGSIAELDGKNLGLIEK-YQSDLLADGSRLSSWA------ 331
G + + + GY R G + E + +K +Q+D+ + S +
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 332 --------IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL 383
+ EGG L V + L+ +Y G EA+R EM G + + Y++++
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
Query: 384 AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLY 443
Q + +L + +E T + L+ G ++++A ++M GL
Sbjct: 512 YAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLD 571
Query: 444 PEYMDRVAVLQGLRK 458
+ ++ GL K
Sbjct: 572 QNSVTYTVMISGLSK 586
>sp|Q9FMU2|PP380_ARATH Pentatricopeptide repeat-containing protein At5g14080
OS=Arabidopsis thaliana GN=At5g14080 PE=2 SV=2
Length = 634
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 1/130 (0%)
Query: 347 LLAMYIC-AGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVM 405
L+ ++C AGR E+ L EMK G D LY+ ++ C +L + V
Sbjct: 402 LMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVE 461
Query: 406 NSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGN 465
T + L+R + G ++ KML+ G+ P+ +++++GL K +
Sbjct: 462 GCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAA 521
Query: 466 VEAYLNLCKR 475
+E + +R
Sbjct: 522 MEVFRKCMER 531
>sp|Q6NKW7|PP164_ARATH Pentatricopeptide repeat-containing protein At2g19280
OS=Arabidopsis thaliana GN=At2g19280 PE=2 SV=2
Length = 693
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 83/426 (19%), Positives = 151/426 (35%), Gaps = 64/426 (15%)
Query: 67 SVELDQFVTSDDEDEMSEEFFEA---------------IEELERMTREPSDILEEMNDRL 111
S ELDQ+ D++ EE +A +E R IL N
Sbjct: 104 STELDQYTVIRILDDLFEETLDASIVLYFFRWSELWIGVEHSSRSISRMIHILVSGNMNY 163
Query: 112 SARELQLVLVYFSQEGRDSWCAL--EVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEE 169
A ++ L LV S C + ++FE R+D +E + SI+ + E
Sbjct: 164 RAVDMLLCLVKKCSGEERSLCLVMKDLFE-----TRIDRRVLETVFSILIDCCIR----E 214
Query: 170 RGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDG 229
R V + L +D G+ P + ++ + E A FV+ +LSR G
Sbjct: 215 RKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSR--------G 266
Query: 230 EGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKE--LNEFG 287
K +G + +L++ ++ G++P++ ++ + + + K L E
Sbjct: 267 RHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEAT 326
Query: 288 KALRKLK----------------GYVRAGSIAELDG--------KNLGLIEKYQSDLLAD 323
L KLK G+ + G E N+ + + S++ +
Sbjct: 327 SVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICST 386
Query: 324 GSRLSSWA----IQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLY 379
G L + I E G V + ++ Y GR +A + + G
Sbjct: 387 GDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTS 446
Query: 380 DIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLD 439
I++ C+ S + ++ T + L+ GY K +N E + +M
Sbjct: 447 TILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRS 506
Query: 440 LGLYPE 445
G+ P+
Sbjct: 507 AGISPD 512
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 58/192 (30%)
Query: 115 ELQLVLVYFSQ---EGRDSWC--------------ALEVFEWLKKENRVDNETMELMVSI 157
L+L YF Q R SW +LE+F ++ + +E + V
Sbjct: 317 NLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLT 376
Query: 158 MCS---------WVKKYIEEERGVGDVV--DLLVDMDCVGLKPGFSMIEKVISLYWEMEK 206
C+ W+K YI++ + DVV + L+DM K G S EK ++ +M++
Sbjct: 377 ACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDM---YFKCGCS--EKAQKVFHDMDQ 431
Query: 207 KERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLK 266
+++ F + G+A +G+GQ+ AIK+ +++ ++
Sbjct: 432 RDK---FTWTAMVVGLA---NNGQGQE-------------------AIKVFFQMQDMSIQ 466
Query: 267 PEVYSYLIALTA 278
P+ +YL L+A
Sbjct: 467 PDDITYLGVLSA 478
>sp|Q13118|KLF10_HUMAN Krueppel-like factor 10 OS=Homo sapiens GN=KLF10 PE=1 SV=1
Length = 480
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 136 VFEWLKKENRVDNETMELMVSIMCSW---VKKYIEEERGVGDVVDLLVDMDCVGLKPGFS 192
++ W K + D E +E ++S+ CSW KKY+ E R V V DL + + + P F
Sbjct: 27 MYSWNKTAEKSDFEAVEALMSMSCSWKSDFKKYV-ENRPVTPVSDLSEEENLLPGTPDFH 85
Query: 193 MIE 195
I
Sbjct: 86 TIP 88
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 102/251 (40%), Gaps = 7/251 (2%)
Query: 245 MVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAE 304
++EG+ +A+ L + + GL+P+ +Y + A K + L+ R A+
Sbjct: 542 IMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP-TIGLQLFDLMQRNKISAD 600
Query: 305 LDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQL 364
+ N+ + ++ + D S+ + I EG V + ++ Y R EAER
Sbjct: 601 IAVCNVVIHLLFKCHRIEDASKFFNNLI-EGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659
Query: 365 WEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKG 424
+K+ + I++ + N+ R+ S + S T L+ + K
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 719
Query: 425 GHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGP 484
I + + +M + G+ P + ++ GL KR G V+ N+ + D L+
Sbjct: 720 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR----GRVDEATNIFHQAIDAKLLPD 775
Query: 485 CLVY-LYIKKY 494
+ Y + I+ Y
Sbjct: 776 VVAYAILIRGY 786
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 99/245 (40%), Gaps = 48/245 (19%)
Query: 252 DAIKLVIHLRESGLKPEVYSYLIALTAVVKELNE------FGKALRK------------L 293
+A+ LV + E+G+KP +++Y + + ++ + G+ L K +
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 294 KGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYIC 353
GY + G I + + ++E +S L+ +R + I+ S VH+ + +
Sbjct: 401 NGYCKRGMIEDA----VDVVELMESRKLSPNTRTYNELIKGYCKS---NVHKAMGVLNKM 453
Query: 354 AGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKT 413
R + + + + G+ G+ +D + + N+ V + +++SLCK K
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGN-FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 414 L----------------------SWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVA 451
+ + L+ GY K G +++A L KML P + A
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 452 VLQGL 456
++ GL
Sbjct: 573 LIHGL 577
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 64/341 (18%), Positives = 130/341 (38%), Gaps = 56/341 (16%)
Query: 126 EGRDSWCALEVFEWLKKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCV 185
+ D AL +F+ ++KE N + S++ W +K E E+ + + M+ +
Sbjct: 351 KNNDLVSALVLFDKMEKEGPSPNS---VTFSVLIEWFRKNGEMEKAL----EFYKKMEVL 403
Query: 186 GLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMM 245
GL P + +I + + +K E A+ G+A L+W +
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANV--------FVCNTILSW-LC 454
Query: 246 VEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAEL 305
+GK +A +L+ + G+ P V SY + G+ R
Sbjct: 455 KQGKTDEATELLSKMESRGIGPNVVSYNNVML-----------------GHCRQ------ 491
Query: 306 DGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW 365
KN+ L S++L G + +++ Y ++ + + LE +
Sbjct: 492 --KNMDLARIVFSNILEKGLKPNNYT--------YSILIDGCFRNHD-EQNALEVVNHMT 540
Query: 366 EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKK-KTLSWLLRGYIKG 424
+ E +G +Y ++ + S LL+ + LC + + ++ G+ K
Sbjct: 541 SSNI---EVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 597
Query: 425 GHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK--RIQQS 463
G ++ A +M G+ P + +++ GL K R+ Q+
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQA 638
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 409 CKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQ 461
C T + L+ G +K G++ A+E T+M +GL P+ + ++ GL K+ Q
Sbjct: 722 CDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 36.6 bits (83), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 63/280 (22%)
Query: 172 VGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEG 231
+G +D+L M G +P ++ + + +K +RA+ +++ ++SRG Y +
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG-CYPD----- 413
Query: 232 QQGGPTGYLAWKMMV-----EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEF 286
+ + M+ +GK DA++++ L G P LI V+ L +
Sbjct: 414 -------IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP----VLITYNTVIDGLAKA 462
Query: 287 GKALRKLKGYVRAGSIAELDGKNLGLIEKYQS-DLLADGSRLSSWAIQEGGSSLYGVVHE 345
GK GK + L+++ ++ DL D SS GG S G V
Sbjct: 463 GKT-----------------GKAIKLLDEMRAKDLKPDTITYSSLV---GGLSREGKVD- 501
Query: 346 RLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYD-IVLAICASQNEGSAVSRLLSRIEV 404
EA + E + +G + ++ I+L +C S+ A+ L + +
Sbjct: 502 -------------EAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL---VFM 545
Query: 405 MNSLCKKKTLSW--LLRGYIKGGHINDAAETLTKMLDLGL 442
+N CK S+ L+ G G +A E L ++ + GL
Sbjct: 546 INRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 36.2 bits (82), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 381 IVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDL 440
+V A+C +N+ + ++L I M + T + +L GY+ G + A L +MLD
Sbjct: 197 LVKALC-KKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR 255
Query: 441 GLYPEYMDRVAVLQGLRK--RIQQSGNV 466
G YP+ ++ G K R ++ V
Sbjct: 256 GWYPDATTYTVLMDGYCKLGRFSEAATV 283
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 348 LAMYICA-GRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMN 406
L ++C GR EA R+L++ G Y+ ++A + E + RL ++
Sbjct: 372 LIHWLCKEGRVTEA-RKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWD--DMYE 428
Query: 407 SLCKKKTLSW--LLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
CK ++ L+ G K G++ + L +ML++G +P + + +GL+K
Sbjct: 429 RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQK 482
>sp|Q9M2C8|PP291_ARATH Pentatricopeptide repeat-containing protein At3g61360
OS=Arabidopsis thaliana GN=At3g61360 PE=2 SV=1
Length = 498
Score = 36.2 bits (82), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 80/196 (40%), Gaps = 19/196 (9%)
Query: 94 ERMTREPSDILEEMNDRLSA--RELQLVLVYFSQEGRDSWCALEVFEWLKKENRVDNETM 151
ER +E I E+++ R + + + ++L+ F + G + L E +K+ + ++ T
Sbjct: 189 EREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTY 248
Query: 152 ELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAV 211
+ + C ++R G+ + L DMD + ++ +I K +A
Sbjct: 249 GIRIDGFC--------KKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKAR 300
Query: 212 LFVKAVLSRGIAYAEGDGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYS 271
+ RG+ G L +M G AIK++ + E G++P+ +
Sbjct: 301 QLFDEISKRGLT--------PDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVT 352
Query: 272 YLIALTAVVKELNEFG 287
+ ++K EFG
Sbjct: 353 FHSMFIGMMKS-KEFG 367
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 36.2 bits (82), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 73/380 (19%), Positives = 143/380 (37%), Gaps = 90/380 (23%)
Query: 126 EGRDSWCALEVFEWLKKEN-RVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVDMDC 184
+ R+++ A+ +F+ ++K VD T+ +++ C D VDL+ + C
Sbjct: 117 DARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACC--------------DRVDLIKQLHC 162
Query: 185 VGLKPGFS-----------------MIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEG 227
+ GF ++ + +S+++ M++ V + + +AY
Sbjct: 163 FSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMI----VAY--- 215
Query: 228 DGEGQQGGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFG 287
G+ ++G L +M+ +G +D L V + L +L ++ G
Sbjct: 216 -GQHKEGAKALALYKEMIFKGFKIDMFTLA----------SVLNALTSLDHLIGGRQFHG 264
Query: 288 KALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERL 347
K ++ G+ + + GLI+ Y DG S QE S V + +
Sbjct: 265 KLIKA--GFHQNSHVGS------GLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMI 316
Query: 348 LAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICAS--------QNEGSAVSRLL 399
+ EA + +M+ +G D + V + C++ Q G A+ +
Sbjct: 317 SGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHI 376
Query: 400 --SRIEVMNSLC----------------------KKKTLSWLLRGYIKGGHINDAAETLT 435
+RI V N+L + + +++GY + GH +A
Sbjct: 377 PSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQ 436
Query: 436 KMLDLGLYPEYMDRVAVLQG 455
+MLD G+ P + VAVL
Sbjct: 437 RMLDSGIAPNKITFVAVLSA 456
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 35.8 bits (81), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 413 TLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
TLS LL GY G I+DA + +M+++G P+ + ++ GL
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 35.8 bits (81), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 413 TLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
TLS LL GY G I+DA + +M+++G P+ + ++ GL
Sbjct: 82 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
>sp|A1AV74|HIS6_RUTMC Imidazole glycerol phosphate synthase subunit HisF OS=Ruthia
magnifica subsp. Calyptogena magnifica GN=hisF PE=3 SV=1
Length = 255
Score = 35.8 bits (81), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 161 WVKKYIEEERGVGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSR 220
W K + + G G+V LL MDC G+K GF ++ + K + V + S
Sbjct: 158 WAVKMTKGDNGAGEV--LLTSMDCDGVKTGFDLL---------LTKAASDAVDVPIIASG 206
Query: 221 GIAYAEGDGEGQ-QGGPTGYLAWKMMVEGKYV 251
G+ E EG QGG LA + G+Y
Sbjct: 207 GVGNLEHLSEGVLQGGADAVLAASIFHFGEYT 238
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 35.8 bits (81), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 352 ICAGRGLEAERQLWEMKL-VGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCK 410
+C R ++ +LW L G E D +++I++ S + +++ +E N
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 411 KKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
T + L+ G+ K G N A M +GL P+ + +++GL
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 35.8 bits (81), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 96/216 (44%), Gaps = 43/216 (19%)
Query: 252 DAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLG 311
DA++L ++ G+KP Y+Y++ ++ +GK+ S++ L+
Sbjct: 416 DALELFGNMESLGVKPTAYTYIVF-------IDYYGKS---------GDSVSALE----- 454
Query: 312 LIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVG 371
EK ++ +A I +SLY + AGR EA++ + +K +G
Sbjct: 455 TFEKMKTKGIAPN-------IVACNASLYSLAK---------AGRDREAKQIFYGLKDIG 498
Query: 372 KEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTL--SWLLRGYIKGGHIND 429
D Y++++ + E +LLS E+M + C+ + + L+ K +++
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLS--EMMENGCEPDVIVVNSLINTLYKADRVDE 556
Query: 430 AAETLTKMLDLGLYPEYMDRVAVLQGLRK--RIQQS 463
A + +M ++ L P + +L GL K +IQ++
Sbjct: 557 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
Query: 342 VVHERLLAMYICAGRGLEAERQLWE-MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLS 400
VV +L +C R L+ ++++E MK + D Y +L + + +V + S
Sbjct: 293 VVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWS 352
Query: 401 RIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRI 460
+E + T + L+ K G+ +A +TL M D G+ P ++ GL +
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 461 QQSGNVEAYLNL 472
+ +E + N+
Sbjct: 413 RLDDALELFGNM 424
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 35.8 bits (81), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 93/248 (37%), Gaps = 3/248 (1%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
E K A L ++E GL P V +Y + K FG+A + G + +
Sbjct: 371 EDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKA-GSFGRAYELMNLMGDEGFMPNIY 429
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWE 366
N + + + L + A G + GV + L+ +A
Sbjct: 430 TYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA-DGVTYTILIQEQCKQNDINQALAFFCR 488
Query: 367 MKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGH 426
M G EAD L +I++A Q + RL + + + K+T + ++ Y K G
Sbjct: 489 MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGD 548
Query: 427 INDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKR-LSDTSLIGPC 485
I+ A + M G P+ +++ GL K+ + Y + R LS +
Sbjct: 549 IDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVT 608
Query: 486 LVYLYIKK 493
L Y Y K+
Sbjct: 609 LAYEYCKR 616
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 43/100 (43%)
Query: 360 AERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLR 419
AE EM + G D Y +++ C + R L+ + + T + +L
Sbjct: 201 AENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILT 260
Query: 420 GYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKR 459
+ G +N A KM+DLG P ++ +++ GL K+
Sbjct: 261 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKK 300
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 35.8 bits (81), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 413 TLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
TLS LL GY G I+DA + +M+++G P+ + ++ GL
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 35.8 bits (81), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 6/197 (3%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDG 307
G +A+KLV +GL + +Y + A K E KA LK + G +
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS-GEMDKAQEILKEMLGKGLQPTIVT 563
Query: 308 KNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW-E 366
N+ + +L DG +L +W + +G + L+ Y C L+A ++ +
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP-NATTFNSLVKQY-CIRNNLKAATAIYKD 621
Query: 367 MKLVGKEADGDLY-DIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGG 425
M G DG Y ++V C ++N A L ++ T S L++G++K
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWF-LFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 426 HINDAAETLTKMLDLGL 442
+A E +M GL
Sbjct: 681 KFLEAREVFDQMRREGL 697
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 82/213 (38%), Gaps = 6/213 (2%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAG--SIAEL 305
G+ +A L++ + G P+V SY + + E K + ++ R G + +
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR-FGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 306 DGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW 365
G +GL+ + LA+ S I++G VV+ L+ + G A + +
Sbjct: 319 YGSIIGLLCRICK--LAEAEEAFSEMIRQGILP-DTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 366 EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGG 425
EM D Y +++ + +L + T + L+ GY K G
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 426 HINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
H+ DA M+ G P + ++ GL K
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 35.4 bits (80), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 97/247 (39%), Gaps = 38/247 (15%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
+G Y KL+ + G+KP VY Y I + + ++ N+ +A + + + G + L
Sbjct: 212 QGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD-NKMEEAEKMFELMKKHGVLPNL- 269
Query: 307 GKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYI-------------C 353
Y + DG + YG+ E L+A + C
Sbjct: 270 ---------YTYSAMIDG-----YCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFC 315
Query: 354 AGRGLEAERQLWEMKLVGKEADGDLY---DIVLAICASQNEGSAVSRLLSRIEVMNSLCK 410
R L R L+ + +V D +LY ++ C S N AV LLS +E +N
Sbjct: 316 KARELVTARSLF-VHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVG-LLSEMESLNLSPD 373
Query: 411 KKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYL 470
T + L+ G + +A KM + ++P +++ G K N+E L
Sbjct: 374 VFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY----NMEQAL 429
Query: 471 NLCKRLS 477
+LC ++
Sbjct: 430 DLCSEMT 436
>sp|Q9STK5|PP269_ARATH Pentatricopeptide repeat-containing protein At3g48250,
chloroplastic OS=Arabidopsis thaliana GN=At3g48250 PE=2
SV=1
Length = 621
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Query: 333 QEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYD-IVLAICASQNE 391
+ G SL V++ + GR EAE M+ G E D Y +V +C ++
Sbjct: 362 ESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRL 421
Query: 392 GSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGL 442
A +L ++E KT + L++G+ K ++ A ML+ G
Sbjct: 422 EEARG-VLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGF 471
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 408 LCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVE 467
L T + L+RG+ + G I +A+E +T+M+ G+ P+ + ++ L +R +E
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843
Query: 468 AYLNLCK------RLSDTSLIGPCLV 487
+ ++ + R++ +LI C V
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCV 869
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 342 VVHERLLAMYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL-AICASQNEGSAVSRLLS 400
+ + L+ + A + EAE EM++ G + Y+ ++ +C S+ A ++L+
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA-AQLMD 529
Query: 401 RIEVMNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRI 460
++ + K T + LL + +GG I AA+ + M G P+ + ++ GL K
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK-- 587
Query: 461 QQSGNVE 467
+G VE
Sbjct: 588 --AGRVE 592
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 310 LGLIEKY-QSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMK 368
L LIE Y Q +L + + W I E G + R+L + + E +M
Sbjct: 122 LILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMS 181
Query: 369 LVGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHI 427
+ G + D +++++ A+C + A+ +L + + +KT + +++GYI+ G +
Sbjct: 182 VWGIKPDVSTFNVLIKALCRAHQLRPAI-LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDL 240
Query: 428 NDAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGP 484
+ A +M++ G + ++ G K G VE LN + +S+ P
Sbjct: 241 DGALRIREQMVEFGCSWSNVSVNVIVHGFCKE----GRVEDALNFIQEMSNQDGFFP 293
>sp|Q9LUD6|PP230_ARATH Pentatricopeptide repeat-containing protein At3g14580,
mitochondrial OS=Arabidopsis thaliana GN=At3g14580 PE=2
SV=1
Length = 405
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 370 VGKEADGDLYDIVL-AICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYIKGGHIN 428
+G E D +I++ +C S N +A+ +LL S T S L+RG+ G
Sbjct: 196 LGVEIDACCLNILIKGLCESGNLEAAL-QLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFE 254
Query: 429 DAAETLTKMLDLGLYPEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRL 476
+A + L +M + P+ + ++ GLRK+ G VE ++L +R+
Sbjct: 255 EAFKLLERMEKERIEPDTITFNILISGLRKK----GRVEEGIDLLERM 298
>sp|Q9LN69|PPR50_ARATH Putative pentatricopeptide repeat-containing protein At1g19290
OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2
Length = 904
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 20/165 (12%)
Query: 332 IQEGGSSLYGVVHERLLAMYICAGRGLEAERQ---LWEMKLVGKEADGDLYDIVL-AICA 387
+ E G S V + L+ Y G EAE L E KLV AD +Y +++ C
Sbjct: 287 MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV---ADQHMYGVLMDGYCR 343
Query: 388 SQNEGSAVSRLLSRIEV----MNSLCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLY 443
+ AV + IE+ ++C L+ GY K G + +A + ++M D L
Sbjct: 344 TGQIRDAVRVHDNMIEIGVRTNTTICNS-----LINGYCKSGQLVEAEQIFSRMNDWSLK 398
Query: 444 PEYMDRVAVLQGLRKRIQQSGNVEAYLNLCKRLSDTSLIGPCLVY 488
P++ ++ G + +G V+ L LC ++ ++ + Y
Sbjct: 399 PDHHTYNTLVDGYCR----AGYVDEALKLCDQMCQKEVVPTVMTY 439
>sp|Q9LMH5|PPR42_ARATH Putative pentatricopeptide repeat-containing protein At1g13800
OS=Arabidopsis thaliana GN=At1g13800 PE=3 SV=1
Length = 883
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 86/225 (38%), Gaps = 22/225 (9%)
Query: 240 LAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELN------EFGKALRKL 293
L ++M +E DA +V+ + + G+ P+VY Y + K +N F K L+K
Sbjct: 301 LCYEMRIE----DAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKR 356
Query: 294 K--GYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMY 351
K V SI + + E Y DL + +E SL V +
Sbjct: 357 KRINCVIVSSILQCYCQMGNFSEAY--DLFKE--------FRETNISLDRVCYNVAFDAL 406
Query: 352 ICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKK 411
G+ EA EM G D Y ++ C Q + S L+ ++
Sbjct: 407 GKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDI 466
Query: 412 KTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGL 456
+ L G G +A ETL M + G+ P Y+ V++GL
Sbjct: 467 VIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGL 511
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 10/213 (4%)
Query: 247 EGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELD 306
EG D++++ + G P VY+ L +VVK E LK ++ ++
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS-GEDVSVWSFLKEMLKRKICPDVA 194
Query: 307 GKNLGLIEKYQSDLLADGS-RLSSWAIQEGGSSLYG---VVHERLLAMYICAGRGLEAER 362
N+ + + L A+GS SS+ +Q+ S Y V + +L Y GR A
Sbjct: 195 TFNILI-----NVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 249
Query: 363 QLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKKKTLSWLLRGYI 422
L MK G +AD Y++++ N + LL + + T + L+ G+
Sbjct: 250 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 309
Query: 423 KGGHINDAAETLTKMLDLGLYPEYMDRVAVLQG 455
G + A++ L +ML GL P ++ A++ G
Sbjct: 310 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG 342
>sp|Q9SJK9|PP189_ARATH Pentatricopeptide repeat-containing protein At2g36980,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E73 PE=2
SV=1
Length = 625
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 240 LAWKMMVE-----GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELN-EFGKALRKL 293
+AW M+ G + +AI L LR S KP+ YS+ L+ N +FG+ ++ L
Sbjct: 36 VAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSL 95
Query: 294 KGYVRAGSIAELDGKNLGLIEKY 316
+R+G A L N LI+ Y
Sbjct: 96 --VIRSGFCASLPVNN-SLIDMY 115
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 115/278 (41%), Gaps = 18/278 (6%)
Query: 172 VGDVVDLLVDMDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIAYAEGDGEG 231
VG +++L DM G KP ++ + ++ K + A VL+ E +G
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY----NVLN------EMSADG 454
Query: 232 QQGGPTGY--LAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKA 289
+ G+ L E + +A+++ + G KP+VY++ +L + + E++E A
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF-NSLISGLCEVDEIKHA 513
Query: 290 LRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLA 349
L L+ + G +A N + + + + +L + + + GS L + + L+
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ-GSPLDEITYNSLIK 572
Query: 350 MYICAGRGLEAERQLWEMKLVGKEADGDLYDIVL--AICASQNEGSAVSRLLSRIEVMNS 407
+C ++ R L+E L A ++ +L +C S AV + + S
Sbjct: 573 G-LCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV-EFQKEMVLRGS 630
Query: 408 LCKKKTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPE 445
T + L+ G + G I D K+ G+ P+
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/234 (18%), Positives = 95/234 (40%), Gaps = 31/234 (13%)
Query: 248 GKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKA--LRKLKGYVRAGSIAEL 305
G + +++ ++ SG P VY Y T ++ L +FG+ KL ++ ++
Sbjct: 595 GDITGSFRILELMKLSGCLPNVYPY----TIIINGLCQFGRVEEAEKLLSAMQDSGVSPN 650
Query: 306 DGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLW 365
+++ Y ++ D + + A+ E G L ++ LL ++ + +G++ +
Sbjct: 651 HVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEEST 710
Query: 366 EMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKK-------------- 411
+ +E D + + ++++ + G +S L I ++ LCK+
Sbjct: 711 VSDIALRETDPECINELISV--VEQLGGCISGLC--IFLVTRLCKEGRTDESNDLVQNVL 766
Query: 412 -------KTLSWLLRGYIKGGHINDAAETLTKMLDLGLYPEYMDRVAVLQGLRK 458
K + ++ Y E +T +L G P + V+QGL+K
Sbjct: 767 ERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKK 820
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 22/190 (11%)
Query: 240 LAWKMMVEGKYVD-----AIKLVIHLRESGLKPEVYSYLIALTAVVKELN-EFGKALRKL 293
++W M+ G + AI + ++ESGL+P +S +AL+A + G R +
Sbjct: 512 ISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIG---RTI 568
Query: 294 KGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLSSWAIQEGGSSLYG--VVHERLLAMY 351
GY+ I L +L IE D+ A ++ A + GS LY + +++ Y
Sbjct: 569 HGYI----IRNLQHSSLVSIETSLVDMYAKCGDINK-AEKVFGSKLYSELPLSNAMISAY 623
Query: 352 ICAGRGLEAERQLWEMKLVGKEADGDLYDIVLAICASQNEGSAVSRLLSRIEVMNSLCKK 411
G EA ++ VG + D VL+ C N +++ IE+ + K
Sbjct: 624 ALYGNLKEAIALYRSLEGVGLKPDNITITNVLSAC---NHAGDINQ---AIEIFTDIVSK 677
Query: 412 KTLSWLLRGY 421
+++ L Y
Sbjct: 678 RSMKPCLEHY 687
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 29/189 (15%)
Query: 123 FSQEGRDSWCALEVFEWL-KKENRVDNETMELMVSIMCSWVKKYIEEERGVGDVVDLLVD 181
++GR S A+E+FE + + R + T +++ +C +E+ + + V+LL
Sbjct: 272 LCKDGR-SLQAMELFEMMMARGCRPNMVTYTTLITGLC--------KEQKIQEAVELLDR 322
Query: 182 MDCVGLKPGFSMIEKVISLYWEMEKKERAVLFVKAVLSRGIA--------YAEGDGEGQQ 233
M+ GLKP + KVIS + + K A F+ ++ GI + + E +
Sbjct: 323 MNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVR 382
Query: 234 GGPTGYLAWKMMVEGKYVDAIKLVIHLRESGLKPEVYSYLIALTAVVKELNEFGKALRKL 293
G Y + A L + +R G+ EV + L +L + + EF KA++ +
Sbjct: 383 GLCANYPSR----------AFTLYLSMRSRGISVEVET-LESLVKCLCKKGEFQKAVQLV 431
Query: 294 KGYVRAGSI 302
V G I
Sbjct: 432 DEIVTDGCI 440
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 190,271,164
Number of Sequences: 539616
Number of extensions: 8142896
Number of successful extensions: 24910
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 24584
Number of HSP's gapped (non-prelim): 419
length of query: 502
length of database: 191,569,459
effective HSP length: 122
effective length of query: 380
effective length of database: 125,736,307
effective search space: 47779796660
effective search space used: 47779796660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)